BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AF332176.2.1
(912 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BF622288.3|BF622288 HVSMEa0002I16f Hordeum vulgare seedl... 349 1e-094
gb|BQ764067.1|BQ764067 EBro03_SQ006_N05_R root, 3 week, wat... 268 3e-070
gb|BM097618.2|BM097618 EBem04_SQ002_D15_R embryo, 12 DPA, n... 260 7e-068
gb|BI959138.1|BI959138 HVSMEn0018F10f Hordeum vulgare rachi... 218 2e-055
gb|BI958784.1|BI958784 HVSMEn0016J13f Hordeum vulgare rachi... 204 4e-051
gb|BI949344.1|BI949344 HVSMEl0013G22f Hordeum vulgare spike... 196 9e-049
gb|CV054003.1|CV054003 BNEL105f8 Barley EST endosperm libra... 196 9e-049
gb|CV054400.1|CV054400 BNEL10B12 Barley EST endosperm libra... 196 9e-049
gb|CV063456.1|CV063456 BNEL8E2 Barley EST endosperm library... 196 9e-049
gb|CB883447.1|CB883447 HQ02E17w HQ Hordeum vulgare subsp. v... 194 4e-048
gb|CV063939.1|CV063939 BNEL94h5 Barley EST endosperm librar... 192 1e-047
gb|CV060611.1|CV060611 BNEL5B4 Barley EST endosperm library... 190 6e-047
gb|CV061225.1|CV061225 BNEL66d10 Barley EST endosperm libra... 190 6e-047
gb|CV063217.1|CV063217 BNEL87h3 Barley EST endosperm librar... 190 6e-047
gb|BQ458429.1|BQ458429 HA05E07r HA Hordeum vulgare subsp. v... 188 2e-046
gb|BU981055.1|BU981055 HA22I03r HA Hordeum vulgare subsp. v... 188 2e-046
gb|BI956772.1|BI956772 HVSMEn0005E06f Hordeum vulgare rachi... 186 9e-046
gb|BI957603.1|BI957603 HVSMEn0010F11f Hordeum vulgare rachi... 186 9e-046
gb|BI960458.1|BI960458 HVSMEn0024K16f Hordeum vulgare rachi... 184 3e-045
gb|BI956858.1|BI956858 HVSMEn0005K24f Hordeum vulgare rachi... 180 5e-044
gb|BI959353.1|BI959353 HVSMEn0019F12f Hordeum vulgare rachi... 176 8e-043
gb|BU981754.1|BU981754 HA24I17r HA Hordeum vulgare subsp. v... 172 1e-041
gb|CV060955.1|CV060955 BNEL63c5 Barley EST endosperm librar... 168 2e-040
gb|BI959698.1|BI959698 HVSMEn0020N13f Hordeum vulgare rachi... 167 8e-040
gb|BQ760850.1|BQ760850 EBro03_SQ003_K11_R root, 3 week, wat... 167 8e-040
gb|BU995090.1|BU995090 HM09C23r HM Hordeum vulgare subsp. v... 167 8e-040
gb|BU967134.1|BU967134 HB03G05r BC Hordeum vulgare subsp. v... 161 5e-038
gb|BI959720.1|BI959720 HVSMEn0020P05f Hordeum vulgare rachi... 159 2e-037
gb|BQ470849.1|BQ470849 HX04D14r HX Hordeum vulgare subsp. v... 159 2e-037
gb|BQ665573.1|BQ665573 HX04D14u HX Hordeum vulgare subsp. v... 159 2e-037
gb|BI959771.1|BI959771 HVSMEn0021G03f Hordeum vulgare rachi... 151 5e-035
gb|BU981183.1|BU981183 HA22N23r HA Hordeum vulgare subsp. v... 149 2e-034
gb|CA022206.1|CA022206 HZ42H09r HZ Hordeum vulgare subsp. v... 149 2e-034
gb|BG365461.2|BG365461 HVSMEi0002M09f Hordeum vulgare 20 DA... 145 3e-033
gb|BG369408.2|BG369408 HVSMEi0024E17f Hordeum vulgare 20 DA... 145 3e-033
gb|AL507275.1|AL507275 AL507275 Hordeum vulgare Barke devel... 143 1e-032
gb|BI959378.1|BI959378 HVSMEn0019H04f Hordeum vulgare rachi... 143 1e-032
gb|BI959654.1|BI959654 HVSMEn0020K03f Hordeum vulgare rachi... 143 1e-032
gb|BE196421.3|BE196421 HVSMEh0092D24f Hordeum vulgare 5-45 ... 143 1e-032
gb|BE603113.3|BE603113 HVSMEh0101P24f Hordeum vulgare 5-45 ... 143 1e-032
gb|BQ758707.1|BQ758707 EBma07_SQ002_G16_R maternal, 21 DPA,... 143 1e-032
gb|BU993991.1|BU993991 HM05E17r HM Hordeum vulgare subsp. v... 143 1e-032
gb|BG310251.1|BG310251 HVSMEc0016K12f Hordeum vulgare seedl... 133 1e-029
gb|BI957582.1|BI957582 HVSMEn0010D14f Hordeum vulgare rachi... 133 1e-029
gb|BQ469285.1|BQ469285 HM03P13r HM Hordeum vulgare subsp. v... 133 1e-029
gb|BM372935.2|BM372935 EBma04_SQ002_H04_R maternal, 10 DPA,... 133 1e-029
gb|BQ759881.1|BQ759881 EBpi05_SQ004_P16_R pistil, 8 DPA, no... 133 1e-029
gb|CB882163.1|CB882163 HL01B01w HL Hordeum vulgare subsp. v... 133 1e-029
gb|CK122346.1|CK122346 BES1824102p12 BES1824 Hordeum vulgar... 133 1e-029
gb|CK125696.1|CK125696 BES1824110b08 BES1824 Hordeum vulgar... 133 1e-029
gb|BI956518.1|BI956518 HVSMEn0003O09f Hordeum vulgare rachi... 131 4e-029
gb|CV054086.1|CV054086 BNEL106e9 Barley EST endosperm libra... 129 2e-028
gb|BI960089.1|BI960089 HVSMEn0023C15f Hordeum vulgare rachi... 125 3e-027
gb|BF254126.2|BF254126 HVSMEf0003B13f Hordeum vulgare seedl... 123 1e-026
gb|BF256653.2|BF256653 HVSMEf0010J19f Hordeum vulgare seedl... 123 1e-026
gb|BI960393.1|BI960393 HVSMEn0024H07f Hordeum vulgare rachi... 123 1e-026
gb|AV917139.1|AV917139 AV917139 K. Sato unpublished cDNA li... 123 1e-026
gb|BQ465138.1|BQ465138 HU02M06r HU Hordeum vulgare subsp. v... 123 1e-026
gb|BU978694.1|BU978694 HA14A06r HA Hordeum vulgare subsp. v... 123 1e-026
gb|BU980194.1|BU980194 HA18P06r HA Hordeum vulgare subsp. v... 123 1e-026
gb|CA019796.1|CA019796 HV13D05r HV Hordeum vulgare subsp. v... 123 1e-026
gb|CA019997.1|CA019997 HV14A15r HV Hordeum vulgare subsp. v... 123 1e-026
gb|CA031744.1|CA031744 HX11A03r HX Hordeum vulgare subsp. v... 123 1e-026
gb|CK122737.1|CK122737 BES1824105j22 BES1824 Hordeum vulgar... 123 1e-026
gb|CK123980.1|CK123980 BES1824106f16 BES1824 Hordeum vulgar... 123 1e-026
gb|CK124612.1|CK124612 BES1824109m10 BES1824 Hordeum vulgar... 123 1e-026
gb|CV061235.1|CV061235 BNEL66d9 Barley EST endosperm librar... 117 7e-025
gb|BF259343.2|BF259343 HVSMEf0019F11f Hordeum vulgare seedl... 115 3e-024
gb|BE454367.2|BE454367 HVSMEh0093N18f Hordeum vulgare 5-45 ... 107 6e-022
gb|BI957226.1|BI957226 HVSMEn0008D17f Hordeum vulgare rachi... 107 6e-022
gb|BE060246.3|BE060246 HVSMEg0011L08f Hordeum vulgare pre-a... 107 6e-022
gb|BQ459628.1|BQ459628 HA08J01r HA Hordeum vulgare subsp. v... 107 6e-022
gb|CK124171.1|CK124171 BES1824107e17 BES1824 Hordeum vulgar... 107 6e-022
gb|BF253787.2|BF253787 HVSMEf0002C01f Hordeum vulgare seedl... 105 3e-021
gb|BI954215.1|BI954215 HVSMEm0016K09f Hordeum vulgare green... 103 1e-020
gb|BG416780.1|BG416780 HVSMEk0014H23f Hordeum vulgare testa... 103 1e-020
gb|BI959328.1|BI959328 HVSMEn0019E09f Hordeum vulgare rachi... 103 1e-020
gb|CB882255.1|CB882255 HL01F14w HL Hordeum vulgare subsp. v... 103 1e-020
gb|CW512145.1|CW512145 ToNAR_Morex_118b Morex Exon trapped ... 100 2e-019
gb|BF628930.2|BF628930 HVSMEb0009C23f Hordeum vulgare seedl... 100 2e-019
gb|AV917082.1|AV917082 AV917082 K. Sato unpublished cDNA li... 100 2e-019
gb|AV923254.1|AV923254 AV923254 K. Sato unpublished cDNA li... 100 2e-019
gb|BQ767787.1|BQ767787 EBro08_SQ009_H22_R root, 3 week, dro... 100 2e-019
gb|CA022237.1|CA022237 HZ42I19r HZ Hordeum vulgare subsp. v... 100 2e-019
gb|CA023986.1|CA023986 HZ48A15r HZ Hordeum vulgare subsp. v... 100 2e-019
gb|BI957183.1|BI957183 HVSMEn0007P24f Hordeum vulgare rachi... 98 6e-019
gb|BM101447.2|BM101447 EBpi01_SQ003_O01_R pistil, 1 DPA, no... 98 6e-019
gb|BU986289.1|BU986289 HF11E17r HF Hordeum vulgare subsp. v... 98 6e-019
gb|BU990646.1|BU990646 HF25K12r HF Hordeum vulgare subsp. v... 98 6e-019
gb|CA017263.1|CA017263 HV14A15u HV Hordeum vulgare subsp. v... 98 6e-019
gb|CA028060.1|CA028060 HZ60N21r HZ Hordeum vulgare subsp. v... 98 6e-019
gb|CB880652.1|CB880652 HM07E17w HM Hordeum vulgare subsp. v... 98 6e-019
gb|CB881234.1|CB881234 HM09C23w HM Hordeum vulgare subsp. v... 98 6e-019
gb|CK122095.1|CK122095 BES1824101g21 BES1824 Hordeum vulgar... 98 6e-019
gb|BI959812.1|BI959812 HVSMEn0021L03f Hordeum vulgare rachi... 96 2e-018
gb|BQ661556.1|BQ661556 HM03P13u HM Hordeum vulgare subsp. v... 94 1e-017
gb|BM097179.2|BM097179 EBpi07_SQ002_K14_R pistil, 12 DPA, n... 94 1e-017
gb|BU968145.1|BU968145 HB06J03r BC Hordeum vulgare subsp. v... 94 1e-017
gb|BU983094.1|BU983094 HA28I14r HA Hordeum vulgare subsp. v... 94 1e-017
gb|BU984183.1|BU984183 HF03D17r HF Hordeum vulgare subsp. v... 94 1e-017
gb|BF618493.2|BF618493 HVSMEc0005N13f Hordeum vulgare seedl... 92 4e-017
gb|BI958795.1|BI958795 HVSMEn0016K11f Hordeum vulgare rachi... 90 2e-016
gb|BQ765573.1|BQ765573 EBro03_SQ007_F17_R root, 3 week, wat... 90 2e-016
gb|CV058074.1|CV058074 BNEL34a7 Barley EST endosperm librar... 88 6e-016
gb|BI956468.1|BI956468 HVSMEn0003I18f Hordeum vulgare rachi... 84 9e-015
gb|BI958420.1|BI958420 HVSMEn0014O10f Hordeum vulgare rachi... 84 9e-015
gb|BF625170.3|BF625170 HVSMEa0006D08f Hordeum vulgare seedl... 80 1e-013
gb|BI957249.1|BI957249 HVSMEn0008G13f Hordeum vulgare rachi... 78 6e-013
gb|CV055940.1|CV055940 BNEL12B5 Barley EST endosperm librar... 78 6e-013
gb|BQ459308.1|BQ459308 HA01I15r HA Hordeum vulgare subsp. v... 76 2e-012
gb|CA004554.1|CA004554 HS17P08r HS Hordeum vulgare subsp. v... 72 4e-011
gb|BQ658207.1|BQ658207 HA05E07u HA Hordeum vulgare subsp. v... 68 6e-010
gb|CA004842.1|CA004842 HS18N14r HS Hordeum vulgare subsp. v... 62 3e-008
gb|BG368652.1|BG368652 HVSMEi0020B24f Hordeum vulgare 20 DA... 60 1e-007
gb|BG368109.2|BG368109 HVSMEi0015L12f Hordeum vulgare 20 DA... 60 1e-007
gb|BG368126.2|BG368126 HVSMEi0015M21f Hordeum vulgare 20 DA... 60 1e-007
gb|BM098205.2|BM098205 EBpi03_SQ002_N14_R pistil, 4 DPA, no... 60 1e-007
gb|BU980984.1|BU980984 HA22E18r HA Hordeum vulgare subsp. v... 60 1e-007
gb|BE421427.1|BE421427 HWM009.B12 ITEC HWM Barley Leaf Libr... 58 5e-007
gb|BF260026.3|BF260026 HVSMEf0020O13f Hordeum vulgare seedl... 58 5e-007
gb|AV928430.1|AV928430 AV928430 K. Sato unpublished cDNA li... 58 5e-007
gb|BJ453165.1|BJ453165 BJ453165 K. Sato unpublished cDNA li... 58 5e-007
gb|BJ460714.1|BJ460714 BJ460714 K. Sato unpublished cDNA li... 58 5e-007
gb|BQ467895.1|BQ467895 HR01E04r HR Hordeum vulgare subsp. v... 58 5e-007
gb|CA001233.1|CA001233 HS18N14u HS Hordeum vulgare subsp. v... 58 5e-007
gb|BQ468475.1|BQ468475 HM01F21T HM Hordeum vulgare subsp. v... 56 2e-006
gb|BQ469137.1|BQ469137 HM03I08r HM Hordeum vulgare subsp. v... 56 2e-006
gb|CB883976.1|CB883976 HM06N05r HM Hordeum vulgare subsp. v... 56 2e-006
gb|CB884030.1|CB884030 HM10H05r HM Hordeum vulgare subsp. v... 56 2e-006
gb|CB884040.1|CB884040 HM11B07r HM Hordeum vulgare subsp. v... 56 2e-006
gb|CB884057.1|CB884057 HM12C11r HM Hordeum vulgare subsp. v... 56 2e-006
gb|BQ662029.1|BQ662029 HR01E04u HR Hordeum vulgare subsp. v... 54 8e-006
gb|CA001449.1|CA001449 HS17P08u HS Hordeum vulgare subsp. v... 54 8e-006
gb|BG369116.2|BG369116 HVSMEi0021M10f Hordeum vulgare 20 DA... 52 3e-005
gb|BQ767806.1|BQ767806 EBro08_SQ009_L19_R root, 3 week, dro... 52 3e-005
gb|BF257093.3|BF257093 HVSMEf0011N11f Hordeum vulgare seedl... 50 1e-004
gb|CA019924.1|CA019924 HV13L18r HV Hordeum vulgare subsp. v... 50 1e-004
gb|AL504600.1|AL504600 AL504600 Hordeum vulgare Barke roots... 48 5e-004
gb|BG300504.2|BG300504 HVSMEb0017E15f Hordeum vulgare seedl... 48 5e-004
gb|CA018998.1|CA018998 HV10G08r HV Hordeum vulgare subsp. v... 48 5e-004
gb|AL509792.1|AL509792 AL509792 Hordeum vulgare Barke devel... 44 0.008
gb|BG299356.2|BG299356 HVSMEa0019J09f Hordeum vulgare seedl... 44 0.008
gb|BG308983.2|BG308983 HVSMEc0001E03f Hordeum vulgare seedl... 44 0.008
gb|BG368897.2|BG368897 HVSMEi0021D09f Hordeum vulgare 20 DA... 44 0.008
gb|BJ467335.1|BJ467335 BJ467335 K. Sato unpublished cDNA li... 44 0.008
gb|BM372620.2|BM372620 EBpi05_SQ003_H14_R pistil, 8 DPA, no... 44 0.008
gb|BQ767036.1|BQ767036 EBro08_SQ007_G24_R root, 3 week, dro... 44 0.008
gb|BU978858.1|BU978858 HA14H15r HA Hordeum vulgare subsp. v... 44 0.008
gb|BE060291.3|BE060291 HVSMEg0011O02f Hordeum vulgare pre-a... 42 0.032
gb|AV918336.1|AV918336 AV918336 K. Sato unpublished cDNA li... 42 0.032
gb|AV918397.1|AV918397 AV918397 K. Sato unpublished cDNA li... 42 0.032
gb|AJ436055.1|AJ436055 AJ436055 S00002 Hordeum vulgare subs... 42 0.032
gb|AJ461923.1|AJ461923 AJ461923 S00002 Hordeum vulgare subs... 42 0.032
gb|AJ462522.1|AJ462522 AJ462522 S00002 Hordeum vulgare subs... 42 0.032
gb|AJ462523.1|AJ462523 AJ462523 S00002 Hordeum vulgare subs... 42 0.032
gb|AJ462588.1|AJ462588 AJ462588 S00002 Hordeum vulgare subs... 42 0.032
gb|BQ661443.1|BQ661443 HM03I08u HM Hordeum vulgare subsp. v... 42 0.032
gb|BQ663461.1|BQ663461 HU02M06u HU Hordeum vulgare subsp. v... 42 0.032
gb|CA004936.1|CA004936 HU12M15u HU Hordeum vulgare subsp. v... 42 0.032
gb|CA017320.1|CA017320 HV12M19u HV Hordeum vulgare subsp. v... 42 0.032
gb|CA020830.1|CA020830 HZ37P09r HZ Hordeum vulgare subsp. v... 42 0.032
gb|CB876346.1|CB876346 HX11A03w HX Hordeum vulgare subsp. v... 42 0.032
gb|CB880524.1|CB880524 HM06N05w HM Hordeum vulgare subsp. v... 42 0.032
gb|CB881625.1|CB881625 HM10G06w HM Hordeum vulgare subsp. v... 42 0.032
gb|BE193294.3|BE193294 HVSMEh0080H17f Hordeum vulgare 5-45 ... 40 0.12
gb|BE193443.3|BE193443 HVSMEh0081A10f Hordeum vulgare 5-45 ... 40 0.12
gb|BG367014.2|BG367014 HVSMEi0009N03f Hordeum vulgare 20 DA... 40 0.12
gb|BG367966.2|BG367966 HVSMEi0015B12f Hordeum vulgare 20 DA... 40 0.12
gb|BG369955.2|BG369955 HVSMEi0026K23f Hordeum vulgare 20 DA... 40 0.12
gb|BI777207.2|BI777207 EBro03_SQ002_G16_R root, 3 week, wat... 40 0.12
gb|BQ763405.1|BQ763405 EBro02_SQ008_D08_R root, 3 week, hyd... 40 0.12
gb|BU999814.1|BU999814 HI15O16r HI Hordeum vulgare subsp. v... 40 0.12
gb|CB883273.1|CB883273 HQ01L13w HQ Hordeum vulgare subsp. v... 40 0.12
gb|AL501674.1|AL501674 AL501674 Hordeum vulgare Barke roots... 38 0.49
gb|AL504345.1|AL504345 AL504345 Hordeum vulgare Barke roots... 38 0.49
gb|AL506858.1|AL506858 AL506858 Hordeum vulgare Barke devel... 38 0.49
gb|BF256315.1|BF256315 HVSMEf0009N16f Hordeum vulgare seedl... 38 0.49
gb|BF628722.2|BF628722 HVSMEb0007I03f Hordeum vulgare seedl... 38 0.49
gb|BE230894.2|BE230894 HVSMEg0001I02f Hordeum vulgare pre-a... 38 0.49
gb|BG365237.2|BG365237 HVSMEi0001O20f Hordeum vulgare 20 DA... 38 0.49
gb|BG367097.2|BG367097 HVSMEi0010F14f Hordeum vulgare 20 DA... 38 0.49
gb|BM373911.1|BM373911 EBma03_SQ003_B14_R maternal, 8 DPA, ... 38 0.49
gb|BJ446884.1|BJ446884 BJ446884 K. Sato unpublished cDNA li... 38 0.49
gb|BJ447206.1|BJ447206 BJ447206 K. Sato unpublished cDNA li... 38 0.49
gb|BJ453908.1|BJ453908 BJ453908 K. Sato unpublished cDNA li... 38 0.49
gb|BJ454710.1|BJ454710 BJ454710 K. Sato unpublished cDNA li... 38 0.49
gb|BJ454885.1|BJ454885 BJ454885 K. Sato unpublished cDNA li... 38 0.49
gb|BJ461443.1|BJ461443 BJ461443 K. Sato unpublished cDNA li... 38 0.49
gb|BJ466099.1|BJ466099 BJ466099 K. Sato unpublished cDNA li... 38 0.49
gb|BQ462952.1|BQ462952 HI02I15r HI Hordeum vulgare subsp. v... 38 0.49
gb|BQ660436.1|BQ660436 HI02I15u HI Hordeum vulgare subsp. v... 38 0.49
gb|BM374193.2|BM374193 EBma03_SQ003_O17_R maternal, 8 DPA, ... 38 0.49
gb|BM373072.2|BM373072 EBma04_SQ002_P16_R maternal, 10 DPA,... 38 0.49
gb|BQ764220.1|BQ764220 EBan01_SQ005_P04_R anther, yellow st... 38 0.49
gb|BQ764421.1|BQ764421 EBan01_SQ005_G21_R anther, yellow st... 38 0.49
gb|BQ766938.1|BQ766938 EBro08_SQ007_D18_R root, 3 week, dro... 38 0.49
gb|BQ767169.1|BQ767169 EBro08_SQ008_L06_R root, 3 week, dro... 38 0.49
gb|BU969234.1|BU969234 HB10P03r BC Hordeum vulgare subsp. v... 38 0.49
gb|BU974554.1|BU974554 HB28E20r BC Hordeum vulgare subsp. v... 38 0.49
gb|BU974861.1|BU974861 HB29F07r BC Hordeum vulgare subsp. v... 38 0.49
gb|BU975788.1|BU975788 HB32E24r BC Hordeum vulgare subsp. v... 38 0.49
gb|BU995044.1|BU995044 HM09A07r HM Hordeum vulgare subsp. v... 38 0.49
gb|BU995588.1|BU995588 HM10L15r HM Hordeum vulgare subsp. v... 38 0.49
gb|CA016538.1|CA016538 HV08G16u HV Hordeum vulgare subsp. v... 38 0.49
gb|CA022814.1|CA022814 HZ44H01r HZ Hordeum vulgare subsp. v... 38 0.49
emb|AJ866822.1| Hordeum vulgare subsp. vulgare transposon M... 38 0.49
emb|AJ866823.1| Hordeum vulgare subsp. vulgare transposon M... 38 0.49
emb|AJ866824.1| Hordeum vulgare subsp. vulgare transposon M... 38 0.49
emb|AJ866826.1| Hordeum vulgare subsp. vulgare transposon M... 38 0.49
>gb|BF622288.3|BF622288 HVSMEa0002I16f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0002I16f, mRNA sequence
Length = 851
Score = 349 bits (176), Expect = 1e-094
Identities = 370/435 (85%), Gaps = 6/435 (1%)
Strand = Plus / Plus
Query: 13 cggcggcgcgtgcggcttcaagggcgtgaacatgccacctttctcggcgatgacgtcgtg 72
||||||||| ||||| |||||| ||| ||| ||||||| ||||| || ||||| || ||
Sbjct: 97 cggcggcgcctgcgggttcaagaacgtcaacctgccacccttctccgccatgacctcctg 156
Query: 73 cggcaacgagccaatcttcaaggacggcaaaggatgcgggtcctgctaccagatccggtg 132
|||||||||||| |||||||||||||||| || ||||| |||||||||||||| |||||
Sbjct: 157 cggcaacgagccgctcttcaaggacggcaagggctgcggctcctgctaccagatacggtg 216
Query: 133 caaggc------ccaccctgcgtgctccggcgtggcggagacggtgatcatcacggacat 186
| | | |||||| ||||||||||||||| |||||||||||||||||||||||||
Sbjct: 217 cgtgtcggcgggccacccggcgtgctccggcgtgccggagacggtgatcatcacggacat 276
Query: 187 gaactactacccggtggccccctaccacttcgacctgagcggcactgccttcggggccat 246
|||||||||||||||| ||| || |||||||||||| |||||||| |||||||| |||||
Sbjct: 277 gaactactacccggtgtcccgcttccacttcgacctcagcggcaccgccttcggcgccat 336
Query: 247 ggcaaaagacgagcacaacgacgagctaaggcacgcaggaatcatcgacatccagttcaa 306
||| || |||| | |||||| ||||| ||||||| || ||||||||||| |||||||
Sbjct: 337 ggccaaggacggccgcaacgaagagctccggcacgccggcatcatcgacatgcagttcag 396
Query: 307 gagggttccctgccagtaccctggtctgacggtgaccttccacatcgagcgcggctccaa 366
||||| || ||||||||||| || ||||||||||| |||||| | ||| ||| |||||
Sbjct: 397 aagggtgccgtgccagtacccggggctgacggtgacgttccacgtgcagcacggttccaa 456
Query: 367 ccccaactacctggcggtgctggtggagtacgagaacggcgacggcgacgtggtgcaggt 426
|||| |||||||||| | |||||||||||||||||||||||||||||||||| |||||
Sbjct: 457 cccctactacctggccatcctggtggagtacgagaacggcgacggcgacgtggaccaggt 516
Query: 427 ggacctgatggagtc 441
|||| ||||| ||||
Sbjct: 517 ggacatgatgcagtc 531
Score = 123 bits (62), Expect = 1e-026
Identities = 137/162 (84%)
Strand = Plus / Plus
Query: 473 tgggagcccatgcgcgagtcctggggctccatatggaggatggacacccgccggccgctg 532
|||| ||||||| |||||||||||||||||| ||| |||||||||| || || || ||
Sbjct: 581 tgggtgcccatgaccgagtcctggggctccatctggcggatggacacacggcgccccatg 640
Query: 533 caagggcccttctcgctgcgcgtcaccaacgagtccggcaagacgctggtggcggaccag 592
|| || ||||||||||||||| ||||||||||||||||||||||||| || || ||||||
Sbjct: 641 cagggccccttctcgctgcgcatcaccaacgagtccggcaagacgctcgtcgccgaccag 700
Query: 593 gtcattccggcagactggcagcccgacaacgtctacagctcc 634
|||| ||| | |||||| ||||| || | |||||||||||
Sbjct: 701 gtcaatcccggcgactgggagcccaacgaaatctacagctcc 742
>gb|BQ764067.1|BQ764067 EBro03_SQ006_N05_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ006_N05 5', mRNA sequence
Length = 625
Score = 268 bits (135), Expect = 3e-070
Identities = 269/314 (85%), Gaps = 6/314 (1%)
Strand = Plus / Plus
Query: 17 ggcgcgtgcggcttcaagggcgtgaacatgccacctttctcggcgatgacgtcgtgcggc 76
||||||||||| |||||| ||||||| |||| || ||| || |||||||||||||||
Sbjct: 312 ggcgcgtgcgggttcaagaacgtgaacctgccgcccttcaacgccatgacgtcgtgcggc 371
Query: 77 aacgagccaatcttcaaggacggcaaaggatgcgggtcctgctaccagatccggtgc--- 133
|||||||| ||||||||||||||||| |||||||| |||||||||||||| |||||
Sbjct: 372 aacgagccgatcttcaaggacggcaagggatgcggctcctgctaccagataaggtgcgtg 431
Query: 134 ---aaggcccaccctgcgtgctccggcgtggcggagacggtgatcatcacggacatgaac 190
|||| ||||| ||||||||||||| | ||||||||||||||||| |||||||||
Sbjct: 432 ggcaaggttcacccagcgtgctccggcgaccccgagacggtgatcatcaccgacatgaac 491
Query: 191 tactacccggtggccccctaccacttcgacctgagcggcactgccttcggggccatggca 250
||||||||||| |||| ||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 492 tactacccggtcgcccgctaccacttcgacctcagcggcactgccttcggcgccatggcc 551
Query: 251 aaagacgagcacaacgacgagctaaggcacgcaggaatcatcgacatccagttcaagagg 310
||||||| | |||||||||||| | ||||| || ||||||||||| ||||||||||||
Sbjct: 552 aaagacggccgcaacgacgagctccgccacgccggcatcatcgacatgcagttcaagagg 611
Query: 311 gttccctgccagta 324
|| || ||||||||
Sbjct: 612 gtgccgtgccagta 625
>gb|BM097618.2|BM097618 EBem04_SQ002_D15_R embryo, 12 DPA, no treatment, cv Optic, EBem04
Hordeum vulgare subsp. vulgare cDNA clone
EBem04_SQ002_D15 5', mRNA sequence
Length = 477
Score = 260 bits (131), Expect = 7e-068
Identities = 299/355 (84%), Gaps = 5/355 (1%)
Strand = Plus / Plus
Query: 87 tcttcaaggacggcaaaggatgcgggtcctgctaccagatccggtgcaaggcccaccctg 146
|||||||||||||||| || ||||| || ||||||||| |||| |||||| | ||
Sbjct: 6 tcttcaaggacggcaaggggtgcggctcatgctaccag-----gtgcgtggcccatcgtg 60
Query: 147 cgtgctccggcgtggcggagacggtgatcatcacggacatgaactactacccggtggccc 206
| ||||||||||| |||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 61 cctgctccggcgtcccggaaacggtgatcatcacggacatgaactactacccggtctccc 120
Query: 207 cctaccacttcgacctgagcggcactgccttcggggccatggcaaaagacgagcacaacg 266
||| || || ||||| |||||||| |||||||| |||||||| || ||| | |||||
Sbjct: 121 gctatcattttgacctcagcggcaccgccttcggtgccatggccaagtacggccgcaacg 180
Query: 267 acgagctaaggcacgcaggaatcatcgacatccagttcaagagggttccctgccagtacc 326
||||||| | ||||| || ||||||||||| |||||||||||||| || ||||||||||
Sbjct: 181 acgagctccgccacgctggcatcatcgacatgcagttcaagagggtgccgtgccagtacc 240
Query: 327 ctggtctgacggtgaccttccacatcgagcgcggctccaaccccaactacctggcggtgc 386
| || || |||||||| |||| | | ||| ||| ||||||||||||||||||||| | |
Sbjct: 241 cggggctcacggtgacgttccgcgtgcagcacgggtccaaccccaactacctggcgatcc 300
Query: 387 tggtggagtacgagaacggcgacggcgacgtggtgcaggtggacctgatggagtc 441
|||||||||||||| |||||||||||||||||| |||||||||| | ||||||||
Sbjct: 301 tggtggagtacgaggacggcgacggcgacgtggcgcaggtggacataatggagtc 355
Score = 50.1 bits (25), Expect = 1e-004
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 527 ccgctgcaagggcccttctcgctgcgcgtcacc 559
|||||||| ||||| ||||||||||||||||||
Sbjct: 441 ccgctgcaggggccattctcgctgcgcgtcacc 473
>gb|BI959138.1|BI959138 HVSMEn0018F10f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0018F10f, mRNA sequence
Length = 669
Score = 218 bits (110), Expect = 2e-055
Identities = 311/378 (82%)
Strand = Plus / Plus
Query: 62 atgacgtcgtgcggcaacgagccaatcttcaaggacggcaaaggatgcgggtcctgctac 121
||||| ||||||||||||||||| ||||||||||| ||||| |||||||| |||||||||
Sbjct: 192 atgacatcgtgcggcaacgagcccatcttcaaggatggcaagggatgcggctcctgctac 251
Query: 122 cagatccggtgcaaggcccaccctgcgtgctccggcgtggcggagacggtgatcatcacg 181
||||| ||||||| | ||| | ||||||||| ||||||||||| |||||||
Sbjct: 252 cagatacggtgcaccaacgaccagtcctgctccggcaacccggagacggtggtcatcacc 311
Query: 182 gacatgaactactacccggtggccccctaccacttcgacctgagcggcactgccttcggg 241
|||||||||||||||||||| ||| ||||||||||||||||| ||||| || |||||
Sbjct: 312 gacatgaactactacccggttgccaagtaccacttcgacctgagtggcaccgcgttcggc 371
Query: 242 gccatggcaaaagacgagcacaacgacgagctaaggcacgcaggaatcatcgacatccag 301
|||||||| || || | || ||| |||| ||||| | || |||||||||||||||
Sbjct: 372 gccatggccaagcccggcctcagcgagaagctccggcactccggcatcatcgacatccag 431
Query: 302 ttcaagagggttccctgccagtaccctggtctgacggtgaccttccacatcgagcgcggc 361
|||||||| || || ||| ||| ||||||||| | ||||||||||||| | |||| ||
Sbjct: 432 ttcaagagagtgccgtgcgagttccctggtctcaaggtgaccttccacgtggagcagggg 491
Query: 362 tccaaccccaactacctggcggtgctggtggagtacgagaacggcgacggcgacgtggtg 421
|| ||||| ||| | || |||||||||||||||||| |||||||||||||| |||||
Sbjct: 492 tcgaacccggtgtacttcgccgtgctggtggagtacgaggacggcgacggcgacttggtg 551
Query: 422 caggtggacctgatggag 439
||||||||||| ||||||
Sbjct: 552 caggtggacctcatggag 569
>gb|BI958784.1|BI958784 HVSMEn0016J13f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0016J13f, mRNA sequence
Length = 656
Score = 204 bits (103), Expect = 4e-051
Identities = 302/369 (81%)
Strand = Plus / Plus
Query: 62 atgacgtcgtgcggcaacgagccaatcttcaaggacggcaaaggatgcgggtcctgctac 121
||||| ||||||||||||||||| ||||||||||| ||||| |||||||| |||||||||
Sbjct: 288 atgacatcgtgcggcaacgagcccatcttcaaggatggcaagggatgcggctcctgctac 347
Query: 122 cagatccggtgcaaggcccaccctgcgtgctccggcgtggcggagacggtgatcatcacg 181
||||| ||||||| | ||| | ||||||||| ||||||||||| |||||||
Sbjct: 348 cagatacggtgcaccaacgaccagtcctgctccggcaacccggagacggtggtcatcacc 407
Query: 182 gacatgaactactacccggtggccccctaccacttcgacctgagcggcactgccttcggg 241
|||||||||||||||||||| ||| ||||||||||||||||| ||||| || |||||
Sbjct: 408 gacatgaactactacccggttgccaagtaccacttcgacctgagtggcaccgcgttcggc 467
Query: 242 gccatggcaaaagacgagcacaacgacgagctaaggcacgcaggaatcatcgacatccag 301
|||||||| || || | || ||| |||| ||||| | || |||||||||||||||
Sbjct: 468 gccatggccaagcccggcctcagcgagaagctccggcactccggcatcatcgacatccag 527
Query: 302 ttcaagagggttccctgccagtaccctggtctgacggtgaccttccacatcgagcgcggc 361
|||||||| || || ||| ||| ||||||||| | ||||||||||||| | |||| ||
Sbjct: 528 ttcaagagagtgccgtgcgagttccctggtctcaaggtgaccttccacgtggagcagggg 587
Query: 362 tccaaccccaactacctggcggtgctggtggagtacgagaacggcgacggcgacgtggtg 421
|| ||||| ||| | || |||||||||||||||||| |||||||||||||| |||||
Sbjct: 588 tcgaacccggtgtacttcgccgtgctggtggagtacgaggacggcgacggcgacntggtg 647
Query: 422 caggtggac 430
|| ||||||
Sbjct: 648 cangtggac 656
>gb|BI949344.1|BI949344 HVSMEl0013G22f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0013G22f, mRNA sequence
Length = 488
Score = 196 bits (99), Expect = 9e-049
Identities = 283/343 (82%), Gaps = 6/343 (1%)
Strand = Plus / Plus
Query: 13 cggcggcgcgtgcggcttcaagggcgtgaacatgccacctttctcggcgatgacgtcgtg 72
||||||||||||||| |||||| ||| ||| ||||||| ||||| | ||||| || ||
Sbjct: 139 cggcggcgcgtgcgggttcaagaacgtcaacttgccacccttctcctccatgacctcctg 198
Query: 73 cggcaacgagccaatcttcaaggacggcaaaggatgcgggtcctgctaccagatccggtg 132
||||||| | || |||||||||||||||| || ||||| |||||||||||||| ||||
Sbjct: 199 cggcaaccaaccgctcttcaaggacggcaagggctgcggctcctgctaccagataaggtg 258
Query: 133 c---aa---ggcccaccctgcgtgctccggcgtggcggagacggtgatcatcacggacat 186
| || || |||||||||||||||||| ||| || |||||||||||||||| |||||
Sbjct: 259 cttaaactcggaccaccctgcgtgctccggtgtgccgaagacggtgatcatcacagacat 318
Query: 187 gaactactacccggtggccccctaccacttcgacctgagcggcactgccttcggggccat 246
||||||| |||| || ||| ||||||||||||||| || ||||| |||||||| |||||
Sbjct: 319 gaactacgacccagtctcccgctaccacttcgacctcagtggcaccgccttcggagccat 378
Query: 247 ggcaaaagacgagcacaacgacgagctaaggcacgcaggaatcatcgacatccagttcaa 306
||| || ||| | |||||||||||| | ||||| || || ||| |||| ||||||||
Sbjct: 379 ggccaagtacggacgcaacgacgagctccgccacgccggcattatcaacatgcagttcaa 438
Query: 307 gagggttccctgccagtaccctggtctgacggtgaccttccac 349
|||||| || ||||||||||| || |||||||||| ||||||
Sbjct: 439 gagggtgccatgccagtacccggggttgacggtgacgttccac 481
>gb|CV054003.1|CV054003 BNEL105f8 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL105f8 5' similar to Oryza sativa
beta-expansin, mRNA sequence
Length = 702
Score = 196 bits (99), Expect = 9e-049
Identities = 352/435 (80%), Gaps = 6/435 (1%)
Strand = Plus / Plus
Query: 13 cggcggcgcgtgcggcttcaagggcgtgaacatgccacctttctcggcgatgacgtcgtg 72
||||||||||||||| |||||| ||| ||| ||||||| ||||| | ||||| || ||
Sbjct: 179 cggcggcgcgtgcgggttcaagaacgtcaacttgccacccttctcctccatgacctcctg 238
Query: 73 cggcaacgagccaatcttcaaggacggcaaaggatgcgggtcctgctaccagatccggtg 132
||||||| | || |||||||||||||||| || ||||| |||||||||||||| ||||
Sbjct: 239 cggcaaccaaccgctcttcaaggacggcaagggctgcggctcctgctaccagataaggtg 298
Query: 133 c---aa---ggcccaccctgcgtgctccggcgtggcggagacggtgatcatcacggacat 186
| || || |||||||||||||||||| ||| | |||||||||||||||| |||||
Sbjct: 299 cttaaactcggaccaccctgcgtgctccggtgtgcccaagacggtgatcatcacagacat 358
Query: 187 gaactactacccggtggccccctaccacttcgacctgagcggcactgccttcggggccat 246
||||||| ||||||| ||| ||||||||||||||| || ||||| |||||||| |||||
Sbjct: 359 gaactacgacccggtctcccgctaccacttcgacctcagtggcaccgccttcggagccat 418
Query: 247 ggcaaaagacgagcacaacgacgagctaaggcacgcaggaatcatcgacatccagttcaa 306
||| || ||| | |||||||||||| | ||||| || || ||| |||| ||||||||
Sbjct: 419 ggccaagtacggacgcaacgacgagctccgccacgccggcattatcaacatgcagttcaa 478
Query: 307 gagggttccctgccagtaccctggtctgacggtgaccttccacatcgagcgcggctccaa 366
|||||| || ||||||||||| || |||||||||| |||||| | ||| || || ||
Sbjct: 479 gagggtgccgtgccagtacccggggttgacggtgacgttccacgtggaggaggggtcgaa 538
Query: 367 ccccaactacctggcggtgctggtggagtacgagaacggcgacggcgacgtggtgcaggt 426
||| |||| |||| | ||||||||||||||||| || || ||||| ||| |||| |
Sbjct: 539 cccgttctacatggcaatcctggtggagtacgagaatggagatggcgatgtgaagcagct 598
Query: 427 ggacctgatggagtc 441
|||| | ||||||||
Sbjct: 599 ggacataatggagtc 613
>gb|CV054400.1|CV054400 BNEL10B12 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL10B12 5' similar to Oryza sativa
beta-expansin, mRNA sequence
Length = 533
Score = 196 bits (99), Expect = 9e-049
Identities = 283/343 (82%), Gaps = 6/343 (1%)
Strand = Plus / Plus
Query: 13 cggcggcgcgtgcggcttcaagggcgtgaacatgccacctttctcggcgatgacgtcgtg 72
||||||||||||||| |||||| ||| ||| ||||||| ||||| | ||||| || ||
Sbjct: 179 cggcggcgcgtgcgggttcaagaacgtcaacttgccacccttctcctccatgacctcctg 238
Query: 73 cggcaacgagccaatcttcaaggacggcaaaggatgcgggtcctgctaccagatccggtg 132
||||||| | || |||||||||||||||| || ||||| |||||||||||||| ||||
Sbjct: 239 cggcaaccaaccgctcttcaaggacggcaagggctgcggctcctgctaccagataaggtg 298
Query: 133 c---aa---ggcccaccctgcgtgctccggcgtggcggagacggtgatcatcacggacat 186
| || || |||||||||||||||||| ||| | |||||||||||||||| |||||
Sbjct: 299 cttaaactcggaccaccctgcgtgctccggtgtgcccaagacggtgatcatcacagacat 358
Query: 187 gaactactacccggtggccccctaccacttcgacctgagcggcactgccttcggggccat 246
||||||| ||||||| ||| ||||||||||||||| || ||||| |||||||| |||||
Sbjct: 359 gaactacgacccggtctcccgctaccacttcgacctcagtggcaccgccttcggagccat 418
Query: 247 ggcaaaagacgagcacaacgacgagctaaggcacgcaggaatcatcgacatccagttcaa 306
||| || ||| | |||||||||||| | ||||| || || ||| |||| ||||||||
Sbjct: 419 ggccaagtacggacgcaacgacgagctccgccacgccggcattatcaacatgcagttcaa 478
Query: 307 gagggttccctgccagtaccctggtctgacggtgaccttccac 349
|||||| || ||||||||||| || |||||||||| ||||||
Sbjct: 479 gagggtgccgtgccagtacccggggttgacggtgacgttccac 521
>gb|CV063456.1|CV063456 BNEL8E2 Barley EST endosperm library Hordeum vulgare subsp. vulgare
cDNA clone BNEL8E2 5' similar to Oryza sativa
beta-expansin, mRNA sequence
Length = 546
Score = 196 bits (99), Expect = 9e-049
Identities = 283/343 (82%), Gaps = 6/343 (1%)
Strand = Plus / Plus
Query: 13 cggcggcgcgtgcggcttcaagggcgtgaacatgccacctttctcggcgatgacgtcgtg 72
||||||||||||||| |||||| ||| ||| ||||||| ||||| | ||||| || ||
Sbjct: 177 cggcggcgcgtgcgggttcaagaacgtcaacttgccacccttctcctccatgacctcctg 236
Query: 73 cggcaacgagccaatcttcaaggacggcaaaggatgcgggtcctgctaccagatccggtg 132
||||||| | || |||||||||||||||| || ||||| |||||||||||||| ||||
Sbjct: 237 cggcaaccaaccgctcttcaaggacggcaagggctgcggctcctgctaccagataaggtg 296
Query: 133 c---aa---ggcccaccctgcgtgctccggcgtggcggagacggtgatcatcacggacat 186
| || || |||||||||||||||||| ||| | |||||||||||||||| |||||
Sbjct: 297 cttaaactcggaccaccctgcgtgctccggtgtgcccaagacggtgatcatcacagacat 356
Query: 187 gaactactacccggtggccccctaccacttcgacctgagcggcactgccttcggggccat 246
||||||| ||||||| ||| ||||||||||||||| || ||||| |||||||| |||||
Sbjct: 357 gaactacgacccggtctcccgctaccacttcgacctcagtggcaccgccttcggagccat 416
Query: 247 ggcaaaagacgagcacaacgacgagctaaggcacgcaggaatcatcgacatccagttcaa 306
||| || ||| | |||||||||||| | ||||| || || ||| |||| ||||||||
Sbjct: 417 ggccaagtacggacgcaacgacgagctccgccacgccggcattatcaacatgcagttcaa 476
Query: 307 gagggttccctgccagtaccctggtctgacggtgaccttccac 349
|||||| || ||||||||||| || |||||||||| ||||||
Sbjct: 477 gagggtgccgtgccagtacccggggttgacggtgacgttccac 519
>gb|CB883447.1|CB883447 HQ02E17w HQ Hordeum vulgare subsp. vulgare cDNA clone HQ02E17
3-PRIME, mRNA sequence
Length = 547
Score = 194 bits (98), Expect = 4e-048
Identities = 238/285 (83%)
Strand = Plus / Plus
Query: 123 agatccggtgcaaggcccaccctgcgtgctccggcgtggcggagacggtgatcatcacgg 182
||||| ||||| |||||| | ||| ||||||||||| |||| ||||||||||||||||
Sbjct: 263 agatcaggtgcgtggcccatcgtgcctgctccggcgtcccggaaacggtgatcatcacgg 322
Query: 183 acatgaactactacccggtggccccctaccacttcgacctgagcggcactgccttcgggg 242
||||||||||||||||||| ||| ||| || || ||||| |||||||| |||||||| |
Sbjct: 323 acatgaactactacccggtctcccgctatcattttgacctcagcggcaccgccttcggtg 382
Query: 243 ccatggcaaaagacgagcacaacgacgagctaaggcacgcaggaatcatcgacatccagt 302
||||||| || ||| | |||||||||||| | ||||| || ||||||||||| ||||
Sbjct: 383 ccatggccaagtacggccgcaacgacgagctccgccacgctggcatcatcgacatgcagt 442
Query: 303 tcaagagggttccctgccagtaccctggtctgacggtgaccttccacatcgagcgcggct 362
|||||||||| || ||||||||||| || || |||||||| |||| | | ||| ||| |
Sbjct: 443 tcaagagggtgccgtgccagtacccggggctcacggtgacgttccgcgtgcagcacgggt 502
Query: 363 ccaaccccaactacctggcggtgctggtggagtacgagaacggcg 407
| ||||||||||||||||| | ||||||||||||||| ||||||
Sbjct: 503 cncaccccaactacctggcgatcctggtggagtacgaggacggcg 547
>gb|CV063939.1|CV063939 BNEL94h5 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL94h5 5' similar to Oryza sativa
beta-expansin, mRNA sequence
Length = 661
Score = 192 bits (97), Expect = 1e-047
Identities = 283/344 (82%), Gaps = 7/344 (2%)
Strand = Plus / Plus
Query: 13 cggcggcgcgtgcggcttcaagggcgtgaacatgccacctttctcggcgatgacgtcgtg 72
||||||||||||||| |||||| ||| ||| ||||||| ||||| | ||||| || ||
Sbjct: 177 cggcggcgcgtgcgggttcaagaacgtcaacttgccacccttctcctccatgacctcctg 236
Query: 73 cggcaacgagccaatcttcaaggacggcaaaggatgcgggtcctgctaccagatccggtg 132
||||||| | || |||||||||||||||| || ||||| |||||||||||||| ||||
Sbjct: 237 cggcaaccaaccgctcttcaaggacggcaagggctgcggctcctgctaccagataaggtg 296
Query: 133 c--aa-----ggcccaccctgcgtgctccggcgtggcggagacggtgatcatcacggaca 185
| || || |||||||||||||||||| ||| | |||||||||||||||| ||||
Sbjct: 297 cttaanactcggaccaccctgcgtgctccggtgtgcccaagacggtgatcatcacagaca 356
Query: 186 tgaactactacccggtggccccctaccacttcgacctgagcggcactgccttcggggcca 245
|||||||| ||||||| ||| ||||||||||||||| || ||||| |||||||| ||||
Sbjct: 357 tgaactacgacccggtctcccgctaccacttcgacctcagtggcaccgccttcggagcca 416
Query: 246 tggcaaaagacgagcacaacgacgagctaaggcacgcaggaatcatcgacatccagttca 305
|||| || ||| | |||||||||||| | ||||| || || ||| |||| |||||||
Sbjct: 417 tggccaagtacggacgcaacgacgagctccgccacgccggcattatcaacatgcagttca 476
Query: 306 agagggttccctgccagtaccctggtctgacggtgaccttccac 349
||||||| || ||||||||||| || |||||||||| ||||||
Sbjct: 477 agagggtgccgtgccagtacccggggttgacggtgacgttccac 520
>gb|CV060611.1|CV060611 BNEL5B4 Barley EST endosperm library Hordeum vulgare subsp. vulgare
cDNA clone BNEL5B4 5' similar to Oryza sativa
beta-expansin, mRNA sequence
Length = 634
Score = 190 bits (96), Expect = 6e-047
Identities = 277/336 (82%), Gaps = 6/336 (1%)
Strand = Plus / Plus
Query: 13 cggcggcgcgtgcggcttcaagggcgtgaacatgccacctttctcggcgatgacgtcgtg 72
||||||||||||||| |||||| ||| ||| ||||||| ||||| | ||||| || ||
Sbjct: 179 cggcggcgcgtgcgggttcaagaacgtcaacttgccacccttctcctccatgacctcctg 238
Query: 73 cggcaacgagccaatcttcaaggacggcaaaggatgcgggtcctgctaccagatccggtg 132
||||||| | || |||||||||||||||| || ||||| |||||||||||||| ||||
Sbjct: 239 cggcaaccaaccgctcttcaaggacggcaagggctgcggctcctgctaccagataaggtg 298
Query: 133 c---aa---ggcccaccctgcgtgctccggcgtggcggagacggtgatcatcacggacat 186
| || || |||||||||||||||||| ||| | |||||||||||||||| |||||
Sbjct: 299 cttaaactcggaccaccctgcgtgctccggtgtgcccaagacggtgatcatcacagacat 358
Query: 187 gaactactacccggtggccccctaccacttcgacctgagcggcactgccttcggggccat 246
||||||| ||||||| ||| ||||||||||||||| || ||||| |||||||| |||||
Sbjct: 359 gaactacgacccggtctcccgctaccacttcgacctcagtggcaccgccttcggagccat 418
Query: 247 ggcaaaagacgagcacaacgacgagctaaggcacgcaggaatcatcgacatccagttcaa 306
||| || ||| | |||||||||||| | ||||| || || ||| |||| ||||||||
Sbjct: 419 ggccaagtacggacgcaacgacgagctccgccacgccggcattatcaacatgcagttcaa 478
Query: 307 gagggttccctgccagtaccctggtctgacggtgac 342
|||||| || ||||||||||| || ||||||||||
Sbjct: 479 gagggtgccgtgccagtacccggggttgacggtgac 514
>gb|CV061225.1|CV061225 BNEL66d10 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL66d10 5' similar to Oryza sativa
beta-expansin, mRNA sequence
Length = 539
Score = 190 bits (96), Expect = 6e-047
Identities = 282/343 (82%), Gaps = 6/343 (1%)
Strand = Plus / Plus
Query: 13 cggcggcgcgtgcggcttcaagggcgtgaacatgccacctttctcggcgatgacgtcgtg 72
||||||||||||||| |||||| ||| ||| ||||||| ||||| | ||||| || ||
Sbjct: 177 cggcggcgcgtgcgggttcaagaacgtcaacttgccacccttctcctccatgacctcctg 236
Query: 73 cggcaacgagccaatcttcaaggacggcaaaggatgcgggtcctgctaccagatccggtg 132
||||||| | || |||||||||||||||| || ||||| |||||||||||||| ||||
Sbjct: 237 cggcaaccaaccgctcttcaaggacggcaagggctgcggctcctgctaccagataaggtg 296
Query: 133 c---aa---ggcccaccctgcgtgctccggcgtggcggagacggtgatcatcacggacat 186
| || || |||||||||||||||||| ||| | |||||||||||||||| |||||
Sbjct: 297 cttaaactcggaccaccctgcgtgctccggtgtgcccaagacggtgatcatcacagacat 356
Query: 187 gaactactacccggtggccccctaccacttcgacctgagcggcactgccttcggggccat 246
||||||| ||||||| ||| ||||||||||||||| || ||||| |||||||| |||||
Sbjct: 357 gaactacgacccggtctcccgctaccacttcgacctcagtggcaccgccttcggagccat 416
Query: 247 ggcaaaagacgagcacaacgacgagctaaggcacgcaggaatcatcgacatccagttcaa 306
||| || ||| | |||||||||||| | ||||| || || ||| |||| ||||||||
Sbjct: 417 ggccaagtacggacgcaacgacgagctccgccacgccggcattatcaacatgcagttcaa 476
Query: 307 gagggttccctgccagtaccctggtctgacggtgaccttccac 349
|||||| || ||||||||||| | |||||||||| ||||||
Sbjct: 477 gagggtgccgtgccagtacccggngttgacggtgacgttccac 519
>gb|CV063217.1|CV063217 BNEL87h3 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL87h3 5' similar to Oryza sativa
beta-expansin, mRNA sequence
Length = 701
Score = 190 bits (96), Expect = 6e-047
Identities = 351/435 (80%), Gaps = 6/435 (1%)
Strand = Plus / Plus
Query: 13 cggcggcgcgtgcggcttcaagggcgtgaacatgccacctttctcggcgatgacgtcgtg 72
||||||||||||||| |||||| ||| ||| ||||||| ||||| | ||||| || ||
Sbjct: 185 cggcggcgcgtgcgggttcaagaacgtcaacttgccacccttctcctccatgacctcctg 244
Query: 73 cggcaacgagccaatcttcaaggacggcaaaggatgcgggtcctgctaccagatccggtg 132
||||||| | || |||||||||||||||| || ||||| |||||||||||||| ||||
Sbjct: 245 cggcaaccaaccgctcttcaaggacggcaagggctgcggctcctgctaccagataaggtg 304
Query: 133 c---aa---ggcccaccctgcgtgctccggcgtggcggagacggtgatcatcacggacat 186
| || || |||||||||||||||||| ||| | |||||||||||||||| |||||
Sbjct: 305 cttaaactcggaccaccctgcgtgctccggtgtgcccaagacggtgatcatcacagacat 364
Query: 187 gaactactacccggtggccccctaccacttcgacctgagcggcactgccttcggggccat 246
||||||| ||||||| ||| ||||||||||||||| || ||||| |||||||| |||||
Sbjct: 365 gaactacgacccggtctcccgctaccacttcgacctcagtggcaccgccttcggagccat 424
Query: 247 ggcaaaagacgagcacaacgacgagctaaggcacgcaggaatcatcgacatccagttcaa 306
||| || ||| | |||||||||||| | ||||| || || ||| |||| ||||||||
Sbjct: 425 ggccaagtacggacgcaacgacgagctccgccacgccggcattatcaacatgcagttcaa 484
Query: 307 gagggttccctgccagtaccctggtctgacggtgaccttccacatcgagcgcggctccaa 366
|||||| || ||||||||||| | |||||||||| |||||| | ||| || || ||
Sbjct: 485 gagggtgccgtgccagtacccggngttgacggtgacgttccacgtggaggaggggtcgaa 544
Query: 367 ccccaactacctggcggtgctggtggagtacgagaacggcgacggcgacgtggtgcaggt 426
||| |||| |||| | ||||||||||||||||| || || ||||| ||| |||| |
Sbjct: 545 cccgttctacatggcaatcctggtggagtacgagaatggagatggcgatgtgaagcagct 604
Query: 427 ggacctgatggagtc 441
|||| | ||||||||
Sbjct: 605 ggacataatggagtc 619
>gb|BQ458429.1|BQ458429 HA05E07r HA Hordeum vulgare subsp. vulgare cDNA clone HA05E07
5-PRIME, mRNA sequence
Length = 504
Score = 188 bits (95), Expect = 2e-046
Identities = 282/343 (82%), Gaps = 6/343 (1%)
Strand = Plus / Plus
Query: 13 cggcggcgcgtgcggcttcaagggcgtgaacatgccacctttctcggcgatgacgtcgtg 72
||||||||||||||| |||||| ||| ||| ||||||| ||||| | ||||| || ||
Sbjct: 70 cggcggcgcgtgcgggttcaagaacgtcaacttgccacccttctcctccatgacctcctg 129
Query: 73 cggcaacgagccaatcttcaaggacggcaaaggatgcgggtcctgctaccagatccggtg 132
||||||| | || |||||||||||||||| || ||||| |||||||||||||| ||||
Sbjct: 130 cggcaaccaaccgctcttcaaggacggcaagggctgcggctcctgctaccagataaggtg 189
Query: 133 c---aa---ggcccaccctgcgtgctccggcgtggcggagacggtgatcatcacggacat 186
| || || |||||||||||||||||| ||| || ||||||||||||| || |||||
Sbjct: 190 cttaaactcggaccaccctgcgtgctccggtgtgccgaagacggtgatcataacagacat 249
Query: 187 gaactactacccggtggccccctaccacttcgacctgagcggcactgccttcggggccat 246
||||||| |||| || ||| ||||||||||||||| || ||||| |||||||| |||||
Sbjct: 250 gaactacgacccagtctcccgctaccacttcgacctcagtggcaccgccttcggagccat 309
Query: 247 ggcaaaagacgagcacaacgacgagctaaggcacgcaggaatcatcgacatccagttcaa 306
||| || ||| | |||||||||||| | ||||| || || ||| |||| ||||||||
Sbjct: 310 ggccaagtacggacgcaacgacgagctccgccacgccggcattatcaacatgcagttcaa 369
Query: 307 gagggttccctgccagtaccctggtctgacggtgaccttccac 349
|||||| || ||||||||||| || |||||||||| ||||||
Sbjct: 370 gagggtgccgtgccagtacccggggttgacggtgacgttccac 412
>gb|BU981055.1|BU981055 HA22I03r HA Hordeum vulgare subsp. vulgare cDNA clone HA22I03
5-PRIME, mRNA sequence
Length = 597
Score = 188 bits (95), Expect = 2e-046
Identities = 282/343 (82%), Gaps = 6/343 (1%)
Strand = Plus / Plus
Query: 13 cggcggcgcgtgcggcttcaagggcgtgaacatgccacctttctcggcgatgacgtcgtg 72
||||||||||||||| |||||| ||| ||| ||||||| ||||| | ||||| || ||
Sbjct: 132 cggcggcgcgtgcgggttcaagaacgtcaacttgccacccttctcctccatgacctcctg 191
Query: 73 cggcaacgagccaatcttcaaggacggcaaaggatgcgggtcctgctaccagatccggtg 132
||||||| | || |||||||||||||||| || ||||| |||||||||||||| ||||
Sbjct: 192 cggcaaccaaccgctcttcaaggacggcaagggctgcggctcctgctaccagataaggtg 251
Query: 133 c---aa---ggcccaccctgcgtgctccggcgtggcggagacggtgatcatcacggacat 186
| || || |||||||||||||||||| ||| || ||||||||||||| || |||||
Sbjct: 252 cttaaactcggaccaccctgcgtgctccggtgtgccgaagacggtgatcataacagacat 311
Query: 187 gaactactacccggtggccccctaccacttcgacctgagcggcactgccttcggggccat 246
||||||| |||| || ||| ||||||||||||||| || ||||| |||||||| |||||
Sbjct: 312 gaactacgacccagtctcccgctaccacttcgacctcagtggcaccgccttcggagccat 371
Query: 247 ggcaaaagacgagcacaacgacgagctaaggcacgcaggaatcatcgacatccagttcaa 306
||| || ||| | |||||||||||| | ||||| || || ||| |||| ||||||||
Sbjct: 372 ggccaagtacggacgcaacgacgagctccgccacgccggcattatcaacatgcagttcaa 431
Query: 307 gagggttccctgccagtaccctggtctgacggtgaccttccac 349
|||||| || ||||||||||| || |||||||||| ||||||
Sbjct: 432 gagggtgccgtgccagtacccggggttgacggtgacgttccac 474
>gb|BI956772.1|BI956772 HVSMEn0005E06f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0005E06f, mRNA sequence
Length = 796
Score = 186 bits (94), Expect = 9e-046
Identities = 299/368 (81%)
Strand = Plus / Plus
Query: 72 gcggcaacgagccaatcttcaaggacggcaaaggatgcgggtcctgctaccagatccggt 131
|||||||| |||| ||||||||||| ||||| |||||||| |||||||||||||| ||||
Sbjct: 185 gcggcaacnagcccatcttcaaggatggcaagggatgcggctcctgctaccagatacggt 244
Query: 132 gcaaggcccaccctgcgtgctccggcgtggcggagacggtgatcatcacggacatgaact 191
||| | ||| | ||||||||| ||||||||||| ||||||| ||||||||||
Sbjct: 245 gcaccaacgaccagtcctgctccggcaacccggagacggtggtcatcaccgacatgaact 304
Query: 192 actacccggtggccccctaccacttcgacctgagcggcactgccttcggggccatggcaa 251
|||||||||| ||| ||||||||||||||||| ||||| || ||||| |||||||| |
Sbjct: 305 actacccggttgccaagtaccacttcgacctgagtggcaccgcgttcggcgccatggcca 364
Query: 252 aagacgagcacaacgacgagctaaggcacgcaggaatcatcgacatccagttcaagaggg 311
| || | || ||| |||| ||||| | || ||||||||||||||||||||||| |
Sbjct: 365 agcccggcctcagcgagaagctccggcactccggcatcatcgacatccagttcaagagag 424
Query: 312 ttccctgccagtaccctggtctgacggtgaccttccacatcgagcgcggctccaacccca 371
| || ||| ||| ||||||||| | ||||||||||||| | |||| || || |||||
Sbjct: 425 tgccgtgcgagttccctggtctcaaggtgaccttccacgtggagcaggggtcgaacccgg 484
Query: 372 actacctggcggtgctggtggagtacgagaacggcgacggcgacgtggtgcaggtggacc 431
||| | || ||||||||||||||||| |||||||||||||| ||||||| |||||||
Sbjct: 485 tgtacttcgccgtgctggtggagtacgangacggcgacggcgacatggtgcaagtggacc 544
Query: 432 tgatggag 439
| ||||||
Sbjct: 545 tcatggag 552
>gb|BI957603.1|BI957603 HVSMEn0010F11f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0010F11f, mRNA sequence
Length = 630
Score = 186 bits (94), Expect = 9e-046
Identities = 307/378 (81%)
Strand = Plus / Plus
Query: 62 atgacgtcgtgcggcaacgagccaatcttcaaggacggcaaaggatgcgggtcctgctac 121
||||| ||||||||||||||||| ||||||||||| ||||| |||||||| |||||||||
Sbjct: 250 atgacatcgtgcggcaacgagcccatcttcaaggatggcaagggatgcggctcctgctac 309
Query: 122 cagatccggtgcaaggcccaccctgcgtgctccggcgtggcggagacggtgatcatcacg 181
||||| ||||||| | ||| | ||||||||| ||||||||||| |||||||
Sbjct: 310 cagatacggtgcaccaacgaccagtcctgctccggcaacccggagacggtggtcatcacc 369
Query: 182 gacatgaactactacccggtggccccctaccacttcgacctgagcggcactgccttcggg 241
|||||||||||||||||||| ||| ||||||||||||||||| ||||| || |||||
Sbjct: 370 gacatgaactactacccggttgccaagtaccacttcgacctgagtggcaccgcgttcggc 429
Query: 242 gccatggcaaaagacgagcacaacgacgagctaaggcacgcaggaatcatcgacatccag 301
|||||||| || || | || ||| |||| ||||| | || |||||||||||||||
Sbjct: 430 gccatggccaagcccggcctcagcgagaagctccggcactccggcatcatcgacatccag 489
Query: 302 ttcaagagggttccctgccagtaccctggtctgacggtgaccttccacatcgagcgcggc 361
|||||||| || || ||| ||| ||||||||| | ||||||||||||| | |||| ||
Sbjct: 490 ttcaagagagtgccgtgcgagttccctggtctcaaggtgaccttccacgtggagcagggg 549
Query: 362 tccaaccccaactacctggcggtgctggtggagtacgagaacggcgacggcgacgtggtg 421
|| ||||| ||| | | ||||||||||||||| | ||||||||||| || |||||
Sbjct: 550 tcgaacccggtgtacttccccgtgctggtggagtactaagacggcgacggcaacttggtg 609
Query: 422 caggtggacctgatggag 439
||||||||||| ||||||
Sbjct: 610 caggtggacctcatggag 627
>gb|BI960458.1|BI960458 HVSMEn0024K16f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0024K16f, mRNA sequence
Length = 677
Score = 184 bits (93), Expect = 3e-045
Identities = 304/376 (80%)
Strand = Plus / Plus
Query: 62 atgacgtcgtgcggcaacgagccaatcttcaaggacggcaaaggatgcgggtcctgctac 121
||||| ||||||||||||||||| ||||||||||| ||||| |||||||| |||||||||
Sbjct: 302 atgacatcgtgcggcaacgagcccatcttcaaggatggcaagggatgcggctcctgctac 361
Query: 122 cagatccggtgcaaggcccaccctgcgtgctccggcgtggcggagacggtgatcatcacg 181
||||| ||||||| | ||| | ||||||||| ||||||||||| |||||||
Sbjct: 362 cagatacggtgcaccaacgaccagtcctgctccggcaacccggagacggtggtcatcacc 421
Query: 182 gacatgaactactacccggtggccccctaccacttcgacctgagcggcactgccttcggg 241
|||||||||||||||||||| ||| ||||||||||||||||| ||||| || |||||
Sbjct: 422 gacatgaactactacccggttgccaagtaccacttcgacctgagtggcaccgcgttcggc 481
Query: 242 gccatggcaaaagacgagcacaacgacgagctaaggcacgcaggaatcatcgacatccag 301
|||||||| || || | || ||| |||| ||||| | || |||||||||||||||
Sbjct: 482 gccatggccaagcccggcctcagcgagaagctccggcactccggcatcatcgacatccag 541
Query: 302 ttcaagagggttccctgccagtaccctggtctgacggtgaccttccacatcgagcgcggc 361
|||||||| || || ||| ||| ||||||||| | ||||||||| ||| | |||| ||
Sbjct: 542 ttcaagagagtgccgtgcgagttccctggtctcaaggtgaccttncacgtggagcagggg 601
Query: 362 tccaaccccaactacctggcggtgctggtggagtacgagaacggcgacggcgacgtggtg 421
|| ||||| ||| | | ||||||||||||||| || |||||||| | ||| |||||
Sbjct: 602 tcgaacccggtgtacttcnccgtgctggtggagtacnaggacggcgacngggacntggtg 661
Query: 422 caggtggacctgatgg 437
||||||||||| ||||
Sbjct: 662 caggtggacctcatgg 677
>gb|BI956858.1|BI956858 HVSMEn0005K24f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0005K24f, mRNA sequence
Length = 812
Score = 180 bits (91), Expect = 5e-044
Identities = 244/294 (82%), Gaps = 1/294 (0%)
Strand = Plus / Plus
Query: 17 ggcgcgtgcggcttcaagggcgtgaacatgccacctttctcggcgatgacgtcgtgcggc 76
||||| ||||| |||||| ||||||| |||| || ||| || |||||||||||||||
Sbjct: 98 ggcgcatgcgggttcaagaacgtgaacctgccgccgttcaacgccatgacgtcgtgcggc 157
Query: 77 aacgagccaatcttcaaggacggcaaaggatgcgggtcctgctaccagatccggtgcaag 136
|| ||||| ||||||||| || | |||||||| || ||||||||||| ||||| |
Sbjct: 158 aatgagccgctcttcaagggggggan-ggatgcggctcgtgctaccagataaggtgcgtg 216
Query: 137 gcccaccctgcgtgctccggcgtggcggagacggtgatcatcacggacatgaactactac 196
|| ||| | | ||||||||||| | ||||||||||||||||| |||||||||||||||
Sbjct: 217 gctcacgcaacctgctccggcgtccctgagacggtgatcatcaccgacatgaactactac 276
Query: 197 ccggtggccccctaccacttcgacctgagcggcactgccttcggggccatggcaaaagac 256
|||||| ||| ||||||||||||||| |||||||| |||||||| |||||||| || |||
Sbjct: 277 ccggtgtcccgctaccacttcgacctcagcggcaccgccttcggcgccatggccaaggac 336
Query: 257 gagcacaacgacgagctaaggcacgcaggaatcatcgacatccagttcaagagg 310
| || ||||||||||| | ||||| || ||||||||||| ||||||||||||
Sbjct: 337 ggccaaaacgacgagctccgccacgccggcatcatcgacatgcagttcaagagg 390
Score = 56.0 bits (28), Expect = 2e-006
Identities = 91/112 (81%)
Strand = Plus / Plus
Query: 308 agggttccctgccagtaccctggtctgacggtgaccttccacatcgagcgcggctccaac 367
||||| || ||||||||||| || || ||||||| |||||| | |||| || || |||
Sbjct: 525 agggtgccgtgccagtacccggggttgtcggtgacgttccacgttgagcaggggtcgaac 584
Query: 368 cccaactacctggcggtgctggtggagtacgagaacggcgacggcgacgtgg 419
|| |||||||||||| | | |||||||||| |||||| |||||||| ||||
Sbjct: 585 ccgaactacctggcgatccctgtggagtacgggaacggtgacggcgatgtgg 636
>gb|BI959353.1|BI959353 HVSMEn0019F12f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0019F12f, mRNA sequence
Length = 669
Score = 176 bits (89), Expect = 8e-043
Identities = 300/369 (81%), Gaps = 1/369 (0%)
Strand = Plus / Plus
Query: 62 atgacgtcgtgcggcaacgagccaatcttcaaggacggcaaaggatgcgggtcctgctac 121
||||| ||||||||||||||||| ||||||||||| ||||| |||||||| |||||||||
Sbjct: 302 atgacatcgtgcggcaacgagcccatcttcaaggatggcaagggatgcggctcctgctac 361
Query: 122 cagatccggtgcaaggcccaccctgcgtgctccggcgtggcggagacggtgatcatcacg 181
||||| ||||||| | ||| | ||||||||| ||||||||||| |||||||
Sbjct: 362 cagatacggtgcaccaacgaccagtcctgctccggcaacccggagacggtggtcatcacc 421
Query: 182 gacatgaactactacccggtggccccctaccacttcgacctgagcggcactgccttcggg 241
|||||||||||||||||||| ||| ||||||||||||||||| ||||| || |||||
Sbjct: 422 gacatgaactactacccggttgccaagtaccacttcgacctgagtggcaccgcgttcggc 481
Query: 242 gccatggcaaaagacgagcacaacgacgagctaaggcacgcaggaatcatcgacatccag 301
|||||||| || || | || ||| |||| ||||| | || |||||||||||||||
Sbjct: 482 gccatggccaagcccggcctcagcgagaagctccggcactccggcatcatcgacatccag 541
Query: 302 ttcaagagggttccctgccagtaccctggtctgacggtgaccttccacatcgagcgcggc 361
|||||||| || || ||| ||| ||||||||| | |||||||||||| | |||| ||
Sbjct: 542 ttcaagagagtgccgtgcgagttccctggtctca-agtgaccttccacgtggagcagggg 600
Query: 362 tccaaccccaactacctggcggtgctggtggagtacgagaacggcgacggcgacgtggtg 421
|| ||||| ||| | || ||||||||||||||| || ||||||||||| ||||||||
Sbjct: 601 tcgaacccggtgtacttcgccgtgctggtggagtaccaggacggcgacggccacgtggtg 660
Query: 422 caggtggac 430
|| ||||||
Sbjct: 661 caagtggac 669
>gb|BU981754.1|BU981754 HA24I17r HA Hordeum vulgare subsp. vulgare cDNA clone HA24I17
5-PRIME, mRNA sequence
Length = 495
Score = 172 bits (87), Expect = 1e-041
Identities = 262/319 (82%), Gaps = 6/319 (1%)
Strand = Plus / Plus
Query: 13 cggcggcgcgtgcggcttcaagggcgtgaacatgccacctttctcggcgatgacgtcgtg 72
||||||||||||||| |||||| ||| ||| ||||||| ||||| | ||||| || ||
Sbjct: 177 cggcggcgcgtgcgggttcaagaacgtcaacttgccacccttctcctccatgacctcctg 236
Query: 73 cggcaacgagccaatcttcaaggacggcaaaggatgcgggtcctgctaccagatccggtg 132
||||||| | || |||||||||||||||| || ||||| |||||||||||||| ||||
Sbjct: 237 cggcaaccaaccgctcttcaaggacggcaagggctgcggctcctgctaccagataaggtg 296
Query: 133 c---aa---ggcccaccctgcgtgctccggcgtggcggagacggtgatcatcacggacat 186
| || || |||||||||||||||||| ||| || ||||||||||||| || |||||
Sbjct: 297 cttaaactcggaccaccctgcgtgctccggtgtgccgaagacggtgatcataacagacat 356
Query: 187 gaactactacccggtggccccctaccacttcgacctgagcggcactgccttcggggccat 246
||||||| |||| || ||| ||||||||||||||| || ||||| |||||||| |||||
Sbjct: 357 gaactacgacccagtctcccgctaccacttcgacctcagtggcaccgccttcggagccat 416
Query: 247 ggcaaaagacgagcacaacgacgagctaaggcacgcaggaatcatcgacatccagttcaa 306
||| || ||| | |||||||||||| | ||||| || || ||| |||| ||||||||
Sbjct: 417 ggccaagtacggacgcaacgacgagctccgccacgccggcattatcaacatgcagttcaa 476
Query: 307 gagggttccctgccagtac 325
|||||| || |||||||||
Sbjct: 477 gagggtgccgtgccagtac 495
>gb|CV060955.1|CV060955 BNEL63c5 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL63c5 5' similar to Oryza sativa
beta-expansin, mRNA sequence
Length = 634
Score = 168 bits (85), Expect = 2e-040
Identities = 281/344 (81%), Gaps = 7/344 (2%)
Strand = Plus / Plus
Query: 13 cggcggcgcgtgcggcttcaagggcgtgaacatgccacctttctcggcgatgacgtcgtg 72
||||||||||||||| |||||| ||| ||| ||||||| ||||| | ||||| || ||
Sbjct: 121 cggcggcgcgtgcgggttcaagaacgtcaacttgccacccttctcctccatgacctcctg 180
Query: 73 cggcaacgagccaatcttcaaggacggcaaaggatgcgggtcctgctaccagatccggtg 132
||||||| | || |||||||||||||||| || ||||| |||||||||||||| ||||
Sbjct: 181 cggcaaccaaccgctcttcaaggacggcaagggctgcggctcctgctaccagataaggtg 240
Query: 133 c---aa---ggcccaccctgcgtgctccggcgtggcggagacggtgatcatcacggacat 186
| || || |||||||||||||||||| ||| | |||||||||||||||| |||||
Sbjct: 241 cttaaactcggaccaccctgcgtgctccggtgtgcccaagacggtgatcatcacagacat 300
Query: 187 gaactactacccggtggccccctaccacttcgacctgagcggca-ctgccttcggggcca 245
||||||| ||||||| ||| ||||||||||||||| || |||| | |||||||| | ||
Sbjct: 301 gaactacgacccggtctcccgctaccacttcgacctcagtggcacccgccttcggaggca 360
Query: 246 tggcaaaagacgagcacaacgacgagctaaggcacgcaggaatcatcgacatccagttca 305
|||| || ||| | |||||||||||| | ||||| || || ||| |||| |||||||
Sbjct: 361 tggccaagtacggacgcaacgacgagctccgccacgccggcattatcaacatgcagttca 420
Query: 306 agagggttccctgccagtaccctggtctgacggtgaccttccac 349
||||||| || ||||||||||| | |||||||||| ||||||
Sbjct: 421 agagggtgccgtgccagtacccggngttgacggtgacgttccac 464
>gb|BI959698.1|BI959698 HVSMEn0020N13f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0020N13f, mRNA sequence
Length = 630
Score = 167 bits (84), Expect = 8e-040
Identities = 237/288 (82%)
Strand = Plus / Plus
Query: 62 atgacgtcgtgcggcaacgagccaatcttcaaggacggcaaaggatgcgggtcctgctac 121
||||| ||||||||||||||||| ||||||||||| ||||| |||||||| |||||||||
Sbjct: 297 atgacatcgtgcggcaacgagcccatcttcaaggatggcaagggatgcggctcctgctac 356
Query: 122 cagatccggtgcaaggcccaccctgcgtgctccggcgtggcggagacggtgatcatcacg 181
||||| ||||||| | ||| | ||||||||| ||||||||||| |||||||
Sbjct: 357 cagatacggtgcaccaacgaccagtcctgctccggcaacccggagacggtggtcatcacc 416
Query: 182 gacatgaactactacccggtggccccctaccacttcgacctgagcggcactgccttcggg 241
|||||||||||||||||||| ||| ||||||||||||||||| ||||| || |||||
Sbjct: 417 gacatgaactactacccggttgccaagtaccacttcgacctgagtggcaccgcgttcggc 476
Query: 242 gccatggcaaaagacgagcacaacgacgagctaaggcacgcaggaatcatcgacatccag 301
|||||||| || || | || ||| |||| ||||| | || |||||||||||||||
Sbjct: 477 gccatggccaagcccggcctcagcgagaagctccggcactccggcatcatcgacatccag 536
Query: 302 ttcaagagggttccctgccagtaccctggtctgacggtgaccttccac 349
|||||||| || || ||| ||| ||||||||| | |||||||||||||
Sbjct: 537 ttcaagagagtgccgtgcgagttccctggtctcaaggtgaccttccac 584
>gb|BQ760850.1|BQ760850 EBro03_SQ003_K11_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ003_K11 5', mRNA sequence
Length = 204
Score = 167 bits (84), Expect = 8e-040
Identities = 168/196 (85%)
Strand = Plus / Plus
Query: 132 gcaaggcccaccctgcgtgctccggcgtggcggagacggtgatcatcacggacatgaact 191
||||||| ||||| || ||||||||||| | |||||||||||||||| |||||||||||
Sbjct: 3 gcaaggctcacccggcctgctccggcgtccccgagacggtgatcatcatggacatgaact 62
Query: 192 actacccggtggccccctaccacttcgacctgagcggcactgccttcggggccatggcaa 251
|||||||||| |||| ||||||||||||||| |||||||| |||||||| |||||||| |
Sbjct: 63 actacccggtcgcccgctaccacttcgacctcagcggcaccgccttcggcgccatggcca 122
Query: 252 aagacgagcacaacgacgagctaaggcacgcaggaatcatcgacatccagttcaagaggg 311
| || | | |||||||||||| | || || || ||||||||||| |||||||||||||
Sbjct: 123 aggagggccgcaacgacgagctccgccatgctgggatcatcgacatgcagttcaagaggg 182
Query: 312 ttccctgccagtaccc 327
| || ||| |||||||
Sbjct: 183 tgccgtgcgagtaccc 198
>gb|BU995090.1|BU995090 HM09C23r HM Hordeum vulgare subsp. vulgare cDNA clone HM09C23
5-PRIME, mRNA sequence
Length = 653
Score = 167 bits (84), Expect = 8e-040
Identities = 279/344 (81%)
Strand = Plus / Plus
Query: 62 atgacgtcgtgcggcaacgagccaatcttcaaggacggcaaaggatgcgggtcctgctac 121
||||| ||||||||||||||||| ||||||||||| ||||| |||||||| |||||||||
Sbjct: 310 atgacatcgtgcggcaacgagcccatcttcaaggatggcaagggatgcggctcctgctac 369
Query: 122 cagatccggtgcaaggcccaccctgcgtgctccggcgtggcggagacggtgatcatcacg 181
||||| ||||||| | ||| | ||||||||| ||||||||||| |||||||
Sbjct: 370 cagatacggtgcaccaacgaccagtcctgctccggcaacccggagacggtggtcatcacc 429
Query: 182 gacatgaactactacccggtggccccctaccacttcgacctgagcggcactgccttcggg 241
|||||||||||||||||||| ||| ||||||||||||||||| ||||| || |||||
Sbjct: 430 gacatgaactactacccggttgccaagtaccacttcgacctgagtggcaccgcgttcggc 489
Query: 242 gccatggcaaaagacgagcacaacgacgagctaaggcacgcaggaatcatcgacatccag 301
|||||||| || || | || ||| |||| ||||| | || |||||||||||||||
Sbjct: 490 gccatggccaagcccggcctcagcgagaagctccggcactccggcatcatcgacatccag 549
Query: 302 ttcaagagggttccctgccagtaccctggtctgacggtgaccttccacatcgagcgcggc 361
|||||||| || || ||| ||| ||||||||| | ||||||||||||| | |||| ||
Sbjct: 550 ttcaagagagtgccgtgcgagttccctggtctcaaggtgaccttccacgtggagcagggg 609
Query: 362 tccaaccccaactacctggcggtgctggtggagtacgagaacgg 405
|| ||||| ||| | || |||||||||||||||||| ||||
Sbjct: 610 tcgaacccggtgtacttcgccgtgctggtggagtacgaggacgg 653
>gb|BU967134.1|BU967134 HB03G05r BC Hordeum vulgare subsp. vulgare cDNA clone HB03G05
5-PRIME, mRNA sequence
Length = 430
Score = 161 bits (81), Expect = 5e-038
Identities = 223/269 (82%), Gaps = 6/269 (2%)
Strand = Plus / Plus
Query: 87 tcttcaaggacggcaaaggatgcgggtcctgctaccagatccggtgc---aa---ggccc 140
|||||||||||||||| || ||||| |||||||||||||| ||||| || || ||
Sbjct: 8 tcttcaaggacggcaagggctgcggctcctgctaccagataaggtgcttaaactcggacc 67
Query: 141 accctgcgtgctccggcgtggcggagacggtgatcatcacggacatgaactactacccgg 200
|||||||||||||||| ||| || ||||||||||||| || |||||||||||| |||| |
Sbjct: 68 accctgcgtgctccggtgtgccgaagacggtgatcataacagacatgaactacgacccag 127
Query: 201 tggccccctaccacttcgacctgagcggcactgccttcggggccatggcaaaagacgagc 260
| ||| ||||||||||||||| || ||||| |||||||| |||||||| || ||| |
Sbjct: 128 tctcccgctaccacttcgacctcagtggcaccgccttcggagccatggccaagtacggac 187
Query: 261 acaacgacgagctaaggcacgcaggaatcatcgacatccagttcaagagggttccctgcc 320
|||||||||||| | ||||| || || ||| |||| |||||||||||||| || ||||
Sbjct: 188 gcaacgacgagctccgccacgccggcattatcaacatgcagttcaagagggtgccgtgcc 247
Query: 321 agtaccctggtctgacggtgaccttccac 349
||||||| || |||||||||| ||||||
Sbjct: 248 agtacccggggttgacggtgacgttccac 276
>gb|BI959720.1|BI959720 HVSMEn0020P05f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0020P05f, mRNA sequence
Length = 615
Score = 159 bits (80), Expect = 2e-037
Identities = 236/288 (81%)
Strand = Plus / Plus
Query: 62 atgacgtcgtgcggcaacgagccaatcttcaaggacggcaaaggatgcgggtcctgctac 121
||||| ||||||||||||||||| ||||||||||| ||||| |||||||| |||||||||
Sbjct: 291 atgacatcgtgcggcaacgagcccatcttcaaggatggcaagggatgcggctcctgctac 350
Query: 122 cagatccggtgcaaggcccaccctgcgtgctccggcgtggcggagacggtgatcatcacg 181
||||| ||||||| | ||| | ||||||||| ||||||||||| |||||||
Sbjct: 351 cagatacggtgcaccaacgaccagtcctgctccggcaacccggagacggtggtcatcacc 410
Query: 182 gacatgaactactacccggtggccccctaccacttcgacctgagcggcactgccttcggg 241
|||||||||||||||||||| ||| ||||||||||||||||| ||||| || |||||
Sbjct: 411 gacatgaactactacccggttgccaagtaccacttcgacctgagtggcaccgcgttcggc 470
Query: 242 gccatggcaaaagacgagcacaacgacgagctaaggcacgcaggaatcatcgacatccag 301
|||||||| || || | || ||| |||| ||||| | || |||||||||||||||
Sbjct: 471 gccatggccaagcccggcctcagcgagaagctccggcactccggcatcatcgacatccag 530
Query: 302 ttcaagagggttccctgccagtaccctggtctgacggtgaccttccac 349
|||||||| || || ||| ||| ||||||||| | ||||||||||||
Sbjct: 531 ttcaagagagtgccgtgcgagttccctggtctcaacgtgaccttccac 578
>gb|BQ470849.1|BQ470849 HX04D14r HX Hordeum vulgare subsp. vulgare cDNA clone HX04D14
5-PRIME, mRNA sequence
Length = 606
Score = 159 bits (80), Expect = 2e-037
Identities = 152/176 (86%)
Strand = Plus / Plus
Query: 473 tgggagcccatgcgcgagtcctggggctccatatggaggatggacacccgccggccgctg 532
|||| ||||||| |||||||||||||||||| ||| ||||||||||||| || || ||
Sbjct: 188 tgggtgcccatgaccgagtcctggggctccatctggcggatggacacccggcgccccatg 247
Query: 533 caagggcccttctcgctgcgcgtcaccaacgagtccggcaagacgctggtggcggaccag 592
|| || ||||||||||||||| ||||||||||||||||||||||||| || || ||||||
Sbjct: 248 cagggccccttctcgctgcgcatcaccaacgagtccggcaagacgctcgtcgccgaccag 307
Query: 593 gtcattccggcagactggcagcccgacaacgtctacagctccatcgtccagttcga 648
||||| || || |||||| ||||| || | |||||||||||||| ||||||||||
Sbjct: 308 gtcatccccgccgactgggagcccaacgagatctacagctccatcatccagttcga 363
Score = 123 bits (62), Expect = 1e-026
Identities = 116/134 (86%)
Strand = Plus / Plus
Query: 308 agggttccctgccagtaccctggtctgacggtgaccttccacatcgagcgcggctccaac 367
||||| || ||||||||||| || ||||||||||| |||||| | ||| ||| ||||||
Sbjct: 5 agggtgccgtgccagtacccggggctgacggtgacgttccacgtgcagcacggttccaac 64
Query: 368 cccaactacctggcggtgctggtggagtacgagaacggcgacggcgacgtggtgcaggtg 427
||| |||||||||| | |||||||||||||||||||||||||||||||||| ||||||
Sbjct: 65 ccctactacctggccatcctggtggagtacgagaacggcgacggcgacgtggaccaggtg 124
Query: 428 gacctgatggagtc 441
||| ||||| ||||
Sbjct: 125 gacatgatgcagtc 138
>gb|BQ665573.1|BQ665573 HX04D14u HX Hordeum vulgare subsp. vulgare cDNA clone HX04D14
3-PRIME, mRNA sequence
Length = 472
Score = 159 bits (80), Expect = 2e-037
Identities = 152/176 (86%)
Strand = Plus / Minus
Query: 473 tgggagcccatgcgcgagtcctggggctccatatggaggatggacacccgccggccgctg 532
|||| ||||||| |||||||||||||||||| ||| ||||||||||||| || || ||
Sbjct: 419 tgggtgcccatgaccgagtcctggggctccatctggcggatggacacccggcgccccatg 360
Query: 533 caagggcccttctcgctgcgcgtcaccaacgagtccggcaagacgctggtggcggaccag 592
|| || ||||||||||||||| ||||||||||||||||||||||||| || || ||||||
Sbjct: 359 cagggccccttctcgctgcgcatcaccaacgagtccggcaagacgctcgtcgccgaccag 300
Query: 593 gtcattccggcagactggcagcccgacaacgtctacagctccatcgtccagttcga 648
||||| || || |||||| ||||| || | |||||||||||||| ||||||||||
Sbjct: 299 gtcatccccgccgactgggagcccaacgagatctacagctccatcatccagttcga 244
>gb|BI959771.1|BI959771 HVSMEn0021G03f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0021G03f, mRNA sequence
Length = 682
Score = 151 bits (76), Expect = 5e-035
Identities = 236/288 (81%), Gaps = 1/288 (0%)
Strand = Plus / Plus
Query: 62 atgacgtcgtgcggcaacgagccaatcttcaaggacggcaaaggatgcgggtcctgctac 121
||||| ||||||||||||||||| ||||||||||| ||||| |||||||| |||||||||
Sbjct: 279 atgacatcgtgcggcaacgagcccatcttcaaggatggcaagggatgcggctcctgctac 338
Query: 122 cagatccggtgcaaggcccaccctgcgtgctccggcgtggcggagacggtgatcatcacg 181
||||| ||||||| | ||| | ||||||||| ||||||||||| |||||||
Sbjct: 339 cagatacggtgcaccaacgaccagtcctgctccggcaacccggagacggtggtcatcacc 398
Query: 182 gacatgaactactacccggtggccccctaccacttcgacctgagcggcactgccttcggg 241
|||||||||||||||||||| ||| ||||||||||||||||| ||||| || |||||
Sbjct: 399 gacatgaactactacccggttgccaagtaccacttcgacctgagtggcaccgcgttcggc 458
Query: 242 gccatggcaaaagacgagcacaacgacgagctaaggcacgcaggaatcatcgacatccag 301
|||||||| || || | || ||| |||| ||||| | || |||||||||||||||
Sbjct: 459 gccatggccaagcccggcctcagcgagaagctccggcactccggcatcatcgacatccag 518
Query: 302 ttcaagagggttccctgccagtaccctggtctgacggtgaccttccac 349
|||||||| || || ||| ||| ||||||||| | | |||||||||||
Sbjct: 519 ttcaagagagtgccgtgcgagttccctggtctaaag-tgaccttccac 565
>gb|BU981183.1|BU981183 HA22N23r HA Hordeum vulgare subsp. vulgare cDNA clone HA22N23
5-PRIME, mRNA sequence
Length = 465
Score = 149 bits (75), Expect = 2e-034
Identities = 220/267 (82%), Gaps = 6/267 (2%)
Strand = Plus / Plus
Query: 13 cggcggcgcgtgcggcttcaagggcgtgaacatgccacctttctcggcgatgacgtcgtg 72
||||||||||||||| |||||| ||| ||| ||||||| ||||| | ||||| || ||
Sbjct: 171 cggcggcgcgtgcgggttcaagaacgtcaacttgccacccttctcctccatgacctcctg 230
Query: 73 cggcaacgagccaatcttcaaggacggcaaaggatgcgggtcctgctaccagatccggtg 132
||||||| | || |||||||||||||||| || ||||| |||||||||||||| ||||
Sbjct: 231 cggcaaccaaccgctcttcaaggacggcaagggctgcggctcctgctaccagataaggtg 290
Query: 133 c---aa---ggcccaccctgcgtgctccggcgtggcggagacggtgatcatcacggacat 186
| || || |||||||||||||||||| ||| || ||||||||||||| || |||||
Sbjct: 291 cttaaactcggaccaccctgcgtgctccggtgtgccgaagacggtgatcataacagacat 350
Query: 187 gaactactacccggtggccccctaccacttcgacctgagcggcactgccttcggggccat 246
||||||| |||| || ||| ||||||||||||||| || ||||| |||||||| |||||
Sbjct: 351 gaactacgacccagtctcccgctaccacttcgacctcagtggcaccgccttcggagccat 410
Query: 247 ggcaaaagacgagcacaacgacgagct 273
||| || ||| | ||||||||||||
Sbjct: 411 ggccaagtacggacgcaacgacgagct 437
>gb|CA022206.1|CA022206 HZ42H09r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ42H09
5-PRIME, mRNA sequence
Length = 567
Score = 149 bits (75), Expect = 2e-034
Identities = 222/271 (81%)
Strand = Plus / Plus
Query: 62 atgacgtcgtgcggcaacgagccaatcttcaaggacggcaaaggatgcgggtcctgctac 121
||||| ||||||||||||||||| ||||||||||| ||||| |||||||| |||||||||
Sbjct: 297 atgacatcgtgcggcaacgagcccatcttcaaggatggcaagggatgcggctcctgctac 356
Query: 122 cagatccggtgcaaggcccaccctgcgtgctccggcgtggcggagacggtgatcatcacg 181
||||| ||||||| | ||| | ||||||||| ||||||||||| |||||||
Sbjct: 357 cagatacggtgcaccaacgaccagtcctgctccggcaacccggagacggtggtcatcacc 416
Query: 182 gacatgaactactacccggtggccccctaccacttcgacctgagcggcactgccttcggg 241
|||||||||||||||||||| ||| ||||||||||||||||| ||||| || |||||
Sbjct: 417 gacatgaactactacccggttgccaagtaccacttcgacctgagtggcaccgcgttcggc 476
Query: 242 gccatggcaaaagacgagcacaacgacgagctaaggcacgcaggaatcatcgacatccag 301
|||||||| || || | || ||| |||| ||||| | || |||||||||||||||
Sbjct: 477 gccatggccaagcccggcctcagcgagaagctccggcactccggcatcatcgacatccag 536
Query: 302 ttcaagagggttccctgccagtaccctggtc 332
|||||||| || || ||| ||| ||||||||
Sbjct: 537 ttcaagagagtgccgtgcgagttccctggtc 567
>gb|BG365461.2|BG365461 HVSMEi0002M09f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0002M09f, mRNA sequence
Length = 754
Score = 145 bits (73), Expect = 3e-033
Identities = 220/269 (81%)
Strand = Plus / Plus
Query: 62 atgacgtcgtgcggcaacgagccaatcttcaaggacggcaaaggatgcgggtcctgctac 121
||||| ||||||||||||||||| ||||||||||| ||||| |||||||| |||||||||
Sbjct: 300 atgacatcgtgcggcaacgagcccatcttcaaggatggcaagggatgcggctcctgctac 359
Query: 122 cagatccggtgcaaggcccaccctgcgtgctccggcgtggcggagacggtgatcatcacg 181
||||| ||||||| | ||| | ||||||||| ||||||||||| |||||||
Sbjct: 360 cagatacggtgcaccaacgaccagtcctgctccggcaacccggagacggtggtcatcacc 419
Query: 182 gacatgaactactacccggtggccccctaccacttcgacctgagcggcactgccttcggg 241
|||||||||||||||||||| ||| ||||||||||||||||| ||||| || |||||
Sbjct: 420 gacatgaactactacccggttgccaagtaccacttcgacctgagtggcaccgcgttcggc 479
Query: 242 gccatggcaaaagacgagcacaacgacgagctaaggcacgcaggaatcatcgacatccag 301
|||||||| || || | || ||| |||| ||||| | || |||||||||||||||
Sbjct: 480 gccatggccaagcccggcctcagcgagaagctccggcactccggcatcatcgacatccag 539
Query: 302 ttcaagagggttccctgccagtaccctgg 330
|||||||| || || ||| ||| ||||||
Sbjct: 540 ttcaagagagtgccgtgcgagttccctgg 568
>gb|BG369408.2|BG369408 HVSMEi0024E17f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0024E17f, mRNA sequence
Length = 875
Score = 145 bits (73), Expect = 3e-033
Identities = 220/269 (81%)
Strand = Plus / Plus
Query: 62 atgacgtcgtgcggcaacgagccaatcttcaaggacggcaaaggatgcgggtcctgctac 121
||||| ||||||||||||||||| ||||||||||| ||||| |||||||| |||||||||
Sbjct: 288 atgacatcgtgcggcaacgagcccatcttcaaggatggcaagggatgcggctcctgctac 347
Query: 122 cagatccggtgcaaggcccaccctgcgtgctccggcgtggcggagacggtgatcatcacg 181
||||| ||||||| | ||| | ||||||||| ||||||||||| |||||||
Sbjct: 348 cagatacggtgcaccaacgaccagtcctgctccggcaacccggagacggtggtcatcacc 407
Query: 182 gacatgaactactacccggtggccccctaccacttcgacctgagcggcactgccttcggg 241
|||||||||||||||||||| ||| ||||||||||||||||| ||||| || |||||
Sbjct: 408 gacatgaactactacccggttgccaagtaccacttcgacctgagtggcaccgcgttcggc 467
Query: 242 gccatggcaaaagacgagcacaacgacgagctaaggcacgcaggaatcatcgacatccag 301
|||||||| || || | || ||| |||| ||||| | || |||||||||||||||
Sbjct: 468 gccatggccaagcccggcctcagcgagaagctccggcactccggcatcatcgacatccag 527
Query: 302 ttcaagagggttccctgccagtaccctgg 330
|||||||| || || ||| ||| ||||||
Sbjct: 528 ttcaagagagtgccgtgcgagttccctgg 556
Score = 40.1 bits (20), Expect = 0.12
Identities = 41/48 (85%)
Strand = Plus / Plus
Query: 383 gtgctggtggagtacgagaacggcgacggcgacgtggtgcaggtggac 430
|||||||||||||||||| || ||||| | || ||||||| ||||||
Sbjct: 608 gtgctggtggagtacgaggaccgcgaccggtacctggtgcatgtggac 655
>gb|AL507275.1|AL507275 AL507275 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY01J07V 5',
mRNA sequence
Length = 549
Score = 143 bits (72), Expect = 1e-032
Identities = 159/188 (84%)
Strand = Plus / Plus
Query: 62 atgacgtcgtgcggcaacgagccaatcttcaaggacggcaaaggatgcgggtcctgctac 121
||||| ||||||||||||||||| ||||||||||| ||||| |||||||| |||||||||
Sbjct: 259 atgacatcgtgcggcaacgagcccatcttcaaggatggcaagggatgcggctcctgctac 318
Query: 122 cagatccggtgcaaggcccaccctgcgtgctccggcgtggcggagacggtgatcatcacg 181
||||| ||||||| | ||| | ||||||||| ||||||||||| |||||||
Sbjct: 319 cagatacggtgcaccaacgaccagtcctgctccggcaacccggagacggtggtcatcacc 378
Query: 182 gacatgaactactacccggtggccccctaccacttcgacctgagcggcactgccttcggg 241
|||||||||||||||||||| ||| ||||||||||||||||| ||||| || |||||
Sbjct: 379 gacatgaactactacccggttgccaagtaccacttcgacctgagtggcaccgcgttcggc 438
Query: 242 gccatggc 249
||||||||
Sbjct: 439 gccatggc 446
Score = 48.1 bits (24), Expect = 5e-004
Identities = 55/64 (85%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 287 atcatcgacatccagttcaagagggttccctgccagtaccctgg-tctgacggtgacctt 345
||||||||||||||||||||||| || || ||| ||| |||||| ||| | ||||||||
Sbjct: 485 atcatcgacatccagttcaagagagtgccgtgcgagttccctgggtctcaaagtgacctt 544
Query: 346 ccac 349
||||
Sbjct: 545 ccac 548
>gb|BI959378.1|BI959378 HVSMEn0019H04f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0019H04f, mRNA sequence
Length = 663
Score = 143 bits (72), Expect = 1e-032
Identities = 159/188 (84%)
Strand = Plus / Plus
Query: 62 atgacgtcgtgcggcaacgagccaatcttcaaggacggcaaaggatgcgggtcctgctac 121
||||| ||||||||||||||||| ||||||||||| ||||| |||||||| |||||||||
Sbjct: 300 atgacatcgtgcggcaacgagcccatcttcaaggatggcaagggatgcggctcctgctac 359
Query: 122 cagatccggtgcaaggcccaccctgcgtgctccggcgtggcggagacggtgatcatcacg 181
||||| ||||||| | ||| | ||||||||| ||||||||||| |||||||
Sbjct: 360 cagatacggtgcaccaacgaccagtcctgctccggcaacccggagacggtggtcatcacc 419
Query: 182 gacatgaactactacccggtggccccctaccacttcgacctgagcggcactgccttcggg 241
|||||||||||||||||||| ||| ||||||||||||||||| ||||| || |||||
Sbjct: 420 gacatgaactactacccggttgccaagtaccacttcgacctgagtggcaccgcgttcggc 479
Query: 242 gccatggc 249
||||||||
Sbjct: 480 gccatggc 487
>gb|BI959654.1|BI959654 HVSMEn0020K03f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0020K03f, mRNA sequence
Length = 679
Score = 143 bits (72), Expect = 1e-032
Identities = 159/188 (84%)
Strand = Plus / Plus
Query: 62 atgacgtcgtgcggcaacgagccaatcttcaaggacggcaaaggatgcgggtcctgctac 121
||||| ||||||||||||||||| ||||||||||| ||||| |||||||| |||||||||
Sbjct: 296 atgacatcgtgcggcaacgagcccatcttcaaggatggcaagggatgcggctcctgctac 355
Query: 122 cagatccggtgcaaggcccaccctgcgtgctccggcgtggcggagacggtgatcatcacg 181
||||| ||||||| | ||| | ||||||||| ||||||||||| |||||||
Sbjct: 356 cagatacggtgcaccaacgaccagtcctgctccggcaacccggagacggtggtcatcacc 415
Query: 182 gacatgaactactacccggtggccccctaccacttcgacctgagcggcactgccttcggg 241
|||||||||||||||||||| ||| ||||||||||||||||| ||||| || |||||
Sbjct: 416 gacatgaactactacccggttgccaagtaccacttcgacctgagtggcaccgcgttcggc 475
Query: 242 gccatggc 249
||||||||
Sbjct: 476 gccatggc 483
Score = 56.0 bits (28), Expect = 2e-006
Identities = 70/84 (83%)
Strand = Plus / Plus
Query: 287 atcatcgacatccagttcaagagggttccctgccagtaccctggtctgacggtgaccttc 346
||||||||||||||||||||||| || || ||| ||| ||||||||| | ||||||||
Sbjct: 521 atcatcgacatccagttcaagagagtgccgtgcgagttccctggtctcaaagtgaccttt 580
Query: 347 cacatcgagcgcggctccaacccc 370
||| | |||| || |||||||||
Sbjct: 581 cacgtggagcaggggtccaacccc 604
>gb|BE196421.3|BE196421 HVSMEh0092D24f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0092D24f, mRNA sequence
Length = 901
Score = 143 bits (72), Expect = 1e-032
Identities = 204/248 (82%)
Strand = Plus / Plus
Query: 62 atgacgtcgtgcggcaacgagccaatcttcaaggacggcaaaggatgcgggtcctgctac 121
||||| ||||||||||||||||| ||||||||||| ||||| |||||||| |||||||||
Sbjct: 214 atgacatcgtgcggcaacgagcccatcttcaaggatggcaagggatgcggctcctgctac 273
Query: 122 cagatccggtgcaaggcccaccctgcgtgctccggcgtggcggagacggtgatcatcacg 181
||||| ||||||| | ||| | ||||||||| ||||||||||| |||||||
Sbjct: 274 cagatacggtgcaccaacgaccagtcctgctccggcaacccggagacggtggtcatcacc 333
Query: 182 gacatgaactactacccggtggccccctaccacttcgacctgagcggcactgccttcggg 241
|||||||||||||||||||| ||| ||||||||||||||||| ||||| || |||||
Sbjct: 334 gacatgaactactacccggttgccaagtaccacttcgacctgagtggcaccgcgttcggc 393
Query: 242 gccatggcaaaagacgagcacaacgacgagctaaggcacgcaggaatcatcgacatccag 301
|||||||| || || | || ||| |||| ||||| | || |||||||||||||||
Sbjct: 394 gccatggccaagcccggcctcagcgagaagctccggcactccggcatcatcgacatccag 453
Query: 302 ttcaagag 309
||||||||
Sbjct: 454 ttcaagag 461
Score = 60.0 bits (30), Expect = 1e-007
Identities = 52/58 (89%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 383 gtgctggtggagtacgagaacggcgacggcgacgtggtgc-aggtggacctgatggag 439
||||||| ||||||||| ||||||||||||||||||||| ||| |||||| ||||||
Sbjct: 534 gtgctgggggagtacgaagacggcgacggcgacgtggtgcaagggggacctaatggag 591
>gb|BE603113.3|BE603113 HVSMEh0101P24f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0101P24f, mRNA sequence
Length = 515
Score = 143 bits (72), Expect = 1e-032
Identities = 159/188 (84%)
Strand = Plus / Plus
Query: 62 atgacgtcgtgcggcaacgagccaatcttcaaggacggcaaaggatgcgggtcctgctac 121
||||| ||||||||||||||||| ||||||||||| ||||| |||||||| |||||||||
Sbjct: 300 atgacatcgtgcggcaacgagcccatcttcaaggatggcaagggatgcggctcctgctac 359
Query: 122 cagatccggtgcaaggcccaccctgcgtgctccggcgtggcggagacggtgatcatcacg 181
||||| ||||||| | ||| | ||||||||| ||||||||||| |||||||
Sbjct: 360 cagatacggtgcaccaacgaccagtcctgctccggcaacccggagacggtggtcatcacc 419
Query: 182 gacatgaactactacccggtggccccctaccacttcgacctgagcggcactgccttcggg 241
|||||||||||||||||||| ||| ||||||||||||||||| ||||| || |||||
Sbjct: 420 gacatgaactactacccggttgccaagtaccacttcgacctgagtggcaccgcgttcggc 479
Query: 242 gccatggc 249
||||||||
Sbjct: 480 gccatggc 487
>gb|BQ758707.1|BQ758707 EBma07_SQ002_G16_R maternal, 21 DPA, no treatment, cv Optic, EBma07
Hordeum vulgare subsp. vulgare cDNA clone
EBma07_SQ002_G16 5', mRNA sequence
Length = 521
Score = 143 bits (72), Expect = 1e-032
Identities = 159/188 (84%)
Strand = Plus / Plus
Query: 62 atgacgtcgtgcggcaacgagccaatcttcaaggacggcaaaggatgcgggtcctgctac 121
||||| ||||||||||||||||| ||||||||||| ||||| |||||||| |||||||||
Sbjct: 282 atgacatcgtgcggcaacgagcccatcttcaaggatggcaagggatgcggctcctgctac 341
Query: 122 cagatccggtgcaaggcccaccctgcgtgctccggcgtggcggagacggtgatcatcacg 181
||||| ||||||| | ||| | ||||||||| ||||||||||| |||||||
Sbjct: 342 cagatacggtgcaccaacgaccagtcctgctccggcaacccggagacggtggtcatcacc 401
Query: 182 gacatgaactactacccggtggccccctaccacttcgacctgagcggcactgccttcggg 241
|||||||||||||||||||| ||| ||||||||||||||||| ||||| || |||||
Sbjct: 402 gacatgaactactacccggttgccaagtaccacttcgacctgagtggcaccgcgttcggc 461
Query: 242 gccatggc 249
||||||||
Sbjct: 462 gccatggc 469
>gb|BU993991.1|BU993991 HM05E17r HM Hordeum vulgare subsp. vulgare cDNA clone HM05E17
5-PRIME, mRNA sequence
Length = 560
Score = 143 bits (72), Expect = 1e-032
Identities = 204/248 (82%)
Strand = Plus / Plus
Query: 62 atgacgtcgtgcggcaacgagccaatcttcaaggacggcaaaggatgcgggtcctgctac 121
||||| ||||||||||||||||| ||||||||||| ||||| |||||||| |||||||||
Sbjct: 313 atgacatcgtgcggcaacgagcccatcttcaaggatggcaagggatgcggctcctgctac 372
Query: 122 cagatccggtgcaaggcccaccctgcgtgctccggcgtggcggagacggtgatcatcacg 181
||||| ||||||| | ||| | ||||||||| ||||||||||| |||||||
Sbjct: 373 cagatacggtgcaccaacgaccagtcctgctccggcaacccggagacggtggtcatcacc 432
Query: 182 gacatgaactactacccggtggccccctaccacttcgacctgagcggcactgccttcggg 241
|||||||||||||||||||| ||| ||||||||||||||||| ||||| || |||||
Sbjct: 433 gacatgaactactacccggttgccaagtaccacttcgacctgagtggcaccgcgttcggc 492
Query: 242 gccatggcaaaagacgagcacaacgacgagctaaggcacgcaggaatcatcgacatccag 301
|||||||| || || | || ||| |||| ||||| | || |||||||||||||||
Sbjct: 493 gccatggccaagcccggcctcagcgagaagctccggcactccggcatcatcgacatccag 552
Query: 302 ttcaagag 309
||||||||
Sbjct: 553 ttcaagag 560
>gb|BG310251.1|BG310251 HVSMEc0016K12f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0016K12f, mRNA sequence
Length = 787
Score = 133 bits (67), Expect = 1e-029
Identities = 151/179 (84%)
Strand = Plus / Plus
Query: 62 atgacgtcgtgcggcaacgagccaatcttcaaggacggcaaaggatgcgggtcctgctac 121
||||| || ||||||||| ||||| | |||||||||||||| |||||||| || ||||||
Sbjct: 308 atgacctcctgcggcaaccagccattgttcaaggacggcaagggatgcggctcatgctac 367
Query: 122 cagatccggtgcaaggcccaccctgcgtgctccggcgtggcggagacggtgatcatcacg 181
||||| | |||| | ||| | ||||||||| | |||||||||||||||||||
Sbjct: 368 aagatcagatgcaggaaggaccaatcctgctccggcaggacggagacggtgatcatcacc 427
Query: 182 gacatgaactactacccggtggccccctaccacttcgacctgagcggcactgccttcgg 240
||||||||||||||||||||||| ||||||||||||||||| |||||||| || |||||
Sbjct: 428 gacatgaactactacccggtggcgccctaccacttcgacctcagcggcacggcgttcgg 486
>gb|BI957582.1|BI957582 HVSMEn0010D14f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0010D14f, mRNA sequence
Length = 628
Score = 133 bits (67), Expect = 1e-029
Identities = 151/179 (84%)
Strand = Plus / Plus
Query: 62 atgacgtcgtgcggcaacgagccaatcttcaaggacggcaaaggatgcgggtcctgctac 121
||||| || ||||||||| ||||| | |||||||||||||| |||||||| || ||||||
Sbjct: 322 atgacctcctgcggcaaccagccattgttcaaggacggcaagggatgcggctcatgctac 381
Query: 122 cagatccggtgcaaggcccaccctgcgtgctccggcgtggcggagacggtgatcatcacg 181
||||| | |||| | ||| | ||||||||| | |||||||||||||||||||
Sbjct: 382 aagatcagatgcaggaaggaccaatcctgctccggcaggacggagacggtgatcatcacc 441
Query: 182 gacatgaactactacccggtggccccctaccacttcgacctgagcggcactgccttcgg 240
||||||||||||||||||||||| ||||||||||||||||||| |||||| || |||||
Sbjct: 442 gacatgaactactacccggtggcgccctaccacttcgacctgaccggcacggcgttcgg 500
>gb|BQ469285.1|BQ469285 HM03P13r HM Hordeum vulgare subsp. vulgare cDNA clone HM03P13
5-PRIME, mRNA sequence
Length = 480
Score = 133 bits (67), Expect = 1e-029
Identities = 151/179 (84%)
Strand = Plus / Plus
Query: 62 atgacgtcgtgcggcaacgagccaatcttcaaggacggcaaaggatgcgggtcctgctac 121
||||| ||||||||||||||||| ||||||||||| ||||| |||||||| |||||||||
Sbjct: 298 atgacatcgtgcggcaacgagcccatcttcaaggatggcaagggatgcggctcctgctac 357
Query: 122 cagatccggtgcaaggcccaccctgcgtgctccggcgtggcggagacggtgatcatcacg 181
||||| ||||||| | ||| | ||||||||| ||||||||||| |||||||
Sbjct: 358 cagatacggtgcaccaacgaccagtcctgctccggcaacccggagacggtggtcatcacc 417
Query: 182 gacatgaactactacccggtggccccctaccacttcgacctgagcggcactgccttcgg 240
|||||||||||||||||||| ||| ||||||||||||||||| ||||| || |||||
Sbjct: 418 gacatgaactactacccggttgccaagtaccacttcgacctgagtggcaccgcgttcgg 476
>gb|BM372935.2|BM372935 EBma04_SQ002_H04_R maternal, 10 DPA, no treatment, cv Optic, EBma04
Hordeum vulgare subsp. vulgare cDNA clone
EBma04_SQ002_H04 5', mRNA sequence
Length = 612
Score = 133 bits (67), Expect = 1e-029
Identities = 151/179 (84%)
Strand = Plus / Plus
Query: 62 atgacgtcgtgcggcaacgagccaatcttcaaggacggcaaaggatgcgggtcctgctac 121
||||| || ||||||||| ||||| | |||||||||||||| |||||||| || ||||||
Sbjct: 302 atgacctcctgcggcaaccagccattgttcaaggacggcaagggatgcggctcatgctac 361
Query: 122 cagatccggtgcaaggcccaccctgcgtgctccggcgtggcggagacggtgatcatcacg 181
||||| | |||| | ||| | ||||||||| | |||||||||||||||||||
Sbjct: 362 aagatcagatgcaggaaggaccaatcctgctccggcaggacggagacggtgatcatcacc 421
Query: 182 gacatgaactactacccggtggccccctaccacttcgacctgagcggcactgccttcgg 240
||||||||||||||||||||||| ||||||||||||||||| |||||||| || |||||
Sbjct: 422 gacatgaactactacccggtggcgccctaccacttcgacctcagcggcacagcgttcgg 480
>gb|BQ759881.1|BQ759881 EBpi05_SQ004_P16_R pistil, 8 DPA, no treatment, cv Optic, EBpi05
Hordeum vulgare subsp. vulgare cDNA clone
EBpi05_SQ004_P16 5', mRNA sequence
Length = 500
Score = 133 bits (67), Expect = 1e-029
Identities = 190/231 (82%)
Strand = Plus / Plus
Query: 209 taccacttcgacctgagcggcactgccttcggggccatggcaaaagacgagcacaacgac 268
||||||||||||||||| ||||| || ||||| |||||||| || || | || |||
Sbjct: 2 taccacttcgacctgagtggcaccgcgttcggcgccatggccaagcccggcctcagcgag 61
Query: 269 gagctaaggcacgcaggaatcatcgacatccagttcaagagggttccctgccagtaccct 328
|||| ||||| | || ||||||||||||||||||||||| || || ||| ||| ||||
Sbjct: 62 aagctccggcactccggcatcatcgacatccagttcaagagagtgccgtgcgagttccct 121
Query: 329 ggtctgacggtgaccttccacatcgagcgcggctccaaccccaactacctggcggtgctg 388
||||| | ||||||||||||| | |||| || || ||||| ||| | || ||||||
Sbjct: 122 ggtctcaaggtgaccttccacgtggagcaggggtcgaacccggtgtacttcgccgtgctg 181
Query: 389 gtggagtacgagaacggcgacggcgacgtggtgcaggtggacctgatggag 439
|||||||||||| ||||||||||||||||||||||||||||||| ||||||
Sbjct: 182 gtggagtacgaggacggcgacggcgacgtggtgcaggtggacctcatggag 232
Score = 93.7 bits (47), Expect = 1e-017
Identities = 92/107 (85%)
Strand = Plus / Plus
Query: 538 gcccttctcgctgcgcgtcaccaacgagtccggcaagacgctggtggcggaccaggtcat 597
||||||||| ||||| ||||||||||||||||||||||||||||||| ||| |||||||
Sbjct: 313 gcccttctccatgcgcatcaccaacgagtccggcaagacgctggtggccgacaaggtcat 372
Query: 598 tccggcagactggcagcccgacaacgtctacagctccatcgtccagt 644
||||| ||||| |||| || | ||||| |||||||||||||||
Sbjct: 373 cccggccaactgggcgcccagcaccttctaccgctccatcgtccagt 419
>gb|CB882163.1|CB882163 HL01B01w HL Hordeum vulgare subsp. vulgare cDNA clone HL01B01
3-PRIME, mRNA sequence
Length = 574
Score = 133 bits (67), Expect = 1e-029
Identities = 151/179 (84%)
Strand = Plus / Plus
Query: 62 atgacgtcgtgcggcaacgagccaatcttcaaggacggcaaaggatgcgggtcctgctac 121
||||| || ||||||||| ||||| | |||||||||||||| |||||||| || ||||||
Sbjct: 316 atgacctcctgcggcaaccagccattgttcaaggacggcaagggatgcggctcatgctac 375
Query: 122 cagatccggtgcaaggcccaccctgcgtgctccggcgtggcggagacggtgatcatcacg 181
||||| | |||| | ||| | ||||||||| | |||||||||||||||||||
Sbjct: 376 aagatcagatgcaggaaggaccaatcctgctccggcaggacggagacggtgatcatcacc 435
Query: 182 gacatgaactactacccggtggccccctaccacttcgacctgagcggcactgccttcgg 240
||||||||||||||||||||||| ||||||||||||||||| |||||||| || |||||
Sbjct: 436 gacatgaactactacccggtggcgccctaccacttcgacctcagcggcacagcgttcgg 494
>gb|CK122346.1|CK122346 BES1824102p12 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010P122 5-PRIME, mRNA sequence
Length = 717
Score = 133 bits (67), Expect = 1e-029
Identities = 151/179 (84%)
Strand = Plus / Plus
Query: 62 atgacgtcgtgcggcaacgagccaatcttcaaggacggcaaaggatgcgggtcctgctac 121
||||| || ||||||||| ||||| | |||||||||||||| |||||||| || ||||||
Sbjct: 10 atgacctcctgcggcaaccagccattgttcaaggacggcaagggatgcggctcatgctac 69
Query: 122 cagatccggtgcaaggcccaccctgcgtgctccggcgtggcggagacggtgatcatcacg 181
||||| | |||| | ||| | ||||||||| | |||||||||||||||||||
Sbjct: 70 aagatcagatgcaggaaggaccaatcctgctccggcaggacggagacggtgatcatcacc 129
Query: 182 gacatgaactactacccggtggccccctaccacttcgacctgagcggcactgccttcgg 240
||||||||||||||||||||||| ||||||||||||||||| |||||||| || |||||
Sbjct: 130 gacatgaactactacccggtggcgccctaccacttcgacctcagcggcacagcgttcgg 188
Score = 107 bits (54), Expect = 6e-022
Identities = 60/62 (96%)
Strand = Plus / Plus
Query: 380 gcggtgctggtggagtacgagaacggcgacggcgacgtggtgcaggtggacctgatggag 439
||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||
Sbjct: 328 gcggtgctggtggagtacgaggacggcgacggcgacgtggtgcaggtggacctcatggag 387
Query: 440 tc 441
||
Sbjct: 388 tc 389
Score = 44.1 bits (22), Expect = 0.008
Identities = 70/86 (81%)
Strand = Plus / Plus
Query: 559 caacgagtccggcaagacgctggtggcggaccaggtcattccggcagactggcagcccga 618
||||||||||||||||||||| || || || ||||||| ||||| ||||| |||| |
Sbjct: 498 caacgagtccggcaagacgctcgtcgccaacaaggtcatcccggccaactggaggcccaa 557
Query: 619 caacgtctacagctccatcgtccagt 644
|| | ||||| ||||| |||| ||||
Sbjct: 558 caccttctaccgctccttcgtgcagt 583
>gb|CK125696.1|CK125696 BES1824110b08 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010B0810 5-PRIME, mRNA sequence
Length = 638
Score = 133 bits (67), Expect = 1e-029
Identities = 151/179 (84%)
Strand = Plus / Plus
Query: 62 atgacgtcgtgcggcaacgagccaatcttcaaggacggcaaaggatgcgggtcctgctac 121
||||| || ||||||||| ||||| | |||||||||||||| |||||||| || ||||||
Sbjct: 252 atgacctcctgcggcaaccagccattgttcaaggacggcaagggatgcggctcatgctac 311
Query: 122 cagatccggtgcaaggcccaccctgcgtgctccggcgtggcggagacggtgatcatcacg 181
||||| | |||| | ||| | ||||||||| | |||||||||||||||||||
Sbjct: 312 aagatcagatgcaggaaggaccaatcctgctccggcaggacggagacggtgatcatcacc 371
Query: 182 gacatgaactactacccggtggccccctaccacttcgacctgagcggcactgccttcgg 240
||||||||||||||||||||||| ||||||||||||||||| |||||||| || |||||
Sbjct: 372 gacatgaactactacccggtggcgccctaccacttcgacctcagcggcacagcgttcgg 430
Score = 73.8 bits (37), Expect = 9e-012
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 380 gcggtgctggtggagtacgagaacggcgacggcgacgtggtgcaggtggacctgatggag 439
|||||||||||||| || | |||||||||||||||||||||||||| |||| ||||||
Sbjct: 571 gcggtgctggtggantancaagacggcgacggcgacgtggtgcaggtgnacctcatggag 630
Query: 440 tc 441
||
Sbjct: 631 tc 632
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 144,506
Number of Sequences: 312970
Number of extensions: 144506
Number of successful extensions: 49082
Number of sequences better than 0.5: 209
Number of HSP's better than 0.5 without gapping: 209
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 48265
Number of HSP's gapped (non-prelim): 700
length of query: 912
length of database: 175,134,539
effective HSP length: 19
effective length of query: 893
effective length of database: 169,188,109
effective search space: 151084981337
effective search space used: 151084981337
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)