BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= C4H2
(1794 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BE558391.1|BE558391 HV_CEb0017H19f Hordeum vulgare seedl... 982 0.0
gb|CA025894.1|CA025894 HZ53H05r HZ Hordeum vulgare subsp. v... 784 0.0
gb|BQ758724.1|BQ758724 EBma07_SQ002_J15_R maternal, 21 DPA,... 587 e-166
gb|CA026572.1|CA026572 HZ56E18r HZ Hordeum vulgare subsp. v... 550 e-155
gb|BI955765.1|BI955765 HVSMEm0024G17f Hordeum vulgare green... 524 e-147
gb|BF253423.2|BF253423 HVSMEf0001G03f Hordeum vulgare seedl... 494 e-138
gb|CA026832.1|CA026832 HZ57B14r HZ Hordeum vulgare subsp. v... 486 e-135
gb|BG300103.1|BG300103 HVSMEb0011H20f Hordeum vulgare seedl... 472 e-131
gb|CA023650.1|CA023650 HZ46P09r HZ Hordeum vulgare subsp. v... 470 e-131
gb|BE215541.1|BE215541 HV_CEb0008B12f Hordeum vulgare seedl... 466 e-129
gb|BQ471910.1|BQ471910 HV03N12r HV Hordeum vulgare subsp. v... 415 e-114
gb|CA025677.1|CA025677 HZ52M20r HZ Hordeum vulgare subsp. v... 413 e-113
gb|AV921527.1|AV921527 AV921527 K. Sato unpublished cDNA li... 387 e-106
gb|AV922603.1|AV922603 AV922603 K. Sato unpublished cDNA li... 387 e-106
gb|AJ436646.1|AJ436646 AJ436646 S00002 Hordeum vulgare subs... 375 e-102
gb|BJ467535.1|BJ467535 BJ467535 K. Sato unpublished cDNA li... 373 e-101
gb|BJ465891.1|BJ465891 BJ465891 K. Sato unpublished cDNA li... 371 e-101
gb|BI777730.2|BI777730 EBro08_SQ001_K12_R root, 3 week, dro... 369 e-100
gb|AJ435273.1|AJ435273 AJ435273 S00002 Hordeum vulgare subs... 349 2e-094
gb|BE216787.2|BE216787 HV_CEb0011J09f Hordeum vulgare seedl... 331 4e-089
gb|BQ665478.1|BQ665478 HX03M12u HX Hordeum vulgare subsp. v... 309 1e-082
gb|AU252323.1|AU252323 AU252323 salt-stressed barley root c... 306 2e-081
gb|BF618363.2|BF618363 HVSMEc0005H12f Hordeum vulgare seedl... 280 1e-073
gb|BQ767241.1|BQ767241 EBro08_SQ008_I11_R root, 3 week, dro... 264 8e-069
gb|BG345061.2|BG345061 HVSMEg0018H23f Hordeum vulgare pre-a... 254 8e-066
gb|BE519761.3|BE519761 HV_CEb0021C04f Hordeum vulgare seedl... 250 1e-064
gb|BU973663.1|BU973663 HB25J24r BC Hordeum vulgare subsp. v... 250 1e-064
gb|AL502425.1|AL502425 AL502425 Hordeum vulgare Barke roots... 248 5e-064
gb|AJ433404.1|AJ433404 AJ433404 S00002 Hordeum vulgare subs... 240 1e-061
gb|AL504109.1|AL504109 AL504109 Hordeum vulgare Barke roots... 234 7e-060
gb|AL505149.1|AL505149 AL505149 Hordeum vulgare Barke roots... 234 7e-060
gb|BF620285.2|BF620285 HVSMEc0019F06f Hordeum vulgare seedl... 234 7e-060
gb|BE216506.2|BE216506 HV_CEb0010K21f Hordeum vulgare seedl... 234 7e-060
gb|BI960006.1|BI960006 HVSMEn0022N09f Hordeum vulgare rachi... 234 7e-060
gb|BQ471406.1|BQ471406 HV02F12r HV Hordeum vulgare subsp. v... 234 7e-060
gb|BI778834.2|BI778834 EBro01_SQ001_L02_R root, 3 week, hyd... 234 7e-060
gb|AJ463481.1|AJ463481 AJ463481 S00002 Hordeum vulgare subs... 232 3e-059
gb|BJ465823.1|BJ465823 BJ465823 K. Sato unpublished cDNA li... 232 3e-059
gb|BM817083.1|BM817083 HC01F04_T3.ab1 HC Hordeum vulgare su... 226 2e-057
gb|AL501446.1|AL501446 AL501446 Hordeum vulgare Barke roots... 202 3e-050
gb|BG308974.1|BG308974 HVSMEc0001C17f Hordeum vulgare seedl... 194 6e-048
gb|BQ762245.1|BQ762245 EBro01_SQ005_B10_R root, 3 week, hyd... 190 1e-046
gb|BQ767330.1|BQ767330 EBro08_SQ008_H18_R root, 3 week, dro... 181 1e-043
gb|BF257476.2|BF257476 HVSMEf0013A08f Hordeum vulgare seedl... 173 2e-041
gb|BF257700.2|BF257700 HVSMEf0013K04f Hordeum vulgare seedl... 173 2e-041
gb|BG367496.1|BG367496 HVSMEi0012H14f Hordeum vulgare 20 DA... 173 2e-041
gb|AV917422.1|AV917422 AV917422 K. Sato unpublished cDNA li... 173 2e-041
gb|BF261377.2|BF261377 HV_CEa0001C01f Hordeum vulgare seedl... 171 9e-041
gb|AL504527.1|AL504527 AL504527 Hordeum vulgare Barke roots... 167 1e-039
gb|BI959752.1|BI959752 HVSMEn0021E03f Hordeum vulgare rachi... 167 1e-039
gb|BQ664209.1|BQ664209 HV02F12u HV Hordeum vulgare subsp. v... 167 1e-039
gb|AL504406.1|AL504406 AL504406 Hordeum vulgare Barke roots... 165 6e-039
gb|BF258169.3|BF258169 HVSMEf0014P23f Hordeum vulgare seedl... 165 6e-039
gb|BF260290.3|BF260290 HVSMEf0021J18f Hordeum vulgare seedl... 165 6e-039
gb|AV913914.1|AV913914 AV913914 K. Sato unpublished cDNA li... 165 6e-039
gb|BJ463086.1|BJ463086 BJ463086 K. Sato unpublished cDNA li... 165 6e-039
gb|BQ470705.1|BQ470705 HX03M12r HX Hordeum vulgare subsp. v... 165 6e-039
gb|BF253649.2|BF253649 HVSMEf0001L18f Hordeum vulgare seedl... 163 2e-038
gb|BF261518.2|BF261518 HV_CEa0001H23f Hordeum vulgare seedl... 163 2e-038
emb|AJ234782.1|HVU234782 Hordeum vulgare genomic DNA fragme... 161 9e-038
gb|AL501837.1|AL501837 AL501837 Hordeum vulgare Barke roots... 137 1e-030
gb|BF256412.2|BF256412 HVSMEf0009I22f Hordeum vulgare seedl... 133 2e-029
gb|BQ764131.1|BQ764131 EBro03_SQ006_I11_R root, 3 week, wat... 131 8e-029
gb|AL503971.1|AL503971 AL503971 Hordeum vulgare Barke roots... 119 3e-025
gb|BQ767980.1|BQ767980 EBro08_SQ010_I12_R root, 3 week, dro... 119 3e-025
emb|AJ234781.1|HVU234781 Hordeum vulgare genomic DNA fragme... 113 2e-023
gb|BI779253.2|BI779253 EBro01_SQ003_H11_R root, 3 week, hyd... 111 8e-023
gb|BM370693.2|BM370693 EBro04_SQ001_N15_R root, 3 week, sal... 105 5e-021
gb|BE420941.1|BE420941 HWM004.B06 ITEC HWM Barley Leaf Libr... 98 1e-018
gb|BI959145.1|BI959145 HVSMEn0018G02f Hordeum vulgare rachi... 98 1e-018
gb|BM370681.2|BM370681 EBro04_SQ001_M14_R root, 3 week, sal... 94 2e-017
gb|BQ458589.1|BQ458589 HA04M20r HA Hordeum vulgare subsp. v... 62 7e-008
gb|BQ656344.1|BQ656344 HA04M20u HA Hordeum vulgare subsp. v... 62 7e-008
gb|BF621128.2|BF621128 HVSMEa0004D22f Hordeum vulgare seedl... 46 0.004
gb|AL508615.1|AL508615 AL508615 Hordeum vulgare Barke devel... 44 0.016
gb|BQ460875.1|BQ460875 HA05K02r HA Hordeum vulgare subsp. v... 44 0.016
gb|BM098719.2|BM098719 EBem08_SQ003_O03_R embryo, 40 DPA, n... 44 0.016
gb|BI779473.2|BI779473 EBro01_SQ004_C10_R root, 3 week, hyd... 44 0.016
gb|BI777331.2|BI777331 EBro03_SQ002_O16_R root, 3 week, wat... 44 0.016
gb|BU995653.1|BU995653 HM10O21r HM Hordeum vulgare subsp. v... 44 0.016
gb|BU996849.1|BU996849 HM14P16r HM Hordeum vulgare subsp. v... 44 0.016
gb|CA002964.1|CA002964 HS09A09r HS Hordeum vulgare subsp. v... 44 0.016
gb|CB883323.1|CB883323 HQ01O03w HQ Hordeum vulgare subsp. v... 44 0.016
gb|CV058158.1|CV058158 BNEL35a1 Barley EST endosperm librar... 44 0.016
gb|CV059651.1|CV059651 BNEL4E1 Barley EST endosperm library... 44 0.016
gb|BQ763612.1|BQ763612 EBro02_SQ008_N21_R root, 3 week, hyd... 42 0.061
gb|BG300197.1|BG300197 HVSMEb0010N13f Hordeum vulgare seedl... 40 0.24
gb|BG301080.1|BG301080 HVSMEb0019H18f Hordeum vulgare seedl... 40 0.24
gb|BE602604.2|BE602604 HVSMEh0100G11f Hordeum vulgare 5-45 ... 40 0.24
gb|BI954884.1|BI954884 HVSMEm0020D23f Hordeum vulgare green... 40 0.24
gb|BI955713.1|BI955713 HVSMEm0024C20f Hordeum vulgare green... 40 0.24
gb|BI956938.1|BI956938 HVSMEn0006D16f Hordeum vulgare rachi... 40 0.24
gb|CA009008.1|CA009008 HU12O03r HU Hordeum vulgare subsp. v... 40 0.24
gb|CA011333.1|CA011333 HT06E05u HT Hordeum vulgare subsp. v... 40 0.24
gb|CA012057.1|CA012057 HT04F04r HT Hordeum vulgare subsp. v... 40 0.24
gb|CA012725.1|CA012725 HT06E05r HT Hordeum vulgare subsp. v... 40 0.24
gb|CA018435.1|CA018435 HV08J21r HV Hordeum vulgare subsp. v... 40 0.24
gb|CA030582.1|CA030582 HX07H18r HX Hordeum vulgare subsp. v... 40 0.24
gb|CV054678.1|CV054678 BNEL112b11 Barley EST endosperm libr... 40 0.24
gb|CV057232.1|CV057232 BNEL25e10 Barley EST endosperm libra... 40 0.24
gb|CV057847.1|CV057847 BNEL31e12 Barley EST endosperm libra... 40 0.24
gb|AY641412.1| Hordeum vulgare subsp. vulgare retrotranspos... 40 0.24
gb|AL508836.1|AL508836 AL508836 Hordeum vulgare Barke devel... 38 0.96
gb|BI777219.1|BI777219 EBro03_SQ002_H14_R root, 3 week, wat... 38 0.96
gb|BF624189.2|BF624189 HVSMEa0012H20f Hordeum vulgare seedl... 38 0.96
gb|BF624448.2|BF624448 HVSMEa0016F02f Hordeum vulgare seedl... 38 0.96
gb|BI950331.1|BI950331 HVSMEl0020E12f Hordeum vulgare spike... 38 0.96
gb|BI958886.1|BI958886 HVSMEn0017A15f Hordeum vulgare rachi... 38 0.96
gb|BQ466722.1|BQ466722 HS01G02T HS Hordeum vulgare subsp. v... 38 0.96
gb|BQ467038.1|BQ467038 HS02G02r HS Hordeum vulgare subsp. v... 38 0.96
gb|BQ469122.1|BQ469122 HM03H10r HM Hordeum vulgare subsp. v... 38 0.96
gb|BM372507.2|BM372507 EBpi05_SQ003_C15_R pistil, 8 DPA, no... 38 0.96
gb|BQ757875.1|BQ757875 EBem10_SQ005_I01_R embryo, 2 Day ger... 38 0.96
gb|BQ766181.1|BQ766181 EBro08_SQ005_C10_R root, 3 week, dro... 38 0.96
gb|BU995376.1|BU995376 HM10B01r HM Hordeum vulgare subsp. v... 38 0.96
gb|BU999284.1|BU999284 HI14A18r HI Hordeum vulgare subsp. v... 38 0.96
gb|CA013705.1|CA013705 HT09E03r HT Hordeum vulgare subsp. v... 38 0.96
gb|CA024561.1|CA024561 HZ49K12r HZ Hordeum vulgare subsp. v... 38 0.96
gb|CB881502.1|CB881502 HM10A02w HM Hordeum vulgare subsp. v... 38 0.96
gb|CV056550.1|CV056550 BNEL19A6 Barley EST endosperm librar... 38 0.96
gb|CV057739.1|CV057739 BNEL30c4 Barley EST endosperm librar... 38 0.96
gb|CV058816.1|CV058816 BNEL41c3 Barley EST endosperm librar... 38 0.96
gb|CV060011.1|CV060011 BNEL53d6 Barley EST endosperm librar... 38 0.96
gb|CV061136.1|CV061136 BNEL65d1 Barley EST endosperm librar... 38 0.96
gb|CV062631.1|CV062631 BNEL81b6 Barley EST endosperm librar... 38 0.96
gb|CV062934.1|CV062934 BNEL84g2 Barley EST endosperm librar... 38 0.96
gb|CV063668.1|CV063668 BNEL91h2 Barley EST endosperm librar... 38 0.96
gb|CV063771.1|CV063771 BNEL93a12 Barley EST endosperm libra... 38 0.96
gb|CX662506.1|CX662506 EST 322 Expressed sequences from Bar... 38 0.96
gb|CX662646.1|CX662646 EST 477 Expressed sequences from Bar... 38 0.96
gb|BE420881.1|BE420881 HWM003.E06 ITEC HWM Barley Leaf Libr... 36 3.8
gb|AL503840.1|AL503840 AL503840 Hordeum vulgare Barke roots... 36 3.8
gb|AL505436.1|AL505436 AL505436 Hordeum vulgare Barke roots... 36 3.8
gb|AL506253.1|AL506253 AL506253 Hordeum vulgare Barke devel... 36 3.8
gb|AL507734.1|AL507734 AL507734 Hordeum vulgare Barke devel... 36 3.8
gb|AL508202.1|AL508202 AL508202 Hordeum vulgare Barke devel... 36 3.8
gb|AL508453.1|AL508453 AL508453 Hordeum vulgare Barke devel... 36 3.8
gb|AL508633.1|AL508633 AL508633 Hordeum vulgare Barke devel... 36 3.8
gb|AL509055.1|AL509055 AL509055 Hordeum vulgare Barke devel... 36 3.8
gb|AV836496.1|AV836496 AV836496 K. Sato unpublished cDNA li... 36 3.8
gb|BF626485.1|BF626485 HVSMEa0018I13f Hordeum vulgare seedl... 36 3.8
gb|BF621409.2|BF621409 HVSMEa0006N07f Hordeum vulgare seedl... 36 3.8
gb|BF628457.2|BF628457 HVSMEb0006C02f Hordeum vulgare seedl... 36 3.8
gb|BF628613.2|BF628613 HVSMEb0006L24f Hordeum vulgare seedl... 36 3.8
gb|BF630524.2|BF630524 HVSMEb0011C23f Hordeum vulgare seedl... 36 3.8
gb|BG300444.1|BG300444 HVSMEb0017B10f Hordeum vulgare seedl... 36 3.8
gb|BG301294.1|BG301294 HVSMEb0020I14f Hordeum vulgare seedl... 36 3.8
gb|BF619362.2|BF619362 HVSMEc0016M03f Hordeum vulgare seedl... 36 3.8
gb|BF257111.2|BF257111 HVSMEf0011O06f Hordeum vulgare seedl... 36 3.8
gb|BF259886.2|BF259886 HVSMEf0020I13f Hordeum vulgare seedl... 36 3.8
gb|BF260474.2|BF260474 HVSMEf0022B13f Hordeum vulgare seedl... 36 3.8
gb|BF260932.2|BF260932 HVSMEf0023F04f Hordeum vulgare seedl... 36 3.8
gb|BG365474.1|BG365474 HVSMEi0002N11f Hordeum vulgare 20 DA... 36 3.8
gb|BG367699.1|BG367699 HVSMEi0013F02f Hordeum vulgare 20 DA... 36 3.8
gb|BI947428.1|BI947428 HVSMEl0005H09f Hordeum vulgare spike... 36 3.8
gb|BI952340.1|BI952340 HVSMEm0006A01f Hordeum vulgare green... 36 3.8
gb|BI952693.1|BI952693 HVSMEm0007G18f Hordeum vulgare green... 36 3.8
gb|BI956465.1|BI956465 HVSMEn0003I13f Hordeum vulgare rachi... 36 3.8
gb|BI956467.1|BI956467 HVSMEn0003I17f Hordeum vulgare rachi... 36 3.8
gb|BI956830.1|BI956830 HVSMEn0005I22f Hordeum vulgare rachi... 36 3.8
gb|BI957225.1|BI957225 HVSMEn0008D16f Hordeum vulgare rachi... 36 3.8
gb|BI957719.1|BI957719 HVSMEn0010N19f Hordeum vulgare rachi... 36 3.8
gb|BE215637.1|BE215637 HV_CEb0007H18f Hordeum vulgare seedl... 36 3.8
gb|BF263626.2|BF263626 HV_CEa0007D21f Hordeum vulgare seedl... 36 3.8
gb|BF266096.2|BF266096 HV_CEa0014C18f Hordeum vulgare seedl... 36 3.8
gb|BE214196.2|BE214196 HV_CEb0002J22f Hordeum vulgare seedl... 36 3.8
gb|BE214494.2|BE214494 HV_CEb0003J23f Hordeum vulgare seedl... 36 3.8
gb|BF065493.2|BF065493 HV_CEb0012J10f Hordeum vulgare seedl... 36 3.8
gb|BF064659.2|BF064659 HV_CEb0016M09f Hordeum vulgare seedl... 36 3.8
gb|BF064992.2|BF064992 HV_CEb0022F17f Hordeum vulgare seedl... 36 3.8
gb|BG415278.1|BG415278 HVSMEk0005N09f Hordeum vulgare testa... 36 3.8
gb|BI958548.1|BI958548 HVSMEn0015I15f Hordeum vulgare rachi... 36 3.8
gb|BI958586.1|BI958586 HVSMEn0015M05f Hordeum vulgare rachi... 36 3.8
gb|BI958616.1|BI958616 HVSMEn0015O17f Hordeum vulgare rachi... 36 3.8
gb|BI959036.1|BI959036 HVSMEn0017N09f Hordeum vulgare rachi... 36 3.8
gb|BI959573.1|BI959573 HVSMEn0020E05f Hordeum vulgare rachi... 36 3.8
gb|BI960275.1|BI960275 HVSMEn0024B01f Hordeum vulgare rachi... 36 3.8
gb|BI960280.1|BI960280 HVSMEn0024B08f Hordeum vulgare rachi... 36 3.8
gb|BI960505.1|BI960505 HVSMEn0024N09f Hordeum vulgare rachi... 36 3.8
gb|BF628196.3|BF628196 HVSMEb0003G07f Hordeum vulgare seedl... 36 3.8
gb|BF631213.3|BF631213 HVSMEb0015E18f Hordeum vulgare seedl... 36 3.8
gb|BF253827.3|BF253827 HVSMEf0002D18f Hordeum vulgare seedl... 36 3.8
gb|AW982410.3|AW982410 HVSMEg0003D04f Hordeum vulgare pre-a... 36 3.8
gb|BG344019.2|BG344019 HVSMEg0007G14f Hordeum vulgare pre-a... 36 3.8
gb|AW983540.3|AW983540 HVSMEg0010P19f Hordeum vulgare pre-a... 36 3.8
gb|BE195199.3|BE195199 HVSMEh0088J02f Hordeum vulgare 5-45 ... 36 3.8
gb|BE195300.3|BE195300 HVSMEh0088N14f Hordeum vulgare 5-45 ... 36 3.8
gb|AV913934.1|AV913934 AV913934 K. Sato unpublished cDNA li... 36 3.8
gb|AV914567.1|AV914567 AV914567 K. Sato unpublished cDNA li... 36 3.8
gb|AV916927.1|AV916927 AV916927 K. Sato unpublished cDNA li... 36 3.8
gb|AV917238.1|AV917238 AV917238 K. Sato unpublished cDNA li... 36 3.8
gb|AV918176.1|AV918176 AV918176 K. Sato unpublished cDNA li... 36 3.8
gb|AV918301.1|AV918301 AV918301 K. Sato unpublished cDNA li... 36 3.8
gb|AV919647.1|AV919647 AV919647 K. Sato unpublished cDNA li... 36 3.8
gb|AV922405.1|AV922405 AV922405 K. Sato unpublished cDNA li... 36 3.8
gb|BM816347.1|BM816347 HC02H08_T3.ab1 HC Hordeum vulgare su... 36 3.8
gb|BJ446926.1|BJ446926 BJ446926 K. Sato unpublished cDNA li... 36 3.8
gb|BJ451497.1|BJ451497 BJ451497 K. Sato unpublished cDNA li... 36 3.8
gb|BJ452393.1|BJ452393 BJ452393 K. Sato unpublished cDNA li... 36 3.8
gb|BJ459941.1|BJ459941 BJ459941 K. Sato unpublished cDNA li... 36 3.8
gb|BJ464184.1|BJ464184 BJ464184 K. Sato unpublished cDNA li... 36 3.8
gb|BJ464493.1|BJ464493 BJ464493 K. Sato unpublished cDNA li... 36 3.8
gb|BJ466861.1|BJ466861 BJ466861 K. Sato unpublished cDNA li... 36 3.8
gb|BJ471507.1|BJ471507 BJ471507 K. Sato unpublished cDNA li... 36 3.8
gb|BQ463026.1|BQ463026 HI02M20r HI Hordeum vulgare subsp. v... 36 3.8
gb|BQ470170.1|BQ470170 HX01P18T HX Hordeum vulgare subsp. v... 36 3.8
gb|BQ470210.1|BQ470210 HX02C07r HX Hordeum vulgare subsp. v... 36 3.8
gb|BM097634.2|BM097634 EBem04_SQ002_E10_R embryo, 12 DPA, n... 36 3.8
gb|BM375802.2|BM375802 EBem06_SQ004_H08_R embryo, 21 DPA, n... 36 3.8
gb|BM376330.2|BM376330 EBma01_SQ003_D14_R maternal, 4 DPA, ... 36 3.8
gb|BI780033.2|BI780033 EBma08_SQ001_D13_R maternal, 28 DPA,... 36 3.8
gb|BQ753629.1|BQ753629 EBan01_SQ004_M19_R anther, yellow st... 36 3.8
gb|BQ758193.1|BQ758193 EBma01_SQ003_M17_R maternal, 4 DPA, ... 36 3.8
gb|BQ762997.1|BQ762997 EBro02_SQ006_G19_R root, 3 week, hyd... 36 3.8
gb|BQ763910.1|BQ763910 EBro03_SQ005_A24_R root, 3 week, wat... 36 3.8
gb|BQ763974.1|BQ763974 EBro03_SQ005_M24_R root, 3 week, wat... 36 3.8
gb|BQ764384.1|BQ764384 EBan01_SQ005_O14_R anther, yellow st... 36 3.8
gb|BQ767178.1|BQ767178 EBro08_SQ008_N04_R root, 3 week, dro... 36 3.8
gb|BQ768539.1|BQ768539 EBro08_SQ012_B01_R root, 3 week, dro... 36 3.8
gb|BQ768596.1|BQ768596 EBro08_SQ012_L01_R root, 3 week, dro... 36 3.8
gb|BU970263.1|BU970263 HB14C03r BC Hordeum vulgare subsp. v... 36 3.8
gb|BU971214.1|BU971214 HB16P06r BC Hordeum vulgare subsp. v... 36 3.8
gb|BU974832.1|BU974832 HB29E01r BC Hordeum vulgare subsp. v... 36 3.8
gb|BU995800.1|BU995800 HM11G13r HM Hordeum vulgare subsp. v... 36 3.8
gb|BU999310.1|BU999310 HI14C01r HI Hordeum vulgare subsp. v... 36 3.8
gb|BU999634.1|BU999634 HI15C19r HI Hordeum vulgare subsp. v... 36 3.8
gb|CA017643.1|CA017643 HV05M19r HV Hordeum vulgare subsp. v... 36 3.8
gb|CA018770.1|CA018770 HV09J16r HV Hordeum vulgare subsp. v... 36 3.8
gb|CA018854.1|CA018854 HV09N17r HV Hordeum vulgare subsp. v... 36 3.8
gb|CA019359.1|CA019359 HV11L22r HV Hordeum vulgare subsp. v... 36 3.8
gb|CA019622.1|CA019622 HV12J09r HV Hordeum vulgare subsp. v... 36 3.8
gb|CA020085.1|CA020085 HV14E20r HV Hordeum vulgare subsp. v... 36 3.8
gb|CA020734.1|CA020734 HZ37H02r HZ Hordeum vulgare subsp. v... 36 3.8
gb|CA023718.1|CA023718 HZ47D02r HZ Hordeum vulgare subsp. v... 36 3.8
gb|CA024279.1|CA024279 HZ48N20r HZ Hordeum vulgare subsp. v... 36 3.8
gb|CA024846.1|CA024846 HZ50H17r HZ Hordeum vulgare subsp. v... 36 3.8
gb|CA026023.1|CA026023 HZ53N22r HZ Hordeum vulgare subsp. v... 36 3.8
gb|CA026296.1|CA026296 HZ55I02r HZ Hordeum vulgare subsp. v... 36 3.8
gb|CA026355.1|CA026355 HZ55K22r HZ Hordeum vulgare subsp. v... 36 3.8
gb|CA026400.1|CA026400 HZ55M23r HZ Hordeum vulgare subsp. v... 36 3.8
gb|CA032212.1|CA032212 HX12F20r HX Hordeum vulgare subsp. v... 36 3.8
gb|CA032956.1|CA032956 HX14L04r HX Hordeum vulgare subsp. v... 36 3.8
gb|CB877535.1|CB877535 HP05E13T HP Hordeum vulgare subsp. v... 36 3.8
gb|CB882626.1|CB882626 HL02G14w HL Hordeum vulgare subsp. v... 36 3.8
gb|CB883089.1|CB883089 HQ01C17w HQ Hordeum vulgare subsp. v... 36 3.8
gb|CK122673.1|CK122673 BES1824104p19 BES1824 Hordeum vulgar... 36 3.8
gb|CK123032.1|CK123032 BES1824101m16 BES1824 Hordeum vulgar... 36 3.8
emb|AM039897.1| Hordeum vulgare mRNA for S-adenosyl-L-homoc... 36 3.8
emb|AM039898.1| Hordeum vulgare mRNA for putative S-adenosy... 36 3.8
>gb|BE558391.1|BE558391 HV_CEb0017H19f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0017H19f, mRNA sequence
Length = 813
Score = 982 bits (495), Expect = 0.0
Identities = 716/789 (90%), Gaps = 1/789 (0%)
Strand = Plus / Plus
Query: 136 cgccatcgcggtgtccaagatccgtggccgcaagctccggctgcctcccggccccgtccc 195
|||||||| ||||||||||||||| ||||||||||| ||||||| || |||||| ||||
Sbjct: 16 cgccatcgtggtgtccaagatccggggccgcaagctgaggctgccgccgggccccatccc 75
Query: 196 cgtgcccgtcttcgggaactggctgcaggtcggcgacgacctcaaccaccgcaacctcgc 255
|||||| ||||||| |||||||||||||||||||||||||| |||||||||||||| ||
Sbjct: 76 ggtgcccatcttcggtaactggctgcaggtcggcgacgacctgaaccaccgcaacctggc 135
Query: 256 cgcgctgtcccgcaagttcggcgacgtcttcctcctccggatggggcagcgcaacctggt 315
||| || |||||||||||||||| || ||||||||||| ||||| ||||||||||||||
Sbjct: 136 ggcgatggcccgcaagttcggcgaggtgttcctcctccgcatgggccagcgcaacctggt 195
Query: 316 ggtggtctcgtcgccgccgctggcgcgggaggtgctccacacgcagggcgtggagttcgg 375
|||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 196 ggtggtgtcgtccccgccgctggcgcgggaggtgctgcacacgcagggcgtggagttcgg 255
Query: 376 ctcccgcacccgcaacgtggtcttcgacatcttcacggacaaggggcaggacatggtgtt 435
|||||||||||||||||||| |||||||||||||| | | |||| ||||||||||||||
Sbjct: 256 gtcccgcacccgcaacgtggtgttcgacatcttcaccggcgagggccaggacatggtgtt 315
Query: 436 caccgtgtacggcgaccactggcgcaagatgcgccgcatcatgaccgtgcccttcttcac 495
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 316 caccgtgtacggcgaccactggcgcaagatgcggcgcatcatgaccgtgcccttcttcac 375
Query: 496 caacaaggtcgtgcagcagtaccgccacggctgggaggccgaggccgccgccgtcgtcga 555
||||||||| |||||||||||||| | ||| |||||||||||||| ||| ||| || ||
Sbjct: 376 caacaaggtggtgcagcagtaccggcccgggtgggaggccgaggcggccttcgtggtgga 435
Query: 556 cgacgtgcgcctcgaccccaaggcggccaccgacggaatcgtgctccgccgacgcctgca 615
| |||| || |||||||| ||| |||||||| || ||||||||||||| | ||||||
Sbjct: 436 caacgtccgggccgaccccagggccgccaccgagggcgtcgtgctccgccgccacctgca 495
Query: 616 gctcatgatgtacaacaacgtataccggatcatgttcgaccggcgcttcgagagcatgga 675
||||||||||||||||||| | ||||| ||||||||||||||||| ||||||||||||||
Sbjct: 496 gctcatgatgtacaacaacatgtaccgcatcatgttcgaccggcggttcgagagcatgga 555
Query: 676 cgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctcgcgcagag 735
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 556 cgacccgctcttcctccgcctccgggcgctcaacggcgagcgcagccgcctcgcgcagag 615
Query: 736 cttcgagtacaactacggcgacttcatccccatcctccgtccgttcctccgcggctacct 795
|||||||||||||||||| ||||| |||| ||||||||| || |||||||| ||||||||
Sbjct: 616 cttcgagtacaactacggggactttatccncatcctccgccccttcctccggggctacct 675
Query: 796 cagggtctgcaaggaggtcaaggagacccgcctcaagctcttcaaggatttcttcctcga 855
| || |||||||||| |||||||||||||||||||||||||||||||||| ||| || |
Sbjct: 676 ccggctctgcaagga-gtcaaggagacccgcctcaagctcttcaaggattacttnctaaa 734
Query: 856 ggagaggaagaagctggcgagcaccaaggccacggacagcaacggcctcaagtgcgccat 915
||||||||||||||||||| ||||||||||| ||||| |||||| ||||||||||||||
Sbjct: 735 cgagaggaagaagctggcgaacaccaaggccatggacaacaacggactcaagtgcgccat 794
Query: 916 tgatcacat 924
|||||||||
Sbjct: 795 tgatcacat 803
>gb|CA025894.1|CA025894 HZ53H05r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ53H05
5-PRIME, mRNA sequence
Length = 579
Score = 784 bits (395), Expect = 0.0
Identities = 531/574 (92%), Gaps = 2/574 (0%)
Strand = Plus / Plus
Query: 727 cgcgcagagcttcgagtacaactacggcgacttcatccccatcctccgtccgttcctccg 786
||||||||||||||||||||||||||| |||||||||||||||||||| || ||||||||
Sbjct: 1 cgcgcagagcttcgagtacaactacggggacttcatccccatcctccgccccttcctccg 60
Query: 787 cggctacctcagggtctgcaaggaggtcaaggagacccgcctcaagctcttcaaggattt 846
|||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cggctacctccggctctgcaaggaggtcaaggagacccgcctcaagctcttcaaggatta 120
Query: 847 cttcctcgaggagaggaagaagctggcgagcaccaaggccacggacagcaacggcctcaa 906
|||||| || ||||||||||||||||||||||||||||||| ||||| |||||| |||||
Sbjct: 121 cttcctagacgagaggaagaagctggcgagcaccaaggccatggacaacaacggactcaa 180
Query: 907 gtgcgccattgatcacatactggaggcacagcagaagggtgagatcaacgaggacaacgt 966
|||||||||||||||||| || |||||| |||||||||| ||||||||||||||||||||
Sbjct: 181 gtgcgccattgatcacatcctcgaggcagagcagaagggggagatcaacgaggacaacgt 240
Query: 967 gctcttcatcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcgatcga 1026
|||| |||| |||||||||| ||||| || ||||||||||| |||||||||||||||||
Sbjct: 241 cctctacatcatcgagaacatcaacgtcgccgcgatcgagacgacgctgtggtcgatcga 300
Query: 1027 gtgggcggtcgctgagctggtgaaccacccggagatccagcagaagctgcggcaggagct 1086
||||| | |||| ||||||||||||||||||||||||||||||||||||||| | ||| |
Sbjct: 301 gtgggggctcgcggagctggtgaaccacccggagatccagcagaagctgcgggacgagat 360
Query: 1087 ggacacggtgctcgg-gccgggccaccagatcacggagccggacacgcacaacctcccct 1145
|||| ||||||| || | |||| |||||||||||||||||||||||||||| || ||||
Sbjct: 361 ggacgcggtgctgggcgtcggg-caccagatcacggagccggacacgcacaggctgccct 419
Query: 1146 acctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctggtgc 1205
||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 420 acctgcaagcggtgatcaaggagacgctgcggctgcgcatggccatcccgctgctggtgc 479
Query: 1206 cgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagcaaga 1265
| |||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||||
Sbjct: 480 cccacatgaacctccacgacgccaagctcgccggctacaacatccccgccgagagcaaga 539
Query: 1266 tcctcgtcaacgcctggtacctcgccaacaaccc 1299
|||||||||||||||||| |||||||||||||||
Sbjct: 540 tcctcgtcaacgcctggttcctcgccaacaaccc 573
>gb|BQ758724.1|BQ758724 EBma07_SQ002_J15_R maternal, 21 DPA, no treatment, cv Optic, EBma07
Hordeum vulgare subsp. vulgare cDNA clone
EBma07_SQ002_J15 5', mRNA sequence
Length = 490
Score = 587 bits (296), Expect = e-166
Identities = 402/436 (92%), Gaps = 2/436 (0%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 4 ccctacctgcaagcggtgatcaaggagacgctgcggctgcgcatggccatcccgctgctg 63
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
||||| |||||||||||||||||||||||||||| ||| ||| |||||||||||||||||
Sbjct: 64 gtgccccacatgaacctccacgacgccaagctcgccggctacaacatccccgccgagagc 123
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccga-cagytggaggcggcccga 1320
|||||||||||||||||||||| ||||||||||||||| || ||| |||| |||||| ||
Sbjct: 124 aagatcctcgtcaacgcctggttcctcgccaacaacccggagcag-tggaagcggccgga 182
Query: 1321 ggagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacga 1380
||||||||||| ||||| ||| | ||||||||||||||||| |||||||| ||||||||
Sbjct: 183 cgagttccggccggagcgcttcctggaggaggagaagcacgtggaggccaatggcaacga 242
Query: 1381 cttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccct 1440
||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| ||
Sbjct: 243 cttcaggtacctgcccttcggcgtcggccgccggagctgccccggcatcatcctcgcgct 302
Query: 1441 gcccatcctcggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgcc 1500
|||||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||
Sbjct: 303 gcccatcctcggcatcaccatcggccgcctcgtccagaacttcgtgctctcgccgccgcc 362
Query: 1501 cgggcaggacaaggtngacaccaccgagaagggaggccagttcagtctccacatcttgaa 1560
||| ||||||||| | |||||||| |||||||| ||||||||||| ||||||||||||||
Sbjct: 363 cggccaggacaagctcgacaccacggagaagggcggccagttcagcctccacatcttgaa 422
Query: 1561 gcattccaccatcgtg 1576
||| ||||||||||||
Sbjct: 423 gcactccaccatcgtg 438
>gb|CA026572.1|CA026572 HZ56E18r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ56E18
5-PRIME, mRNA sequence
Length = 425
Score = 550 bits (277), Expect = e-155
Identities = 385/421 (91%)
Strand = Plus / Plus
Query: 302 cagcgcaacctggtggtggtctcgtcgccgccgctggcgcgggaggtgctccacacgcag 361
|||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||
Sbjct: 5 cagcgcaacctggtggtggtgtcgtccccgccgctggcgcgggaggtgctgcacacgcag 64
Query: 362 ggcgtggagttcggctcccgcacccgcaacgtggtcttcgacatcttcacggacaagggg 421
|||||||||||||| |||||||||||||||||||| |||||||||||||| | | ||||
Sbjct: 65 ggcgtggagttcgggtcccgcacccgcaacgtggtgttcgacatcttcaccggcgagggc 124
Query: 422 caggacatggtgttcaccgtgtacggcgaccactggcgcaagatgcgccgcatcatgacc 481
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 125 caggacatggtgttcaccgtgtacggcgaccactggcgcaagatgcggcgcatcatgacc 184
Query: 482 gtgcccttcttcaccaacaaggtcgtgcagcagtaccgccacggctgggaggccgaggcc 541
||||||||||||||||||||||| |||||||||||||| | ||| ||||||||||||||
Sbjct: 185 gtgcccttcttcaccaacaaggtggtgcagcagtaccggcccgggtgggaggccgaggcg 244
Query: 542 gccgccgtcgtcgacgacgtgcgcctcgaccccaaggcggccaccgacggaatcgtgctc 601
||| ||| || ||| |||| || |||||||| ||| |||||||| || ||||||||
Sbjct: 245 gccttcgtggtggacaacgtccgggccgaccccagggccgccaccgagggcgtcgtgctc 304
Query: 602 cgccgacgcctgcagctcatgatgtacaacaacgtataccggatcatgttcgaccggcgc 661
||||| | ||||||||||||||||||||||||| | ||||| |||||||||||||||||
Sbjct: 305 cgccgccacctgcagctcatgatgtacaacaacatgtaccgcatcatgttcgaccggcgg 364
Query: 662 ttcgagagcatggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagc 721
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 365 ttcgagagcatggacgacccgctcttcctccgcctccgggcgctcaacggcgagcgcagc 424
Query: 722 c 722
|
Sbjct: 425 c 425
>gb|BI955765.1|BI955765 HVSMEm0024G17f Hordeum vulgare green seedling EST library HVcDNA0014
(Blumeria infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEm0024G17f, mRNA sequence
Length = 696
Score = 524 bits (264), Expect = e-147
Identities = 449/507 (88%), Gaps = 4/507 (0%)
Strand = Plus / Plus
Query: 1020 cgatcgagtgggcggtcgctgagctggtgaaccacccggagatccagcagaagctgcggc 1079
|||||||||||| | || | |||||||||||||||||||||||||||||||||||||||
Sbjct: 16 cgatcgagtgggggctcncggagctggtgaaccacccggagatccagcagaagctgcggg 75
Query: 1080 aggagctggacacggtgctcgg-gccgggccaccagatcacggagccggacacgcacaac 1138
| ||| ||||| ||||||| || | ||||| || ||||||||||||||||||||||||
Sbjct: 76 acgagatggacgcggtgctgggcgtcgggcaac-agatcacggagccggacacgcacagg 134
Query: 1139 ctcccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctg 1198
|| ||||||||||| ||||||||||||| | | | || |||| |||||||||||||||
Sbjct: 135 ctgccctacctgcaagcggtgatcaaggggggggggggggtgcgcatggccatcccgctg 194
Query: 1199 ctggtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgag 1258
|||||||| |||||||||||||||||||||||||||| ||| ||| ||||||||||||||
Sbjct: 195 ctggtgccccacatgaacctccacgacgccaagctcgccggctacaacatccccgccgag 254
Query: 1259 agcaagatcctcgtcaacgcctggtacctcgccaacaaccccga-cagytggaggcggcc 1317
||||||||||||||||||||||||| ||||||||||||||| || ||| |||| ||||||
Sbjct: 255 agcaagatcctcgtcaacgcctggttcctcgccaacaacccggagcag-tggaagcggcc 313
Query: 1318 cgaggagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaa 1377
|| ||||||||||| ||||| ||| | ||||||||||||||||| |||||||| |||||
Sbjct: 314 ggacgagttccggccggagcgcttcctggaggaggagaagcacgtggaggccaatggcaa 373
Query: 1378 cgacttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgc 1437
|||||||| ||||||||||||||||||||||||| ||||||| ||||| ||||| |||||
Sbjct: 374 cgacttcacgtacctgcccttcggcgtcggccgccggagctgtcccggcatcatgctcgc 433
Query: 1438 cctgcccatcctcggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgcc 1497
|||||||||||||||||||||||||| ||||||||||| ||||||| ||| |||| |
Sbjct: 434 gctgcccatcctcggcatcaccatcgggcgcctcgtccataacttcgtgctcacgccggc 493
Query: 1498 gcccgggcaggacaaggtngacaccac 1524
|||||| ||||||||| | ||||||||
Sbjct: 494 gcccggccaggacaagcttgacaccac 520
>gb|BF253423.2|BF253423 HVSMEf0001G03f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0001G03f, mRNA sequence
Length = 843
Score = 494 bits (249), Expect = e-138
Identities = 378/421 (89%)
Strand = Plus / Plus
Query: 90 tcttcgtggagaagctcctggtcggcctcttggcgtccgtcatggtcgccatcgcggtgt 149
|||||||||||||||||||||| |||||| | ||| |||| ||| |||||||| |||||
Sbjct: 139 tcttcgtggagaagctcctggtgggcctcctcgcggccgtggtgggcgccatcgtggtgt 198
Query: 150 ccaagatccgtggccgcaagctccggctgcctcccggccccgtccccgtgcccgtcttcg 209
|||||||||| ||||||||||| ||||||| || |||||| |||| |||||| ||||||
Sbjct: 199 ccaagatccggggccgcaagctgaggctgccgccgggccccatcccggtgcccatcttcg 258
Query: 210 ggaactggctgcaggtcggcgacgacctcaaccaccgcaacctcgccgcgctgtcccgca 269
| |||||||||||||||||||||||||| |||||||||||||| || ||| || ||||||
Sbjct: 259 gcaactggctgcaggtcggcgacgacctgaaccaccgcaacctggcggcgatggcccgca 318
Query: 270 agttcggcgacgtcttcctcctccggatggggcagcgcaacctggtggtggtctcgtcgc 329
|||||||||| || ||||||||||| ||||| |||||||||||||||||||| ||||| |
Sbjct: 319 agttcggcgaggtgttcctcctccgcatgggccagcgcaacctggtggtggtgtcgtccc 378
Query: 330 cgccgctggcgcgggaggtgctccacacgcagggcgtggagttcggctcccgcacccgca 389
|||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||
Sbjct: 379 cgccgctggcgcgggaggtgctgcacacgcagggcgtggagttcgggtcccgcacccgca 438
Query: 390 acgtggtcttcgacatcttcacggacaaggggcaggacatggtgttcaccgtgtacggcg 449
||||||| |||||||||||||| | | |||| |||||||||||||||||||||||||| |
Sbjct: 439 acgtggtgttcgacatcttcaccggcgagggccaggacatggtgttcaccgtgtacggtg 498
Query: 450 accactggcgcaagatgcgccgcatcatgaccgtgcccttcttcaccaacaaggtcgtgc 509
||||||||||||||||||| |||| ||||||||||||| || ||||||||||| ||||
Sbjct: 499 accactggcgcaagatgcggagcatagtgaccgtgccctttttgaccaacaaggtggtgc 558
Query: 510 a 510
|
Sbjct: 559 a 559
>gb|CA026832.1|CA026832 HZ57B14r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ57B14
5-PRIME, mRNA sequence
Length = 400
Score = 486 bits (245), Expect = e-135
Identities = 349/381 (91%), Gaps = 2/381 (0%)
Strand = Plus / Plus
Query: 803 tgcaaggaggtcaaggagacccgcctcaagctcttcaaggatttcttcctcgaggagagg 862
||||||||||||||||||||||||||||||||||||||||||| |||||| || ||||||
Sbjct: 20 tgcaaggaggtcaaggagacccgcctcaagctcttcaaggattacttcctagacgagagg 79
Query: 863 aagaagctggcgagcaccaaggccacggacagcaacggcctcaagtgcgccattgatcac 922
||||||||||||||||||||||||| ||||| |||||| |||||||||||||||||||||
Sbjct: 80 aagaagctggcgagcaccaaggccatggacaacaacggactcaagtgcgccattgatcac 139
Query: 923 atactggaggcacagcagaagggtgagatcaacgaggacaacgtgctcttcatcgtcgag 982
|| || |||||| |||||||||| |||||||||||||||||||| |||| |||| |||||
Sbjct: 140 atcctcgaggcagagcagaagggggagatcaacgaggacaacgtcctctacatcatcgag 199
Query: 983 aacattaacgttgcagcgatcgagaccacgctgtggtcgatcgagtgggcggtcgctgag 1042
||||| ||||| || ||||||||||| |||||||||||||||||||||| | |||| |||
Sbjct: 200 aacatcaacgtcgccgcgatcgagacgacgctgtggtcgatcgagtgggggctcgcggag 259
Query: 1043 ctggtgaaccacccggagatccagcagaagctgcggcaggagctggacacggtgctcgg- 1101
|||||||||||||||||||||||||||||||||||| | ||| ||||| ||||||| ||
Sbjct: 260 ctggtgaaccacccggagatccagcagaagctgcgggacgagatggacgcggtgctgggc 319
Query: 1102 gccgggccaccagatcacggagccggacacgcacaacctcccctacctgcaggcggtgat 1161
| |||| |||||||||||||||||||||||||||| || ||||||||||| ||||||||
Sbjct: 320 gtcggg-caccagatcacggagccggacacgcacaggctgccctacctgcaagcggtgat 378
Query: 1162 caaggagacgctgcggctgcg 1182
|||||||||||||||||||||
Sbjct: 379 caaggagacgctgcggctgcg 399
>gb|BG300103.1|BG300103 HVSMEb0011H20f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0011H20f, mRNA sequence
Length = 536
Score = 472 bits (238), Expect = e-131
Identities = 358/397 (90%), Gaps = 1/397 (0%)
Strand = Plus / Plus
Query: 90 tcttcgtggagaagctcctggtcggcctcttggcgtccgtcatggtcgccatcgcggtgt 149
|||||||||||||||||||||| |||||| | ||| |||| ||| |||||||| |||||
Sbjct: 139 tcttcgtggagaagctcctggtgggcctcctcgcggccgtggtgggcgccatcgtggtgt 198
Query: 150 ccaagatccgtggccgcaagctccggctgcctcccggccccgtccccgtgcccgtcttcg 209
|||||||||| ||||||||||| ||||||| || |||||| |||| |||||| ||||||
Sbjct: 199 ccaagatccggggccgcaagctgaggctgccgccgggccccatcccggtgcccatcttcg 258
Query: 210 ggaactggctgcaggtcggcgacgacctcaaccaccgcaacctcgccgcgctgtcccgca 269
| |||||||||||||||||||||||||| |||||||||||||| || ||| || ||||||
Sbjct: 259 gcaactggctgcaggtcggcgacgacctgaaccaccgcaacctggcggcgatggcccgca 318
Query: 270 agttcggcgacgtcttcctcctccggatggggcagcgcaacctggtggtggtctcgtcgc 329
|||||||||| || ||||||||||| ||||| |||||||||||||||||||| ||||| |
Sbjct: 319 agttcggcgaggtgttcctcctccgcatgggccagcgcaacctggtggtggtgtcgtccc 378
Query: 330 cgccgctggcgcgggaggtgctccacacgcagggcgtggagttcggctcccgcacccgca 389
|||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||
Sbjct: 379 cgccgctggcgcgggaggtgctgcacacgcagggcgtggagttcgggtcccgcacccgca 438
Query: 390 acgtggtcttcgacatcttcacggacaaggggcaggacatggtgttcaccgtgtacggcg 449
||||||| |||||||||||||| | | |||| || |||||||||||||||||||||||||
Sbjct: 439 acgtggtgttcgacatcttcaccggcgagggccangacatggtgttcaccgtgtacggcg 498
Query: 450 accac-tggcgcaagatgcgccgcatcatgaccgtgc 485
||||| ||||||| |||||| ||||||||||||||||
Sbjct: 499 accacttggcgcaggatgcggcgcatcatgaccgtgc 535
>gb|CA023650.1|CA023650 HZ46P09r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ46P09
5-PRIME, mRNA sequence
Length = 501
Score = 470 bits (237), Expect = e-131
Identities = 334/365 (91%), Gaps = 2/365 (0%)
Strand = Plus / Plus
Query: 1213 gaacctccacgacgccaagctcggcggntacgacatccccgccgagagcaagatcctcgt 1272
||||||||||||||||||||||| ||| ||| ||||||||||||||||||||||||||||
Sbjct: 1 gaacctccacgacgccaagctcgccggctacaacatccccgccgagagcaagatcctcgt 60
Query: 1273 caacgcctggtacctcgccaacaaccccga-cagytggaggcggcccgaggagttccggc 1331
||||||||||| ||||||||||||||| || ||| |||| |||||| || ||||||||||
Sbjct: 61 caacgcctggttcctcgccaacaacccggagcag-tggaagcggccggacgagttccggc 119
Query: 1332 ccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgacttcaggtacc 1391
| ||||| ||| | ||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct: 120 cggagcgcttcctggaggaggagaagcacgtggaggccaatggcaacgacttcaggtacc 179
Query: 1392 tgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctgcccatcctcg 1451
|||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||
Sbjct: 180 tgcccttcggcgtcggccgccggagctgccccggcatcatcctcgcgctgcccatcctcg 239
Query: 1452 gcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgcccgggcaggaca 1511
||||||||||||| ||||||||||||||||||| ||| |||||||||||| |||||||
Sbjct: 240 gcatcaccatcggccgcctcgtccagaacttcgtgctctcgccgccgcccggccaggaca 299
Query: 1512 aggtngacaccaccgagaagggaggccagttcagtctccacatcttgaagcattccacca 1571
|| | |||||||| |||||||| ||||||||||| ||||||||||||||||| |||||||
Sbjct: 300 agctcgacaccacggagaagggcggccagttcagcctccacatcttgaagcactccacca 359
Query: 1572 tcgtg 1576
|||||
Sbjct: 360 tcgtg 364
>gb|BE215541.1|BE215541 HV_CEb0008B12f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0008B12f, mRNA sequence
Length = 531
Score = 466 bits (235), Expect = e-129
Identities = 343/379 (90%)
Strand = Plus / Plus
Query: 90 tcttcgtggagaagctcctggtcggcctcttggcgtccgtcatggtcgccatcgcggtgt 149
|||||||||||||||||||||| |||||| | ||| |||| ||| |||||||| |||||
Sbjct: 150 tcttcgtggagaagctcctggtgggcctcctcgcggccgtggtgggcgccatcgtggtgt 209
Query: 150 ccaagatccgtggccgcaagctccggctgcctcccggccccgtccccgtgcccgtcttcg 209
|||||||||| ||||||||||| ||||||| || |||||| |||| |||||| ||||||
Sbjct: 210 ccaagatccggggccgcaagctgaggctgccgccgggccccatcccggtgcccatcttcg 269
Query: 210 ggaactggctgcaggtcggcgacgacctcaaccaccgcaacctcgccgcgctgtcccgca 269
| |||||||||||||||||||||||||| |||||||||||||| || ||| || ||||||
Sbjct: 270 gtaactggctgcaggtcggcgacgacctgaaccaccgcaacctggcggcgatggcccgca 329
Query: 270 agttcggcgacgtcttcctcctccggatggggcagcgcaacctggtggtggtctcgtcgc 329
|||||||||| || ||||||||||| ||||| |||||||||||||||||||| ||||| |
Sbjct: 330 agttcggcgaggtgttcctcctccgcatgggccagcgcaacctggtggtggtgtcgtccc 389
Query: 330 cgccgctggcgcgggaggtgctccacacgcagggcgtggagttcggctcccgcacccgca 389
|||||||||||||||||||||| |||||||| |||||||||||||| |||||||||||||
Sbjct: 390 cgccgctggcgcgggaggtgctgcacacgcatggcgtggagttcgggtcccgcacccgca 449
Query: 390 acgtggtcttcgacatcttcacggacaaggggcaggacatggtgttcaccgtgtacggcg 449
||||||| |||||||||||||| | | |||| ||||||||||||||||||||||||||||
Sbjct: 450 acgtggtgttcgacatcttcaccggcgagggccaggacatggtgttcaccgtgtacggcg 509
Query: 450 accactggcgcaagatgcg 468
|||||||||||||||||||
Sbjct: 510 accactggcgcaagatgcg 528
>gb|BQ471910.1|BQ471910 HV03N12r HV Hordeum vulgare subsp. vulgare cDNA clone HV03N12
5-PRIME, mRNA sequence
Length = 498
Score = 415 bits (209), Expect = e-114
Identities = 314/349 (89%)
Strand = Plus / Plus
Query: 90 tcttcgtggagaagctcctggtcggcctcttggcgtccgtcatggtcgccatcgcggtgt 149
|||||||||||||||||||||| |||||| | ||| |||| ||| |||||||| |||||
Sbjct: 150 tcttcgtggagaagctcctggtgggcctcctcgcggccgtggtgggcgccatcgtggtgt 209
Query: 150 ccaagatccgtggccgcaagctccggctgcctcccggccccgtccccgtgcccgtcttcg 209
|||||||||| ||||||||||| ||||||| || |||||| |||| |||||| ||||||
Sbjct: 210 ccaagatccggggccgcaagctgaggctgccgccgggccccatcccggtgcccatcttcg 269
Query: 210 ggaactggctgcaggtcggcgacgacctcaaccaccgcaacctcgccgcgctgtcccgca 269
| |||||||||||||||||||||||||| |||||||||||||| || ||| || ||||||
Sbjct: 270 gtaactggctgcaggtcggcgacgacctgaaccaccgcaacctggcggcgatggcccgca 329
Query: 270 agttcggcgacgtcttcctcctccggatggggcagcgcaacctggtggtggtctcgtcgc 329
|||||||||| || ||||||||||| ||||| |||||||||||||||||||| ||||| |
Sbjct: 330 agttcggcgaggtgttcctcctccgcatgggccagcgcaacctggtggtggtgtcgtccc 389
Query: 330 cgccgctggcgcgggaggtgctccacacgcagggcgtggagttcggctcccgcacccgca 389
|||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||
Sbjct: 390 cgccgctggcgcgggaggtgctgcacacgcagggcgtggagttcgggtcccgcacccgca 449
Query: 390 acgtggtcttcgacatcttcacggacaaggggcaggacatggtgttcac 438
||||||| |||||||||||||| | | |||| |||||||||||||||||
Sbjct: 450 acgtggtgttcgacatcttcaccggcgagggccaggacatggtgttcac 498
>gb|CA025677.1|CA025677 HZ52M20r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ52M20
5-PRIME, mRNA sequence
Length = 465
Score = 413 bits (208), Expect = e-113
Identities = 387/448 (86%)
Strand = Plus / Plus
Query: 1138 cctcccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgct 1197
|||||||||||||||| | || | ||||||||||| || || || ||||||||||||||
Sbjct: 1 cctcccctacctgcagtccgtcgtgaaggagacgctccgcctccgcatggccatcccgct 60
Query: 1198 gctggtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccga 1257
||||||||||||||||||||| ||| |||||||||| ||| |||||||||||||||||
Sbjct: 61 cctggtgccgcacatgaacctcagcgatgccaagctcgccggttacgacatccccgccga 120
Query: 1258 gagcaagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcc 1317
||||||||||||||||||||||| |||||||||| ||||| | | ||| ||| |
Sbjct: 121 atccaagatcctcgtcaacgcctggttcctcgccaacgaccccaagcggtgggtgcgcgc 180
Query: 1318 cgaggagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaa 1377
||| |||||| |||||||||| ||| |||||||||||||| |||||||||| |||||||
Sbjct: 181 cgacgagttcaggcccgagcgcttcctcgaggaggagaagtccgtcgaggcccacggcaa 240
Query: 1378 cgacttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgc 1437
||||||| ||| | |||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 241 cgacttccggttcgtgcccttcggcgtcggccgccggagctgccccgggatcatcctcgc 300
Query: 1438 cctgcccatcctcggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgcc 1497
||||||||| |||||||||| |||| ||||| || |||||||||||||||||||||||
Sbjct: 301 gctgcccatcatcggcatcacgctcggacgcctggtgcagaacttcgagctgctgccgcc 360
Query: 1498 gcccgggcaggacaaggtngacaccaccgagaagggaggccagttcagtctccacatctt 1557
||| |||||||||||| | ||||||||||||||| ||| |||||||| ||| ||| |
Sbjct: 361 gccggggcaggacaagatcgacaccaccgagaagccagggcagttcagcaaccagatcct 420
Query: 1558 gaagcattccaccatcgtgtgcaagcca 1585
||||| |||||||||| |||||||||
Sbjct: 421 caagcacgccaccatcgtctgcaagcca 448
>gb|AV921527.1|AV921527 AV921527 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags23l19 3', mRNA sequence
Length = 598
Score = 387 bits (195), Expect = e-106
Identities = 347/399 (86%)
Strand = Plus / Minus
Query: 1187 gccatcccgctgctggtgccgcacatgaacctccacgacgccaagctcggcggntacgac 1246
||||||||||| ||||||||||||||||||||| ||| |||||||||| ||| ||||||
Sbjct: 598 gccatcccgctcctggtgccgcacatgaacctcagcgatgccaagctcgccggttacgac 539
Query: 1247 atccccgccgagagcaagatcctcgtcaacgcctggtacctcgccaacaaccccgacagy 1306
||||||||||| ||||||||||||||||||||||| |||||||||| ||||| | |
Sbjct: 538 atccccgccgaatccaagatcctcgtcaacgcctggttcctcgccaacgaccccaagcgg 479
Query: 1307 tggaggcggcccgaggagttccggcccgagcgattcytcgaggaggagaagcacgtcgag 1366
||| ||| |||| |||||| |||||||||| ||| |||||||||||||| |||||||
Sbjct: 478 tgggtgcgcgccgacgagttcaggcccgagcgcttcctcgaggaggagaagtccgtcgag 419
Query: 1367 gccaacggcaacgacttcaggtacctgcccttcggcgtcggccgcaggagctgccccggg 1426
||| |||||||||||||| ||| | |||||||||||||||||||| ||||||||||||||
Sbjct: 418 gcccacggcaacgacttccggttcgtgcccttcggcgtcggccgccggagctgccccggg 359
Query: 1427 atcatcctcgccctgcccatcctcggcatcaccatcggtcgcctcgtccagaacttcgag 1486
||||||||||| ||||||||| |||||||||| |||| ||||| || ||||||||||||
Sbjct: 358 atcatcctcgcgctgcccatcatcggcatcacgctcggacgcctggtgcagaacttcgag 299
Query: 1487 ctgctgccgccgcccgggcaggacaaggtngacaccaccgagaagggaggccagttcagt 1546
|||||||||||||| |||||||||||| | ||||||||||||||| ||| ||||||||
Sbjct: 298 ctgctgccgccgccggggcaggacaagatcgacaccaccgagaagccagggcagttcagc 239
Query: 1547 ctccacatcttgaagcattccaccatcgtgtgcaagcca 1585
||| ||| | ||||| |||||||||| |||||||||
Sbjct: 238 aaccagatcctcaagcacgccaccatcgtctgcaagcca 200
>gb|AV922603.1|AV922603 AV922603 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags18n15 3', mRNA sequence
Length = 615
Score = 387 bits (195), Expect = e-106
Identities = 347/399 (86%)
Strand = Plus / Minus
Query: 1187 gccatcccgctgctggtgccgcacatgaacctccacgacgccaagctcggcggntacgac 1246
||||||||||| ||||||||||||||||||||| ||| |||||||||| ||| ||||||
Sbjct: 615 gccatcccgctcctggtgccgcacatgaacctcagcgatgccaagctcgccggttacgac 556
Query: 1247 atccccgccgagagcaagatcctcgtcaacgcctggtacctcgccaacaaccccgacagy 1306
||||||||||| ||||||||||||||||||||||| |||||||||| ||||| | |
Sbjct: 555 atccccgccgaatccaagatcctcgtcaacgcctggttcctcgccaacgaccccaagcgg 496
Query: 1307 tggaggcggcccgaggagttccggcccgagcgattcytcgaggaggagaagcacgtcgag 1366
||| ||| |||| |||||| |||||||||| ||| |||||||||||||| |||||||
Sbjct: 495 tgggtgcgcgccgacgagttcaggcccgagcgcttcctcgaggaggagaagtccgtcgag 436
Query: 1367 gccaacggcaacgacttcaggtacctgcccttcggcgtcggccgcaggagctgccccggg 1426
||| |||||||||||||| ||| | |||||||||||||||||||| ||||||||||||||
Sbjct: 435 gcccacggcaacgacttccggttcgtgcccttcggcgtcggccgccggagctgccccggg 376
Query: 1427 atcatcctcgccctgcccatcctcggcatcaccatcggtcgcctcgtccagaacttcgag 1486
||||||||||| ||||||||| |||||||||| |||| ||||| || ||||||||||||
Sbjct: 375 atcatcctcgcgctgcccatcatcggcatcacgctcggacgcctggtgcagaacttcgag 316
Query: 1487 ctgctgccgccgcccgggcaggacaaggtngacaccaccgagaagggaggccagttcagt 1546
|||||||||||||| |||||||||||| | ||||||||||||||| ||| ||||||||
Sbjct: 315 ctgctgccgccgccggggcaggacaagatcgacaccaccgagaagccagggcagttcagc 256
Query: 1547 ctccacatcttgaagcattccaccatcgtgtgcaagcca 1585
||| ||| | ||||| |||||||||| |||||||||
Sbjct: 255 aaccagatcctcaagcacgccaccatcgtctgcaagcca 217
>gb|AJ436646.1|AJ436646 AJ436646 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200035H01F1, mRNA sequence
Length = 621
Score = 375 bits (189), Expect = e-102
Identities = 341/393 (86%)
Strand = Plus / Plus
Query: 1193 ccgctgctggtgccgcacatgaacctccacgacgccaagctcggcggntacgacatcccc 1252
||||| ||||||||||||||||||||| ||| |||||||||| ||| ||||||||||||
Sbjct: 3 ccgctcctggtgccgcacatgaacctcagcgatgccaagctcgccggttacgacatcccc 62
Query: 1253 gccgagagcaagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggagg 1312
||||| ||||||||||||||||||||||| |||||||||| ||||| | | ||| |
Sbjct: 63 gccgaatccaagatcctcgtcaacgcctggttcctcgccaacgaccccaagcggtgggtg 122
Query: 1313 cggcccgaggagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaac 1372
|| |||| |||||| |||||||||| ||| |||||||||||||| |||||||||| ||
Sbjct: 123 cgcgccgacgagttcaggcccgagcgcttcctcgaggaggagaagtccgtcgaggcccac 182
Query: 1373 ggcaacgacttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatc 1432
|||||||||||| ||| | |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 183 ggcaacgacttccggttcgtgcccttcggcgtcggccgccggagctgccccgggatcatc 242
Query: 1433 ctcgccctgcccatcctcggcatcaccatcggtcgcctcgtccagaacttcgagctgctg 1492
||||| ||||||||| |||||||||| |||| ||||| || ||||||||||||||||||
Sbjct: 243 ctcgcgctgcccatcatcggcatcacgctcggacgcctggtgcagaacttcgagctgctg 302
Query: 1493 ccgccgcccgggcaggacaaggtngacaccaccgagaagggaggccagttcagtctccac 1552
|||||||| |||||||||||| | ||||||||||||||| ||| |||||||| |||
Sbjct: 303 ccgccgccggggcaggacaagatcgacaccaccgagaagccagggcagttcagcaaccag 362
Query: 1553 atcttgaagcattccaccatcgtgtgcaagcca 1585
||| | ||||| |||||||||| |||||||||
Sbjct: 363 atcctcaagcacgccaccatcgtctgcaagcca 395
>gb|BJ467535.1|BJ467535 BJ467535 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags25l03 3', mRNA sequence
Length = 568
Score = 373 bits (188), Expect = e-101
Identities = 340/392 (86%)
Strand = Plus / Minus
Query: 1194 cgctgctggtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccg 1253
|||| ||||||||||||||||||||| ||| |||||||||| ||| |||||||||||||
Sbjct: 568 cgctcctggtgccgcacatgaacctcagcgatgccaagctcgccggttacgacatccccg 509
Query: 1254 ccgagagcaagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggc 1313
|||| ||||||||||||||||||||||| |||||||||| ||||| | | ||| ||
Sbjct: 508 ccgaatccaagatcctcgtcaacgcctggttcctcgccaacgaccccaagcggtgggtgc 449
Query: 1314 ggcccgaggagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacg 1373
| |||| |||||| |||||||||| ||| |||||||||||||| |||||||||| |||
Sbjct: 448 gcgccgacgagttcaggcccgagcgcttcctcgaggaggagaagtccgtcgaggcccacg 389
Query: 1374 gcaacgacttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcc 1433
||||||||||| ||| | |||||||||||||||||||| |||||||||||||||||||||
Sbjct: 388 gcaacgacttccggttcgtgcccttcggcgtcggccgccggagctgccccgggatcatcc 329
Query: 1434 tcgccctgcccatcctcggcatcaccatcggtcgcctcgtccagaacttcgagctgctgc 1493
|||| ||||||||| |||||||||| |||| ||||| || |||||||||||||||||||
Sbjct: 328 tcgcgctgcccatcatcggcatcacgctcggacgcctggtgcagaacttcgagctgctgc 269
Query: 1494 cgccgcccgggcaggacaaggtngacaccaccgagaagggaggccagttcagtctccaca 1553
||||||| |||||||||||| | ||||||||||||||| ||| |||||||| ||| |
Sbjct: 268 cgccgccggggcaggacaagatcgacaccaccgagaagccagggcagttcagcaaccaga 209
Query: 1554 tcttgaagcattccaccatcgtgtgcaagcca 1585
|| | ||||| |||||||||| |||||||||
Sbjct: 208 tcctcaagcacgccaccatcgtctgcaagcca 177
>gb|BJ465891.1|BJ465891 BJ465891 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags27m08 3', mRNA sequence
Length = 577
Score = 371 bits (187), Expect = e-101
Identities = 336/387 (86%)
Strand = Plus / Minus
Query: 1199 ctggtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgag 1258
||||||||||||||||||||| ||| |||||||||| ||| |||||||||||||||||
Sbjct: 574 ctggtgccgcacatgaacctcagcgatgccaagctcgccggttacgacatccccgccgaa 515
Query: 1259 agcaagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggccc 1318
||||||||||||||||||||||| |||||||||| ||||| | | ||| ||| ||
Sbjct: 514 tccaagatcctcgtcaacgcctggttcctcgccaacgaccccaagcggtgggtgcgcgcc 455
Query: 1319 gaggagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaac 1378
|| |||||| |||||||||| ||| |||||||||||||| |||||||||| ||||||||
Sbjct: 454 gacgagttcaggcccgagcgcttcctcgaggaggagaagtccgtcgaggcccacggcaac 395
Query: 1379 gacttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgcc 1438
|||||| ||| | |||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 394 gacttccggttcgtgcccttcggcgtcggccgccggagctgccccgggatcatcctcgcg 335
Query: 1439 ctgcccatcctcggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccg 1498
||||||||| |||||||||| |||| ||||| || ||||||||||||||||||||||||
Sbjct: 334 ctgcccatcatcggcatcacgctcggacgcctggtgcagaacttcgagctgctgccgccg 275
Query: 1499 cccgggcaggacaaggtngacaccaccgagaagggaggccagttcagtctccacatcttg 1558
|| |||||||||||| | ||||||||||||||| ||| |||||||| ||| ||| |
Sbjct: 274 ccggggcaggacaagatcgacaccaccgagaagccagggcagttcagcaaccagatcctc 215
Query: 1559 aagcattccaccatcgtgtgcaagcca 1585
||||| |||||||||| |||||||||
Sbjct: 214 aagcacgccaccatcgtctgcaagcca 188
>gb|BI777730.2|BI777730 EBro08_SQ001_K12_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ001_K12 5', mRNA sequence
Length = 380
Score = 369 bits (186), Expect = e-100
Identities = 317/362 (87%)
Strand = Plus / Plus
Query: 1165 ggagacgctgcggctgcggatggccatcccgctgctggtgccgcacatgaacctccacga 1224
||||||||| || || || |||||||| ||||| ||||||||||||||||||||| |||
Sbjct: 19 ggagacgctccgcctccgcatggccatgccgctcctggtgccgcacatgaacctcagcga 78
Query: 1225 cgccaagctcggcggntacgacatccccgccgagagcaagatcctcgtcaacgcctggta 1284
|||||||||| ||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 79 tgccaagctcgccggttacgacatccccgccgaatccaagatcctcgtcaacgcctggtt 138
Query: 1285 cctcgccaacaaccccgacagytggaggcggcccgaggagttccggcccgagcgattcyt 1344
|||||||||| ||||| | | ||| ||| |||| |||||| |||||||||| ||| |
Sbjct: 139 cctcgccaacgaccccaagcggtgggtgcgcgccgacgagttcaggcccgagcgcttcct 198
Query: 1345 cgaggaggagaagcacgtcgaggccaacggcaacgacttcaggtacctgcccttcggcgt 1404
||||||||||||| |||||||||| |||||||||||||| ||| | |||||||||||||
Sbjct: 199 cgaggaggagaagtccgtcgaggcccacggcaacgacttccggttcgtgcccttcggcgt 258
Query: 1405 cggccgcaggagctgccccgggatcatcctcgccctgcccatcctcggcatcaccatcgg 1464
||||||| ||||||||||||||||||||||||| ||||||||| |||||||||| ||||
Sbjct: 259 cggccgccggagctgccccgggatcatcctcgcgctgcccatcatcggcatcacgctcgg 318
Query: 1465 tcgcctcgtccagaacttcgagctgctgccgccgcccgggcaggacaaggtngacaccac 1524
||||| || |||||||||||||||||||||||||| |||||||||||| | ||||||||
Sbjct: 319 acgcctggtgcagaacttcgagctgctgccgccgccggggcaggacaagatcgacaccac 378
Query: 1525 cg 1526
||
Sbjct: 379 cg 380
>gb|AJ435273.1|AJ435273 AJ435273 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200083F08F1, mRNA sequence
Length = 538
Score = 349 bits (176), Expect = 2e-094
Identities = 242/265 (91%)
Strand = Plus / Plus
Query: 1312 gcggcccgaggagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaa 1371
|||||| || ||||||||||| ||||| ||| | ||||||||||||||||| ||||||||
Sbjct: 5 gcggccggacgagttccggccggagcgcttcctggaggaggagaagcacgtggaggccaa 64
Query: 1372 cggcaacgacttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcat 1431
||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||
Sbjct: 65 tggcaacgacttcaggtacctgcccttcggcgtcggccgccggagctgccccggcatcat 124
Query: 1432 cctcgccctgcccatcctcggcatcaccatcggtcgcctcgtccagaacttcgagctgct 1491
|||||| |||||||||||||||||||||||||| ||||||||||||||||||| |||
Sbjct: 125 cctcgcgctgcccatcctcggcatcaccatcggccgcctcgtccagaacttcgtgctctc 184
Query: 1492 gccgccgcccgggcaggacaaggtngacaccaccgagaagggaggccagttcagtctcca 1551
|||||||||||| ||||||||| | |||||||| |||||||| ||||||||||| |||||
Sbjct: 185 gccgccgcccggccaggacaagctcgacaccacggagaagggcggccagttcagcctcca 244
Query: 1552 catcttgaagcattccaccatcgtg 1576
|||||||||||| ||||||||||||
Sbjct: 245 catcttgaagcactccaccatcgtg 269
>gb|BE216787.2|BE216787 HV_CEb0011J09f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0011J09f, mRNA sequence
Length = 891
Score = 331 bits (167), Expect = 4e-089
Identities = 260/291 (89%)
Strand = Plus / Plus
Query: 90 tcttcgtggagaagctcctggtcggcctcttggcgtccgtcatggtcgccatcgcggtgt 149
|||||||||||||||||||||| |||||| | ||| |||| ||| |||||||| |||||
Sbjct: 129 tcttcgtggagaagctcctggtgggcctcctcgcggccgtggtgggcgccatcgtggtgt 188
Query: 150 ccaagatccgtggccgcaagctccggctgcctcccggccccgtccccgtgcccgtcttcg 209
|||||||||| ||||||||||| ||||||| || |||||| |||| |||||| ||||||
Sbjct: 189 ccaagatccggggccgcaagctgaggctgccgccgggccccatcccggtgcccatcttcg 248
Query: 210 ggaactggctgcaggtcggcgacgacctcaaccaccgcaacctcgccgcgctgtcccgca 269
| |||||||||||||||||||||||||| |||||||||||||| || ||| || ||||||
Sbjct: 249 gtaactggctgcaggtcggcgacgacctgaaccaccgcaacctggcggcgatggcccgca 308
Query: 270 agttcggcgacgtcttcctcctccggatggggcagcgcaacctggtggtggtctcgtcgc 329
|||||||||| || ||||||||||| ||||| |||||||||||||||||||| |||| |
Sbjct: 309 agttcggcgaggtgttcctcctccgcatgggccagcgcaacctggtggtggtggcgtccc 368
Query: 330 cgccgctggcgcgggaggtgctccacacgcagggcgtggagttcggctccc 380
|||||||||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 369 cgccgctggcgcgggaggtgctgcacacgcagggcgtggagttcgggtccc 419
>gb|BQ665478.1|BQ665478 HX03M12u HX Hordeum vulgare subsp. vulgare cDNA clone HX03M12
3-PRIME, mRNA sequence
Length = 538
Score = 309 bits (156), Expect = 1e-082
Identities = 282/325 (86%)
Strand = Plus / Minus
Query: 1261 caagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccga 1320
||||||||||||||||||||||| |||||||||| ||||| | | ||| ||| ||||
Sbjct: 535 caagatcctcgtcaacgcctggttcctcgccaacgaccccaagcggtgggtgcgcgccga 476
Query: 1321 ggagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacga 1380
|||||| |||||||||| ||| |||||||||||||| |||||||||| ||||||||||
Sbjct: 475 cgagttcaggcccgagcgcttcctcgaggaggagaagtccgtcgaggcccacggcaacga 416
Query: 1381 cttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccct 1440
|||| ||| | |||||||||||||||||||| ||||||||||||||||||||||||| ||
Sbjct: 415 cttccggttcgtgcccttcggcgtcggccgccggagctgccccgggatcatcctcgcgct 356
Query: 1441 gcccatcctcggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgcc 1500
||||||| |||||||||| |||| ||||| || ||||||||||||||||||||||||||
Sbjct: 355 gcccatcatcggcatcacgctcggacgcctggtgcagaacttcgagctgctgccgccgcc 296
Query: 1501 cgggcaggacaaggtngacaccaccgagaagggaggccagttcagtctccacatcttgaa 1560
|||||||||||| | ||||||||||||||| ||| |||||||| ||| ||| | ||
Sbjct: 295 ggggcaggacaagatcgacaccaccgagaagccagggcagttcagcaaccagatcctcaa 236
Query: 1561 gcattccaccatcgtgtgcaagcca 1585
||| |||||||||| |||||||||
Sbjct: 235 gcacgccaccatcgtctgcaagcca 211
>gb|AU252323.1|AU252323 AU252323 salt-stressed barley root cDNA Hordeum vulgare subsp.
vulgare cDNA clone BR-C15 similar to trans-cinnamic acid
hydroxylase, mRNA sequence
Length = 484
Score = 306 bits (154), Expect = 2e-081
Identities = 209/228 (91%)
Strand = Plus / Minus
Query: 1349 gaggagaagcacgtcgaggccaacggcaacgacttcaggtacctgcccttcggcgtcggc 1408
|||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 420 gaggagaagcacgtggaggccaatgcaaacgacttcaggtacctgcccttcggcgtcggc 361
Query: 1409 cgcaggagctgccccgggatcatcctcgccctgcccatcctcggcatcaccatcggtcgc 1468
||| ||||||||||||| ||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 360 cgccggagctgccccggcatcatcctcgcgctgcccatcctcggcatcaccatcggccgc 301
Query: 1469 ctcgtccagaacttcgagctgctgccgccgcccgggcaggacaaggtngacaccaccgag 1528
|||||||||||||||| ||| |||||||||||| ||||||||| | |||||||| |||
Sbjct: 300 ctcgtccagaacttcgtgctctngccgccgcccggccaggacaagctcgacaccacggag 241
Query: 1529 aagggaggccagttcagtctccacatcttgaagcattccaccatcgtg 1576
||||| ||||||||||| ||||||||||||||||| ||||||||||||
Sbjct: 240 aagggcggccagttcagcctccacatcttgaagcactccaccatcgtg 193
>gb|BF618363.2|BF618363 HVSMEc0005H12f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0005H12f, mRNA sequence
Length = 595
Score = 280 bits (141), Expect = 1e-073
Identities = 248/281 (88%), Gaps = 2/281 (0%)
Strand = Plus / Plus
Query: 90 tcttcgtggagaagctcctggtcggcctcttggcgtccgtcatggtcgccatcgcggtgt 149
|||||||||||||||||||||| |||||| | ||| |||| ||| |||||||| |||||
Sbjct: 129 tcttcgtggagaagctcctggtgggcctcctcgcggccgtggtgggcgccatcgtggtgt 188
Query: 150 ccaagatccgtggccgcaagctccggctgcctcccggccccgtccccgtgcccgtcttcg 209
|||||||||| ||||||||||| ||||||| || |||||| |||| |||||| ||||||
Sbjct: 189 ccaagatccggggccgcaagctgaggctgccgccgggccccatcccggtgcccatcttcg 248
Query: 210 ggaactggctgcaggtcggcgacgacctcaaccaccgcaacctcgccgcgctgtcccgca 269
| |||||||||||||||||||||||||| |||||||||||||| || ||| || ||||||
Sbjct: 249 gaaactggctgcaggtcggcgacgacctgaaccaccgcaacctggcggcgatggcccgca 308
Query: 270 agttcggcgacgtcttcctcctccggatggggcagcgcaacctggtggtggtctcgtcgc 329
|||||||||| || ||||||||||||||||| |||||||||||||||| ||| ||||| |
Sbjct: 309 agttcggcgaggtgttcctcctccggatgggccagcgcaacctggtgggggtgtcgtccc 368
Query: 330 cgccgc-tggcgcgggaggtgctccacacgcagggcgtgga 369
|||||| |||||| ||| ||||| |||||||| ||||||||
Sbjct: 369 cgccgcttggcgc-ggaagtgctgcacacgcaaggcgtgga 408
Score = 73.9 bits (37), Expect = 2e-011
Identities = 50/53 (94%), Gaps = 1/53 (1%)
Strand = Plus / Plus
Query: 417 aggggcaggacatggtgttcaccgtgtacggcgaccac-tggcgcaagatgcg 468
|||| |||||||||||||| |||||||||||||||||| ||||||||||||||
Sbjct: 455 agggccaggacatggtgttaaccgtgtacggcgaccacttggcgcaagatgcg 507
>gb|BQ767241.1|BQ767241 EBro08_SQ008_I11_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ008_I11 5', mRNA sequence
Length = 492
Score = 264 bits (133), Expect = 8e-069
Identities = 223/254 (87%)
Strand = Plus / Plus
Query: 1332 ccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgacttcaggtacc 1391
||||||| ||| |||||||||||||| |||||||||| |||||||||||||| ||| |
Sbjct: 1 ccgagcgcttcctcgaggaggagaagtccgtcgaggcccacggcaacgacttccggttcg 60
Query: 1392 tgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctgcccatcctcg 1451
|||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| |||
Sbjct: 61 tgcccttcggcgtcggccgccggagctgccccgggatcatcctcgcgctgcccatcatcg 120
Query: 1452 gcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgcccgggcaggaca 1511
||||||| |||| ||||| || |||||||||||||||||||||||||| ||||||||||
Sbjct: 121 gcatcacgctcggacgcctggtgcagaacttcgagctgctgccgccgccggggcaggaca 180
Query: 1512 aggtngacaccaccgagaagggaggccagttcagtctccacatcttgaagcattccacca 1571
|| | ||||||||||||||| ||| |||||||| ||| ||| | ||||| ||||||
Sbjct: 181 agatcgacaccaccgagaagccagggcagttcagcaaccagatcctcaagcacgccacca 240
Query: 1572 tcgtgtgcaagcca 1585
|||| |||||||||
Sbjct: 241 tcgtctgcaagcca 254
>gb|BG345061.2|BG345061 HVSMEg0018H23f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0018H23f, mRNA sequence
Length = 481
Score = 254 bits (128), Expect = 8e-066
Identities = 215/245 (87%)
Strand = Plus / Plus
Query: 1341 tcytcgaggaggagaagcacgtcgaggccaacggcaacgacttcaggtacctgcccttcg 1400
|| |||||||||||||| |||||||||| |||||||||||||| ||| | |||||||||
Sbjct: 1 tcctcgaggaggagaagtccgtcgaggcccacggcaacgacttccggttcgtgcccttcg 60
Query: 1401 gcgtcggccgcaggagctgccccgggatcatcctcgccctgcccatcctcggcatcacca 1460
||||||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 61 gcgtcggccgccggagctgccccgggatcatcctcgcgctgcccatcatcggcatcacgc 120
Query: 1461 tcggtcgcctcgtccagaacttcgagctgctgccgccgcccgggcaggacaaggtngaca 1520
|||| ||||| || |||||||||||||||||||||||||| |||||||||||| | ||||
Sbjct: 121 tcggacgcctggtgcagaacttcgagctgctgccgccgccggggcaggacaagatcgaca 180
Query: 1521 ccaccgagaagggaggccagttcagtctccacatcttgaagcattccaccatcgtgtgca 1580
||||||||||| ||| |||||||| ||| ||| | ||||| |||||||||| ||||
Sbjct: 181 ccaccgagaagccagggcagttcagcaaccagatcctcaagcacgccaccatcgtctgca 240
Query: 1581 agcca 1585
|||||
Sbjct: 241 agcca 245
>gb|BE519761.3|BE519761 HV_CEb0021C04f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0021C04f, mRNA sequence
Length = 706
Score = 250 bits (126), Expect = 1e-064
Identities = 311/371 (83%), Gaps = 2/371 (0%)
Strand = Plus / Plus
Query: 1138 cctcccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgct 1197
|||||||||||||||| | || | ||||||||||| || || || ||||||||||||||
Sbjct: 333 cctcccctacctgcagtccgtcgtgaaggagacgctccgcctccgcatggccatcccgct 392
Query: 1198 gctggtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccga 1257
||||||||||||||||||||| ||| |||||||||| ||| |||||||||||||||||
Sbjct: 393 cctggtgccgcacatgaacctcagcgatgccaagctcgccggttacgacatccccgccga 452
Query: 1258 gagcaagatcctcgtcaacgcctggtacctcgccaac-aaccccgacagytggaggcggc 1316
|||||||||||| |||||||||| |||||||||| |||||| | | ||| |||
Sbjct: 453 atccaagatcctcgttaacgcctggttcctcgccaacgaaccccaagcggtgggtgcgcg 512
Query: 1317 ccgaggagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggca 1376
|||| |||||| ||||||||| ||| |||||||||||||| |||||||||| |||| |
Sbjct: 513 ccgacgagttcatgcccgagcgcttcctcgaggaggagaagtccgtcgaggcccacggta 572
Query: 1377 acgacttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcg 1436
|||||||| ||| | |||||||||| ||| |||| ||||||||||||||||||| || |
Sbjct: 573 acgacttccggttcgtgcccttcggggtccgccgacggagctgccccgggatcattcttg 632
Query: 1437 ccctgcccatcctcggcatcaccatcggtcgcctcgtccagaacttcgag-ctgctgccg 1495
| ||||||||| ||||||| || |||| | ||| || || || |||||| |||||||||
Sbjct: 633 cgctgcccatcatcggcattacgctcggacccctggtgcaaaaattcgagcctgctgccg 692
Query: 1496 ccgcccgggca 1506
||||| |||||
Sbjct: 693 ccgccggggca 703
Score = 165 bits (83), Expect = 6e-039
Identities = 152/175 (86%)
Strand = Plus / Plus
Query: 903 tcaagtgcgccattgatcacatactggaggcacagcagaagggtgagatcaacgaggaca 962
||||||||||||| || ||||| ||||| || | |||||| ||||||||| | ||||
Sbjct: 98 tcaagtgcgccatggaccacatcctggaagccgaaaggaagggcgagatcaaccacgaca 157
Query: 963 acgtgctcttcatcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcga 1022
|||| |||| ||||||||||||||| ||||| ||||| || ||||| |||||||||||||
Sbjct: 158 acgtcctctacatcgtcgagaacatcaacgtcgcagccattgagacgacgctgtggtcga 217
Query: 1023 tcgagtgggcggtcgctgagctggtgaaccacccggagatccagcagaagctgcg 1077
||||||||| |||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 218 tcgagtggggcctcgcggagctggtgaaccacccggagatccagcagaagctgcg 272
>gb|BU973663.1|BU973663 HB25J24r BC Hordeum vulgare subsp. vulgare cDNA clone HB25J24
5-PRIME, mRNA sequence
Length = 485
Score = 250 bits (126), Expect = 1e-064
Identities = 170/185 (91%)
Strand = Plus / Plus
Query: 1392 tgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctgcccatcctcg 1451
|||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||
Sbjct: 11 tgcccttcggcgtcggccgccggagctgccccggcatcatcctcgcgctgcccatcctcg 70
Query: 1452 gcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgcccgggcaggaca 1511
||||||||||||| ||||||||||||||||||| ||| |||||||||||| |||||||
Sbjct: 71 gcatcaccatcggccgcctcgtccagaacttcgtgctctcgccgccgcccggccaggaca 130
Query: 1512 aggtngacaccaccgagaagggaggccagttcagtctccacatcttgaagcattccacca 1571
|| | |||||||| |||||||| ||||||||||| ||||||||||||||||| |||||||
Sbjct: 131 agctcgacaccacggagaagggcggccagttcagcctccacatcttgaagcactccacca 190
Query: 1572 tcgtg 1576
|||||
Sbjct: 191 tcgtg 195
>gb|AL502425.1|AL502425 AL502425 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW07I21u 3', mRNA sequence
Length = 554
Score = 248 bits (125), Expect = 5e-064
Identities = 221/253 (87%), Gaps = 1/253 (0%)
Strand = Plus / Minus
Query: 1334 gagcgattcytcgaggaggagaag-cacgtcgaggccaacggcaacgacttcaggtacct 1392
||||| ||| |||||||||||||| | |||||||||| |||||||||||||| ||| | |
Sbjct: 520 gagcgcttcctcgaggaggagaagncccgtcgaggcccacggcaacgacttccggttcgt 461
Query: 1393 gcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctgcccatcctcgg 1452
||| ||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 460 gccnttcggcgtcggccgccggagctgccccgggatcatcctcgcgctgcccatcatcgg 401
Query: 1453 catcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgcccgggcaggacaa 1512
|||||| |||| ||||| || |||||||||||||||||||||||||| |||||||||||
Sbjct: 400 catcacgctcggacgcctggtgcagaacttcgagctgctgccgccgccggggcaggacaa 341
Query: 1513 ggtngacaccaccgagaagggaggccagttcagtctccacatcttgaagcattccaccat 1572
| | ||||||||||||||| ||| |||||||| ||| ||| | ||||| |||||||
Sbjct: 340 gatcgacaccaccgagaagccagggcagttcagcaaccagatcctcaagcacgccaccat 281
Query: 1573 cgtgtgcaagcca 1585
||| |||||||||
Sbjct: 280 cgtctgcaagcca 268
>gb|AJ433404.1|AJ433404 AJ433404 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200022D10F1, mRNA sequence
Length = 363
Score = 240 bits (121), Expect = 1e-061
Identities = 203/230 (88%), Gaps = 1/230 (0%)
Strand = Plus / Plus
Query: 1317 ccgaggagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggca 1376
|||| |||||| |||||||||| ||| |||||||||||||| |||||||||| ||||||
Sbjct: 24 ccgacgagttcaggcccgagcgcttcctcgaggaggagaagtccgtcgaggcccacggca 83
Query: 1377 acgacttcaggtacctgcccttcggcgtc-ggccgcaggagctgccccgggatcatcctc 1435
|||||||| ||| | |||||||||||||| |||||| |||||||||||||||||||||||
Sbjct: 84 acgacttccggttcgtgcccttcggcgtctggccgccggagctgccccgggatcatcctc 143
Query: 1436 gccctgcccatcctcggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccg 1495
|| ||||||||| |||||||||| |||| | ||| || |||||||| ||||||||||||
Sbjct: 144 gcgctgcccatcatcggcatcacgctcggacacctggtgcagaacttagagctgctgccg 203
Query: 1496 ccgcccgggcaggacaaggtngacaccaccgagaagggaggccagttcag 1545
||||| |||||||||||| | ||||||||||||||| ||| ||||||||
Sbjct: 204 ccgccggggcaggacaagatcgacaccaccgagaagccagggcagttcag 253
>gb|AL504109.1|AL504109 AL504109 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW04D19V 5', mRNA sequence
Length = 700
Score = 234 bits (118), Expect = 7e-060
Identities = 151/162 (93%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| |||||||| |||||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 128 ggaggtcctccacacccagggcgtcgagttcggctcccgcacccgcaacgtcgtcttcga 187
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
||||||||| | |||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 188 catcttcaccggcaagggacaggacatggtgttcacggtgtacggcgaccactggcgcaa 247
Query: 463 gatgcgccgcatcatgaccgtgcccttcttcaccaacaaggt 504
|||||| || |||||||| |||||||||||||||||||||||
Sbjct: 248 gatgcggcggatcatgacggtgcccttcttcaccaacaaggt 289
Score = 173 bits (87), Expect = 2e-041
Identities = 162/187 (86%)
Strand = Plus / Plus
Query: 611 ctgcagctcatgatgtacaacaacgtataccggatcatgttcgaccggcgcttcgagagc 670
||||||||||||||||||||| || | | ||| |||||||||||||| || ||||||| |
Sbjct: 396 ctgcagctcatgatgtacaacgacatgttccgcatcatgttcgaccgccggttcgagacc 455
Query: 671 atggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctcgcg 730
||| ||||||||||||| || |||| ||||||||||| |||||||||| |||| |
Sbjct: 456 gtggccgacccgctcttcaaccagctcaaggcgctcaacgccgagcgcagcatcctctcc 515
Query: 731 cagagcttcgagtacaactacggcgacttcatccccatcctccgtccgttcctccgcggc 790
||||||||||| |||||||||||||||||||||||| ||||||| || ||||||||| ||
Sbjct: 516 cagagcttcgactacaactacggcgacttcatccccgtcctccgccccttcctccgccgc 575
Query: 791 tacctca 797
|||||||
Sbjct: 576 tacctca 582
Score = 62.0 bits (31), Expect = 7e-008
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 222 aggtcggcgacgacctcaaccaccgcaacct 252
|||||||||||||||||||||||||||||||
Sbjct: 7 aggtcggcgacgacctcaaccaccgcaacct 37
>gb|AL505149.1|AL505149 AL505149 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW07I21V 5', mRNA sequence
Length = 568
Score = 234 bits (118), Expect = 7e-060
Identities = 151/162 (93%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| |||||||| |||||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 178 ggaggtcctccacacccagggcgtcgagttcggctcccgcacccgcaacgtcgtcttcga 237
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
||||||||| | |||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 238 catcttcaccggcaagggacaggacatggtgttcacggtgtacggcgaccactggcgcaa 297
Query: 463 gatgcgccgcatcatgaccgtgcccttcttcaccaacaaggt 504
|||||| || |||||||| |||||||||||||||||||||||
Sbjct: 298 gatgcggcggatcatgacggtgcccttcttcaccaacaaggt 339
Score = 83.8 bits (42), Expect = 2e-014
Identities = 45/46 (97%)
Strand = Plus / Plus
Query: 207 tcgggaactggctgcaggtcggcgacgacctcaaccaccgcaacct 252
|||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 42 tcggcaactggctgcaggtcggcgacgacctcaaccaccgcaacct 87
Score = 79.8 bits (40), Expect = 3e-013
Identities = 85/100 (85%)
Strand = Plus / Plus
Query: 611 ctgcagctcatgatgtacaacaacgtataccggatcatgttcgaccggcgcttcgagagc 670
||||||||||||||||||||| || | | ||| |||||||||||||| || ||||||| |
Sbjct: 446 ctgcagctcatgatgtacaacgacatgttccgcatcatgttcgaccgccggttcgagacc 505
Query: 671 atggacgacccgctcttcctccgcctcagggcgctcaacg 710
||| ||||||||||||| || |||| |||||||||||
Sbjct: 506 gtggccgacccgctcttcaaccagctcaaggcgctcaacg 545
Score = 44.1 bits (22), Expect = 0.016
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 271 gttcggcgacgtcttcctcctccggatggggcagcgcaacctggtggtggtctc 324
||||||||| || ||||||||||| ||||| |||||||||||||| |||||
Sbjct: 106 gttcggcgaggtgttcctcctccgcatgggcgtccgcaacctggtggtcgtctc 159
>gb|BF620285.2|BF620285 HVSMEc0019F06f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0019F06f, mRNA sequence
Length = 688
Score = 234 bits (118), Expect = 7e-060
Identities = 151/162 (93%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| |||||||| |||||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 324 ggaggtcctccacacccagggcgtcgagttcggctcccgcacccgcaacgtcgtcttcga 383
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
||||||||| | |||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 384 catcttcaccggcaagggacaggacatggtgttcacggtgtacggcgaccactggcgcaa 443
Query: 463 gatgcgccgcatcatgaccgtgcccttcttcaccaacaaggt 504
|||||| || |||||||| |||||||||||||||||||||||
Sbjct: 444 gatgcggcggatcatgacggtgcccttcttcaccaacaaggt 485
Score = 83.8 bits (42), Expect = 2e-014
Identities = 45/46 (97%)
Strand = Plus / Plus
Query: 207 tcgggaactggctgcaggtcggcgacgacctcaaccaccgcaacct 252
|||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 tcggcaactggctgcaggtcggcgacgacctcaaccaccgcaacct 233
Score = 73.9 bits (37), Expect = 2e-011
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 611 ctgcagctcatgatgtacaacaacgtataccggatcatgttcgaccggcgcttcgagagc 670
||||||||||||||||||||| || | | ||| |||||||||||||| || ||||||| |
Sbjct: 592 ctgcagctcatgatgtacaacgacatgttccgcatcatgttcgaccgccggttcgagacc 651
Query: 671 atggacgacccgctctt 687
||| ||||||||||||
Sbjct: 652 gtggccgacccgctctt 668
Score = 44.1 bits (22), Expect = 0.016
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 271 gttcggcgacgtcttcctcctccggatggggcagcgcaacctggtggtggtctc 324
||||||||| || ||||||||||| ||||| |||||||||||||| |||||
Sbjct: 252 gttcggcgaggtgttcctcctccgcatgggcgtccgcaacctggtggtcgtctc 305
>gb|BE216506.2|BE216506 HV_CEb0010K21f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0010K21f, mRNA sequence
Length = 702
Score = 234 bits (118), Expect = 7e-060
Identities = 151/162 (93%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| |||||||| |||||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 328 ggaggtcctccacacccagggcgtcgagttcggctcccgcacccgcaacgtcgtcttcga 387
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
||||||||| | |||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 388 catcttcaccggcaagggacaggacatggtgttcacggtgtacggcgaccactggcgcaa 447
Query: 463 gatgcgccgcatcatgaccgtgcccttcttcaccaacaaggt 504
|||||| || |||||||| |||||||||||||||||||||||
Sbjct: 448 gatgcggcggatcatgacggtgcccttcttcaccaacaaggt 489
Score = 83.8 bits (42), Expect = 2e-014
Identities = 45/46 (97%)
Strand = Plus / Plus
Query: 207 tcgggaactggctgcaggtcggcgacgacctcaaccaccgcaacct 252
|||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 tcggcaactggctgcaggtcggcgacgacctcaaccaccgcaacct 237
Score = 44.1 bits (22), Expect = 0.016
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 271 gttcggcgacgtcttcctcctccggatggggcagcgcaacctggtggtggtctc 324
||||||||| || ||||||||||| ||||| |||||||||||||| |||||
Sbjct: 256 gttcggcgaggtgttcctcctccgcatgggcgtccgcaacctggtggtcgtctc 309
>gb|BI960006.1|BI960006 HVSMEn0022N09f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0022N09f, mRNA sequence
Length = 626
Score = 234 bits (118), Expect = 7e-060
Identities = 151/162 (93%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| |||||||| |||||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 326 ggaggtcctccacacccagggcgtcgagttcggctcccgcacccgcaacgtcgtcttcga 385
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
||||||||| | |||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 386 catcttcaccggcaagggacaggacatggtgttcacggtgtacggcgaccactggcgcaa 445
Query: 463 gatgcgccgcatcatgaccgtgcccttcttcaccaacaaggt 504
|||||| || |||||||| |||||||||||||||||||||||
Sbjct: 446 gatgcggcggatcatgacggtgcccttcttcaccaacaaggt 487
Score = 83.8 bits (42), Expect = 2e-014
Identities = 45/46 (97%)
Strand = Plus / Plus
Query: 207 tcgggaactggctgcaggtcggcgacgacctcaaccaccgcaacct 252
|||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 tcggcaactggctgcaggtcggcgacgacctcaaccaccgcaacct 235
Score = 44.1 bits (22), Expect = 0.016
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 271 gttcggcgacgtcttcctcctccggatggggcagcgcaacctggtggtggtctc 324
||||||||| || ||||||||||| ||||| |||||||||||||| |||||
Sbjct: 254 gttcggcgaggtgttcctcctccgcatgggcgtccgcaacctggtggtcgtctc 307
>gb|BQ471406.1|BQ471406 HV02F12r HV Hordeum vulgare subsp. vulgare cDNA clone HV02F12
5-PRIME, mRNA sequence
Length = 457
Score = 234 bits (118), Expect = 7e-060
Identities = 151/162 (93%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| |||||||| |||||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 290 ggaggtcctccacacccagggcgtcgagttcggctcccgcacccgcaacgtcgtcttcga 349
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
||||||||| | |||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 350 catcttcaccggcaagggacaggacatggtgttcacggtgtacggcgaccactggcgcaa 409
Query: 463 gatgcgccgcatcatgaccgtgcccttcttcaccaacaaggt 504
|||||| || |||||||| |||||||||||||||||||||||
Sbjct: 410 gatgcggcggatcatgacggtgcccttcttcaccaacaaggt 451
Score = 83.8 bits (42), Expect = 2e-014
Identities = 45/46 (97%)
Strand = Plus / Plus
Query: 207 tcgggaactggctgcaggtcggcgacgacctcaaccaccgcaacct 252
|||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 tcggcaactggctgcaggtcggcgacgacctcaaccaccgcaacct 199
Score = 44.1 bits (22), Expect = 0.016
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 271 gttcggcgacgtcttcctcctccggatggggcagcgcaacctggtggtggtctc 324
||||||||| || ||||||||||| ||||| |||||||||||||| |||||
Sbjct: 218 gttcggcgaggtgttcctcctccgcatgggcgtccgcaacctggtggtcgtctc 271
>gb|BI778834.2|BI778834 EBro01_SQ001_L02_R root, 3 week, hydroponic grown, no treatment, cv
Optic, EBro01 Hordeum vulgare subsp. vulgare cDNA clone
EBro01_SQ001_L02 5', mRNA sequence
Length = 537
Score = 234 bits (118), Expect = 7e-060
Identities = 151/162 (93%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| |||||||| |||||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 325 ggaggtcctccacacccagggcgtcgagttcggctcccgcacccgcaacgtcgtcttcga 384
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
||||||||| | |||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 385 catcttcaccggcaagggacaggacatggtgttcacggtgtacggcgaccactggcgcaa 444
Query: 463 gatgcgccgcatcatgaccgtgcccttcttcaccaacaaggt 504
|||||| || |||||||| |||||||||||||||||||||||
Sbjct: 445 gatgcggcggatcatgacggtgcccttcttcaccaacaaggt 486
Score = 83.8 bits (42), Expect = 2e-014
Identities = 45/46 (97%)
Strand = Plus / Plus
Query: 207 tcgggaactggctgcaggtcggcgacgacctcaaccaccgcaacct 252
|||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 tcggcaactggctgcaggtcggcgacgacctcaaccaccgcaacct 234
Score = 44.1 bits (22), Expect = 0.016
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 271 gttcggcgacgtcttcctcctccggatggggcagcgcaacctggtggtggtctc 324
||||||||| || ||||||||||| ||||| |||||||||||||| |||||
Sbjct: 253 gttcggcgaggtgttcctcctccgcatgggcgtccgcaacctggtggtcgtctc 306
>gb|AJ463481.1|AJ463481 AJ463481 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200025H07F1, mRNA sequence
Length = 240
Score = 232 bits (117), Expect = 3e-059
Identities = 195/222 (87%)
Strand = Plus / Plus
Query: 1237 cggntacgacatccccgccgagagcaagatcctcgtcaacgcctggtacctcgccaacaa 1296
||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||| |
Sbjct: 2 cggttacgacatccccgccgaatccaagatcctcgtcaacgcctggttcctcgccaacga 61
Query: 1297 ccccgacagytggaggcggcccgaggagttccggcccgagcgattcytcgaggaggagaa 1356
|||| | | ||| ||| |||| |||||| |||||||||| ||| |||||||||||||
Sbjct: 62 ccccaagcggtgggtgcgcgccgacgagttcaggcccgagcgcttcctcgaggaggagaa 121
Query: 1357 gcacgtcgaggccaacggcaacgacttcaggtacctgcccttcggcgtcggccgcaggag 1416
| |||||||||| |||||||||||||| ||| | |||||||||||||||||||| ||||
Sbjct: 122 gtccgtcgaggcccacggcaacgacttccggttcgtgcccttcggcgtcggccgccggag 181
Query: 1417 ctgccccgggatcatcctcgccctgcccatcctcggcatcac 1458
||||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 182 ctgccccgggatcatcctcgcgctgcccatcatcggcatcac 223
>gb|BJ465823.1|BJ465823 BJ465823 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags27h18 3', mRNA sequence
Length = 426
Score = 232 bits (117), Expect = 3e-059
Identities = 197/224 (87%)
Strand = Plus / Minus
Query: 1362 tcgaggccaacggcaacgacttcaggtacctgcccttcggcgtcggccgcaggagctgcc 1421
|||||||| |||||||||||||| ||| | |||||||||||||||||||| |||||||||
Sbjct: 426 tcgaggcccacggcaacgacttccggttcgtgcccttcggcgtcggccgccggagctgcc 367
Query: 1422 ccgggatcatcctcgccctgcccatcctcggcatcaccatcggtcgcctcgtccagaact 1481
|||||||||||||||| ||||||||| |||||||||| |||| ||||| || |||||||
Sbjct: 366 ccgggatcatcctcgcgctgcccatcatcggcatcacgctcggacgcctggtgcagaact 307
Query: 1482 tcgagctgctgccgccgcccgggcaggacaaggtngacaccaccgagaagggaggccagt 1541
||||||||||||||||||| |||||||||||| | ||||||||||||||| ||| ||||
Sbjct: 306 tcgagctgctgccgccgccggggcaggacaagatcgacaccaccgagaagccagggcagt 247
Query: 1542 tcagtctccacatcttgaagcattccaccatcgtgtgcaagcca 1585
|||| ||| ||| | ||||| |||||||||| |||||||||
Sbjct: 246 tcagcaaccagatcctcaagcacgccaccatcgtctgcaagcca 203
>gb|BM817083.1|BM817083 HC01F04_T3.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC01F04_T3.ab1 similar to Steroid
17-alpha-monooxygenase,Unspecific monooxygenase, mRNA
sequence
Length = 786
Score = 226 bits (114), Expect = 2e-057
Identities = 339/401 (84%), Gaps = 11/401 (2%)
Strand = Plus / Plus
Query: 1138 cctcccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgct 1197
|||||||||||||||| | || | ||||||||||| || || || ||||||||||||||
Sbjct: 158 cctcccctacctgcagtccgtcgtgaaggagacgctccgcctccgcatggccatcccgct 217
Query: 1198 gctggtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccga 1257
||||||||||||||||||||| ||| |||||||||| ||| |||||||||||||||||
Sbjct: 218 cctggtgccgcacatgaacctcagcgatgccaagctcgccggttacgacatccccgccga 277
Query: 1258 gagcaagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcc 1317
||||||||||||||||||||||| |||||||||| ||||| | | ||| ||| |
Sbjct: 278 atccaagatcctcgtcaacgcctggttcctcgccaacgaccccaagcggtgggtgcgcgc 337
Query: 1318 cgaggagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaa 1377
||| |||||| |||||||||| ||| |||||||||||||| |||||||||| |||||||
Sbjct: 338 cgacgagttcaggcccgagcgcttcctcgaggaggagaagtccgtcgaggcccacggcaa 397
Query: 1378 c-gacttcaggtacctgccc-ttcggc-gtcggcc-gcaggagctg-ccccgggatca-t 1431
| |||||| ||| | ||||| |||||| ||||||| || ||||||| ||||||||||| |
Sbjct: 398 cngacttccggttcgtgccctttcggcggtcggccggcgggagctgcccccgggatcatt 457
Query: 1432 cctcgc-cctgcccatcctc-ggcatcac-catcggtc-gcctcgtccagaact-tcgag 1486
|||||| ||||||||| || |||||||| | |||| | |||| || || |||| || ||
Sbjct: 458 cctcgcggctgcccatcatcnggcatcacgcctcggacagcctggtgcaaaactntcnag 517
Query: 1487 ctgctgccgccgcccgggcaggacaaggtngacaccaccga 1527
|||||||||||| | |||||||||||| | |||||||||||
Sbjct: 518 ctgctgccgccggcggggcaggacaagatcgacaccaccga 558
Score = 119 bits (60), Expect = 3e-025
Identities = 87/96 (90%)
Strand = Plus / Plus
Query: 982 gaacattaacgttgcagcgatcgagaccacgctgtggtcgatcgagtgggcggtcgctga 1041
|||||| ||||| ||||| || ||||| |||||||||||||||||||||| |||| ||
Sbjct: 2 gaacatcaacgtcgcagccattgagacgacgctgtggtcgatcgagtggggcctcgcgga 61
Query: 1042 gctggtgaaccacccggagatccagcagaagctgcg 1077
||||||||||||||||||||||||||||||||||||
Sbjct: 62 gctggtgaaccacccggagatccagcagaagctgcg 97
>gb|AL501446.1|AL501446 AL501446 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW04D19u 3', mRNA sequence
Length = 451
Score = 202 bits (102), Expect = 3e-050
Identities = 182/208 (87%), Gaps = 1/208 (0%)
Strand = Plus / Minus
Query: 1379 gacttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgcc 1438
|||||| ||| | ||||||||||||||| |||| |||||||||||||||||||||||||
Sbjct: 443 gacttccggttcgtgcccttcggcgtcgnccgccggagctgccccgggatcatcctcgcg 384
Query: 1439 ctgcccatcctcggcatcac-catcggtcgcctcgtccagaacttcgagctgctgccgcc 1497
||||||||| |||||||||| |||||| ||||| || |||||||||||||||||||||||
Sbjct: 383 ctgcccatcatcggcatcacgcatcggacgcctggtgcagaacttcgagctgctgccgcc 324
Query: 1498 gcccgggcaggacaaggtngacaccaccgagaagggaggccagttcagtctccacatctt 1557
||| |||||||||||| | ||||||||||||||| ||| |||||||| ||| ||| |
Sbjct: 323 gccggggcaggacaagatcgacaccaccgagaagccagggcagttcagcaaccagatcct 264
Query: 1558 gaagcattccaccatcgtgtgcaagcca 1585
||||| |||||||||| |||||||||
Sbjct: 263 caagcacgccaccatcgtctgcaagcca 236
>gb|BG308974.1|BG308974 HVSMEc0001C17f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0001C17f, mRNA sequence
Length = 780
Score = 194 bits (98), Expect = 6e-048
Identities = 146/162 (90%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| |||||||| || ||||| ||||||||||| |||||||| ||||| ||||||||
Sbjct: 283 ggaggtcctccacacccaaggcgtcgagttcggctctcgcacccgtaacgtcgtcttcga 342
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
||||||||| | ||| || ||||||||||||||||| || ||||||||||||||||||||
Sbjct: 343 catcttcaccggcaaaggccaggacatggtgttcactgtctacggcgaccactggcgcaa 402
Query: 463 gatgcgccgcatcatgaccgtgcccttcttcaccaacaaggt 504
|||||| || |||||||| |||||||||||||||||||||||
Sbjct: 403 gatgcggcgtatcatgacggtgcccttcttcaccaacaaggt 444
Score = 117 bits (59), Expect = 1e-024
Identities = 149/179 (83%)
Strand = Plus / Plus
Query: 611 ctgcagctcatgatgtacaacaacgtataccggatcatgttcgaccggcgcttcgagagc 670
||||||||||||||||||||| || | | ||| |||||||||||||| || |||||||||
Sbjct: 548 ctgcagctcatgatgtacaacgacatgttccgcatcatgttcgaccgccggttcgagagc 607
Query: 671 atggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctcgcg 730
| | ||||||||||||| | |||||||| ||||||| |||||||||| ||| |
Sbjct: 608 ctcgccgacccgctcttcaacaagctcagggctctcaacgccgagcgcagcattctctcc 667
Query: 731 cagagcttcgagtacaactacggcgacttcatccccatcctccgtccgttcctccgcgg 789
|| ||||| || |||||||||||||||||||| ||||| || || || |||||||||||
Sbjct: 668 catagcttagactacaactacggcgacttcatgcccatgcttcggcccttcctccgcgg 726
Score = 46.1 bits (23), Expect = 0.004
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 207 tcgggaactggctgcaggtcggcgacgacctcaaccaccgcaacctc 253
|||| |||||||| |||| ||||| |||||||| ||||||||||||
Sbjct: 147 tcggcaactggctccaggggggcgatgacctcaatcaccgcaacctc 193
>gb|BQ762245.1|BQ762245 EBro01_SQ005_B10_R root, 3 week, hydroponic grown, no treatment, cv
Optic, EBro01 Hordeum vulgare subsp. vulgare cDNA clone
EBro01_SQ005_B10 5', mRNA sequence
Length = 537
Score = 190 bits (96), Expect = 1e-046
Identities = 212/252 (84%)
Strand = Plus / Plus
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||||||||||||||||| |||||||||| ||||| | | ||| ||| ||||
Sbjct: 1 aagatcctcgtcaacgcctggttcctcgccaacgaccccaagcgctgggtgcgcgccgac 60
Query: 1322 gagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgac 1381
||||||||||| ||||| ||| |||| ||||||| | |||||||||||| ||||| |||
Sbjct: 61 gagttccggccggagcggttcctcgaagaggagagggccgtcgaggccaatggcaatgac 120
Query: 1382 ttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctg 1441
||| ||| |||||||||||||||| || ||||||||||| || ||||||||||| |||
Sbjct: 121 ttccggtttgtgcccttcggcgtcggtcggaggagctgcccgggaatcatcctcgctctg 180
Query: 1442 cccatcctcggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgccc 1501
|||||| |||||||||| |||| ||||| || ||||||||| |||| ||||||||||
Sbjct: 181 cccatcatcggcatcacgctcggccgccttgtgcagaacttccagctactgccgccgctg 240
Query: 1502 gggcaggacaag 1513
||| ||||||||
Sbjct: 241 gggaaggacaag 252
>gb|BQ767330.1|BQ767330 EBro08_SQ008_H18_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ008_H18 5', mRNA sequence
Length = 457
Score = 181 bits (91), Expect = 1e-043
Identities = 196/232 (84%)
Strand = Plus / Plus
Query: 1138 cctcccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgct 1197
|||||||||||||||| | || | ||||||||||| || || || ||||||||||||||
Sbjct: 223 cctcccctacctgcagtccgtcgtgaaggagacgctccgcctccgcatggccatcccgct 282
Query: 1198 gctggtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccga 1257
||||||||||||||||||||| ||| |||||||||| ||| |||||||||||||||||
Sbjct: 283 cctggtgccgcacatgaacctcagcgatgccaagctcgccggttacgacatccccgccga 342
Query: 1258 gagcaagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcc 1317
||||||||||||||||||||||| |||||||||| ||||| | | ||| ||| |
Sbjct: 343 atccaagatcctcgtcaacgcctggttcctcgccaacgaccccaagcggtgggtgcgcgc 402
Query: 1318 cgaggagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggcc 1369
||| |||||| ||||||| | ||| |||||||||||||| ||||||||||
Sbjct: 403 cgacgagttcaagcccgagtgcttcctcgaggaggagaagtccgtcgaggcc 454
Score = 113 bits (57), Expect = 2e-023
Identities = 87/97 (89%)
Strand = Plus / Plus
Query: 981 agaacattaacgttgcagcgatcgagaccacgctgtggtcgatcgagtgggcggtcgctg 1040
||||||| ||||| ||| | || ||||| |||||||||||||||||||||| |||| |
Sbjct: 66 agaacatcaacgtcgcacccattgagacgacgctgtggtcgatcgagtggggcctcgcgg 125
Query: 1041 agctggtgaaccacccggagatccagcagaagctgcg 1077
|||||||||||||||||||||||||||||||||||||
Sbjct: 126 agctggtgaaccacccggagatccagcagaagctgcg 162
>gb|BF257476.2|BF257476 HVSMEf0013A08f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0013A08f, mRNA sequence
Length = 493
Score = 173 bits (87), Expect = 2e-041
Identities = 162/187 (86%)
Strand = Plus / Plus
Query: 611 ctgcagctcatgatgtacaacaacgtataccggatcatgttcgaccggcgcttcgagagc 670
||||||||||||||||||||| || | | ||| |||||||||||||| || ||||||| |
Sbjct: 122 ctgcagctcatgatgtacaacgacatgttccgcatcatgttcgaccgccggttcgagacc 181
Query: 671 atggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctcgcg 730
||| ||||||||||||| || |||| ||||||||||| |||||||||| |||| |
Sbjct: 182 gtggccgacccgctcttcaaccagctcaaggcgctcaacgccgagcgcagcatcctctcc 241
Query: 731 cagagcttcgagtacaactacggcgacttcatccccatcctccgtccgttcctccgcggc 790
||||||||||| |||||||||||||||||||||||| ||||||| || ||||||||| ||
Sbjct: 242 cagagcttcgactacaactacggcgacttcatccccgtcctccgccccttcctccgccgc 301
Query: 791 tacctca 797
|||||||
Sbjct: 302 tacctca 308
Score = 81.8 bits (41), Expect = 7e-014
Identities = 41/41 (100%)
Strand = Plus / Plus
Query: 212 aactggctgcaggtcggcgacgacctcaaccaccgcaacct 252
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 aactggctgcaggtcggcgacgacctcaaccaccgcaacct 45
Score = 62.0 bits (31), Expect = 7e-008
Identities = 76/91 (83%)
Strand = Plus / Plus
Query: 903 tcaagtgcgccattgatcacatactggaggcacagcagaagggtgagatcaacgaggaca 962
||||||||||||| || ||||| ||||| || | |||||| ||||||||| | ||||
Sbjct: 402 tcaagtgcgccatggaccacatcctggaagccgaaaggaagggcgagatcaaccacgaca 461
Query: 963 acgtgctcttcatcgtcgagaacattaacgt 993
|||| |||| ||||||||||||||| |||||
Sbjct: 462 acgtcctctacatcgtcgagaacatcaacgt 492
Score = 42.2 bits (21), Expect = 0.061
Identities = 42/49 (85%)
Strand = Plus / Plus
Query: 271 gttcggcgacgtcttcctcctccggatggggcagcgcaacctggtggtg 319
||||||||| || ||||||||||| ||||| |||||||||||||||
Sbjct: 64 gttcggcgaggtgttcctcctccgcatgggcgtccgcaacctggtggtg 112
>gb|BF257700.2|BF257700 HVSMEf0013K04f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0013K04f, mRNA sequence
Length = 493
Score = 173 bits (87), Expect = 2e-041
Identities = 162/187 (86%)
Strand = Plus / Plus
Query: 611 ctgcagctcatgatgtacaacaacgtataccggatcatgttcgaccggcgcttcgagagc 670
||||||||||||||||||||| || | | ||| |||||||||||||| || ||||||| |
Sbjct: 185 ctgcagctcatgatgtacaacgacatgttccgcatcatgttcgaccgccggttcgagacc 244
Query: 671 atggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctcgcg 730
||| ||||||||||||| || |||| ||||||||||| |||||||||| |||| |
Sbjct: 245 gtggccgacccgctcttcaaccagctcaaggcgctcaacgccgagcgcagcatcctctcc 304
Query: 731 cagagcttcgagtacaactacggcgacttcatccccatcctccgtccgttcctccgcggc 790
||||||||||| |||||||||||||||||||||||| ||||||| || ||||||||| ||
Sbjct: 305 cagagcttcgactacaactacggcgacttcatccccgtcctccgccccttcctccgccgc 364
Query: 791 tacctca 797
|||||||
Sbjct: 365 tacctca 371
Score = 83.8 bits (42), Expect = 2e-014
Identities = 45/46 (97%)
Strand = Plus / Plus
Query: 207 tcgggaactggctgcaggtcggcgacgacctcaaccaccgcaacct 252
|||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 6 tcggcaactggctgcaggtcggcgacgacctcaaccaccgcaacct 51
Score = 44.1 bits (22), Expect = 0.016
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 271 gttcggcgacgtcttcctcctccggatggggcagcgcaacctggtggtggtctc 324
||||||||| || ||||||||||| ||||| |||||||||||||| |||||
Sbjct: 70 gttcggcgaggtgttcctcctccgcatgggcgtccgcaacctggtggtcgtctc 123
>gb|BG367496.1|BG367496 HVSMEi0012H14f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0012H14f, mRNA sequence
Length = 713
Score = 173 bits (87), Expect = 2e-041
Identities = 162/187 (86%)
Strand = Plus / Plus
Query: 611 ctgcagctcatgatgtacaacaacgtataccggatcatgttcgaccggcgcttcgagagc 670
||||||||||||||||||||| || | | ||| |||||||||||||| || ||||||| |
Sbjct: 153 ctgcagctcatgatgtacaacgacatgttccgcatcatgttcgaccgccggttcgagacc 212
Query: 671 atggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctcgcg 730
||| ||||||||||||| || |||| ||||||||||| |||||||||| |||| |
Sbjct: 213 gtggccgacccgctcttcaaccagctcaaggcgctcaacgccgagcgcagcatcctctcc 272
Query: 731 cagagcttcgagtacaactacggcgacttcatccccatcctccgtccgttcctccgcggc 790
||||||||||| |||||||||||||||||||||||| ||||||| || ||||||||| ||
Sbjct: 273 cagagcttcgactacaactacggcgacttcatccccgtcctccgccccttcctccgccgc 332
Query: 791 tacctca 797
|||||||
Sbjct: 333 tacctca 339
Score = 125 bits (63), Expect = 5e-027
Identities = 138/163 (84%)
Strand = Plus / Plus
Query: 903 tcaagtgcgccattgatcacatactggaggcacagcagaagggtgagatcaacgaggaca 962
||||||||||||| || ||||| ||||| || | |||||| ||||||||| | ||||
Sbjct: 433 tcaagtgcgccatggaccacatcctggaagccgaaaggaagggcgagatcaaccacgaca 492
Query: 963 acgtgctcttcatcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcga 1022
|||| |||| ||||||||||||||| ||||| ||| | || ||||| |||||||||||||
Sbjct: 493 acgtcctctacatcgtcgagaacatcaacgtcgcaaccattgagacgacgctgtggtcga 552
Query: 1023 tcgagtgggcggtcgctgagctggtgaaccacccggagatcca 1065
||||||||| ||| ||||||||||||||||||||||||||
Sbjct: 553 tcgagtggggccccgcggagctggtgaaccacccggagatcca 595
Score = 67.9 bits (34), Expect = 1e-009
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 459 gcaagatgcgccgcatcatgaccgtgcccttcttcaccaacaaggt 504
|||||||||| || |||||||| |||||||||||||||||||||||
Sbjct: 1 gcaagatgcggcggatcatgacggtgcccttcttcaccaacaaggt 46
>gb|AV917422.1|AV917422 AV917422 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags18n15 5', mRNA sequence
Length = 619
Score = 173 bits (87), Expect = 2e-041
Identities = 162/187 (86%)
Strand = Plus / Plus
Query: 611 ctgcagctcatgatgtacaacaacgtataccggatcatgttcgaccggcgcttcgagagc 670
||||||||||||||||||||| || | | ||| |||||||||||||| || ||||||| |
Sbjct: 113 ctgcagctcatgatgtacaacgacatgttccgcatcatgttcgaccgccggttcgagacc 172
Query: 671 atggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctcgcg 730
||| ||||||||||||| || |||| ||||||||||| |||||||||| |||| |
Sbjct: 173 gtggccgacccgctcttcaaccagctcaaggcgctcaacgccgagcgcagcatcctctcc 232
Query: 731 cagagcttcgagtacaactacggcgacttcatccccatcctccgtccgttcctccgcggc 790
||||||||||| |||||||||||||||||||||||| ||||||| || ||||||||| ||
Sbjct: 233 cagagcttcgactacaactacggcgacttcatccccgtcctccgccccttcctccgccgc 292
Query: 791 tacctca 797
|||||||
Sbjct: 293 tacctca 299
Score = 165 bits (83), Expect = 6e-039
Identities = 152/175 (86%)
Strand = Plus / Plus
Query: 903 tcaagtgcgccattgatcacatactggaggcacagcagaagggtgagatcaacgaggaca 962
||||||||||||| || ||||| ||||| || | |||||| ||||||||| | ||||
Sbjct: 393 tcaagtgcgccatggaccacatcctggaagccgaaaggaagggcgagatcaaccacgaca 452
Query: 963 acgtgctcttcatcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcga 1022
|||| |||| ||||||||||||||| ||||| ||||| || ||||| |||||||||||||
Sbjct: 453 acgtcctctacatcgtcgagaacatcaacgtcgcagccattgagacgacgctgtggtcga 512
Query: 1023 tcgagtgggcggtcgctgagctggtgaaccacccggagatccagcagaagctgcg 1077
||||||||| |||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 513 tcgagtggggcctcgcggagctggtgaaccacccggagatccagcagaagctgcg 567
>gb|BF261377.2|BF261377 HV_CEa0001C01f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0001C01f, mRNA sequence
Length = 839
Score = 171 bits (86), Expect = 9e-041
Identities = 143/162 (88%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| |||||||| |||||||| ||||| ||||||||||||||||||| ||||||||
Sbjct: 330 ggaggtcctccacacccagggcgtctagttctgctcccgcacccgcaacgtcgtcttcga 389
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
||||||||| |||||| || |||||||||||||| ||||||| ||||||||||||||
Sbjct: 390 catcttcacccgcaagggacatgacatggtgttcacggtgtacgaggaccactggcgcaa 449
Query: 463 gatgcgccgcatcatgaccgtgcccttcttcaccaacaaggt 504
||||| | ||||||||||||| ||||||||||||||||||
Sbjct: 450 gatgccggggatcatgaccgtgcgcttcttcaccaacaaggt 491
Score = 75.9 bits (38), Expect = 4e-012
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 207 tcgggaactggctgcaggtcggcgacgacctcaaccaccgca 248
|||| |||||||||||||||||||||||||||||||||||||
Sbjct: 194 tcggcaactggctgcaggtcggcgacgacctcaaccaccgca 235
>gb|AL504527.1|AL504527 AL504527 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW05I23V 5', mRNA sequence
Length = 667
Score = 167 bits (84), Expect = 1e-039
Identities = 161/187 (86%)
Strand = Plus / Plus
Query: 611 ctgcagctcatgatgtacaacaacgtataccggatcatgttcgaccggcgcttcgagagc 670
|||||| |||||||||||||| || | | ||| |||||||||||||| || ||||||| |
Sbjct: 35 ctgcagntcatgatgtacaacgacatgttccgcatcatgttcgaccgccggttcgagacc 94
Query: 671 atggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctcgcg 730
||| ||||||||||||| || |||| ||||||||||| |||||||||| |||| |
Sbjct: 95 gtggccgacccgctcttcaaccagctcaaggcgctcaacgccgagcgcagcatcctctcc 154
Query: 731 cagagcttcgagtacaactacggcgacttcatccccatcctccgtccgttcctccgcggc 790
||||||||||| |||||||||||||||||||||||| ||||||| || ||||||||| ||
Sbjct: 155 cagagcttcgactacaactacggcgacttcatccccgtcctccgccccttcctccgccgc 214
Query: 791 tacctca 797
|||||||
Sbjct: 215 tacctca 221
Score = 165 bits (83), Expect = 6e-039
Identities = 152/175 (86%)
Strand = Plus / Plus
Query: 903 tcaagtgcgccattgatcacatactggaggcacagcagaagggtgagatcaacgaggaca 962
||||||||||||| || ||||| ||||| || | |||||| ||||||||| | ||||
Sbjct: 315 tcaagtgcgccatggaccacatcctggaagccgaaaggaagggcgagatcaaccacgaca 374
Query: 963 acgtgctcttcatcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcga 1022
|||| |||| ||||||||||||||| ||||| ||||| || ||||| |||||||||||||
Sbjct: 375 acgtcctctacatcgtcgagaacatcaacgtcgcagccattgagacgacgctgtggtcga 434
Query: 1023 tcgagtgggcggtcgctgagctggtgaaccacccggagatccagcagaagctgcg 1077
||||||||| |||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 435 tcgagtggggcctcgcggagctggtgaaccacccggagatccagcagaagctgcg 489
Score = 40.2 bits (20), Expect = 0.24
Identities = 67/80 (83%), Gaps = 2/80 (2%)
Strand = Plus / Plus
Query: 1138 cctcccctacctgcaggcggtgatcaaggagacgctgcggct-gcggatggccatcccgc 1196
|||||||||||||||| | || | ||||||||||| || || || |||||||||||||
Sbjct: 550 cctcccctacctgcagtccgtcgtgaaggagacgctccgcctcccgcatggccatcccgc 609
Query: 1197 -tgctggtgccgcacatgaa 1215
| |||| ||||||||||||
Sbjct: 610 ttcctggggccgcacatgaa 629
>gb|BI959752.1|BI959752 HVSMEn0021E03f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0021E03f, mRNA sequence
Length = 691
Score = 167 bits (84), Expect = 1e-039
Identities = 145/163 (88%), Gaps = 2/163 (1%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| |||||||| |||||||| |||||| ||||||||||||||||||| ||||||||
Sbjct: 332 ggaggtcctccacacccagggcgtcgagttcngctcccgcacccgcaacgtcgtcttcga 391
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||| || | |||||| ||||||||||||||||| | ||||||| ||||||| |||||
Sbjct: 392 catcttgaccggcaagggacaggacatggtgttcacggggtacggcaaccactgacgcaa 451
Query: 463 gatg-cgccgcatcatgacc-gtgcccttcttcaccaacaagg 503
|||| ||||| ||||||||| | |||| |||||||||||||||
Sbjct: 452 gatgccgccggatcatgaccggggcccatcttcaccaacaagg 494
Score = 83.8 bits (42), Expect = 2e-014
Identities = 45/46 (97%)
Strand = Plus / Plus
Query: 207 tcgggaactggctgcaggtcggcgacgacctcaaccaccgcaacct 252
|||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 tcggcaactggctgcaggtcggcgacgacctcaaccaccgcaacct 241
Score = 36.2 bits (18), Expect = 3.8
Identities = 45/54 (83%)
Strand = Plus / Plus
Query: 271 gttcggcgacgtcttcctcctccggatggggcagcgcaacctggtggtggtctc 324
||||||||| | ||||||||||| ||||| |||||||||||||| |||||
Sbjct: 260 gttcggcgaggggttcctcctccgcatgggcgtccgcaacctggtggtcgtctc 313
>gb|BQ664209.1|BQ664209 HV02F12u HV Hordeum vulgare subsp. vulgare cDNA clone HV02F12
3-PRIME, mRNA sequence
Length = 643
Score = 167 bits (84), Expect = 1e-039
Identities = 143/163 (87%)
Strand = Plus / Minus
Query: 1138 cctcccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgct 1197
|||||||||||||||| | || | ||||||||||| || || || ||||||||||||||
Sbjct: 208 cctcccctacctgcagtccgtcgtgaaggagacgctccgcctccgcatggccatcccgct 149
Query: 1198 gctggtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccga 1257
||||||||||||||||||||| ||| |||||||||| ||| |||||||||||||||||
Sbjct: 148 cctggtgccgcacatgaacctcagcgatgccaagctcgccggttacgacatccccgccga 89
Query: 1258 gagcaagatcctcgtcaacgcctggtacctcgccaacaacccc 1300
||||||||||||||||||||||| |||||||||| |||||
Sbjct: 88 atccaagatcctcgtcaacgcctggttcctcgccaacgacccc 46
Score = 165 bits (83), Expect = 6e-039
Identities = 152/175 (86%)
Strand = Plus / Minus
Query: 903 tcaagtgcgccattgatcacatactggaggcacagcagaagggtgagatcaacgaggaca 962
||||||||||||| || ||||| ||||| || | |||||| ||||||||| | ||||
Sbjct: 443 tcaagtgcgccatggaccacatcctggaagccgaaaggaagggcgagatcaaccacgaca 384
Query: 963 acgtgctcttcatcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcga 1022
|||| |||| ||||||||||||||| ||||| ||||| || ||||| |||||||||||||
Sbjct: 383 acgtcctctacatcgtcgagaacatcaacgtcgcagccattgagacgacgctgtggtcga 324
Query: 1023 tcgagtgggcggtcgctgagctggtgaaccacccggagatccagcagaagctgcg 1077
||||||||| |||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 323 tcgagtggggcctcgcggagctggtgaaccacccggagatccagcagaagctgcg 269
Score = 111 bits (56), Expect = 8e-023
Identities = 91/103 (88%)
Strand = Plus / Minus
Query: 695 ctcagggcgctcaacggcgagcgcagccgcctcgcgcagagcttcgagtacaactacggc 754
|||| ||||||||||| |||||||||| |||| | ||||||||||| ||||||||||||
Sbjct: 639 ctcaaggcgctcaacgccgagcgcagcatcctctcccagagcttcgactacaactacggc 580
Query: 755 gacttcatccccatcctccgtccgttcctccgcggctacctca 797
|||||||||||| ||||||| || ||||||||| | |||||||
Sbjct: 579 gacttcatccccgtcctccgccccttcctccgccgntacctca 537
>gb|AL504406.1|AL504406 AL504406 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW05D01V 5', mRNA sequence
Length = 689
Score = 165 bits (83), Expect = 6e-039
Identities = 152/175 (86%)
Strand = Plus / Plus
Query: 903 tcaagtgcgccattgatcacatactggaggcacagcagaagggtgagatcaacgaggaca 962
||||||||||||| || ||||| ||||| || | |||||| ||||||||| | ||||
Sbjct: 297 tcaagtgcgccatggaccacatcctggaagccgaaaggaagggcgagatcaaccacgaca 356
Query: 963 acgtgctcttcatcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcga 1022
|||| |||| ||||||||||||||| ||||| ||||| || ||||| |||||||||||||
Sbjct: 357 acgtcctctacatcgtcgagaacatcaacgtcgcagccattgagacgacgctgtggtcga 416
Query: 1023 tcgagtgggcggtcgctgagctggtgaaccacccggagatccagcagaagctgcg 1077
||||||||| |||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 417 tcgagtggggcctcgcggagctggtgaaccacccggagatccagcagaagctgcg 471
Score = 159 bits (80), Expect = 4e-037
Identities = 160/187 (85%)
Strand = Plus / Plus
Query: 611 ctgcagctcatgatgtacaacaacgtataccggatcatgttcgaccggcgcttcgagagc 670
|||||| || ||||||||||| || | | ||| |||||||||||||| || ||||||| |
Sbjct: 17 ctgcagttcntgatgtacaacgacatgttccgcatcatgttcgaccgccggttcgagacc 76
Query: 671 atggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctcgcg 730
||| ||||||||||||| || |||| ||||||||||| |||||||||| |||| |
Sbjct: 77 gtggccgacccgctcttcaaccagctcaaggcgctcaacgccgagcgcagcatcctctcc 136
Query: 731 cagagcttcgagtacaactacggcgacttcatccccatcctccgtccgttcctccgcggc 790
||||||||||| |||||||||||||||||||||||| ||||||| || ||||||||| ||
Sbjct: 137 cagagcttcgactacaactacggcgacttcatccccgtcctccgccccttcctccgccgc 196
Query: 791 tacctca 797
|||||||
Sbjct: 197 tacctca 203
Score = 105 bits (53), Expect = 5e-021
Identities = 133/158 (84%), Gaps = 2/158 (1%)
Strand = Plus / Plus
Query: 1138 cctcccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgct 1197
|||||||||||||||| | || | |||||||| || || || || ||||||||||||||
Sbjct: 532 cctcccctacctgcagtccgtcgtgaaggagacnctccgcctccgcatggccatcccgct 591
Query: 1198 gctggtgccgcacatgaacctccacgacgccaagctcggcgg-ntacgacatccccg-cc 1255
||||||||||||||||||||| ||| |||||||||| ||| |||||||||| || ||
Sbjct: 592 cctggtgccgcacatgaacctcagcgatgccaagctcgccggtttacgacatccncgccc 651
Query: 1256 gagagcaagatcctcgtcaacgcctggtacctcgccaa 1293
|| ||||||||| ||||||||||||| ||||||||
Sbjct: 652 gaatccaagatccttgtcaacgcctggtttctcgccaa 689
>gb|BF258169.3|BF258169 HVSMEf0014P23f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0014P23f, mRNA sequence
Length = 574
Score = 165 bits (83), Expect = 6e-039
Identities = 152/175 (86%)
Strand = Plus / Plus
Query: 903 tcaagtgcgccattgatcacatactggaggcacagcagaagggtgagatcaacgaggaca 962
||||||||||||| || ||||| ||||| || | |||||| ||||||||| | ||||
Sbjct: 289 tcaagtgcgccatggaccacatcctggaagccgaaaggaagggcgagatcaaccacgaca 348
Query: 963 acgtgctcttcatcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcga 1022
|||| |||| ||||||||||||||| ||||| ||||| || ||||| |||||||||||||
Sbjct: 349 acgtcctctacatcgtcgagaacatcaacgtcgcagccattgagacgacgctgtggtcga 408
Query: 1023 tcgagtgggcggtcgctgagctggtgaaccacccggagatccagcagaagctgcg 1077
||||||||| |||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 409 tcgagtggggcctcgcggagctggtgaaccacccggagatccagcagaagctgcg 463
Score = 125 bits (63), Expect = 5e-027
Identities = 156/187 (83%)
Strand = Plus / Plus
Query: 611 ctgcagctcatgatgtacaacaacgtataccggatcatgttcgaccggcgcttcgagagc 670
||||||||||||||||||||| || | | || |||||||| ||||| || || ||| |
Sbjct: 9 ctgcagctcatgatgtacaacgacatgtgccacatcatgttggaccgccggatctagacc 68
Query: 671 atggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctcgcg 730
|| ||||||||||| | || |||||||||||||||| |||||||||| |||| |
Sbjct: 69 gcggccgacccgctctacagccagctcagggcgctcaacgccgagcgcagcatcctctcc 128
Query: 731 cagagcttcgagtacaactacggcgacttcatccccatcctccgtccgttcctccgcggc 790
||||||||||| ||||||||||||||||| |||||| ||||||| || ||||||||| ||
Sbjct: 129 cagagcttcgactacaactacggcgacttgatccccgtcctccgccccttcctccgccgc 188
Query: 791 tacctca 797
|||||||
Sbjct: 189 tacctca 195
>gb|BF260290.3|BF260290 HVSMEf0021J18f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0021J18f, mRNA sequence
Length = 834
Score = 165 bits (83), Expect = 6e-039
Identities = 152/175 (86%)
Strand = Plus / Plus
Query: 903 tcaagtgcgccattgatcacatactggaggcacagcagaagggtgagatcaacgaggaca 962
||||||||||||| || ||||| ||||| || | |||||| ||||||||| | ||||
Sbjct: 164 tcaagtgcgccatggaccacatcctggaagccgaaaggaagggcgagatcaaccacgaca 223
Query: 963 acgtgctcttcatcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcga 1022
|||| |||| ||||||||||||||| ||||| ||||| || ||||| |||||||||||||
Sbjct: 224 acgtcctctacatcgtcgagaacatcaacgtcgcagccattgagacgacgctgtggtcga 283
Query: 1023 tcgagtgggcggtcgctgagctggtgaaccacccggagatccagcagaagctgcg 1077
||||||||| |||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 284 tcgagtggggcctcgcggagctggtgaaccacccggagatccagcagaagctgcg 338
Score = 135 bits (68), Expect = 5e-030
Identities = 139/163 (85%)
Strand = Plus / Plus
Query: 1138 cctcccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgct 1197
|||||||||||||||| | || | ||||||||||| || || || ||||||||||||||
Sbjct: 399 cctcccctacctgcagtccgtcgtgaaggagacgctccgcctccgcatggccatcccgct 458
Query: 1198 gctggtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccga 1257
|||||||||||||||||||| ||| |||||||||| ||| ||| |||||||||||||
Sbjct: 459 cctggtgccgcacatgaacctaagcgatgccaagctcgccggttacaacatccccgccga 518
Query: 1258 gagcaagatcctcgtcaacgcctggtacctcgccaacaacccc 1300
||||||||||| ||||||||||| ||| |||||| |||||
Sbjct: 519 atccaagatcctcggcaacgcctggttccttgccaacgacccc 561
Score = 85.8 bits (43), Expect = 4e-015
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 731 cagagcttcgagtacaactacggcgacttcatccccatcctccgtccgttcctccgcggc 790
||||||||||| |||||||||||||||||||||||| | ||||| || ||||||||| ||
Sbjct: 4 cagagcttcgactacaactacggcgacttcatccccgtactccgccccttcctccgccgc 63
Query: 791 tacctca 797
|||||||
Sbjct: 64 tacctca 70
>gb|AV913914.1|AV913914 AV913914 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags23l19 5', mRNA sequence
Length = 561
Score = 165 bits (83), Expect = 6e-039
Identities = 152/175 (86%)
Strand = Plus / Plus
Query: 903 tcaagtgcgccattgatcacatactggaggcacagcagaagggtgagatcaacgaggaca 962
||||||||||||| || ||||| ||||| || | |||||| ||||||||| | ||||
Sbjct: 180 tcaagtgcgccatggaccacatcctggaagccgaaaggaagggcgagatcaaccacgaca 239
Query: 963 acgtgctcttcatcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcga 1022
|||| |||| ||||||||||||||| ||||| ||||| || ||||| |||||||||||||
Sbjct: 240 acgtcctctacatcgtcgagaacatcaacgtcgcagccattgagacgacgctgtggtcga 299
Query: 1023 tcgagtgggcggtcgctgagctggtgaaccacccggagatccagcagaagctgcg 1077
||||||||| |||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 300 tcgagtggggcctcgcggagctggtgaaccacccggagatccagcagaagctgcg 354
Score = 149 bits (75), Expect = 3e-034
Identities = 128/146 (87%)
Strand = Plus / Plus
Query: 1138 cctcccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgct 1197
|||||||||||||||| | || | ||||||||||| || || || ||||||||||||||
Sbjct: 415 cctcccctacctgcagtccgtcgtgaaggagacgctccgcctccgcatggccatcccgct 474
Query: 1198 gctggtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccga 1257
||||||||||||||||||||| ||| |||||||||| ||| |||||||||||||||||
Sbjct: 475 cctggtgccgcacatgaacctcagcgatgccaagctcgccggttacgacatccccgccga 534
Query: 1258 gagcaagatcctcgtcaacgcctggt 1283
|||||||||||||||||||||||
Sbjct: 535 atccaagatcctcgtcaacgcctggt 560
Score = 83.8 bits (42), Expect = 2e-014
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 736 cttcgagtacaactacggcgacttcatccccatcctccgtccgttcctccgcggctacct 795
|||||| |||||||||||||||||||||||| ||||||| || ||||||||| |||||||
Sbjct: 25 cttcgactacaactacggcgacttcatccccgtcctccgccccttcctccgccgctacct 84
Query: 796 ca 797
||
Sbjct: 85 ca 86
>gb|BJ463086.1|BJ463086 BJ463086 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags25l03 5', mRNA sequence
Length = 570
Score = 165 bits (83), Expect = 6e-039
Identities = 152/175 (86%)
Strand = Plus / Plus
Query: 903 tcaagtgcgccattgatcacatactggaggcacagcagaagggtgagatcaacgaggaca 962
||||||||||||| || ||||| ||||| || | |||||| ||||||||| | ||||
Sbjct: 299 tcaagtgcgccatggaccacatcctggaagccgaaaggaagggcgagatcaaccacgaca 358
Query: 963 acgtgctcttcatcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcga 1022
|||| |||| ||||||||||||||| ||||| ||||| || ||||| |||||||||||||
Sbjct: 359 acgtcctctacatcgtcgagaacatcaacgtcgcagccattgagacgacgctgtggtcga 418
Query: 1023 tcgagtgggcggtcgctgagctggtgaaccacccggagatccagcagaagctgcg 1077
||||||||| |||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 419 tcgagtggggcctcgcggagctggtgaaccacccggagatccagcagaagctgcg 473
Score = 157 bits (79), Expect = 1e-036
Identities = 161/187 (86%), Gaps = 1/187 (0%)
Strand = Plus / Plus
Query: 611 ctgcagctcatgatgtacaacaacgtataccggatcatgttcgaccggcgcttcgagagc 670
|||||||| |||||||||||| || | | ||| |||||||||||||| || ||||||| |
Sbjct: 20 ctgcagct-atgatgtacaacgacatgttccgcatcatgttcgaccgccggttcgagacc 78
Query: 671 atggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctcgcg 730
||| ||||||||||||| || |||| ||||||||||| |||||||||| |||| |
Sbjct: 79 gtggccgacccgctcttcaaccagctcaaggcgctcaacgccgagcgcagcatcctctcc 138
Query: 731 cagagcttcgagtacaactacggcgacttcatccccatcctccgtccgttcctccgcggc 790
||||||||||| |||||||||||||||||||||||| ||||||| || ||||||||| ||
Sbjct: 139 cagagcttcgactacaactacggcgacttcatccccgtcctccgccccttcctccgccgc 198
Query: 791 tacctca 797
|||||||
Sbjct: 199 tacctca 205
>gb|BQ470705.1|BQ470705 HX03M12r HX Hordeum vulgare subsp. vulgare cDNA clone HX03M12
5-PRIME, mRNA sequence
Length = 650
Score = 165 bits (83), Expect = 6e-039
Identities = 152/175 (86%)
Strand = Plus / Plus
Query: 903 tcaagtgcgccattgatcacatactggaggcacagcagaagggtgagatcaacgaggaca 962
||||||||||||| || ||||| ||||| || | |||||| ||||||||| | ||||
Sbjct: 258 tcaagtgcgccatggaccacatcctggaagccgaaaggaagggcgagatcaaccacgaca 317
Query: 963 acgtgctcttcatcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcga 1022
|||| |||| ||||||||||||||| ||||| ||||| || ||||| |||||||||||||
Sbjct: 318 acgtcctctacatcgtcgagaacatcaacgtcgcagccattgagacgacgctgtggtcga 377
Query: 1023 tcgagtgggcggtcgctgagctggtgaaccacccggagatccagcagaagctgcg 1077
||||||||| |||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 378 tcgagtggggcctcgcggagctggtgaaccacccggagatccagcagaagctgcg 432
Score = 163 bits (82), Expect = 2e-038
Identities = 138/157 (87%)
Strand = Plus / Plus
Query: 1138 cctcccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgct 1197
|||||||||||||||| | || | ||||||||||| || || || ||||||||||||||
Sbjct: 493 cctcccctacctgcagtccgtcgtgaaggagacgctccgcctccgcatggccatcccgct 552
Query: 1198 gctggtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccga 1257
||||||||||||||||||||| ||| |||||||||| ||| |||||||||||||||||
Sbjct: 553 cctggtgccgcacatgaacctcagcgatgccaagctcgccggttacgacatccccgccga 612
Query: 1258 gagcaagatcctcgtcaacgcctggtacctcgccaac 1294
||||||||||||||||||||||| ||||||||||
Sbjct: 613 atccaagatcctcgtcaacgcctggttcctcgccaac 649
Score = 147 bits (74), Expect = 1e-033
Identities = 134/154 (87%)
Strand = Plus / Plus
Query: 644 atcatgttcgaccggcgcttcgagagcatggacgacccgctcttcctccgcctcagggcg 703
|||||||||||||| || ||||||| | ||| ||||||||||||| || |||| ||||
Sbjct: 11 atcatgttcgaccgccggttcgagaccgtggccgacccgctcttcaaccagctcaaggcg 70
Query: 704 ctcaacggcgagcgcagccgcctcgcgcagagcttcgagtacaactacggcgacttcatc 763
||||||| |||||||||| |||| | ||||||||||| |||||||||||||||||||||
Sbjct: 71 ctcaacgccgagcgcagcatcctctcccagagcttcgactacaactacggcgacttcatc 130
Query: 764 cccatcctccgtccgttcctccgcggctacctca 797
||| ||||||| || ||||||||| |||||||||
Sbjct: 131 cccgtcctccgccccttcctccgccgctacctca 164
>gb|BF253649.2|BF253649 HVSMEf0001L18f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0001L18f, mRNA sequence
Length = 530
Score = 163 bits (82), Expect = 2e-038
Identities = 124/138 (89%)
Strand = Plus / Plus
Query: 940 gaagggtgagatcaacgaggacaacgtgctcttcatcgtcgagaacattaacgttgcagc 999
|||||| ||||||||| | |||||||| |||| ||||||||||||||| ||||| |||||
Sbjct: 12 gaagggcgagatcaaccacgacaacgtcctctacatcgtcgagaacatcaacgtcgcagc 71
Query: 1000 gatcgagaccacgctgtggtcgatcgagtgggcggtcgctgagctggtgaaccacccgga 1059
|| ||||| |||||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 72 cattgagacgacgctgtggtcgatcgagtggggcctcgcggagctggtgaaccacccgga 131
Query: 1060 gatccagcagaagctgcg 1077
||||||||||||||||||
Sbjct: 132 gatccagcagaagctgcg 149
Score = 125 bits (63), Expect = 5e-027
Identities = 127/146 (86%), Gaps = 2/146 (1%)
Strand = Plus / Plus
Query: 1138 cctcccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgct 1197
|||||||||||||||| | || | ||||||||||| | ||| || ||||||||||||||
Sbjct: 210 cctcccctacctgcagtccgtcgtgaaggagacgctcccgctccgcatggccatcccgct 269
Query: 1198 gctggtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccga 1257
|||| |||||||||||||||| |||| |||||||||| ||| |||||||||||||||||
Sbjct: 270 cctggggccgcacatgaacctcaacgatgccaagctcgccgggtacgacatccccgccga 329
Query: 1258 gagcaagatcctcgtcaacgcctggt 1283
||||||||||||| |||||||||
Sbjct: 330 -ttcaagatcctcgtc-acgcctggt 353
>gb|BF261518.2|BF261518 HV_CEa0001H23f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0001H23f, mRNA sequence
Length = 602
Score = 163 bits (82), Expect = 2e-038
Identities = 142/162 (87%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| |||||||| |||||||| ||||||||||||||||||||||||| || |||||
Sbjct: 340 ggaggtcctccacacccagggcgtccagttcggctcccgcacccgcaacgtcgtgttcga 399
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||| || | |||||| |||||||||| |||||| |||||||||||||||||||||||
Sbjct: 400 catcttaaccggcaagggacaggacatggggttcacggtgtacggcgaccactggcgcaa 459
Query: 463 gatgcgccgcatcatgaccgtgcccttcttcaccaacaaggt 504
|| || | |||||||| ||||||||||| |||| ||||||
Sbjct: 460 gaatcggctgatcatgacagtgcccttctttaccagcaaggt 501
Score = 83.8 bits (42), Expect = 2e-014
Identities = 45/46 (97%)
Strand = Plus / Plus
Query: 207 tcgggaactggctgcaggtcggcgacgacctcaaccaccgcaacct 252
|||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 tcggcaactggctgcaggtcggcgacgacctcaaccaccgcaacct 249
Score = 40.2 bits (20), Expect = 0.24
Identities = 41/48 (85%)
Strand = Plus / Plus
Query: 271 gttcggcgacgtcttcctcctccggatggggcagcgcaacctggtggt 318
||||||||| || ||||||||||| ||||| ||||||||||||||
Sbjct: 268 gttcggcgaggtgttcctcctccgcatgggcgtccgcaacctggtggt 315
>emb|AJ234782.1|HVU234782 Hordeum vulgare genomic DNA fragment; clone MWG2112.rev
Length = 358
Score = 161 bits (81), Expect = 9e-038
Identities = 156/181 (86%)
Strand = Plus / Plus
Query: 617 ctcatgatgtacaacaacgtataccggatcatgttcgaccggcgcttcgagagcatggac 676
||||||||||||||| || | | ||| |||||||||||||| || ||||||| | ||| |
Sbjct: 1 ctcatgatgtacaacgacatgttccgcatcatgttcgaccgccggttcgagaccgtggcc 60
Query: 677 gacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctcgcgcagagc 736
|||||||||||| || |||| ||||||||||| |||||||||| |||| | ||||||
Sbjct: 61 gacccgctcttcaaccagctcaaggcgctcaacgccgagcgcagcatcctctcccagagc 120
Query: 737 ttcgagtacaactacggcgacttcatccccatcctccgtccgttcctccgcggctacctc 796
||||| |||||||||||||||||||||||| ||||||| || ||||||||| ||||||||
Sbjct: 121 ttcgactacaactacggcgacttcatccccgtcctccgccccttcctccgccgctacctc 180
Query: 797 a 797
|
Sbjct: 181 a 181
>gb|AL501837.1|AL501837 AL501837 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW05I23u 3', mRNA sequence
Length = 473
Score = 137 bits (69), Expect = 1e-030
Identities = 146/173 (84%)
Strand = Plus / Minus
Query: 1413 ggagctgccccgggatcatcctcgccctgcccatcctcggcatcaccatcggtcgcctcg 1472
|||| |||||||||||||||||||| ||||||||| |||||||||| |||| ||||| |
Sbjct: 468 ggagttgccccgggatcatcctcgcgctgcccatcatcggcatcacgctcggacgcctgg 409
Query: 1473 tccagaacttcgagctgctgccgccgcccgggcaggacaaggtngacaccaccgagaagg 1532
| ||||||||||||||||| |||||||| |||||||||||| | ||| |||||| ||||
Sbjct: 408 tgcagaacttcgagctgctnccgccgccggggcaggacaagatcgaccccaccgngaagc 349
Query: 1533 gaggccagttcagtctccacatcttgaagcattccaccatcgtgtgcaagcca 1585
||| |||||||| ||| ||| | ||||| || ||||||| |||||||||
Sbjct: 348 cagggcagttcagcaaccagatcctcaagcacgcccccatcgtntgcaagcca 296
>gb|BF256412.2|BF256412 HVSMEf0009I22f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0009I22f, mRNA sequence
Length = 765
Score = 133 bits (67), Expect = 2e-029
Identities = 146/171 (85%), Gaps = 1/171 (0%)
Strand = Plus / Plus
Query: 903 tcaagtgcgccattgatcacatactggaggcacagcagaagggtgagatcaacgaggaca 962
||||||||||||| || ||||| ||||| || | |||||| ||||||||| | ||||
Sbjct: 510 tcaagtgcgccatggaccacatcctggaagccgaaaggaagggcgagatcaaccacgaca 569
Query: 963 acgtgctcttcatcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcga 1022
|||| |||| ||||||||||||||| ||||| ||| | || | ||| |||||||||||||
Sbjct: 570 acgtcctctacatcgtcgagaacatcaacgtcgcaaccattgggacgacgctgtggtcga 629
Query: 1023 tcgagtgggcggtcgctgagctggtgaaccacccggagatccagcagaagc 1073
|||||||||| |||| |||||||||||||||||||||||||| |||||||
Sbjct: 630 tcgagtgggc-ctcgcggagctggtgaaccacccggagatccaccagaagc 679
>gb|BQ764131.1|BQ764131 EBro03_SQ006_I11_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ006_I11 5', mRNA sequence
Length = 435
Score = 131 bits (66), Expect = 8e-029
Identities = 132/154 (85%)
Strand = Plus / Plus
Query: 1360 cgtcgaggccaacggcaacgacttcaggtacctgcccttcggcgtcggccgcaggagctg 1419
|||||||||||| ||||| |||||| ||| |||||||||||||||| || ||||||||
Sbjct: 4 cgtcgaggccaatggcaatgacttccggtttgtgcccttcggcgtcggtcggaggagctg 63
Query: 1420 ccccgggatcatcctcgccctgcccatcctcggcatcaccatcggtcgcctcgtccagaa 1479
||| || ||||||||||| ||||||||| |||||||||| |||| ||||| || |||||
Sbjct: 64 cccgggaatcatcctcgctctgcccatcatcggcatcacgctcggccgccttgtgcagaa 123
Query: 1480 cttcgagctgctgccgccgcccgggcaggacaag 1513
|||| |||| |||||||||| ||| ||||||||
Sbjct: 124 cttccagctactgccgccgctggggaaggacaag 157
>gb|AL503971.1|AL503971 AL503971 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW01A09V 5', mRNA sequence
Length = 108
Score = 119 bits (60), Expect = 3e-025
Identities = 96/107 (89%), Gaps = 1/107 (0%)
Strand = Plus / Plus
Query: 399 tcgacatcttca-cggacaaggggcaggacatggtgttcaccgtgtacggcgaccactgg 457
|||||||||||| || ||| || || |||||||||||||| || || ||||||||||||
Sbjct: 1 tcgacatcttcaccgcgcaaaggccangacatggtgttcactgtctatggcgaccactgg 60
Query: 458 cgcaagatgcgccgcatcatgaccgtgcccttcttcaccaacaaggt 504
|||||||||||||| |||||||| |||||||||||||||||||||||
Sbjct: 61 cgcaagatgcgccggatcatgacggtgcccttcttcaccaacaaggt 107
>gb|BQ767980.1|BQ767980 EBro08_SQ010_I12_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ010_I12 5', mRNA sequence
Length = 420
Score = 119 bits (60), Expect = 3e-025
Identities = 92/103 (89%)
Strand = Plus / Plus
Query: 1474 ccagaacttcgagctgctgccgccgcccgggcaggacaaggtngacaccaccgagaaggg 1533
||||||||||| ||| |||||||||||| ||||||||| | |||||||| ||||||||
Sbjct: 1 ccagaacttcgtgctctcgccgccgcccggccaggacaagctcgacaccacggagaaggg 60
Query: 1534 aggccagttcagtctccacatcttgaagcattccaccatcgtg 1576
||||||||||| ||||||||||||||||| ||||||||||||
Sbjct: 61 cggccagttcagcctccacatcttgaagcactccaccatcgtg 103
>emb|AJ234781.1|HVU234781 Hordeum vulgare genomic DNA fragment; clone MWG2112.uni
Length = 392
Score = 113 bits (57), Expect = 2e-023
Identities = 78/85 (91%)
Strand = Plus / Minus
Query: 993 ttgcagcgatcgagaccacgctgtggtcgatcgagtgggcggtcgctgagctggtgaacc 1052
||||||| || ||||| |||||||||||||||||||||| |||| |||||||||||||
Sbjct: 155 ttgcagccattgagacgacgctgtggtcgatcgagtggggcctcgcggagctggtgaacc 96
Query: 1053 acccggagatccagcagaagctgcg 1077
|||||||||||||||||||||||||
Sbjct: 95 acccggagatccagcagaagctgcg 71
>gb|BI779253.2|BI779253 EBro01_SQ003_H11_R root, 3 week, hydroponic grown, no treatment, cv
Optic, EBro01 Hordeum vulgare subsp. vulgare cDNA clone
EBro01_SQ003_H11 5', mRNA sequence
Length = 489
Score = 111 bits (56), Expect = 8e-023
Identities = 136/163 (83%)
Strand = Plus / Plus
Query: 1138 cctcccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgct 1197
|||||| ||||||||||| || ||||||| || || || || || |||| |||||| ||
Sbjct: 298 cctcccttacctgcaggccgtcgtcaaggaaaccctccgcctccgcatgggcatcccact 357
Query: 1198 gctggtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccga 1257
|| ||||| |||||||||||| | || ||||||||| || |||||||||||||| ||
Sbjct: 358 cctcgtgccccacatgaacctcaaggatgccaagctcactggctacgacatccccgctga 417
Query: 1258 gagcaagatcctcgtcaacgcctggtacctcgccaacaacccc 1300
| ||||||||||||||||||||||| |||||||||| |||||
Sbjct: 418 gtccaagatcctcgtcaacgcctggttcctcgccaacgacccc 460
Score = 85.8 bits (43), Expect = 4e-015
Identities = 106/127 (83%)
Strand = Plus / Plus
Query: 940 gaagggtgagatcaacgaggacaacgtgctcttcatcgtcgagaacattaacgttgcagc 999
|||||||||||||||| | |||||||| || | ||| | |||||||| |||| | |||
Sbjct: 100 gaagggtgagatcaaccacgacaacgtcctatacattggggagaacatcaacggcggagc 159
Query: 1000 gatcgagaccacgctgtggtcgatcgagtgggcggtcgctgagctggtgaaccacccgga 1059
|| ||||| || ||||||||||||||||||| || || ||||||||||||||||||||
Sbjct: 160 aattgagacgaccctgtggtcgatcgagtggggagttgcagagctggtgaaccacccgga 219
Query: 1060 gatccag 1066
||||||
Sbjct: 220 catccag 226
>gb|BM370693.2|BM370693 EBro04_SQ001_N15_R root, 3 week, salt-stressed, cv Optic, EBro04
Hordeum vulgare subsp. vulgare cDNA clone
EBro04_SQ001_N15 5', mRNA sequence
Length = 386
Score = 105 bits (53), Expect = 5e-021
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| |||||||| |||||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 315 ggaggtcctccacacccagggcgtcgagttcggctcccgcacccgcaacgtcgtcttcga 374
Query: 403 catcttcac 411
|||||||||
Sbjct: 375 catcttcac 383
Score = 83.8 bits (42), Expect = 2e-014
Identities = 45/46 (97%)
Strand = Plus / Plus
Query: 207 tcgggaactggctgcaggtcggcgacgacctcaaccaccgcaacct 252
|||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 tcggcaactggctgcaggtcggcgacgacctcaaccaccgcaacct 224
Score = 44.1 bits (22), Expect = 0.016
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 271 gttcggcgacgtcttcctcctccggatggggcagcgcaacctggtggtggtctc 324
||||||||| || ||||||||||| ||||| |||||||||||||| |||||
Sbjct: 243 gttcggcgaggtgttcctcctccgcatgggcgtccgcaacctggtggtcgtctc 296
>gb|BE420941.1|BE420941 HWM004.B06 ITEC HWM Barley Leaf Library Hordeum vulgare subsp.
vulgare cDNA clone HWM004.B06, mRNA sequence
Length = 1155
Score = 97.7 bits (49), Expect = 1e-018
Identities = 66/72 (91%)
Strand = Plus / Plus
Query: 1505 caggacaaggtngacaccaccgagaagggaggccagttcagtctccacatcttgaagcat 1564
||||||||| | |||||||| |||||||| ||||||||||| |||||||||||||||||
Sbjct: 113 caggacaagctcgacaccacggagaagggcggccagttcagcctccacatcttgaagcac 172
Query: 1565 tccaccatcgtg 1576
||||||||||||
Sbjct: 173 tccaccatcgtg 184
>gb|BI959145.1|BI959145 HVSMEn0018G02f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0018G02f,
mRNA sequence
Length = 682
Score = 97.7 bits (49), Expect = 1e-018
Identities = 118/141 (83%)
Strand = Plus / Minus
Query: 1344 tcgaggaggagaagcacgtcgaggccaacggcaacgacttcaggtacctgcccttcggcg 1403
|||||||||| |||| |||||||||| ||||||||||||| ||| | | ||||| ||||
Sbjct: 509 tcgaggaggaaaagcccgtcgaggcccgcggcaacgacttccggttcgtccccttgggcg 450
Query: 1404 tcggccgcaggagctgccccgggatcatcctcgccctgcccatcctcggcatcaccatcg 1463
||| || | |||| ||||| ||||||||| |||| ||||||||| |||||||||| |||
Sbjct: 449 tcgcccccgggaggtgcccggggatcatcttcgcgctgcccatcatcggcatcacgctcg 390
Query: 1464 gtcgcctcgtccagaacttcg 1484
||||| || ||||||||||
Sbjct: 389 cacgcctggtgcagaacttcg 369
Score = 46.1 bits (23), Expect = 0.004
Identities = 64/78 (82%)
Strand = Plus / Minus
Query: 1508 gacaaggtngacaccaccgagaagggaggccagttcagtctccacatcttgaagcattcc 1567
|||||| | ||||||||||||||| ||| |||||||| ||| ||| | ||||| ||
Sbjct: 314 gacaagatcgacaccaccgagaagccagggcagttcagcaaccagatcctcaagcacgcc 255
Query: 1568 accatcgtgtgcaagcca 1585
|||||||| |||||||||
Sbjct: 254 accatcgtctgcaagcca 237
Score = 42.2 bits (21), Expect = 0.061
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 611 ctgcagctcatgatgtacaac 631
|||||||||||||||||||||
Sbjct: 335 ctgcagctcatgatgtacaac 315
>gb|BM370681.2|BM370681 EBro04_SQ001_M14_R root, 3 week, salt-stressed, cv Optic, EBro04
Hordeum vulgare subsp. vulgare cDNA clone
EBro04_SQ001_M14 5', mRNA sequence
Length = 377
Score = 93.7 bits (47), Expect = 2e-017
Identities = 59/63 (93%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| |||||||| |||||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 315 ggaggtcctccacacccagggcgtcgagttcggctcccgcacccgcaacgtcgtcttcga 374
Query: 403 cat 405
|||
Sbjct: 375 cat 377
Score = 83.8 bits (42), Expect = 2e-014
Identities = 45/46 (97%)
Strand = Plus / Plus
Query: 207 tcgggaactggctgcaggtcggcgacgacctcaaccaccgcaacct 252
|||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 tcggcaactggctgcaggtcggcgacgacctcaaccaccgcaacct 224
Score = 44.1 bits (22), Expect = 0.016
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 271 gttcggcgacgtcttcctcctccggatggggcagcgcaacctggtggtggtctc 324
||||||||| || ||||||||||| ||||| |||||||||||||| |||||
Sbjct: 243 gttcggcgaggtgttcctcctccgcatgggcgtccgcaacctggtggtcgtctc 296
>gb|BQ458589.1|BQ458589 HA04M20r HA Hordeum vulgare subsp. vulgare cDNA clone HA04M20
5-PRIME, mRNA sequence
Length = 630
Score = 62.0 bits (31), Expect = 7e-008
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 1379 gacttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgcc 1438
|||||| ||| ||| || |||||||| ||||| | ||||||||||| |||||||||||
Sbjct: 209 gacttccggttcctcccgttcggcgtgggccggcgcagctgccccggcatcatcctcgcg 268
Query: 1439 ctgcccatcct 1449
|||||||||||
Sbjct: 269 ctgcccatcct 279
Score = 38.2 bits (19), Expect = 0.96
Identities = 28/31 (90%)
Strand = Plus / Plus
Query: 1269 tcgtcaacgcctggtacctcgccaacaaccc 1299
||||||||||||||| || |||||||||||
Sbjct: 90 tcgtcaacgcctggtggctggccaacaaccc 120
>gb|BQ656344.1|BQ656344 HA04M20u HA Hordeum vulgare subsp. vulgare cDNA clone HA04M20
3-PRIME, mRNA sequence
Length = 480
Score = 62.0 bits (31), Expect = 7e-008
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 1379 gacttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgcc 1438
|||||| ||| ||| || |||||||| ||||| | ||||||||||| |||||||||||
Sbjct: 465 gacttccggttcctcccgttcggcgtgggccggcgcagctgccccggcatcatcctcgcg 406
Query: 1439 ctgcccatcct 1449
|||||||||||
Sbjct: 405 ctgcccatcct 395
>gb|BF621128.2|BF621128 HVSMEa0004D22f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0004D22f, mRNA sequence
Length = 781
Score = 46.1 bits (23), Expect = 0.004
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 443 tacggcgaccactggcgcaagatgcgc 469
|||||||||||||||||| ||||||||
Sbjct: 414 tacggcgaccactggcgccagatgcgc 440
>gb|AL508615.1|AL508615 AL508615 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY09E15V 5',
mRNA sequence
Length = 502
Score = 44.1 bits (22), Expect = 0.016
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 530 gaggccgaggccgccgccgtcg 551
||||||||||||||||||||||
Sbjct: 182 gaggccgaggccgccgccgtcg 203
>gb|BQ460875.1|BQ460875 HA05K02r HA Hordeum vulgare subsp. vulgare cDNA clone HA05K02
5-PRIME, mRNA sequence
Length = 332
Score = 44.1 bits (22), Expect = 0.016
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 530 gaggccgaggccgccgccgtcg 551
||||||||||||||||||||||
Sbjct: 101 gaggccgaggccgccgccgtcg 122
>gb|BM098719.2|BM098719 EBem08_SQ003_O03_R embryo, 40 DPA, no treatment, cv Optic, EBem08
Hordeum vulgare subsp. vulgare cDNA clone
EBem08_SQ003_O03 5', mRNA sequence
Length = 424
Score = 44.1 bits (22), Expect = 0.016
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacg 1171
|||||||||||||||||| | |||||||||
Sbjct: 327 ccctacctgcaggcggtggtgaaggagacg 356
>gb|BI779473.2|BI779473 EBro01_SQ004_C10_R root, 3 week, hydroponic grown, no treatment, cv
Optic, EBro01 Hordeum vulgare subsp. vulgare cDNA clone
EBro01_SQ004_C10 5', mRNA sequence
Length = 596
Score = 44.1 bits (22), Expect = 0.016
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 530 gaggccgaggccgccgccgtcg 551
||||||||||||||||||||||
Sbjct: 258 gaggccgaggccgccgccgtcg 279
>gb|BI777331.2|BI777331 EBro03_SQ002_O16_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ002_O16 5', mRNA sequence
Length = 443
Score = 44.1 bits (22), Expect = 0.016
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 530 gaggccgaggccgccgccgtcg 551
||||||||||||||||||||||
Sbjct: 267 gaggccgaggccgccgccgtcg 288
>gb|BU995653.1|BU995653 HM10O21r HM Hordeum vulgare subsp. vulgare cDNA clone HM10O21
5-PRIME, mRNA sequence
Length = 367
Score = 44.1 bits (22), Expect = 0.016
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacg 1171
|||||||||||||||||| | |||||||||
Sbjct: 145 ccctacctgcaggcggtggtgaaggagacg 174
>gb|BU996849.1|BU996849 HM14P16r HM Hordeum vulgare subsp. vulgare cDNA clone HM14P16
5-PRIME, mRNA sequence
Length = 625
Score = 44.1 bits (22), Expect = 0.016
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 530 gaggccgaggccgccgccgtcg 551
||||||||||||||||||||||
Sbjct: 86 gaggccgaggccgccgccgtcg 107
>gb|CA002964.1|CA002964 HS09A09r HS Hordeum vulgare subsp. vulgare cDNA clone HS09A09
5-PRIME, mRNA sequence
Length = 338
Score = 44.1 bits (22), Expect = 0.016
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 530 gaggccgaggccgccgccgtcg 551
||||||||||||||||||||||
Sbjct: 243 gaggccgaggccgccgccgtcg 264
>gb|CB883323.1|CB883323 HQ01O03w HQ Hordeum vulgare subsp. vulgare cDNA clone HQ01O03
3-PRIME, mRNA sequence
Length = 412
Score = 44.1 bits (22), Expect = 0.016
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 530 gaggccgaggccgccgccgtcg 551
||||||||||||||||||||||
Sbjct: 240 gaggccgaggccgccgccgtcg 261
>gb|CV058158.1|CV058158 BNEL35a1 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL35a1 5' similar to
OSJNBa0084K11.15, mRNA sequence
Length = 613
Score = 44.1 bits (22), Expect = 0.016
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 530 gaggccgaggccgccgccgtcg 551
||||||||||||||||||||||
Sbjct: 239 gaggccgaggccgccgccgtcg 260
>gb|CV059651.1|CV059651 BNEL4E1 Barley EST endosperm library Hordeum vulgare subsp. vulgare
cDNA clone BNEL4E1 5' similar to Oryza sativa genomic
DNA, chromosome 4, BAC clone: OSJNBa0084K11, complete
sequence, mRNA sequence
Length = 537
Score = 44.1 bits (22), Expect = 0.016
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 530 gaggccgaggccgccgccgtcg 551
||||||||||||||||||||||
Sbjct: 239 gaggccgaggccgccgccgtcg 260
>gb|BQ763612.1|BQ763612 EBro02_SQ008_N21_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ008_N21 5', mRNA sequence
Length = 571
Score = 42.2 bits (21), Expect = 0.061
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 235 cctcaaccaccgcaacctcgc 255
|||||||||||||||||||||
Sbjct: 403 cctcaaccaccgcaacctcgc 423
>gb|BG300197.1|BG300197 HVSMEb0010N13f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0010N13f, mRNA sequence
Length = 526
Score = 40.2 bits (20), Expect = 0.24
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 529 ggaggccgaggccgccgccg 548
||||||||||||||||||||
Sbjct: 245 ggaggccgaggccgccgccg 264
>gb|BG301080.1|BG301080 HVSMEb0019H18f Hordeum vulgare seedling shoot EST library HVcDNA0002
(Dehydration stress) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEb0019H18f, mRNA sequence
Length = 926
Score = 40.2 bits (20), Expect = 0.24
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 1072 gctgcggcaggagctggacacggtgctcgggc 1103
||||| ||||| ||||||||||||||| ||||
Sbjct: 460 gctgcagcaggcgctggacacggtgctggggc 491
>gb|BE602604.2|BE602604 HVSMEh0100G11f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0100G11f, mRNA sequence
Length = 733
Score = 40.2 bits (20), Expect = 0.24
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 529 ggaggccgaggccgccgccg 548
||||||||||||||||||||
Sbjct: 268 ggaggccgaggccgccgccg 287
>gb|BI954884.1|BI954884 HVSMEm0020D23f Hordeum vulgare green seedling EST library HVcDNA0014
(Blumeria infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEm0020D23f, mRNA sequence
Length = 659
Score = 40.2 bits (20), Expect = 0.24
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 1072 gctgcggcaggagctggacacggtgctcgggc 1103
||||| ||||| ||||||||||||||| ||||
Sbjct: 61 gctgcagcaggcgctggacacggtgctggggc 92
>gb|BI955713.1|BI955713 HVSMEm0024C20f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0024C20f, mRNA sequence
Length = 682
Score = 40.2 bits (20), Expect = 0.24
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 529 ggaggccgaggccgccgccg 548
||||||||||||||||||||
Sbjct: 298 ggaggccgaggccgccgccg 317
>gb|BI956938.1|BI956938 HVSMEn0006D16f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0006D16f, mRNA sequence
Length = 658
Score = 40.2 bits (20), Expect = 0.24
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 322 ctcgtcgccgccgctggcgc 341
||||||||||||||||||||
Sbjct: 240 ctcgtcgccgccgctggcgc 259
>gb|CA009008.1|CA009008 HU12O03r HU Hordeum vulgare subsp. vulgare cDNA clone HU12O03
5-PRIME, mRNA sequence
Length = 422
Score = 40.2 bits (20), Expect = 0.24
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 322 ctcgtcgccgccgctggcgc 341
||||||||||||||||||||
Sbjct: 340 ctcgtcgccgccgctggcgc 359
>gb|CA011333.1|CA011333 HT06E05u HT Hordeum vulgare subsp. vulgare cDNA clone HT06E05
3-PRIME, mRNA sequence
Length = 549
Score = 40.2 bits (20), Expect = 0.24
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1315 gcccgaggagttccggcccgagcg 1338
|||||||||||||||||| |||||
Sbjct: 512 gcccgaggagttccggccggagcg 489
Score = 40.2 bits (20), Expect = 0.24
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 1394 cccttcggcgtcggccgcaggagctgccccgg 1425
|||||||||| ||||||||||| ||||||||
Sbjct: 430 cccttcggcgccggccgcaggatgtgccccgg 399
>gb|CA012057.1|CA012057 HT04F04r HT Hordeum vulgare subsp. vulgare cDNA clone HT04F04
5-PRIME, mRNA sequence
Length = 399
Score = 40.2 bits (20), Expect = 0.24
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1315 gcccgaggagttccggcccgagcg 1338
|||||||||||||||||| |||||
Sbjct: 368 gcccgaggagttccggccggagcg 391
>gb|CA012725.1|CA012725 HT06E05r HT Hordeum vulgare subsp. vulgare cDNA clone HT06E05
5-PRIME, mRNA sequence
Length = 700
Score = 40.2 bits (20), Expect = 0.24
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 1394 cccttcggcgtcggccgcaggagctgccccgg 1425
|||||||||| ||||||||||| ||||||||
Sbjct: 310 cccttcggcgccggccgcaggatgtgccccgg 341
Score = 40.2 bits (20), Expect = 0.24
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1315 gcccgaggagttccggcccgagcg 1338
|||||||||||||||||| |||||
Sbjct: 228 gcccgaggagttccggccggagcg 251
>gb|CA018435.1|CA018435 HV08J21r HV Hordeum vulgare subsp. vulgare cDNA clone HV08J21
5-PRIME, mRNA sequence
Length = 497
Score = 40.2 bits (20), Expect = 0.24
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 529 ggaggccgaggccgccgccg 548
||||||||||||||||||||
Sbjct: 292 ggaggccgaggccgccgccg 311
>gb|CA030582.1|CA030582 HX07H18r HX Hordeum vulgare subsp. vulgare cDNA clone HX07H18
5-PRIME, mRNA sequence
Length = 616
Score = 40.2 bits (20), Expect = 0.24
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 1138 cctcccctacctgcaggcggtgatcaaggagacgctgcgg 1177
|||| ||||||| || || || ||||||||||||||||||
Sbjct: 301 cctcgcctacctccacgccgtcatcaaggagacgctgcgg 340
>gb|CV054678.1|CV054678 BNEL112b11 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL112b11 5' similar to putative
MFP1 attachment factor 1, mRNA sequence
Length = 287
Score = 40.2 bits (20), Expect = 0.24
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 529 ggaggccgaggccgccgccg 548
||||||||||||||||||||
Sbjct: 245 ggaggccgaggccgccgccg 264
>gb|CV057232.1|CV057232 BNEL25e10 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL25e10 5' similar to putative MFP1
attachment factor 1, mRNA sequence
Length = 291
Score = 40.2 bits (20), Expect = 0.24
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 529 ggaggccgaggccgccgccg 548
||||||||||||||||||||
Sbjct: 249 ggaggccgaggccgccgccg 268
>gb|CV057847.1|CV057847 BNEL31e12 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL31e12 5' similar to putative MFP1
attachment factor 1, mRNA sequence
Length = 287
Score = 40.2 bits (20), Expect = 0.24
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 529 ggaggccgaggccgccgccg 548
||||||||||||||||||||
Sbjct: 245 ggaggccgaggccgccgccg 264
>gb|AY641412.1| Hordeum vulgare subsp. vulgare retrotransposon Sandra5, complete
sequence; splicing factor SF2-like protein (SF2) and
universal stress protein (USP1) genes and Hv
receptor-kinase-like pseudogene, complete cds; and
retrotransposons Sandra6 and Sandra7, complete sequence
Length = 82293
Score = 40.2 bits (20), Expect = 0.24
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 598 gctccgccgacgcctgcagctcatgatgtacaacaa 633
||||||||| ||| |||| || ||||||||||||||
Sbjct: 53887 gctccgccgccgcatgcacctgatgatgtacaacaa 53852
>gb|AL508836.1|AL508836 AL508836 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY09P05V 5',
mRNA sequence
Length = 665
Score = 38.2 bits (19), Expect = 0.96
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 176 ctgcctcccggccccgtcc 194
|||||||||||||||||||
Sbjct: 309 ctgcctcccggccccgtcc 291
>gb|BI777219.1|BI777219 EBro03_SQ002_H14_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ002_H14 5', mRNA sequence
Length = 334
Score = 38.2 bits (19), Expect = 0.96
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 176 ctgcctcccggccccgtcc 194
|||||||||||||||||||
Sbjct: 228 ctgcctcccggccccgtcc 210
>gb|BF624189.2|BF624189 HVSMEa0012H20f Hordeum vulgare seedling shoot EST library HVcDNA0001
(Cold stress) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEa0012H20f, mRNA sequence
Length = 487
Score = 38.2 bits (19), Expect = 0.96
Identities = 31/35 (88%)
Strand = Plus / Plus
Query: 1040 gagctggtgaaccacccggagatccagcagaagct 1074
|||||||||||| |||||| |||||| |||||||
Sbjct: 424 gagctggtgaacaacccggccatccaggagaagct 458
>gb|BF624448.2|BF624448 HVSMEa0016F02f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0016F02f, mRNA sequence
Length = 765
Score = 38.2 bits (19), Expect = 0.96
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 176 ctgcctcccggccccgtcc 194
|||||||||||||||||||
Sbjct: 105 ctgcctcccggccccgtcc 87
>gb|BI950331.1|BI950331 HVSMEl0020E12f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0020E12f, mRNA sequence
Length = 985
Score = 38.2 bits (19), Expect = 0.96
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 443 tacggcgaccactggcgcaagatgcgc 469
|||||||||||||||||| | ||||||
Sbjct: 244 tacggcgaccactggcgccacatgcgc 270
>gb|BI958886.1|BI958886 HVSMEn0017A15f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0017A15f, mRNA sequence
Length = 646
Score = 38.2 bits (19), Expect = 0.96
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 176 ctgcctcccggccccgtcc 194
|||||||||||||||||||
Sbjct: 349 ctgcctcccggccccgtcc 331
>gb|BQ466722.1|BQ466722 HS01G02T HS Hordeum vulgare subsp. vulgare cDNA clone HS01G02
5-PRIME, mRNA sequence
Length = 616
Score = 38.2 bits (19), Expect = 0.96
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 176 ctgcctcccggccccgtcc 194
|||||||||||||||||||
Sbjct: 314 ctgcctcccggccccgtcc 296
>gb|BQ467038.1|BQ467038 HS02G02r HS Hordeum vulgare subsp. vulgare cDNA clone HS02G02
5-PRIME, mRNA sequence
Length = 363
Score = 38.2 bits (19), Expect = 0.96
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 176 ctgcctcccggccccgtcc 194
|||||||||||||||||||
Sbjct: 314 ctgcctcccggccccgtcc 296
>gb|BQ469122.1|BQ469122 HM03H10r HM Hordeum vulgare subsp. vulgare cDNA clone HM03H10
5-PRIME, mRNA sequence
Length = 434
Score = 38.2 bits (19), Expect = 0.96
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 358 gcagggcgtggagttcggc 376
|||||||||||||||||||
Sbjct: 186 gcagggcgtggagttcggc 168
>gb|BM372507.2|BM372507 EBpi05_SQ003_C15_R pistil, 8 DPA, no treatment, cv Optic, EBpi05
Hordeum vulgare subsp. vulgare cDNA clone
EBpi05_SQ003_C15 5', mRNA sequence
Length = 513
Score = 38.2 bits (19), Expect = 0.96
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 176 ctgcctcccggccccgtcc 194
|||||||||||||||||||
Sbjct: 407 ctgcctcccggccccgtcc 389
>gb|BQ757875.1|BQ757875 EBem10_SQ005_I01_R embryo, 2 Day germination, no treatment, cv
Optic, EBem10 Hordeum vulgare subsp. vulgare cDNA clone
EBem10_SQ005_I01 5', mRNA sequence
Length = 271
Score = 38.2 bits (19), Expect = 0.96
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 176 ctgcctcccggccccgtcc 194
|||||||||||||||||||
Sbjct: 206 ctgcctcccggccccgtcc 188
>gb|BQ766181.1|BQ766181 EBro08_SQ005_C10_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ005_C10 5', mRNA sequence
Length = 411
Score = 38.2 bits (19), Expect = 0.96
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 176 ctgcctcccggccccgtcc 194
|||||||||||||||||||
Sbjct: 305 ctgcctcccggccccgtcc 287
>gb|BU995376.1|BU995376 HM10B01r HM Hordeum vulgare subsp. vulgare cDNA clone HM10B01
5-PRIME, mRNA sequence
Length = 602
Score = 38.2 bits (19), Expect = 0.96
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 533 gccgaggccgccgccgtcg 551
|||||||||||||||||||
Sbjct: 222 gccgaggccgccgccgtcg 240
>gb|BU999284.1|BU999284 HI14A18r HI Hordeum vulgare subsp. vulgare cDNA clone HI14A18
5-PRIME, mRNA sequence
Length = 493
Score = 38.2 bits (19), Expect = 0.96
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1080 aggagctggacacggtgct 1098
|||||||||||||||||||
Sbjct: 474 aggagctggacacggtgct 492
>gb|CA013705.1|CA013705 HT09E03r HT Hordeum vulgare subsp. vulgare cDNA clone HT09E03
5-PRIME, mRNA sequence
Length = 609
Score = 38.2 bits (19), Expect = 0.96
Identities = 34/39 (87%)
Strand = Plus / Plus
Query: 1390 cctgcccttcggcgtcggccgcaggagctgccccgggat 1428
|||||| ||||||| ||||||||||| ||||| |||||
Sbjct: 439 cctgccgttcggcgccggccgcaggatgtgccctgggat 477
>gb|CA024561.1|CA024561 HZ49K12r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ49K12
5-PRIME, mRNA sequence
Length = 499
Score = 38.2 bits (19), Expect = 0.96
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 533 gccgaggccgccgccgtcg 551
|||||||||||||||||||
Sbjct: 323 gccgaggccgccgccgtcg 341
>gb|CB881502.1|CB881502 HM10A02w HM Hordeum vulgare subsp. vulgare cDNA clone HM10A02
3-PRIME, mRNA sequence
Length = 630
Score = 38.2 bits (19), Expect = 0.96
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 533 gccgaggccgccgccgtcg 551
|||||||||||||||||||
Sbjct: 491 gccgaggccgccgccgtcg 473
>gb|CV056550.1|CV056550 BNEL19A6 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL19A6 5' similar to Oryza sativa,
mRNA sequence
Length = 401
Score = 38.2 bits (19), Expect = 0.96
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 176 ctgcctcccggccccgtcc 194
|||||||||||||||||||
Sbjct: 295 ctgcctcccggccccgtcc 277
>gb|CV057739.1|CV057739 BNEL30c4 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL30c4 5' similar to Oryza sativa,
mRNA sequence
Length = 362
Score = 38.2 bits (19), Expect = 0.96
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 176 ctgcctcccggccccgtcc 194
|||||||||||||||||||
Sbjct: 256 ctgcctcccggccccgtcc 238
>gb|CV058816.1|CV058816 BNEL41c3 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL41c3 5' similar to Oryza sativa,
mRNA sequence
Length = 399
Score = 38.2 bits (19), Expect = 0.96
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 176 ctgcctcccggccccgtcc 194
|||||||||||||||||||
Sbjct: 293 ctgcctcccggccccgtcc 275
>gb|CV060011.1|CV060011 BNEL53d6 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL53d6 5' similar to Oryza sativa,
mRNA sequence
Length = 362
Score = 38.2 bits (19), Expect = 0.96
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 176 ctgcctcccggccccgtcc 194
|||||||||||||||||||
Sbjct: 256 ctgcctcccggccccgtcc 238
>gb|CV061136.1|CV061136 BNEL65d1 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL65d1 5' similar to Oryza sativa,
mRNA sequence
Length = 401
Score = 38.2 bits (19), Expect = 0.96
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 176 ctgcctcccggccccgtcc 194
|||||||||||||||||||
Sbjct: 293 ctgcctcccggccccgtcc 275
>gb|CV062631.1|CV062631 BNEL81b6 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL81b6 5' similar to Oryza sativa,
mRNA sequence
Length = 399
Score = 38.2 bits (19), Expect = 0.96
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 176 ctgcctcccggccccgtcc 194
|||||||||||||||||||
Sbjct: 293 ctgcctcccggccccgtcc 275
>gb|CV062934.1|CV062934 BNEL84g2 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL84g2 5' similar to Oryza sativa,
mRNA sequence
Length = 399
Score = 38.2 bits (19), Expect = 0.96
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 176 ctgcctcccggccccgtcc 194
|||||||||||||||||||
Sbjct: 293 ctgcctcccggccccgtcc 275
>gb|CV063668.1|CV063668 BNEL91h2 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL91h2 5' similar to Oryza sativa,
mRNA sequence
Length = 362
Score = 38.2 bits (19), Expect = 0.96
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 176 ctgcctcccggccccgtcc 194
|||||||||||||||||||
Sbjct: 256 ctgcctcccggccccgtcc 238
>gb|CV063771.1|CV063771 BNEL93a12 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL93a12 5' similar to Oryza sativa,
mRNA sequence
Length = 399
Score = 38.2 bits (19), Expect = 0.96
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 176 ctgcctcccggccccgtcc 194
|||||||||||||||||||
Sbjct: 293 ctgcctcccggccccgtcc 275
>gb|CX662506.1|CX662506 EST 322 Expressed sequences from Barley Hordeum vulgare subsp.
vulgare cDNA clone P322 5', mRNA sequence
Length = 513
Score = 38.2 bits (19), Expect = 0.96
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 533 gccgaggccgccgccgtcg 551
|||||||||||||||||||
Sbjct: 89 gccgaggccgccgccgtcg 107
>gb|CX662646.1|CX662646 EST 477 Expressed sequences from Barley Hordeum vulgare subsp.
vulgare cDNA clone P477 5', mRNA sequence
Length = 513
Score = 38.2 bits (19), Expect = 0.96
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 533 gccgaggccgccgccgtcg 551
|||||||||||||||||||
Sbjct: 89 gccgaggccgccgccgtcg 107
>gb|BE420881.1|BE420881 HWM003.E06 ITEC HWM Barley Leaf Library Hordeum vulgare subsp.
vulgare cDNA clone HWM003.E06, mRNA sequence
Length = 935
Score = 36.2 bits (18), Expect = 3.8
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 1160 atcaaggagacgctgcggctgc 1181
||||||||||||| ||||||||
Sbjct: 108 atcaaggagacgcagcggctgc 129
>gb|AL503840.1|AL503840 AL503840 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW03J12T 5', mRNA sequence
Length = 700
Score = 36.2 bits (18), Expect = 3.8
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 1160 atcaaggagacgctgcggctgc 1181
||||||||||||| ||||||||
Sbjct: 145 atcaaggagacgcagcggctgc 166
>gb|AL505436.1|AL505436 AL505436 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW08H13V 5', mRNA sequence
Length = 156
Score = 36.2 bits (18), Expect = 3.8
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 1081 ggagctggacacggtgct 1098
||||||||||||||||||
Sbjct: 31 ggagctggacacggtgct 48
>gb|AL506253.1|AL506253 AL506253 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY02I12T 5',
mRNA sequence
Length = 680
Score = 36.2 bits (18), Expect = 3.8
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 541 cgccgccgtcgtcgacga 558
||||||||||||||||||
Sbjct: 491 cgccgccgtcgtcgacga 474
>gb|AL507734.1|AL507734 AL507734 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY06L07V 5',
mRNA sequence
Length = 687
Score = 36.2 bits (18), Expect = 3.8
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 541 cgccgccgtcgtcgacga 558
||||||||||||||||||
Sbjct: 366 cgccgccgtcgtcgacga 349
>gb|AL508202.1|AL508202 AL508202 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY08B05V 5',
mRNA sequence
Length = 627
Score = 36.2 bits (18), Expect = 3.8
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 541 cgccgccgtcgtcgacga 558
||||||||||||||||||
Sbjct: 454 cgccgccgtcgtcgacga 437
>gb|AL508453.1|AL508453 AL508453 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY08N01V 5',
mRNA sequence
Length = 692
Score = 36.2 bits (18), Expect = 3.8
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 541 cgccgccgtcgtcgacga 558
||||||||||||||||||
Sbjct: 29 cgccgccgtcgtcgacga 12
>gb|AL508633.1|AL508633 AL508633 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY09F14V 5',
mRNA sequence
Length = 494
Score = 36.2 bits (18), Expect = 3.8
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 541 cgccgccgtcgtcgacga 558
||||||||||||||||||
Sbjct: 127 cgccgccgtcgtcgacga 110
>gb|AL509055.1|AL509055 AL509055 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY10J09V 5',
mRNA sequence
Length = 562
Score = 36.2 bits (18), Expect = 3.8
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 541 cgccgccgtcgtcgacga 558
||||||||||||||||||
Sbjct: 398 cgccgccgtcgtcgacga 381
>gb|AV836496.1|AV836496 AV836496 K. Sato unpublished cDNA library: Hordeum vulgare subsp.
vulgare seedling leaves second leaf stage Hordeum vulgare
subsp. vulgare cDNA clone basd22b21, mRNA sequence
Length = 521
Score = 36.2 bits (18), Expect = 3.8
Identities = 24/26 (92%)
Strand = Plus / Plus
Query: 1156 ggtgatcaaggagacgctgcggctgc 1181
|||| ||||||||||||| |||||||
Sbjct: 439 ggtggtcaaggagacgctccggctgc 464
>gb|BF626485.1|BF626485 HVSMEa0018I13f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0018I13f, mRNA sequence
Length = 925
Score = 36.2 bits (18), Expect = 3.8
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 541 cgccgccgtcgtcgacga 558
||||||||||||||||||
Sbjct: 474 cgccgccgtcgtcgacga 457
>gb|BF621409.2|BF621409 HVSMEa0006N07f Hordeum vulgare seedling shoot EST library HVcDNA0001
(Cold stress) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEa0006N07f, mRNA sequence
Length = 817
Score = 36.2 bits (18), Expect = 3.8
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 1160 atcaaggagacgctgcggctgc 1181
||||||||||||| ||||||||
Sbjct: 128 atcaaggagacgcagcggctgc 149
>gb|BF628457.2|BF628457 HVSMEb0006C02f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0006C02f, mRNA sequence
Length = 696
Score = 36.2 bits (18), Expect = 3.8
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 541 cgccgccgtcgtcgacga 558
||||||||||||||||||
Sbjct: 465 cgccgccgtcgtcgacga 448
>gb|BF628613.2|BF628613 HVSMEb0006L24f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0006L24f, mRNA sequence
Length = 713
Score = 36.2 bits (18), Expect = 3.8
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 541 cgccgccgtcgtcgacga 558
||||||||||||||||||
Sbjct: 494 cgccgccgtcgtcgacga 477
>gb|BF630524.2|BF630524 HVSMEb0011C23f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0011C23f, mRNA sequence
Length = 735
Score = 36.2 bits (18), Expect = 3.8
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 541 cgccgccgtcgtcgacga 558
||||||||||||||||||
Sbjct: 254 cgccgccgtcgtcgacga 237
>gb|BG300444.1|BG300444 HVSMEb0017B10f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0017B10f, mRNA sequence
Length = 880
Score = 36.2 bits (18), Expect = 3.8
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 177 tgcctcccggccccgtcc 194
||||||||||||||||||
Sbjct: 295 tgcctcccggccccgtcc 278
>gb|BG301294.1|BG301294 HVSMEb0020I14f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0020I14f, mRNA sequence
Length = 900
Score = 36.2 bits (18), Expect = 3.8
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 327 cgccgccgctggcgcggg 344
||||||||||||||||||
Sbjct: 160 cgccgccgctggcgcggg 177
>gb|BF619362.2|BF619362 HVSMEc0016M03f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0016M03f, mRNA sequence
Length = 834
Score = 36.2 bits (18), Expect = 3.8
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 541 cgccgccgtcgtcgacga 558
||||||||||||||||||
Sbjct: 491 cgccgccgtcgtcgacga 474
>gb|BF257111.2|BF257111 HVSMEf0011O06f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0011O06f, mRNA sequence
Length = 538
Score = 36.2 bits (18), Expect = 3.8
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 541 cgccgccgtcgtcgacga 558
||||||||||||||||||
Sbjct: 462 cgccgccgtcgtcgacga 445
>gb|BF259886.2|BF259886 HVSMEf0020I13f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0020I13f, mRNA sequence
Length = 535
Score = 36.2 bits (18), Expect = 3.8
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 541 cgccgccgtcgtcgacga 558
||||||||||||||||||
Sbjct: 436 cgccgccgtcgtcgacga 419
>gb|BF260474.2|BF260474 HVSMEf0022B13f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0022B13f, mRNA sequence
Length = 796
Score = 36.2 bits (18), Expect = 3.8
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 541 cgccgccgtcgtcgacga 558
||||||||||||||||||
Sbjct: 411 cgccgccgtcgtcgacga 394
>gb|BF260932.2|BF260932 HVSMEf0023F04f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0023F04f, mRNA sequence
Length = 810
Score = 36.2 bits (18), Expect = 3.8
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 541 cgccgccgtcgtcgacga 558
||||||||||||||||||
Sbjct: 201 cgccgccgtcgtcgacga 184
>gb|BG365474.1|BG365474 HVSMEi0002N11f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0002N11f, mRNA sequence
Length = 830
Score = 36.2 bits (18), Expect = 3.8
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 1160 atcaaggagacgctgcggctgc 1181
||||||||||||| ||||||||
Sbjct: 127 atcaaggagacgcagcggctgc 148
>gb|BG367699.1|BG367699 HVSMEi0013F02f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0013F02f, mRNA sequence
Length = 540
Score = 36.2 bits (18), Expect = 3.8
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 533 gccgaggccgccgccgtcgtcg 554
||||| ||||||||||||||||
Sbjct: 71 gccgacgccgccgccgtcgtcg 92
>gb|BI947428.1|BI947428 HVSMEl0005H09f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0005H09f, mRNA sequence
Length = 486
Score = 36.2 bits (18), Expect = 3.8
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 541 cgccgccgtcgtcgacga 558
||||||||||||||||||
Sbjct: 300 cgccgccgtcgtcgacga 283
>gb|BI952340.1|BI952340 HVSMEm0006A01f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0006A01f, mRNA sequence
Length = 895
Score = 36.2 bits (18), Expect = 3.8
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 541 cgccgccgtcgtcgacga 558
||||||||||||||||||
Sbjct: 243 cgccgccgtcgtcgacga 226
>gb|BI952693.1|BI952693 HVSMEm0007G18f Hordeum vulgare green seedling EST library HVcDNA0014
(Blumeria infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEm0007G18f, mRNA sequence
Length = 426
Score = 36.2 bits (18), Expect = 3.8
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 1160 atcaaggagacgctgcggctgc 1181
|||||||||||||| |||||||
Sbjct: 277 atcaaggagacgctccggctgc 298
>gb|BI956465.1|BI956465 HVSMEn0003I13f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0003I13f, mRNA sequence
Length = 452
Score = 36.2 bits (18), Expect = 3.8
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 541 cgccgccgtcgtcgacga 558
||||||||||||||||||
Sbjct: 213 cgccgccgtcgtcgacga 196
>gb|BI956467.1|BI956467 HVSMEn0003I17f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0003I17f, mRNA sequence
Length = 452
Score = 36.2 bits (18), Expect = 3.8
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 541 cgccgccgtcgtcgacga 558
||||||||||||||||||
Sbjct: 213 cgccgccgtcgtcgacga 196
>gb|BI956830.1|BI956830 HVSMEn0005I22f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0005I22f, mRNA sequence
Length = 812
Score = 36.2 bits (18), Expect = 3.8
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 541 cgccgccgtcgtcgacga 558
||||||||||||||||||
Sbjct: 284 cgccgccgtcgtcgacga 267
>gb|BI957225.1|BI957225 HVSMEn0008D16f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0008D16f,
mRNA sequence
Length = 622
Score = 36.2 bits (18), Expect = 3.8
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 1135 caacctcccctacctgca 1152
||||||||||||||||||
Sbjct: 336 caacctcccctacctgca 353
>gb|BI957719.1|BI957719 HVSMEn0010N19f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0010N19f, mRNA sequence
Length = 659
Score = 36.2 bits (18), Expect = 3.8
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 541 cgccgccgtcgtcgacga 558
||||||||||||||||||
Sbjct: 491 cgccgccgtcgtcgacga 474
>gb|BE215637.1|BE215637 HV_CEb0007H18f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0007H18f, mRNA sequence
Length = 531
Score = 36.2 bits (18), Expect = 3.8
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 1160 atcaaggagacgctgcggctgc 1181
|||||||||||||| |||||||
Sbjct: 237 atcaaggagacgctccggctgc 258
>gb|BF263626.2|BF263626 HV_CEa0007D21f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0007D21f, mRNA sequence
Length = 591
Score = 36.2 bits (18), Expect = 3.8
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 541 cgccgccgtcgtcgacga 558
||||||||||||||||||
Sbjct: 470 cgccgccgtcgtcgacga 453
>gb|BF266096.2|BF266096 HV_CEa0014C18f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0014C18f, mRNA sequence
Length = 547
Score = 36.2 bits (18), Expect = 3.8
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 541 cgccgccgtcgtcgacga 558
||||||||||||||||||
Sbjct: 488 cgccgccgtcgtcgacga 471
>gb|BE214196.2|BE214196 HV_CEb0002J22f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0002J22f, mRNA sequence
Length = 906
Score = 36.2 bits (18), Expect = 3.8
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 541 cgccgccgtcgtcgacga 558
||||||||||||||||||
Sbjct: 475 cgccgccgtcgtcgacga 458
>gb|BE214494.2|BE214494 HV_CEb0003J23f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0003J23f, mRNA sequence
Length = 696
Score = 36.2 bits (18), Expect = 3.8
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 541 cgccgccgtcgtcgacga 558
||||||||||||||||||
Sbjct: 471 cgccgccgtcgtcgacga 454
>gb|BF065493.2|BF065493 HV_CEb0012J10f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0012J10f, mRNA sequence
Length = 550
Score = 36.2 bits (18), Expect = 3.8
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 541 cgccgccgtcgtcgacga 558
||||||||||||||||||
Sbjct: 465 cgccgccgtcgtcgacga 448
>gb|BF064659.2|BF064659 HV_CEb0016M09f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0016M09f, mRNA sequence
Length = 589
Score = 36.2 bits (18), Expect = 3.8
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 541 cgccgccgtcgtcgacga 558
||||||||||||||||||
Sbjct: 137 cgccgccgtcgtcgacga 120
>gb|BF064992.2|BF064992 HV_CEb0022F17f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0022F17f, mRNA sequence
Length = 821
Score = 36.2 bits (18), Expect = 3.8
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 541 cgccgccgtcgtcgacga 558
||||||||||||||||||
Sbjct: 488 cgccgccgtcgtcgacga 471
>gb|BG415278.1|BG415278 HVSMEk0005N09f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0005N09f, mRNA sequence
Length = 670
Score = 36.2 bits (18), Expect = 3.8
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 541 cgccgccgtcgtcgacga 558
||||||||||||||||||
Sbjct: 190 cgccgccgtcgtcgacga 173
>gb|BI958548.1|BI958548 HVSMEn0015I15f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0015I15f, mRNA sequence
Length = 640
Score = 36.2 bits (18), Expect = 3.8
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 541 cgccgccgtcgtcgacga 558
||||||||||||||||||
Sbjct: 491 cgccgccgtcgtcgacga 474
>gb|BI958586.1|BI958586 HVSMEn0015M05f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0015M05f, mRNA sequence
Length = 618
Score = 36.2 bits (18), Expect = 3.8
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 541 cgccgccgtcgtcgacga 558
||||||||||||||||||
Sbjct: 472 cgccgccgtcgtcgacga 455
>gb|BI958616.1|BI958616 HVSMEn0015O17f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0015O17f, mRNA sequence
Length = 658
Score = 36.2 bits (18), Expect = 3.8
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 541 cgccgccgtcgtcgacga 558
||||||||||||||||||
Sbjct: 470 cgccgccgtcgtcgacga 453
>gb|BI959036.1|BI959036 HVSMEn0017N09f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0017N09f, mRNA sequence
Length = 682
Score = 36.2 bits (18), Expect = 3.8
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 541 cgccgccgtcgtcgacga 558
||||||||||||||||||
Sbjct: 487 cgccgccgtcgtcgacga 470
>gb|BI959573.1|BI959573 HVSMEn0020E05f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0020E05f,
mRNA sequence
Length = 648
Score = 36.2 bits (18), Expect = 3.8
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 1483 cgagctgctgccgccgcc 1500
||||||||||||||||||
Sbjct: 420 cgagctgctgccgccgcc 403
>gb|BI960275.1|BI960275 HVSMEn0024B01f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0024B01f, mRNA sequence
Length = 655
Score = 36.2 bits (18), Expect = 3.8
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 541 cgccgccgtcgtcgacga 558
||||||||||||||||||
Sbjct: 87 cgccgccgtcgtcgacga 70
>gb|BI960280.1|BI960280 HVSMEn0024B08f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0024B08f, mRNA sequence
Length = 623
Score = 36.2 bits (18), Expect = 3.8
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 541 cgccgccgtcgtcgacga 558
||||||||||||||||||
Sbjct: 406 cgccgccgtcgtcgacga 389
>gb|BI960505.1|BI960505 HVSMEn0024N09f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0024N09f, mRNA sequence
Length = 659
Score = 36.2 bits (18), Expect = 3.8
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 541 cgccgccgtcgtcgacga 558
||||||||||||||||||
Sbjct: 486 cgccgccgtcgtcgacga 469
>gb|BF628196.3|BF628196 HVSMEb0003G07f Hordeum vulgare seedling shoot EST library HVcDNA0002
(Dehydration stress) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEb0003G07f, mRNA sequence
Length = 492
Score = 36.2 bits (18), Expect = 3.8
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 1160 atcaaggagacgctgcggctgc 1181
||||||||||||| ||||||||
Sbjct: 120 atcaaggagacgcagcggctgc 141
>gb|BF631213.3|BF631213 HVSMEb0015E18f Hordeum vulgare seedling shoot EST library HVcDNA0002
(Dehydration stress) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEb0015E18f, mRNA sequence
Length = 733
Score = 36.2 bits (18), Expect = 3.8
Identities = 21/22 (95%)
Strand = Plus / Minus
Query: 1390 cctgcccttcggcgtcggccgc 1411
||||||||||||||| ||||||
Sbjct: 416 cctgcccttcggcgtgggccgc 395
>gb|BF253827.3|BF253827 HVSMEf0002D18f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0002D18f, mRNA sequence
Length = 867
Score = 36.2 bits (18), Expect = 3.8
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 541 cgccgccgtcgtcgacga 558
||||||||||||||||||
Sbjct: 450 cgccgccgtcgtcgacga 433
>gb|AW982410.3|AW982410 HVSMEg0003D04f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0003D04f, mRNA sequence
Length = 564
Score = 36.2 bits (18), Expect = 3.8
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 541 cgccgccgtcgtcgacga 558
||||||||||||||||||
Sbjct: 442 cgccgccgtcgtcgacga 425
>gb|BG344019.2|BG344019 HVSMEg0007G14f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0007G14f, mRNA sequence
Length = 836
Score = 36.2 bits (18), Expect = 3.8
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 541 cgccgccgtcgtcgacga 558
||||||||||||||||||
Sbjct: 349 cgccgccgtcgtcgacga 332
>gb|AW983540.3|AW983540 HVSMEg0010P19f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0010P19f, mRNA sequence
Length = 838
Score = 36.2 bits (18), Expect = 3.8
Identities = 21/22 (95%)
Strand = Plus / Minus
Query: 538 ggccgccgccgtcgtcgacgac 559
|||||||||||||| |||||||
Sbjct: 356 ggccgccgccgtcggcgacgac 335
>gb|BE195199.3|BE195199 HVSMEh0088J02f Hordeum vulgare 5-45 DAP spike EST library HVcDNA0009
(5 to 45 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEh0088J02f, mRNA sequence
Length = 624
Score = 36.2 bits (18), Expect = 3.8
Identities = 24/26 (92%)
Strand = Plus / Plus
Query: 1390 cctgcccttcggcgtcggccgcagga 1415
|||||| ||||||| |||||||||||
Sbjct: 364 cctgccgttcggcgccggccgcagga 389
>gb|BE195300.3|BE195300 HVSMEh0088N14f Hordeum vulgare 5-45 DAP spike EST library HVcDNA0009
(5 to 45 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEh0088N14f, mRNA sequence
Length = 624
Score = 36.2 bits (18), Expect = 3.8
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 1160 atcaaggagacgctgcggctgc 1181
||||||||||||| ||||||||
Sbjct: 69 atcaaggagacgcagcggctgc 90
>gb|AV913934.1|AV913934 AV913934 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags23m23 5', mRNA sequence
Length = 660
Score = 36.2 bits (18), Expect = 3.8
Identities = 33/38 (86%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggct 1179
|||||||| |||| |||||||||||||| || |||||
Sbjct: 161 ccctacctaaaggcagtgatcaaggagacactccggct 198
>gb|AV914567.1|AV914567 AV914567 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags6p16 5', mRNA sequence
Length = 618
Score = 36.2 bits (18), Expect = 3.8
Identities = 33/38 (86%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggct 1179
|||||||| |||| |||||||||||||| || |||||
Sbjct: 340 ccctacctaaaggcagtgatcaaggagacactccggct 377
>gb|AV916927.1|AV916927 AV916927 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20c01 5', mRNA sequence
Length = 533
Score = 36.2 bits (18), Expect = 3.8
Identities = 33/38 (86%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggct 1179
|||||||| |||| |||||||||||||| || |||||
Sbjct: 175 ccctacctaaaggcagtgatcaaggagacactccggct 212
>gb|AV917238.1|AV917238 AV917238 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags18b09 5', mRNA sequence
Length = 615
Score = 36.2 bits (18), Expect = 3.8
Identities = 33/38 (86%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggct 1179
|||||||| |||| |||||||||||||| || |||||
Sbjct: 469 ccctacctaaaggcagtgatcaaggagacactccggct 506
>gb|AV918176.1|AV918176 AV918176 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20c01 3', mRNA sequence
Length = 655
Score = 36.2 bits (18), Expect = 3.8
Identities = 33/38 (86%)
Strand = Plus / Minus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggct 1179
|||||||| |||| |||||||||||||| || |||||
Sbjct: 576 ccctacctaaaggcagtgatcaaggagacactccggct 539
>gb|AV918301.1|AV918301 AV918301 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20j07 3', mRNA sequence
Length = 660
Score = 36.2 bits (18), Expect = 3.8
Identities = 33/38 (86%)
Strand = Plus / Minus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggct 1179
|||||||| |||| |||||||||||||| || |||||
Sbjct: 541 ccctacctaaaggcagtgatcaaggagacactccggct 504
>gb|AV919647.1|AV919647 AV919647 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags6p16 3', mRNA sequence
Length = 703
Score = 36.2 bits (18), Expect = 3.8
Identities = 33/38 (86%)
Strand = Plus / Minus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggct 1179
|||||||| |||| |||||||||||||| || |||||
Sbjct: 558 ccctacctaaaggcagtgatcaaggagacactccggct 521
>gb|AV922405.1|AV922405 AV922405 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags18b09 3', mRNA sequence
Length = 618
Score = 36.2 bits (18), Expect = 3.8
Identities = 33/38 (86%)
Strand = Plus / Minus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggct 1179
|||||||| |||| |||||||||||||| || |||||
Sbjct: 577 ccctacctaaaggcagtgatcaaggagacactccggct 540
>gb|BM816347.1|BM816347 HC02H08_T3.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC02H08_T3.ab1 similar to
Adenosylhomocysteinase,Phenylalanine
4-monooxygenase,4-alpha-glucanotransferase,, mRNA
sequence
Length = 793
Score = 36.2 bits (18), Expect = 3.8
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 541 cgccgccgtcgtcgacga 558
||||||||||||||||||
Sbjct: 209 cgccgccgtcgtcgacga 192
>gb|BJ446926.1|BJ446926 BJ446926 K. Sato unpublished cDNA library, cv. Akashinriki vegetative
stage leaves Hordeum vulgare subsp. vulgare cDNA clone
baak15g01 5', mRNA sequence
Length = 623
Score = 36.2 bits (18), Expect = 3.8
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 1160 atcaaggagacgctgcggctgc 1181
||||||||||||| ||||||||
Sbjct: 66 atcaaggagacgcagcggctgc 87
>gb|BJ451497.1|BJ451497 BJ451497 K. Sato unpublished cDNA library, cv. Akashinriki vegetative
stage leaves Hordeum vulgare subsp. vulgare cDNA clone
baak34d14 5', mRNA sequence
Length = 679
Score = 36.2 bits (18), Expect = 3.8
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 1160 atcaaggagacgctgcggctgc 1181
||||||||||||| ||||||||
Sbjct: 152 atcaaggagacgcagcggctgc 173
>gb|BJ452393.1|BJ452393 BJ452393 K. Sato unpublished cDNA library, cv. Akashinriki vegetative
stage leaves Hordeum vulgare subsp. vulgare cDNA clone
baak38n17 5', mRNA sequence
Length = 694
Score = 36.2 bits (18), Expect = 3.8
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 1160 atcaaggagacgctgcggctgc 1181
||||||||||||| ||||||||
Sbjct: 55 atcaaggagacgcagcggctgc 76
>gb|BJ459941.1|BJ459941 BJ459941 K. Sato unpublished cDNA library, cv. Akashinriki vegetative
stage leaves Hordeum vulgare subsp. vulgare cDNA clone
baak38n17 3', mRNA sequence
Length = 677
Score = 36.2 bits (18), Expect = 3.8
Identities = 21/22 (95%)
Strand = Plus / Minus
Query: 1160 atcaaggagacgctgcggctgc 1181
||||||||||||| ||||||||
Sbjct: 673 atcaaggagacgcagcggctgc 652
>gb|BJ464184.1|BJ464184 BJ464184 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags33d19 5', mRNA sequence
Length = 597
Score = 36.2 bits (18), Expect = 3.8
Identities = 33/38 (86%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggct 1179
|||||||| |||| |||||||||||||| || |||||
Sbjct: 376 ccctacctaaaggcagtgatcaaggagacactccggct 413
>gb|BJ464493.1|BJ464493 BJ464493 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags34j09 5', mRNA sequence
Length = 523
Score = 36.2 bits (18), Expect = 3.8
Identities = 33/38 (86%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggct 1179
|||||||| |||| |||||||||||||| || |||||
Sbjct: 376 ccctacctaaaggcagtgatcaaggagacactccggct 413
>gb|BJ466861.1|BJ466861 BJ466861 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags34j09 3', mRNA sequence
Length = 719
Score = 36.2 bits (18), Expect = 3.8
Identities = 33/38 (86%)
Strand = Plus / Minus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggct 1179
|||||||| |||| |||||||||||||| || |||||
Sbjct: 540 ccctacctaaaggcagtgatcaaggagacactccggct 503
>gb|BJ471507.1|BJ471507 BJ471507 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal18p14 5', mRNA sequence
Length = 341
Score = 36.2 bits (18), Expect = 3.8
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 1160 atcaaggagacgctgcggctgc 1181
|||||||||||||| |||||||
Sbjct: 178 atcaaggagacgctccggctgc 199
>gb|BQ463026.1|BQ463026 HI02M20r HI Hordeum vulgare subsp. vulgare cDNA clone HI02M20
5-PRIME, mRNA sequence
Length = 558
Score = 36.2 bits (18), Expect = 3.8
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 530 gaggccgaggccgccgcc 547
||||||||||||||||||
Sbjct: 301 gaggccgaggccgccgcc 318
>gb|BQ470170.1|BQ470170 HX01P18T HX Hordeum vulgare subsp. vulgare cDNA clone HX01P18
5-PRIME, mRNA sequence
Length = 593
Score = 36.2 bits (18), Expect = 3.8
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 541 cgccgccgtcgtcgacga 558
||||||||||||||||||
Sbjct: 502 cgccgccgtcgtcgacga 485
>gb|BQ470210.1|BQ470210 HX02C07r HX Hordeum vulgare subsp. vulgare cDNA clone HX02C07
5-PRIME, mRNA sequence
Length = 548
Score = 36.2 bits (18), Expect = 3.8
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 541 cgccgccgtcgtcgacga 558
||||||||||||||||||
Sbjct: 479 cgccgccgtcgtcgacga 462
>gb|BM097634.2|BM097634 EBem04_SQ002_E10_R embryo, 12 DPA, no treatment, cv Optic, EBem04
Hordeum vulgare subsp. vulgare cDNA clone
EBem04_SQ002_E10 5', mRNA sequence
Length = 508
Score = 36.2 bits (18), Expect = 3.8
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 331 gccgctggcgcgggaggt 348
||||||||||||||||||
Sbjct: 32 gccgctggcgcgggaggt 15
>gb|BM375802.2|BM375802 EBem06_SQ004_H08_R embryo, 21 DPA, no treatment, cv Optic, EBem06
Hordeum vulgare subsp. vulgare cDNA clone
EBem06_SQ004_H08 5', mRNA sequence
Length = 591
Score = 36.2 bits (18), Expect = 3.8
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 1160 atcaaggagacgctgcggctgc 1181
||||||||||||| ||||||||
Sbjct: 123 atcaaggagacgcagcggctgc 144
>gb|BM376330.2|BM376330 EBma01_SQ003_D14_R maternal, 4 DPA, no treatment, cv Optic, EBma01
Hordeum vulgare subsp. vulgare cDNA clone
EBma01_SQ003_D14 5', mRNA sequence
Length = 238
Score = 36.2 bits (18), Expect = 3.8
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 1160 atcaaggagacgctgcggctgc 1181
||||||||||||| ||||||||
Sbjct: 127 atcaaggagacgcagcggctgc 148
>gb|BI780033.2|BI780033 EBma08_SQ001_D13_R maternal, 28 DPA, no treatment, cv Optic, EBma08
Hordeum vulgare subsp. vulgare cDNA clone
EBma08_SQ001_D13 5', mRNA sequence
Length = 610
Score = 36.2 bits (18), Expect = 3.8
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 1160 atcaaggagacgctgcggctgc 1181
||||||||||||| ||||||||
Sbjct: 142 atcaaggagacgcagcggctgc 163
>gb|BQ753629.1|BQ753629 EBan01_SQ004_M19_R anther, yellow stage, no treatment, cv Optic,
EBan01 Hordeum vulgare subsp. vulgare cDNA clone
EBan01_SQ004_M19 5', mRNA sequence
Length = 367
Score = 36.2 bits (18), Expect = 3.8
Identities = 24/26 (92%)
Strand = Plus / Plus
Query: 540 ccgccgccgtcgtcgacgacgtgcgc 565
||||||||||||||| ||| ||||||
Sbjct: 339 ccgccgccgtcgtcgtcgaggtgcgc 364
>gb|BQ758193.1|BQ758193 EBma01_SQ003_M17_R maternal, 4 DPA, no treatment, cv Optic, EBma01
Hordeum vulgare subsp. vulgare cDNA clone
EBma01_SQ003_M17 5', mRNA sequence
Length = 107
Score = 36.2 bits (18), Expect = 3.8
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 1160 atcaaggagacgctgcggctgc 1181
||||||||||||| ||||||||
Sbjct: 57 atcaaggagacgcagcggctgc 78
>gb|BQ762997.1|BQ762997 EBro02_SQ006_G19_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ006_G19 5', mRNA sequence
Length = 595
Score = 36.2 bits (18), Expect = 3.8
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 1160 atcaaggagacgctgcggctgc 1181
||||||||||||| ||||||||
Sbjct: 127 atcaaggagacgcagcggctgc 148
>gb|BQ763910.1|BQ763910 EBro03_SQ005_A24_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ005_A24 5', mRNA sequence
Length = 585
Score = 36.2 bits (18), Expect = 3.8
Identities = 24/26 (92%)
Strand = Plus / Plus
Query: 443 tacggcgaccactggcgcaagatgcg 468
||||||||||||||||| |||||||
Sbjct: 280 tacggcgaccactggcggcagatgcg 305
>gb|BQ763974.1|BQ763974 EBro03_SQ005_M24_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ005_M24 5', mRNA sequence
Length = 579
Score = 36.2 bits (18), Expect = 3.8
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 1160 atcaaggagacgctgcggctgc 1181
||||||||||||| ||||||||
Sbjct: 129 atcaaggagacgcagcggctgc 150
>gb|BQ764384.1|BQ764384 EBan01_SQ005_O14_R anther, yellow stage, no treatment, cv Optic,
EBan01 Hordeum vulgare subsp. vulgare cDNA clone
EBan01_SQ005_O14 5', mRNA sequence
Length = 620
Score = 36.2 bits (18), Expect = 3.8
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 1160 atcaaggagacgctgcggctgc 1181
||||||||||||| ||||||||
Sbjct: 66 atcaaggagacgcagcggctgc 87
>gb|BQ767178.1|BQ767178 EBro08_SQ008_N04_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ008_N04 5', mRNA sequence
Length = 661
Score = 36.2 bits (18), Expect = 3.8
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 541 cgccgccgtcgtcgacga 558
||||||||||||||||||
Sbjct: 426 cgccgccgtcgtcgacga 409
>gb|BQ768539.1|BQ768539 EBro08_SQ012_B01_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ012_B01 5', mRNA sequence
Length = 640
Score = 36.2 bits (18), Expect = 3.8
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 541 cgccgccgtcgtcgacga 558
||||||||||||||||||
Sbjct: 192 cgccgccgtcgtcgacga 175
>gb|BQ768596.1|BQ768596 EBro08_SQ012_L01_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ012_L01 5', mRNA sequence
Length = 404
Score = 36.2 bits (18), Expect = 3.8
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 541 cgccgccgtcgtcgacga 558
||||||||||||||||||
Sbjct: 142 cgccgccgtcgtcgacga 125
>gb|BU970263.1|BU970263 HB14C03r BC Hordeum vulgare subsp. vulgare cDNA clone HB14C03
5-PRIME, mRNA sequence
Length = 621
Score = 36.2 bits (18), Expect = 3.8
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 1160 atcaaggagacgctgcggctgc 1181
||||||||||||| ||||||||
Sbjct: 62 atcaaggagacgcagcggctgc 83
>gb|BU971214.1|BU971214 HB16P06r BC Hordeum vulgare subsp. vulgare cDNA clone HB16P06
5-PRIME, mRNA sequence
Length = 412
Score = 36.2 bits (18), Expect = 3.8
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 1160 atcaaggagacgctgcggctgc 1181
||||||||||||| ||||||||
Sbjct: 62 atcaaggagacgcagcggctgc 83
>gb|BU974832.1|BU974832 HB29E01r BC Hordeum vulgare subsp. vulgare cDNA clone HB29E01
5-PRIME, mRNA sequence
Length = 425
Score = 36.2 bits (18), Expect = 3.8
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 1160 atcaaggagacgctgcggctgc 1181
||||||||||||| ||||||||
Sbjct: 44 atcaaggagacgcagcggctgc 65
>gb|BU995800.1|BU995800 HM11G13r HM Hordeum vulgare subsp. vulgare cDNA clone HM11G13
5-PRIME, mRNA sequence
Length = 528
Score = 36.2 bits (18), Expect = 3.8
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 541 cgccgccgtcgtcgacga 558
||||||||||||||||||
Sbjct: 83 cgccgccgtcgtcgacga 66
>gb|BU999310.1|BU999310 HI14C01r HI Hordeum vulgare subsp. vulgare cDNA clone HI14C01
5-PRIME, mRNA sequence
Length = 634
Score = 36.2 bits (18), Expect = 3.8
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 530 gaggccgaggccgccgcc 547
||||||||||||||||||
Sbjct: 344 gaggccgaggccgccgcc 361
>gb|BU999634.1|BU999634 HI15C19r HI Hordeum vulgare subsp. vulgare cDNA clone HI15C19
5-PRIME, mRNA sequence
Length = 518
Score = 36.2 bits (18), Expect = 3.8
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 541 cgccgccgtcgtcgacga 558
||||||||||||||||||
Sbjct: 417 cgccgccgtcgtcgacga 400
>gb|CA017643.1|CA017643 HV05M19r HV Hordeum vulgare subsp. vulgare cDNA clone HV05M19
5-PRIME, mRNA sequence
Length = 329
Score = 36.2 bits (18), Expect = 3.8
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 541 cgccgccgtcgtcgacga 558
||||||||||||||||||
Sbjct: 155 cgccgccgtcgtcgacga 138
>gb|CA018770.1|CA018770 HV09J16r HV Hordeum vulgare subsp. vulgare cDNA clone HV09J16
5-PRIME, mRNA sequence
Length = 377
Score = 36.2 bits (18), Expect = 3.8
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 541 cgccgccgtcgtcgacga 558
||||||||||||||||||
Sbjct: 261 cgccgccgtcgtcgacga 244
>gb|CA018854.1|CA018854 HV09N17r HV Hordeum vulgare subsp. vulgare cDNA clone HV09N17
5-PRIME, mRNA sequence
Length = 567
Score = 36.2 bits (18), Expect = 3.8
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 541 cgccgccgtcgtcgacga 558
||||||||||||||||||
Sbjct: 30 cgccgccgtcgtcgacga 13
>gb|CA019359.1|CA019359 HV11L22r HV Hordeum vulgare subsp. vulgare cDNA clone HV11L22
5-PRIME, mRNA sequence
Length = 449
Score = 36.2 bits (18), Expect = 3.8
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 1160 atcaaggagacgctgcggctgc 1181
||||||||||||| ||||||||
Sbjct: 58 atcaaggagacgcagcggctgc 79
>gb|CA019622.1|CA019622 HV12J09r HV Hordeum vulgare subsp. vulgare cDNA clone HV12J09
5-PRIME, mRNA sequence
Length = 533
Score = 36.2 bits (18), Expect = 3.8
Identities = 33/38 (86%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggct 1179
|||||||| |||| |||||||||||||| || |||||
Sbjct: 484 ccctacctaaaggcagtgatcaaggagacactccggct 521
>gb|CA020085.1|CA020085 HV14E20r HV Hordeum vulgare subsp. vulgare cDNA clone HV14E20
5-PRIME, mRNA sequence
Length = 394
Score = 36.2 bits (18), Expect = 3.8
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 541 cgccgccgtcgtcgacga 558
||||||||||||||||||
Sbjct: 249 cgccgccgtcgtcgacga 232
>gb|CA020734.1|CA020734 HZ37H02r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ37H02
5-PRIME, mRNA sequence
Length = 519
Score = 36.2 bits (18), Expect = 3.8
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 1160 atcaaggagacgctgcggctgc 1181
||||||||||||| ||||||||
Sbjct: 137 atcaaggagacgcagcggctgc 158
>gb|CA023718.1|CA023718 HZ47D02r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ47D02
5-PRIME, mRNA sequence
Length = 428
Score = 36.2 bits (18), Expect = 3.8
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 1160 atcaaggagacgctgcggctgc 1181
||||||||||||| ||||||||
Sbjct: 86 atcaaggagacgcagcggctgc 107
>gb|CA024279.1|CA024279 HZ48N20r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ48N20
5-PRIME, mRNA sequence
Length = 413
Score = 36.2 bits (18), Expect = 3.8
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 541 cgccgccgtcgtcgacga 558
||||||||||||||||||
Sbjct: 233 cgccgccgtcgtcgacga 216
>gb|CA024846.1|CA024846 HZ50H17r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ50H17
5-PRIME, mRNA sequence
Length = 479
Score = 36.2 bits (18), Expect = 3.8
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 541 cgccgccgtcgtcgacga 558
||||||||||||||||||
Sbjct: 34 cgccgccgtcgtcgacga 17
>gb|CA026023.1|CA026023 HZ53N22r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ53N22
5-PRIME, mRNA sequence
Length = 602
Score = 36.2 bits (18), Expect = 3.8
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 541 cgccgccgtcgtcgacga 558
||||||||||||||||||
Sbjct: 302 cgccgccgtcgtcgacga 285
>gb|CA026296.1|CA026296 HZ55I02r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ55I02
5-PRIME, mRNA sequence
Length = 424
Score = 36.2 bits (18), Expect = 3.8
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 1160 atcaaggagacgctgcggctgc 1181
||||||||||||| ||||||||
Sbjct: 178 atcaaggagacgcagcggctgc 199
>gb|CA026355.1|CA026355 HZ55K22r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ55K22
5-PRIME, mRNA sequence
Length = 511
Score = 36.2 bits (18), Expect = 3.8
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 541 cgccgccgtcgtcgacga 558
||||||||||||||||||
Sbjct: 152 cgccgccgtcgtcgacga 135
>gb|CA026400.1|CA026400 HZ55M23r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ55M23
5-PRIME, mRNA sequence
Length = 466
Score = 36.2 bits (18), Expect = 3.8
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 541 cgccgccgtcgtcgacga 558
||||||||||||||||||
Sbjct: 227 cgccgccgtcgtcgacga 210
>gb|CA032212.1|CA032212 HX12F20r HX Hordeum vulgare subsp. vulgare cDNA clone HX12F20
5-PRIME, mRNA sequence
Length = 267
Score = 36.2 bits (18), Expect = 3.8
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 541 cgccgccgtcgtcgacga 558
||||||||||||||||||
Sbjct: 225 cgccgccgtcgtcgacga 208
>gb|CA032956.1|CA032956 HX14L04r HX Hordeum vulgare subsp. vulgare cDNA clone HX14L04
5-PRIME, mRNA sequence
Length = 586
Score = 36.2 bits (18), Expect = 3.8
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 541 cgccgccgtcgtcgacga 558
||||||||||||||||||
Sbjct: 432 cgccgccgtcgtcgacga 415
>gb|CB877535.1|CB877535 HP05E13T HP Hordeum vulgare subsp. vulgare cDNA clone HP05E13
5-PRIME, mRNA sequence
Length = 419
Score = 36.2 bits (18), Expect = 3.8
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 539 gccgccgccgtcgtcgac 556
||||||||||||||||||
Sbjct: 223 gccgccgccgtcgtcgac 240
>gb|CB882626.1|CB882626 HL02G14w HL Hordeum vulgare subsp. vulgare cDNA clone HL02G14
3-PRIME, mRNA sequence
Length = 577
Score = 36.2 bits (18), Expect = 3.8
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 541 cgccgccgtcgtcgacga 558
||||||||||||||||||
Sbjct: 504 cgccgccgtcgtcgacga 487
>gb|CB883089.1|CB883089 HQ01C17w HQ Hordeum vulgare subsp. vulgare cDNA clone HQ01C17
3-PRIME, mRNA sequence
Length = 596
Score = 36.2 bits (18), Expect = 3.8
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 541 cgccgccgtcgtcgacga 558
||||||||||||||||||
Sbjct: 474 cgccgccgtcgtcgacga 457
>gb|CK122673.1|CK122673 BES1824104p19 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010P194 5-PRIME, mRNA sequence
Length = 613
Score = 36.2 bits (18), Expect = 3.8
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 541 cgccgccgtcgtcgacga 558
||||||||||||||||||
Sbjct: 396 cgccgccgtcgtcgacga 379
>gb|CK123032.1|CK123032 BES1824101m16 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010M161 5-PRIME, mRNA sequence
Length = 696
Score = 36.2 bits (18), Expect = 3.8
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 541 cgccgccgtcgtcgacga 558
||||||||||||||||||
Sbjct: 489 cgccgccgtcgtcgacga 472
>emb|AM039897.1| Hordeum vulgare mRNA for S-adenosyl-L-homocysteine hydrolase (ahh1
gene)
Length = 1472
Score = 36.2 bits (18), Expect = 3.8
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 541 cgccgccgtcgtcgacga 558
||||||||||||||||||
Sbjct: 424 cgccgccgtcgtcgacga 407
>emb|AM039898.1| Hordeum vulgare mRNA for putative S-adenosylhomocystein hydrolase 2
(ahh2 gene)
Length = 1767
Score = 36.2 bits (18), Expect = 3.8
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 541 cgccgccgtcgtcgacga 558
||||||||||||||||||
Sbjct: 427 cgccgccgtcgtcgacga 410
Database: Hordeum_nucl_with_EST.fasta
Posted date: May 2, 2006 2:38 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 314,886
Number of Sequences: 312970
Number of extensions: 314886
Number of successful extensions: 94122
Number of sequences better than 10.0: 251
Number of HSP's better than 10.0 without gapping: 251
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 93470
Number of HSP's gapped (non-prelim): 598
length of query: 1794
length of database: 175,134,539
effective HSP length: 19
effective length of query: 1775
effective length of database: 169,188,109
effective search space: 300308893475
effective search space used: 300308893475
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)