BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3829479.2.1
(1245 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BU995356.1|BU995356 HM09P23r HM Hordeum vulgare subsp. v... 502 e-140
gb|AF486648.1| Hordeum vulgare subsp. vulgare AGAMOUS-like ... 498 e-139
gb|AL506475.1|AL506475 AL506475 Hordeum vulgare Barke devel... 444 e-123
gb|BU995744.1|BU995744 HM11D17r HM Hordeum vulgare subsp. v... 444 e-123
gb|BU995877.1|BU995877 HM11K13r HM Hordeum vulgare subsp. v... 444 e-123
gb|BU998535.1|BU998535 HI11F23r HI Hordeum vulgare subsp. v... 442 e-122
gb|AL506480.1|AL506480 AL506480 Hordeum vulgare Barke devel... 325 2e-087
gb|AL506894.1|AL506894 AL506894 Hordeum vulgare Barke devel... 325 2e-087
gb|AL507763.1|AL507763 AL507763 Hordeum vulgare Barke devel... 325 2e-087
gb|AL508019.1|AL508019 AL508019 Hordeum vulgare Barke devel... 325 2e-087
gb|AL509053.1|AL509053 AL509053 Hordeum vulgare Barke devel... 325 2e-087
gb|BE454695.2|BE454695 HVSMEh0095C18f Hordeum vulgare 5-45 ... 325 2e-087
gb|BG367358.1|BG367358 HVSMEi0011P20f Hordeum vulgare 20 DA... 325 2e-087
gb|BE454527.3|BE454527 HVSMEh0094C05f Hordeum vulgare 5-45 ... 325 2e-087
gb|BG414586.2|BG414586 HVSMEk0002P16f Hordeum vulgare testa... 325 2e-087
gb|BQ462735.1|BQ462735 HI01N16T HI Hordeum vulgare subsp. v... 325 2e-087
gb|BQ764786.1|BQ764786 EBca01_SQ004_L21_R carpel, pre-anthe... 325 2e-087
gb|BU969355.1|BU969355 HB11E16r BC Hordeum vulgare subsp. v... 325 2e-087
gb|BU973813.1|BU973813 HB26A20r BC Hordeum vulgare subsp. v... 325 2e-087
gb|BU996265.1|BU996265 HM13B01r HM Hordeum vulgare subsp. v... 325 2e-087
gb|CA024629.1|CA024629 HZ49N15r HZ Hordeum vulgare subsp. v... 325 2e-087
gb|CA025405.1|CA025405 HZ52B05r HZ Hordeum vulgare subsp. v... 325 2e-087
gb|CA025534.1|CA025534 HZ52G24r HZ Hordeum vulgare subsp. v... 325 2e-087
gb|CA025584.1|CA025584 HZ52J05r HZ Hordeum vulgare subsp. v... 325 2e-087
gb|CA028005.1|CA028005 HZ60L09r HZ Hordeum vulgare subsp. v... 325 2e-087
gb|CA028663.1|CA028663 HZ62N08r HZ Hordeum vulgare subsp. v... 325 2e-087
gb|BG344090.1|BG344090 HVSMEg0007K02f Hordeum vulgare pre-a... 317 5e-085
gb|AF486649.1| Hordeum vulgare subsp. vulgare AGAMOUS-like ... 317 5e-085
gb|BU975486.1|BU975486 HB31F02r BC Hordeum vulgare subsp. v... 295 2e-078
gb|BI948755.1|BI948755 HVSMEl0010L12f Hordeum vulgare spike... 293 7e-078
gb|CA029142.1|CA029142 HZ64F07r HZ Hordeum vulgare subsp. v... 287 4e-076
gb|BG417142.1|BG417142 HVSMEk0016H10f Hordeum vulgare testa... 281 3e-074
gb|BM442374.2|BM442374 EBan01_SQ003_A06_R anther, yellow st... 281 3e-074
gb|BI948062.1|BI948062 HVSMEl0008A23f Hordeum vulgare spike... 262 2e-068
gb|BM097203.2|BM097203 EBpi07_SQ002_L16_R pistil, 12 DPA, n... 262 2e-068
gb|CA026169.1|CA026169 HZ55C06r HZ Hordeum vulgare subsp. v... 260 1e-067
gb|BU979781.1|BU979781 HA17E15r HA Hordeum vulgare subsp. v... 202 2e-050
gb|BG414778.2|BG414778 HVSMEk0003L01f Hordeum vulgare testa... 194 5e-048
gb|BE193581.2|BE193581 HVSMEh0081M10f Hordeum vulgare 5-45 ... 192 2e-047
gb|BQ458971.1|BQ458971 HA02K21r HA Hordeum vulgare subsp. v... 192 2e-047
gb|BU979019.1|BU979019 HA14O21r HA Hordeum vulgare subsp. v... 192 2e-047
gb|BU979487.1|BU979487 HA16F04r HA Hordeum vulgare subsp. v... 192 2e-047
gb|CA025113.1|CA025113 HZ51D24r HZ Hordeum vulgare subsp. v... 192 2e-047
gb|CA021258.1|CA021258 HZ39J06r HZ Hordeum vulgare subsp. v... 184 5e-045
gb|BQ470743.1|BQ470743 HX03O10r HX Hordeum vulgare subsp. v... 168 3e-040
gb|CK124663.1|CK124663 BES1824109o14 BES1824 Hordeum vulgar... 168 3e-040
gb|AY541067.1| Hordeum vulgare subsp. vulgare AGAMOUS LIKE6... 168 3e-040
gb|BU982429.1|BU982429 HA26I11r HA Hordeum vulgare subsp. v... 167 1e-039
gb|BE456120.2|BE456120 HVSMEg0019N18f Hordeum vulgare pre-a... 165 4e-039
gb|BU984647.1|BU984647 HF04I23r HF Hordeum vulgare subsp. v... 165 4e-039
gb|CA023514.1|CA023514 HZ46H17r HZ Hordeum vulgare subsp. v... 165 4e-039
gb|CA023749.1|CA023749 HZ47E18r HZ Hordeum vulgare subsp. v... 165 4e-039
emb|AJ249145.1|HVU249145 Hordeum vulgare mRNA for MADS-box ... 165 4e-039
gb|BE195464.3|BE195464 HVSMEh0089L24f Hordeum vulgare 5-45 ... 159 3e-037
gb|BG415259.2|BG415259 HVSMEk0005M04f Hordeum vulgare testa... 159 3e-037
gb|BG418830.2|BG418830 HVSMEk0024K11f Hordeum vulgare testa... 147 1e-033
gb|BU978508.1|BU978508 HA13H01r HA Hordeum vulgare subsp. v... 145 4e-033
gb|BU979387.1|BU979387 HA15P22r HA Hordeum vulgare subsp. v... 145 4e-033
gb|BU997161.1|BU997161 HI07B21r HI Hordeum vulgare subsp. v... 145 4e-033
gb|CA022702.1|CA022702 HZ44B21r HZ Hordeum vulgare subsp. v... 145 4e-033
gb|CA023382.1|CA023382 HZ46B02r HZ Hordeum vulgare subsp. v... 145 4e-033
gb|CA024068.1|CA024068 HZ48E09r HZ Hordeum vulgare subsp. v... 145 4e-033
gb|CA024560.1|CA024560 HZ49K11r HZ Hordeum vulgare subsp. v... 145 4e-033
gb|CA027865.1|CA027865 HZ60E08r HZ Hordeum vulgare subsp. v... 145 4e-033
gb|BU981579.1|BU981579 HA24A15r HA Hordeum vulgare subsp. v... 139 2e-031
gb|BG414969.2|BG414969 HVSMEk0004I01f Hordeum vulgare testa... 137 1e-030
gb|BM373901.1|BM373901 EBma03_SQ003_B04_R maternal, 8 DPA, ... 137 1e-030
gb|BG417111.1|BG417111 HVSMEk0016F04f Hordeum vulgare testa... 135 4e-030
gb|CA031703.1|CA031703 HX10O06r HX Hordeum vulgare subsp. v... 135 4e-030
gb|BE193714.2|BE193714 HVSMEh0082E10f Hordeum vulgare 5-45 ... 131 6e-029
gb|BE195618.2|BE195618 HVSMEh0089O24f Hordeum vulgare 5-45 ... 131 6e-029
gb|BI957577.1|BI957577 HVSMEn0010D09f Hordeum vulgare rachi... 131 6e-029
gb|AV932969.1|AV932969 AV932969 K. Sato unpublished cDNA li... 131 6e-029
gb|BI776503.2|BI776503 EBpi05_SQ001_K07_R pistil, 8 DPA, no... 131 6e-029
gb|BJ547238.1|BJ547238 BJ547238 K. Sato unpublished cDNA li... 131 6e-029
gb|BJ547546.1|BJ547546 BJ547546 K. Sato unpublished cDNA li... 131 6e-029
gb|AV922660.2|AV922660 AV922660 K. Sato unpublished cDNA li... 131 6e-029
emb|AJ249143.1|HVU249143 Hordeum vulgare mRNA for MADS-box ... 131 6e-029
gb|AL508733.1|AL508733 AL508733 Hordeum vulgare Barke devel... 129 2e-028
gb|BF266152.2|BF266152 HV_CEa0014F03f Hordeum vulgare seedl... 129 2e-028
gb|BG418810.1|BG418810 HVSMEk0024I17f Hordeum vulgare testa... 129 2e-028
gb|BE194007.3|BE194007 HVSMEh0083F13f Hordeum vulgare 5-45 ... 129 2e-028
gb|BM096825.2|BM096825 EBma07_SQ001_M14_R maternal, 21 DPA,... 129 2e-028
gb|BM097091.2|BM097091 EBpi07_SQ002_F23_R pistil, 12 DPA, n... 129 2e-028
gb|BU975559.1|BU975559 HB31I14r BC Hordeum vulgare subsp. v... 129 2e-028
gb|BU981382.1|BU981382 HA23H05r HA Hordeum vulgare subsp. v... 129 2e-028
gb|BU994511.1|BU994511 HM07E21r HM Hordeum vulgare subsp. v... 129 2e-028
gb|BU996042.1|BU996042 HM12D17r HM Hordeum vulgare subsp. v... 129 2e-028
gb|BU997970.1|BU997970 HI09J04r HI Hordeum vulgare subsp. v... 129 2e-028
gb|BU999207.1|BU999207 HI13L03r HI Hordeum vulgare subsp. v... 129 2e-028
gb|CA021239.1|CA021239 HZ39I09r HZ Hordeum vulgare subsp. v... 129 2e-028
gb|CA022102.1|CA022102 HZ42C18r HZ Hordeum vulgare subsp. v... 129 2e-028
gb|CA022365.1|CA022365 HZ42O13r HZ Hordeum vulgare subsp. v... 129 2e-028
gb|CA024361.1|CA024361 HZ49B13r HZ Hordeum vulgare subsp. v... 129 2e-028
gb|CA025884.1|CA025884 HZ53G19r HZ Hordeum vulgare subsp. v... 129 2e-028
gb|BJ547237.1|BJ547237 BJ547237 K. Sato unpublished cDNA li... 129 2e-028
gb|CK123208.1|CK123208 BES1824102i20 BES1824 Hordeum vulgar... 129 2e-028
gb|AY541068.1| Hordeum vulgare subsp. vulgare AGAMOUS LIKE9... 129 2e-028
emb|AJ249147.1|HVU249147 Hordeum vulgare mRNA for MADS-box ... 129 2e-028
gb|BQ758398.1|BQ758398 EBma05_SQ001_L12_R maternal, 12 DPA,... 125 4e-027
gb|CA026363.1|CA026363 HZ55L07r HZ Hordeum vulgare subsp. v... 125 4e-027
gb|BU995060.1|BU995060 HM09B05r HM Hordeum vulgare subsp. v... 123 1e-026
gb|CA024291.1|CA024291 HZ48O08r HZ Hordeum vulgare subsp. v... 123 1e-026
gb|BG414398.1|BG414398 HVSMEk0002B05f Hordeum vulgare testa... 121 6e-026
gb|CA027204.1|CA027204 HZ58D04r HZ Hordeum vulgare subsp. v... 121 6e-026
gb|BI776993.2|BI776993 EBpi03_SQ001_J15_R pistil, 4 DPA, no... 119 2e-025
gb|CA026975.1|CA026975 HZ57I06r HZ Hordeum vulgare subsp. v... 119 2e-025
gb|BM442073.2|BM442073 EBan01_SQ002_B20_R anther, yellow st... 115 4e-024
gb|BG344343.1|BG344343 HVSMEg0008P19f Hordeum vulgare pre-a... 113 1e-023
gb|BF627446.2|BF627446 HVSMEb0004O03f Hordeum vulgare seedl... 105 3e-021
gb|BG367455.1|BG367455 HVSMEi0012F04f Hordeum vulgare 20 DA... 105 3e-021
gb|BU979939.1|BU979939 HA17O10r HA Hordeum vulgare subsp. v... 105 3e-021
gb|CA021814.1|CA021814 HZ41D07r HZ Hordeum vulgare subsp. v... 105 3e-021
gb|CB881898.1|CB881898 HM11D17w HM Hordeum vulgare subsp. v... 103 1e-020
gb|CB882030.1|CB882030 HM11K13w HM Hordeum vulgare subsp. v... 103 1e-020
gb|BQ764751.1|BQ764751 EBca01_SQ004_E21_R carpel, pre-anthe... 101 5e-020
gb|BU979626.1|BU979626 HA16M02r HA Hordeum vulgare subsp. v... 101 5e-020
gb|BU981513.1|BU981513 HA23N18r HA Hordeum vulgare subsp. v... 101 5e-020
gb|BU994487.1|BU994487 HM07D20r HM Hordeum vulgare subsp. v... 100 2e-019
gb|CB880425.1|CB880425 HM06I02w HM Hordeum vulgare subsp. v... 100 2e-019
gb|CB881499.1|CB881499 HM09P23w HM Hordeum vulgare subsp. v... 100 2e-019
gb|BF624256.3|BF624256 HVSMEa0013C13f Hordeum vulgare seedl... 96 3e-018
gb|BI958544.1|BI958544 HVSMEn0015I07f Hordeum vulgare rachi... 96 3e-018
gb|BE231150.2|BE231150 HVSMEg0017C04f Hordeum vulgare pre-a... 96 3e-018
gb|BG343946.2|BG343946 HVSMEg0007D05f Hordeum vulgare pre-a... 96 3e-018
gb|BG418254.2|BG418254 HVSMEk0022B16f Hordeum vulgare testa... 96 3e-018
gb|BM374839.1|BM374839 EBma05_SQ003_C14_R maternal, 12 DPA,... 96 3e-018
gb|AV932867.1|AV932867 AV932867 K. Sato unpublished cDNA li... 96 3e-018
gb|AV933011.1|AV933011 AV933011 K. Sato unpublished cDNA li... 96 3e-018
gb|AV934186.1|AV934186 AV934186 K. Sato unpublished cDNA li... 96 3e-018
gb|BQ462520.1|BQ462520 HI01C12T HI Hordeum vulgare subsp. v... 96 3e-018
gb|BQ463844.1|BQ463844 HG01J20r HG Hordeum vulgare subsp. v... 96 3e-018
gb|BM376225.2|BM376225 EBma01_SQ002_L14_R maternal, 4 DPA, ... 96 3e-018
gb|BU994410.1|BU994410 HM06P17r HM Hordeum vulgare subsp. v... 96 3e-018
gb|BU997618.1|BU997618 HI08I05r HI Hordeum vulgare subsp. v... 96 3e-018
gb|BU999147.1|BU999147 HI13G17r HI Hordeum vulgare subsp. v... 96 3e-018
gb|BU999601.1|BU999601 HI15A03r HI Hordeum vulgare subsp. v... 96 3e-018
gb|CA021403.1|CA021403 HZ39P24r HZ Hordeum vulgare subsp. v... 96 3e-018
gb|CA023726.1|CA023726 HZ47D14r HZ Hordeum vulgare subsp. v... 96 3e-018
gb|CA025109.1|CA025109 HZ51D19r HZ Hordeum vulgare subsp. v... 96 3e-018
gb|CA025481.1|CA025481 HZ52E16r HZ Hordeum vulgare subsp. v... 96 3e-018
gb|CA032046.1|CA032046 HX11N16r HX Hordeum vulgare subsp. v... 96 3e-018
gb|BJ547239.1|BJ547239 BJ547239 K. Sato unpublished cDNA li... 96 3e-018
gb|BJ547327.1|BJ547327 BJ547327 K. Sato unpublished cDNA li... 96 3e-018
gb|BJ547335.1|BJ547335 BJ547335 K. Sato unpublished cDNA li... 96 3e-018
gb|BJ547364.1|BJ547364 BJ547364 K. Sato unpublished cDNA li... 96 3e-018
gb|BJ547385.1|BJ547385 BJ547385 K. Sato unpublished cDNA li... 96 3e-018
gb|BJ547578.1|BJ547578 BJ547578 K. Sato unpublished cDNA li... 96 3e-018
gb|BJ547620.1|BJ547620 BJ547620 K. Sato unpublished cDNA li... 96 3e-018
gb|BJ547783.1|BJ547783 BJ547783 K. Sato unpublished cDNA li... 96 3e-018
gb|BJ547898.1|BJ547898 BJ547898 K. Sato unpublished cDNA li... 96 3e-018
gb|AY758233.1| Hordeum vulgare subsp. vulgare cultivar More... 96 3e-018
gb|AY758235.1| Hordeum vulgare subsp. vulgare cultivar Igri... 96 3e-018
gb|AY758236.1| Hordeum vulgare subsp. vulgare cultivar Triu... 96 3e-018
gb|AY750995.1| Hordeum vulgare subsp. vulgare cultivar More... 96 3e-018
gb|AY785825.1| Hordeum vulgare subsp. vulgare cultivar More... 96 3e-018
gb|AY785826.1| Hordeum vulgare subsp. vulgare cultivar More... 96 3e-018
gb|AY785827.1| Hordeum vulgare subsp. vulgare cultivar 88Ab... 96 3e-018
gb|AY785828.1| Hordeum vulgare subsp. vulgare cultivar Dick... 96 3e-018
gb|AY785829.1| Hordeum vulgare subsp. vulgare cultivar Harr... 96 3e-018
gb|AY785830.1| Hordeum vulgare subsp. vulgare cultivar Stri... 96 3e-018
gb|AY785831.1| Hordeum vulgare subsp. vulgare cultivar Trem... 96 3e-018
gb|AY785833.1| Hordeum vulgare subsp. vulgare cultivar Igri... 96 3e-018
gb|AY785834.1| Hordeum vulgare subsp. vulgare cultivar Nure... 96 3e-018
gb|AY785835.1| Hordeum vulgare subsp. vulgare cultivar Komp... 96 3e-018
gb|AY866486.1| Hordeum vulgare subsp. vulgare cultivar Triu... 96 3e-018
gb|BI956235.1|BI956235 HVSMEn0001F21f Hordeum vulgare rachi... 94 1e-017
emb|AJ249146.1|HVU249146 Hordeum vulgare mRNA for MADS-box ... 94 1e-017
gb|CV056304.1|CV056304 BNEL16C1 Barley EST endosperm librar... 92 5e-017
gb|BI960528.1|BI960528 HVSMEn0024O19f Hordeum vulgare rachi... 90 2e-016
gb|BF622888.3|BF622888 HVSMEa0009O05f Hordeum vulgare seedl... 88 8e-016
gb|BG301340.1|BG301340 HVSMEb0020P03f Hordeum vulgare seedl... 88 8e-016
emb|AJ249144.1|HVU249144 Hordeum vulgare mRNA for MADS-box ... 88 8e-016
gb|BI957545.1|BI957545 HVSMEn0010B09f Hordeum vulgare rachi... 86 3e-015
gb|BI958127.1|BI958127 HVSMEn0013H24f Hordeum vulgare rachi... 86 3e-015
gb|BF629182.3|BF629182 HVSMEb0010D12f Hordeum vulgare seedl... 86 3e-015
gb|BE194950.3|BE194950 HVSMEh0087M04f Hordeum vulgare 5-45 ... 86 3e-015
gb|BF264447.3|BF264447 HV_CEa0009H05f Hordeum vulgare seedl... 86 3e-015
gb|BQ459169.1|BQ459169 HA02B21r HA Hordeum vulgare subsp. v... 86 3e-015
gb|BQ469990.1|BQ469990 HX01H06T HX Hordeum vulgare subsp. v... 86 3e-015
gb|BM442365.2|BM442365 EBan01_SQ002_P21_R anther, yellow st... 86 3e-015
gb|BU973061.1|BU973061 HB23K04r BC Hordeum vulgare subsp. v... 86 3e-015
gb|CA009054.1|CA009054 HU13A17r HU Hordeum vulgare subsp. v... 86 3e-015
gb|CA009157.1|CA009157 HU13F11r HU Hordeum vulgare subsp. v... 86 3e-015
gb|CB880017.1|CB880017 HM05D20w HM Hordeum vulgare subsp. v... 86 3e-015
gb|BI948719.1|BI948719 HVSMEl0010J18f Hordeum vulgare spike... 84 1e-014
gb|BG365393.2|BG365393 HVSMEi0002I08f Hordeum vulgare 20 DA... 84 1e-014
gb|BQ660301.1|BQ660301 HI01N16w HI Hordeum vulgare subsp. v... 84 1e-014
gb|BU996011.1|BU996011 HM12B18r HM Hordeum vulgare subsp. v... 84 1e-014
gb|BF627401.2|BF627401 HVSMEb0004M05f Hordeum vulgare seedl... 78 8e-013
gb|BE194699.3|BE194699 HVSMEh0086I20f Hordeum vulgare 5-45 ... 78 8e-013
gb|BE196209.3|BE196209 HVSMEh0091K15f Hordeum vulgare 5-45 ... 78 8e-013
gb|BU996044.1|BU996044 HM12D19r HM Hordeum vulgare subsp. v... 76 3e-012
gb|BG310152.1|BG310152 HVSMEc0016P20f Hordeum vulgare seedl... 74 1e-011
gb|BE455888.2|BE455888 HVSMEg0017B20f Hordeum vulgare pre-a... 74 1e-011
gb|BQ462617.1|BQ462617 HI01H19T HI Hordeum vulgare subsp. v... 74 1e-011
gb|BU998520.1|BU998520 HI11F04r HI Hordeum vulgare subsp. v... 74 1e-011
gb|CA022292.1|CA022292 HZ42L06r HZ Hordeum vulgare subsp. v... 74 1e-011
gb|CA025681.1|CA025681 HZ52N13r HZ Hordeum vulgare subsp. v... 74 1e-011
gb|CA032371.1|CA032371 HX12N03r HX Hordeum vulgare subsp. v... 74 1e-011
gb|CK125530.1|CK125530 BES1824108p02 BES1824 Hordeum vulgar... 74 1e-011
gb|AY541066.1| Hordeum vulgare subsp. vulgare PISTILLATA-li... 74 1e-011
gb|BU967322.1|BU967322 HB03O23r BC Hordeum vulgare subsp. v... 72 5e-011
gb|BJ543924.1|BJ543924 BJ543924 K. Sato unpublished cDNA li... 72 5e-011
gb|BJ452447.1|BJ452447 BJ452447 K. Sato unpublished cDNA li... 70 2e-010
emb|AJ249141.1|HVU249141 Hordeum vulgare mRNA for MADS-box ... 68 8e-010
emb|AJ249142.1|HVU249142 Hordeum vulgare mRNA for MADS-box ... 68 8e-010
gb|BG365779.1|BG365779 HVSMEi0004C18f Hordeum vulgare 20 DA... 66 3e-009
gb|BQ464802.1|BQ464802 HU01I23T HU Hordeum vulgare subsp. v... 66 3e-009
gb|BG343071.2|BG343071 HVSMEg0001P05f Hordeum vulgare pre-a... 52 4e-005
gb|BU971194.1|BU971194 HB16O07r BC Hordeum vulgare subsp. v... 52 4e-005
gb|BU971499.1|BU971499 HB17M21r BC Hordeum vulgare subsp. v... 52 4e-005
gb|CV060720.1|CV060720 BNEL60d5 Barley EST endosperm librar... 50 2e-004
gb|BQ462769.1|BQ462769 HI01P04T HI Hordeum vulgare subsp. v... 48 7e-004
gb|BI776462.2|BI776462 EBpi05_SQ001_H07_R pistil, 8 DPA, no... 48 7e-004
gb|BU967729.1|BU967729 HB05D14r BC Hordeum vulgare subsp. v... 48 7e-004
gb|BU968939.1|BU968939 HB10A19r BC Hordeum vulgare subsp. v... 48 7e-004
gb|BU975017.1|BU975017 HB29N11r BC Hordeum vulgare subsp. v... 48 7e-004
gb|BU975058.1|BU975058 HB29P11r BC Hordeum vulgare subsp. v... 48 7e-004
gb|CV054127.1|CV054127 BNEL107a5 Barley EST endosperm libra... 48 7e-004
gb|CV058687.1|CV058687 BNEL3G11 Barley EST endosperm librar... 48 7e-004
gb|BQ753907.1|BQ753907 EBca01_SQ002_D17_R carpel, pre-anthe... 46 0.003
gb|BU981281.1|BU981281 HA23C12r HA Hordeum vulgare subsp. v... 46 0.003
gb|BU994760.1|BU994760 HM08C02r HM Hordeum vulgare subsp. v... 46 0.003
gb|BJ547458.1|BJ547458 BJ547458 K. Sato unpublished cDNA li... 46 0.003
gb|CK122890.1|CK122890 BES1824101b13 BES1824 Hordeum vulgar... 46 0.003
gb|AY541065.1| Hordeum vulgare subsp. vulgare APETALA3-like... 46 0.003
gb|BF629592.2|BF629592 HVSMEb0013H07f Hordeum vulgare seedl... 44 0.011
gb|BI957426.1|BI957426 HVSMEn0009H14f Hordeum vulgare rachi... 42 0.043
gb|BG415626.2|BG415626 HVSMEk0007D15f Hordeum vulgare testa... 42 0.043
gb|CV057167.1|CV057167 BNEL24g3 Barley EST endosperm librar... 42 0.043
gb|BF625950.2|BF625950 HVSMEa0014L17f Hordeum vulgare seedl... 40 0.17
gb|CV060514.1|CV060514 BNEL59a11 Barley EST endosperm libra... 40 0.17
>gb|BU995356.1|BU995356 HM09P23r HM Hordeum vulgare subsp. vulgare cDNA clone HM09P23
5-PRIME, mRNA sequence
Length = 628
Score = 502 bits (253), Expect = e-140
Identities = 412/465 (88%)
Strand = Plus / Minus
Query: 523 tccatctcccttttttgcatatagtcaacttcagcgtatagcagctcattctttctagct 582
||||| ||||| || |||||||| ||||||||||| || | |||||||||||||||||||
Sbjct: 623 tccatttccctcttctgcatatactcaacttcagcatacatcagctcattctttctagct 564
Query: 583 ctaatcttgattatggctttctccagcttgccctccatttgtttaagatccctgaggccc 642
|| |||||| |||| ||||||||||| |||| || | || ||||||||||| ||| |
Sbjct: 563 cttatcttggctatgcctttctccagcctgccttcaagctgcttaagatccctcagggtc 504
Query: 643 atggtgtggatggaatctcccactatgttcctagtgtttgcgttttgcaagctgtggatc 702
|||||| || ||||||| ||| | |||| |||||| |||||||||||| ||||
Sbjct: 503 atggtgctgacagaatctctcaccagtgacctactgtttgagttttgcaagctactgatc 444
Query: 703 atctgtcgcagcttggaggactcctgctggtagtactgggcattgacttctgcaactgtg 762
||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 443 tgctggcgcagcttggaggactcctgctggtagtactgggcattgacttctgcaaccgtg 384
Query: 763 ccagagttggaggagtcactgttggccttcttgtacctctcaatggtggacttcacactg 822
||||||||||| | ||||||||||||||| ||||||||||||||||||| |||||||||
Sbjct: 383 ccagagttggatgtgtcactgttggcctttttgtacctctcaatggtggctttcacactg 324
Query: 823 ttgttggcgtactcgtagaggcggccgcggctggagaagacgacgagcgcgacctcggcg 882
||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 323 ttgtttgagtactcgtagaggcggccgcggctggagaagacgacgagggcgacctcggcg 264
Query: 883 tcgcagagcaccgagagctcgtacgccttcttgagcaggccgttgcggcgcttgcagaag 942
|| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 263 tcacagagcaccgagagctcgtacgccttcttgaggaggccgttgcggcgcttgcagaag 204
Query: 943 gtcacctgccggctcgtcgtgttctcgatgcgcttgatctcgatc 987
|| ||||||||| | || |||||||||||||||||||||||||||
Sbjct: 203 gtgacctgccggttggtggtgttctcgatgcgcttgatctcgatc 159
>gb|AF486648.1| Hordeum vulgare subsp. vulgare AGAMOUS-like protein 1 HvAG1 (AG1)
mRNA, complete cds
Length = 1163
Score = 498 bits (251), Expect = e-139
Identities = 437/499 (87%)
Strand = Plus / Minus
Query: 489 cttgctcctcaggtacatgttgtcagtctgcagatccatctcccttttttgcatatagtc 548
||||||||||||||| ||||| || | || || ||||| ||||| || |||||||| ||
Sbjct: 651 cttgctcctcaggtaaatgttatcgttatgtagctccatttccctcttctgcatatactc 592
Query: 549 aacttcagcgtatagcagctcattctttctagctctaatcttgattatggctttctccag 608
||||||||| || | ||||||||||||||||||||| |||||| |||| ||||||||||
Sbjct: 591 aacttcagcatacatcagctcattctttctagctcttatcttggctatgcctttctccag 532
Query: 609 cttgccctccatttgtttaagatccctgaggcccatggtgtggatggaatctcccactat 668
| |||| || | || ||||||||||| ||| ||||||| || ||||||| ||| |
Sbjct: 531 cctgccttcaagctgcttaagatccctcagggtcatggtgctgacagaatctctcaccag 472
Query: 669 gttcctagtgtttgcgttttgcaagctgtggatcatctgtcgcagcttggaggactcctg 728
|||| |||||| |||||||||||| |||| ||| ||||||||||||||||||||
Sbjct: 471 tgacctactgtttgagttttgcaagctactgatctgctggcgcagcttggaggactcctg 412
Query: 729 ctggtagtactgggcattgacttctgcaactgtgccagagttggaggagtcactgttggc 788
|||||||||||||||||||||||||||||| |||||||||||||| | ||||||||||||
Sbjct: 411 ctggtagtactgggcattgacttctgcaaccgtgccagagttggatgtgtcactgttggc 352
Query: 789 cttcttgtacctctcaatggtggacttcacactgttgttggcgtactcgtagaggcggcc 848
||| ||||||||||||||||||| |||||||||||||| | ||| ||||||||||| ||
Sbjct: 351 ctttttgtacctctcaatggtggctttcacactgttgtttgagtattcgtagaggcgccc 292
Query: 849 gcggctggagaagacgacgagcgcgacctcggcgtcgcagagcaccgagagctcgtacgc 908
||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 291 gcggctggagaagacgacgagggcgacctcggcgtcacagagcaccgagagctcgtacgc 232
Query: 909 cttcttgagcaggccgttgcggcgcttgcagaaggtcacctgccggctcgtcgtgttctc 968
||||||||| |||||||||||||||||||||||||| ||||||||| | || ||||||||
Sbjct: 231 cttcttgaggaggccgttgcggcgcttgcagaaggtgacctgccggttggtggtgttctc 172
Query: 969 gatgcgcttgatctcgatc 987
|||||||||||||||||||
Sbjct: 171 gatgcgcttgatctcgatc 153
>gb|AL506475.1|AL506475 AL506475 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY03E09T 5',
mRNA sequence
Length = 673
Score = 444 bits (224), Expect = e-123
Identities = 293/316 (92%)
Strand = Plus / Minus
Query: 672 cctagtgtttgcgttttgcaagctgtggatcatctgtcgcagcttggaggactcctgctg 731
|||| |||||| |||||||||||| |||| ||| |||||||||||||||||||||||
Sbjct: 525 cctactgtttgagttttgcaagctactgatctgctggcgcagcttggaggactcctgctg 466
Query: 732 gtagtactgggcattgacttctgcaactgtgccagagttggaggagtcactgttggcctt 791
||||||||||||||||||||||||||| |||||||||||||| | |||||||||||||||
Sbjct: 465 gtagtactgggcattgacttctgcaaccgtgccagagttggatgtgtcactgttggcctt 406
Query: 792 cttgtacctctcaatggtggacttcacactgttgttggcgtactcgtagaggcggccgcg 851
||||||||||||||||||| |||||||||||||| | |||||||||||||||||||||
Sbjct: 405 tttgtacctctcaatggtggctttcacactgttgtttgagtactcgtagaggcggccgcg 346
Query: 852 gctggagaagacgacgagcgcgacctcggcgtcgcagagcaccgagagctcgtacgcctt 911
|||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 345 gctggagaagacgacgagggcgacctcggcgtcacagagcaccgagagctcgtacgcctt 286
Query: 912 cttgagcaggccgttgcggcgcttgcagaaggtcacctgccggctcgtcgtgttctcgat 971
|||||| |||||||||||||||||||||||||| ||||||||| | || |||||||||||
Sbjct: 285 cttgaggaggccgttgcggcgcttgcagaaggtgacctgccggttggtggtgttctcgat 226
Query: 972 gcgcttgatctcgatc 987
||||||||||||||||
Sbjct: 225 gcgcttgatctcgatc 210
>gb|BU995744.1|BU995744 HM11D17r HM Hordeum vulgare subsp. vulgare cDNA clone HM11D17
5-PRIME, mRNA sequence
Length = 624
Score = 444 bits (224), Expect = e-123
Identities = 293/316 (92%)
Strand = Plus / Minus
Query: 672 cctagtgtttgcgttttgcaagctgtggatcatctgtcgcagcttggaggactcctgctg 731
|||| |||||| |||||||||||| |||| ||| |||||||||||||||||||||||
Sbjct: 538 cctactgtttgagttttgcaagctactgatctgctggcgcagcttggaggactcctgctg 479
Query: 732 gtagtactgggcattgacttctgcaactgtgccagagttggaggagtcactgttggcctt 791
||||||||||||||||||||||||||| |||||||||||||| | |||||||||||||||
Sbjct: 478 gtagtactgggcattgacttctgcaaccgtgccagagttggatgtgtcactgttggcctt 419
Query: 792 cttgtacctctcaatggtggacttcacactgttgttggcgtactcgtagaggcggccgcg 851
||||||||||||||||||| |||||||||||||| | |||||||||||||||||||||
Sbjct: 418 tttgtacctctcaatggtggctttcacactgttgtttgagtactcgtagaggcggccgcg 359
Query: 852 gctggagaagacgacgagcgcgacctcggcgtcgcagagcaccgagagctcgtacgcctt 911
|||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 358 gctggagaagacgacgagggcgacctcggcgtcacagagcaccgagagctcgtacgcctt 299
Query: 912 cttgagcaggccgttgcggcgcttgcagaaggtcacctgccggctcgtcgtgttctcgat 971
|||||| |||||||||||||||||||||||||| ||||||||| | || |||||||||||
Sbjct: 298 cttgaggaggccgttgcggcgcttgcagaaggtgacctgccggttggtggtgttctcgat 239
Query: 972 gcgcttgatctcgatc 987
||||||||||||||||
Sbjct: 238 gcgcttgatctcgatc 223
>gb|BU995877.1|BU995877 HM11K13r HM Hordeum vulgare subsp. vulgare cDNA clone HM11K13
5-PRIME, mRNA sequence
Length = 568
Score = 444 bits (224), Expect = e-123
Identities = 293/316 (92%)
Strand = Plus / Minus
Query: 672 cctagtgtttgcgttttgcaagctgtggatcatctgtcgcagcttggaggactcctgctg 731
|||| |||||| |||||||||||| |||| ||| |||||||||||||||||||||||
Sbjct: 538 cctactgtttgagttttgcaagctactgatctgctggcgcagcttggaggactcctgctg 479
Query: 732 gtagtactgggcattgacttctgcaactgtgccagagttggaggagtcactgttggcctt 791
||||||||||||||||||||||||||| |||||||||||||| | |||||||||||||||
Sbjct: 478 gtagtactgggcattgacttctgcaaccgtgccagagttggatgtgtcactgttggcctt 419
Query: 792 cttgtacctctcaatggtggacttcacactgttgttggcgtactcgtagaggcggccgcg 851
||||||||||||||||||| |||||||||||||| | |||||||||||||||||||||
Sbjct: 418 tttgtacctctcaatggtggctttcacactgttgtttgagtactcgtagaggcggccgcg 359
Query: 852 gctggagaagacgacgagcgcgacctcggcgtcgcagagcaccgagagctcgtacgcctt 911
|||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 358 gctggagaagacgacgagggcgacctcggcgtcacagagcaccgagagctcgtacgcctt 299
Query: 912 cttgagcaggccgttgcggcgcttgcagaaggtcacctgccggctcgtcgtgttctcgat 971
|||||| |||||||||||||||||||||||||| ||||||||| | || |||||||||||
Sbjct: 298 cttgaggaggccgttgcggcgcttgcagaaggtgacctgccggttggtggtgttctcgat 239
Query: 972 gcgcttgatctcgatc 987
||||||||||||||||
Sbjct: 238 gcgcttgatctcgatc 223
>gb|BU998535.1|BU998535 HI11F23r HI Hordeum vulgare subsp. vulgare cDNA clone HI11F23
5-PRIME, mRNA sequence
Length = 580
Score = 442 bits (223), Expect = e-122
Identities = 289/311 (92%)
Strand = Plus / Minus
Query: 677 tgtttgcgttttgcaagctgtggatcatctgtcgcagcttggaggactcctgctggtagt 736
|||||| |||||||||||| |||| ||| ||||||||||||||||||||||||||||
Sbjct: 533 tgtttgagttttgcaagctactgatctgctggcgcagcttggaggactcctgctggtagt 474
Query: 737 actgggcattgacttctgcaactgtgccagagttggaggagtcactgttggccttcttgt 796
|||||||||||||||||||||| |||||||||||||| | ||||||||||||||| ||||
Sbjct: 473 actgggcattgacttctgcaaccgtgccagagttggatgtgtcactgttggcctttttgt 414
Query: 797 acctctcaatggtggacttcacactgttgttggcgtactcgtagaggcggccgcggctgg 856
||||||||||||||| |||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 413 acctctcaatggtggctttcacactgttgtttgagtactcgtagaggcggccgcggctgg 354
Query: 857 agaagacgacgagcgcgacctcggcgtcgcagagcaccgagagctcgtacgccttcttga 916
||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 353 agaagacgacgagggcgacctcggcgtcacagagcaccgagagctcgtacgccttcttga 294
Query: 917 gcaggccgttgcggcgcttgcagaaggtcacctgccggctcgtcgtgttctcgatgcgct 976
| |||||||||||||||||||||||||| ||||||||| | || ||||||||||||||||
Sbjct: 293 ggaggccgttgcggcgcttgcagaaggtgacctgccggttggtggtgttctcgatgcgct 234
Query: 977 tgatctcgatc 987
|||||||||||
Sbjct: 233 tgatctcgatc 223
>gb|AL506480.1|AL506480 AL506480 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY03E14T 5',
mRNA sequence
Length = 700
Score = 325 bits (164), Expect = 2e-087
Identities = 248/276 (89%)
Strand = Plus / Minus
Query: 724 tcctgctggtagtactgggcattgacttctgcaactgtgccagagttggaggagtcactg 783
||||||||||||| ||||||||||| ||||| ||||| |||| | |||||| ||||||
Sbjct: 386 tcctgctggtagtgctgggcattgatctctgcgactgtaccagcgctggaggtgtcacta 327
Query: 784 ttggccttcttgtacctctcaatggtggacttcacactgttgttggcgtactcgtagagg 843
| ||||||||||| ||||||||||| | ||| || |||||||||| |||||| ||||||
Sbjct: 326 gttgccttcttgtatctctcaatggttgccttgacgctgttgttggagtactcatagagg 267
Query: 844 cggccgcggctggagaagacgacgagcgcgacctcggcgtcgcagagcaccgagagctcg 903
|| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 266 cgcccgcggctggaaaagacgacgagcgcgacctcagcgtcgcagagcaccgagagctcg 207
Query: 904 tacgccttcttgagcaggccgttgcggcgcttgcagaaggtcacctgccggctcgtcgtg 963
||||||||||| || || ||||||||||||||||||||||| ||||||||| ||||||||
Sbjct: 206 tacgccttcttcaggagtccgttgcggcgcttgcagaaggtgacctgccggttcgtcgtg 147
Query: 964 ttctcgatgcgcttgatctcgatcttgcctctcccc 999
|||||||||||||||||||||||| | |||||||||
Sbjct: 146 ttctcgatgcgcttgatctcgatcctccctctcccc 111
>gb|AL506894.1|AL506894 AL506894 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY04I23T 5',
mRNA sequence
Length = 700
Score = 325 bits (164), Expect = 2e-087
Identities = 248/276 (89%)
Strand = Plus / Minus
Query: 724 tcctgctggtagtactgggcattgacttctgcaactgtgccagagttggaggagtcactg 783
||||||||||||| ||||||||||| ||||| ||||| |||| | |||||| ||||||
Sbjct: 465 tcctgctggtagtgctgggcattgatctctgcgactgtaccagcgctggaggtgtcacta 406
Query: 784 ttggccttcttgtacctctcaatggtggacttcacactgttgttggcgtactcgtagagg 843
| ||||||||||| ||||||||||| | ||| || |||||||||| |||||| ||||||
Sbjct: 405 gttgccttcttgtatctctcaatggttgccttgacgctgttgttggagtactcatagagg 346
Query: 844 cggccgcggctggagaagacgacgagcgcgacctcggcgtcgcagagcaccgagagctcg 903
|| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 345 cgcccgcggctggaaaagacgacgagcgcgacctcagcgtcgcagagcaccgagagctcg 286
Query: 904 tacgccttcttgagcaggccgttgcggcgcttgcagaaggtcacctgccggctcgtcgtg 963
||||||||||| || || ||||||||||||||||||||||| ||||||||| ||||||||
Sbjct: 285 tacgccttcttcaggagtccgttgcggcgcttgcagaaggtgacctgccggttcgtcgtg 226
Query: 964 ttctcgatgcgcttgatctcgatcttgcctctcccc 999
|||||||||||||||||||||||| | |||||||||
Sbjct: 225 ttctcgatgcgcttgatctcgatcctccctctcccc 190
>gb|AL507763.1|AL507763 AL507763 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY06M13V 5',
mRNA sequence
Length = 700
Score = 325 bits (164), Expect = 2e-087
Identities = 248/276 (89%)
Strand = Plus / Minus
Query: 724 tcctgctggtagtactgggcattgacttctgcaactgtgccagagttggaggagtcactg 783
||||||||||||| ||||||||||| ||||| ||||| |||| | |||||| ||||||
Sbjct: 485 tcctgctggtagtgctgggcattgatctctgcgactgtaccagcgctggaggtgtcacta 426
Query: 784 ttggccttcttgtacctctcaatggtggacttcacactgttgttggcgtactcgtagagg 843
| ||||||||||| ||||||||||| | ||| || |||||||||| |||||| ||||||
Sbjct: 425 gttgccttcttgtatctctcaatggttgccttgacgctgttgttggagtactcatagagg 366
Query: 844 cggccgcggctggagaagacgacgagcgcgacctcggcgtcgcagagcaccgagagctcg 903
|| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 365 cgcccgcggctggaaaagacgacgagcgcgacctcagcgtcgcagagcaccgagagctcg 306
Query: 904 tacgccttcttgagcaggccgttgcggcgcttgcagaaggtcacctgccggctcgtcgtg 963
||||||||||| || || ||||||||||||||||||||||| ||||||||| ||||||||
Sbjct: 305 tacgccttcttcaggagtccgttgcggcgcttgcagaaggtgacctgccggttcgtcgtg 246
Query: 964 ttctcgatgcgcttgatctcgatcttgcctctcccc 999
|||||||||||||||||||||||| | |||||||||
Sbjct: 245 ttctcgatgcgcttgatctcgatcctccctctcccc 210
>gb|AL508019.1|AL508019 AL508019 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY07I15V 5',
mRNA sequence
Length = 700
Score = 325 bits (164), Expect = 2e-087
Identities = 248/276 (89%)
Strand = Plus / Minus
Query: 724 tcctgctggtagtactgggcattgacttctgcaactgtgccagagttggaggagtcactg 783
||||||||||||| ||||||||||| ||||| ||||| |||| | |||||| ||||||
Sbjct: 413 tcctgctggtagtgctgggcattgatctctgcgactgtaccagcgctggaggtgtcacta 354
Query: 784 ttggccttcttgtacctctcaatggtggacttcacactgttgttggcgtactcgtagagg 843
| ||||||||||| ||||||||||| | ||| || |||||||||| |||||| ||||||
Sbjct: 353 gttgccttcttgtatctctcaatggttgccttgacgctgttgttggagtactcatagagg 294
Query: 844 cggccgcggctggagaagacgacgagcgcgacctcggcgtcgcagagcaccgagagctcg 903
|| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 293 cgcccgcggctggaaaagacgacgagcgcgacctcagcgtcgcagagcaccgagagctcg 234
Query: 904 tacgccttcttgagcaggccgttgcggcgcttgcagaaggtcacctgccggctcgtcgtg 963
||||||||||| || || ||||||||||||||||||||||| ||||||||| ||||||||
Sbjct: 233 tacgccttcttcaggagtccgttgcggcgcttgcagaaggtgacctgccggttcgtcgtg 174
Query: 964 ttctcgatgcgcttgatctcgatcttgcctctcccc 999
|||||||||||||||||||||||| | |||||||||
Sbjct: 173 ttctcgatgcgcttgatctcgatcctccctctcccc 138
>gb|AL509053.1|AL509053 AL509053 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY10J07V 5',
mRNA sequence
Length = 700
Score = 325 bits (164), Expect = 2e-087
Identities = 248/276 (89%)
Strand = Plus / Minus
Query: 724 tcctgctggtagtactgggcattgacttctgcaactgtgccagagttggaggagtcactg 783
||||||||||||| ||||||||||| ||||| ||||| |||| | |||||| ||||||
Sbjct: 414 tcctgctggtagtgctgggcattgatctctgcgactgtaccagcgctggaggtgtcacta 355
Query: 784 ttggccttcttgtacctctcaatggtggacttcacactgttgttggcgtactcgtagagg 843
| ||||||||||| ||||||||||| | ||| || |||||||||| |||||| ||||||
Sbjct: 354 gttgccttcttgtatctctcaatggttgccttgacgctgttgttggagtactcatagagg 295
Query: 844 cggccgcggctggagaagacgacgagcgcgacctcggcgtcgcagagcaccgagagctcg 903
|| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 294 cgcccgcggctggaaaagacgacgagcgcgacctcagcgtcgcagagcaccgagagctcg 235
Query: 904 tacgccttcttgagcaggccgttgcggcgcttgcagaaggtcacctgccggctcgtcgtg 963
||||||||||| || || ||||||||||||||||||||||| ||||||||| ||||||||
Sbjct: 234 tacgccttcttcaggagtccgttgcggcgcttgcagaaggtgacctgccggttcgtcgtg 175
Query: 964 ttctcgatgcgcttgatctcgatcttgcctctcccc 999
|||||||||||||||||||||||| | |||||||||
Sbjct: 174 ttctcgatgcgcttgatctcgatcctccctctcccc 139
Score = 48.1 bits (24), Expect = 7e-004
Identities = 63/76 (82%)
Strand = Plus / Minus
Query: 515 tctgcagatccatctcccttttttgcatatagtcaacttcagcgtatagcagctcattct 574
||||||| ||||| |||||| | ||||| || |||| ||||||| ||| | |||||||
Sbjct: 620 tctgcagctccatttcccttctctgcatgtactcaatttcagcgcttagtaattcattct 561
Query: 575 ttctagctctaatctt 590
|||| |||||||||||
Sbjct: 560 ttcttgctctaatctt 545
>gb|BE454695.2|BE454695 HVSMEh0095C18f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0095C18f, mRNA sequence
Length = 880
Score = 325 bits (164), Expect = 2e-087
Identities = 248/276 (89%)
Strand = Plus / Minus
Query: 724 tcctgctggtagtactgggcattgacttctgcaactgtgccagagttggaggagtcactg 783
||||||||||||| ||||||||||| ||||| ||||| |||| | |||||| ||||||
Sbjct: 409 tcctgctggtagtgctgggcattgatctctgcgactgtaccagcgctggaggtgtcacta 350
Query: 784 ttggccttcttgtacctctcaatggtggacttcacactgttgttggcgtactcgtagagg 843
| ||||||||||| ||||||||||| | ||| || |||||||||| |||||| ||||||
Sbjct: 349 gttgccttcttgtatctctcaatggttgccttgacgctgttgttggagtactcatagagg 290
Query: 844 cggccgcggctggagaagacgacgagcgcgacctcggcgtcgcagagcaccgagagctcg 903
|| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 289 cgcccgcggctggaaaagacgacgagcgcgacctcagcgtcgcagagcaccgagagctcg 230
Query: 904 tacgccttcttgagcaggccgttgcggcgcttgcagaaggtcacctgccggctcgtcgtg 963
||||||||||| || || ||||||||||||||||||||||| ||||||||| ||||||||
Sbjct: 229 tacgccttcttcaggagtccgttgcggcgcttgcagaaggtgacctgccggttcgtcgtg 170
Query: 964 ttctcgatgcgcttgatctcgatcttgcctctcccc 999
|||||||||||||||||||||||| | |||||||||
Sbjct: 169 ttctcgatgcgcttgatctcgatcctccctctcccc 134
Score = 48.1 bits (24), Expect = 7e-004
Identities = 57/68 (83%)
Strand = Plus / Minus
Query: 523 tccatctcccttttttgcatatagtcaacttcagcgtatagcagctcattctttctagct 582
||||| |||||||| ||||| || |||| ||||||| ||| | ||||||||||| |||
Sbjct: 607 tccatttcccttttctgcatgtactcaatttcagcgcttagtaattcattctttcttgct 548
Query: 583 ctaatctt 590
||||||||
Sbjct: 547 ctaatctt 540
>gb|BG367358.1|BG367358 HVSMEi0011P20f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0011P20f, mRNA sequence
Length = 512
Score = 325 bits (164), Expect = 2e-087
Identities = 248/276 (89%)
Strand = Plus / Minus
Query: 724 tcctgctggtagtactgggcattgacttctgcaactgtgccagagttggaggagtcactg 783
||||||||||||| ||||||||||| ||||| ||||| |||| | |||||| ||||||
Sbjct: 300 tcctgctggtagtgctgggcattgatctctgcgactgtaccagcgctggaggtgtcacta 241
Query: 784 ttggccttcttgtacctctcaatggtggacttcacactgttgttggcgtactcgtagagg 843
| ||||||||||| ||||||||||| | ||| || |||||||||| |||||| ||||||
Sbjct: 240 gttgccttcttgtatctctcaatggttgccttgacgctgttgttggagtactcatagagg 181
Query: 844 cggccgcggctggagaagacgacgagcgcgacctcggcgtcgcagagcaccgagagctcg 903
|| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 180 cgcccgcggctggaaaagacgacgagcgcgacctcagcgtcgcagagcaccgagagctcg 121
Query: 904 tacgccttcttgagcaggccgttgcggcgcttgcagaaggtcacctgccggctcgtcgtg 963
||||||||||| || || ||||||||||||||||||||||| ||||||||| ||||||||
Sbjct: 120 tacgccttcttcaggagtccgttgcggcgcttgcagaaggtgacctgccggttcgtcgtg 61
Query: 964 ttctcgatgcgcttgatctcgatcttgcctctcccc 999
|||||||||||||||||||||||| | |||||||||
Sbjct: 60 ttctcgatgcgcttgatctcgatcctccctctcccc 25
Score = 48.1 bits (24), Expect = 7e-004
Identities = 63/76 (82%)
Strand = Plus / Minus
Query: 515 tctgcagatccatctcccttttttgcatatagtcaacttcagcgtatagcagctcattct 574
||||||| ||||| |||||| | ||||| || |||| ||||||| ||| | |||||||
Sbjct: 506 tctgcagctccatttcccttctctgcatgtactcaatttcagcgcttagtaattcattct 447
Query: 575 ttctagctctaatctt 590
|||| |||||||||||
Sbjct: 446 ttcttgctctaatctt 431
>gb|BE454527.3|BE454527 HVSMEh0094C05f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0094C05f, mRNA sequence
Length = 916
Score = 325 bits (164), Expect = 2e-087
Identities = 248/276 (89%)
Strand = Plus / Minus
Query: 724 tcctgctggtagtactgggcattgacttctgcaactgtgccagagttggaggagtcactg 783
||||||||||||| ||||||||||| ||||| ||||| |||| | |||||| ||||||
Sbjct: 368 tcctgctggtagtgctgggcattgatctctgcgactgtaccagcgctggaggtgtcacta 309
Query: 784 ttggccttcttgtacctctcaatggtggacttcacactgttgttggcgtactcgtagagg 843
| ||||||||||| ||||||||||| | ||| || |||||||||| |||||| ||||||
Sbjct: 308 gttgccttcttgtatctctcaatggttgccttgacgctgttgttggagtactcatagagg 249
Query: 844 cggccgcggctggagaagacgacgagcgcgacctcggcgtcgcagagcaccgagagctcg 903
|| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 248 cgcccgcggctggaaaagacgacgagcgcgacctcagcgtcgcagagcaccgagagctcg 189
Query: 904 tacgccttcttgagcaggccgttgcggcgcttgcagaaggtcacctgccggctcgtcgtg 963
||||||||||| || || ||||||||||||||||||||||| ||||||||| ||||||||
Sbjct: 188 tacgccttcttcaggagtccgttgcggcgcttgcagaaggtgacctgccggttcgtcgtg 129
Query: 964 ttctcgatgcgcttgatctcgatcttgcctctcccc 999
|||||||||||||||||||||||| | |||||||||
Sbjct: 128 ttctcgatgcgcttgatctcgatcctccctctcccc 93
>gb|BG414586.2|BG414586 HVSMEk0002P16f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0002P16f, mRNA sequence
Length = 804
Score = 325 bits (164), Expect = 2e-087
Identities = 248/276 (89%)
Strand = Plus / Minus
Query: 724 tcctgctggtagtactgggcattgacttctgcaactgtgccagagttggaggagtcactg 783
||||||||||||| ||||||||||| ||||| ||||| |||| | |||||| ||||||
Sbjct: 409 tcctgctggtagtgctgggcattgatctctgcgactgtaccagcgctggaggtgtcacta 350
Query: 784 ttggccttcttgtacctctcaatggtggacttcacactgttgttggcgtactcgtagagg 843
| ||||||||||| ||||||||||| | ||| || |||||||||| |||||| ||||||
Sbjct: 349 gttgccttcttgtatctctcaatggttgccttgacgctgttgttggagtactcatagagg 290
Query: 844 cggccgcggctggagaagacgacgagcgcgacctcggcgtcgcagagcaccgagagctcg 903
|| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 289 cgcccgcggctggaaaagacgacgagcgcgacctcagcgtcgcagagcaccgagagctcg 230
Query: 904 tacgccttcttgagcaggccgttgcggcgcttgcagaaggtcacctgccggctcgtcgtg 963
||||||||||| || || ||||||||||||||||||||||| ||||||||| ||||||||
Sbjct: 229 tacgccttcttcaggagtccgttgcggcgcttgcagaaggtgacctgccggttcgtcgtg 170
Query: 964 ttctcgatgcgcttgatctcgatcttgcctctcccc 999
|||||||||||||||||||||||| | |||||||||
Sbjct: 169 ttctcgatgcgcttgatctcgatcctccctctcccc 134
Score = 40.1 bits (20), Expect = 0.17
Identities = 62/76 (81%)
Strand = Plus / Minus
Query: 515 tctgcagatccatctcccttttttgcatatagtcaacttcagcgtatagcagctcattct 574
||||||| ||||| ||| || | ||||| || |||| ||||||| ||| | |||||||
Sbjct: 615 tctgcagctccatttcctttctctgcatgtactcaatttcagcgcttagtaattcattct 556
Query: 575 ttctagctctaatctt 590
|||| |||||||||||
Sbjct: 555 ttcttgctctaatctt 540
>gb|BQ462735.1|BQ462735 HI01N16T HI Hordeum vulgare subsp. vulgare cDNA clone HI01N16
5-PRIME, mRNA sequence
Length = 547
Score = 325 bits (164), Expect = 2e-087
Identities = 248/276 (89%)
Strand = Plus / Minus
Query: 724 tcctgctggtagtactgggcattgacttctgcaactgtgccagagttggaggagtcactg 783
||||||||||||| ||||||||||| ||||| ||||| |||| | |||||| ||||||
Sbjct: 422 tcctgctggtagtgctgggcattgatctctgcgactgtaccagcgctggaggtgtcacta 363
Query: 784 ttggccttcttgtacctctcaatggtggacttcacactgttgttggcgtactcgtagagg 843
| ||||||||||| ||||||||||| | ||| || |||||||||| |||||| ||||||
Sbjct: 362 gttgccttcttgtatctctcaatggttgccttgacgctgttgttggagtactcatagagg 303
Query: 844 cggccgcggctggagaagacgacgagcgcgacctcggcgtcgcagagcaccgagagctcg 903
|| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 302 cgcccgcggctggaaaagacgacgagcgcgacctcagcgtcgcagagcaccgagagctcg 243
Query: 904 tacgccttcttgagcaggccgttgcggcgcttgcagaaggtcacctgccggctcgtcgtg 963
||||||||||| || || ||||||||||||||||||||||| ||||||||| ||||||||
Sbjct: 242 tacgccttcttcaggagtccgttgcggcgcttgcagaaggtgacctgccggttcgtcgtg 183
Query: 964 ttctcgatgcgcttgatctcgatcttgcctctcccc 999
|||||||||||||||||||||||| | |||||||||
Sbjct: 182 ttctcgatgcgcttgatctcgatcctccctctcccc 147
>gb|BQ764786.1|BQ764786 EBca01_SQ004_L21_R carpel, pre-anthesis, no treatment, cv Optic,
EBca01 Hordeum vulgare subsp. vulgare cDNA clone
EBca01_SQ004_L21 5', mRNA sequence
Length = 719
Score = 325 bits (164), Expect = 2e-087
Identities = 248/276 (89%)
Strand = Plus / Minus
Query: 724 tcctgctggtagtactgggcattgacttctgcaactgtgccagagttggaggagtcactg 783
||||||||||||| ||||||||||| ||||| ||||| |||| | |||||| ||||||
Sbjct: 391 tcctgctggtagtgctgggcattgatctctgcgactgtaccagcgctggaggtgtcacta 332
Query: 784 ttggccttcttgtacctctcaatggtggacttcacactgttgttggcgtactcgtagagg 843
| ||||||||||| ||||||||||| | ||| || |||||||||| |||||| ||||||
Sbjct: 331 gttgccttcttgtatctctcaatggttgccttgacgctgttgttggagtactcatagagg 272
Query: 844 cggccgcggctggagaagacgacgagcgcgacctcggcgtcgcagagcaccgagagctcg 903
|| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 271 cgcccgcggctggaaaagacgacgagcgcgacctcagcgtcgcagagcaccgagagctcg 212
Query: 904 tacgccttcttgagcaggccgttgcggcgcttgcagaaggtcacctgccggctcgtcgtg 963
||||||||||| || || ||||||||||||||||||||||| ||||||||| ||||||||
Sbjct: 211 tacgccttcttcaggagtccgttgcggcgcttgcagaaggtgacctgccggttcgtcgtg 152
Query: 964 ttctcgatgcgcttgatctcgatcttgcctctcccc 999
|||||||||||||||||||||||| | |||||||||
Sbjct: 151 ttctcgatgcgcttgatctcgatcctccctctcccc 116
Score = 42.1 bits (21), Expect = 0.043
Identities = 62/76 (81%)
Strand = Plus / Minus
Query: 515 tctgcagatccatctcccttttttgcatatagtcaacttcagcgtatagcagctcattct 574
||||||| ||||| |||||| | ||||| || |||| ||||||| ||| | |||||||
Sbjct: 597 tctgcagctccatttcccttctctgcatgtactcaatttcagcgcttagtaattcattct 538
Query: 575 ttctagctctaatctt 590
|||| ||| |||||||
Sbjct: 537 ttcttgctntaatctt 522
>gb|BU969355.1|BU969355 HB11E16r BC Hordeum vulgare subsp. vulgare cDNA clone HB11E16
5-PRIME, mRNA sequence
Length = 463
Score = 325 bits (164), Expect = 2e-087
Identities = 248/276 (89%)
Strand = Plus / Minus
Query: 724 tcctgctggtagtactgggcattgacttctgcaactgtgccagagttggaggagtcactg 783
||||||||||||| ||||||||||| ||||| ||||| |||| | |||||| ||||||
Sbjct: 428 tcctgctggtagtgctgggcattgatctctgcgactgtaccagcgctggaggtgtcacta 369
Query: 784 ttggccttcttgtacctctcaatggtggacttcacactgttgttggcgtactcgtagagg 843
| ||||||||||| ||||||||||| | ||| || |||||||||| |||||| ||||||
Sbjct: 368 gttgccttcttgtatctctcaatggttgccttgacgctgttgttggagtactcatagagg 309
Query: 844 cggccgcggctggagaagacgacgagcgcgacctcggcgtcgcagagcaccgagagctcg 903
|| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 308 cgcccgcggctggaaaagacgacgagcgcgacctcagcgtcgcagagcaccgagagctcg 249
Query: 904 tacgccttcttgagcaggccgttgcggcgcttgcagaaggtcacctgccggctcgtcgtg 963
||||||||||| || || ||||||||||||||||||||||| ||||||||| ||||||||
Sbjct: 248 tacgccttcttcaggagtccgttgcggcgcttgcagaaggtgacctgccggttcgtcgtg 189
Query: 964 ttctcgatgcgcttgatctcgatcttgcctctcccc 999
|||||||||||||||||||||||| | |||||||||
Sbjct: 188 ttctcgatgcgcttgatctcgatcctccctctcccc 153
>gb|BU973813.1|BU973813 HB26A20r BC Hordeum vulgare subsp. vulgare cDNA clone HB26A20
5-PRIME, mRNA sequence
Length = 554
Score = 325 bits (164), Expect = 2e-087
Identities = 248/276 (89%)
Strand = Plus / Minus
Query: 724 tcctgctggtagtactgggcattgacttctgcaactgtgccagagttggaggagtcactg 783
||||||||||||| ||||||||||| ||||| ||||| |||| | |||||| ||||||
Sbjct: 402 tcctgctggtagtgctgggcattgatctctgcgactgtaccagcgctggaggtgtcacta 343
Query: 784 ttggccttcttgtacctctcaatggtggacttcacactgttgttggcgtactcgtagagg 843
| ||||||||||| ||||||||||| | ||| || |||||||||| |||||| ||||||
Sbjct: 342 gttgccttcttgtatctctcaatggttgccttgacgctgttgttggagtactcatagagg 283
Query: 844 cggccgcggctggagaagacgacgagcgcgacctcggcgtcgcagagcaccgagagctcg 903
|| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 282 cgcccgcggctggaaaagacgacgagcgcgacctcagcgtcgcagagcaccgagagctcg 223
Query: 904 tacgccttcttgagcaggccgttgcggcgcttgcagaaggtcacctgccggctcgtcgtg 963
||||||||||| || || ||||||||||||||||||||||| ||||||||| ||||||||
Sbjct: 222 tacgccttcttcaggagtccgttgcggcgcttgcagaaggtgacctgccggttcgtcgtg 163
Query: 964 ttctcgatgcgcttgatctcgatcttgcctctcccc 999
|||||||||||||||||||||||| | |||||||||
Sbjct: 162 ttctcgatgcgcttgatctcgatcctccctctcccc 127
>gb|BU996265.1|BU996265 HM13B01r HM Hordeum vulgare subsp. vulgare cDNA clone HM13B01
5-PRIME, mRNA sequence
Length = 637
Score = 325 bits (164), Expect = 2e-087
Identities = 248/276 (89%)
Strand = Plus / Minus
Query: 724 tcctgctggtagtactgggcattgacttctgcaactgtgccagagttggaggagtcactg 783
||||||||||||| ||||||||||| ||||| ||||| |||| | |||||| ||||||
Sbjct: 417 tcctgctggtagtgctgggcattgatctctgcgactgtaccagcgctggaggtgtcacta 358
Query: 784 ttggccttcttgtacctctcaatggtggacttcacactgttgttggcgtactcgtagagg 843
| ||||||||||| ||||||||||| | ||| || |||||||||| |||||| ||||||
Sbjct: 357 gttgccttcttgtatctctcaatggttgccttgacgctgttgttggagtactcatagagg 298
Query: 844 cggccgcggctggagaagacgacgagcgcgacctcggcgtcgcagagcaccgagagctcg 903
|| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 297 cgcccgcggctggaaaagacgacgagcgcgacctcagcgtcgcagagcaccgagagctcg 238
Query: 904 tacgccttcttgagcaggccgttgcggcgcttgcagaaggtcacctgccggctcgtcgtg 963
||||||||||| || || ||||||||||||||||||||||| ||||||||| ||||||||
Sbjct: 237 tacgccttcttcaggagtccgttgcggcgcttgcagaaggtgacctgccggttcgtcgtg 178
Query: 964 ttctcgatgcgcttgatctcgatcttgcctctcccc 999
|||||||||||||||||||||||| | |||||||||
Sbjct: 177 ttctcgatgcgcttgatctcgatcctccctctcccc 142
Score = 48.1 bits (24), Expect = 7e-004
Identities = 63/76 (82%)
Strand = Plus / Minus
Query: 515 tctgcagatccatctcccttttttgcatatagtcaacttcagcgtatagcagctcattct 574
||||||| ||||| |||||| | ||||| || |||| ||||||| ||| | |||||||
Sbjct: 623 tctgcagctccatttcccttctctgcatgtactcaatttcagcgcttagtaattcattct 564
Query: 575 ttctagctctaatctt 590
|||| |||||||||||
Sbjct: 563 ttcttgctctaatctt 548
>gb|CA024629.1|CA024629 HZ49N15r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ49N15
5-PRIME, mRNA sequence
Length = 633
Score = 325 bits (164), Expect = 2e-087
Identities = 248/276 (89%)
Strand = Plus / Minus
Query: 724 tcctgctggtagtactgggcattgacttctgcaactgtgccagagttggaggagtcactg 783
||||||||||||| ||||||||||| ||||| ||||| |||| | |||||| ||||||
Sbjct: 431 tcctgctggtagtgctgggcattgatctctgcgactgtaccagcgctggaggtgtcacta 372
Query: 784 ttggccttcttgtacctctcaatggtggacttcacactgttgttggcgtactcgtagagg 843
| ||||||||||| ||||||||||| | ||| || |||||||||| |||||| ||||||
Sbjct: 371 gttgccttcttgtatctctcaatggttgccttgacgctgttgttggagtactcatagagg 312
Query: 844 cggccgcggctggagaagacgacgagcgcgacctcggcgtcgcagagcaccgagagctcg 903
|| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 311 cgcccgcggctggaaaagacgacgagcgcgacctcagcgtcgcagagcaccgagagctcg 252
Query: 904 tacgccttcttgagcaggccgttgcggcgcttgcagaaggtcacctgccggctcgtcgtg 963
||||||||||| || || ||||||||||||||||||||||| ||||||||| ||||||||
Sbjct: 251 tacgccttcttcaggagtccgttgcggcgcttgcagaaggtgacctgccggttcgtcgtg 192
Query: 964 ttctcgatgcgcttgatctcgatcttgcctctcccc 999
|||||||||||||||||||||||| | |||||||||
Sbjct: 191 ttctcgatgcgcttgatctcgatcctccctctcccc 156
Score = 40.1 bits (20), Expect = 0.17
Identities = 56/68 (82%)
Strand = Plus / Minus
Query: 523 tccatctcccttttttgcatatagtcaacttcagcgtatagcagctcattctttctagct 582
||||| |||||| | ||||| || |||| ||||||| ||| | ||||||||||| |||
Sbjct: 629 tccatttcccttctctgcatgtactcaatttcagcgcttagtaattcattctttcttgct 570
Query: 583 ctaatctt 590
||||||||
Sbjct: 569 ctaatctt 562
>gb|CA025405.1|CA025405 HZ52B05r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ52B05
5-PRIME, mRNA sequence
Length = 553
Score = 325 bits (164), Expect = 2e-087
Identities = 248/276 (89%)
Strand = Plus / Minus
Query: 724 tcctgctggtagtactgggcattgacttctgcaactgtgccagagttggaggagtcactg 783
||||||||||||| ||||||||||| ||||| ||||| |||| | |||||| ||||||
Sbjct: 381 tcctgctggtagtgctgggcattgatctctgcgactgtaccagcgctggaggtgtcacta 322
Query: 784 ttggccttcttgtacctctcaatggtggacttcacactgttgttggcgtactcgtagagg 843
| ||||||||||| ||||||||||| | ||| || |||||||||| |||||| ||||||
Sbjct: 321 gttgccttcttgtatctctcaatggttgccttgacgctgttgttggagtactcatagagg 262
Query: 844 cggccgcggctggagaagacgacgagcgcgacctcggcgtcgcagagcaccgagagctcg 903
|| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 261 cgcccgcggctggaaaagacgacgagcgcgacctcagcgtcgcagagcaccgagagctcg 202
Query: 904 tacgccttcttgagcaggccgttgcggcgcttgcagaaggtcacctgccggctcgtcgtg 963
||||||||||| || || ||||||||||||||||||||||| ||||||||| ||||||||
Sbjct: 201 tacgccttcttcaggagtccgttgcggcgcttgcagaaggtgacctgccggttcgtcgtg 142
Query: 964 ttctcgatgcgcttgatctcgatcttgcctctcccc 999
|||||||||||||||||||||||| | |||||||||
Sbjct: 141 ttctcgatgcgcttgatctcgatcctccctctcccc 106
>gb|CA025534.1|CA025534 HZ52G24r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ52G24
5-PRIME, mRNA sequence
Length = 542
Score = 325 bits (164), Expect = 2e-087
Identities = 248/276 (89%)
Strand = Plus / Minus
Query: 724 tcctgctggtagtactgggcattgacttctgcaactgtgccagagttggaggagtcactg 783
||||||||||||| ||||||||||| ||||| ||||| |||| | |||||| ||||||
Sbjct: 369 tcctgctggtagtgctgggcattgatctctgcgactgtaccagcgctggaggtgtcacta 310
Query: 784 ttggccttcttgtacctctcaatggtggacttcacactgttgttggcgtactcgtagagg 843
| ||||||||||| ||||||||||| | ||| || |||||||||| |||||| ||||||
Sbjct: 309 gttgccttcttgtatctctcaatggttgccttgacgctgttgttggagtactcatagagg 250
Query: 844 cggccgcggctggagaagacgacgagcgcgacctcggcgtcgcagagcaccgagagctcg 903
|| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 249 cgcccgcggctggaaaagacgacgagcgcgacctcagcgtcgcagagcaccgagagctcg 190
Query: 904 tacgccttcttgagcaggccgttgcggcgcttgcagaaggtcacctgccggctcgtcgtg 963
||||||||||| || || ||||||||||||||||||||||| ||||||||| ||||||||
Sbjct: 189 tacgccttcttcaggagtccgttgcggcgcttgcagaaggtgacctgccggttcgtcgtg 130
Query: 964 ttctcgatgcgcttgatctcgatcttgcctctcccc 999
|||||||||||||||||||||||| | |||||||||
Sbjct: 129 ttctcgatgcgcttgatctcgatcctccctctcccc 94
>gb|CA025584.1|CA025584 HZ52J05r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ52J05
5-PRIME, mRNA sequence
Length = 574
Score = 325 bits (164), Expect = 2e-087
Identities = 248/276 (89%)
Strand = Plus / Minus
Query: 724 tcctgctggtagtactgggcattgacttctgcaactgtgccagagttggaggagtcactg 783
||||||||||||| ||||||||||| ||||| ||||| |||| | |||||| ||||||
Sbjct: 401 tcctgctggtagtgctgggcattgatctctgcgactgtaccagcgctggaggtgtcacta 342
Query: 784 ttggccttcttgtacctctcaatggtggacttcacactgttgttggcgtactcgtagagg 843
| ||||||||||| ||||||||||| | ||| || |||||||||| |||||| ||||||
Sbjct: 341 gttgccttcttgtatctctcaatggttgccttgacgctgttgttggagtactcatagagg 282
Query: 844 cggccgcggctggagaagacgacgagcgcgacctcggcgtcgcagagcaccgagagctcg 903
|| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 281 cgcccgcggctggaaaagacgacgagcgcgacctcagcgtcgcagagcaccgagagctcg 222
Query: 904 tacgccttcttgagcaggccgttgcggcgcttgcagaaggtcacctgccggctcgtcgtg 963
||||||||||| || || ||||||||||||||||||||||| ||||||||| ||||||||
Sbjct: 221 tacgccttcttcaggagtccgttgcggcgcttgcagaaggtgacctgccggttcgtcgtg 162
Query: 964 ttctcgatgcgcttgatctcgatcttgcctctcccc 999
|||||||||||||||||||||||| | |||||||||
Sbjct: 161 ttctcgatgcgcttgatctcgatcctccctctcccc 126
>gb|CA028005.1|CA028005 HZ60L09r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ60L09
5-PRIME, mRNA sequence
Length = 479
Score = 325 bits (164), Expect = 2e-087
Identities = 248/276 (89%)
Strand = Plus / Minus
Query: 724 tcctgctggtagtactgggcattgacttctgcaactgtgccagagttggaggagtcactg 783
||||||||||||| ||||||||||| ||||| ||||| |||| | |||||| ||||||
Sbjct: 410 tcctgctggtagtgctgggcattgatctctgcgactgtaccagcgctggaggtgtcacta 351
Query: 784 ttggccttcttgtacctctcaatggtggacttcacactgttgttggcgtactcgtagagg 843
| ||||||||||| ||||||||||| | ||| || |||||||||| |||||| ||||||
Sbjct: 350 gttgccttcttgtatctctcaatggttgccttgacgctgttgttggagtactcatagagg 291
Query: 844 cggccgcggctggagaagacgacgagcgcgacctcggcgtcgcagagcaccgagagctcg 903
|| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 290 cgcccgcggctggaaaagacgacgagcgcgacctcagcgtcgcagagcaccgagagctcg 231
Query: 904 tacgccttcttgagcaggccgttgcggcgcttgcagaaggtcacctgccggctcgtcgtg 963
||||||||||| || || ||||||||||||||||||||||| ||||||||| ||||||||
Sbjct: 230 tacgccttcttcaggagtccgttgcggcgcttgcagaaggtgacctgccggttcgtcgtg 171
Query: 964 ttctcgatgcgcttgatctcgatcttgcctctcccc 999
|||||||||||||||||||||||| | |||||||||
Sbjct: 170 ttctcgatgcgcttgatctcgatcctccctctcccc 135
>gb|CA028663.1|CA028663 HZ62N08r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ62N08
5-PRIME, mRNA sequence
Length = 546
Score = 325 bits (164), Expect = 2e-087
Identities = 248/276 (89%)
Strand = Plus / Minus
Query: 724 tcctgctggtagtactgggcattgacttctgcaactgtgccagagttggaggagtcactg 783
||||||||||||| ||||||||||| ||||| ||||| |||| | |||||| ||||||
Sbjct: 422 tcctgctggtagtgctgggcattgatctctgcgactgtaccagcgctggaggtgtcacta 363
Query: 784 ttggccttcttgtacctctcaatggtggacttcacactgttgttggcgtactcgtagagg 843
| ||||||||||| ||||||||||| | ||| || |||||||||| |||||| ||||||
Sbjct: 362 gttgccttcttgtatctctcaatggttgccttgacgctgttgttggagtactcatagagg 303
Query: 844 cggccgcggctggagaagacgacgagcgcgacctcggcgtcgcagagcaccgagagctcg 903
|| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 302 cgcccgcggctggaaaagacgacgagcgcgacctcagcgtcgcagagcaccgagagctcg 243
Query: 904 tacgccttcttgagcaggccgttgcggcgcttgcagaaggtcacctgccggctcgtcgtg 963
||||||||||| || || ||||||||||||||||||||||| ||||||||| ||||||||
Sbjct: 242 tacgccttcttcaggagtccgttgcggcgcttgcagaaggtgacctgccggttcgtcgtg 183
Query: 964 ttctcgatgcgcttgatctcgatcttgcctctcccc 999
|||||||||||||||||||||||| | |||||||||
Sbjct: 182 ttctcgatgcgcttgatctcgatcctccctctcccc 147
>gb|BG344090.1|BG344090 HVSMEg0007K02f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0007K02f, mRNA sequence
Length = 832
Score = 317 bits (160), Expect = 5e-085
Identities = 238/264 (90%)
Strand = Plus / Minus
Query: 724 tcctgctggtagtactgggcattgacttctgcaactgtgccagagttggaggagtcactg 783
||||||||||||| ||||||||||| ||||| ||||| |||| | |||||| ||||||
Sbjct: 265 tcctgctggtagtgctgggcattgatctctgcgactgtaccagcgctggaggtgtcacta 206
Query: 784 ttggccttcttgtacctctcaatggtggacttcacactgttgttggcgtactcgtagagg 843
| ||||||||||| ||||||||||| | ||| || |||||||||| |||||| ||||||
Sbjct: 205 gttgccttcttgtatctctcaatggttgccttgacgctgttgttggagtactcatagagg 146
Query: 844 cggccgcggctggagaagacgacgagcgcgacctcggcgtcgcagagcaccgagagctcg 903
|| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 145 cgcccgcggctggaaaagacgacgagcgcgacctcagcgtcgcagagcaccgagagctcg 86
Query: 904 tacgccttcttgagcaggccgttgcggcgcttgcagaaggtcacctgccggctcgtcgtg 963
||||||||||| || || ||||||||||||||||||||||| ||||||||| ||||||||
Sbjct: 85 tacgccttcttcaggagtccgttgcggcgcttgcagaaggtgacctgccggttcgtcgtg 26
Query: 964 ttctcgatgcgcttgatctcgatc 987
||||||||||||||||||||||||
Sbjct: 25 ttctcgatgcgcttgatctcgatc 2
>gb|AF486649.1| Hordeum vulgare subsp. vulgare AGAMOUS-like protein 2 HvAG2 (AG2)
mRNA, complete cds
Length = 1068
Score = 317 bits (160), Expect = 5e-085
Identities = 247/276 (89%)
Strand = Plus / Minus
Query: 724 tcctgctggtagtactgggcattgacttctgcaactgtgccagagttggaggagtcactg 783
||||||||||||| ||||||||||| ||||| ||||| |||| | |||||| ||||||
Sbjct: 367 tcctgctggtagtgctgggcattgatctctgcgactgtaccagcgctggaggtgtcacta 308
Query: 784 ttggccttcttgtacctctcaatggtggacttcacactgttgttggcgtactcgtagagg 843
| ||||||||||| ||||||||||| | ||| || |||||||||| |||||| ||||||
Sbjct: 307 gttgccttcttgtatctctcaatggttgccttgacgctgttgttggagtactcatagagg 248
Query: 844 cggccgcggctggagaagacgacgagcgcgacctcggcgtcgcagagcaccgagagctcg 903
|| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 247 cgcccgcggctggaaaagacgacgagcgcgacctcagcgtcgcagagcaccgagagctcg 188
Query: 904 tacgccttcttgagcaggccgttgcggcgcttgcagaaggtcacctgccggctcgtcgtg 963
||||||||||| || || ||||||||||||||||||||||| | ||||||| ||||||||
Sbjct: 187 tacgccttcttcaggagtccgttgcggcgcttgcagaaggtgagctgccggttcgtcgtg 128
Query: 964 ttctcgatgcgcttgatctcgatcttgcctctcccc 999
|||||||||||||||||||||||| | |||||||||
Sbjct: 127 ttctcgatgcgcttgatctcgatcctccctctcccc 92
Score = 48.1 bits (24), Expect = 7e-004
Identities = 63/76 (82%)
Strand = Plus / Minus
Query: 515 tctgcagatccatctcccttttttgcatatagtcaacttcagcgtatagcagctcattct 574
||||||| ||||| |||||| | ||||| || |||| ||||||| ||| | |||||||
Sbjct: 573 tctgcagctccatttcccttctctgcatgtactcaatttcagcgcttagtaattcattct 514
Query: 575 ttctagctctaatctt 590
|||| |||||||||||
Sbjct: 513 ttcttgctctaatctt 498
>gb|BU975486.1|BU975486 HB31F02r BC Hordeum vulgare subsp. vulgare cDNA clone HB31F02
5-PRIME, mRNA sequence
Length = 501
Score = 295 bits (149), Expect = 2e-078
Identities = 227/253 (89%)
Strand = Plus / Minus
Query: 724 tcctgctggtagtactgggcattgacttctgcaactgtgccagagttggaggagtcactg 783
||||||||||||| ||||||||||| ||||| ||||| |||| | |||||| ||||||
Sbjct: 263 tcctgctggtagtgctgggcattgatctctgcgactgtaccagcgctggaggtgtcacta 204
Query: 784 ttggccttcttgtacctctcaatggtggacttcacactgttgttggcgtactcgtagagg 843
| ||||||||||| ||||||||||| | ||| || |||||||||| |||||| ||||||
Sbjct: 203 gttgccttcttgtatctctcaatggttgccttgacgctgttgttggagtactcatagagg 144
Query: 844 cggccgcggctggagaagacgacgagcgcgacctcggcgtcgcagagcaccgagagctcg 903
|| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 143 cgcccgcggctggaaaagacgacgagcgcgacctcagcgtcgcagagcaccgagagctcg 84
Query: 904 tacgccttcttgagcaggccgttgcggcgcttgcagaaggtcacctgccggctcgtcgtg 963
||||||||||| || || ||||||||||||||||||||||| ||||||||| ||||||||
Sbjct: 83 tacgccttcttcaggagtccgttgcggcgcttgcagaaggtgacctgccggttcgtcgtg 24
Query: 964 ttctcgatgcgct 976
|||||||||||||
Sbjct: 23 ttctcgatgcgct 11
Score = 48.1 bits (24), Expect = 7e-004
Identities = 63/76 (82%)
Strand = Plus / Minus
Query: 515 tctgcagatccatctcccttttttgcatatagtcaacttcagcgtatagcagctcattct 574
||||||| ||||| |||||| | ||||| || |||| ||||||| ||| | |||||||
Sbjct: 469 tctgcagctccatttcccttctctgcatgtactcaatttcagcgcttagtaattcattct 410
Query: 575 ttctagctctaatctt 590
|||| |||||||||||
Sbjct: 409 ttcttgctctaatctt 394
>gb|BI948755.1|BI948755 HVSMEl0010L12f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0010L12f, mRNA sequence
Length = 854
Score = 293 bits (148), Expect = 7e-078
Identities = 244/276 (88%)
Strand = Plus / Minus
Query: 724 tcctgctggtagtactgggcattgacttctgcaactgtgccagagttggaggagtcactg 783
||||||||||||| ||||||||||| ||||| ||||| |||| | |||||| ||||||
Sbjct: 415 tcctgctggtagtgctgggcattgatctctgcgactgtaccagcgctggaggtgtcacta 356
Query: 784 ttggccttcttgtacctctcaatggtggacttcacactgttgttggcgtactcgtagagg 843
| ||||||||||| ||||||||||| | ||| || |||||||||| |||||| ||||||
Sbjct: 355 gttgccttcttgtatctctcaatggttgccttgacgctgttgttggagtactcatagagg 296
Query: 844 cggccgcggctggagaagacgacgagcgcgacctcggcgtcgcagagcaccgagagctcg 903
|| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 295 cgcccgcggctggaaaagacgacgagcgcgacctcagcgtcgcagagcaccgagagctcg 236
Query: 904 tacgccttcttgagcaggccgttgcggcgcttgcagaaggtcacctgccggctcgtcgtg 963
||||||||||| || || ||||||||||||||||||||||| ||||||||| ||||||||
Sbjct: 235 tacgccttcttcaggagtccgttgcggcgcttgcagaaggtgacctgccggttcgtcgtg 176
Query: 964 ttctcgatgcgcttgatctcgatcttgcctctcccc 999
||||| | |||| |||||||||| | |||||||||
Sbjct: 175 ttctccacgcgcccgatctcgatcctccctctcccc 140
>gb|CA029142.1|CA029142 HZ64F07r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ64F07
5-PRIME, mRNA sequence
Length = 336
Score = 287 bits (145), Expect = 4e-076
Identities = 196/213 (92%)
Strand = Plus / Minus
Query: 787 gccttcttgtacctctcaatggtggacttcacactgttgttggcgtactcgtagaggcgg 846
||||||||||| ||||||||||| | ||| || |||||||||| |||||| ||||||||
Sbjct: 336 gccttcttgtatctctcaatggttgccttgacgctgttgttggagtactcatagaggcgc 277
Query: 847 ccgcggctggagaagacgacgagcgcgacctcggcgtcgcagagcaccgagagctcgtac 906
||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 276 ccgcggctggaaaagacgacgagcgcgacctcagcgtcgcagagcaccgagagctcgtac 217
Query: 907 gccttcttgagcaggccgttgcggcgcttgcagaaggtcacctgccggctcgtcgtgttc 966
|||||||| || || ||||||||||||||||||||||| ||||||||| |||||||||||
Sbjct: 216 gccttcttcaggagtccgttgcggcgcttgcagaaggtgacctgccggttcgtcgtgttc 157
Query: 967 tcgatgcgcttgatctcgatcttgcctctcccc 999
||||||||||||||||||||| | |||||||||
Sbjct: 156 tcgatgcgcttgatctcgatcctccctctcccc 124
>gb|BG417142.1|BG417142 HVSMEk0016H10f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0016H10f, mRNA sequence
Length = 471
Score = 281 bits (142), Expect = 3e-074
Identities = 245/277 (88%), Gaps = 2/277 (0%)
Strand = Plus / Minus
Query: 724 tcctgctggtagtactgggcattgacttctgcaactgtgccagagttggaggagtcactg 783
||||||||||||| ||||||||||| ||||| |||| |||| | || ||| ||||||
Sbjct: 344 tcctgctggtagtgctgggcattgatctctgcgactgaaccagcgctgnaggtgtcacta 285
Query: 784 ttggccttcttgtacctctcaatggtggacttcaca-ctgttgttggcgtactcgtagag 842
|| |||||||||| ||||||||||| | ||| || |||||||||| |||||| |||||
Sbjct: 284 gtgcccttcttgtatctctcaatggttg-cttaaccgctgttgttggagtactcatagag 226
Query: 843 gcggccgcggctggagaagacgacgagcgcgacctcggcgtcgcagagcaccgagagctc 902
||| ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 225 gcgcccgcggctggaaaagacgacgagcgcgacctcagcgtcgcagagcaccgagagctc 166
Query: 903 gtacgccttcttgagcaggccgttgcggcgcttgcagaaggtcacctgccggctcgtcgt 962
|||||||||||| || || ||||||||||||||||||||||| ||||||||| |||||||
Sbjct: 165 gtacgccttcttcaggagtccgttgcggcgcttgcagaaggtgacctgccggttcgtcgt 106
Query: 963 gttctcgatgcgcttgatctcgatcttgcctctcccc 999
|||||||||||||||||| |||||| | |||||||||
Sbjct: 105 gttctcgatgcgcttgatatcgatcctccctctcccc 69
>gb|BM442374.2|BM442374 EBan01_SQ003_A06_R anther, yellow stage, no treatment, cv Optic,
EBan01 Hordeum vulgare subsp. vulgare cDNA clone
EBan01_SQ003_A06 5', mRNA sequence
Length = 372
Score = 281 bits (142), Expect = 3e-074
Identities = 229/258 (88%)
Strand = Plus / Minus
Query: 742 gcattgacttctgcaactgtgccagagttggaggagtcactgttggccttcttgtacctc 801
||||||| ||||| ||||| |||| | || ||| |||||| | ||||||||||| |||
Sbjct: 372 gcattgatctctgcgactgtaccagcgctgaaggtgtcactagttgccttcttgtatctc 313
Query: 802 tcaatggtggacttcacactgttgttggcgtactcgtagaggcggccgcggctggagaag 861
|||||||| | ||| || |||||||||| |||||| |||||||| ||||||||||| |||
Sbjct: 312 tcaatggttgccttgacgctgttgttggagtactcatagaggcgcccgcggctggaaaag 253
Query: 862 acgacgagcgcgacctcggcgtcgcagagcaccgagagctcgtacgccttcttgagcagg 921
||||||||||||||||| ||||||||||||||||||||||||||||| ||||| || ||
Sbjct: 252 acgacgagcgcgacctcagcgtcgcagagcaccgagagctcgtacgctttcttcaggagt 193
Query: 922 ccgttgcggcgcttgcagaaggtcacctgccggctcgtcgtgttctcgatgcgcttgatc 981
||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 192 ccgttgcggcgcttgcagaaggtgacctgccggttcgtcgtgttctcgatgcgcttgatc 133
Query: 982 tcgatcttgcctctcccc 999
|||||| | |||||||||
Sbjct: 132 tcgatcctccctctcccc 115
>gb|BI948062.1|BI948062 HVSMEl0008A23f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0008A23f, mRNA sequence
Length = 825
Score = 262 bits (132), Expect = 2e-068
Identities = 240/276 (86%)
Strand = Plus / Minus
Query: 724 tcctgctggtagtactgggcattgacttctgcaactgtgccagagttggaggagtcactg 783
||||||||||||| ||||||||||| ||||| ||||| |||| | |||||| ||||||
Sbjct: 390 tcctgctggtagtgctgggcattgatctctgcgactgtaccagcgctggaggtgtcacta 331
Query: 784 ttggccttcttgtacctctcaatggtggacttcacactgttgttggcgtactcgtagagg 843
| ||||||||||| ||||||||||| | ||| || |||||||||| |||||| ||||||
Sbjct: 330 gttgccttcttgtatctctcaatggttgccttgacgctgttgttggagtactcatagagg 271
Query: 844 cggccgcggctggagaagacgacgagcgcgacctcggcgtcgcagagcaccgagagctcg 903
|| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 270 cgcccgcggctggaaaagacgacgagcgcgacctcagcgtcgcagagcaccgagagctcg 211
Query: 904 tacgccttcttgagcaggccgttgcggcgcttgcagaaggtcacctgccggctcgtcgtg 963
||||||||||| || || ||||||||||||| ||||||||| ||||||||| || ||
Sbjct: 210 tacgccttcttcaggagtccgttgcggcgctcgcagaaggtgacctgccggttccccgcc 151
Query: 964 ttctcgatgcgcttgatctcgatcttgcctctcccc 999
| |||||||||||||||||||| | |||||||||
Sbjct: 150 cccccgatgcgcttgatctcgatcctccctctcccc 115
>gb|BM097203.2|BM097203 EBpi07_SQ002_L16_R pistil, 12 DPA, no treatment, cv Optic, EBpi07
Hordeum vulgare subsp. vulgare cDNA clone
EBpi07_SQ002_L16 5', mRNA sequence
Length = 524
Score = 262 bits (132), Expect = 2e-068
Identities = 168/180 (93%)
Strand = Plus / Minus
Query: 820 ctgttgttggcgtactcgtagaggcggccgcggctggagaagacgacgagcgcgacctcg 879
|||||||||| |||||| |||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 517 ctgttgttggagtactcatagaggcgcccgcggctggaaaagacgacgagcgcgacctca 458
Query: 880 gcgtcgcagagcaccgagagctcgtacgccttcttgagcaggccgttgcggcgcttgcag 939
||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||
Sbjct: 457 gcgtcgcagagcaccgagagctcgtacgccttcttcaggagtccgttgcggcgcttgcag 398
Query: 940 aaggtcacctgccggctcgtcgtgttctcgatgcgcttgatctcgatcttgcctctcccc 999
||||| ||||||||| |||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 397 aaggtgacctgccggttcgtcgtgttctcgatgcgcttgatctcgatcctccctctcccc 338
>gb|CA026169.1|CA026169 HZ55C06r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ55C06
5-PRIME, mRNA sequence
Length = 505
Score = 260 bits (131), Expect = 1e-067
Identities = 206/231 (89%)
Strand = Plus / Minus
Query: 724 tcctgctggtagtactgggcattgacttctgcaactgtgccagagttggaggagtcactg 783
||||||||||||| ||||||||||| ||||| ||||| |||| | |||||| ||||||
Sbjct: 245 tcctgctggtagtgctgggcattgatctctgcgactgtaccagcgctggaggtgtcacta 186
Query: 784 ttggccttcttgtacctctcaatggtggacttcacactgttgttggcgtactcgtagagg 843
| ||||||||||| ||||||||||| | ||| || |||||||||| |||||| ||||||
Sbjct: 185 gttgccttcttgtatctctcaatggttgccttgacgctgttgttggagtactcatagagg 126
Query: 844 cggccgcggctggagaagacgacgagcgcgacctcggcgtcgcagagcaccgagagctcg 903
|| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 125 cgcccgcggctggaaaagacgacgagcgcgacctcagcgtcgcagagcaccgagagctcg 66
Query: 904 tacgccttcttgagcaggccgttgcggcgcttgcagaaggtcacctgccgg 954
||||||||||| || || ||||||||||||||||||||||| |||||||||
Sbjct: 65 tacgccttcttcaggagtccgttgcggcgcttgcagaaggtgacctgccgg 15
Score = 48.1 bits (24), Expect = 7e-004
Identities = 63/76 (82%)
Strand = Plus / Minus
Query: 515 tctgcagatccatctcccttttttgcatatagtcaacttcagcgtatagcagctcattct 574
||||||| ||||| |||||| | ||||| || |||| ||||||| ||| | |||||||
Sbjct: 451 tctgcagctccatttcccttctctgcatgtactcaatttcagcgcttagtaattcattct 392
Query: 575 ttctagctctaatctt 590
|||| |||||||||||
Sbjct: 391 ttcttgctctaatctt 376
>gb|BU979781.1|BU979781 HA17E15r HA Hordeum vulgare subsp. vulgare cDNA clone HA17E15
5-PRIME, mRNA sequence
Length = 514
Score = 202 bits (102), Expect = 2e-050
Identities = 165/186 (88%)
Strand = Plus / Minus
Query: 724 tcctgctggtagtactgggcattgacttctgcaactgtgccagagttggaggagtcactg 783
||||||||||||| ||||||||||| ||||| ||||| |||| | |||||| ||||||
Sbjct: 196 tcctgctggtagtgctgggcattgatctctgcgactgtaccagcgctggaggtgtcacta 137
Query: 784 ttggccttcttgtacctctcaatggtggacttcacactgttgttggcgtactcgtagagg 843
| ||||||||||| ||||||||||| | ||| || |||||||||| |||||| ||||||
Sbjct: 136 gttgccttcttgtatctctcaatggttgccttgacgctgttgttggagtactcatagagg 77
Query: 844 cggccgcggctggagaagacgacgagcgcgacctcggcgtcgcagagcaccgagagctcg 903
|| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 76 cgcccgcggctggaaaagacgacgagcgcgacctcagcgtcgcagagcaccgagagctcg 17
Query: 904 tacgcc 909
||||||
Sbjct: 16 tacgcc 11
Score = 48.1 bits (24), Expect = 7e-004
Identities = 63/76 (82%)
Strand = Plus / Minus
Query: 515 tctgcagatccatctcccttttttgcatatagtcaacttcagcgtatagcagctcattct 574
||||||| ||||| |||||| | ||||| || |||| ||||||| ||| | |||||||
Sbjct: 402 tctgcagctccatttcccttctctgcatgtactcaatttcagcgcttagtaattcattct 343
Query: 575 ttctagctctaatctt 590
|||| |||||||||||
Sbjct: 342 ttcttgctctaatctt 327
>gb|BG414778.2|BG414778 HVSMEk0003L01f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0003L01f, mRNA sequence
Length = 601
Score = 194 bits (98), Expect = 5e-048
Identities = 226/262 (86%), Gaps = 5/262 (1%)
Strand = Plus / Minus
Query: 738 ctgggcattgacttctgcaactgtgccagagttggaggagtcactgttggccttcttgta 797
||||||||||| |||||| ||||| |||| || ||||| ||||| ||||| |||||||
Sbjct: 390 ctgggcattgatttctgcgactgt-ccagcgt-ggaggggtcacaagtggccctcttgta 333
Query: 798 cctctcaatggtggacttcacactgttgttggcgtactcgtagaggcggccgcggctgga 857
|| ||||||| | ||| || ||||||||| |||||| || ||||| |||||||||||
Sbjct: 332 tct-tcaatgggtgccttgacgctgttgttga-gtactcataaaggcgcccgcggctgga 275
Query: 858 gaagacgacgagcgcgacctcggcgtcgcagagcaccgagagctcgtacgccttcttgag 917
|||||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||
Sbjct: 274 -aagacgacgagcgcgacctcagcgtcgcagagcaccgagagttcgtacgccttcttcag 216
Query: 918 caggccgttgcggcgcttgcagaaggtcacctgccggctcgtcgtgttctcgatgcgctt 977
|| ||||||||||||||||||||||| || |||||| ||||||||||||||||||| |
Sbjct: 215 gagtccgttgcggcgcttgcagaaggtgacttgccggttcgtcgtgttctcgatgcgtta 156
Query: 978 gatctcgatcttgcctctcccc 999
||| |||||| | |||||||||
Sbjct: 155 gatgtcgatcctccctctcccc 134
>gb|BE193581.2|BE193581 HVSMEh0081M10f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0081M10f, mRNA sequence
Length = 750
Score = 192 bits (97), Expect = 2e-047
Identities = 133/145 (91%)
Strand = Plus / Minus
Query: 833 actcgtagaggcggccgcggctggagaagacgacgagcgcgacctcggcgtcgcagagca 892
||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 281 actcgaagaggcggccgcggctggagaagatgaggagcgcgacctcggcgtcgcagagca 222
Query: 893 ccgagagctcgtacgccttcttgagcaggccgttgcggcgcttgcagaaggtcacctgcc 952
|||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||
Sbjct: 221 ccgacagctcgtacgccttcttgagcagcccgttgcggcgcttggcgaaggtcacctgcc 162
Query: 953 ggctcgtcgtgttctcgatgcgctt 977
|||| || |||| ||||| |||||
Sbjct: 161 ggctgatcttgttgtcgatccgctt 137
>gb|BQ458971.1|BQ458971 HA02K21r HA Hordeum vulgare subsp. vulgare cDNA clone HA02K21
5-PRIME, mRNA sequence
Length = 606
Score = 192 bits (97), Expect = 2e-047
Identities = 172/197 (87%)
Strand = Plus / Minus
Query: 787 gccttcttgtacctctcaatggtggacttcacactgttgttggcgtactcgtagaggcgg 846
|||||||||||||||||||| || | ||| ||||||||||||| |||||| |||||||||
Sbjct: 314 gccttcttgtacctctcaattgtagccttgacactgttgttggagtactcatagaggcgg 255
Query: 847 ccgcggctggagaagacgacgagcgcgacctcggcgtcgcagagcaccgagagctcgtac 906
||||||||||| ||||||| |||||| |||||||||||||| || || |||||||||||
Sbjct: 254 ccgcggctggaaaagacgatgagcgccacctcggcgtcgcacaggacggagagctcgtag 195
Query: 907 gccttcttgagcaggccgttgcggcgcttgcagaaggtcacctgccggctcgtcgtgttc 966
|||||||| | || ||||| ||||||||||||||||||||||| ||||| || || |||
Sbjct: 194 gccttcttcaagagcccgttccggcgcttgcagaaggtcacctggcggctagtggtattc 135
Query: 967 tcgatgcgcttgatctc 983
|| || | |||||||||
Sbjct: 134 tcaatcctcttgatctc 118
>gb|BU979019.1|BU979019 HA14O21r HA Hordeum vulgare subsp. vulgare cDNA clone HA14O21
5-PRIME, mRNA sequence
Length = 633
Score = 192 bits (97), Expect = 2e-047
Identities = 172/197 (87%)
Strand = Plus / Minus
Query: 787 gccttcttgtacctctcaatggtggacttcacactgttgttggcgtactcgtagaggcgg 846
|||||||||||||||||||| || | ||| ||||||||||||| |||||| |||||||||
Sbjct: 285 gccttcttgtacctctcaattgtagccttgacactgttgttggagtactcatagaggcgg 226
Query: 847 ccgcggctggagaagacgacgagcgcgacctcggcgtcgcagagcaccgagagctcgtac 906
||||||||||| ||||||| |||||| |||||||||||||| || || |||||||||||
Sbjct: 225 ccgcggctggaaaagacgatgagcgccacctcggcgtcgcacaggacggagagctcgtag 166
Query: 907 gccttcttgagcaggccgttgcggcgcttgcagaaggtcacctgccggctcgtcgtgttc 966
|||||||| | || ||||| ||||||||||||||||||||||| ||||| || || |||
Sbjct: 165 gccttcttcaagagcccgttccggcgcttgcagaaggtcacctggcggctagtggtattc 106
Query: 967 tcgatgcgcttgatctc 983
|| || | |||||||||
Sbjct: 105 tcaatcctcttgatctc 89
>gb|BU979487.1|BU979487 HA16F04r HA Hordeum vulgare subsp. vulgare cDNA clone HA16F04
5-PRIME, mRNA sequence
Length = 629
Score = 192 bits (97), Expect = 2e-047
Identities = 172/197 (87%)
Strand = Plus / Minus
Query: 787 gccttcttgtacctctcaatggtggacttcacactgttgttggcgtactcgtagaggcgg 846
|||||||||||||||||||| || | ||| ||||||||||||| |||||| |||||||||
Sbjct: 337 gccttcttgtacctctcaattgtagccttgacactgttgttggagtactcatagaggcgg 278
Query: 847 ccgcggctggagaagacgacgagcgcgacctcggcgtcgcagagcaccgagagctcgtac 906
||||||||||| ||||||| |||||| |||||||||||||| || || |||||||||||
Sbjct: 277 ccgcggctggaaaagacgatgagcgccacctcggcgtcgcacaggacggagagctcgtag 218
Query: 907 gccttcttgagcaggccgttgcggcgcttgcagaaggtcacctgccggctcgtcgtgttc 966
|||||||| | || ||||| ||||||||||||||||||||||| ||||| || || |||
Sbjct: 217 gccttcttcaagagcccgttccggcgcttgcagaaggtcacctggcggctagtggtattc 158
Query: 967 tcgatgcgcttgatctc 983
|| || | |||||||||
Sbjct: 157 tcaatcctcttgatctc 141
>gb|CA025113.1|CA025113 HZ51D24r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ51D24
5-PRIME, mRNA sequence
Length = 490
Score = 192 bits (97), Expect = 2e-047
Identities = 172/197 (87%)
Strand = Plus / Minus
Query: 787 gccttcttgtacctctcaatggtggacttcacactgttgttggcgtactcgtagaggcgg 846
|||||||||||||||||||| || | ||| ||||||||||||| |||||| |||||||||
Sbjct: 317 gccttcttgtacctctcaattgtagccttgacactgttgttggagtactcatagaggcgg 258
Query: 847 ccgcggctggagaagacgacgagcgcgacctcggcgtcgcagagcaccgagagctcgtac 906
||||||||||| ||||||| |||||| |||||||||||||| || || |||||||||||
Sbjct: 257 ccgcggctggaaaagacgatgagcgccacctcggcgtcgcacaggacggagagctcgtag 198
Query: 907 gccttcttgagcaggccgttgcggcgcttgcagaaggtcacctgccggctcgtcgtgttc 966
|||||||| | || ||||| ||||||||||||||||||||||| ||||| || || |||
Sbjct: 197 gccttcttcaagagcccgttccggcgcttgcagaaggtcacctggcggctagtggtattc 138
Query: 967 tcgatgcgcttgatctc 983
|| || | |||||||||
Sbjct: 137 tcaatcctcttgatctc 121
>gb|CA021258.1|CA021258 HZ39J06r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ39J06
5-PRIME, mRNA sequence
Length = 607
Score = 184 bits (93), Expect = 5e-045
Identities = 171/197 (86%)
Strand = Plus / Minus
Query: 787 gccttcttgtacctctcaatggtggacttcacactgttgttggcgtactcgtagaggcgg 846
|||||||||||||||||||| || | ||| ||||||||||||| |||||| |||||||||
Sbjct: 282 gccttcttgtacctctcaattgtagccttgacactgttgttggagtactcatagaggcgg 223
Query: 847 ccgcggctggagaagacgacgagcgcgacctcggcgtcgcagagcaccgagagctcgtac 906
||||||||||| ||||||| |||||| |||||||||||||| || || ||||||||||
Sbjct: 222 ccgcggctggaaaagacgatgagcgccacctcggcgtcgcacaggacgtagagctcgtag 163
Query: 907 gccttcttgagcaggccgttgcggcgcttgcagaaggtcacctgccggctcgtcgtgttc 966
|||||||| | || ||||| ||||||||||||||||||||||| ||||| || || |||
Sbjct: 162 gccttcttcaagagcccgttccggcgcttgcagaaggtcacctggcggctagtggtattc 103
Query: 967 tcgatgcgcttgatctc 983
|| || | |||||||||
Sbjct: 102 tcaatcctcttgatctc 86
>gb|BQ470743.1|BQ470743 HX03O10r HX Hordeum vulgare subsp. vulgare cDNA clone HX03O10
5-PRIME, mRNA sequence
Length = 627
Score = 168 bits (85), Expect = 3e-040
Identities = 139/157 (88%)
Strand = Plus / Minus
Query: 827 tggcgtactcgtagaggcggccgcggctggagaagacgacgagcgcgacctcggcgtcgc 886
||||| |||||||||| | |||||| |||||||||||||||| |||||||||||||||
Sbjct: 357 tggcgaactcgtagagcctgccgcgaggggagaagacgacgagcccgacctcggcgtcgc 298
Query: 887 agagcaccgagagctcgtacgccttcttgagcaggccgttgcggcgcttgcagaaggtca 946
||||||||||||||||| | |||||||||||||| ||||| | ||||||| |||||||||
Sbjct: 297 agagcaccgagagctcgaaggccttcttgagcagcccgttcctgcgcttggagaaggtca 238
Query: 947 cctgccggctcgtcgtgttctcgatgcgcttgatctc 983
||||||||||||| | |||||| || ||||| |||||
Sbjct: 237 cctgccggctcgtggcgttctctatccgcttcatctc 201
>gb|CK124663.1|CK124663 BES1824109o14 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010O149 5-PRIME, mRNA sequence
Length = 778
Score = 168 bits (85), Expect = 3e-040
Identities = 130/145 (89%)
Strand = Plus / Minus
Query: 833 actcgtagaggcggccgcggctggagaagacgacgagcgcgacctcggcgtcgcagagca 892
|||||||||| ||||||||||||||||| || |||||| |||||||||||||||||||
Sbjct: 158 actcgtagagcttgccgcggctggagaagatgatgagcgccacctcggcgtcgcagagca 99
Query: 893 ccgagagctcgtacgccttcttgagcaggccgttgcggcgcttgcagaaggtcacctgcc 952
| ||||||||||| ||||||||||| |||||||||||||||||| ||||||| |||||||
Sbjct: 98 cggagagctcgtaggccttcttgaggaggccgttgcggcgcttggagaaggtgacctgcc 39
Query: 953 ggctcgtcgtgttctcgatgcgctt 977
|| | || ||||||||||||||||
Sbjct: 38 ggttgatcttgttctcgatgcgctt 14
>gb|AY541067.1| Hordeum vulgare subsp. vulgare AGAMOUS LIKE6-like protein mRNA,
complete cds
Length = 1464
Score = 168 bits (85), Expect = 3e-040
Identities = 130/145 (89%)
Strand = Plus / Minus
Query: 833 actcgtagaggcggccgcggctggagaagacgacgagcgcgacctcggcgtcgcagagca 892
|||||||||| ||||||||||||||||| || |||||| |||||||||||||||||||
Sbjct: 555 actcgtagagcttgccgcggctggagaagatgatgagcgccacctcggcgtcgcagagca 496
Query: 893 ccgagagctcgtacgccttcttgagcaggccgttgcggcgcttgcagaaggtcacctgcc 952
| ||||||||||| ||||||||||| |||||||||||||||||| ||||||| |||||||
Sbjct: 495 cggagagctcgtaggccttcttgaggaggccgttgcggcgcttggagaaggtgacctgcc 436
Query: 953 ggctcgtcgtgttctcgatgcgctt 977
|| | || ||||||||||||||||
Sbjct: 435 ggttgatcttgttctcgatgcgctt 411
>gb|BU982429.1|BU982429 HA26I11r HA Hordeum vulgare subsp. vulgare cDNA clone HA26I11
5-PRIME, mRNA sequence
Length = 584
Score = 167 bits (84), Expect = 1e-039
Identities = 138/156 (88%)
Strand = Plus / Minus
Query: 832 tactcgtagaggcggccgcggctggagaagacgacgagcgcgacctcggcgtcgcagagc 891
||||||||||||||||||||| ||||||||||| | |||| |||||| ||||||||
Sbjct: 272 tactcgtagaggcggccgcgggcggagaagacgatcaaggcgatctcggcttcgcagagg 213
Query: 892 accgagagctcgtacgccttcttgagcaggccgttgcggcgcttgcagaaggtcacctgc 951
|| ||||||||||| |||||||||||||| ||||| | |||||||||||||||||| ||
Sbjct: 212 acggagagctcgtaggccttcttgagcagcccgttcctgcgcttgcagaaggtcacttgg 153
Query: 952 cggctcgtcgtgttctcgatgcgcttgatctcgatc 987
|||||||||||||||||||| | |||||||||||||
Sbjct: 152 cggctcgtcgtgttctcgatcctcttgatctcgatc 117
>gb|BE456120.2|BE456120 HVSMEg0019N18f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0019N18f, mRNA sequence
Length = 872
Score = 165 bits (83), Expect = 4e-039
Identities = 125/139 (89%)
Strand = Plus / Minus
Query: 833 actcgtagaggcggccgcggctggagaagacgacgagcgcgacctcggcgtcgcagagca 892
||||| ||||||||||||||| |||||||| || ||| ||||||||||||||||||||||
Sbjct: 174 actcgaagaggcggccgcggccggagaagatgatgagggcgacctcggcgtcgcagagca 115
Query: 893 ccgagagctcgtacgccttcttgagcaggccgttgcggcgcttgcagaaggtcacctgcc 952
|||||||||||| |||||||||||||| ||||| ||||||||| ||||||||||||||
Sbjct: 114 gcgagagctcgtaggccttcttgagcagcccgttccggcgcttggcgaaggtcacctgcc 55
Query: 953 ggctcgtcgtgttctcgat 971
|||| || ||||||||||
Sbjct: 54 ggcttatcttgttctcgat 36
>gb|BU984647.1|BU984647 HF04I23r HF Hordeum vulgare subsp. vulgare cDNA clone HF04I23
5-PRIME, mRNA sequence
Length = 649
Score = 165 bits (83), Expect = 4e-039
Identities = 128/143 (89%)
Strand = Plus / Minus
Query: 833 actcgtagaggcggccgcggctggagaagacgacgagcgcgacctcggcgtcgcagagca 892
|||||||||| ||||||||||||||||| || |||||| |||||||||||||||||||
Sbjct: 152 actcgtagagcttgccgcggctggagaagatgatgagcgccacctcggcgtcgcagagca 93
Query: 893 ccgagagctcgtacgccttcttgagcaggccgttgcggcgcttgcagaaggtcacctgcc 952
| ||||||||||| ||||||||||| |||||||||||||||||| ||||||| |||||||
Sbjct: 92 cggagagctcgtaggccttcttgaggaggccgttgcggcgcttggagaaggtgacctgcc 33
Query: 953 ggctcgtcgtgttctcgatgcgc 975
|| | || ||||||||||||||
Sbjct: 32 ggttgatcttgttctcgatgcgc 10
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 161,823
Number of Sequences: 312970
Number of extensions: 161823
Number of successful extensions: 51904
Number of sequences better than 0.5: 233
Number of HSP's better than 0.5 without gapping: 232
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 51566
Number of HSP's gapped (non-prelim): 323
length of query: 1245
length of database: 175,134,539
effective HSP length: 19
effective length of query: 1226
effective length of database: 169,188,109
effective search space: 207424621634
effective search space used: 207424621634
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)