BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= L18925.2.1
(1221 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BU979019.1|BU979019 HA14O21r HA Hordeum vulgare subsp. v... 436 e-121
gb|CA021258.1|CA021258 HZ39J06r HZ Hordeum vulgare subsp. v... 422 e-116
gb|BQ458971.1|BQ458971 HA02K21r HA Hordeum vulgare subsp. v... 420 e-116
gb|BU979487.1|BU979487 HA16F04r HA Hordeum vulgare subsp. v... 420 e-116
gb|CA025113.1|CA025113 HZ51D24r HZ Hordeum vulgare subsp. v... 353 9e-096
gb|AL506480.1|AL506480 AL506480 Hordeum vulgare Barke devel... 206 1e-051
gb|AL506894.1|AL506894 AL506894 Hordeum vulgare Barke devel... 206 1e-051
gb|AL507763.1|AL507763 AL507763 Hordeum vulgare Barke devel... 206 1e-051
gb|AL508019.1|AL508019 AL508019 Hordeum vulgare Barke devel... 206 1e-051
gb|AL509053.1|AL509053 AL509053 Hordeum vulgare Barke devel... 206 1e-051
gb|BE454695.2|BE454695 HVSMEh0095C18f Hordeum vulgare 5-45 ... 206 1e-051
gb|BG367358.1|BG367358 HVSMEi0011P20f Hordeum vulgare 20 DA... 206 1e-051
gb|BE454527.3|BE454527 HVSMEh0094C05f Hordeum vulgare 5-45 ... 206 1e-051
gb|BG414586.2|BG414586 HVSMEk0002P16f Hordeum vulgare testa... 206 1e-051
gb|BQ462735.1|BQ462735 HI01N16T HI Hordeum vulgare subsp. v... 206 1e-051
gb|BQ764786.1|BQ764786 EBca01_SQ004_L21_R carpel, pre-anthe... 206 1e-051
gb|BU969355.1|BU969355 HB11E16r BC Hordeum vulgare subsp. v... 206 1e-051
gb|BU973813.1|BU973813 HB26A20r BC Hordeum vulgare subsp. v... 206 1e-051
gb|BU996265.1|BU996265 HM13B01r HM Hordeum vulgare subsp. v... 206 1e-051
gb|CA024629.1|CA024629 HZ49N15r HZ Hordeum vulgare subsp. v... 206 1e-051
gb|CA025405.1|CA025405 HZ52B05r HZ Hordeum vulgare subsp. v... 206 1e-051
gb|CA025534.1|CA025534 HZ52G24r HZ Hordeum vulgare subsp. v... 206 1e-051
gb|CA025584.1|CA025584 HZ52J05r HZ Hordeum vulgare subsp. v... 206 1e-051
gb|CA028005.1|CA028005 HZ60L09r HZ Hordeum vulgare subsp. v... 206 1e-051
gb|CA028663.1|CA028663 HZ62N08r HZ Hordeum vulgare subsp. v... 206 1e-051
gb|CA029142.1|CA029142 HZ64F07r HZ Hordeum vulgare subsp. v... 204 5e-051
gb|CK125853.1|CK125853 BES1824111A1d09 BES1824 Hordeum vulg... 204 5e-051
gb|BM442374.2|BM442374 EBan01_SQ003_A06_R anther, yellow st... 198 3e-049
gb|AF486649.1| Hordeum vulgare subsp. vulgare AGAMOUS-like ... 198 3e-049
gb|BG344090.1|BG344090 HVSMEg0007K02f Hordeum vulgare pre-a... 196 1e-048
gb|AL506475.1|AL506475 AL506475 Hordeum vulgare Barke devel... 194 5e-048
gb|BU995356.1|BU995356 HM09P23r HM Hordeum vulgare subsp. v... 194 5e-048
gb|BU995744.1|BU995744 HM11D17r HM Hordeum vulgare subsp. v... 194 5e-048
gb|BU995877.1|BU995877 HM11K13r HM Hordeum vulgare subsp. v... 194 5e-048
gb|BU998535.1|BU998535 HI11F23r HI Hordeum vulgare subsp. v... 194 5e-048
gb|BU975486.1|BU975486 HB31F02r BC Hordeum vulgare subsp. v... 186 1e-045
gb|AF486648.1| Hordeum vulgare subsp. vulgare AGAMOUS-like ... 186 1e-045
gb|BM097203.2|BM097203 EBpi07_SQ002_L16_R pistil, 12 DPA, n... 184 5e-045
gb|BI948755.1|BI948755 HVSMEl0010L12f Hordeum vulgare spike... 180 7e-044
gb|CA026169.1|CA026169 HZ55C06r HZ Hordeum vulgare subsp. v... 176 1e-042
gb|BG417142.1|BG417142 HVSMEk0016H10f Hordeum vulgare testa... 170 7e-041
gb|BI948062.1|BI948062 HVSMEl0008A23f Hordeum vulgare spike... 168 3e-040
gb|CA021814.1|CA021814 HZ41D07r HZ Hordeum vulgare subsp. v... 157 1e-036
gb|BE195464.3|BE195464 HVSMEh0089L24f Hordeum vulgare 5-45 ... 147 1e-033
gb|BG415259.2|BG415259 HVSMEk0005M04f Hordeum vulgare testa... 147 1e-033
gb|BU982429.1|BU982429 HA26I11r HA Hordeum vulgare subsp. v... 147 1e-033
gb|BU984647.1|BU984647 HF04I23r HF Hordeum vulgare subsp. v... 139 2e-031
gb|CK124663.1|CK124663 BES1824109o14 BES1824 Hordeum vulgar... 139 2e-031
gb|AY541067.1| Hordeum vulgare subsp. vulgare AGAMOUS LIKE6... 139 2e-031
gb|BM373901.1|BM373901 EBma03_SQ003_B04_R maternal, 8 DPA, ... 133 2e-029
gb|BG418830.2|BG418830 HVSMEk0024K11f Hordeum vulgare testa... 129 2e-028
gb|BG417111.1|BG417111 HVSMEk0016F04f Hordeum vulgare testa... 123 1e-026
gb|BG414778.2|BG414778 HVSMEk0003L01f Hordeum vulgare testa... 121 6e-026
gb|BI956235.1|BI956235 HVSMEn0001F21f Hordeum vulgare rachi... 115 4e-024
emb|AJ249146.1|HVU249146 Hordeum vulgare mRNA for MADS-box ... 115 4e-024
gb|BE456120.2|BE456120 HVSMEg0019N18f Hordeum vulgare pre-a... 113 1e-023
gb|BE193581.2|BE193581 HVSMEh0081M10f Hordeum vulgare 5-45 ... 113 1e-023
gb|BU981579.1|BU981579 HA24A15r HA Hordeum vulgare subsp. v... 113 1e-023
gb|CA023514.1|CA023514 HZ46H17r HZ Hordeum vulgare subsp. v... 113 1e-023
gb|CA023749.1|CA023749 HZ47E18r HZ Hordeum vulgare subsp. v... 113 1e-023
emb|AJ249145.1|HVU249145 Hordeum vulgare mRNA for MADS-box ... 113 1e-023
gb|BU978508.1|BU978508 HA13H01r HA Hordeum vulgare subsp. v... 111 6e-023
gb|BU979387.1|BU979387 HA15P22r HA Hordeum vulgare subsp. v... 111 6e-023
gb|BU979781.1|BU979781 HA17E15r HA Hordeum vulgare subsp. v... 111 6e-023
gb|BU997161.1|BU997161 HI07B21r HI Hordeum vulgare subsp. v... 111 6e-023
gb|CA022702.1|CA022702 HZ44B21r HZ Hordeum vulgare subsp. v... 111 6e-023
gb|CA023382.1|CA023382 HZ46B02r HZ Hordeum vulgare subsp. v... 111 6e-023
gb|CA024068.1|CA024068 HZ48E09r HZ Hordeum vulgare subsp. v... 111 6e-023
gb|CA024560.1|CA024560 HZ49K11r HZ Hordeum vulgare subsp. v... 111 6e-023
gb|CA027865.1|CA027865 HZ60E08r HZ Hordeum vulgare subsp. v... 111 6e-023
gb|BI957545.1|BI957545 HVSMEn0010B09f Hordeum vulgare rachi... 107 9e-022
gb|BE194007.3|BE194007 HVSMEh0083F13f Hordeum vulgare 5-45 ... 107 9e-022
gb|BG414969.2|BG414969 HVSMEk0004I01f Hordeum vulgare testa... 107 9e-022
gb|CA026363.1|CA026363 HZ55L07r HZ Hordeum vulgare subsp. v... 103 1e-020
gb|BE193714.2|BE193714 HVSMEh0082E10f Hordeum vulgare 5-45 ... 101 5e-020
gb|BE195618.2|BE195618 HVSMEh0089O24f Hordeum vulgare 5-45 ... 101 5e-020
gb|AL508733.1|AL508733 AL508733 Hordeum vulgare Barke devel... 100 2e-019
gb|BF624256.3|BF624256 HVSMEa0013C13f Hordeum vulgare seedl... 100 2e-019
gb|BI957577.1|BI957577 HVSMEn0010D09f Hordeum vulgare rachi... 100 2e-019
gb|BF266152.2|BF266152 HV_CEa0014F03f Hordeum vulgare seedl... 100 2e-019
gb|BG418810.1|BG418810 HVSMEk0024I17f Hordeum vulgare testa... 100 2e-019
gb|BI958544.1|BI958544 HVSMEn0015I07f Hordeum vulgare rachi... 100 2e-019
gb|BE231150.2|BE231150 HVSMEg0017C04f Hordeum vulgare pre-a... 100 2e-019
gb|BG343946.2|BG343946 HVSMEg0007D05f Hordeum vulgare pre-a... 100 2e-019
gb|BM374839.1|BM374839 EBma05_SQ003_C14_R maternal, 12 DPA,... 100 2e-019
gb|AV932867.1|AV932867 AV932867 K. Sato unpublished cDNA li... 100 2e-019
gb|AV932969.1|AV932969 AV932969 K. Sato unpublished cDNA li... 100 2e-019
gb|AV933011.1|AV933011 AV933011 K. Sato unpublished cDNA li... 100 2e-019
gb|AV934186.1|AV934186 AV934186 K. Sato unpublished cDNA li... 100 2e-019
gb|BQ462520.1|BQ462520 HI01C12T HI Hordeum vulgare subsp. v... 100 2e-019
gb|BQ463844.1|BQ463844 HG01J20r HG Hordeum vulgare subsp. v... 100 2e-019
gb|BM376225.2|BM376225 EBma01_SQ002_L14_R maternal, 4 DPA, ... 100 2e-019
gb|BM096825.2|BM096825 EBma07_SQ001_M14_R maternal, 21 DPA,... 100 2e-019
gb|BM097091.2|BM097091 EBpi07_SQ002_F23_R pistil, 12 DPA, n... 100 2e-019
gb|BQ758398.1|BQ758398 EBma05_SQ001_L12_R maternal, 12 DPA,... 100 2e-019
gb|BU975559.1|BU975559 HB31I14r BC Hordeum vulgare subsp. v... 100 2e-019
gb|BU981382.1|BU981382 HA23H05r HA Hordeum vulgare subsp. v... 100 2e-019
gb|BU994410.1|BU994410 HM06P17r HM Hordeum vulgare subsp. v... 100 2e-019
gb|BU994511.1|BU994511 HM07E21r HM Hordeum vulgare subsp. v... 100 2e-019
gb|BU996042.1|BU996042 HM12D17r HM Hordeum vulgare subsp. v... 100 2e-019
gb|BU997618.1|BU997618 HI08I05r HI Hordeum vulgare subsp. v... 100 2e-019
gb|BU997970.1|BU997970 HI09J04r HI Hordeum vulgare subsp. v... 100 2e-019
gb|BU999147.1|BU999147 HI13G17r HI Hordeum vulgare subsp. v... 100 2e-019
gb|BU999207.1|BU999207 HI13L03r HI Hordeum vulgare subsp. v... 100 2e-019
gb|BU999601.1|BU999601 HI15A03r HI Hordeum vulgare subsp. v... 100 2e-019
gb|CA021239.1|CA021239 HZ39I09r HZ Hordeum vulgare subsp. v... 100 2e-019
gb|CA021403.1|CA021403 HZ39P24r HZ Hordeum vulgare subsp. v... 100 2e-019
gb|CA022102.1|CA022102 HZ42C18r HZ Hordeum vulgare subsp. v... 100 2e-019
gb|CA022365.1|CA022365 HZ42O13r HZ Hordeum vulgare subsp. v... 100 2e-019
gb|CA023726.1|CA023726 HZ47D14r HZ Hordeum vulgare subsp. v... 100 2e-019
gb|CA024361.1|CA024361 HZ49B13r HZ Hordeum vulgare subsp. v... 100 2e-019
gb|CA025109.1|CA025109 HZ51D19r HZ Hordeum vulgare subsp. v... 100 2e-019
gb|CA025481.1|CA025481 HZ52E16r HZ Hordeum vulgare subsp. v... 100 2e-019
gb|CA025884.1|CA025884 HZ53G19r HZ Hordeum vulgare subsp. v... 100 2e-019
gb|CA032046.1|CA032046 HX11N16r HX Hordeum vulgare subsp. v... 100 2e-019
gb|BJ547238.1|BJ547238 BJ547238 K. Sato unpublished cDNA li... 100 2e-019
gb|BJ547239.1|BJ547239 BJ547239 K. Sato unpublished cDNA li... 100 2e-019
gb|BJ547327.1|BJ547327 BJ547327 K. Sato unpublished cDNA li... 100 2e-019
gb|BJ547335.1|BJ547335 BJ547335 K. Sato unpublished cDNA li... 100 2e-019
gb|BJ547364.1|BJ547364 BJ547364 K. Sato unpublished cDNA li... 100 2e-019
gb|BJ547385.1|BJ547385 BJ547385 K. Sato unpublished cDNA li... 100 2e-019
gb|BJ547546.1|BJ547546 BJ547546 K. Sato unpublished cDNA li... 100 2e-019
gb|BJ547578.1|BJ547578 BJ547578 K. Sato unpublished cDNA li... 100 2e-019
gb|BJ547620.1|BJ547620 BJ547620 K. Sato unpublished cDNA li... 100 2e-019
gb|BJ547783.1|BJ547783 BJ547783 K. Sato unpublished cDNA li... 100 2e-019
gb|BJ547898.1|BJ547898 BJ547898 K. Sato unpublished cDNA li... 100 2e-019
gb|AV922660.2|AV922660 AV922660 K. Sato unpublished cDNA li... 100 2e-019
gb|CK123208.1|CK123208 BES1824102i20 BES1824 Hordeum vulgar... 100 2e-019
gb|AY541068.1| Hordeum vulgare subsp. vulgare AGAMOUS LIKE9... 100 2e-019
emb|AJ249143.1|HVU249143 Hordeum vulgare mRNA for MADS-box ... 100 2e-019
emb|AJ249147.1|HVU249147 Hordeum vulgare mRNA for MADS-box ... 100 2e-019
gb|AY758233.1| Hordeum vulgare subsp. vulgare cultivar More... 100 2e-019
gb|AY758235.1| Hordeum vulgare subsp. vulgare cultivar Igri... 100 2e-019
gb|AY758236.1| Hordeum vulgare subsp. vulgare cultivar Triu... 100 2e-019
gb|AY750995.1| Hordeum vulgare subsp. vulgare cultivar More... 100 2e-019
gb|AY785825.1| Hordeum vulgare subsp. vulgare cultivar More... 100 2e-019
gb|AY785826.1| Hordeum vulgare subsp. vulgare cultivar More... 100 2e-019
gb|AY785827.1| Hordeum vulgare subsp. vulgare cultivar 88Ab... 100 2e-019
gb|AY785828.1| Hordeum vulgare subsp. vulgare cultivar Dick... 100 2e-019
gb|AY785829.1| Hordeum vulgare subsp. vulgare cultivar Harr... 100 2e-019
gb|AY785830.1| Hordeum vulgare subsp. vulgare cultivar Stri... 100 2e-019
gb|AY785831.1| Hordeum vulgare subsp. vulgare cultivar Trem... 100 2e-019
gb|AY785833.1| Hordeum vulgare subsp. vulgare cultivar Igri... 100 2e-019
gb|AY785834.1| Hordeum vulgare subsp. vulgare cultivar Nure... 100 2e-019
gb|AY785835.1| Hordeum vulgare subsp. vulgare cultivar Komp... 100 2e-019
gb|AY866486.1| Hordeum vulgare subsp. vulgare cultivar Triu... 100 2e-019
gb|BQ470743.1|BQ470743 HX03O10r HX Hordeum vulgare subsp. v... 96 3e-018
gb|BI960528.1|BI960528 HVSMEn0024O19f Hordeum vulgare rachi... 94 1e-017
gb|BG418254.2|BG418254 HVSMEk0022B16f Hordeum vulgare testa... 94 1e-017
gb|BU995060.1|BU995060 HM09B05r HM Hordeum vulgare subsp. v... 94 1e-017
gb|CA024291.1|CA024291 HZ48O08r HZ Hordeum vulgare subsp. v... 94 1e-017
gb|BJ547237.1|BJ547237 BJ547237 K. Sato unpublished cDNA li... 94 1e-017
gb|BF622888.3|BF622888 HVSMEa0009O05f Hordeum vulgare seedl... 92 5e-017
gb|BF629182.3|BF629182 HVSMEb0010D12f Hordeum vulgare seedl... 92 5e-017
gb|BE194950.3|BE194950 HVSMEh0087M04f Hordeum vulgare 5-45 ... 92 5e-017
gb|BF264447.3|BF264447 HV_CEa0009H05f Hordeum vulgare seedl... 92 5e-017
gb|BQ459169.1|BQ459169 HA02B21r HA Hordeum vulgare subsp. v... 92 5e-017
gb|BM442365.2|BM442365 EBan01_SQ002_P21_R anther, yellow st... 92 5e-017
gb|BU973061.1|BU973061 HB23K04r BC Hordeum vulgare subsp. v... 92 5e-017
gb|CA009054.1|CA009054 HU13A17r HU Hordeum vulgare subsp. v... 92 5e-017
gb|CA009157.1|CA009157 HU13F11r HU Hordeum vulgare subsp. v... 92 5e-017
gb|CA027204.1|CA027204 HZ58D04r HZ Hordeum vulgare subsp. v... 92 5e-017
gb|CV056304.1|CV056304 BNEL16C1 Barley EST endosperm librar... 92 5e-017
emb|AJ249144.1|HVU249144 Hordeum vulgare mRNA for MADS-box ... 92 5e-017
gb|BU996011.1|BU996011 HM12B18r HM Hordeum vulgare subsp. v... 90 2e-016
gb|BG414398.1|BG414398 HVSMEk0002B05f Hordeum vulgare testa... 88 8e-016
gb|BF627401.2|BF627401 HVSMEb0004M05f Hordeum vulgare seedl... 86 3e-015
gb|BM442073.2|BM442073 EBan01_SQ002_B20_R anther, yellow st... 86 3e-015
gb|BI776503.2|BI776503 EBpi05_SQ001_K07_R pistil, 8 DPA, no... 86 3e-015
gb|BE194699.3|BE194699 HVSMEh0086I20f Hordeum vulgare 5-45 ... 84 1e-014
gb|BE196209.3|BE196209 HVSMEh0091K15f Hordeum vulgare 5-45 ... 84 1e-014
gb|BI776993.2|BI776993 EBpi03_SQ001_J15_R pistil, 4 DPA, no... 84 1e-014
gb|BU979939.1|BU979939 HA17O10r HA Hordeum vulgare subsp. v... 84 1e-014
gb|CA026975.1|CA026975 HZ57I06r HZ Hordeum vulgare subsp. v... 84 1e-014
gb|CA031703.1|CA031703 HX10O06r HX Hordeum vulgare subsp. v... 84 1e-014
gb|BF627446.2|BF627446 HVSMEb0004O03f Hordeum vulgare seedl... 80 2e-013
gb|BG367455.1|BG367455 HVSMEi0012F04f Hordeum vulgare 20 DA... 80 2e-013
gb|BQ764751.1|BQ764751 EBca01_SQ004_E21_R carpel, pre-anthe... 80 2e-013
gb|BU979626.1|BU979626 HA16M02r HA Hordeum vulgare subsp. v... 80 2e-013
gb|BU981513.1|BU981513 HA23N18r HA Hordeum vulgare subsp. v... 80 2e-013
emb|AJ249141.1|HVU249141 Hordeum vulgare mRNA for MADS-box ... 74 1e-011
emb|AJ249142.1|HVU249142 Hordeum vulgare mRNA for MADS-box ... 74 1e-011
gb|BG301340.1|BG301340 HVSMEb0020P03f Hordeum vulgare seedl... 70 2e-010
gb|BJ543924.1|BJ543924 BJ543924 K. Sato unpublished cDNA li... 66 3e-009
gb|BG365393.2|BG365393 HVSMEi0002I08f Hordeum vulgare 20 DA... 64 1e-008
gb|BI948719.1|BI948719 HVSMEl0010J18f Hordeum vulgare spike... 58 7e-007
gb|BU967322.1|BU967322 HB03O23r BC Hordeum vulgare subsp. v... 58 7e-007
gb|BU996044.1|BU996044 HM12D19r HM Hordeum vulgare subsp. v... 56 3e-006
gb|BG365779.1|BG365779 HVSMEi0004C18f Hordeum vulgare 20 DA... 50 2e-004
gb|BQ464802.1|BQ464802 HU01I23T HU Hordeum vulgare subsp. v... 50 2e-004
gb|BQ758741.1|BQ758741 EBma07_SQ002_M16_R maternal, 21 DPA,... 50 2e-004
gb|BQ758874.1|BQ758874 EBma07_SQ003_G06_R maternal, 21 DPA,... 50 2e-004
gb|BQ660301.1|BQ660301 HI01N16w HI Hordeum vulgare subsp. v... 48 7e-004
gb|BQ753907.1|BQ753907 EBca01_SQ002_D17_R carpel, pre-anthe... 46 0.003
gb|CA002368.1|CA002368 HS07E14r HS Hordeum vulgare subsp. v... 46 0.003
gb|CA004880.1|CA004880 HS18P07r HS Hordeum vulgare subsp. v... 46 0.003
gb|CA008106.1|CA008106 HU09O17r HU Hordeum vulgare subsp. v... 46 0.003
gb|BJ547458.1|BJ547458 BJ547458 K. Sato unpublished cDNA li... 46 0.003
gb|CK122890.1|CK122890 BES1824101b13 BES1824 Hordeum vulgar... 46 0.003
gb|AY785815.1| Hordeum vulgare subsp. vulgare cultivar More... 46 0.003
gb|AY785816.1| Hordeum vulgare subsp. vulgare cultivar Harr... 46 0.003
gb|AY785817.1| Hordeum vulgare subsp. vulgare cultivar Dick... 46 0.003
gb|AY785818.1| Hordeum vulgare subsp. vulgare cultivar 88Ab... 46 0.003
gb|AY785819.1| Hordeum vulgare subsp. vulgare cultivar Trem... 46 0.003
gb|AY785821.1| Hordeum vulgare subsp. vulgare cultivar Nure... 46 0.003
gb|AY785822.1| Hordeum vulgare subsp. vulgare cultivar Igri... 46 0.003
gb|AY785823.1| Hordeum vulgare subsp. vulgare cultivar Stri... 46 0.003
gb|AY785824.1| Hordeum vulgare subsp. vulgare cultivar Komp... 46 0.003
gb|AY866485.1| Hordeum vulgare subsp. vulgare cultivar Triu... 46 0.003
gb|BG310152.1|BG310152 HVSMEc0016P20f Hordeum vulgare seedl... 42 0.042
gb|BE455888.2|BE455888 HVSMEg0017B20f Hordeum vulgare pre-a... 42 0.042
gb|BI958127.1|BI958127 HVSMEn0013H24f Hordeum vulgare rachi... 42 0.042
gb|BQ462617.1|BQ462617 HI01H19T HI Hordeum vulgare subsp. v... 42 0.042
gb|BQ469990.1|BQ469990 HX01H06T HX Hordeum vulgare subsp. v... 42 0.042
gb|BU998520.1|BU998520 HI11F04r HI Hordeum vulgare subsp. v... 42 0.042
gb|CA022292.1|CA022292 HZ42L06r HZ Hordeum vulgare subsp. v... 42 0.042
gb|CA025681.1|CA025681 HZ52N13r HZ Hordeum vulgare subsp. v... 42 0.042
gb|CA032371.1|CA032371 HX12N03r HX Hordeum vulgare subsp. v... 42 0.042
gb|CK125530.1|CK125530 BES1824108p02 BES1824 Hordeum vulgar... 42 0.042
gb|AY541066.1| Hordeum vulgare subsp. vulgare PISTILLATA-li... 42 0.042
>gb|BU979019.1|BU979019 HA14O21r HA Hordeum vulgare subsp. vulgare cDNA clone HA14O21
5-PRIME, mRNA sequence
Length = 633
Score = 436 bits (220), Expect = e-121
Identities = 466/548 (85%)
Strand = Plus / Minus
Query: 557 acctgctgcagctgttgctctccctcctcaatcttggtcctgagggtcatgtggtcattc 616
|||| ||||| ||| ||||| |||||| |||||||||| ||||| |||| |||| ||
Sbjct: 618 accttctgcaactgctgctccccctccgcaatcttggttctgagatcaatgttgtcactc 559
Query: 617 tgaagctcagtctcccttttggccatgtaactgatctccgcagccagcagctcactcttc 676
|||||||| ||||||||||| ||||||| ||||||| || || |||||| |||||
Sbjct: 558 tgaagctctatctcccttttgaccatgtagttgatctcacaagataggagctcattcttc 499
Query: 677 ctggccctgatcttagagatgcctttctcaaggcggctctccagctgcttcagctccttg 736
|||||||||||||| | ||||||||||| |||||||| || ||||||||||||||||||
Sbjct: 498 ctggccctgatctttgcaatgcctttctcgaggcggctttcgagctgcttcagctccttg 439
Query: 737 agtgacaggtttcccacggagtcaccaaccaagtgcctgttagtgttttgcagcatctgg 796
||||| ||||| || || || ||||||||||||||| |||||||||||||||||||||||
Sbjct: 438 agtgataggttcccaacagaatcaccaaccaagtgcttgttagtgttttgcagcatctgg 379
Query: 797 atctggttgcgcagttttgctgattcttgctggtagaattgctgggcattgtgctctagg 856
||||||| ||||| ||||| | ||||||||||||| ||||||| |||||| |||| |
Sbjct: 378 atctggtggcgcatctttgcagtttcttgctggtagtattgctgagcattgacttctatg 319
Query: 857 agcgggggcccagaggaagagccaacggtgtgtgccttcttgtacctctcaacagtagcc 916
|| || | |||||||| |||||| | |||||||||||||||||||||| ||||||
Sbjct: 318 agaggtgccccagaggttgagccacaagcatgtgccttcttgtacctctcaattgtagcc 259
Query: 917 ttgacactgttgttggcatactcgtagaggcgaccacggctagagaagacgatgagggcc 976
|||||||||||||||| ||||| |||||||| || ||||| || ||||||||||| |||
Sbjct: 258 ttgacactgttgttggagtactcatagaggcggccgcggctggaaaagacgatgagcgcc 199
Query: 977 acctcagcgtcgcagaggacggagagctcgtacgccttcttgaggagcccattgcggcgc 1036
||||| |||||||| ||||||||||||||||| |||||||| | |||||| || ||||||
Sbjct: 198 acctcggcgtcgcacaggacggagagctcgtaggccttcttcaagagcccgttccggcgc 139
Query: 1037 ttgcagaaggtgacctgccggctcgtgttgttctcgatcctcttgatctcaatccttcct 1096
||||||||||| ||||| ||||| ||| | ||||| |||||||||||||||||||||||
Sbjct: 138 ttgcagaaggtcacctggcggctagtggtattctcaatcctcttgatctcaatccttccc 79
Query: 1097 ctacccat 1104
|| |||||
Sbjct: 78 ctccccat 71
>gb|CA021258.1|CA021258 HZ39J06r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ39J06
5-PRIME, mRNA sequence
Length = 607
Score = 422 bits (213), Expect = e-116
Identities = 453/533 (84%)
Strand = Plus / Minus
Query: 572 tgctctccctcctcaatcttggtcctgagggtcatgtggtcattctgaagctcagtctcc 631
||||| |||||| |||||||||| ||||| |||| |||| |||||||||| |||||
Sbjct: 600 tgctccccctccgcaatcttggttctgagatcaatgttgtcactctgaagctctatctcc 541
Query: 632 cttttggccatgtaactgatctccgcagccagcagctcactcttcctggccctgatctta 691
|||||| ||||||| ||||||| || || |||||| |||||||||||||||||||
Sbjct: 540 cttttgaccatgtagttgatctcacaagataggagctcattcttcctggccctgatcttt 481
Query: 692 gagatgcctttctcaaggcggctctccagctgcttcagctccttgagtgacaggtttccc 751
| ||||||||||| |||||||| || ||||||||||||||||||||||| ||||| ||
Sbjct: 480 gcaatgcctttctcgaggcggctttcgagctgcttcagctccttgagtgataggttccca 421
Query: 752 acggagtcaccaaccaagtgcctgttagtgttttgcagcatctggatctggttgcgcagt 811
|| || ||||||||||||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 420 acagaatcaccaaccaagtgcttgttagtgttttgcagcatctggatctggtggcgcatc 361
Query: 812 tttgctgattcttgctggtagaattgctgggcattgtgctctaggagcgggggcccagag 871
||||| | ||||||||||||| ||||||| |||||| |||| ||| || | |||||||
Sbjct: 360 tttgcagtttcttgctggtagtattgctgagcattgacttctatgagaggtgccccagag 301
Query: 872 gaagagccaacggtgtgtgccttcttgtacctctcaacagtagccttgacactgttgttg 931
| |||||| | |||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 300 gttgagccacaagcatgtgccttcttgtacctctcaattgtagccttgacactgttgttg 241
Query: 932 gcatactcgtagaggcgaccacggctagagaagacgatgagggccacctcagcgtcgcag 991
| ||||| |||||||| || ||||| || ||||||||||| |||||||| ||||||||
Sbjct: 240 gagtactcatagaggcggccgcggctggaaaagacgatgagcgccacctcggcgtcgcac 181
Query: 992 aggacggagagctcgtacgccttcttgaggagcccattgcggcgcttgcagaaggtgacc 1051
|||||| |||||||||| |||||||| | |||||| || ||||||||||||||||| |||
Sbjct: 180 aggacgtagagctcgtaggccttcttcaagagcccgttccggcgcttgcagaaggtcacc 121
Query: 1052 tgccggctcgtgttgttctcgatcctcttgatctcaatccttcctctacccat 1104
|| ||||| ||| | ||||| ||||||||||||||||||||||| || |||||
Sbjct: 120 tggcggctagtggtattctcaatcctcttgatctcaatccttcccctccccat 68
>gb|BQ458971.1|BQ458971 HA02K21r HA Hordeum vulgare subsp. vulgare cDNA clone HA02K21
5-PRIME, mRNA sequence
Length = 606
Score = 420 bits (212), Expect = e-116
Identities = 428/500 (85%)
Strand = Plus / Minus
Query: 605 atgtggtcattctgaagctcagtctcccttttggccatgtaactgatctccgcagccagc 664
|||| |||| |||||||||| ||||||||||| ||||||| ||||||| || ||
Sbjct: 599 atgttgtcactctgaagctctatctcccttttgaccatgtagttgatctcacaagatagg 540
Query: 665 agctcactcttcctggccctgatcttagagatgcctttctcaaggcggctctccagctgc 724
|||||| ||||||||||||||||||| | ||||||||||| |||||||| || ||||||
Sbjct: 539 agctcattcttcctggccctgatctttgcaatgcctttctcgaggcggctttcgagctgc 480
Query: 725 ttcagctccttgagtgacaggtttcccacggagtcaccaaccaagtgcctgttagtgttt 784
||||||||||||||||| ||||| || || || ||||||||||||||| |||||||||||
Sbjct: 479 ttcagctccttgagtgataggttcccaacagaatcaccaaccaagtgcttgttagtgttt 420
Query: 785 tgcagcatctggatctggttgcgcagttttgctgattcttgctggtagaattgctgggca 844
||||||||||||||||||| ||||| ||||| | ||||||||||||| ||||||| |||
Sbjct: 419 tgcagcatctggatctggtggcgcatctttgcagtttcttgctggtagtattgctgagca 360
Query: 845 ttgtgctctaggagcgggggcccagaggaagagccaacggtgtgtgccttcttgtacctc 904
||| |||| ||| || | |||||||| |||||| | ||||||||||||||||||
Sbjct: 359 ttgacttctatgagaggtgccccagaggttgagccacaagcatgtgccttcttgtacctc 300
Query: 905 tcaacagtagccttgacactgttgttggcatactcgtagaggcgaccacggctagagaag 964
|||| |||||||||||||||||||||| ||||| |||||||| || ||||| || |||
Sbjct: 299 tcaattgtagccttgacactgttgttggagtactcatagaggcggccgcggctggaaaag 240
Query: 965 acgatgagggccacctcagcgtcgcagaggacggagagctcgtacgccttcttgaggagc 1024
|||||||| |||||||| |||||||| ||||||||||||||||| |||||||| | ||||
Sbjct: 239 acgatgagcgccacctcggcgtcgcacaggacggagagctcgtaggccttcttcaagagc 180
Query: 1025 ccattgcggcgcttgcagaaggtgacctgccggctcgtgttgttctcgatcctcttgatc 1084
|| || ||||||||||||||||| ||||| ||||| ||| | ||||| ||||||||||||
Sbjct: 179 ccgttccggcgcttgcagaaggtcacctggcggctagtggtattctcaatcctcttgatc 120
Query: 1085 tcaatccttcctctacccat 1104
||||||||||| || |||||
Sbjct: 119 tcaatccttcccctccccat 100
>gb|BU979487.1|BU979487 HA16F04r HA Hordeum vulgare subsp. vulgare cDNA clone HA16F04
5-PRIME, mRNA sequence
Length = 629
Score = 420 bits (212), Expect = e-116
Identities = 428/500 (85%)
Strand = Plus / Minus
Query: 605 atgtggtcattctgaagctcagtctcccttttggccatgtaactgatctccgcagccagc 664
|||| |||| |||||||||| ||||||||||| ||||||| ||||||| || ||
Sbjct: 622 atgttgtcactctgaagctctatctcccttttgaccatgtagttgatctcacaagatagg 563
Query: 665 agctcactcttcctggccctgatcttagagatgcctttctcaaggcggctctccagctgc 724
|||||| ||||||||||||||||||| | ||||||||||| |||||||| || ||||||
Sbjct: 562 agctcattcttcctggccctgatctttgcaatgcctttctcgaggcggctttcgagctgc 503
Query: 725 ttcagctccttgagtgacaggtttcccacggagtcaccaaccaagtgcctgttagtgttt 784
||||||||||||||||| ||||| || || || ||||||||||||||| |||||||||||
Sbjct: 502 ttcagctccttgagtgataggttcccaacagaatcaccaaccaagtgcttgttagtgttt 443
Query: 785 tgcagcatctggatctggttgcgcagttttgctgattcttgctggtagaattgctgggca 844
||||||||||||||||||| ||||| ||||| | ||||||||||||| ||||||| |||
Sbjct: 442 tgcagcatctggatctggtggcgcatctttgcagtttcttgctggtagtattgctgagca 383
Query: 845 ttgtgctctaggagcgggggcccagaggaagagccaacggtgtgtgccttcttgtacctc 904
||| |||| ||| || | |||||||| |||||| | ||||||||||||||||||
Sbjct: 382 ttgacttctatgagaggtgccccagaggttgagccacaagcatgtgccttcttgtacctc 323
Query: 905 tcaacagtagccttgacactgttgttggcatactcgtagaggcgaccacggctagagaag 964
|||| |||||||||||||||||||||| ||||| |||||||| || ||||| || |||
Sbjct: 322 tcaattgtagccttgacactgttgttggagtactcatagaggcggccgcggctggaaaag 263
Query: 965 acgatgagggccacctcagcgtcgcagaggacggagagctcgtacgccttcttgaggagc 1024
|||||||| |||||||| |||||||| ||||||||||||||||| |||||||| | ||||
Sbjct: 262 acgatgagcgccacctcggcgtcgcacaggacggagagctcgtaggccttcttcaagagc 203
Query: 1025 ccattgcggcgcttgcagaaggtgacctgccggctcgtgttgttctcgatcctcttgatc 1084
|| || ||||||||||||||||| ||||| ||||| ||| | ||||| ||||||||||||
Sbjct: 202 ccgttccggcgcttgcagaaggtcacctggcggctagtggtattctcaatcctcttgatc 143
Query: 1085 tcaatccttcctctacccat 1104
||||||||||| || |||||
Sbjct: 142 tcaatccttcccctccccat 123
>gb|CA025113.1|CA025113 HZ51D24r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ51D24
5-PRIME, mRNA sequence
Length = 490
Score = 353 bits (178), Expect = 9e-096
Identities = 334/386 (86%)
Strand = Plus / Minus
Query: 719 agctgcttcagctccttgagtgacaggtttcccacggagtcaccaaccaagtgcctgtta 778
||||||||||||||||||||||| ||||| || || || ||||||||||||||| |||||
Sbjct: 488 agctgcttcagctccttgagtgataggttcccaacagaatcaccaaccaagtgcttgtta 429
Query: 779 gtgttttgcagcatctggatctggttgcgcagttttgctgattcttgctggtagaattgc 838
||||||||||||||||||||||||| ||||| ||||| | ||||||||||||| |||||
Sbjct: 428 gtgttttgcagcatctggatctggtggcgcatctttgcagtttcttgctggtagtattgc 369
Query: 839 tgggcattgtgctctaggagcgggggcccagaggaagagccaacggtgtgtgccttcttg 898
|| |||||| |||| ||| || | |||||||| |||||| | ||||||||||||
Sbjct: 368 tgagcattgacttctatgagaggtgccccagaggttgagccacaagcatgtgccttcttg 309
Query: 899 tacctctcaacagtagccttgacactgttgttggcatactcgtagaggcgaccacggcta 958
|||||||||| |||||||||||||||||||||| ||||| |||||||| || |||||
Sbjct: 308 tacctctcaattgtagccttgacactgttgttggagtactcatagaggcggccgcggctg 249
Query: 959 gagaagacgatgagggccacctcagcgtcgcagaggacggagagctcgtacgccttcttg 1018
|| ||||||||||| |||||||| |||||||| ||||||||||||||||| ||||||||
Sbjct: 248 gaaaagacgatgagcgccacctcggcgtcgcacaggacggagagctcgtaggccttcttc 189
Query: 1019 aggagcccattgcggcgcttgcagaaggtgacctgccggctcgtgttgttctcgatcctc 1078
| |||||| || ||||||||||||||||| ||||| ||||| ||| | ||||| ||||||
Sbjct: 188 aagagcccgttccggcgcttgcagaaggtcacctggcggctagtggtattctcaatcctc 129
Query: 1079 ttgatctcaatccttcctctacccat 1104
||||||||||||||||| || |||||
Sbjct: 128 ttgatctcaatccttcccctccccat 103
>gb|AL506480.1|AL506480 AL506480 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY03E14T 5',
mRNA sequence
Length = 700
Score = 206 bits (104), Expect = 1e-051
Identities = 188/216 (87%)
Strand = Plus / Minus
Query: 889 tgccttcttgtacctctcaacagtagccttgacactgttgttggcatactcgtagaggcg 948
|||||||||||| ||||||| || |||||||| |||||||||| ||||| ||||||||
Sbjct: 324 tgccttcttgtatctctcaatggttgccttgacgctgttgttggagtactcatagaggcg 265
Query: 949 accacggctagagaagacgatgagggccacctcagcgtcgcagaggacggagagctcgta 1008
|| ||||| || ||||||| ||| || ||||||||||||||||| || |||||||||||
Sbjct: 264 cccgcggctggaaaagacgacgagcgcgacctcagcgtcgcagagcaccgagagctcgta 205
Query: 1009 cgccttcttgaggagcccattgcggcgcttgcagaaggtgacctgccggctcgtgttgtt 1068
||||||||| ||||| || |||||||||||||||||||||||||||||| |||| ||||
Sbjct: 204 cgccttcttcaggagtccgttgcggcgcttgcagaaggtgacctgccggttcgtcgtgtt 145
Query: 1069 ctcgatcctcttgatctcaatccttcctctacccat 1104
|||||| | ||||||||| ||||| ||||| |||||
Sbjct: 144 ctcgatgcgcttgatctcgatcctccctctccccat 109
>gb|AL506894.1|AL506894 AL506894 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY04I23T 5',
mRNA sequence
Length = 700
Score = 206 bits (104), Expect = 1e-051
Identities = 188/216 (87%)
Strand = Plus / Minus
Query: 889 tgccttcttgtacctctcaacagtagccttgacactgttgttggcatactcgtagaggcg 948
|||||||||||| ||||||| || |||||||| |||||||||| ||||| ||||||||
Sbjct: 403 tgccttcttgtatctctcaatggttgccttgacgctgttgttggagtactcatagaggcg 344
Query: 949 accacggctagagaagacgatgagggccacctcagcgtcgcagaggacggagagctcgta 1008
|| ||||| || ||||||| ||| || ||||||||||||||||| || |||||||||||
Sbjct: 343 cccgcggctggaaaagacgacgagcgcgacctcagcgtcgcagagcaccgagagctcgta 284
Query: 1009 cgccttcttgaggagcccattgcggcgcttgcagaaggtgacctgccggctcgtgttgtt 1068
||||||||| ||||| || |||||||||||||||||||||||||||||| |||| ||||
Sbjct: 283 cgccttcttcaggagtccgttgcggcgcttgcagaaggtgacctgccggttcgtcgtgtt 224
Query: 1069 ctcgatcctcttgatctcaatccttcctctacccat 1104
|||||| | ||||||||| ||||| ||||| |||||
Sbjct: 223 ctcgatgcgcttgatctcgatcctccctctccccat 188
>gb|AL507763.1|AL507763 AL507763 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY06M13V 5',
mRNA sequence
Length = 700
Score = 206 bits (104), Expect = 1e-051
Identities = 188/216 (87%)
Strand = Plus / Minus
Query: 889 tgccttcttgtacctctcaacagtagccttgacactgttgttggcatactcgtagaggcg 948
|||||||||||| ||||||| || |||||||| |||||||||| ||||| ||||||||
Sbjct: 423 tgccttcttgtatctctcaatggttgccttgacgctgttgttggagtactcatagaggcg 364
Query: 949 accacggctagagaagacgatgagggccacctcagcgtcgcagaggacggagagctcgta 1008
|| ||||| || ||||||| ||| || ||||||||||||||||| || |||||||||||
Sbjct: 363 cccgcggctggaaaagacgacgagcgcgacctcagcgtcgcagagcaccgagagctcgta 304
Query: 1009 cgccttcttgaggagcccattgcggcgcttgcagaaggtgacctgccggctcgtgttgtt 1068
||||||||| ||||| || |||||||||||||||||||||||||||||| |||| ||||
Sbjct: 303 cgccttcttcaggagtccgttgcggcgcttgcagaaggtgacctgccggttcgtcgtgtt 244
Query: 1069 ctcgatcctcttgatctcaatccttcctctacccat 1104
|||||| | ||||||||| ||||| ||||| |||||
Sbjct: 243 ctcgatgcgcttgatctcgatcctccctctccccat 208
>gb|AL508019.1|AL508019 AL508019 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY07I15V 5',
mRNA sequence
Length = 700
Score = 206 bits (104), Expect = 1e-051
Identities = 188/216 (87%)
Strand = Plus / Minus
Query: 889 tgccttcttgtacctctcaacagtagccttgacactgttgttggcatactcgtagaggcg 948
|||||||||||| ||||||| || |||||||| |||||||||| ||||| ||||||||
Sbjct: 351 tgccttcttgtatctctcaatggttgccttgacgctgttgttggagtactcatagaggcg 292
Query: 949 accacggctagagaagacgatgagggccacctcagcgtcgcagaggacggagagctcgta 1008
|| ||||| || ||||||| ||| || ||||||||||||||||| || |||||||||||
Sbjct: 291 cccgcggctggaaaagacgacgagcgcgacctcagcgtcgcagagcaccgagagctcgta 232
Query: 1009 cgccttcttgaggagcccattgcggcgcttgcagaaggtgacctgccggctcgtgttgtt 1068
||||||||| ||||| || |||||||||||||||||||||||||||||| |||| ||||
Sbjct: 231 cgccttcttcaggagtccgttgcggcgcttgcagaaggtgacctgccggttcgtcgtgtt 172
Query: 1069 ctcgatcctcttgatctcaatccttcctctacccat 1104
|||||| | ||||||||| ||||| ||||| |||||
Sbjct: 171 ctcgatgcgcttgatctcgatcctccctctccccat 136
>gb|AL509053.1|AL509053 AL509053 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY10J07V 5',
mRNA sequence
Length = 700
Score = 206 bits (104), Expect = 1e-051
Identities = 188/216 (87%)
Strand = Plus / Minus
Query: 889 tgccttcttgtacctctcaacagtagccttgacactgttgttggcatactcgtagaggcg 948
|||||||||||| ||||||| || |||||||| |||||||||| ||||| ||||||||
Sbjct: 352 tgccttcttgtatctctcaatggttgccttgacgctgttgttggagtactcatagaggcg 293
Query: 949 accacggctagagaagacgatgagggccacctcagcgtcgcagaggacggagagctcgta 1008
|| ||||| || ||||||| ||| || ||||||||||||||||| || |||||||||||
Sbjct: 292 cccgcggctggaaaagacgacgagcgcgacctcagcgtcgcagagcaccgagagctcgta 233
Query: 1009 cgccttcttgaggagcccattgcggcgcttgcagaaggtgacctgccggctcgtgttgtt 1068
||||||||| ||||| || |||||||||||||||||||||||||||||| |||| ||||
Sbjct: 232 cgccttcttcaggagtccgttgcggcgcttgcagaaggtgacctgccggttcgtcgtgtt 173
Query: 1069 ctcgatcctcttgatctcaatccttcctctacccat 1104
|||||| | ||||||||| ||||| ||||| |||||
Sbjct: 172 ctcgatgcgcttgatctcgatcctccctctccccat 137
>gb|BE454695.2|BE454695 HVSMEh0095C18f Hordeum vulgare 5-45 DAP spike EST library HVcDNA0009
(5 to 45 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEh0095C18f, mRNA sequence
Length = 880
Score = 206 bits (104), Expect = 1e-051
Identities = 188/216 (87%)
Strand = Plus / Minus
Query: 889 tgccttcttgtacctctcaacagtagccttgacactgttgttggcatactcgtagaggcg 948
|||||||||||| ||||||| || |||||||| |||||||||| ||||| ||||||||
Sbjct: 347 tgccttcttgtatctctcaatggttgccttgacgctgttgttggagtactcatagaggcg 288
Query: 949 accacggctagagaagacgatgagggccacctcagcgtcgcagaggacggagagctcgta 1008
|| ||||| || ||||||| ||| || ||||||||||||||||| || |||||||||||
Sbjct: 287 cccgcggctggaaaagacgacgagcgcgacctcagcgtcgcagagcaccgagagctcgta 228
Query: 1009 cgccttcttgaggagcccattgcggcgcttgcagaaggtgacctgccggctcgtgttgtt 1068
||||||||| ||||| || |||||||||||||||||||||||||||||| |||| ||||
Sbjct: 227 cgccttcttcaggagtccgttgcggcgcttgcagaaggtgacctgccggttcgtcgtgtt 168
Query: 1069 ctcgatcctcttgatctcaatccttcctctacccat 1104
|||||| | ||||||||| ||||| ||||| |||||
Sbjct: 167 ctcgatgcgcttgatctcgatcctccctctccccat 132
>gb|BG367358.1|BG367358 HVSMEi0011P20f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0011P20f, mRNA sequence
Length = 512
Score = 206 bits (104), Expect = 1e-051
Identities = 188/216 (87%)
Strand = Plus / Minus
Query: 889 tgccttcttgtacctctcaacagtagccttgacactgttgttggcatactcgtagaggcg 948
|||||||||||| ||||||| || |||||||| |||||||||| ||||| ||||||||
Sbjct: 238 tgccttcttgtatctctcaatggttgccttgacgctgttgttggagtactcatagaggcg 179
Query: 949 accacggctagagaagacgatgagggccacctcagcgtcgcagaggacggagagctcgta 1008
|| ||||| || ||||||| ||| || ||||||||||||||||| || |||||||||||
Sbjct: 178 cccgcggctggaaaagacgacgagcgcgacctcagcgtcgcagagcaccgagagctcgta 119
Query: 1009 cgccttcttgaggagcccattgcggcgcttgcagaaggtgacctgccggctcgtgttgtt 1068
||||||||| ||||| || |||||||||||||||||||||||||||||| |||| ||||
Sbjct: 118 cgccttcttcaggagtccgttgcggcgcttgcagaaggtgacctgccggttcgtcgtgtt 59
Query: 1069 ctcgatcctcttgatctcaatccttcctctacccat 1104
|||||| | ||||||||| ||||| ||||| |||||
Sbjct: 58 ctcgatgcgcttgatctcgatcctccctctccccat 23
>gb|BE454527.3|BE454527 HVSMEh0094C05f Hordeum vulgare 5-45 DAP spike EST library HVcDNA0009
(5 to 45 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEh0094C05f, mRNA sequence
Length = 916
Score = 206 bits (104), Expect = 1e-051
Identities = 188/216 (87%)
Strand = Plus / Minus
Query: 889 tgccttcttgtacctctcaacagtagccttgacactgttgttggcatactcgtagaggcg 948
|||||||||||| ||||||| || |||||||| |||||||||| ||||| ||||||||
Sbjct: 306 tgccttcttgtatctctcaatggttgccttgacgctgttgttggagtactcatagaggcg 247
Query: 949 accacggctagagaagacgatgagggccacctcagcgtcgcagaggacggagagctcgta 1008
|| ||||| || ||||||| ||| || ||||||||||||||||| || |||||||||||
Sbjct: 246 cccgcggctggaaaagacgacgagcgcgacctcagcgtcgcagagcaccgagagctcgta 187
Query: 1009 cgccttcttgaggagcccattgcggcgcttgcagaaggtgacctgccggctcgtgttgtt 1068
||||||||| ||||| || |||||||||||||||||||||||||||||| |||| ||||
Sbjct: 186 cgccttcttcaggagtccgttgcggcgcttgcagaaggtgacctgccggttcgtcgtgtt 127
Query: 1069 ctcgatcctcttgatctcaatccttcctctacccat 1104
|||||| | ||||||||| ||||| ||||| |||||
Sbjct: 126 ctcgatgcgcttgatctcgatcctccctctccccat 91
>gb|BG414586.2|BG414586 HVSMEk0002P16f Hordeum vulgare testa/pericarp EST library HVcDNA0013
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEk0002P16f, mRNA sequence
Length = 804
Score = 206 bits (104), Expect = 1e-051
Identities = 188/216 (87%)
Strand = Plus / Minus
Query: 889 tgccttcttgtacctctcaacagtagccttgacactgttgttggcatactcgtagaggcg 948
|||||||||||| ||||||| || |||||||| |||||||||| ||||| ||||||||
Sbjct: 347 tgccttcttgtatctctcaatggttgccttgacgctgttgttggagtactcatagaggcg 288
Query: 949 accacggctagagaagacgatgagggccacctcagcgtcgcagaggacggagagctcgta 1008
|| ||||| || ||||||| ||| || ||||||||||||||||| || |||||||||||
Sbjct: 287 cccgcggctggaaaagacgacgagcgcgacctcagcgtcgcagagcaccgagagctcgta 228
Query: 1009 cgccttcttgaggagcccattgcggcgcttgcagaaggtgacctgccggctcgtgttgtt 1068
||||||||| ||||| || |||||||||||||||||||||||||||||| |||| ||||
Sbjct: 227 cgccttcttcaggagtccgttgcggcgcttgcagaaggtgacctgccggttcgtcgtgtt 168
Query: 1069 ctcgatcctcttgatctcaatccttcctctacccat 1104
|||||| | ||||||||| ||||| ||||| |||||
Sbjct: 167 ctcgatgcgcttgatctcgatcctccctctccccat 132
>gb|BQ462735.1|BQ462735 HI01N16T HI Hordeum vulgare subsp. vulgare cDNA clone HI01N16
5-PRIME, mRNA sequence
Length = 547
Score = 206 bits (104), Expect = 1e-051
Identities = 188/216 (87%)
Strand = Plus / Minus
Query: 889 tgccttcttgtacctctcaacagtagccttgacactgttgttggcatactcgtagaggcg 948
|||||||||||| ||||||| || |||||||| |||||||||| ||||| ||||||||
Sbjct: 360 tgccttcttgtatctctcaatggttgccttgacgctgttgttggagtactcatagaggcg 301
Query: 949 accacggctagagaagacgatgagggccacctcagcgtcgcagaggacggagagctcgta 1008
|| ||||| || ||||||| ||| || ||||||||||||||||| || |||||||||||
Sbjct: 300 cccgcggctggaaaagacgacgagcgcgacctcagcgtcgcagagcaccgagagctcgta 241
Query: 1009 cgccttcttgaggagcccattgcggcgcttgcagaaggtgacctgccggctcgtgttgtt 1068
||||||||| ||||| || |||||||||||||||||||||||||||||| |||| ||||
Sbjct: 240 cgccttcttcaggagtccgttgcggcgcttgcagaaggtgacctgccggttcgtcgtgtt 181
Query: 1069 ctcgatcctcttgatctcaatccttcctctacccat 1104
|||||| | ||||||||| ||||| ||||| |||||
Sbjct: 180 ctcgatgcgcttgatctcgatcctccctctccccat 145
>gb|BQ764786.1|BQ764786 EBca01_SQ004_L21_R carpel, pre-anthesis, no treatment, cv Optic,
EBca01 Hordeum vulgare subsp. vulgare cDNA clone
EBca01_SQ004_L21 5', mRNA sequence
Length = 719
Score = 206 bits (104), Expect = 1e-051
Identities = 188/216 (87%)
Strand = Plus / Minus
Query: 889 tgccttcttgtacctctcaacagtagccttgacactgttgttggcatactcgtagaggcg 948
|||||||||||| ||||||| || |||||||| |||||||||| ||||| ||||||||
Sbjct: 329 tgccttcttgtatctctcaatggttgccttgacgctgttgttggagtactcatagaggcg 270
Query: 949 accacggctagagaagacgatgagggccacctcagcgtcgcagaggacggagagctcgta 1008
|| ||||| || ||||||| ||| || ||||||||||||||||| || |||||||||||
Sbjct: 269 cccgcggctggaaaagacgacgagcgcgacctcagcgtcgcagagcaccgagagctcgta 210
Query: 1009 cgccttcttgaggagcccattgcggcgcttgcagaaggtgacctgccggctcgtgttgtt 1068
||||||||| ||||| || |||||||||||||||||||||||||||||| |||| ||||
Sbjct: 209 cgccttcttcaggagtccgttgcggcgcttgcagaaggtgacctgccggttcgtcgtgtt 150
Query: 1069 ctcgatcctcttgatctcaatccttcctctacccat 1104
|||||| | ||||||||| ||||| ||||| |||||
Sbjct: 149 ctcgatgcgcttgatctcgatcctccctctccccat 114
>gb|BU969355.1|BU969355 HB11E16r BC Hordeum vulgare subsp. vulgare cDNA clone HB11E16
5-PRIME, mRNA sequence
Length = 463
Score = 206 bits (104), Expect = 1e-051
Identities = 188/216 (87%)
Strand = Plus / Minus
Query: 889 tgccttcttgtacctctcaacagtagccttgacactgttgttggcatactcgtagaggcg 948
|||||||||||| ||||||| || |||||||| |||||||||| ||||| ||||||||
Sbjct: 366 tgccttcttgtatctctcaatggttgccttgacgctgttgttggagtactcatagaggcg 307
Query: 949 accacggctagagaagacgatgagggccacctcagcgtcgcagaggacggagagctcgta 1008
|| ||||| || ||||||| ||| || ||||||||||||||||| || |||||||||||
Sbjct: 306 cccgcggctggaaaagacgacgagcgcgacctcagcgtcgcagagcaccgagagctcgta 247
Query: 1009 cgccttcttgaggagcccattgcggcgcttgcagaaggtgacctgccggctcgtgttgtt 1068
||||||||| ||||| || |||||||||||||||||||||||||||||| |||| ||||
Sbjct: 246 cgccttcttcaggagtccgttgcggcgcttgcagaaggtgacctgccggttcgtcgtgtt 187
Query: 1069 ctcgatcctcttgatctcaatccttcctctacccat 1104
|||||| | ||||||||| ||||| ||||| |||||
Sbjct: 186 ctcgatgcgcttgatctcgatcctccctctccccat 151
>gb|BU973813.1|BU973813 HB26A20r BC Hordeum vulgare subsp. vulgare cDNA clone HB26A20
5-PRIME, mRNA sequence
Length = 554
Score = 206 bits (104), Expect = 1e-051
Identities = 188/216 (87%)
Strand = Plus / Minus
Query: 889 tgccttcttgtacctctcaacagtagccttgacactgttgttggcatactcgtagaggcg 948
|||||||||||| ||||||| || |||||||| |||||||||| ||||| ||||||||
Sbjct: 340 tgccttcttgtatctctcaatggttgccttgacgctgttgttggagtactcatagaggcg 281
Query: 949 accacggctagagaagacgatgagggccacctcagcgtcgcagaggacggagagctcgta 1008
|| ||||| || ||||||| ||| || ||||||||||||||||| || |||||||||||
Sbjct: 280 cccgcggctggaaaagacgacgagcgcgacctcagcgtcgcagagcaccgagagctcgta 221
Query: 1009 cgccttcttgaggagcccattgcggcgcttgcagaaggtgacctgccggctcgtgttgtt 1068
||||||||| ||||| || |||||||||||||||||||||||||||||| |||| ||||
Sbjct: 220 cgccttcttcaggagtccgttgcggcgcttgcagaaggtgacctgccggttcgtcgtgtt 161
Query: 1069 ctcgatcctcttgatctcaatccttcctctacccat 1104
|||||| | ||||||||| ||||| ||||| |||||
Sbjct: 160 ctcgatgcgcttgatctcgatcctccctctccccat 125
>gb|BU996265.1|BU996265 HM13B01r HM Hordeum vulgare subsp. vulgare cDNA clone HM13B01
5-PRIME, mRNA sequence
Length = 637
Score = 206 bits (104), Expect = 1e-051
Identities = 188/216 (87%)
Strand = Plus / Minus
Query: 889 tgccttcttgtacctctcaacagtagccttgacactgttgttggcatactcgtagaggcg 948
|||||||||||| ||||||| || |||||||| |||||||||| ||||| ||||||||
Sbjct: 355 tgccttcttgtatctctcaatggttgccttgacgctgttgttggagtactcatagaggcg 296
Query: 949 accacggctagagaagacgatgagggccacctcagcgtcgcagaggacggagagctcgta 1008
|| ||||| || ||||||| ||| || ||||||||||||||||| || |||||||||||
Sbjct: 295 cccgcggctggaaaagacgacgagcgcgacctcagcgtcgcagagcaccgagagctcgta 236
Query: 1009 cgccttcttgaggagcccattgcggcgcttgcagaaggtgacctgccggctcgtgttgtt 1068
||||||||| ||||| || |||||||||||||||||||||||||||||| |||| ||||
Sbjct: 235 cgccttcttcaggagtccgttgcggcgcttgcagaaggtgacctgccggttcgtcgtgtt 176
Query: 1069 ctcgatcctcttgatctcaatccttcctctacccat 1104
|||||| | ||||||||| ||||| ||||| |||||
Sbjct: 175 ctcgatgcgcttgatctcgatcctccctctccccat 140
>gb|CA024629.1|CA024629 HZ49N15r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ49N15
5-PRIME, mRNA sequence
Length = 633
Score = 206 bits (104), Expect = 1e-051
Identities = 188/216 (87%)
Strand = Plus / Minus
Query: 889 tgccttcttgtacctctcaacagtagccttgacactgttgttggcatactcgtagaggcg 948
|||||||||||| ||||||| || |||||||| |||||||||| ||||| ||||||||
Sbjct: 369 tgccttcttgtatctctcaatggttgccttgacgctgttgttggagtactcatagaggcg 310
Query: 949 accacggctagagaagacgatgagggccacctcagcgtcgcagaggacggagagctcgta 1008
|| ||||| || ||||||| ||| || ||||||||||||||||| || |||||||||||
Sbjct: 309 cccgcggctggaaaagacgacgagcgcgacctcagcgtcgcagagcaccgagagctcgta 250
Query: 1009 cgccttcttgaggagcccattgcggcgcttgcagaaggtgacctgccggctcgtgttgtt 1068
||||||||| ||||| || |||||||||||||||||||||||||||||| |||| ||||
Sbjct: 249 cgccttcttcaggagtccgttgcggcgcttgcagaaggtgacctgccggttcgtcgtgtt 190
Query: 1069 ctcgatcctcttgatctcaatccttcctctacccat 1104
|||||| | ||||||||| ||||| ||||| |||||
Sbjct: 189 ctcgatgcgcttgatctcgatcctccctctccccat 154
>gb|CA025405.1|CA025405 HZ52B05r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ52B05
5-PRIME, mRNA sequence
Length = 553
Score = 206 bits (104), Expect = 1e-051
Identities = 188/216 (87%)
Strand = Plus / Minus
Query: 889 tgccttcttgtacctctcaacagtagccttgacactgttgttggcatactcgtagaggcg 948
|||||||||||| ||||||| || |||||||| |||||||||| ||||| ||||||||
Sbjct: 319 tgccttcttgtatctctcaatggttgccttgacgctgttgttggagtactcatagaggcg 260
Query: 949 accacggctagagaagacgatgagggccacctcagcgtcgcagaggacggagagctcgta 1008
|| ||||| || ||||||| ||| || ||||||||||||||||| || |||||||||||
Sbjct: 259 cccgcggctggaaaagacgacgagcgcgacctcagcgtcgcagagcaccgagagctcgta 200
Query: 1009 cgccttcttgaggagcccattgcggcgcttgcagaaggtgacctgccggctcgtgttgtt 1068
||||||||| ||||| || |||||||||||||||||||||||||||||| |||| ||||
Sbjct: 199 cgccttcttcaggagtccgttgcggcgcttgcagaaggtgacctgccggttcgtcgtgtt 140
Query: 1069 ctcgatcctcttgatctcaatccttcctctacccat 1104
|||||| | ||||||||| ||||| ||||| |||||
Sbjct: 139 ctcgatgcgcttgatctcgatcctccctctccccat 104
>gb|CA025534.1|CA025534 HZ52G24r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ52G24
5-PRIME, mRNA sequence
Length = 542
Score = 206 bits (104), Expect = 1e-051
Identities = 188/216 (87%)
Strand = Plus / Minus
Query: 889 tgccttcttgtacctctcaacagtagccttgacactgttgttggcatactcgtagaggcg 948
|||||||||||| ||||||| || |||||||| |||||||||| ||||| ||||||||
Sbjct: 307 tgccttcttgtatctctcaatggttgccttgacgctgttgttggagtactcatagaggcg 248
Query: 949 accacggctagagaagacgatgagggccacctcagcgtcgcagaggacggagagctcgta 1008
|| ||||| || ||||||| ||| || ||||||||||||||||| || |||||||||||
Sbjct: 247 cccgcggctggaaaagacgacgagcgcgacctcagcgtcgcagagcaccgagagctcgta 188
Query: 1009 cgccttcttgaggagcccattgcggcgcttgcagaaggtgacctgccggctcgtgttgtt 1068
||||||||| ||||| || |||||||||||||||||||||||||||||| |||| ||||
Sbjct: 187 cgccttcttcaggagtccgttgcggcgcttgcagaaggtgacctgccggttcgtcgtgtt 128
Query: 1069 ctcgatcctcttgatctcaatccttcctctacccat 1104
|||||| | ||||||||| ||||| ||||| |||||
Sbjct: 127 ctcgatgcgcttgatctcgatcctccctctccccat 92
>gb|CA025584.1|CA025584 HZ52J05r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ52J05
5-PRIME, mRNA sequence
Length = 574
Score = 206 bits (104), Expect = 1e-051
Identities = 188/216 (87%)
Strand = Plus / Minus
Query: 889 tgccttcttgtacctctcaacagtagccttgacactgttgttggcatactcgtagaggcg 948
|||||||||||| ||||||| || |||||||| |||||||||| ||||| ||||||||
Sbjct: 339 tgccttcttgtatctctcaatggttgccttgacgctgttgttggagtactcatagaggcg 280
Query: 949 accacggctagagaagacgatgagggccacctcagcgtcgcagaggacggagagctcgta 1008
|| ||||| || ||||||| ||| || ||||||||||||||||| || |||||||||||
Sbjct: 279 cccgcggctggaaaagacgacgagcgcgacctcagcgtcgcagagcaccgagagctcgta 220
Query: 1009 cgccttcttgaggagcccattgcggcgcttgcagaaggtgacctgccggctcgtgttgtt 1068
||||||||| ||||| || |||||||||||||||||||||||||||||| |||| ||||
Sbjct: 219 cgccttcttcaggagtccgttgcggcgcttgcagaaggtgacctgccggttcgtcgtgtt 160
Query: 1069 ctcgatcctcttgatctcaatccttcctctacccat 1104
|||||| | ||||||||| ||||| ||||| |||||
Sbjct: 159 ctcgatgcgcttgatctcgatcctccctctccccat 124
>gb|CA028005.1|CA028005 HZ60L09r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ60L09
5-PRIME, mRNA sequence
Length = 479
Score = 206 bits (104), Expect = 1e-051
Identities = 188/216 (87%)
Strand = Plus / Minus
Query: 889 tgccttcttgtacctctcaacagtagccttgacactgttgttggcatactcgtagaggcg 948
|||||||||||| ||||||| || |||||||| |||||||||| ||||| ||||||||
Sbjct: 348 tgccttcttgtatctctcaatggttgccttgacgctgttgttggagtactcatagaggcg 289
Query: 949 accacggctagagaagacgatgagggccacctcagcgtcgcagaggacggagagctcgta 1008
|| ||||| || ||||||| ||| || ||||||||||||||||| || |||||||||||
Sbjct: 288 cccgcggctggaaaagacgacgagcgcgacctcagcgtcgcagagcaccgagagctcgta 229
Query: 1009 cgccttcttgaggagcccattgcggcgcttgcagaaggtgacctgccggctcgtgttgtt 1068
||||||||| ||||| || |||||||||||||||||||||||||||||| |||| ||||
Sbjct: 228 cgccttcttcaggagtccgttgcggcgcttgcagaaggtgacctgccggttcgtcgtgtt 169
Query: 1069 ctcgatcctcttgatctcaatccttcctctacccat 1104
|||||| | ||||||||| ||||| ||||| |||||
Sbjct: 168 ctcgatgcgcttgatctcgatcctccctctccccat 133
>gb|CA028663.1|CA028663 HZ62N08r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ62N08
5-PRIME, mRNA sequence
Length = 546
Score = 206 bits (104), Expect = 1e-051
Identities = 188/216 (87%)
Strand = Plus / Minus
Query: 889 tgccttcttgtacctctcaacagtagccttgacactgttgttggcatactcgtagaggcg 948
|||||||||||| ||||||| || |||||||| |||||||||| ||||| ||||||||
Sbjct: 360 tgccttcttgtatctctcaatggttgccttgacgctgttgttggagtactcatagaggcg 301
Query: 949 accacggctagagaagacgatgagggccacctcagcgtcgcagaggacggagagctcgta 1008
|| ||||| || ||||||| ||| || ||||||||||||||||| || |||||||||||
Sbjct: 300 cccgcggctggaaaagacgacgagcgcgacctcagcgtcgcagagcaccgagagctcgta 241
Query: 1009 cgccttcttgaggagcccattgcggcgcttgcagaaggtgacctgccggctcgtgttgtt 1068
||||||||| ||||| || |||||||||||||||||||||||||||||| |||| ||||
Sbjct: 240 cgccttcttcaggagtccgttgcggcgcttgcagaaggtgacctgccggttcgtcgtgtt 181
Query: 1069 ctcgatcctcttgatctcaatccttcctctacccat 1104
|||||| | ||||||||| ||||| ||||| |||||
Sbjct: 180 ctcgatgcgcttgatctcgatcctccctctccccat 145
>gb|CA029142.1|CA029142 HZ64F07r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ64F07
5-PRIME, mRNA sequence
Length = 336
Score = 204 bits (103), Expect = 5e-051
Identities = 187/215 (86%)
Strand = Plus / Minus
Query: 890 gccttcttgtacctctcaacagtagccttgacactgttgttggcatactcgtagaggcga 949
||||||||||| ||||||| || |||||||| |||||||||| ||||| ||||||||
Sbjct: 336 gccttcttgtatctctcaatggttgccttgacgctgttgttggagtactcatagaggcgc 277
Query: 950 ccacggctagagaagacgatgagggccacctcagcgtcgcagaggacggagagctcgtac 1009
|| ||||| || ||||||| ||| || ||||||||||||||||| || ||||||||||||
Sbjct: 276 ccgcggctggaaaagacgacgagcgcgacctcagcgtcgcagagcaccgagagctcgtac 217
Query: 1010 gccttcttgaggagcccattgcggcgcttgcagaaggtgacctgccggctcgtgttgttc 1069
|||||||| ||||| || |||||||||||||||||||||||||||||| |||| |||||
Sbjct: 216 gccttcttcaggagtccgttgcggcgcttgcagaaggtgacctgccggttcgtcgtgttc 157
Query: 1070 tcgatcctcttgatctcaatccttcctctacccat 1104
||||| | ||||||||| ||||| ||||| |||||
Sbjct: 156 tcgatgcgcttgatctcgatcctccctctccccat 122
>gb|CK125853.1|CK125853 BES1824111A1d09 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010D0911 5-PRIME, mRNA sequence
Length = 377
Score = 204 bits (103), Expect = 5e-051
Identities = 211/247 (85%)
Strand = Plus / Minus
Query: 557 acctgctgcagctgttgctctccctcctcaatcttggtcctgagggtcatgtggtcattc 616
|||| ||||| ||| ||||| |||||| |||||||||| ||||| |||| |||| ||
Sbjct: 263 accttctgcaactgctgctccccctccgcaatcttggttctgagatcaatgttgtcactc 204
Query: 617 tgaagctcagtctcccttttggccatgtaactgatctccgcagccagcagctcactcttc 676
|||||||| ||||||||||| ||||||| ||||||| || || |||||| |||||
Sbjct: 203 tgaagctctatctcccttttgaccatgtagttgatctcacaagataggagctcattcttc 144
Query: 677 ctggccctgatcttagagatgcctttctcaaggcggctctccagctgcttcagctccttg 736
|||||||||||||| | ||||||||||| |||||||| || ||||||||||||||||||
Sbjct: 143 ctggccctgatctttgcaatgcctttctcgaggcggctttcgagctgcttcagctccttg 84
Query: 737 agtgacaggtttcccacggagtcaccaaccaagtgcctgttagtgttttgcagcatctgg 796
||||| ||||| || || || ||||||||||||||| |||||||||||||||||||||||
Sbjct: 83 agtgataggttcccaacagaatcaccaaccaagtgcttgttagtgttttgcagcatctgg 24
Query: 797 atctggt 803
|||||||
Sbjct: 23 atctggt 17
>gb|BM442374.2|BM442374 EBan01_SQ003_A06_R anther, yellow stage, no treatment, cv Optic,
EBan01 Hordeum vulgare subsp. vulgare cDNA clone
EBan01_SQ003_A06 5', mRNA sequence
Length = 372
Score = 198 bits (100), Expect = 3e-049
Identities = 187/216 (86%)
Strand = Plus / Minus
Query: 889 tgccttcttgtacctctcaacagtagccttgacactgttgttggcatactcgtagaggcg 948
|||||||||||| ||||||| || |||||||| |||||||||| ||||| ||||||||
Sbjct: 328 tgccttcttgtatctctcaatggttgccttgacgctgttgttggagtactcatagaggcg 269
Query: 949 accacggctagagaagacgatgagggccacctcagcgtcgcagaggacggagagctcgta 1008
|| ||||| || ||||||| ||| || ||||||||||||||||| || |||||||||||
Sbjct: 268 cccgcggctggaaaagacgacgagcgcgacctcagcgtcgcagagcaccgagagctcgta 209
Query: 1009 cgccttcttgaggagcccattgcggcgcttgcagaaggtgacctgccggctcgtgttgtt 1068
||| ||||| ||||| || |||||||||||||||||||||||||||||| |||| ||||
Sbjct: 208 cgctttcttcaggagtccgttgcggcgcttgcagaaggtgacctgccggttcgtcgtgtt 149
Query: 1069 ctcgatcctcttgatctcaatccttcctctacccat 1104
|||||| | ||||||||| ||||| ||||| |||||
Sbjct: 148 ctcgatgcgcttgatctcgatcctccctctccccat 113
>gb|AF486649.1| Hordeum vulgare subsp. vulgare AGAMOUS-like protein 2 HvAG2 (AG2)
mRNA, complete cds
Length = 1068
Score = 198 bits (100), Expect = 3e-049
Identities = 187/216 (86%)
Strand = Plus / Minus
Query: 889 tgccttcttgtacctctcaacagtagccttgacactgttgttggcatactcgtagaggcg 948
|||||||||||| ||||||| || |||||||| |||||||||| ||||| ||||||||
Sbjct: 305 tgccttcttgtatctctcaatggttgccttgacgctgttgttggagtactcatagaggcg 246
Query: 949 accacggctagagaagacgatgagggccacctcagcgtcgcagaggacggagagctcgta 1008
|| ||||| || ||||||| ||| || ||||||||||||||||| || |||||||||||
Sbjct: 245 cccgcggctggaaaagacgacgagcgcgacctcagcgtcgcagagcaccgagagctcgta 186
Query: 1009 cgccttcttgaggagcccattgcggcgcttgcagaaggtgacctgccggctcgtgttgtt 1068
||||||||| ||||| || |||||||||||||||||||||| ||||||| |||| ||||
Sbjct: 185 cgccttcttcaggagtccgttgcggcgcttgcagaaggtgagctgccggttcgtcgtgtt 126
Query: 1069 ctcgatcctcttgatctcaatccttcctctacccat 1104
|||||| | ||||||||| ||||| ||||| |||||
Sbjct: 125 ctcgatgcgcttgatctcgatcctccctctccccat 90
>gb|BG344090.1|BG344090 HVSMEg0007K02f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0007K02f, mRNA sequence
Length = 832
Score = 196 bits (99), Expect = 1e-048
Identities = 177/203 (87%)
Strand = Plus / Minus
Query: 889 tgccttcttgtacctctcaacagtagccttgacactgttgttggcatactcgtagaggcg 948
|||||||||||| ||||||| || |||||||| |||||||||| ||||| ||||||||
Sbjct: 203 tgccttcttgtatctctcaatggttgccttgacgctgttgttggagtactcatagaggcg 144
Query: 949 accacggctagagaagacgatgagggccacctcagcgtcgcagaggacggagagctcgta 1008
|| ||||| || ||||||| ||| || ||||||||||||||||| || |||||||||||
Sbjct: 143 cccgcggctggaaaagacgacgagcgcgacctcagcgtcgcagagcaccgagagctcgta 84
Query: 1009 cgccttcttgaggagcccattgcggcgcttgcagaaggtgacctgccggctcgtgttgtt 1068
||||||||| ||||| || |||||||||||||||||||||||||||||| |||| ||||
Sbjct: 83 cgccttcttcaggagtccgttgcggcgcttgcagaaggtgacctgccggttcgtcgtgtt 24
Query: 1069 ctcgatcctcttgatctcaatcc 1091
|||||| | ||||||||| ||||
Sbjct: 23 ctcgatgcgcttgatctcgatcc 1
>gb|AL506475.1|AL506475 AL506475 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY03E09T 5',
mRNA sequence
Length = 673
Score = 194 bits (98), Expect = 5e-048
Identities = 176/202 (87%)
Strand = Plus / Minus
Query: 890 gccttcttgtacctctcaacagtagccttgacactgttgttggcatactcgtagaggcga 949
||||| ||||||||||||| || || || ||||||||||| | ||||||||||||||
Sbjct: 410 gcctttttgtacctctcaatggtggctttcacactgttgtttgagtactcgtagaggcgg 351
Query: 950 ccacggctagagaagacgatgagggccacctcagcgtcgcagaggacggagagctcgtac 1009
|| ||||| |||||||||| |||||| ||||| ||||| ||||| || ||||||||||||
Sbjct: 350 ccgcggctggagaagacgacgagggcgacctcggcgtcacagagcaccgagagctcgtac 291
Query: 1010 gccttcttgaggagcccattgcggcgcttgcagaaggtgacctgccggctcgtgttgttc 1069
|||||||||||||| || |||||||||||||||||||||||||||||| | ||| |||||
Sbjct: 290 gccttcttgaggaggccgttgcggcgcttgcagaaggtgacctgccggttggtggtgttc 231
Query: 1070 tcgatcctcttgatctcaatcc 1091
||||| | ||||||||| ||||
Sbjct: 230 tcgatgcgcttgatctcgatcc 209
>gb|BU995356.1|BU995356 HM09P23r HM Hordeum vulgare subsp. vulgare cDNA clone HM09P23
5-PRIME, mRNA sequence
Length = 628
Score = 194 bits (98), Expect = 5e-048
Identities = 176/202 (87%)
Strand = Plus / Minus
Query: 890 gccttcttgtacctctcaacagtagccttgacactgttgttggcatactcgtagaggcga 949
||||| ||||||||||||| || || || ||||||||||| | ||||||||||||||
Sbjct: 359 gcctttttgtacctctcaatggtggctttcacactgttgtttgagtactcgtagaggcgg 300
Query: 950 ccacggctagagaagacgatgagggccacctcagcgtcgcagaggacggagagctcgtac 1009
|| ||||| |||||||||| |||||| ||||| ||||| ||||| || ||||||||||||
Sbjct: 299 ccgcggctggagaagacgacgagggcgacctcggcgtcacagagcaccgagagctcgtac 240
Query: 1010 gccttcttgaggagcccattgcggcgcttgcagaaggtgacctgccggctcgtgttgttc 1069
|||||||||||||| || |||||||||||||||||||||||||||||| | ||| |||||
Sbjct: 239 gccttcttgaggaggccgttgcggcgcttgcagaaggtgacctgccggttggtggtgttc 180
Query: 1070 tcgatcctcttgatctcaatcc 1091
||||| | ||||||||| ||||
Sbjct: 179 tcgatgcgcttgatctcgatcc 158
>gb|BU995744.1|BU995744 HM11D17r HM Hordeum vulgare subsp. vulgare cDNA clone HM11D17
5-PRIME, mRNA sequence
Length = 624
Score = 194 bits (98), Expect = 5e-048
Identities = 176/202 (87%)
Strand = Plus / Minus
Query: 890 gccttcttgtacctctcaacagtagccttgacactgttgttggcatactcgtagaggcga 949
||||| ||||||||||||| || || || ||||||||||| | ||||||||||||||
Sbjct: 423 gcctttttgtacctctcaatggtggctttcacactgttgtttgagtactcgtagaggcgg 364
Query: 950 ccacggctagagaagacgatgagggccacctcagcgtcgcagaggacggagagctcgtac 1009
|| ||||| |||||||||| |||||| ||||| ||||| ||||| || ||||||||||||
Sbjct: 363 ccgcggctggagaagacgacgagggcgacctcggcgtcacagagcaccgagagctcgtac 304
Query: 1010 gccttcttgaggagcccattgcggcgcttgcagaaggtgacctgccggctcgtgttgttc 1069
|||||||||||||| || |||||||||||||||||||||||||||||| | ||| |||||
Sbjct: 303 gccttcttgaggaggccgttgcggcgcttgcagaaggtgacctgccggttggtggtgttc 244
Query: 1070 tcgatcctcttgatctcaatcc 1091
||||| | ||||||||| ||||
Sbjct: 243 tcgatgcgcttgatctcgatcc 222
>gb|BU995877.1|BU995877 HM11K13r HM Hordeum vulgare subsp. vulgare cDNA clone HM11K13
5-PRIME, mRNA sequence
Length = 568
Score = 194 bits (98), Expect = 5e-048
Identities = 176/202 (87%)
Strand = Plus / Minus
Query: 890 gccttcttgtacctctcaacagtagccttgacactgttgttggcatactcgtagaggcga 949
||||| ||||||||||||| || || || ||||||||||| | ||||||||||||||
Sbjct: 423 gcctttttgtacctctcaatggtggctttcacactgttgtttgagtactcgtagaggcgg 364
Query: 950 ccacggctagagaagacgatgagggccacctcagcgtcgcagaggacggagagctcgtac 1009
|| ||||| |||||||||| |||||| ||||| ||||| ||||| || ||||||||||||
Sbjct: 363 ccgcggctggagaagacgacgagggcgacctcggcgtcacagagcaccgagagctcgtac 304
Query: 1010 gccttcttgaggagcccattgcggcgcttgcagaaggtgacctgccggctcgtgttgttc 1069
|||||||||||||| || |||||||||||||||||||||||||||||| | ||| |||||
Sbjct: 303 gccttcttgaggaggccgttgcggcgcttgcagaaggtgacctgccggttggtggtgttc 244
Query: 1070 tcgatcctcttgatctcaatcc 1091
||||| | ||||||||| ||||
Sbjct: 243 tcgatgcgcttgatctcgatcc 222
>gb|BU998535.1|BU998535 HI11F23r HI Hordeum vulgare subsp. vulgare cDNA clone HI11F23
5-PRIME, mRNA sequence
Length = 580
Score = 194 bits (98), Expect = 5e-048
Identities = 176/202 (87%)
Strand = Plus / Minus
Query: 890 gccttcttgtacctctcaacagtagccttgacactgttgttggcatactcgtagaggcga 949
||||| ||||||||||||| || || || ||||||||||| | ||||||||||||||
Sbjct: 423 gcctttttgtacctctcaatggtggctttcacactgttgtttgagtactcgtagaggcgg 364
Query: 950 ccacggctagagaagacgatgagggccacctcagcgtcgcagaggacggagagctcgtac 1009
|| ||||| |||||||||| |||||| ||||| ||||| ||||| || ||||||||||||
Sbjct: 363 ccgcggctggagaagacgacgagggcgacctcggcgtcacagagcaccgagagctcgtac 304
Query: 1010 gccttcttgaggagcccattgcggcgcttgcagaaggtgacctgccggctcgtgttgttc 1069
|||||||||||||| || |||||||||||||||||||||||||||||| | ||| |||||
Sbjct: 303 gccttcttgaggaggccgttgcggcgcttgcagaaggtgacctgccggttggtggtgttc 244
Query: 1070 tcgatcctcttgatctcaatcc 1091
||||| | ||||||||| ||||
Sbjct: 243 tcgatgcgcttgatctcgatcc 222
>gb|BU975486.1|BU975486 HB31F02r BC Hordeum vulgare subsp. vulgare cDNA clone HB31F02
5-PRIME, mRNA sequence
Length = 501
Score = 186 bits (94), Expect = 1e-045
Identities = 163/186 (87%)
Strand = Plus / Minus
Query: 889 tgccttcttgtacctctcaacagtagccttgacactgttgttggcatactcgtagaggcg 948
|||||||||||| ||||||| || |||||||| |||||||||| ||||| ||||||||
Sbjct: 201 tgccttcttgtatctctcaatggttgccttgacgctgttgttggagtactcatagaggcg 142
Query: 949 accacggctagagaagacgatgagggccacctcagcgtcgcagaggacggagagctcgta 1008
|| ||||| || ||||||| ||| || ||||||||||||||||| || |||||||||||
Sbjct: 141 cccgcggctggaaaagacgacgagcgcgacctcagcgtcgcagagcaccgagagctcgta 82
Query: 1009 cgccttcttgaggagcccattgcggcgcttgcagaaggtgacctgccggctcgtgttgtt 1068
||||||||| ||||| || |||||||||||||||||||||||||||||| |||| ||||
Sbjct: 81 cgccttcttcaggagtccgttgcggcgcttgcagaaggtgacctgccggttcgtcgtgtt 22
Query: 1069 ctcgat 1074
||||||
Sbjct: 21 ctcgat 16
>gb|AF486648.1| Hordeum vulgare subsp. vulgare AGAMOUS-like protein 1 HvAG1 (AG1)
mRNA, complete cds
Length = 1163
Score = 186 bits (94), Expect = 1e-045
Identities = 175/202 (86%)
Strand = Plus / Minus
Query: 890 gccttcttgtacctctcaacagtagccttgacactgttgttggcatactcgtagaggcga 949
||||| ||||||||||||| || || || ||||||||||| | || |||||||||||
Sbjct: 353 gcctttttgtacctctcaatggtggctttcacactgttgtttgagtattcgtagaggcgc 294
Query: 950 ccacggctagagaagacgatgagggccacctcagcgtcgcagaggacggagagctcgtac 1009
|| ||||| |||||||||| |||||| ||||| ||||| ||||| || ||||||||||||
Sbjct: 293 ccgcggctggagaagacgacgagggcgacctcggcgtcacagagcaccgagagctcgtac 234
Query: 1010 gccttcttgaggagcccattgcggcgcttgcagaaggtgacctgccggctcgtgttgttc 1069
|||||||||||||| || |||||||||||||||||||||||||||||| | ||| |||||
Sbjct: 233 gccttcttgaggaggccgttgcggcgcttgcagaaggtgacctgccggttggtggtgttc 174
Query: 1070 tcgatcctcttgatctcaatcc 1091
||||| | ||||||||| ||||
Sbjct: 173 tcgatgcgcttgatctcgatcc 152
>gb|BM097203.2|BM097203 EBpi07_SQ002_L16_R pistil, 12 DPA, no treatment, cv Optic, EBpi07
Hordeum vulgare subsp. vulgare cDNA clone
EBpi07_SQ002_L16 5', mRNA sequence
Length = 524
Score = 184 bits (93), Expect = 5e-045
Identities = 165/189 (87%)
Strand = Plus / Minus
Query: 916 cttgacactgttgttggcatactcgtagaggcgaccacggctagagaagacgatgagggc 975
|||||| |||||||||| ||||| |||||||| || ||||| || ||||||| ||| ||
Sbjct: 524 cttgacgctgttgttggagtactcatagaggcgcccgcggctggaaaagacgacgagcgc 465
Query: 976 cacctcagcgtcgcagaggacggagagctcgtacgccttcttgaggagcccattgcggcg 1035
||||||||||||||||| || |||||||||||||||||||| ||||| || ||||||||
Sbjct: 464 gacctcagcgtcgcagagcaccgagagctcgtacgccttcttcaggagtccgttgcggcg 405
Query: 1036 cttgcagaaggtgacctgccggctcgtgttgttctcgatcctcttgatctcaatccttcc 1095
|||||||||||||||||||||| |||| |||||||||| | ||||||||| ||||| ||
Sbjct: 404 cttgcagaaggtgacctgccggttcgtcgtgttctcgatgcgcttgatctcgatcctccc 345
Query: 1096 tctacccat 1104
||| |||||
Sbjct: 344 tctccccat 336
>gb|BI948755.1|BI948755 HVSMEl0010L12f Hordeum vulgare spike EST library HVcDNA0012 (Fusarium
infected) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEl0010L12f, mRNA sequence
Length = 854
Score = 180 bits (91), Expect = 7e-044
Identities = 160/183 (87%)
Strand = Plus / Minus
Query: 889 tgccttcttgtacctctcaacagtagccttgacactgttgttggcatactcgtagaggcg 948
|||||||||||| ||||||| || |||||||| |||||||||| ||||| ||||||||
Sbjct: 353 tgccttcttgtatctctcaatggttgccttgacgctgttgttggagtactcatagaggcg 294
Query: 949 accacggctagagaagacgatgagggccacctcagcgtcgcagaggacggagagctcgta 1008
|| ||||| || ||||||| ||| || ||||||||||||||||| || |||||||||||
Sbjct: 293 cccgcggctggaaaagacgacgagcgcgacctcagcgtcgcagagcaccgagagctcgta 234
Query: 1009 cgccttcttgaggagcccattgcggcgcttgcagaaggtgacctgccggctcgtgttgtt 1068
||||||||| ||||| || |||||||||||||||||||||||||||||| |||| ||||
Sbjct: 233 cgccttcttcaggagtccgttgcggcgcttgcagaaggtgacctgccggttcgtcgtgtt 174
Query: 1069 ctc 1071
|||
Sbjct: 173 ctc 171
>gb|CA026169.1|CA026169 HZ55C06r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ55C06
5-PRIME, mRNA sequence
Length = 505
Score = 176 bits (89), Expect = 1e-042
Identities = 149/169 (88%)
Strand = Plus / Minus
Query: 889 tgccttcttgtacctctcaacagtagccttgacactgttgttggcatactcgtagaggcg 948
|||||||||||| ||||||| || |||||||| |||||||||| ||||| ||||||||
Sbjct: 183 tgccttcttgtatctctcaatggttgccttgacgctgttgttggagtactcatagaggcg 124
Query: 949 accacggctagagaagacgatgagggccacctcagcgtcgcagaggacggagagctcgta 1008
|| ||||| || ||||||| ||| || ||||||||||||||||| || |||||||||||
Sbjct: 123 cccgcggctggaaaagacgacgagcgcgacctcagcgtcgcagagcaccgagagctcgta 64
Query: 1009 cgccttcttgaggagcccattgcggcgcttgcagaaggtgacctgccgg 1057
||||||||| ||||| || ||||||||||||||||||||||||||||||
Sbjct: 63 cgccttcttcaggagtccgttgcggcgcttgcagaaggtgacctgccgg 15
>gb|BG417142.1|BG417142 HVSMEk0016H10f Hordeum vulgare testa/pericarp EST library HVcDNA0013
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEk0016H10f, mRNA sequence
Length = 471
Score = 170 bits (86), Expect = 7e-041
Identities = 158/182 (86%)
Strand = Plus / Minus
Query: 923 ctgttgttggcatactcgtagaggcgaccacggctagagaagacgatgagggccacctca 982
|||||||||| ||||| |||||||| || ||||| || ||||||| ||| || ||||||
Sbjct: 248 ctgttgttggagtactcatagaggcgcccgcggctggaaaagacgacgagcgcgacctca 189
Query: 983 gcgtcgcagaggacggagagctcgtacgccttcttgaggagcccattgcggcgcttgcag 1042
||||||||||| || |||||||||||||||||||| ||||| || |||||||||||||||
Sbjct: 188 gcgtcgcagagcaccgagagctcgtacgccttcttcaggagtccgttgcggcgcttgcag 129
Query: 1043 aaggtgacctgccggctcgtgttgttctcgatcctcttgatctcaatccttcctctaccc 1102
||||||||||||||| |||| |||||||||| | |||||| || ||||| ||||| |||
Sbjct: 128 aaggtgacctgccggttcgtcgtgttctcgatgcgcttgatatcgatcctccctctcccc 69
Query: 1103 at 1104
||
Sbjct: 68 at 67
>gb|BI948062.1|BI948062 HVSMEl0008A23f Hordeum vulgare spike EST library HVcDNA0012 (Fusarium
infected) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEl0008A23f, mRNA sequence
Length = 825
Score = 168 bits (85), Expect = 3e-040
Identities = 148/169 (87%)
Strand = Plus / Minus
Query: 889 tgccttcttgtacctctcaacagtagccttgacactgttgttggcatactcgtagaggcg 948
|||||||||||| ||||||| || |||||||| |||||||||| ||||| ||||||||
Sbjct: 328 tgccttcttgtatctctcaatggttgccttgacgctgttgttggagtactcatagaggcg 269
Query: 949 accacggctagagaagacgatgagggccacctcagcgtcgcagaggacggagagctcgta 1008
|| ||||| || ||||||| ||| || ||||||||||||||||| || |||||||||||
Sbjct: 268 cccgcggctggaaaagacgacgagcgcgacctcagcgtcgcagagcaccgagagctcgta 209
Query: 1009 cgccttcttgaggagcccattgcggcgcttgcagaaggtgacctgccgg 1057
||||||||| ||||| || |||||||||| |||||||||||||||||||
Sbjct: 208 cgccttcttcaggagtccgttgcggcgctcgcagaaggtgacctgccgg 160
>gb|CA021814.1|CA021814 HZ41D07r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ41D07
5-PRIME, mRNA sequence
Length = 381
Score = 157 bits (79), Expect = 1e-036
Identities = 127/143 (88%)
Strand = Plus / Minus
Query: 962 aagacgatgagggccacctcagcgtcgcagaggacggagagctcgtacgccttcttgagg 1021
||||||||||| |||||||| |||||||| ||||||||||||||||| |||||||| | |
Sbjct: 380 aagacgatgagcgccacctcggcgtcgcacaggacggagagctcgtaggccttcttcaag 321
Query: 1022 agcccattgcggcgcttgcagaaggtgacctgccggctcgtgttgttctcgatcctcttg 1081
||||| || ||||||||||||||||| ||||| ||||| ||| | ||||| |||||||||
Sbjct: 320 agcccgttccggcgcttgcagaaggtcacctggcggctagtggtattctcaatcctcttg 261
Query: 1082 atctcaatccttcctctacccat 1104
|||||||||||||| || |||||
Sbjct: 260 atctcaatccttcccctccccat 238
>gb|BE195464.3|BE195464 HVSMEh0089L24f Hordeum vulgare 5-45 DAP spike EST library HVcDNA0009
(5 to 45 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEh0089L24f, mRNA sequence
Length = 786
Score = 147 bits (74), Expect = 1e-033
Identities = 149/174 (85%)
Strand = Plus / Minus
Query: 932 gcatactcgtagaggcgaccacggctagagaagacgatgagggccacctcagcgtcgcag 991
||||||||||||||||| || ||| ||||||||||| | ||| | ||| || ||||||
Sbjct: 276 gcatactcgtagaggcggccgcgggcggagaagacgatcaaggcgatctccgcttcgcag 217
Query: 992 aggacggagagctcgtacgccttcttgaggagcccattgcggcgcttgcagaaggtgacc 1051
||||||||||||||||| ||||||||||| ||||| || | ||||||||||||||| ||
Sbjct: 216 aggacggagagctcgtaggccttcttgagcagcccgttcctgcgcttgcagaaggtcact 157
Query: 1052 tgccggctcgtgttgttctcgatcctcttgatctcaatccttcctctacccatg 1105
|| |||||||| |||||||||||||||||||||| ||||| || || ||||||
Sbjct: 156 tggcggctcgtcgtgttctcgatcctcttgatctcgatcctccccctccccatg 103
>gb|BG415259.2|BG415259 HVSMEk0005M04f Hordeum vulgare testa/pericarp EST library HVcDNA0013
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEk0005M04f, mRNA sequence
Length = 892
Score = 147 bits (74), Expect = 1e-033
Identities = 149/174 (85%)
Strand = Plus / Minus
Query: 932 gcatactcgtagaggcgaccacggctagagaagacgatgagggccacctcagcgtcgcag 991
||||||||||||||||| || ||| ||||||||||| | ||| | ||| || ||||||
Sbjct: 276 gcatactcgtagaggcggccgcgggcggagaagacgatcaaggcgatctccgcttcgcag 217
Query: 992 aggacggagagctcgtacgccttcttgaggagcccattgcggcgcttgcagaaggtgacc 1051
||||||||||||||||| ||||||||||| ||||| || | ||||||||||||||| ||
Sbjct: 216 aggacggagagctcgtaggccttcttgagcagcccgttcctgcgcttgcagaaggtcact 157
Query: 1052 tgccggctcgtgttgttctcgatcctcttgatctcaatccttcctctacccatg 1105
|| |||||||| |||||||||||||||||||||| ||||| || || ||||||
Sbjct: 156 tggcggctcgtcgtgttctcgatcctcttgatctcgatcctccccctccccatg 103
>gb|BU982429.1|BU982429 HA26I11r HA Hordeum vulgare subsp. vulgare cDNA clone HA26I11
5-PRIME, mRNA sequence
Length = 584
Score = 147 bits (74), Expect = 1e-033
Identities = 149/174 (85%)
Strand = Plus / Minus
Query: 932 gcatactcgtagaggcgaccacggctagagaagacgatgagggccacctcagcgtcgcag 991
||||||||||||||||| || ||| ||||||||||| | ||| | ||| || ||||||
Sbjct: 275 gcatactcgtagaggcggccgcgggcggagaagacgatcaaggcgatctcggcttcgcag 216
Query: 992 aggacggagagctcgtacgccttcttgaggagcccattgcggcgcttgcagaaggtgacc 1051
||||||||||||||||| ||||||||||| ||||| || | ||||||||||||||| ||
Sbjct: 215 aggacggagagctcgtaggccttcttgagcagcccgttcctgcgcttgcagaaggtcact 156
Query: 1052 tgccggctcgtgttgttctcgatcctcttgatctcaatccttcctctacccatg 1105
|| |||||||| |||||||||||||||||||||| ||||| || || ||||||
Sbjct: 155 tggcggctcgtcgtgttctcgatcctcttgatctcgatcctccccctccccatg 102
>gb|BU984647.1|BU984647 HF04I23r HF Hordeum vulgare subsp. vulgare cDNA clone HF04I23
5-PRIME, mRNA sequence
Length = 649
Score = 139 bits (70), Expect = 2e-031
Identities = 109/122 (89%)
Strand = Plus / Minus
Query: 953 cggctagagaagacgatgagggccacctcagcgtcgcagaggacggagagctcgtacgcc 1012
||||| ||||||| |||||| |||||||| ||||||||||| |||||||||||||| |||
Sbjct: 135 cggctggagaagatgatgagcgccacctcggcgtcgcagagcacggagagctcgtaggcc 76
Query: 1013 ttcttgaggagcccattgcggcgcttgcagaaggtgacctgccggctcgtgttgttctcg 1072
||||||||||| || |||||||||||| ||||||||||||||||| | | |||||||||
Sbjct: 75 ttcttgaggaggccgttgcggcgcttggagaaggtgacctgccggttgatcttgttctcg 16
Query: 1073 at 1074
||
Sbjct: 15 at 14
>gb|CK124663.1|CK124663 BES1824109o14 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010O149 5-PRIME, mRNA sequence
Length = 778
Score = 139 bits (70), Expect = 2e-031
Identities = 109/122 (89%)
Strand = Plus / Minus
Query: 953 cggctagagaagacgatgagggccacctcagcgtcgcagaggacggagagctcgtacgcc 1012
||||| ||||||| |||||| |||||||| ||||||||||| |||||||||||||| |||
Sbjct: 141 cggctggagaagatgatgagcgccacctcggcgtcgcagagcacggagagctcgtaggcc 82
Query: 1013 ttcttgaggagcccattgcggcgcttgcagaaggtgacctgccggctcgtgttgttctcg 1072
||||||||||| || |||||||||||| ||||||||||||||||| | | |||||||||
Sbjct: 81 ttcttgaggaggccgttgcggcgcttggagaaggtgacctgccggttgatcttgttctcg 22
Query: 1073 at 1074
||
Sbjct: 21 at 20
>gb|AY541067.1| Hordeum vulgare subsp. vulgare AGAMOUS LIKE6-like protein mRNA,
complete cds
Length = 1464
Score = 139 bits (70), Expect = 2e-031
Identities = 109/122 (89%)
Strand = Plus / Minus
Query: 953 cggctagagaagacgatgagggccacctcagcgtcgcagaggacggagagctcgtacgcc 1012
||||| ||||||| |||||| |||||||| ||||||||||| |||||||||||||| |||
Sbjct: 538 cggctggagaagatgatgagcgccacctcggcgtcgcagagcacggagagctcgtaggcc 479
Query: 1013 ttcttgaggagcccattgcggcgcttgcagaaggtgacctgccggctcgtgttgttctcg 1072
||||||||||| || |||||||||||| ||||||||||||||||| | | |||||||||
Sbjct: 478 ttcttgaggaggccgttgcggcgcttggagaaggtgacctgccggttgatcttgttctcg 419
Query: 1073 at 1074
||
Sbjct: 418 at 417
>gb|BM373901.1|BM373901 EBma03_SQ003_B04_R maternal, 8 DPA, no treatment, cv Optic, EBma03
Hordeum vulgare subsp. vulgare cDNA clone
EBma03_SQ003_B04 5', mRNA sequence
Length = 255
Score = 133 bits (67), Expect = 2e-029
Identities = 127/147 (86%)
Strand = Plus / Minus
Query: 959 gagaagacgatgagggccacctcagcgtcgcagaggacggagagctcgtacgccttcttg 1018
||||||||||| | ||| | ||| || ||||||||||||||||||||||| |||||||||
Sbjct: 250 gagaagacgatcaaggcgatctcggcttcgcagaggacggagagctcgtaggccttcttg 191
Query: 1019 aggagcccattgcggcgcttgcagaaggtgacctgccggctcgtgttgttctcgatcctc 1078
|| ||||| || | ||||||||||||||| || || |||||||| ||||||||||||||
Sbjct: 190 agcagcccgttcctgcgcttgcagaaggtcacttggcggctcgtcgtgttctcgatcctc 131
Query: 1079 ttgatctcaatccttcctctacccatg 1105
|||||||| ||||| || || ||||||
Sbjct: 130 ttgatctcgatcctccccctccccatg 104
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 171,355
Number of Sequences: 312970
Number of extensions: 171355
Number of successful extensions: 53473
Number of sequences better than 0.5: 220
Number of HSP's better than 0.5 without gapping: 218
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 53040
Number of HSP's gapped (non-prelim): 421
length of query: 1221
length of database: 175,134,539
effective HSP length: 19
effective length of query: 1202
effective length of database: 169,188,109
effective search space: 203364107018
effective search space used: 203364107018
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)