BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3829483.2.1
(1069 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BQ471126.1|BQ471126 HV01D06T HV Hordeum vulgare subsp. v... 309 1e-082
gb|AV913623.1|AV913623 AV913623 K. Sato unpublished cDNA li... 299 1e-079
gb|BQ472178.1|BQ472178 HV04K06r HV Hordeum vulgare subsp. v... 246 1e-063
gb|AL505815.1|AL505815 AL505815 Hordeum vulgare Barke roots... 220 7e-056
gb|BF625970.2|BF625970 HVSMEa0015B01f Hordeum vulgare seedl... 220 7e-056
gb|BF622591.2|BF622591 HVSMEa0007C21f Hordeum vulgare seedl... 212 2e-053
gb|BF259796.2|BF259796 HVSMEf0020E15f Hordeum vulgare seedl... 210 7e-053
gb|AL504826.1|AL504826 AL504826 Hordeum vulgare Barke roots... 186 1e-045
gb|CA012122.1|CA012122 HT04I07r HT Hordeum vulgare subsp. v... 178 2e-043
gb|BF623190.3|BF623190 HVSMEa0015C04f Hordeum vulgare seedl... 170 6e-041
gb|BQ467879.1|BQ467879 HR01D11r HR Hordeum vulgare subsp. v... 157 9e-037
gb|AV918927.1|AV918927 AV918927 K. Sato unpublished cDNA li... 155 4e-036
gb|BM817225.1|BM817225 HC109B04_T3.ab1 HC Hordeum vulgare s... 149 2e-034
gb|AL503324.1|AL503324 AL503324 Hordeum vulgare Barke roots... 147 9e-034
gb|BF622224.2|BF622224 HVSMEa0002C05f Hordeum vulgare seedl... 147 9e-034
gb|BF622512.2|BF622512 HVSMEa0004K18f Hordeum vulgare seedl... 147 9e-034
gb|BF621550.2|BF621550 HVSMEa0011F24f Hordeum vulgare seedl... 147 9e-034
gb|BF624202.2|BF624202 HVSMEa0012J22f Hordeum vulgare seedl... 147 9e-034
gb|BF624618.2|BF624618 HVSMEa0017E14f Hordeum vulgare seedl... 147 9e-034
gb|BG299731.1|BG299731 HVSMEa0021J09f Hordeum vulgare seedl... 147 9e-034
gb|BF621862.3|BF621862 HVSMEa0001C05f Hordeum vulgare seedl... 147 9e-034
gb|BF622215.3|BF622215 HVSMEa0002A20f Hordeum vulgare seedl... 147 9e-034
gb|BF631562.2|BF631562 HVSMEb0016G15f Hordeum vulgare seedl... 147 9e-034
gb|BF629286.3|BF629286 HVSMEb0010K15f Hordeum vulgare seedl... 147 9e-034
gb|BQ466487.1|BQ466487 HT02K21r HT Hordeum vulgare subsp. v... 147 9e-034
gb|BQ765875.1|BQ765875 EBro03_SQ008_M07_R root, 3 week, wat... 147 9e-034
gb|BF622191.2|BF622191 HVSMEa0001P16f Hordeum vulgare seedl... 139 2e-031
gb|BG299804.2|BG299804 HVSMEa0021O04f Hordeum vulgare seedl... 139 2e-031
gb|BF623248.2|BF623248 HVSMEa0016A09f Hordeum vulgare seedl... 123 1e-026
gb|BU989585.1|BU989585 HF22C07r HF Hordeum vulgare subsp. v... 121 5e-026
gb|BF066033.2|BF066033 HV_CEb0014K12f Hordeum vulgare seedl... 117 8e-025
gb|BM442945.2|BM442945 EBro02_SQ001_P16_R root, 3 week, hyd... 117 8e-025
gb|BG299590.1|BG299590 HVSMEa0020O20f Hordeum vulgare seedl... 115 3e-024
gb|BF622945.3|BF622945 HVSMEa0012E03f Hordeum vulgare seedl... 115 3e-024
gb|BF621473.2|BF621473 HVSMEa0011B16f Hordeum vulgare seedl... 113 1e-023
gb|BG299389.1|BG299389 HVSMEa0019L19f Hordeum vulgare seedl... 105 3e-021
gb|BF624504.3|BF624504 HVSMEa0016N24f Hordeum vulgare seedl... 105 3e-021
gb|BF256380.2|BF256380 HVSMEf0009H03f Hordeum vulgare seedl... 105 3e-021
gb|BF259078.2|BF259078 HVSMEf0017J19f Hordeum vulgare seedl... 105 3e-021
gb|BG368894.1|BG368894 HVSMEi0021D06f Hordeum vulgare 20 DA... 105 3e-021
gb|BF065184.1|BF065184 HV_CEb0023O18f Hordeum vulgare seedl... 105 3e-021
gb|BE214207.2|BE214207 HV_CEb0002K18f Hordeum vulgare seedl... 105 3e-021
gb|BM375338.2|BM375338 EBem06_SQ003_A18_R embryo, 21 DPA, n... 105 3e-021
gb|CA004877.1|CA004877 HS18P04r HS Hordeum vulgare subsp. v... 105 3e-021
gb|CA022668.1|CA022668 HZ44A05r HZ Hordeum vulgare subsp. v... 105 3e-021
gb|BF623115.2|BF623115 HVSMEa0014H14f Hordeum vulgare seedl... 103 1e-020
gb|BF627874.2|BF627874 HVSMEb0006C01f Hordeum vulgare seedl... 103 1e-020
gb|BF625851.2|BF625851 HVSMEa0013N14f Hordeum vulgare seedl... 101 5e-020
gb|BG415059.1|BG415059 HVSMEk0004P20f Hordeum vulgare testa... 94 1e-017
gb|BF255920.2|BF255920 HVSMEf0008D10f Hordeum vulgare seedl... 94 1e-017
gb|BF622265.2|BF622265 HVSMEa0002G13f Hordeum vulgare seedl... 92 4e-017
gb|BF625550.2|BF625550 HVSMEa0011E08f Hordeum vulgare seedl... 92 4e-017
gb|BG299996.1|BG299996 HVSMEa0022O20f Hordeum vulgare seedl... 92 4e-017
gb|BF257478.2|BF257478 HVSMEf0013A10f Hordeum vulgare seedl... 92 4e-017
gb|BE214950.1|BE214950 HV_CEb0005F03f Hordeum vulgare seedl... 92 4e-017
gb|BE195630.3|BE195630 HVSMEh0089P24f Hordeum vulgare 5-45 ... 92 4e-017
gb|AV908971.1|AV908971 AV908971 K. Sato unpublished cDNA li... 92 4e-017
gb|BQ762933.1|BQ762933 EBro02_SQ006_H16 _R root, 3 week, hy... 92 4e-017
gb|CA003018.1|CA003018 HS09C19r HS Hordeum vulgare subsp. v... 92 4e-017
gb|CA011829.1|CA011829 HT03K17r HT Hordeum vulgare subsp. v... 92 4e-017
gb|CA013731.1|CA013731 HT09F05r HT Hordeum vulgare subsp. v... 92 4e-017
gb|BJ544235.1|BJ544235 BJ544235 K. Sato unpublished cDNA li... 92 4e-017
gb|BJ544573.1|BJ544573 BJ544573 K. Sato unpublished cDNA li... 92 4e-017
gb|BF623987.2|BF623987 HVSMEa0008F14f Hordeum vulgare seedl... 90 2e-016
gb|BI953615.1|BI953615 HVSMEm0013J07f Hordeum vulgare green... 90 2e-016
gb|BI954235.1|BI954235 HVSMEm0016M03f Hordeum vulgare green... 90 2e-016
gb|BF264380.2|BF264380 HV_CEa0009E08f Hordeum vulgare seedl... 90 2e-016
gb|BI960661.1|BI960661 HVSMEn0025K13f Hordeum vulgare rachi... 90 2e-016
gb|BF623386.2|BF623386 HVSMEa0016I09f Hordeum vulgare seedl... 88 7e-016
gb|BF257698.2|BF257698 HVSMEf0013K02f Hordeum vulgare seedl... 88 7e-016
gb|BI950533.1|BI950533 HVSMEl0021D14f Hordeum vulgare spike... 88 7e-016
gb|BQ465287.1|BQ465287 HU03D01r HU Hordeum vulgare subsp. v... 88 7e-016
gb|CA004703.1|CA004703 HS18G22r HS Hordeum vulgare subsp. v... 88 7e-016
gb|CA007742.1|CA007742 HU08O02r HU Hordeum vulgare subsp. v... 88 7e-016
gb|CA012539.1|CA012539 HT05L11r HT Hordeum vulgare subsp. v... 88 7e-016
gb|CA017465.1|CA017465 HV05E15r HV Hordeum vulgare subsp. v... 88 7e-016
gb|CA017476.1|CA017476 HV05F04r HV Hordeum vulgare subsp. v... 88 7e-016
gb|CA019652.1|CA019652 HV12K19r HV Hordeum vulgare subsp. v... 88 7e-016
gb|BF623830.2|BF623830 HVSMEa0007D03f Hordeum vulgare seedl... 84 1e-014
gb|CA006848.1|CA006848 HU05N24r HU Hordeum vulgare subsp. v... 84 1e-014
gb|BF259240.3|BF259240 HVSMEf0018G18f Hordeum vulgare seedl... 80 2e-013
gb|AV924070.1|AV924070 AV924070 K. Sato unpublished cDNA li... 80 2e-013
gb|BM816911.1|BM816911 HB106C10_SK.ab1 HB Hordeum vulgare s... 80 2e-013
gb|BM369733.2|BM369733 EBem07_SQ004_H07_R embryo, 28 DPA, n... 80 2e-013
gb|BF625649.2|BF625649 HVSMEa0013B21f Hordeum vulgare seedl... 78 7e-013
gb|BF619549.2|BF619549 HVSMEc0004A15f Hordeum vulgare seedl... 78 7e-013
gb|BF619363.2|BF619363 HVSMEc0016M05f Hordeum vulgare seedl... 78 7e-013
gb|BF620788.2|BF620788 HVSMEc0020N16f Hordeum vulgare seedl... 78 7e-013
gb|BE558770.2|BE558770 HV_CEb0020E13f Hordeum vulgare seedl... 78 7e-013
gb|BI959586.1|BI959586 HVSMEn0020E21f Hordeum vulgare rachi... 78 7e-013
gb|BE196145.3|BE196145 HVSMEh0091H19f Hordeum vulgare 5-45 ... 78 7e-013
gb|BE196654.3|BE196654 HVSMEh0092O09f Hordeum vulgare 5-45 ... 78 7e-013
gb|AV932609.1|AV932609 AV932609 K. Sato unpublished cDNA li... 78 7e-013
gb|BJ471554.1|BJ471554 BJ471554 K. Sato unpublished cDNA li... 78 7e-013
gb|BQ460114.1|BQ460114 HA07C20r HA Hordeum vulgare subsp. v... 78 7e-013
gb|BQ467510.1|BQ467510 HS04A05r HS Hordeum vulgare subsp. v... 78 7e-013
gb|BQ467646.1|BQ467646 HS04G23r HS Hordeum vulgare subsp. v... 78 7e-013
gb|BM369749.2|BM369749 EBem07_SQ004_H24_R embryo, 28 DPA, n... 78 7e-013
gb|BI776549.2|BI776549 EBpi05_SQ001_N14_R pistil, 8 DPA, no... 78 7e-013
gb|BQ765092.1|BQ765092 EBca01_SQ005_D19_R carpel, pre-anthe... 78 7e-013
gb|CA001613.1|CA001613 HS05B06r HS Hordeum vulgare subsp. v... 78 7e-013
gb|CA001781.1|CA001781 HS05J03r HS Hordeum vulgare subsp. v... 78 7e-013
gb|CA012182.1|CA012182 HT04L19r HT Hordeum vulgare subsp. v... 78 7e-013
gb|CA023217.1|CA023217 HZ45J07r HZ Hordeum vulgare subsp. v... 78 7e-013
gb|CA024893.1|CA024893 HZ50K02r HZ Hordeum vulgare subsp. v... 78 7e-013
gb|CA025920.1|CA025920 HZ53I14r HZ Hordeum vulgare subsp. v... 78 7e-013
gb|CA027026.1|CA027026 HZ57K21r HZ Hordeum vulgare subsp. v... 78 7e-013
gb|CA027925.1|CA027925 HZ60H09r HZ Hordeum vulgare subsp. v... 78 7e-013
gb|CA028145.1|CA028145 HZ61C04r HZ Hordeum vulgare subsp. v... 78 7e-013
gb|CA028873.1|CA028873 HZ63H22r HZ Hordeum vulgare subsp. v... 78 7e-013
gb|CA029001.1|CA029001 HZ63O10r HZ Hordeum vulgare subsp. v... 78 7e-013
gb|CA029484.1|CA029484 HZ65F17r HZ Hordeum vulgare subsp. v... 78 7e-013
gb|CK122333.1|CK122333 BES1824102o06 BES1824 Hordeum vulgar... 78 7e-013
gb|AF109194.1|AF109194 Hordeum vulgare glutathione-S-transf... 78 7e-013
gb|BI954463.1|BI954463 HVSMEm0018B07f Hordeum vulgare green... 76 3e-012
gb|BI954877.1|BI954877 HVSMEm0020D03f Hordeum vulgare green... 76 3e-012
gb|BF261927.2|BF261927 HV_CEa0002J15f Hordeum vulgare seedl... 74 1e-011
gb|BE214714.2|BE214714 HV_CEb0004E24f Hordeum vulgare seedl... 74 1e-011
gb|BE216067.2|BE216067 HV_CEb0009E21f Hordeum vulgare seedl... 74 1e-011
gb|CA025935.1|CA025935 HZ53J07r HZ Hordeum vulgare subsp. v... 74 1e-011
gb|BF622044.2|BF622044 HVSMEa0001J20f Hordeum vulgare seedl... 72 4e-011
gb|BF623515.3|BF623515 HVSMEa0002H21f Hordeum vulgare seedl... 72 4e-011
gb|BF265689.1|BF265689 HV_CEa0013B06f Hordeum vulgare seedl... 72 4e-011
gb|BF263502.3|BF263502 HV_CEa0006O15f Hordeum vulgare seedl... 72 4e-011
gb|BF267193.3|BF267193 HV_CEa0017D12f Hordeum vulgare seedl... 72 4e-011
gb|BE214864.3|BE214864 HV_CEb0004O15f Hordeum vulgare seedl... 72 4e-011
gb|CA027668.1|CA027668 HZ59K12r HZ Hordeum vulgare subsp. v... 72 4e-011
gb|BF255868.2|BF255868 HVSMEf0008A20f Hordeum vulgare seedl... 70 2e-010
gb|BI947132.1|BI947132 HVSMEl0003N16f Hordeum vulgare spike... 70 2e-010
gb|BI949705.1|BI949705 HVSMEl0015H08f Hordeum vulgare spike... 70 2e-010
gb|AL503233.1|AL503233 AL503233 Hordeum vulgare Barke roots... 68 6e-010
gb|AL504140.1|AL504140 AL504140 Hordeum vulgare Barke roots... 68 6e-010
gb|BF622486.2|BF622486 HVSMEa0004I15f Hordeum vulgare seedl... 68 6e-010
gb|BF625356.2|BF625356 HVSMEa0008J19f Hordeum vulgare seedl... 68 6e-010
gb|BF626393.3|BF626393 HVSMEa0018A21f Hordeum vulgare seedl... 68 6e-010
gb|BI947723.1|BI947723 HVSMEl0006J20f Hordeum vulgare spike... 68 6e-010
gb|BI949438.1|BI949438 HVSMEl0013O11f Hordeum vulgare spike... 68 6e-010
gb|BF256426.3|BF256426 HVSMEf0009J14f Hordeum vulgare seedl... 68 6e-010
gb|BQ471258.1|BQ471258 HV01N17T HV Hordeum vulgare subsp. v... 68 6e-010
gb|BF255671.2|BF255671 HVSMEf0007H20f Hordeum vulgare seedl... 66 3e-009
gb|BF267015.2|BF267015 HV_CEa0016L05f Hordeum vulgare seedl... 66 3e-009
gb|AV833639.1|AV833639 AV833639 K. Sato unpublished cDNA li... 64 1e-008
gb|BI949279.1|BI949279 HVSMEl0013C05f Hordeum vulgare spike... 64 1e-008
gb|BE214393.3|BE214393 HV_CEb0003F04f Hordeum vulgare seedl... 64 1e-008
gb|AL500273.1|AL500273 AL500273 Hordeum vulgare Barke etiol... 62 4e-008
gb|BF624576.2|BF624576 HVSMEa0017C18f Hordeum vulgare seedl... 62 4e-008
gb|BF623533.3|BF623533 HVSMEa0002J15f Hordeum vulgare seedl... 62 4e-008
gb|BF628237.2|BF628237 HVSMEb0003H24f Hordeum vulgare seedl... 62 4e-008
gb|BI946932.1|BI946932 HVSMEl0002N24f Hordeum vulgare spike... 62 4e-008
gb|BE214034.1|BE214034 HV_CEb0001P12f Hordeum vulgare seedl... 62 4e-008
gb|BE215069.1|BE215069 HV_CEb0005L08f Hordeum vulgare seedl... 62 4e-008
gb|BF264443.1|BF264443 HV_CEa0009H01f Hordeum vulgare seedl... 62 4e-008
gb|BF268066.2|BF268066 HV_CEa0019M05f Hordeum vulgare seedl... 62 4e-008
gb|BE215347.2|BE215347 HV_CEb0006I19f Hordeum vulgare seedl... 62 4e-008
gb|BF630948.3|BF630948 HVSMEb0014I05f Hordeum vulgare seedl... 62 4e-008
gb|BQ740072.1|BQ740072 HC04F04 HC Hordeum vulgare subsp. vu... 62 4e-008
gb|BQ767689.1|BQ767689 EBro08_SQ009_H13_R root, 3 week, dro... 62 4e-008
gb|CA027071.1|CA027071 HZ57M23r HZ Hordeum vulgare subsp. v... 62 4e-008
gb|BI948891.1|BI948891 HVSMEl0011E18f Hordeum vulgare spike... 60 2e-007
gb|BE216829.1|BE216829 HV_CEb0011L16f Hordeum vulgare seedl... 60 2e-007
gb|BF258960.3|BF258960 HVSMEf0017C18f Hordeum vulgare seedl... 60 2e-007
gb|AJ435050.1|AJ435050 AJ435050 S00002 Hordeum vulgare subs... 60 2e-007
gb|BQ469646.1|BQ469646 HZ01H04r HZ Hordeum vulgare subsp. v... 60 2e-007
gb|BF253897.2|BF253897 HVSMEf0002G20f Hordeum vulgare seedl... 58 6e-007
gb|BE411006.1|BE411006 ISC001.D03F990519 ITEC ISC Barley Le... 56 2e-006
gb|BE421080.1|BE421080 HWM005.F01 ITEC HWM Barley Leaf Libr... 56 2e-006
gb|BE421272.1|BE421272 HWM007.F01 ITEC HWM Barley Leaf Libr... 56 2e-006
gb|BF626678.2|BF626678 HVSMEb0001A21f Hordeum vulgare seedl... 56 2e-006
gb|BE602348.2|BE602348 HVSMEh0098J09f Hordeum vulgare 5-45 ... 56 2e-006
gb|BG368482.1|BG368482 HVSMEi0019D10f Hordeum vulgare 20 DA... 56 2e-006
gb|BI947729.1|BI947729 HVSMEl0006K08f Hordeum vulgare spike... 56 2e-006
gb|BI948019.1|BI948019 HVSMEl0007N21f Hordeum vulgare spike... 56 2e-006
gb|BI948082.1|BI948082 HVSMEl0008C04f Hordeum vulgare spike... 56 2e-006
gb|BI949114.1|BI949114 HVSMEl0012G22f Hordeum vulgare spike... 56 2e-006
gb|BI949614.1|BI949614 HVSMEl0014O15f Hordeum vulgare spike... 56 2e-006
gb|BI953138.1|BI953138 HVSMEm0011D12f Hordeum vulgare green... 56 2e-006
gb|BI953646.1|BI953646 HVSMEm0013K24f Hordeum vulgare green... 56 2e-006
gb|BE215757.1|BE215757 HV_CEb0008G14f Hordeum vulgare seedl... 56 2e-006
gb|BE216017.1|BE216017 HV_CEb0009C05f Hordeum vulgare seedl... 56 2e-006
gb|BE216520.1|BE216520 HV_CEb0010L11f Hordeum vulgare seedl... 56 2e-006
gb|BF065573.1|BF065573 HV_CEb0012M23f Hordeum vulgare seedl... 56 2e-006
gb|BF065604.1|BF065604 HV_CEb0012O15f Hordeum vulgare seedl... 56 2e-006
gb|BF065899.1|BF065899 HV_CEb0014E21f Hordeum vulgare seedl... 56 2e-006
gb|BF065922.1|BF065922 HV_CEb0014F21f Hordeum vulgare seedl... 56 2e-006
gb|BF065944.1|BF065944 HV_CEb0014G19f Hordeum vulgare seedl... 56 2e-006
gb|BF065968.1|BF065968 HV_CEb0014H19f Hordeum vulgare seedl... 56 2e-006
gb|BF266117.2|BF266117 HV_CEa0014D16f Hordeum vulgare seedl... 56 2e-006
gb|BF267384.2|BF267384 HV_CEa0017M06f Hordeum vulgare seedl... 56 2e-006
gb|BE559055.2|BE559055 HV_CEb0022I16f Hordeum vulgare seedl... 56 2e-006
gb|BG342989.2|BG342989 HVSMEg0001J14f Hordeum vulgare pre-a... 56 2e-006
gb|BE602564.3|BE602564 HVSMEh0100A01f Hordeum vulgare 5-45 ... 56 2e-006
gb|AV922724.1|AV922724 AV922724 K. Sato unpublished cDNA li... 56 2e-006
gb|AV923424.1|AV923424 AV923424 K. Sato unpublished cDNA li... 56 2e-006
gb|AV923513.1|AV923513 AV923513 K. Sato unpublished cDNA li... 56 2e-006
gb|AV923925.1|AV923925 AV923925 K. Sato unpublished cDNA li... 56 2e-006
gb|AV924773.1|AV924773 AV924773 K. Sato unpublished cDNA li... 56 2e-006
gb|AV925064.1|AV925064 AV925064 K. Sato unpublished cDNA li... 56 2e-006
gb|AV926037.1|AV926037 AV926037 K. Sato unpublished cDNA li... 56 2e-006
gb|AV926646.1|AV926646 AV926646 K. Sato unpublished cDNA li... 56 2e-006
gb|AV926802.1|AV926802 AV926802 K. Sato unpublished cDNA li... 56 2e-006
gb|AV926829.1|AV926829 AV926829 K. Sato unpublished cDNA li... 56 2e-006
gb|AV932402.1|AV932402 AV932402 K. Sato unpublished cDNA li... 56 2e-006
gb|AV933046.1|AV933046 AV933046 K. Sato unpublished cDNA li... 56 2e-006
gb|AV933203.1|AV933203 AV933203 K. Sato unpublished cDNA li... 56 2e-006
gb|AV933552.1|AV933552 AV933552 K. Sato unpublished cDNA li... 56 2e-006
gb|AV933636.1|AV933636 AV933636 K. Sato unpublished cDNA li... 56 2e-006
gb|AV934138.1|AV934138 AV934138 K. Sato unpublished cDNA li... 56 2e-006
gb|AV934268.1|AV934268 AV934268 K. Sato unpublished cDNA li... 56 2e-006
gb|BJ469586.1|BJ469586 BJ469586 K. Sato unpublished cDNA li... 56 2e-006
gb|BI778185.2|BI778185 EBro07_SQ002_H11_R root, 3 week, red... 56 2e-006
gb|CA017560.1|CA017560 HV05I24r HV Hordeum vulgare subsp. v... 56 2e-006
gb|BJ546858.1|BJ546858 BJ546858 K. Sato unpublished cDNA li... 56 2e-006
gb|BJ546861.1|BJ546861 BJ546861 K. Sato unpublished cDNA li... 56 2e-006
gb|BJ546871.1|BJ546871 BJ546871 K. Sato unpublished cDNA li... 56 2e-006
gb|BJ546903.1|BJ546903 BJ546903 K. Sato unpublished cDNA li... 56 2e-006
gb|BJ546927.1|BJ546927 BJ546927 K. Sato unpublished cDNA li... 56 2e-006
gb|BJ546949.1|BJ546949 BJ546949 K. Sato unpublished cDNA li... 56 2e-006
gb|BJ546968.1|BJ546968 BJ546968 K. Sato unpublished cDNA li... 56 2e-006
gb|BJ547042.1|BJ547042 BJ547042 K. Sato unpublished cDNA li... 56 2e-006
gb|BJ547072.1|BJ547072 BJ547072 K. Sato unpublished cDNA li... 56 2e-006
gb|BJ547109.1|BJ547109 BJ547109 K. Sato unpublished cDNA li... 56 2e-006
gb|BJ547144.1|BJ547144 BJ547144 K. Sato unpublished cDNA li... 56 2e-006
gb|BJ547269.1|BJ547269 BJ547269 K. Sato unpublished cDNA li... 56 2e-006
gb|BJ547290.1|BJ547290 BJ547290 K. Sato unpublished cDNA li... 56 2e-006
gb|BJ547398.1|BJ547398 BJ547398 K. Sato unpublished cDNA li... 56 2e-006
gb|BJ547507.1|BJ547507 BJ547507 K. Sato unpublished cDNA li... 56 2e-006
gb|BJ547528.1|BJ547528 BJ547528 K. Sato unpublished cDNA li... 56 2e-006
gb|BJ547544.1|BJ547544 BJ547544 K. Sato unpublished cDNA li... 56 2e-006
gb|BJ547611.1|BJ547611 BJ547611 K. Sato unpublished cDNA li... 56 2e-006
gb|BJ547635.1|BJ547635 BJ547635 K. Sato unpublished cDNA li... 56 2e-006
gb|BJ547661.1|BJ547661 BJ547661 K. Sato unpublished cDNA li... 56 2e-006
gb|BJ547685.1|BJ547685 BJ547685 K. Sato unpublished cDNA li... 56 2e-006
gb|BJ547741.1|BJ547741 BJ547741 K. Sato unpublished cDNA li... 56 2e-006
gb|BJ547767.1|BJ547767 BJ547767 K. Sato unpublished cDNA li... 56 2e-006
gb|BJ547768.1|BJ547768 BJ547768 K. Sato unpublished cDNA li... 56 2e-006
gb|BJ547778.1|BJ547778 BJ547778 K. Sato unpublished cDNA li... 56 2e-006
gb|BJ547797.1|BJ547797 BJ547797 K. Sato unpublished cDNA li... 56 2e-006
gb|BJ547849.1|BJ547849 BJ547849 K. Sato unpublished cDNA li... 56 2e-006
gb|BJ547881.1|BJ547881 BJ547881 K. Sato unpublished cDNA li... 56 2e-006
gb|BJ548150.1|BJ548150 BJ548150 K. Sato unpublished cDNA li... 56 2e-006
gb|BJ548512.1|BJ548512 BJ548512 K. Sato unpublished cDNA li... 56 2e-006
gb|BJ548902.1|BJ548902 BJ548902 K. Sato unpublished cDNA li... 56 2e-006
gb|BF254086.3|BF254086 HVSMEf0002P20f Hordeum vulgare seedl... 54 1e-005
gb|CV058333.1|CV058333 BNEL36h8 Barley EST endosperm librar... 54 1e-005
gb|CV060337.1|CV060337 BNEL57a4 Barley EST endosperm librar... 54 1e-005
gb|BF623684.2|BF623684 HVSMEa0003M02f Hordeum vulgare seedl... 52 4e-005
gb|BF626269.2|BF626269 HVSMEa0018D07f Hordeum vulgare seedl... 52 4e-005
gb|BF254945.2|BF254945 HVSMEf0005H21f Hordeum vulgare seedl... 52 4e-005
gb|BI948705.1|BI948705 HVSMEl0010J03f Hordeum vulgare spike... 52 4e-005
gb|BI949974.1|BI949974 HVSMEl0017G12f Hordeum vulgare spike... 52 4e-005
gb|BI952081.1|BI952081 HVSMEm0004I21f Hordeum vulgare green... 52 4e-005
gb|BQ464763.1|BQ464763 HU01G03T HU Hordeum vulgare subsp. v... 52 4e-005
gb|BQ466342.1|BQ466342 HT02E05r HT Hordeum vulgare subsp. v... 52 4e-005
gb|BQ466475.1|BQ466475 HT02K07r HT Hordeum vulgare subsp. v... 52 4e-005
gb|BQ466550.1|BQ466550 HT02N19r HT Hordeum vulgare subsp. v... 52 4e-005
gb|CA004080.1|CA004080 HS16H17r HS Hordeum vulgare subsp. v... 52 4e-005
gb|CA004785.1|CA004785 HS18K23r HS Hordeum vulgare subsp. v... 52 4e-005
gb|CA013624.1|CA013624 HT09A14r HT Hordeum vulgare subsp. v... 52 4e-005
gb|CA014093.1|CA014093 HT10F20r HT Hordeum vulgare subsp. v... 52 4e-005
gb|CA014271.1|CA014271 HT10O05r HT Hordeum vulgare subsp. v... 52 4e-005
gb|CA014392.1|CA014392 HT11D14r HT Hordeum vulgare subsp. v... 52 4e-005
gb|CA015258.1|CA015258 HT13M04r HT Hordeum vulgare subsp. v... 52 4e-005
gb|CA015289.1|CA015289 HT13N17r HT Hordeum vulgare subsp. v... 52 4e-005
gb|CA015381.1|CA015381 HT14C07r HT Hordeum vulgare subsp. v... 52 4e-005
gb|CA015590.1|CA015590 HT14M12r HT Hordeum vulgare subsp. v... 52 4e-005
gb|AV834409.1|AV834409 AV834409 K. Sato unpublished cDNA li... 50 2e-004
gb|BF625840.2|BF625840 HVSMEa0013N01f Hordeum vulgare seedl... 46 0.002
gb|BF259188.2|BF259188 HVSMEf0018A14f Hordeum vulgare seedl... 46 0.002
gb|BI953796.1|BI953796 HVSMEm0014I06f Hordeum vulgare green... 46 0.002
gb|BF267688.2|BF267688 HV_CEa0018J20f Hordeum vulgare seedl... 46 0.002
gb|AV929159.1|AV929159 AV929159 K. Sato unpublished cDNA li... 46 0.002
gb|AJ435107.1|AJ435107 AJ435107 S00002 Hordeum vulgare subs... 46 0.002
gb|BQ663568.1|BQ663568 HU03D01u HU Hordeum vulgare subsp. v... 46 0.002
gb|BQ766061.1|BQ766061 EBro03_SQ008_N21_R root, 3 week, wat... 46 0.002
gb|CA011833.1|CA011833 HT03K21r HT Hordeum vulgare subsp. v... 46 0.002
gb|CA012898.1|CA012898 HT06M15r HT Hordeum vulgare subsp. v... 46 0.002
gb|CA025903.1|CA025903 HZ53H14r HZ Hordeum vulgare subsp. v... 46 0.002
gb|BJ548248.1|BJ548248 BJ548248 K. Sato unpublished cDNA li... 46 0.002
gb|CK125646.1|CK125646 BES1824109j16 BES1824 Hordeum vulgar... 46 0.002
gb|BI948427.1|BI948427 HVSMEl0009I08f Hordeum vulgare spike... 44 0.009
gb|BI950563.1|BI950563 HVSMEl0021F15f Hordeum vulgare spike... 44 0.009
gb|BI952820.1|BI952820 HVSMEm0007N21f Hordeum vulgare green... 44 0.009
gb|BI955294.1|BI955294 HVSMEm0022F18f Hordeum vulgare green... 44 0.009
gb|BF267219.2|BF267219 HV_CEa0017E18f Hordeum vulgare seedl... 44 0.009
gb|BF263128.3|BF263128 HV_CEa0005O11f Hordeum vulgare seedl... 44 0.009
gb|BM443568.2|BM443568 EBro02_SQ005_L07_R root, 3 week, hyd... 44 0.009
gb|BJ546901.1|BJ546901 BJ546901 K. Sato unpublished cDNA li... 44 0.009
gb|BJ547095.1|BJ547095 BJ547095 K. Sato unpublished cDNA li... 44 0.009
gb|BJ547558.1|BJ547558 BJ547558 K. Sato unpublished cDNA li... 44 0.009
gb|BJ548403.1|BJ548403 BJ548403 K. Sato unpublished cDNA li... 44 0.009
gb|BJ548926.1|BJ548926 BJ548926 K. Sato unpublished cDNA li... 44 0.009
gb|BF253797.2|BF253797 HVSMEf0002C11f Hordeum vulgare seedl... 42 0.037
gb|BF253803.2|BF253803 HVSMEf0002C17f Hordeum vulgare seedl... 42 0.037
gb|BF258539.2|BF258539 HVSMEf0016A04f Hordeum vulgare seedl... 42 0.037
gb|AW982768.2|AW982768 HVSMEg0004C16f Hordeum vulgare pre-a... 42 0.037
gb|BI951922.1|BI951922 HVSMEm0003M11f Hordeum vulgare green... 42 0.037
gb|BF259824.3|BF259824 HVSMEf0020F20f Hordeum vulgare seedl... 42 0.037
gb|BM442923.2|BM442923 EBro02_SQ001_N17_R root, 3 week, hyd... 42 0.037
gb|BQ763153.1|BQ763153 EBro02_SQ007_K08_R root, 3 week, hyd... 42 0.037
gb|BQ766637.1|BQ766637 EBro08_SQ006_N18_R root, 3 week, dro... 42 0.037
gb|BF623361.2|BF623361 HVSMEa0015I24f Hordeum vulgare seedl... 40 0.15
gb|BG299767.1|BG299767 HVSMEa0021L16f Hordeum vulgare seedl... 40 0.15
gb|BF624808.3|BF624808 HVSMEa0017M20f Hordeum vulgare seedl... 40 0.15
gb|BF257083.2|BF257083 HVSMEf0011M23f Hordeum vulgare seedl... 40 0.15
gb|BF260718.2|BF260718 HVSMEf0022M04f Hordeum vulgare seedl... 40 0.15
gb|BF267321.1|BF267321 HV_CEa0017J04f Hordeum vulgare seedl... 40 0.15
gb|AV927871.1|AV927871 AV927871 K. Sato unpublished cDNA li... 40 0.15
gb|AV929870.1|AV929870 AV929870 K. Sato unpublished cDNA li... 40 0.15
gb|AV931694.1|AV931694 AV931694 K. Sato unpublished cDNA li... 40 0.15
gb|AV931720.1|AV931720 AV931720 K. Sato unpublished cDNA li... 40 0.15
gb|AV933803.1|AV933803 AV933803 K. Sato unpublished cDNA li... 40 0.15
gb|AV935988.1|AV935988 AV935988 K. Sato unpublished cDNA li... 40 0.15
gb|AV936388.1|AV936388 AV936388 K. Sato unpublished cDNA li... 40 0.15
gb|AV936609.1|AV936609 AV936609 K. Sato unpublished cDNA li... 40 0.15
gb|AV936756.1|AV936756 AV936756 K. Sato unpublished cDNA li... 40 0.15
gb|AV937000.1|AV937000 AV937000 K. Sato unpublished cDNA li... 40 0.15
gb|BJ547972.1|BJ547972 BJ547972 K. Sato unpublished cDNA li... 40 0.15
gb|BJ547998.1|BJ547998 BJ547998 K. Sato unpublished cDNA li... 40 0.15
gb|BJ548020.1|BJ548020 BJ548020 K. Sato unpublished cDNA li... 40 0.15
gb|BJ548174.1|BJ548174 BJ548174 K. Sato unpublished cDNA li... 40 0.15
gb|BJ548320.1|BJ548320 BJ548320 K. Sato unpublished cDNA li... 40 0.15
gb|BJ548529.1|BJ548529 BJ548529 K. Sato unpublished cDNA li... 40 0.15
gb|BJ548533.1|BJ548533 BJ548533 K. Sato unpublished cDNA li... 40 0.15
gb|BJ548536.1|BJ548536 BJ548536 K. Sato unpublished cDNA li... 40 0.15
gb|BJ548710.1|BJ548710 BJ548710 K. Sato unpublished cDNA li... 40 0.15
gb|BJ548749.1|BJ548749 BJ548749 K. Sato unpublished cDNA li... 40 0.15
gb|BJ548805.1|BJ548805 BJ548805 K. Sato unpublished cDNA li... 40 0.15
gb|BJ548840.1|BJ548840 BJ548840 K. Sato unpublished cDNA li... 40 0.15
gb|BJ548842.1|BJ548842 BJ548842 K. Sato unpublished cDNA li... 40 0.15
gb|BJ548881.1|BJ548881 BJ548881 K. Sato unpublished cDNA li... 40 0.15
gb|BJ548976.1|BJ548976 BJ548976 K. Sato unpublished cDNA li... 40 0.15
gb|BJ549023.1|BJ549023 BJ549023 K. Sato unpublished cDNA li... 40 0.15
>gb|BQ471126.1|BQ471126 HV01D06T HV Hordeum vulgare subsp. vulgare cDNA clone HV01D06
5-PRIME, mRNA sequence
Length = 629
Score = 309 bits (156), Expect = 1e-082
Identities = 429/518 (82%), Gaps = 4/518 (0%)
Strand = Plus / Plus
Query: 71 agcccattcgtcctgcgggtgaagctcgcgctcagcttcaagggcctgagctacgaggac 130
||||| |||||| |||| | ||||||||||||||||||||||||| |||||| |||||||
Sbjct: 111 agcccgttcgtcatgcgagcgaagctcgcgctcagcttcaagggcttgagcttcgaggac 170
Query: 131 gtggaggaggacctctccggcggcaagagcgagctgctcctcgagtccaacccggtgcac 190
|| |||||||||||| || | |||||||| || ||||||||||||||||||| |||
Sbjct: 171 gtcgaggaggacctcgccaac---aagagcgaactcctcctcgagtccaacccggcgcag 227
Query: 191 aagaaggtgcccgtgctcctccacaacggcaagcctgtgtgcgagtcgcagatcatcgtg 250
|||||||||||||||||| |||| ||||||||||| || ||||| |||||| ||||||||
Sbjct: 228 aagaaggtgcccgtgctcatccataacggcaagcccgtctgcgactcgcaggtcatcgtg 287
Query: 251 cagtacatcgatgaggccttcgccggcactggcccgtcccttctccctgccgacccgcac 310
||||||||||| ||||||||| ||||| || |||| || ||||| |||||||| ||
Sbjct: 288 cagtacatcgacgaggccttcagcggcaacgggacgtctctcctccccgccgacccctac 347
Query: 311 cagcgcgccgtggctcgcttctggggtgcctacattgacgacaagctcctagccttctgg 370
|||||||||| ||||||||||||| |||||| | |||||||||||||| || | |||
Sbjct: 348 gagcgcgccgtcgctcgcttctgggccgcctacgtcgacgacaagctcctggcgtcttgg 407
Query: 371 ctgcaatcagcaagggc-caagacgcaggaggaaaaggccgaggcgctgaagcaggcgct 429
||||| | || ||||| ||||||| ||||||| ||||| |||| ||| |||||| ||||
Sbjct: 408 ctgcaggccgcgagggcgcaagacggaggaggagaaggcggaggggctaaagcagacgct 467
Query: 430 cgccgcggccgagaacctggaggccgccttcacggagatctccgagggcaagcccttctt 489
|| |||| |||| | ||||||| ||||||| || ||| | || ||||| |||||
Sbjct: 468 cgtggcggtggagaccatggaggcggccttcaaggcatgctctaacgggaagcctttctt 527
Query: 490 cggcggcgacagcgtcgggtacctggacgtgacgctgggagcgctggtcgcgtgggtgca 549
|||||||||||| || |||||||||||||||||||| || | ||||||| ||||||||
Sbjct: 528 cggcggcgacagggttgggtacctggacgtgacgctcggcggtctggtcgtctgggtgca 587
Query: 550 cgccgccgagaagctgtacgggatgaggctcttcgacg 587
||||| || | |||||| || ||| |||| |||||||
Sbjct: 588 cgccggcgcggcgctgtatggcatgcggctgttcgacg 625
>gb|AV913623.1|AV913623 AV913623 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags22l18 5', mRNA sequence
Length = 676
Score = 299 bits (151), Expect = 1e-079
Identities = 426/517 (82%), Gaps = 3/517 (0%)
Strand = Plus / Plus
Query: 71 agcccattcgtcctgcgggtgaagctcgcgctcagcttcaagggcctgagctacgaggac 130
||||| |||||| |||| | ||||||||||||||||||||||||| |||||| |||||||
Sbjct: 121 agcccgttcgtcatgcgagcgaagctcgcgctcagcttcaagggcttgagcttcgaggac 180
Query: 131 gtggaggaggacctctccggcggcaagagcgagctgctcctcgagtccaacccggtgcac 190
|| |||||||||||| || | |||||||| || ||||||||||||||||||| |||
Sbjct: 181 gtcgaggaggacctcgccaac---aagagcgaactcctcctcgagtccaacccggcgcag 237
Query: 191 aagaaggtgcccgtgctcctccacaacggcaagcctgtgtgcgagtcgcagatcatcgtg 250
|||||||||||||||||| |||| ||||||||||| || ||||| |||||| ||||||||
Sbjct: 238 aagaaggtgcccgtgctcatccataacggcaagcccgtctgcgactcgcaggtcatcgtg 297
Query: 251 cagtacatcgatgaggccttcgccggcactggcccgtcccttctccctgccgacccgcac 310
||||||||||| ||||||||| ||||| || | || || ||||| |||||||| ||
Sbjct: 298 cagtacatcgacgaggccttcagcggcaacgggacatctctcctccccgccgacccctac 357
Query: 311 cagcgcgccgtggctcgcttctggggtgcctacattgacgacaagctcctagccttctgg 370
|||||||||| ||||||||||||| |||||| | |||||||||||||| || | |||
Sbjct: 358 gagcgcgccgtcgctcgcttctgggccgcctacgtcgacgacaagctcctggcgtcttgg 417
Query: 371 ctgcaatcagcaagggccaagacgcaggaggaaaaggccgaggcgctgaagcaggcgctc 430
||||| | || |||| ||||||| ||||||| ||||| |||| ||| |||||| |||||
Sbjct: 418 ctgcaggccgcgaggggcaagacggaggaggagaaggcggaggggctaaagcagacgctc 477
Query: 431 gccgcggccgagaacctggaggccgccttcacggagatctccgagggcaagcccttcttc 490
| |||| |||| | ||||||| ||||||| || ||| | || ||||| ||||||
Sbjct: 478 gtggcggtggagaccatggaggcggccttcaaggcatgctctaacgggaagcctttcttc 537
Query: 491 ggcggcgacagcgtcgggtacctggacgtgacgctgggagcgctggtcgcgtgggtgcac 550
||||||||||| || |||||||||||||| ||||| || | ||||||| |||||||||
Sbjct: 538 ggcggcgacagggttgggtacctggacgtaacgctcggcggtctggtcgtctgggtgcac 597
Query: 551 gccgccgagaagctgtacgggatgaggctcttcgacg 587
|||| || | |||||| || ||| |||| |||||||
Sbjct: 598 gccggcgcggcgctgtatggcatgcggctgttcgacg 634
>gb|BQ472178.1|BQ472178 HV04K06r HV Hordeum vulgare subsp. vulgare cDNA clone HV04K06
5-PRIME, mRNA sequence
Length = 414
Score = 246 bits (124), Expect = 1e-063
Identities = 249/290 (85%), Gaps = 3/290 (1%)
Strand = Plus / Plus
Query: 71 agcccattcgtcctgcgggtgaagctcgcgctcagcttcaagggcctgagctacgaggac 130
||||| |||||| |||| | ||||||||||||||||||||||||| |||||| |||||||
Sbjct: 111 agcccgttcgtcatgcgagcgaagctcgcgctcagcttcaagggcttgagcttcgaggac 170
Query: 131 gtggaggaggacctctccggcggcaagagcgagctgctcctcgagtccaacccggtgcac 190
|| |||||||||||| || | |||||||| || ||||||||||||||||||| |||
Sbjct: 171 gtcgaggaggacctcgccaac---aagagcgaactcctcctcgagtccaacccggcgcag 227
Query: 191 aagaaggtgcccgtgctcctccacaacggcaagcctgtgtgcgagtcgcagatcatcgtg 250
|||||||||||||||||| |||| ||||||||||| || ||||| |||||| ||||||||
Sbjct: 228 aagaaggtgcccgtgctcatccataacggcaagcccgtctgcgactcgcaggtcatcgtg 287
Query: 251 cagtacatcgatgaggccttcgccggcactggcccgtcccttctccctgccgacccgcac 310
||||||||||| ||||||||| ||||| || |||| || ||||| |||||||| ||
Sbjct: 288 cagtacatcgacgaggccttcagcggcaacgggacgtctctcctccccgccgacccctac 347
Query: 311 cagcgcgccgtggctcgcttctggggtgcctacattgacgacaagctcct 360
|||||||||| ||||||||||||| |||||| | ||||||||||||||
Sbjct: 348 gagcgcgccgtcgctcgcttctgggccgcctacgtcgacgacaagctcct 397
>gb|AL505815.1|AL505815 AL505815 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW09J19V 5', mRNA sequence
Length = 500
Score = 220 bits (111), Expect = 7e-056
Identities = 230/269 (85%), Gaps = 3/269 (1%)
Strand = Plus / Plus
Query: 89 gtgaagctcgcgctcagcttcaagggcctgagctacgaggacgtggaggaggacctctcc 148
||||||||||||||| ||| |||||||||||||||||||||||||||||| |||| |||
Sbjct: 159 gtgaagctcgcgctcgccttgaagggcctgagctacgaggacgtggaggagaacctgtcc 218
Query: 149 ggcggcaagagcgagctgctcctcgagtccaacccggtgcacaagaaggtgcccgtgctc 208
| ||||||||||| |||||| ||||||||||||||||||||||| | |||||||||
Sbjct: 219 aac---aagagcgagctcctcctcaagtccaacccggtgcacaagaagatacccgtgctc 275
Query: 209 ctccacaacggcaagcctgtgtgcgagtcgcagatcatcgtgcagtacatcgatgaggcc 268
||||||||||| || || |||||||| ||||||||||||||||||||| || | |
Sbjct: 276 atccacaacggctccccggtatgcgagtccatgatcatcgtgcagtacatcgacgacgtc 335
Query: 269 ttcgccggcactggcccgtcccttctccctgccgacccgcaccagcgcgccgtggctcgc 328
|||||| |||| ||||||||||||||| | | ||||| || | |||||||||||||||
Sbjct: 336 ttcgccagcaccggcccgtcccttctctccgaggacccctacgaacgcgccgtggctcgc 395
Query: 329 ttctggggtgcctacattgacgacaagct 357
||||||| |||||| |||||||||||||
Sbjct: 396 ttctgggtggcctacgttgacgacaagct 424
>gb|BF625970.2|BF625970 HVSMEa0015B01f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0015B01f, mRNA sequence
Length = 720
Score = 220 bits (111), Expect = 7e-056
Identities = 230/269 (85%), Gaps = 3/269 (1%)
Strand = Plus / Plus
Query: 89 gtgaagctcgcgctcagcttcaagggcctgagctacgaggacgtggaggaggacctctcc 148
||||||||||||||| ||| |||||||||||||||||||||||||||||| |||| |||
Sbjct: 157 gtgaagctcgcgctcgccttgaagggcctgagctacgaggacgtggaggagaacctgtcc 216
Query: 149 ggcggcaagagcgagctgctcctcgagtccaacccggtgcacaagaaggtgcccgtgctc 208
| ||||||||||| |||||| ||||||||||||||||||||||| | |||||||||
Sbjct: 217 aac---aagagcgagctcctcctcaagtccaacccggtgcacaagaagatacccgtgctc 273
Query: 209 ctccacaacggcaagcctgtgtgcgagtcgcagatcatcgtgcagtacatcgatgaggcc 268
||||||||||| || || |||||||| ||||||||||||||||||||| || | |
Sbjct: 274 atccacaacggctccccggtatgcgagtccatgatcatcgtgcagtacatcgacgacgtc 333
Query: 269 ttcgccggcactggcccgtcccttctccctgccgacccgcaccagcgcgccgtggctcgc 328
|||||| |||| ||||||||||||||| | | ||||| || | |||||||||||||||
Sbjct: 334 ttcgccagcaccggcccgtcccttctctccgaggacccctacgaacgcgccgtggctcgc 393
Query: 329 ttctggggtgcctacattgacgacaagct 357
||||||| |||||| |||||||||||||
Sbjct: 394 ttctgggtggcctacgttgacgacaagct 422
>gb|BF622591.2|BF622591 HVSMEa0007C21f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0007C21f, mRNA sequence
Length = 694
Score = 212 bits (107), Expect = 2e-053
Identities = 229/269 (85%), Gaps = 3/269 (1%)
Strand = Plus / Plus
Query: 89 gtgaagctcgcgctcagcttcaagggcctgagctacgaggacgtggaggaggacctctcc 148
||||||||||||||| ||| |||||||||||||||||||||||||||||| |||| |||
Sbjct: 144 gtgaagctcgcgctcgccttgaagggcctgagctacgaggacgtggaggagaacctgtcc 203
Query: 149 ggcggcaagagcgagctgctcctcgagtccaacccggtgcacaagaaggtgcccgtgctc 208
| ||||||||||| |||||| ||||||||||||||||||||||| | |||||||||
Sbjct: 204 aac---aagagcgagctcctcctcaagtccaacccggtgcacaagaagatacccgtgctc 260
Query: 209 ctccacaacggcaagcctgtgtgcgagtcgcagatcatcgtgcagtacatcgatgaggcc 268
||||||||||| || || |||||||| ||||||||||||||||||||| || | |
Sbjct: 261 atccacaacggctccccggtatgcgagtccatgatcatcgtgcagtacatcgacgacgtc 320
Query: 269 ttcgccggcactggcccgtcccttctccctgccgacccgcaccagcgcgccgtggctcgc 328
|||||| |||| |||||||||||||| | | ||||| || | |||||||||||||||
Sbjct: 321 ttcgccagcaccggcccgtcccttctgtccgaggacccctacgaacgcgccgtggctcgc 380
Query: 329 ttctggggtgcctacattgacgacaagct 357
||||||| |||||| |||||||||||||
Sbjct: 381 ttctgggtggcctacgttgacgacaagct 409
>gb|BF259796.2|BF259796 HVSMEf0020E15f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0020E15f, mRNA sequence
Length = 532
Score = 210 bits (106), Expect = 7e-053
Identities = 337/414 (81%)
Strand = Plus / Plus
Query: 174 agtccaacccggtgcacaagaaggtgcccgtgctcctccacaacggcaagcctgtgtgcg 233
|||||||||||| ||| |||||||||||||||||| |||| ||||||||||| || ||||
Sbjct: 5 agtccaacccggcgcaaaagaaggtgcccgtgctcatccataacggcaagcccgtctgcg 64
Query: 234 agtcgcagatcatcgtgcagtacatcgatgaggccttcgccggcactggcccgtcccttc 293
| |||||| ||||||||||||||||||| ||||||||| ||||| || |||| || |
Sbjct: 65 actcgcaggtcatcgtgcagtacatcgacgaggccttcagcggcaacgggacgtctctcc 124
Query: 294 tccctgccgacccgcaccagcgcgccgtggctcgcttctggggtgcctacattgacgaca 353
|||| |||||||| || |||||||||| ||||||||||||| | |||| | |||||||
Sbjct: 125 tccccgccgacccctacaagcgcgccgtcgctcgcttctgggccgtctacgtcgacgaca 184
Query: 354 agctcctagccttctggctgcaatcagcaagggccaagacgcaggaggaaaaggccgagg 413
||||||| || | |||||||| | || |||| ||||||| | ||||| ||||| ||||
Sbjct: 185 agctcctggcgtcttggctgcaggccgcgaggggcaagacggaagaggagaaggcggagg 244
Query: 414 cgctgaagcaggcgctcgccgcggccgagaacctggaggccgccttcacggagatctccg 473
||| |||||| |||||| |||| |||| | ||||||| ||||||| || |||
Sbjct: 245 ggctaaagcagacgctcgtggcggtggagaccatggaggcggccttcaaggcatgctcta 304
Query: 474 agggcaagcccttcttcggcggcgacagcgtcgggtacctggacgtgacgctgggagcgc 533
| || ||||| ||||||||||||||||| || |||||||||||||||||||| || | |
Sbjct: 305 acgggaagcctttcttcggcggcgacagggttgggtacctggacgtgacgctcggcggtc 364
Query: 534 tggtcgcgtgggtgcacgccgccgagaagctgtacgggatgaggctcttcgacg 587
||||| ||||||||||||| || | |||||| || ||| |||| |||||||
Sbjct: 365 tggtcctctgggtgcacgccggcgcggcgctgtatggcatgcggctgttcgacg 418
>gb|AL504826.1|AL504826 AL504826 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW06I07V 5', mRNA sequence
Length = 394
Score = 186 bits (94), Expect = 1e-045
Identities = 208/246 (84%), Gaps = 3/246 (1%)
Strand = Plus / Plus
Query: 89 gtgaagctcgcgctcagcttcaagggcctgagctacgaggacgtggaggaggacctctcc 148
||||||||||||||| ||| |||||||||||||||||||||||||||||| |||| |||
Sbjct: 137 gtgaagctcgcgctcgccttgaagggcctgagctacgaggacgtggaggagaacctgtcc 196
Query: 149 ggcggcaagagcgagctgctcctcgagtccaacccggtgcacaagaaggtgcccgtgctc 208
| ||||||||||| |||||| ||||||||||||||||||||||| | |||||||||
Sbjct: 197 aac---aagagcgagctcctcctcaagtccaacccggtgcacaagaagatacccgtgctc 253
Query: 209 ctccacaacggcaagcctgtgtgcgagtcgcagatcatcgtgcagtacatcgatgaggcc 268
||||||||||| || | |||||||| ||||||||||||||||||||| || | |
Sbjct: 254 atccacaacggctccccggnatgcgagtccatgatcatcgtgcagtacatcgacgacgtc 313
Query: 269 ttcgccggcactggcccgtcccttctccctgccgacccgcaccagcgcgccgtggctcgc 328
|||||| |||| ||||||||||||||| | ||||| || | |||||||||||||||
Sbjct: 314 ttcgccagcaccggcccgtcccttctctncgaggacccctacgaacgcgccgtggctcgc 373
Query: 329 ttctgg 334
||||||
Sbjct: 374 ttctgg 379
>gb|CA012122.1|CA012122 HT04I07r HT Hordeum vulgare subsp. vulgare cDNA clone HT04I07
5-PRIME, mRNA sequence
Length = 452
Score = 178 bits (90), Expect = 2e-043
Identities = 304/374 (81%), Gaps = 1/374 (0%)
Strand = Plus / Plus
Query: 215 aacggcaagcctgtgtgcgagtcgcagatcatcgtgcagtacatcgatgaggccttcgcc 274
||||||||||| || ||||| |||||| ||||||||||||||||||| ||||||||| |
Sbjct: 12 aacggcaagcccgtctgcgactcgcaggtcatcgtgcagtacatcgacgaggccttcagc 71
Query: 275 ggcactggcccgtcccttctccctgccgacccgcaccagcgcgccgtggctcgcttctgg 334
|||| || |||| || ||||| |||||||| || |||||||||| ||||||||||||
Sbjct: 72 ggcaacgggacgtctctcctccccgccgacccctacgagcgcgccgtcgctcgcttctgg 131
Query: 335 ggtgcctacattgacgacaagctcctagccttctggctgcaatcagcaagggc-caagac 393
| |||||| | |||||||||||||| || | |||||||| | || ||||| ||||||
Sbjct: 132 gccgcctacgtcgacgacaagctcctggcgtcttggctgcaggccgcgagggcgcaagac 191
Query: 394 gcaggaggaaaaggccgaggcgctgaagcaggcgctcgccgcggccgagaacctggaggc 453
| ||||||| ||||| |||| ||| |||||| |||||| |||| |||| | |||||||
Sbjct: 192 ggaggaggagaaggcggaggggctaaagcagacgctcgtggcggtggagaccatggaggc 251
Query: 454 cgccttcacggagatctccgagggcaagcccttcttcggcggcgacagcgtcgggtacct 513
||||||| || ||| | || ||||| ||||||||||||||||| || ||||||||
Sbjct: 252 ggccttcaaggcatgctctaacgggaagcctttcttcggcggcgacagggttgggtacct 311
Query: 514 ggacgtgacgctgggagcgctggtcgcgtgggtgcacgccgccgagaagctgtacgggat 573
|||||||||||| || | ||||||| ||||||||||||| || | |||||| || ||
Sbjct: 312 ggacgtgacgctcggcggtctggtcgtctgggtgcacgccggcgcggcgctgtatggcat 371
Query: 574 gaggctcttcgacg 587
| |||| |||||||
Sbjct: 372 gcggctgttcgacg 385
>gb|BF623190.3|BF623190 HVSMEa0015C04f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0015C04f, mRNA sequence
Length = 826
Score = 170 bits (86), Expect = 6e-041
Identities = 208/248 (83%), Gaps = 3/248 (1%)
Strand = Plus / Plus
Query: 110 aagggcctgagctacgaggacgtggaggaggacctctccggcggcaagagcgagctgctc 169
||||||||||||||||| |||||||||||| |||| ||| | ||||||||||| ||
Sbjct: 182 aagggcctgagctacgaagacgtggaggagaacctgtccaac---aagagcgagctcctt 238
Query: 170 ctcgagtccaacccggtgcacaagaaggtgcccgtgctcctccacaacggcaagcctgtg 229
||| ||||||||||||||||||||||| | ||||||||| ||||||||||| || ||
Sbjct: 239 ctcaagtccaacccggtgcacaagaagatacccgtgctcatccacaacggctccccggta 298
Query: 230 tgcgagtcgcagatcatcgtgcagtacatcgatgaggccttcgccggcactggcccgtcc 289
|||||||| ||||||||||||||||||||| || | ||||| | |||| |||||||||
Sbjct: 299 tgcgagtccatgatcatcgtgcagtacatcgacgacgtcttcgacagcaccggcccgtcc 358
Query: 290 cttctccctgccgacccgcaccagcgcgccgtggctcgcttctggggtgcctacattgac 349
|||||| | | ||||| || | |||||||||||||||||||||| | |||| |||||
Sbjct: 359 cttctctccgaggacccctacgaacgcgccgtggctcgcttctgggtgggctacgttgac 418
Query: 350 gacaagct 357
||||||||
Sbjct: 419 gacaagct 426
>gb|BQ467879.1|BQ467879 HR01D11r HR Hordeum vulgare subsp. vulgare cDNA clone HR01D11
5-PRIME, mRNA sequence
Length = 500
Score = 157 bits (79), Expect = 9e-037
Identities = 219/265 (82%), Gaps = 3/265 (1%)
Strand = Plus / Plus
Query: 93 agctcgcgctcagcttcaagggcctgagctacgaggacgtggaggaggacctctccggcg 152
||||||||||| || |||||||| ||| ||||||| |||| |||||||| ||| || |
Sbjct: 139 agctcgcgctccgcctcaagggcgtgaactacgagtacgtcgaggaggagctcgccaac- 197
Query: 153 gcaagagcgagctgctcctcgagtccaacccggtgcacaagaaggtgcccgtgctcctcc 212
|||||||| || ||||| ||||||||||| ||||||| ||| ||||||||| |||
Sbjct: 198 --aagagcgacctcttcctccgctccaacccggtacacaagacggttcccgtgctcatcc 255
Query: 213 acaacggcaagcctgtgtgcgagtcgcagatcatcgtgcagtacatcgatgaggccttcg 272
|| |||||||||| | |||||||| ||| ||||| ||||||||||||| ||||||||||
Sbjct: 256 acgacggcaagcccatctgcgagtcccaggtcatcctgcagtacatcgacgaggccttcg 315
Query: 273 ccggcactggcccgtcccttctccctgccgacccgcaccagcgcgccgtggctcgcttct 332
||||| ||||||||||| ||||| |||||||| || |||||||||| || |||||||
Sbjct: 316 ccggcgtcggcccgtccctcctccccgccgacccctacgagcgcgccgtcgcgcgcttct 375
Query: 333 ggggtgcctacattgacgacaagct 357
||| |||||| | || ||||||||
Sbjct: 376 gggccgcctacgtcgaagacaagct 400
>gb|AV918927.1|AV918927 AV918927 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags22l18 3', mRNA sequence
Length = 584
Score = 155 bits (78), Expect = 4e-036
Identities = 288/358 (80%)
Strand = Plus / Minus
Query: 230 tgcgagtcgcagatcatcgtgcagtacatcgatgaggccttcgccggcactggcccgtcc 289
||||| |||||| ||||||||||||||||||| ||||||||| ||||| || | ||
Sbjct: 581 tgcgactcgcaggtcatcgtgcagtacatcgacgaggccttcagcggcaacgggacatct 522
Query: 290 cttctccctgccgacccgcaccagcgcgccgtggctcgcttctggggtgcctacattgac 349
|| ||||| |||||||| || |||||||||| ||||||||||||| |||||| | |||
Sbjct: 521 ctcctccccgccgacccctacgagcgcgccgtcgctcgcttctgggccgcctacgtcgac 462
Query: 350 gacaagctcctagccttctggctgcaatcagcaagggccaagacgcaggaggaaaaggcc 409
||||||||||| || | |||||||| | || |||| ||||||| ||||||| |||||
Sbjct: 461 gacaagctcctggcgtcttggctgcaggccgcgaggggcaagacggaggaggagaaggcg 402
Query: 410 gaggcgctgaagcaggcgctcgccgcggccgagaacctggaggccgccttcacggagatc 469
|||| ||| |||||| |||||| |||| |||| | ||||||| ||||||| || |
Sbjct: 401 gaggggctaaagcagacgctcgtggcggtggagaccatggaggcggccttcaaggcatgc 342
Query: 470 tccgagggcaagcccttcttcggcggcgacagcgtcgggtacctggacgtgacgctggga 529
|| | || ||||| ||||||||||||||||| || |||||||||||||| ||||| ||
Sbjct: 341 tctaacgggaagcctttcttcggcggcgacagggttgggtacctggacgtaacgctcggc 282
Query: 530 gcgctggtcgcgtgggtgcacgccgccgagaagctgtacgggatgaggctcttcgacg 587
| ||||||| ||||||||||||| || | |||||| || ||| |||| |||||||
Sbjct: 281 ggtctggtcgtctgggtgcacgccggcgcggcgctgtatggcatgcggctgttcgacg 224
>gb|BM817225.1|BM817225 HC109B04_T3.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC109B04_T3.ab1 similar to Glutathione
transferase,Glycoprotein-fucosylgalactoside
alpha-galactosyltransferase,, mRNA sequence
Length = 897
Score = 149 bits (75), Expect = 2e-034
Identities = 218/265 (82%), Gaps = 3/265 (1%)
Strand = Plus / Plus
Query: 93 agctcgcgctcagcttcaagggcctgagctacgaggacgtggaggaggacctctccggcg 152
||||||||||| || |||||||| ||| ||||||| |||| |||||||| ||| || |
Sbjct: 162 agctcgcgctccgcctcaagggcgtgaactacgagtacgtcgaggaggagctcgccaac- 220
Query: 153 gcaagagcgagctgctcctcgagtccaacccggtgcacaagaaggtgcccgtgctcctcc 212
|||||||| || ||||| ||||||||||| ||||||| ||| ||||||||| |||
Sbjct: 221 --aagagcgacctcttcctccgctccaacccggtacacaagacggttcccgtgctcatcc 278
Query: 213 acaacggcaagcctgtgtgcgagtcgcagatcatcgtgcagtacatcgatgaggccttcg 272
|| |||||||||| | |||||||| ||| ||||| ||||||||||||| ||||||||||
Sbjct: 279 acgacggcaagcccatctgcgagtcccaggtcatcctgcagtacatcgacgaggccttcg 338
Query: 273 ccggcactggcccgtcccttctccctgccgacccgcaccagcgcgccgtggctcgcttct 332
||||| ||||||||||| ||||| ||||| || || |||||||||| || |||||||
Sbjct: 339 ccggcgtcggcccgtccctcctccccgccgatccctacgagcgcgccgtcgcgcgcttct 398
Query: 333 ggggtgcctacattgacgacaagct 357
||| |||||| | || ||||||||
Sbjct: 399 gggccgcctacgtcgaagacaagct 423
Score = 46.1 bits (23), Expect = 0.002
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 485 ttcttcggcggcgacagcgtcgggtac 511
||||||||||||||| |||||||||||
Sbjct: 551 ttcttcggcggcgactgcgtcgggtac 577
>gb|AL503324.1|AL503324 AL503324 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW01K08T 5', mRNA sequence
Length = 700
Score = 147 bits (74), Expect = 9e-034
Identities = 223/272 (81%), Gaps = 3/272 (1%)
Strand = Plus / Plus
Query: 87 gggtgaagctcgcgctcagcttcaagggcctgagctacgaggacgtggaggaggacctct 146
|||||||||| ||||| ||| ||||||||||||||| |||||| || |||||||||||
Sbjct: 102 gggtgaagcttgcgctgagcctcaagggcctgagcttcgaggatgtcgaggaggacctg- 160
Query: 147 ccggcggcaagagcgagctgctcctcgagtccaacccggtgcacaagaaggtgcccgtgc 206
||| |||||||||||| |||||| || ||||| ||||||||||||||||| ||||
Sbjct: 161 --ggcaacaagagcgagctcctcctcagctcgaacccagtgcacaagaaggtgccagtgc 218
Query: 207 tcctccacaacggcaagcctgtgtgcgagtcgcagatcatcgtgcagtacatcgatgagg 266
|| | ||||| || ||||| ||||||||||| ||||||| | ||||||||||||||||
Sbjct: 219 tcgttcacaatggaaagcccgtgtgcgagtcagtgatcatccttcagtacatcgatgagg 278
Query: 267 ccttcgccggcactggcccgtcccttctccctgccgacccgcaccagcgcgccgtggctc 326
| |||||||||| || || || || || || | ||||| |||| || ||||| || |
Sbjct: 279 cgttcgccggcatcggtccctctctccttccctctgacccctaccaacgtgccgttgccc 338
Query: 327 gcttctggggtgcctacattgacgacaagctc 358
||||||||| |||||||| ||||||||||||
Sbjct: 339 gcttctgggccgcctacatcgacgacaagctc 370
>gb|BF622224.2|BF622224 HVSMEa0002C05f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0002C05f, mRNA sequence
Length = 705
Score = 147 bits (74), Expect = 9e-034
Identities = 223/272 (81%), Gaps = 3/272 (1%)
Strand = Plus / Plus
Query: 87 gggtgaagctcgcgctcagcttcaagggcctgagctacgaggacgtggaggaggacctct 146
|||||||||| ||||| ||| ||||||||||||||| |||||| || |||||||||||
Sbjct: 119 gggtgaagcttgcgctgagcctcaagggcctgagcttcgaggatgtcgaggaggacctg- 177
Query: 147 ccggcggcaagagcgagctgctcctcgagtccaacccggtgcacaagaaggtgcccgtgc 206
||| |||||||||||| |||||| || ||||| ||||||||||||||||| ||||
Sbjct: 178 --ggcaacaagagcgagctcctcctcagctcgaacccagtgcacaagaaggtgccagtgc 235
Query: 207 tcctccacaacggcaagcctgtgtgcgagtcgcagatcatcgtgcagtacatcgatgagg 266
|| | ||||| || ||||| ||||||||||| ||||||| | ||||||||||||||||
Sbjct: 236 tcgttcacaatggaaagcccgtgtgcgagtcagtgatcatccttcagtacatcgatgagg 295
Query: 267 ccttcgccggcactggcccgtcccttctccctgccgacccgcaccagcgcgccgtggctc 326
| |||||||||| || || || || || || | ||||| |||| || ||||| || |
Sbjct: 296 cgttcgccggcatcggtccctctctccttccctctgacccctaccaacgtgccgttgccc 355
Query: 327 gcttctggggtgcctacattgacgacaagctc 358
||||||||| |||||||| ||||||||||||
Sbjct: 356 gcttctgggccgcctacatcgacgacaagctc 387
>gb|BF622512.2|BF622512 HVSMEa0004K18f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0004K18f, mRNA sequence
Length = 487
Score = 147 bits (74), Expect = 9e-034
Identities = 223/272 (81%), Gaps = 3/272 (1%)
Strand = Plus / Plus
Query: 87 gggtgaagctcgcgctcagcttcaagggcctgagctacgaggacgtggaggaggacctct 146
|||||||||| ||||| ||| ||||||||||||||| |||||| || |||||||||||
Sbjct: 117 gggtgaagcttgcgctgagcctcaagggcctgagcttcgaggatgtcgaggaggacctg- 175
Query: 147 ccggcggcaagagcgagctgctcctcgagtccaacccggtgcacaagaaggtgcccgtgc 206
||| |||||||||||| |||||| || ||||| ||||||||||||||||| ||||
Sbjct: 176 --ggcaacaagagcgagctcctcctcagctcgaacccagtgcacaagaaggtgccagtgc 233
Query: 207 tcctccacaacggcaagcctgtgtgcgagtcgcagatcatcgtgcagtacatcgatgagg 266
|| | ||||| || ||||| ||||||||||| ||||||| | ||||||||||||||||
Sbjct: 234 tcgttcacaatggaaagcccgtgtgcgagtcagtgatcatccttcagtacatcgatgagg 293
Query: 267 ccttcgccggcactggcccgtcccttctccctgccgacccgcaccagcgcgccgtggctc 326
| |||||||||| || || || || || || | ||||| |||| || ||||| || |
Sbjct: 294 cgttcgccggcatcggtccctctctccttccctctgacccctaccaacgtgccgttgccc 353
Query: 327 gcttctggggtgcctacattgacgacaagctc 358
||||||||| |||||||| ||||||||||||
Sbjct: 354 gcttctgggccgcctacatcgacgacaagctc 385
>gb|BF621550.2|BF621550 HVSMEa0011F24f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0011F24f, mRNA sequence
Length = 808
Score = 147 bits (74), Expect = 9e-034
Identities = 223/272 (81%), Gaps = 3/272 (1%)
Strand = Plus / Plus
Query: 87 gggtgaagctcgcgctcagcttcaagggcctgagctacgaggacgtggaggaggacctct 146
|||||||||| ||||| ||| ||||||||||||||| |||||| || |||||||||||
Sbjct: 120 gggtgaagcttgcgctgagcctcaagggcctgagcttcgaggatgtcgaggaggacctg- 178
Query: 147 ccggcggcaagagcgagctgctcctcgagtccaacccggtgcacaagaaggtgcccgtgc 206
||| |||||||||||| |||||| || ||||| ||||||||||||||||| ||||
Sbjct: 179 --ggcaacaagagcgagctcctcctcagctcgaacccagtgcacaagaaggtgccagtgc 236
Query: 207 tcctccacaacggcaagcctgtgtgcgagtcgcagatcatcgtgcagtacatcgatgagg 266
|| | ||||| || ||||| ||||||||||| ||||||| | ||||||||||||||||
Sbjct: 237 tcgttcacaatggaaagcccgtgtgcgagtcagtgatcatccttcagtacatcgatgagg 296
Query: 267 ccttcgccggcactggcccgtcccttctccctgccgacccgcaccagcgcgccgtggctc 326
| |||||||||| || || || || || || | ||||| |||| || ||||| || |
Sbjct: 297 cgttcgccggcatcggtccctctctccttccctctgacccctaccaacgtgccgttgccc 356
Query: 327 gcttctggggtgcctacattgacgacaagctc 358
||||||||| |||||||| ||||||||||||
Sbjct: 357 gcttctgggccgcctacatcgacgacaagctc 388
>gb|BF624202.2|BF624202 HVSMEa0012J22f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0012J22f, mRNA sequence
Length = 487
Score = 147 bits (74), Expect = 9e-034
Identities = 223/272 (81%), Gaps = 3/272 (1%)
Strand = Plus / Plus
Query: 87 gggtgaagctcgcgctcagcttcaagggcctgagctacgaggacgtggaggaggacctct 146
|||||||||| ||||| ||| ||||||||||||||| |||||| || |||||||||||
Sbjct: 125 gggtgaagcttgcgctgagcctcaagggcctgagcttcgaggatgtcgaggaggacctg- 183
Query: 147 ccggcggcaagagcgagctgctcctcgagtccaacccggtgcacaagaaggtgcccgtgc 206
||| |||||||||||| |||||| || ||||| ||||||||||||||||| ||||
Sbjct: 184 --ggcaacaagagcgagctcctcctcagctcgaacccagtgcacaagaaggtgccagtgc 241
Query: 207 tcctccacaacggcaagcctgtgtgcgagtcgcagatcatcgtgcagtacatcgatgagg 266
|| | ||||| || ||||| ||||||||||| ||||||| | ||||||||||||||||
Sbjct: 242 tcgttcacaatggaaagcccgtgtgcgagtcagtgatcatccttcagtacatcgatgagg 301
Query: 267 ccttcgccggcactggcccgtcccttctccctgccgacccgcaccagcgcgccgtggctc 326
| |||||||||| || || || || || || | ||||| |||| || ||||| || |
Sbjct: 302 cgttcgccggcatcggtccctctctccttccctctgacccctaccaacgtgccgttgccc 361
Query: 327 gcttctggggtgcctacattgacgacaagctc 358
||||||||| |||||||| ||||||||||||
Sbjct: 362 gcttctgggccgcctacatcgacgacaagctc 393
>gb|BF624618.2|BF624618 HVSMEa0017E14f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0017E14f, mRNA sequence
Length = 887
Score = 147 bits (74), Expect = 9e-034
Identities = 223/272 (81%), Gaps = 3/272 (1%)
Strand = Plus / Plus
Query: 87 gggtgaagctcgcgctcagcttcaagggcctgagctacgaggacgtggaggaggacctct 146
|||||||||| ||||| ||| ||||||||||||||| |||||| || |||||||||||
Sbjct: 117 gggtgaagcttgcgctgagcctcaagggcctgagcttcgaggatgtcgaggaggacctg- 175
Query: 147 ccggcggcaagagcgagctgctcctcgagtccaacccggtgcacaagaaggtgcccgtgc 206
||| |||||||||||| |||||| || ||||| ||||||||||||||||| ||||
Sbjct: 176 --ggcaacaagagcgagctcctcctcagctcgaacccagtgcacaagaaggtgccagtgc 233
Query: 207 tcctccacaacggcaagcctgtgtgcgagtcgcagatcatcgtgcagtacatcgatgagg 266
|| | ||||| || ||||| ||||||||||| ||||||| | ||||||||||||||||
Sbjct: 234 tcgttcacaatggaaagcccgtgtgcgagtcagtgatcatccttcagtacatcgatgagg 293
Query: 267 ccttcgccggcactggcccgtcccttctccctgccgacccgcaccagcgcgccgtggctc 326
| |||||||||| || || || || || || | ||||| |||| || ||||| || |
Sbjct: 294 cgttcgccggcatcggtccctctctccttccctctgacccctaccaacgtgccgttgccc 353
Query: 327 gcttctggggtgcctacattgacgacaagctc 358
||||||||| |||||||| ||||||||||||
Sbjct: 354 gcttctgggccgcctacatcgacgacaagctc 385
>gb|BG299731.1|BG299731 HVSMEa0021J09f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0021J09f, mRNA sequence
Length = 569
Score = 147 bits (74), Expect = 9e-034
Identities = 223/272 (81%), Gaps = 3/272 (1%)
Strand = Plus / Plus
Query: 87 gggtgaagctcgcgctcagcttcaagggcctgagctacgaggacgtggaggaggacctct 146
|||||||||| ||||| ||| ||||||||||||||| |||||| || |||||||||||
Sbjct: 111 gggtgaagcttgcgctgagcctcaagggcctgagcttcgaggatgtcgaggaggacctg- 169
Query: 147 ccggcggcaagagcgagctgctcctcgagtccaacccggtgcacaagaaggtgcccgtgc 206
||| |||||||||||| |||||| || ||||| ||||||||||||||||| ||||
Sbjct: 170 --ggcaacaagagcgagctcctcctcagctcgaacccagtgcacaagaaggtgccagtgc 227
Query: 207 tcctccacaacggcaagcctgtgtgcgagtcgcagatcatcgtgcagtacatcgatgagg 266
|| | ||||| || ||||| ||||||||||| ||||||| | ||||||||||||||||
Sbjct: 228 tcgttcacaatggaaagcccgtgtgcgagtcagtgatcatccttcagtacatcgatgagg 287
Query: 267 ccttcgccggcactggcccgtcccttctccctgccgacccgcaccagcgcgccgtggctc 326
| |||||||||| || || || || || || | ||||| |||| || ||||| || |
Sbjct: 288 cgttcgccggcatcggtccctctctccttccctctgacccctaccaacgtgccgttgccc 347
Query: 327 gcttctggggtgcctacattgacgacaagctc 358
||||||||| |||||||| ||||||||||||
Sbjct: 348 gcttctgggccgcctacatcgacgacaagctc 379
>gb|BF621862.3|BF621862 HVSMEa0001C05f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0001C05f, mRNA sequence
Length = 595
Score = 147 bits (74), Expect = 9e-034
Identities = 223/272 (81%), Gaps = 3/272 (1%)
Strand = Plus / Plus
Query: 87 gggtgaagctcgcgctcagcttcaagggcctgagctacgaggacgtggaggaggacctct 146
|||||||||| ||||| ||| ||||||||||||||| |||||| || |||||||||||
Sbjct: 122 gggtgaagcttgcgctgagcctcaagggcctgagcttcgaggatgtcgaggaggacctg- 180
Query: 147 ccggcggcaagagcgagctgctcctcgagtccaacccggtgcacaagaaggtgcccgtgc 206
||| |||||||||||| |||||| || ||||| ||||||||||||||||| ||||
Sbjct: 181 --ggcaacaagagcgagctcctcctcagctcgaacccagtgcacaagaaggtgccagtgc 238
Query: 207 tcctccacaacggcaagcctgtgtgcgagtcgcagatcatcgtgcagtacatcgatgagg 266
|| | ||||| || ||||| ||||||||||| ||||||| | ||||||||||||||||
Sbjct: 239 tcgttcacaatggaaagcccgtgtgcgagtcagtgatcatccttcagtacatcgatgagg 298
Query: 267 ccttcgccggcactggcccgtcccttctccctgccgacccgcaccagcgcgccgtggctc 326
| |||||||||| || || || || || || | ||||| |||| || ||||| || |
Sbjct: 299 cgttcgccggcatcggtccctctctccttccctctgacccctaccaacgtgccgttgccc 358
Query: 327 gcttctggggtgcctacattgacgacaagctc 358
||||||||| |||||||| ||||||||||||
Sbjct: 359 gcttctgggccgcctacatcgacgacaagctc 390
>gb|BF622215.3|BF622215 HVSMEa0002A20f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0002A20f, mRNA sequence
Length = 846
Score = 147 bits (74), Expect = 9e-034
Identities = 223/272 (81%), Gaps = 3/272 (1%)
Strand = Plus / Plus
Query: 87 gggtgaagctcgcgctcagcttcaagggcctgagctacgaggacgtggaggaggacctct 146
|||||||||| ||||| ||| ||||||||||||||| |||||| || |||||||||||
Sbjct: 122 gggtgaagcttgcgctgagcctcaagggcctgagcttcgaggatgtcgaggaggacctg- 180
Query: 147 ccggcggcaagagcgagctgctcctcgagtccaacccggtgcacaagaaggtgcccgtgc 206
||| |||||||||||| |||||| || ||||| ||||||||||||||||| ||||
Sbjct: 181 --ggcaacaagagcgagctcctcctcagctcgaacccagtgcacaagaaggtgccagtgc 238
Query: 207 tcctccacaacggcaagcctgtgtgcgagtcgcagatcatcgtgcagtacatcgatgagg 266
|| | ||||| || ||||| ||||||||||| ||||||| | ||||||||||||||||
Sbjct: 239 tcgttcacaatggaaagcccgtgtgcgagtcagtgatcatccttcagtacatcgatgagg 298
Query: 267 ccttcgccggcactggcccgtcccttctccctgccgacccgcaccagcgcgccgtggctc 326
| |||||||||| || || || || || || | ||||| |||| || ||||| || |
Sbjct: 299 cgttcgccggcatcggtccctctctccttccctctgacccctaccaacgtgccgttgccc 358
Query: 327 gcttctggggtgcctacattgacgacaagctc 358
||||||||| |||||||| ||||||||||||
Sbjct: 359 gcttctgggccgcctacatcgacgacaagctc 390
>gb|BF631562.2|BF631562 HVSMEb0016G15f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0016G15f, mRNA sequence
Length = 830
Score = 147 bits (74), Expect = 9e-034
Identities = 211/256 (82%), Gaps = 3/256 (1%)
Strand = Plus / Plus
Query: 22 aatggccggaggaggtgacgatgaactcaagctgctgggggcgtgggcgagcccattcgt 81
||||||||||||||| |||| || | ||||||||||| |||||||||||| |||||
Sbjct: 24 aatggccggaggaggaaacgacgaggtgaagctgctgggcatgtgggcgagcccgttcgt 83
Query: 82 cctgcgggtgaagctcgcgctcagcttcaagggcctgagctacgaggacgtggaggagga 141
||| || | ||||||||||||||| |||||||| | ||||||| ||||||| |||||
Sbjct: 84 ccttcgaatcaagctcgcgctcagcctcaagggcgtcgcctacgagtacgtggaagagga 143
Query: 142 cctctccggcggcaagagcgagctgctcctcgagtccaacccggtgcacaagaaggtgcc 201
|||| || |||||||||||||||||| ||||||||| |||| | ||||||||||
Sbjct: 144 cctcaagagc---aagagcgagctgctcctcaggtccaaccccgtgctccagaaggtgcc 200
Query: 202 cgtgctcctccacaacggcaagcctgtgtgcgagtcgcagatcatcgtgcagtacatcga 261
|||||| ||||| |||||||||| || | ||||||| | ||||| |||||||||| ||
Sbjct: 201 ggtgctcatccacgacggcaagcccgtctccgagtcgtcggtcatcctgcagtacattga 260
Query: 262 tgaggccttcgccggc 277
|||||||||||||||
Sbjct: 261 cgaggccttcgccggc 276
>gb|BF629286.3|BF629286 HVSMEb0010K15f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0010K15f, mRNA sequence
Length = 749
Score = 147 bits (74), Expect = 9e-034
Identities = 223/272 (81%), Gaps = 3/272 (1%)
Strand = Plus / Plus
Query: 87 gggtgaagctcgcgctcagcttcaagggcctgagctacgaggacgtggaggaggacctct 146
|||||||||| ||||| ||| ||||||||||||||| |||||| || |||||||||||
Sbjct: 122 gggtgaagcttgcgctgagcctcaagggcctgagcttcgaggatgtcgaggaggacctg- 180
Query: 147 ccggcggcaagagcgagctgctcctcgagtccaacccggtgcacaagaaggtgcccgtgc 206
||| |||||||||||| |||||| || ||||| ||||||||||||||||| ||||
Sbjct: 181 --ggcaacaagagcgagctcctcctcagctcgaacccagtgcacaagaaggtgccagtgc 238
Query: 207 tcctccacaacggcaagcctgtgtgcgagtcgcagatcatcgtgcagtacatcgatgagg 266
|| | ||||| || ||||| ||||||||||| ||||||| | ||||||||||||||||
Sbjct: 239 tcgttcacaatggaaagcccgtgtgcgagtcagtgatcatccttcagtacatcgatgagg 298
Query: 267 ccttcgccggcactggcccgtcccttctccctgccgacccgcaccagcgcgccgtggctc 326
| |||||||||| || || || || || || | ||||| |||| || ||||| || |
Sbjct: 299 cgttcgccggcatcggtccctctctccttccctctgacccctaccaacgtgccgttgccc 358
Query: 327 gcttctggggtgcctacattgacgacaagctc 358
||||||||| |||||||| ||||||||||||
Sbjct: 359 gcttctgggccgcctacatcgacgacaagctc 390
>gb|BQ466487.1|BQ466487 HT02K21r HT Hordeum vulgare subsp. vulgare cDNA clone HT02K21
5-PRIME, mRNA sequence
Length = 535
Score = 147 bits (74), Expect = 9e-034
Identities = 223/272 (81%), Gaps = 3/272 (1%)
Strand = Plus / Plus
Query: 87 gggtgaagctcgcgctcagcttcaagggcctgagctacgaggacgtggaggaggacctct 146
|||||||||| ||||| ||| ||||||||||||||| |||||| || |||||||||||
Sbjct: 128 gggtgaagcttgcgctgagcctcaagggcctgagcttcgaggatgtcgaggaggacctg- 186
Query: 147 ccggcggcaagagcgagctgctcctcgagtccaacccggtgcacaagaaggtgcccgtgc 206
||| |||||||||||| |||||| || ||||| ||||||||||||||||| ||||
Sbjct: 187 --ggcaacaagagcgagctcctcctcagctcgaacccagtgcacaagaaggtgccagtgc 244
Query: 207 tcctccacaacggcaagcctgtgtgcgagtcgcagatcatcgtgcagtacatcgatgagg 266
|| | ||||| || ||||| ||||||||||| ||||||| | ||||||||||||||||
Sbjct: 245 tcgttcacaatggaaagcccgtgtgcgagtcagtgatcatccttcagtacatcgatgagg 304
Query: 267 ccttcgccggcactggcccgtcccttctccctgccgacccgcaccagcgcgccgtggctc 326
| |||||||||| || || || || || || | ||||| |||| || ||||| || |
Sbjct: 305 cgttcgccggcatcggtccctctctccttccctctgacccctaccaacgtgccgttgccc 364
Query: 327 gcttctggggtgcctacattgacgacaagctc 358
||||||||| |||||||| ||||||||||||
Sbjct: 365 gcttctgggccgcctacatcgacgacaagctc 396
>gb|BQ765875.1|BQ765875 EBro03_SQ008_M07_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ008_M07 5', mRNA sequence
Length = 391
Score = 147 bits (74), Expect = 9e-034
Identities = 211/256 (82%), Gaps = 3/256 (1%)
Strand = Plus / Plus
Query: 22 aatggccggaggaggtgacgatgaactcaagctgctgggggcgtgggcgagcccattcgt 81
||||||||||||||| |||| || | ||||||||||| |||||||||||| |||||
Sbjct: 20 aatggccggaggaggaaacgacgaggtgaagctgctgggcatgtgggcgagcccgttcgt 79
Query: 82 cctgcgggtgaagctcgcgctcagcttcaagggcctgagctacgaggacgtggaggagga 141
||| || | ||||||||||||||| |||||||| | ||||||| ||||||| |||||
Sbjct: 80 ccttcgaatcaagctcgcgctcagcctcaagggcgtcgcctacgagtacgtggaagagga 139
Query: 142 cctctccggcggcaagagcgagctgctcctcgagtccaacccggtgcacaagaaggtgcc 201
|||| || |||||||||||||||||| ||||||||| |||| | ||||||||||
Sbjct: 140 cctcaagagc---aagagcgagctgctcctcaggtccaaccccgtgctccagaaggtgcc 196
Query: 202 cgtgctcctccacaacggcaagcctgtgtgcgagtcgcagatcatcgtgcagtacatcga 261
|||||| ||||| |||||||||| || | ||||||| | ||||| |||||||||| ||
Sbjct: 197 ggtgctcatccacgacggcaagcccgtctccgagtcgtcggtcatcctgcagtacattga 256
Query: 262 tgaggccttcgccggc 277
|||||||||||||||
Sbjct: 257 cgaggccttcgccggc 272
>gb|BF622191.2|BF622191 HVSMEa0001P16f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0001P16f, mRNA sequence
Length = 694
Score = 139 bits (70), Expect = 2e-031
Identities = 162/192 (84%), Gaps = 3/192 (1%)
Strand = Plus / Plus
Query: 87 gggtgaagctcgcgctcagcttcaagggcctgagctacgaggacgtggaggaggacctct 146
|||||||||| ||||| ||| ||||||||||||||| |||||| || |||||||||||
Sbjct: 117 gggtgaagcttgcgctgagcctcaagggcctgagcttcgaggatgtcgaggaggacctg- 175
Query: 147 ccggcggcaagagcgagctgctcctcgagtccaacccggtgcacaagaaggtgcccgtgc 206
||| |||||||||||| |||||| || ||||| ||||||||||||||||| ||||
Sbjct: 176 --ggcaacaagagcgagctcctcctcagctcgaacccagtgcacaagaaggtgccagtgc 233
Query: 207 tcctccacaacggcaagcctgtgtgcgagtcgcagatcatcgtgcagtacatcgatgagg 266
|| | ||||| || ||||| ||||||||||| ||||||| | ||||||||||||||||
Sbjct: 234 tcgttcacaatggaaagcccgtgtgcgagtcagtgatcatccttcagtacatcgatgagg 293
Query: 267 ccttcgccggca 278
| ||||||||||
Sbjct: 294 cgttcgccggca 305
>gb|BG299804.2|BG299804 HVSMEa0021O04f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0021O04f, mRNA sequence
Length = 813
Score = 139 bits (70), Expect = 2e-031
Identities = 162/192 (84%), Gaps = 3/192 (1%)
Strand = Plus / Plus
Query: 87 gggtgaagctcgcgctcagcttcaagggcctgagctacgaggacgtggaggaggacctct 146
|||||||||| ||||| ||| ||||||||||||||| |||||| || |||||||||||
Sbjct: 122 gggtgaagcttgcgctgagcctcaagggcctgagcttcgaggatgtcgaggaggacctg- 180
Query: 147 ccggcggcaagagcgagctgctcctcgagtccaacccggtgcacaagaaggtgcccgtgc 206
||| |||||||||||| |||||| || ||||| ||||||||||||||||| ||||
Sbjct: 181 --ggcaacaagagcgagctcctcctcagctcgaacccagtgcacaagaaggtgccagtgc 238
Query: 207 tcctccacaacggcaagcctgtgtgcgagtcgcagatcatcgtgcagtacatcgatgagg 266
|| | ||||| || ||||| ||||||||||| |||||| ||||||||||||||||||
Sbjct: 239 tcgttcacaatggaaagcccgtgtgcgagtcagggatcatgctgcagtacatcgatgagg 298
Query: 267 ccttcgccggca 278
| ||||||||||
Sbjct: 299 cgttcgccggca 310
>gb|BF623248.2|BF623248 HVSMEa0016A09f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0016A09f, mRNA sequence
Length = 818
Score = 123 bits (62), Expect = 1e-026
Identities = 160/192 (83%), Gaps = 3/192 (1%)
Strand = Plus / Plus
Query: 87 gggtgaagctcgcgctcagcttcaagggcctgagctacgaggacgtggaggaggacctct 146
|||||||||| ||||| ||| ||||||||||||||| |||||| | || |||||||||
Sbjct: 120 gggtgaagcttgcgctgagcctcaagggcctgagcttcgaggatgggggggaggacctg- 178
Query: 147 ccggcggcaagagcgagctgctcctcgagtccaacccggtgcacaagaaggtgcccgtgc 206
||| |||||||||||| |||||| || ||||| ||||||||||||||||| ||||
Sbjct: 179 --ggcaacaagagcgagctcctcctcagctcgaacccagtgcacaagaaggtgccagtgc 236
Query: 207 tcctccacaacggcaagcctgtgtgcgagtcgcagatcatcgtgcagtacatcgatgagg 266
|| | ||||| || ||||| ||||||||||| ||||||| | ||||||||| ||||||
Sbjct: 237 tcgttcacaatggaaagcccgtgtgcgagtcaatgatcatccttcagtacatcaatgagg 296
Query: 267 ccttcgccggca 278
| ||||||||||
Sbjct: 297 cgttcgccggca 308
>gb|BU989585.1|BU989585 HF22C07r HF Hordeum vulgare subsp. vulgare cDNA clone HF22C07
5-PRIME, mRNA sequence
Length = 599
Score = 121 bits (61), Expect = 5e-026
Identities = 120/139 (86%), Gaps = 3/139 (2%)
Strand = Plus / Plus
Query: 87 gggtgaagctcgcgctcagcttcaagggcctgagctacgaggacgtggaggaggacctct 146
||||||| |||||||| | |||||||||||||||||||| |||||||| ||||||||
Sbjct: 193 gggtgaaaatcgcgctccacctcaagggcctgagctacgagtacgtggagcaggacctc- 251
Query: 147 ccggcggcaagagcgagctgctcctcgagtccaacccggtgcacaagaaggtgcccgtgc 206
| | ||||||||| || |||||| ||||||||||||||||||||||||||||||||
Sbjct: 252 --gacaacaagagcgacctcctcctcatgtccaacccggtgcacaagaaggtgcccgtgc 309
Query: 207 tcctccacaacggcaagcc 225
|| ||||||| ||||||||
Sbjct: 310 tcatccacaatggcaagcc 328
>gb|BF066033.2|BF066033 HV_CEb0014K12f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0014K12f, mRNA sequence
Length = 966
Score = 117 bits (59), Expect = 8e-025
Identities = 152/183 (83%)
Strand = Plus / Plus
Query: 153 gcaagagcgagctgctcctcgagtccaacccggtgcacaagaaggtgcccgtgctcctcc 212
|||||||| ||| ||||||| ||||||||| |||||||||| |||||| |||||| |||
Sbjct: 151 gcaagagcccgctcctcctcgcgtccaaccccgtgcacaagagggtgccggtgctcatcc 210
Query: 213 acaacggcaagcctgtgtgcgagtcgcagatcatcgtgcagtacatcgatgaggccttcg 272
||||||||||||| || |||||| ||| |||||||||||||| |||| ||||| |||
Sbjct: 211 acaacggcaagcccgtccccgagtcacagctcatcgtgcagtacgtcgacgaggctttcc 270
Query: 273 ccggcactggcccgtcccttctccctgccgacccgcaccagcgcgccgtggctcgcttct 332
| | || |||| | | |||||| ||||||||||| |||||||||| ||||||||||
Sbjct: 271 cggccagctccccgcgcttcctcccttccgacccgcacgagcgcgccgtcgctcgcttct 330
Query: 333 ggg 335
|||
Sbjct: 331 ggg 333
>gb|BM442945.2|BM442945 EBro02_SQ001_P16_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ001_P16 5', mRNA sequence
Length = 288
Score = 117 bits (59), Expect = 8e-025
Identities = 148/177 (83%), Gaps = 3/177 (1%)
Strand = Plus / Plus
Query: 87 gggtgaagctcgcgctcagcttcaagggcctgagctacgaggacgtggaggaggacctct 146
|||||||||| ||||| ||| ||||||||||||||| |||||| || |||||||||||
Sbjct: 115 gggtgaagcttgcgctgagcctcaagggcctgagcttcgaggatgtcgaggaggacctg- 173
Query: 147 ccggcggcaagagcgagctgctcctcgagtccaacccggtgcacaagaaggtgcccgtgc 206
||| |||||||||||| |||||| || ||||| ||||||||||||||||| ||||
Sbjct: 174 --ggcaacaagagcgagctcctcctcagctcgaacccagtgcacaagaaggtgccagtgc 231
Query: 207 tcctccacaacggcaagcctgtgtgcgagtcgcagatcatcgtgcagtacatcgatg 263
|| | ||||| || ||||| ||||||||||| ||||||| | |||||||||||||
Sbjct: 232 tcgttcacaatggaaagcccgtgtgcgagtcagtgatcatccttcagtacatcgatg 288
>gb|BG299590.1|BG299590 HVSMEa0020O20f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0020O20f, mRNA sequence
Length = 666
Score = 115 bits (58), Expect = 3e-024
Identities = 133/158 (84%)
Strand = Plus / Plus
Query: 200 cccgtgctcctccacaacggcaagcctgtgtgcgagtcgcagatcatcgtgcagtacatc 259
||||||||| ||||||||||| || || |||||||| |||||||||||||||||||
Sbjct: 7 cccgtgctcatccacaacggctccccggtatgcgagtccatgatcatcgtgcagtacatc 66
Query: 260 gatgaggccttcgccggcactggcccgtcccttctccctgccgacccgcaccagcgcgcc 319
|| || | ||||||| |||| ||||||||||||||| | | ||||| || | ||||||
Sbjct: 67 gacgacgtcttcgccagcaccggcccgtcccttctctccgaggacccctacgaacgcgcc 126
Query: 320 gtggctcgcttctggggtgcctacattgacgacaagct 357
|||||||||||||||| |||||| |||||||||||||
Sbjct: 127 gtggctcgcttctgggtggcctacgttgacgacaagct 164
>gb|BF622945.3|BF622945 HVSMEa0012E03f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0012E03f, mRNA sequence
Length = 843
Score = 115 bits (58), Expect = 3e-024
Identities = 114/132 (86%), Gaps = 3/132 (2%)
Strand = Plus / Plus
Query: 89 gtgaagctcgcgctcagcttcaagggcctgagctacgaggacgtggaggaggacctctcc 148
||||||||||||||| ||| |||||||||||||||||||||||||||||| |||| |
Sbjct: 160 gtgaagctcgcgctcgccttgaagggcctgagctacgaggacgtggaggagaacctgt-- 217
Query: 149 ggcggcaagagcgagctgctcctcgagtccaacccggtgcacaagaaggtgcccgtgctc 208
|| ||||||||||||||||||| ||| ||||||||||| ||||||| | |||| ||||
Sbjct: 218 -gcaacaagagcgagctgctcctcaagtgcaacccggtgcgcaagaagatacccgggctc 276
Query: 209 ctccacaacggc 220
| |||||||||
Sbjct: 277 atacacaacggc 288
>gb|BF621473.2|BF621473 HVSMEa0011B16f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0011B16f, mRNA sequence
Length = 848
Score = 113 bits (57), Expect = 1e-023
Identities = 220/272 (80%), Gaps = 3/272 (1%)
Strand = Plus / Plus
Query: 64 gtgggcgagcccattcgtcctgcgggtgaagctcgcgctcagcttcaagggcctgagcta 123
|||||||||||| | ||||||||| ||| || ||||||||| |||||||| | | ||
Sbjct: 115 gtgggcgagcccgtacgtcctgcgagtgcgccttgcgctcagcatcaagggcatccgtta 174
Query: 124 cgaggacgtggaggaggacctctccggcggcaagagcgagctgctcctcgagtccaaccc 183
|||| ||| |||||||||||| |||| ||||||||||||||||||| ||| |||||
Sbjct: 175 cgagtacgcggaggaggacctt--cggca-caagagcgagctgctcctccggtcaaaccc 231
Query: 184 ggtgcacaagaaggtgcccgtgctcctccacaacggcaagcctgtgtgcgagtcgcagat 243
|| || || ||||| |||||||| ||||| ||||||||| || |||||||||| | |
Sbjct: 232 cgtccataacaaggtccccgtgctgatccacggcggcaagcccgtctgcgagtcgctggt 291
Query: 244 catcgtgcagtacatcgatgaggccttcgccggcactggcccgtcccttctccctgccga 303
|||| ||||||||||||| ||||| |||| ||| | ||||| |||| ||||| |||||
Sbjct: 292 catcctgcagtacatcgacgaggctttcggcggagcgggccccgccctcctcccggccga 351
Query: 304 cccgcaccagcgcgccgtggctcgcttctggg 335
|| ||| |||||||||| || || |||||||
Sbjct: 352 tccccacgagcgcgccgtcgcccggttctggg 383
>gb|BG299389.1|BG299389 HVSMEa0019L19f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0019L19f, mRNA sequence
Length = 624
Score = 105 bits (53), Expect = 3e-021
Identities = 80/89 (89%)
Strand = Plus / Plus
Query: 178 caacccggtgcacaagaaggtgcccgtgctcctccacaacggcaagcctgtgtgcgagtc 237
||||||||||||||||||||||||||||||| ||||||||||| ||| | ||||||||
Sbjct: 199 caacccggtgcacaagaaggtgcccgtgctcatccacaacggcgtgccgctctgcgagtc 258
Query: 238 gcagatcatcgtgcagtacatcgatgagg 266
|||| |||||||||||||| |||| ||||
Sbjct: 259 gcaggtcatcgtgcagtacgtcgacgagg 287
>gb|BF624504.3|BF624504 HVSMEa0016N24f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0016N24f, mRNA sequence
Length = 695
Score = 105 bits (53), Expect = 3e-021
Identities = 127/151 (84%), Gaps = 3/151 (1%)
Strand = Plus / Plus
Query: 87 gggtgaagctcgcgctcagcttcaagggcctgagctacgaggacgtggaggaggacctct 146
|||||||||| ||||| ||| ||||||||||||||| |||||| || |||||||||||
Sbjct: 122 gggtgaagcttgcgctgagcctcaagggcctgagcttcgaggatgtcgaggaggacctg- 180
Query: 147 ccggcggcaagagcgagctgctcctcgagtccaacccggtgcacaagaaggtgcccgtgc 206
||| |||||||||||| |||||| || ||||| ||||||||||||||||| ||||
Sbjct: 181 --ggcaacaagagcgagctcctcctcagctcgaacccagtgcacaagaaggtgccagtgc 238
Query: 207 tcctccacaacggcaagcctgtgtgcgagtc 237
|| | ||||| || ||||| |||||||||||
Sbjct: 239 tcgttcacaatggaaagcccgtgtgcgagtc 269
>gb|BF256380.2|BF256380 HVSMEf0009H03f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0009H03f, mRNA sequence
Length = 257
Score = 105 bits (53), Expect = 3e-021
Identities = 80/89 (89%)
Strand = Plus / Plus
Query: 178 caacccggtgcacaagaaggtgcccgtgctcctccacaacggcaagcctgtgtgcgagtc 237
||||||||||||||||||||||||||||||| ||||||||||| ||| | ||||||||
Sbjct: 164 caacccggtgcacaagaaggtgcccgtgctcatccacaacggcgtgccgctctgcgagtc 223
Query: 238 gcagatcatcgtgcagtacatcgatgagg 266
|||| |||||||||||||| |||| ||||
Sbjct: 224 gcaggtcatcgtgcagtacgtcgacgagg 252
>gb|BF259078.2|BF259078 HVSMEf0017J19f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0017J19f, mRNA sequence
Length = 834
Score = 105 bits (53), Expect = 3e-021
Identities = 80/89 (89%)
Strand = Plus / Plus
Query: 178 caacccggtgcacaagaaggtgcccgtgctcctccacaacggcaagcctgtgtgcgagtc 237
||||||||||||||||||||||||||||||| ||||||||||| ||| | ||||||||
Sbjct: 143 caacccggtgcacaagaaggtgcccgtgctcatccacaacggcgtgccgctctgcgagtc 202
Query: 238 gcagatcatcgtgcagtacatcgatgagg 266
|||| |||||||||||||| |||| ||||
Sbjct: 203 gcaggtcatcgtgcagtacgtcgacgagg 231
>gb|BG368894.1|BG368894 HVSMEi0021D06f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0021D06f, mRNA sequence
Length = 793
Score = 105 bits (53), Expect = 3e-021
Identities = 80/89 (89%)
Strand = Plus / Plus
Query: 178 caacccggtgcacaagaaggtgcccgtgctcctccacaacggcaagcctgtgtgcgagtc 237
||||||||||||||||||||||||||||||| ||||||||||| ||| | ||||||||
Sbjct: 160 caacccggtgcacaagaaggtgcccgtgctcatccacaacggcgtgccgctctgcgagtc 219
Query: 238 gcagatcatcgtgcagtacatcgatgagg 266
|||| |||||||||||||| |||| ||||
Sbjct: 220 gcaggtcatcgtgcagtacgtcgacgagg 248
>gb|BF065184.1|BF065184 HV_CEb0023O18f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0023O18f, mRNA sequence
Length = 577
Score = 105 bits (53), Expect = 3e-021
Identities = 219/272 (80%), Gaps = 3/272 (1%)
Strand = Plus / Plus
Query: 64 gtgggcgagcccattcgtcctgcgggtgaagctcgcgctcagcttcaagggcctgagcta 123
|||||||||||| | ||||||||| ||| || ||||||||| |||||||| | | ||
Sbjct: 126 gtgggcgagcccgtacgtcctgcgagtgcgccttgcgctcagcatcaagggcatccgtta 185
Query: 124 cgaggacgtggaggaggacctctccggcggcaagagcgagctgctcctcgagtccaaccc 183
|||| ||| |||||||||||| |||| ||||||||||||||||||| ||| |||||
Sbjct: 186 cgagtacgcggaggaggacctt--cggca-caagagcgagctgctcctccggtcaaaccc 242
Query: 184 ggtgcacaagaaggtgcccgtgctcctccacaacggcaagcctgtgtgcgagtcgcagat 243
|| || || ||||| |||||||| ||||| ||||||||| || |||||||||| | |
Sbjct: 243 cgtccataacaaggtccccgtgctgatccacggcggcaagcccgtctgcgagtcgctggt 302
Query: 244 catcgtgcagtacatcgatgaggccttcgccggcactggcccgtcccttctccctgccga 303
|||| |||| |||||||| ||||| |||| ||| | ||||| |||| ||||| |||||
Sbjct: 303 catcctgcaatacatcgacgaggctttcggcggagcgggccccgccctcctcccggccga 362
Query: 304 cccgcaccagcgcgccgtggctcgcttctggg 335
|| ||| |||||||||| || || |||||||
Sbjct: 363 tccccacgagcgcgccgtcgcccggttctggg 394
>gb|BE214207.2|BE214207 HV_CEb0002K18f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0002K18f, mRNA sequence
Length = 717
Score = 105 bits (53), Expect = 3e-021
Identities = 80/89 (89%)
Strand = Plus / Plus
Query: 178 caacccggtgcacaagaaggtgcccgtgctcctccacaacggcaagcctgtgtgcgagtc 237
||||||||||||||||||||||||||||||| ||||||||||| ||| | ||||||||
Sbjct: 152 caacccggtgcacaagaaggtgcccgtgctcatccacaacggcgtgccgctctgcgagtc 211
Query: 238 gcagatcatcgtgcagtacatcgatgagg 266
|||| |||||||||||||| |||| ||||
Sbjct: 212 gcaggtcatcgtgcagtacgtcgacgagg 240
>gb|BM375338.2|BM375338 EBem06_SQ003_A18_R embryo, 21 DPA, no treatment, cv Optic, EBem06
Hordeum vulgare subsp. vulgare cDNA clone
EBem06_SQ003_A18 5', mRNA sequence
Length = 480
Score = 105 bits (53), Expect = 3e-021
Identities = 80/89 (89%)
Strand = Plus / Plus
Query: 178 caacccggtgcacaagaaggtgcccgtgctcctccacaacggcaagcctgtgtgcgagtc 237
||||||||||||||||||||||||||||||| ||||||||||| ||| | ||||||||
Sbjct: 166 caacccggtgcacaagaaggtgcccgtgctcatccacaacggcgtgccgctctgcgagtc 225
Query: 238 gcagatcatcgtgcagtacatcgatgagg 266
|||| |||||||||||||| |||| ||||
Sbjct: 226 gcaggtcatcgtgcagtacgtcgacgagg 254
>gb|CA004877.1|CA004877 HS18P04r HS Hordeum vulgare subsp. vulgare cDNA clone HS18P04
5-PRIME, mRNA sequence
Length = 313
Score = 105 bits (53), Expect = 3e-021
Identities = 101/117 (86%)
Strand = Plus / Plus
Query: 151 cggcaagagcgagctgctcctcgagtccaacccggtgcacaagaaggtgcccgtgctcct 210
|||||||||| ||| ||||||| ||||||||| |||||||||| |||||| |||||| |
Sbjct: 144 cggcaagagcccgctcctcctcgcgtccaaccccgtgcacaagagggtgccggtgctcat 203
Query: 211 ccacaacggcaagcctgtgtgcgagtcgcagatcatcgtgcagtacatcgatgaggc 267
||||||||||||||| || |||||| ||| |||||||||||||| |||| |||||
Sbjct: 204 ccacaacggcaagcccgtccccgagtcacagctcatcgtgcagtacgtcgacgaggc 260
>gb|CA022668.1|CA022668 HZ44A05r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ44A05
5-PRIME, mRNA sequence
Length = 588
Score = 105 bits (53), Expect = 3e-021
Identities = 80/89 (89%)
Strand = Plus / Plus
Query: 178 caacccggtgcacaagaaggtgcccgtgctcctccacaacggcaagcctgtgtgcgagtc 237
||||||||||||||||||||||||||||||| ||||||||||| ||| | ||||||||
Sbjct: 171 caacccggtgcacaagaaggtgcccgtgctcatccacaacggcgtgccgctctgcgagtc 230
Query: 238 gcagatcatcgtgcagtacatcgatgagg 266
|||| |||||||||||||| |||| ||||
Sbjct: 231 gcaggtcatcgtgcagtacgtcgacgagg 259
>gb|BF623115.2|BF623115 HVSMEa0014H14f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0014H14f, mRNA sequence
Length = 857
Score = 103 bits (52), Expect = 1e-020
Identities = 153/184 (83%), Gaps = 2/184 (1%)
Strand = Plus / Plus
Query: 153 gcaagagcgagctgctcctcgagtccaacccggtgcacaagaaggtgcccgtgctcctcc 212
|||||||| ||| ||||||| ||||||||| |||||||||| |||||| |||||| |||
Sbjct: 115 gcaagagcccgctcctcctcgcgtccaaccccgtgcacaagagggtgccggtgctcatcc 174
Query: 213 acaacggcaagcctgtgtgcgagtcgcagatcatcgtgcagtacatcgatgaggccttcg 272
||||||||||||| || |||||| ||| |||||||||||||| |||| ||||| |||
Sbjct: 175 acaacggcaagcccgtccccgagtcacagctcatcgtgcagtacgtcgacgaggctttc- 233
Query: 273 ccggcactggcccgtcccttc-tccctgccgacccgcaccagcgcgccgtggctcgcttc 331
||||| ||| | |||| ||||| ||||||||||| ||||||||| |||||||||
Sbjct: 234 ccggccagctccccacgcttcctcccttccgacccgcacaagcgcgccgacgctcgcttc 293
Query: 332 tggg 335
||||
Sbjct: 294 tggg 297
>gb|BF627874.2|BF627874 HVSMEb0006C01f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0006C01f, mRNA sequence
Length = 783
Score = 103 bits (52), Expect = 1e-020
Identities = 76/84 (90%)
Strand = Plus / Plus
Query: 178 caacccggtgcacaagaaggtgcccgtgctcctccacaacggcaagcctgtgtgcgagtc 237
||||||||||||||||||||||||||||||| ||||||||||| ||| | ||||||||
Sbjct: 142 caacccggtgcacaagaaggtgcccgtgctcatccacaacggcgtgccgctctgcgagtc 201
Query: 238 gcagatcatcgtgcagtacatcga 261
|||| |||||||||||||| ||||
Sbjct: 202 gcaggtcatcgtgcagtacgtcga 225
>gb|BF625851.2|BF625851 HVSMEa0013N14f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0013N14f, mRNA sequence
Length = 521
Score = 101 bits (51), Expect = 5e-020
Identities = 159/193 (82%), Gaps = 4/193 (2%)
Strand = Plus / Plus
Query: 87 gggtgaagctcgcgctcagcttcaagggcctgagctacgaggacgtggaggaggacctct 146
|||||||||| ||||| ||| ||||||||||||||| |||||| || |||||||||||
Sbjct: 113 gggtgaagcttgcgctgagcctcaagggcctgagcttcgaggatgtcgaggaggacct-- 170
Query: 147 ccggcggcaagagcgagctgctcctcgagtccaacccggtgcacaagaaggtgcccgtgc 206
||| |||||||||||| ||||| | || ||| | ||||||||||||||||| ||||
Sbjct: 171 -gggcaacaagagcgagctcctccttaactcgaacgcagtgcacaagaaggtgccagtgc 229
Query: 207 tcctccacaacggcaagcctgtgtgcgagtcgcagatcat-cgtgcagtacatcgatgag 265
|| | ||||| || ||||| |||||||||| |||||| | | || ||||||||||||
Sbjct: 230 tcgttcacaaaggaaagcccgtgtgcgagttagtgatcatcctttcaatacatcgatgag 289
Query: 266 gccttcgccggca 278
|| ||||||||||
Sbjct: 290 gcgttcgccggca 302
>gb|BG415059.1|BG415059 HVSMEk0004P20f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0004P20f, mRNA sequence
Length = 627
Score = 93.7 bits (47), Expect = 1e-017
Identities = 130/158 (82%)
Strand = Plus / Plus
Query: 200 cccgtgctcctccacaacggcaagcctgtgtgcgagtcgcagatcatcgtgcagtacatc 259
||||||||| ||||||||||| || || |||||||| ||||||||||||||||||
Sbjct: 7 cccgtgctcatccacaacggctccccggtatgcgagtccatgatcatcgtgcagtacatg 66
Query: 260 gatgaggccttcgccggcactggcccgtcccttctccctgccgacccgcaccagcgcgcc 319
|| || ||||||| |||| ||||||||||||||| | | ||||| || | ||||||
Sbjct: 67 gaggacntcttcgccagcaccggcccgtcccttctctccgaggacccctacgaacgcgcc 126
Query: 320 gtggctcgcttctggggtgcctacattgacgacaagct 357
|||||||||||||||| |||||| ||||| |||||||
Sbjct: 127 gtggctcgcttctgggtggcctacgttgacaacaagct 164
>gb|BF255920.2|BF255920 HVSMEf0008D10f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0008D10f, mRNA sequence
Length = 447
Score = 93.7 bits (47), Expect = 1e-017
Identities = 71/79 (89%)
Strand = Plus / Plus
Query: 178 caacccggtgcacaagaaggtgcccgtgctcctccacaacggcaagcctgtgtgcgagtc 237
||||||||||||||| ||||||||||||||| ||||||||||| ||| | ||||||||
Sbjct: 153 caacccggtgcacaaaaaggtgcccgtgctcatccacaacggcgtgccgctctgcgagtc 212
Query: 238 gcagatcatcgtgcagtac 256
|||| ||||||||||||||
Sbjct: 213 gcaggtcatcgtgcagtac 231
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 153,782
Number of Sequences: 312970
Number of extensions: 153782
Number of successful extensions: 45550
Number of sequences better than 0.5: 332
Number of HSP's better than 0.5 without gapping: 332
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 44673
Number of HSP's gapped (non-prelim): 817
length of query: 1069
length of database: 175,134,539
effective HSP length: 19
effective length of query: 1050
effective length of database: 169,188,109
effective search space: 177647514450
effective search space used: 177647514450
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)