BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3748516.2.1
(1155 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BQ765573.1|BQ765573 EBro03_SQ007_F17_R root, 3 week, wat... 274 6e-072
gb|BF622288.3|BF622288 HVSMEa0002I16f Hordeum vulgare seedl... 252 2e-065
gb|AL507275.1|AL507275 AL507275 Hordeum vulgare Barke devel... 204 5e-051
gb|BI956518.1|BI956518 HVSMEn0003O09f Hordeum vulgare rachi... 204 5e-051
gb|BI957183.1|BI957183 HVSMEn0007P24f Hordeum vulgare rachi... 204 5e-051
gb|BI958784.1|BI958784 HVSMEn0016J13f Hordeum vulgare rachi... 204 5e-051
gb|BI959138.1|BI959138 HVSMEn0018F10f Hordeum vulgare rachi... 204 5e-051
gb|BI959353.1|BI959353 HVSMEn0019F12f Hordeum vulgare rachi... 204 5e-051
gb|BI959378.1|BI959378 HVSMEn0019H04f Hordeum vulgare rachi... 204 5e-051
gb|BI959654.1|BI959654 HVSMEn0020K03f Hordeum vulgare rachi... 204 5e-051
gb|BI959698.1|BI959698 HVSMEn0020N13f Hordeum vulgare rachi... 204 5e-051
gb|BI959771.1|BI959771 HVSMEn0021G03f Hordeum vulgare rachi... 204 5e-051
gb|BI960458.1|BI960458 HVSMEn0024K16f Hordeum vulgare rachi... 204 5e-051
gb|BE196421.3|BE196421 HVSMEh0092D24f Hordeum vulgare 5-45 ... 204 5e-051
gb|BE603113.3|BE603113 HVSMEh0101P24f Hordeum vulgare 5-45 ... 204 5e-051
gb|BG365461.2|BG365461 HVSMEi0002M09f Hordeum vulgare 20 DA... 204 5e-051
gb|BG369408.2|BG369408 HVSMEi0024E17f Hordeum vulgare 20 DA... 204 5e-051
gb|BQ469285.1|BQ469285 HM03P13r HM Hordeum vulgare subsp. v... 204 5e-051
gb|BQ758707.1|BQ758707 EBma07_SQ002_G16_R maternal, 21 DPA,... 204 5e-051
gb|BU993991.1|BU993991 HM05E17r HM Hordeum vulgare subsp. v... 204 5e-051
gb|BU995090.1|BU995090 HM09C23r HM Hordeum vulgare subsp. v... 204 5e-051
gb|CA022206.1|CA022206 HZ42H09r HZ Hordeum vulgare subsp. v... 204 5e-051
gb|CK122095.1|CK122095 BES1824101g21 BES1824 Hordeum vulgar... 204 5e-051
gb|BF628930.2|BF628930 HVSMEb0009C23f Hordeum vulgare seedl... 198 3e-049
gb|BI957226.1|BI957226 HVSMEn0008D17f Hordeum vulgare rachi... 196 1e-048
gb|BI958795.1|BI958795 HVSMEn0016K11f Hordeum vulgare rachi... 196 1e-048
gb|BI959720.1|BI959720 HVSMEn0020P05f Hordeum vulgare rachi... 196 1e-048
gb|BI954215.1|BI954215 HVSMEm0016K09f Hordeum vulgare green... 190 7e-047
gb|BI957603.1|BI957603 HVSMEn0010F11f Hordeum vulgare rachi... 188 3e-046
gb|BF260026.3|BF260026 HVSMEf0020O13f Hordeum vulgare seedl... 182 2e-044
gb|AV928430.1|AV928430 AV928430 K. Sato unpublished cDNA li... 170 7e-041
gb|CW512145.1|CW512145 ToNAR_Morex_118b Morex Exon trapped ... 168 3e-040
gb|AV923254.1|AV923254 AV923254 K. Sato unpublished cDNA li... 168 3e-040
gb|CA022237.1|CA022237 HZ42I19r HZ Hordeum vulgare subsp. v... 168 3e-040
gb|BI956772.1|BI956772 HVSMEn0005E06f Hordeum vulgare rachi... 167 1e-039
gb|BM372935.2|BM372935 EBma04_SQ002_H04_R maternal, 10 DPA,... 165 4e-039
gb|CA023986.1|CA023986 HZ48A15r HZ Hordeum vulgare subsp. v... 165 4e-039
gb|CB882163.1|CB882163 HL01B01w HL Hordeum vulgare subsp. v... 165 4e-039
gb|CK125696.1|CK125696 BES1824110b08 BES1824 Hordeum vulgar... 165 4e-039
gb|BQ767787.1|BQ767787 EBro08_SQ009_H22_R root, 3 week, dro... 161 6e-038
gb|BI956468.1|BI956468 HVSMEn0003I18f Hordeum vulgare rachi... 159 2e-037
gb|BG310251.1|BG310251 HVSMEc0016K12f Hordeum vulgare seedl... 157 1e-036
gb|BI957582.1|BI957582 HVSMEn0010D14f Hordeum vulgare rachi... 157 1e-036
gb|BI960089.1|BI960089 HVSMEn0023C15f Hordeum vulgare rachi... 157 1e-036
gb|BI959812.1|BI959812 HVSMEn0021L03f Hordeum vulgare rachi... 151 6e-035
gb|BQ760850.1|BQ760850 EBro03_SQ003_K11_R root, 3 week, wat... 151 6e-035
gb|BF618493.2|BF618493 HVSMEc0005N13f Hordeum vulgare seedl... 149 2e-034
gb|BI959328.1|BI959328 HVSMEn0019E09f Hordeum vulgare rachi... 149 2e-034
gb|CV054003.1|CV054003 BNEL105f8 Barley EST endosperm libra... 145 4e-033
gb|CV054400.1|CV054400 BNEL10B12 Barley EST endosperm libra... 145 4e-033
gb|CV060611.1|CV060611 BNEL5B4 Barley EST endosperm library... 145 4e-033
gb|CV061225.1|CV061225 BNEL66d10 Barley EST endosperm libra... 145 4e-033
gb|CV063217.1|CV063217 BNEL87h3 Barley EST endosperm librar... 145 4e-033
gb|CV063456.1|CV063456 BNEL8E2 Barley EST endosperm library... 145 4e-033
gb|AL504600.1|AL504600 AL504600 Hordeum vulgare Barke roots... 137 9e-031
gb|CA004554.1|CA004554 HS17P08r HS Hordeum vulgare subsp. v... 135 4e-030
gb|CA004842.1|CA004842 HS18N14r HS Hordeum vulgare subsp. v... 135 4e-030
gb|BI956858.1|BI956858 HVSMEn0005K24f Hordeum vulgare rachi... 133 1e-029
gb|BQ764067.1|BQ764067 EBro03_SQ006_N05_R root, 3 week, wat... 133 1e-029
gb|CV063939.1|CV063939 BNEL94h5 Barley EST endosperm librar... 133 1e-029
gb|BI949344.1|BI949344 HVSMEl0013G22f Hordeum vulgare spike... 129 2e-028
gb|BQ458429.1|BQ458429 HA05E07r HA Hordeum vulgare subsp. v... 129 2e-028
gb|BU981055.1|BU981055 HA22I03r HA Hordeum vulgare subsp. v... 129 2e-028
gb|BU981754.1|BU981754 HA24I17r HA Hordeum vulgare subsp. v... 129 2e-028
gb|BQ467895.1|BQ467895 HR01E04r HR Hordeum vulgare subsp. v... 127 9e-028
gb|BM097618.2|BM097618 EBem04_SQ002_D15_R embryo, 12 DPA, n... 127 9e-028
gb|BI957249.1|BI957249 HVSMEn0008G13f Hordeum vulgare rachi... 125 3e-027
gb|CV060955.1|CV060955 BNEL63c5 Barley EST endosperm librar... 123 1e-026
gb|BE421427.1|BE421427 HWM009.B12 ITEC HWM Barley Leaf Libr... 117 8e-025
gb|BF256653.2|BF256653 HVSMEf0010J19f Hordeum vulgare seedl... 117 8e-025
gb|BF257516.2|BF257516 HVSMEf0013C01f Hordeum vulgare seedl... 117 8e-025
gb|BF259343.2|BF259343 HVSMEf0019F11f Hordeum vulgare seedl... 117 8e-025
gb|BI960393.1|BI960393 HVSMEn0024H07f Hordeum vulgare rachi... 117 8e-025
gb|BJ453165.1|BJ453165 BJ453165 K. Sato unpublished cDNA li... 117 8e-025
gb|BJ460714.1|BJ460714 BJ460714 K. Sato unpublished cDNA li... 117 8e-025
gb|BU967134.1|BU967134 HB03G05r BC Hordeum vulgare subsp. v... 117 8e-025
gb|BU978694.1|BU978694 HA14A06r HA Hordeum vulgare subsp. v... 117 8e-025
gb|BU980194.1|BU980194 HA18P06r HA Hordeum vulgare subsp. v... 117 8e-025
gb|CA001233.1|CA001233 HS18N14u HS Hordeum vulgare subsp. v... 117 8e-025
gb|CA019796.1|CA019796 HV13D05r HV Hordeum vulgare subsp. v... 117 8e-025
gb|CA019997.1|CA019997 HV14A15r HV Hordeum vulgare subsp. v... 117 8e-025
gb|CA031744.1|CA031744 HX11A03r HX Hordeum vulgare subsp. v... 117 8e-025
gb|CB882255.1|CB882255 HL01F14w HL Hordeum vulgare subsp. v... 117 8e-025
gb|CK122737.1|CK122737 BES1824105j22 BES1824 Hordeum vulgar... 117 8e-025
gb|CK123980.1|CK123980 BES1824106f16 BES1824 Hordeum vulgar... 117 8e-025
gb|CA001449.1|CA001449 HS17P08u HS Hordeum vulgare subsp. v... 115 3e-024
gb|CB883447.1|CB883447 HQ02E17w HQ Hordeum vulgare subsp. v... 113 1e-023
gb|CA018998.1|CA018998 HV10G08r HV Hordeum vulgare subsp. v... 111 5e-023
gb|BQ662029.1|BQ662029 HR01E04u HR Hordeum vulgare subsp. v... 109 2e-022
gb|BU981183.1|BU981183 HA22N23r HA Hordeum vulgare subsp. v... 109 2e-022
gb|CV061235.1|CV061235 BNEL66d9 Barley EST endosperm librar... 109 2e-022
gb|CV054086.1|CV054086 BNEL106e9 Barley EST endosperm libra... 105 3e-021
gb|BQ767806.1|BQ767806 EBro08_SQ009_L19_R root, 3 week, dro... 101 5e-020
gb|CK122346.1|CK122346 BES1824102p12 BES1824 Hordeum vulgar... 96 3e-018
gb|BF625170.3|BF625170 HVSMEa0006D08f Hordeum vulgare seedl... 94 1e-017
gb|BE454367.2|BE454367 HVSMEh0093N18f Hordeum vulgare 5-45 ... 94 1e-017
gb|BQ465138.1|BQ465138 HU02M06r HU Hordeum vulgare subsp. v... 92 5e-017
gb|BQ661556.1|BQ661556 HM03P13u HM Hordeum vulgare subsp. v... 92 5e-017
gb|BM097179.2|BM097179 EBpi07_SQ002_K14_R pistil, 12 DPA, n... 92 5e-017
gb|BQ759881.1|BQ759881 EBpi05_SQ004_P16_R pistil, 8 DPA, no... 92 5e-017
gb|BU968145.1|BU968145 HB06J03r BC Hordeum vulgare subsp. v... 92 5e-017
gb|BU984183.1|BU984183 HF03D17r HF Hordeum vulgare subsp. v... 92 5e-017
gb|BU986289.1|BU986289 HF11E17r HF Hordeum vulgare subsp. v... 92 5e-017
gb|CB880652.1|CB880652 HM07E17w HM Hordeum vulgare subsp. v... 92 5e-017
gb|CB881234.1|CB881234 HM09C23w HM Hordeum vulgare subsp. v... 92 5e-017
gb|BF254126.2|BF254126 HVSMEf0003B13f Hordeum vulgare seedl... 88 8e-016
gb|AV917139.1|AV917139 AV917139 K. Sato unpublished cDNA li... 88 8e-016
gb|CK124612.1|CK124612 BES1824109m10 BES1824 Hordeum vulgar... 88 8e-016
gb|CA018598.1|CA018598 HV09B16r HV Hordeum vulgare subsp. v... 82 5e-014
gb|CA019031.1|CA019031 HV10I11r HV Hordeum vulgare subsp. v... 80 2e-013
gb|BE060246.3|BE060246 HVSMEg0011L08f Hordeum vulgare pre-a... 78 7e-013
gb|BU983094.1|BU983094 HA28I14r HA Hordeum vulgare subsp. v... 78 7e-013
gb|CA019202.1|CA019202 HV11D04r HV Hordeum vulgare subsp. v... 78 7e-013
gb|CB882446.1|CB882446 HL01O04w HL Hordeum vulgare subsp. v... 78 7e-013
gb|BG308983.2|BG308983 HVSMEc0001E03f Hordeum vulgare seedl... 76 3e-012
gb|BF253787.2|BF253787 HVSMEf0002C01f Hordeum vulgare seedl... 74 1e-011
gb|BF626539.2|BF626539 HVSMEa0018K23f Hordeum vulgare seedl... 72 4e-011
gb|BQ470849.1|BQ470849 HX04D14r HX Hordeum vulgare subsp. v... 72 4e-011
gb|BQ665573.1|BQ665573 HX04D14u HX Hordeum vulgare subsp. v... 72 4e-011
gb|BG300504.2|BG300504 HVSMEb0017E15f Hordeum vulgare seedl... 70 2e-010
gb|AV917082.1|AV917082 AV917082 K. Sato unpublished cDNA li... 68 7e-010
gb|CA017602.1|CA017602 HV05K21r HV Hordeum vulgare subsp. v... 64 1e-008
gb|BQ468475.1|BQ468475 HM01F21T HM Hordeum vulgare subsp. v... 62 4e-008
gb|BQ469137.1|BQ469137 HM03I08r HM Hordeum vulgare subsp. v... 62 4e-008
gb|CB883976.1|CB883976 HM06N05r HM Hordeum vulgare subsp. v... 62 4e-008
gb|CB884030.1|CB884030 HM10H05r HM Hordeum vulgare subsp. v... 62 4e-008
gb|CB884040.1|CB884040 HM11B07r HM Hordeum vulgare subsp. v... 62 4e-008
gb|CB884057.1|CB884057 HM12C11r HM Hordeum vulgare subsp. v... 62 4e-008
gb|CA002220.1|CA002220 HS06N20r HS Hordeum vulgare subsp. v... 60 2e-007
gb|CV058074.1|CV058074 BNEL34a7 Barley EST endosperm librar... 60 2e-007
gb|BF254343.3|BF254343 HVSMEf0003L07f Hordeum vulgare seedl... 58 7e-007
gb|CV055940.1|CV055940 BNEL12B5 Barley EST endosperm librar... 58 7e-007
gb|BG299356.2|BG299356 HVSMEa0019J09f Hordeum vulgare seedl... 54 1e-005
gb|BG416780.1|BG416780 HVSMEk0014H23f Hordeum vulgare testa... 54 1e-005
gb|BI958420.1|BI958420 HVSMEn0014O10f Hordeum vulgare rachi... 54 1e-005
gb|BF260322.3|BF260322 HVSMEf0021L02f Hordeum vulgare seedl... 54 1e-005
gb|BJ467335.1|BJ467335 BJ467335 K. Sato unpublished cDNA li... 54 1e-005
gb|BQ459628.1|BQ459628 HA08J01r HA Hordeum vulgare subsp. v... 54 1e-005
gb|BQ661443.1|BQ661443 HM03I08u HM Hordeum vulgare subsp. v... 54 1e-005
gb|BM372620.2|BM372620 EBpi05_SQ003_H14_R pistil, 8 DPA, no... 54 1e-005
gb|BQ767036.1|BQ767036 EBro08_SQ007_G24_R root, 3 week, dro... 54 1e-005
gb|CB881625.1|CB881625 HM10G06w HM Hordeum vulgare subsp. v... 54 1e-005
gb|CK124171.1|CK124171 BES1824107e17 BES1824 Hordeum vulgar... 54 1e-005
gb|BG368652.1|BG368652 HVSMEi0020B24f Hordeum vulgare 20 DA... 52 4e-005
gb|BE193443.3|BE193443 HVSMEh0081A10f Hordeum vulgare 5-45 ... 52 4e-005
gb|BG368109.2|BG368109 HVSMEi0015L12f Hordeum vulgare 20 DA... 52 4e-005
gb|BG368126.2|BG368126 HVSMEi0015M21f Hordeum vulgare 20 DA... 52 4e-005
gb|BG369116.2|BG369116 HVSMEi0021M10f Hordeum vulgare 20 DA... 52 4e-005
gb|BG369955.2|BG369955 HVSMEi0026K23f Hordeum vulgare 20 DA... 52 4e-005
gb|AJ436682.1|AJ436682 AJ436682 S00002 Hordeum vulgare subs... 52 4e-005
gb|AJ463502.1|AJ463502 AJ463502 S00002 Hordeum vulgare subs... 52 4e-005
gb|BQ459308.1|BQ459308 HA01I15r HA Hordeum vulgare subsp. v... 52 4e-005
gb|BM098205.2|BM098205 EBpi03_SQ002_N14_R pistil, 4 DPA, no... 52 4e-005
gb|BU980984.1|BU980984 HA22E18r HA Hordeum vulgare subsp. v... 52 4e-005
gb|BE193294.3|BE193294 HVSMEh0080H17f Hordeum vulgare 5-45 ... 50 2e-004
gb|BG367014.2|BG367014 HVSMEi0009N03f Hordeum vulgare 20 DA... 50 2e-004
gb|BG367966.2|BG367966 HVSMEi0015B12f Hordeum vulgare 20 DA... 50 2e-004
gb|BG368897.2|BG368897 HVSMEi0021D09f Hordeum vulgare 20 DA... 50 2e-004
gb|BQ764220.1|BQ764220 EBan01_SQ005_P04_R anther, yellow st... 48 7e-004
gb|BQ764421.1|BQ764421 EBan01_SQ005_G21_R anther, yellow st... 48 7e-004
gb|BU995044.1|BU995044 HM09A07r HM Hordeum vulgare subsp. v... 48 7e-004
gb|BJ458363.1|BJ458363 BJ458363 K. Sato unpublished cDNA li... 46 0.003
gb|CB880524.1|CB880524 HM06N05w HM Hordeum vulgare subsp. v... 46 0.003
gb|AL509792.1|AL509792 AL509792 Hordeum vulgare Barke devel... 44 0.010
gb|BQ762389.1|BQ762389 EBro01_SQ005_N17 _R root, 3 week, hy... 44 0.010
gb|BU978858.1|BU978858 HA14H15r HA Hordeum vulgare subsp. v... 44 0.010
gb|BF627653.2|BF627653 HVSMEb0005H01f Hordeum vulgare seedl... 42 0.040
gb|BG365226.2|BG365226 HVSMEi0001O04f Hordeum vulgare 20 DA... 42 0.040
gb|BG367556.2|BG367556 HVSMEi0012K22f Hordeum vulgare 20 DA... 42 0.040
gb|BQ658207.1|BQ658207 HA05E07u HA Hordeum vulgare subsp. v... 42 0.040
gb|BQ753409.1|BQ753409 EBan01_SQ004_D03_R anther, yellow st... 42 0.040
gb|BQ753618.1|BQ753618 EBan01_SQ004_M07_R anther, yellow st... 42 0.040
gb|BE230894.2|BE230894 HVSMEg0001I02f Hordeum vulgare pre-a... 40 0.16
>gb|BQ765573.1|BQ765573 EBro03_SQ007_F17_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ007_F17 5', mRNA sequence
Length = 620
Score = 274 bits (138), Expect = 6e-072
Identities = 356/426 (83%), Gaps = 2/426 (0%)
Strand = Plus / Minus
Query: 501 gggttggagccgtgctggacgcggaaggtgatggtcaggcccgggaagttgcacggcacc 560
|||||||||||| |||||||| ||||||||| ||| ||||||||||||||| |||||
Sbjct: 617 gggttggagccgcgctggacgtggaaggtgaccttcatgcccgggaagttgcagcgcacc 558
Query: 561 cgcc-tgaactgcatgtcgatgatcccggcgtgccggagcttgtcgttcaggccccagct 619
| || ||||||||||||||||||| |||||||| |||||||||||||| ||||| | |
Sbjct: 557 ctccctgaactgcatgtcgatgatgccggcgtggcggagcttgtcgttgaggccgtactt 498
Query: 620 ggccatggacccgaacgccgtgccgctcaggtcgaagtggtacttggccaccgggtagta 679
|||||||| ||||||||| ||||| || ||||||||||||||| ||||||| ||||||||
Sbjct: 497 ggccatggccccgaacgcggtgcc-ctgaggtcgaagtggtacctggccacggggtagta 439
Query: 680 gttcatgtccgtgatgatcaccgtctgagccacgccggagcaggccgggtggttgctctt 739
||||||||| ||||| | ||||||| | | | ||||||||||| |||| ||||
Sbjct: 438 gttcatgtcggtgatcaccaccgtccgcggctggccggagcaggaagggttgttggcggc 379
Query: 740 caggcaccgtatctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgtt 799
|| ||| || |||| ||||||||||||||| || |||| | | ||||| ||||||||
Sbjct: 378 cacgcatcggatctcgtagcatgagccgcagccggcgccgccgtcgaagagaggctcgtt 319
Query: 800 gccacaggacgtcatggacgagaacgggtactggttggtgcccttgaacccgcacgcacc 859
||| ||||| |||||||| ||||| ||||||| ||| | |||||| ||||| |||||
Sbjct: 318 gccgcaggaggtcatggaggagaaggggtacttgttcacgttcttgaagccgcaagcacc 259
Query: 860 accgttgtcgacggggccggcgccggtgggggcgccgtaccaggtggccttggccggcag 919
|||||||| | ||||||||||||||||||||| |||||||||||||||||||| || ||
Sbjct: 258 gccgttgtccatggggccggcgccggtgggggcaccgtaccaggtggccttggcggggag 199
Query: 920 ccagcc 925
||||||
Sbjct: 198 ccagcc 193
>gb|BF622288.3|BF622288 HVSMEa0002I16f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0002I16f, mRNA sequence
Length = 851
Score = 252 bits (127), Expect = 2e-065
Identities = 394/483 (81%)
Strand = Plus / Minus
Query: 431 ctgcatgatgtccgcctgcaccacgtcgccgtccttgttctcgtgctcgatgagcacggc 490
|||||| |||||| |||| ||||||||||||| |||||||| ||| | || | |||
Sbjct: 529 ctgcatcatgtccacctggtccacgtcgccgtcgccgttctcgtactccaccaggatggc 470
Query: 491 caggtacatggggttggagccgtgctggacgcggaaggtgatggtcaggcccgggaagtt 550
|||||| ||||||||| |||||||| ||| |||| || | ||||| |||||| | |
Sbjct: 469 caggtagtaggggttggaaccgtgctgcacgtggaacgtcaccgtcagccccgggtactg 410
Query: 551 gcacggcacccgcctgaactgcatgtcgatgatcccggcgtgccggagcttgtcgttcag 610
||||||||||| |||||||||||||||||||| |||||||||||||||| ||||| |
Sbjct: 409 gcacggcacccttctgaactgcatgtcgatgatgccggcgtgccggagctcttcgttgcg 350
Query: 611 gccccagctggccatggacccgaacgccgtgccgctcaggtcgaagtggtacttggccac 670
||| ||||||||| ||||| || |||||||| |||||||||||| | || |||
Sbjct: 349 gccgtccttggccatggcgccgaaggcggtgccgctgaggtcgaagtggaagcgggacac 290
Query: 671 cgggtagtagttcatgtccgtgatgatcaccgtctgagccacgccggagcaggccgggtg 730
||||||||||||||||||||||||||||||||||| | |||||||||||| ||||||||
Sbjct: 289 cgggtagtagttcatgtccgtgatgatcaccgtctccggcacgccggagcacgccgggtg 230
Query: 731 gttgctcttcaggcaccgtatctggtagcatgagccgcaacccttgccgtccttgaagat 790
| | || |||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct: 229 gcccgccgacacgcaccgtatctggtagcaggagccgcagcccttgccgtccttgaagag 170
Query: 791 gggctcgttgccacaggacgtcatggacgagaacgggtactggttggtgcccttgaaccc 850
||||||||||| ||||| ||||||| ||||| || | ||||| | |||||||||
Sbjct: 169 cggctcgttgccgcaggaggtcatggcggagaagggtggcaggttgacgttcttgaaccc 110
Query: 851 gcacgcaccaccgttgtcgacggggccggcgccggtgggggcgccgtaccaggtggcctt 910
||| || || ||||||||| | || |||||||| |||| |||||||||||||| ||| |
Sbjct: 109 gcaggcgccgccgttgtcgtctggcccggcgccattgggcgcgccgtaccaggtcgccct 50
Query: 911 ggc 913
|||
Sbjct: 49 ggc 47
Score = 63.9 bits (32), Expect = 1e-008
Identities = 83/100 (83%)
Strand = Plus / Minus
Query: 316 tgccggactcgttggtgatgcgcatggagaaggggccacggagcgggcggttggggtcga 375
|||||||||||||||||||||||| ||||||||||| | | ||||| | ||| |
Sbjct: 680 tgccggactcgttggtgatgcgcagcgagaaggggccctgcatggggcgccgtgtgtcca 621
Query: 376 tcctccagatggagccccaggactcgtgcatgggctccca 415
||| |||||||||||||||||||||| ||||||| ||||
Sbjct: 620 tccgccagatggagccccaggactcggtcatgggcaccca 581
>gb|AL507275.1|AL507275 AL507275 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY01J07V 5',
mRNA sequence
Length = 549
Score = 204 bits (103), Expect = 5e-051
Identities = 154/171 (90%)
Strand = Plus / Minus
Query: 743 gcaccgtatctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgcc 802
|||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||
Sbjct: 330 gcaccgtatctggtagcaggagccgcatcccttgccatccttgaagatgggctcgttgcc 271
Query: 803 acaggacgtcatggacgagaacgggtactggttggtgcccttgaacccgcacgcaccacc 862
|| || |||||||| ||||| ||||||||||||||| |||||||||||||||||||||
Sbjct: 270 gcacgatgtcatggaggagaaggggtactggttggtgttcttgaacccgcacgcaccacc 211
Query: 863 gttgtcgacggggccggcgccggtgggggcgccgtaccaggtggccttggc 913
|| ||| | ||||||||| || ||||| |||||||||||||||||| ||||
Sbjct: 210 gtcgtccatggggccggcacccgtgggcgcgccgtaccaggtggccctggc 160
Score = 135 bits (68), Expect = 4e-030
Identities = 135/156 (86%), Gaps = 1/156 (0%)
Strand = Plus / Minus
Query: 551 gcacggcacccgcctgaactgcatgtcgatgatcccggcgtgccggagcttgtcg-ttca 609
||||||||| | | ||||||| ||||||||||| |||| |||||||||||| ||| || |
Sbjct: 517 gcacggcactctcttgaactggatgtcgatgatgccggagtgccggagcttctcgcttga 458
Query: 610 ggccccagctggccatggacccgaacgccgtgccgctcaggtcgaagtggtacttggcca 669
|||| ||||||||| |||||||| ||||| ||||||||||||||||||||||| |
Sbjct: 457 ggccgggcttggccatggcgccgaacgcggtgccactcaggtcgaagtggtacttggcaa 398
Query: 670 ccgggtagtagttcatgtccgtgatgatcaccgtct 705
||||||||||||||||||| ||||||| ||||||||
Sbjct: 397 ccgggtagtagttcatgtcggtgatgaccaccgtct 362
>gb|BI956518.1|BI956518 HVSMEn0003O09f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0003O09f, mRNA sequence
Length = 443
Score = 204 bits (103), Expect = 5e-051
Identities = 154/171 (90%)
Strand = Plus / Minus
Query: 743 gcaccgtatctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgcc 802
|||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||
Sbjct: 340 gcaccgtatctggtagcaggagccgcatcccttgccatccttgaagatgggctcgttgcc 281
Query: 803 acaggacgtcatggacgagaacgggtactggttggtgcccttgaacccgcacgcaccacc 862
|| || |||||||| ||||| ||||||||||||||| |||||||||||||||||||||
Sbjct: 280 gcacgatgtcatggaggagaaggggtactggttggtgttcttgaacccgcacgcaccacc 221
Query: 863 gttgtcgacggggccggcgccggtgggggcgccgtaccaggtggccttggc 913
|| ||| | ||||||||| || ||||| |||||||||||||||||| ||||
Sbjct: 220 gtcgtccatggggccggcacccgtgggcgcgccgtaccaggtggccctggc 170
Score = 103 bits (52), Expect = 1e-020
Identities = 67/72 (93%)
Strand = Plus / Minus
Query: 634 acgccgtgccgctcaggtcgaagtggtacttggccaccgggtagtagttcatgtccgtga 693
|||| ||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 443 acgcggtgccactcaggtcgaagtggtacttggcaaccgggtagtagttcatgtcggtga 384
Query: 694 tgatcaccgtct 705
||| ||||||||
Sbjct: 383 tgaccaccgtct 372
>gb|BI957183.1|BI957183 HVSMEn0007P24f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0007P24f, mRNA sequence
Length = 844
Score = 204 bits (103), Expect = 5e-051
Identities = 154/171 (90%)
Strand = Plus / Minus
Query: 743 gcaccgtatctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgcc 802
|||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||
Sbjct: 372 gcaccgtatctggtagcaggagccgcatcccttgccatccttgaagatgggctcgttgcc 313
Query: 803 acaggacgtcatggacgagaacgggtactggttggtgcccttgaacccgcacgcaccacc 862
|| || |||||||| ||||| ||||||||||||||| |||||||||||||||||||||
Sbjct: 312 gcacgatgtcatggaggagaaggggtactggttggtgttcttgaacccgcacgcaccacc 253
Query: 863 gttgtcgacggggccggcgccggtgggggcgccgtaccaggtggccttggc 913
|| ||| | ||||||||| || ||||| |||||||||||||||||| ||||
Sbjct: 252 gtcgtccatggggccggcacccgtgggcgcgccgtaccaggtggccctggc 202
Score = 117 bits (59), Expect = 8e-025
Identities = 80/87 (91%)
Strand = Plus / Minus
Query: 619 tggccatggacccgaacgccgtgccgctcaggtcgaagtggtacttggccaccgggtagt 678
||||||||| |||||||| ||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 490 tggccatggcgccgaacgcggtgccactcaggtcgaagtggtacttggcaaccgggtagt 431
Query: 679 agttcatgtccgtgatgatcaccgtct 705
|||||||||| ||||||| ||||||||
Sbjct: 430 agttcatgtcggtgatgaccaccgtct 404
>gb|BI958784.1|BI958784 HVSMEn0016J13f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0016J13f, mRNA sequence
Length = 656
Score = 204 bits (103), Expect = 5e-051
Identities = 154/171 (90%)
Strand = Plus / Minus
Query: 743 gcaccgtatctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgcc 802
|||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||
Sbjct: 359 gcaccgtatctggtagcaggagccgcatcccttgccatccttgaagatgggctcgttgcc 300
Query: 803 acaggacgtcatggacgagaacgggtactggttggtgcccttgaacccgcacgcaccacc 862
|| || |||||||| ||||| ||||||||||||||| |||||||||||||||||||||
Sbjct: 299 gcacgatgtcatggaggagaaggggtactggttggtgttcttgaacccgcacgcaccacc 240
Query: 863 gttgtcgacggggccggcgccggtgggggcgccgtaccaggtggccttggc 913
|| ||| | ||||||||| || ||||| |||||||||||||||||| ||||
Sbjct: 239 gtcgtccatggggccggcacccgtgggcgcgccgtaccaggtggccctggc 189
Score = 141 bits (71), Expect = 6e-032
Identities = 134/155 (86%)
Strand = Plus / Minus
Query: 551 gcacggcacccgcctgaactgcatgtcgatgatcccggcgtgccggagcttgtcgttcag 610
||||||||| | | ||||||| ||||||||||| |||| |||||||||||| ||| | ||
Sbjct: 545 gcacggcactctcttgaactggatgtcgatgatgccggagtgccggagcttctcgctgag 486
Query: 611 gccccagctggccatggacccgaacgccgtgccgctcaggtcgaagtggtacttggccac 670
||| ||||||||| |||||||| ||||| ||||||||||||||||||||||| ||
Sbjct: 485 gccgggcttggccatggcgccgaacgcggtgccactcaggtcgaagtggtacttggcaac 426
Query: 671 cgggtagtagttcatgtccgtgatgatcaccgtct 705
|||||||||||||||||| ||||||| ||||||||
Sbjct: 425 cgggtagtagttcatgtcggtgatgaccaccgtct 391
>gb|BI959138.1|BI959138 HVSMEn0018F10f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0018F10f, mRNA sequence
Length = 669
Score = 204 bits (103), Expect = 5e-051
Identities = 154/171 (90%)
Strand = Plus / Minus
Query: 743 gcaccgtatctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgcc 802
|||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||
Sbjct: 263 gcaccgtatctggtagcaggagccgcatcccttgccatccttgaagatgggctcgttgcc 204
Query: 803 acaggacgtcatggacgagaacgggtactggttggtgcccttgaacccgcacgcaccacc 862
|| || |||||||| ||||| ||||||||||||||| |||||||||||||||||||||
Sbjct: 203 gcacgatgtcatggaggagaaggggtactggttggtgttcttgaacccgcacgcaccacc 144
Query: 863 gttgtcgacggggccggcgccggtgggggcgccgtaccaggtggccttggc 913
|| ||| | ||||||||| || ||||| |||||||||||||||||| ||||
Sbjct: 143 gtcgtccatggggccggcacccgtgggcgcgccgtaccaggtggccctggc 93
Score = 141 bits (71), Expect = 6e-032
Identities = 134/155 (86%)
Strand = Plus / Minus
Query: 551 gcacggcacccgcctgaactgcatgtcgatgatcccggcgtgccggagcttgtcgttcag 610
||||||||| | | ||||||| ||||||||||| |||| |||||||||||| ||| | ||
Sbjct: 449 gcacggcactctcttgaactggatgtcgatgatgccggagtgccggagcttctcgctgag 390
Query: 611 gccccagctggccatggacccgaacgccgtgccgctcaggtcgaagtggtacttggccac 670
||| ||||||||| |||||||| ||||| ||||||||||||||||||||||| ||
Sbjct: 389 gccgggcttggccatggcgccgaacgcggtgccactcaggtcgaagtggtacttggcaac 330
Query: 671 cgggtagtagttcatgtccgtgatgatcaccgtct 705
|||||||||||||||||| ||||||| ||||||||
Sbjct: 329 cgggtagtagttcatgtcggtgatgaccaccgtct 295
>gb|BI959353.1|BI959353 HVSMEn0019F12f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0019F12f, mRNA sequence
Length = 669
Score = 204 bits (103), Expect = 5e-051
Identities = 154/171 (90%)
Strand = Plus / Minus
Query: 743 gcaccgtatctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgcc 802
|||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||
Sbjct: 373 gcaccgtatctggtagcaggagccgcatcccttgccatccttgaagatgggctcgttgcc 314
Query: 803 acaggacgtcatggacgagaacgggtactggttggtgcccttgaacccgcacgcaccacc 862
|| || |||||||| ||||| ||||||||||||||| |||||||||||||||||||||
Sbjct: 313 gcacgatgtcatggaggagaaggggtactggttggtgttcttgaacccgcacgcaccacc 254
Query: 863 gttgtcgacggggccggcgccggtgggggcgccgtaccaggtggccttggc 913
|| ||| | ||||||||| || ||||| |||||||||||||||||| ||||
Sbjct: 253 gtcgtccatggggccggcacccgtgggcgcgccgtaccaggtggccctggc 203
Score = 141 bits (71), Expect = 6e-032
Identities = 134/155 (86%)
Strand = Plus / Minus
Query: 551 gcacggcacccgcctgaactgcatgtcgatgatcccggcgtgccggagcttgtcgttcag 610
||||||||| | | ||||||| ||||||||||| |||| |||||||||||| ||| | ||
Sbjct: 559 gcacggcactctcttgaactggatgtcgatgatgccggagtgccggagcttctcgctgag 500
Query: 611 gccccagctggccatggacccgaacgccgtgccgctcaggtcgaagtggtacttggccac 670
||| ||||||||| |||||||| ||||| ||||||||||||||||||||||| ||
Sbjct: 499 gccgggcttggccatggcgccgaacgcggtgccactcaggtcgaagtggtacttggcaac 440
Query: 671 cgggtagtagttcatgtccgtgatgatcaccgtct 705
|||||||||||||||||| ||||||| ||||||||
Sbjct: 439 cgggtagtagttcatgtcggtgatgaccaccgtct 405
>gb|BI959378.1|BI959378 HVSMEn0019H04f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0019H04f, mRNA sequence
Length = 663
Score = 204 bits (103), Expect = 5e-051
Identities = 154/171 (90%)
Strand = Plus / Minus
Query: 743 gcaccgtatctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgcc 802
|||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||
Sbjct: 371 gcaccgtatctggtagcaggagccgcatcccttgccatccttgaagatgggctcgttgcc 312
Query: 803 acaggacgtcatggacgagaacgggtactggttggtgcccttgaacccgcacgcaccacc 862
|| || |||||||| ||||| ||||||||||||||| |||||||||||||||||||||
Sbjct: 311 gcacgatgtcatggaggagaaggggtactggttggtgttcttgaacccgcacgcaccacc 252
Query: 863 gttgtcgacggggccggcgccggtgggggcgccgtaccaggtggccttggc 913
|| ||| | ||||||||| || ||||| |||||||||||||||||| ||||
Sbjct: 251 gtcgtccatggggccggcacccgtgggcgcgccgtaccaggtggccctggc 201
Score = 119 bits (60), Expect = 2e-025
Identities = 134/156 (85%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 551 gcacggcacccgcctgaactgcatgtcgatgatcccggcgtgccggagcttgtcgttcag 610
||||||||| | | |||| || ||||||||||| | || |||||||||||| ||| | ||
Sbjct: 557 gcacggcactctcttgaattggatgtcgatgatgcgggagtgccggagcttctcgctgag 498
Query: 611 gccccagct-ggccatggacccgaacgccgtgccgctcaggtcgaagtggtacttggcca 669
||| ||| |||||||| |||||||| ||||| ||||||||||||||||||||||| |
Sbjct: 497 -cccgggcttggccatggcgccgaacgcggtgccactcaggtcgaagtggtacttggcaa 439
Query: 670 ccgggtagtagttcatgtccgtgatgatcaccgtct 705
||||||||||||||||||| ||||||| ||||||||
Sbjct: 438 ccgggtagtagttcatgtcggtgatgaccaccgtct 403
>gb|BI959654.1|BI959654 HVSMEn0020K03f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0020K03f, mRNA sequence
Length = 679
Score = 204 bits (103), Expect = 5e-051
Identities = 154/171 (90%)
Strand = Plus / Minus
Query: 743 gcaccgtatctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgcc 802
|||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||
Sbjct: 367 gcaccgtatctggtagcaggagccgcatcccttgccatccttgaagatgggctcgttgcc 308
Query: 803 acaggacgtcatggacgagaacgggtactggttggtgcccttgaacccgcacgcaccacc 862
|| || |||||||| ||||| ||||||||||||||| |||||||||||||||||||||
Sbjct: 307 gcacgatgtcatggaggagaaggggtactggttggtgttcttgaacccgcacgcaccacc 248
Query: 863 gttgtcgacggggccggcgccggtgggggcgccgtaccaggtggccttggc 913
|| ||| | ||||||||| || ||||| |||||||||||||||||| ||||
Sbjct: 247 gtcgtccatggggccggcacccgtgggcgcgccgtaccaggtggccctggc 197
Score = 133 bits (67), Expect = 1e-029
Identities = 133/155 (85%)
Strand = Plus / Minus
Query: 551 gcacggcacccgcctgaactgcatgtcgatgatcccggcgtgccggagcttgtcgttcag 610
||||||||| | | ||||||| ||||||||||| |||| |||| ||||||| ||| | ||
Sbjct: 553 gcacggcactctcttgaactggatgtcgatgatgccggagtgcgggagcttctcgctgag 494
Query: 611 gccccagctggccatggacccgaacgccgtgccgctcaggtcgaagtggtacttggccac 670
||| ||||||||| |||||||| ||||| ||||||||||||||||||||||| ||
Sbjct: 493 gccgggcttggccatggcgccgaacgcggtgccactcaggtcgaagtggtacttggcaac 434
Query: 671 cgggtagtagttcatgtccgtgatgatcaccgtct 705
|||||||||||||||||| ||||||| ||||||||
Sbjct: 433 cgggtagtagttcatgtcggtgatgaccaccgtct 399
>gb|BI959698.1|BI959698 HVSMEn0020N13f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0020N13f, mRNA sequence
Length = 630
Score = 204 bits (103), Expect = 5e-051
Identities = 154/171 (90%)
Strand = Plus / Minus
Query: 743 gcaccgtatctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgcc 802
|||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||
Sbjct: 368 gcaccgtatctggtagcaggagccgcatcccttgccatccttgaagatgggctcgttgcc 309
Query: 803 acaggacgtcatggacgagaacgggtactggttggtgcccttgaacccgcacgcaccacc 862
|| || |||||||| ||||| ||||||||||||||| |||||||||||||||||||||
Sbjct: 308 gcacgatgtcatggaggagaaggggtactggttggtgttcttgaacccgcacgcaccacc 249
Query: 863 gttgtcgacggggccggcgccggtgggggcgccgtaccaggtggccttggc 913
|| ||| | ||||||||| || ||||| |||||||||||||||||| ||||
Sbjct: 248 gtcgtccatggggccggcacccgtgggcgcgccgtaccaggtggccctggc 198
Score = 141 bits (71), Expect = 6e-032
Identities = 134/155 (86%)
Strand = Plus / Minus
Query: 551 gcacggcacccgcctgaactgcatgtcgatgatcccggcgtgccggagcttgtcgttcag 610
||||||||| | | ||||||| ||||||||||| |||| |||||||||||| ||| | ||
Sbjct: 554 gcacggcactctcttgaactggatgtcgatgatgccggagtgccggagcttctcgctgag 495
Query: 611 gccccagctggccatggacccgaacgccgtgccgctcaggtcgaagtggtacttggccac 670
||| ||||||||| |||||||| ||||| ||||||||||||||||||||||| ||
Sbjct: 494 gccgggcttggccatggcgccgaacgcggtgccactcaggtcgaagtggtacttggcaac 435
Query: 671 cgggtagtagttcatgtccgtgatgatcaccgtct 705
|||||||||||||||||| ||||||| ||||||||
Sbjct: 434 cgggtagtagttcatgtcggtgatgaccaccgtct 400
>gb|BI959771.1|BI959771 HVSMEn0021G03f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0021G03f, mRNA sequence
Length = 682
Score = 204 bits (103), Expect = 5e-051
Identities = 154/171 (90%)
Strand = Plus / Minus
Query: 743 gcaccgtatctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgcc 802
|||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||
Sbjct: 350 gcaccgtatctggtagcaggagccgcatcccttgccatccttgaagatgggctcgttgcc 291
Query: 803 acaggacgtcatggacgagaacgggtactggttggtgcccttgaacccgcacgcaccacc 862
|| || |||||||| ||||| ||||||||||||||| |||||||||||||||||||||
Sbjct: 290 gcacgatgtcatggaggagaaggggtactggttggtgttcttgaacccgcacgcaccacc 231
Query: 863 gttgtcgacggggccggcgccggtgggggcgccgtaccaggtggccttggc 913
|| ||| | ||||||||| || ||||| |||||||||||||||||| ||||
Sbjct: 230 gtcgtccatggggccggcacccgtgggcgcgccgtaccaggtggccctggc 180
Score = 141 bits (71), Expect = 6e-032
Identities = 134/155 (86%)
Strand = Plus / Minus
Query: 551 gcacggcacccgcctgaactgcatgtcgatgatcccggcgtgccggagcttgtcgttcag 610
||||||||| | | ||||||| ||||||||||| |||| |||||||||||| ||| | ||
Sbjct: 536 gcacggcactctcttgaactggatgtcgatgatgccggagtgccggagcttctcgctgag 477
Query: 611 gccccagctggccatggacccgaacgccgtgccgctcaggtcgaagtggtacttggccac 670
||| ||||||||| |||||||| ||||| ||||||||||||||||||||||| ||
Sbjct: 476 gccgggcttggccatggcgccgaacgcggtgccactcaggtcgaagtggtacttggcaac 417
Query: 671 cgggtagtagttcatgtccgtgatgatcaccgtct 705
|||||||||||||||||| ||||||| ||||||||
Sbjct: 416 cgggtagtagttcatgtcggtgatgaccaccgtct 382
>gb|BI960458.1|BI960458 HVSMEn0024K16f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0024K16f, mRNA sequence
Length = 677
Score = 204 bits (103), Expect = 5e-051
Identities = 154/171 (90%)
Strand = Plus / Minus
Query: 743 gcaccgtatctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgcc 802
|||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||
Sbjct: 373 gcaccgtatctggtagcaggagccgcatcccttgccatccttgaagatgggctcgttgcc 314
Query: 803 acaggacgtcatggacgagaacgggtactggttggtgcccttgaacccgcacgcaccacc 862
|| || |||||||| ||||| ||||||||||||||| |||||||||||||||||||||
Sbjct: 313 gcacgatgtcatggaggagaaggggtactggttggtgttcttgaacccgcacgcaccacc 254
Query: 863 gttgtcgacggggccggcgccggtgggggcgccgtaccaggtggccttggc 913
|| ||| | ||||||||| || ||||| |||||||||||||||||| ||||
Sbjct: 253 gtcgtccatggggccggcacccgtgggcgcgccgtaccaggtggccctggc 203
Score = 141 bits (71), Expect = 6e-032
Identities = 134/155 (86%)
Strand = Plus / Minus
Query: 551 gcacggcacccgcctgaactgcatgtcgatgatcccggcgtgccggagcttgtcgttcag 610
||||||||| | | ||||||| ||||||||||| |||| |||||||||||| ||| | ||
Sbjct: 559 gcacggcactctcttgaactggatgtcgatgatgccggagtgccggagcttctcgctgag 500
Query: 611 gccccagctggccatggacccgaacgccgtgccgctcaggtcgaagtggtacttggccac 670
||| ||||||||| |||||||| ||||| ||||||||||||||||||||||| ||
Sbjct: 499 gccgggcttggccatggcgccgaacgcggtgccactcaggtcgaagtggtacttggcaac 440
Query: 671 cgggtagtagttcatgtccgtgatgatcaccgtct 705
|||||||||||||||||| ||||||| ||||||||
Sbjct: 439 cgggtagtagttcatgtcggtgatgaccaccgtct 405
>gb|BE196421.3|BE196421 HVSMEh0092D24f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0092D24f, mRNA sequence
Length = 901
Score = 204 bits (103), Expect = 5e-051
Identities = 154/171 (90%)
Strand = Plus / Minus
Query: 743 gcaccgtatctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgcc 802
|||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||
Sbjct: 285 gcaccgtatctggtagcaggagccgcatcccttgccatccttgaagatgggctcgttgcc 226
Query: 803 acaggacgtcatggacgagaacgggtactggttggtgcccttgaacccgcacgcaccacc 862
|| || |||||||| ||||| ||||||||||||||| |||||||||||||||||||||
Sbjct: 225 gcacgatgtcatggaggagaaggggtactggttggtgttcttgaacccgcacgcaccacc 166
Query: 863 gttgtcgacggggccggcgccggtgggggcgccgtaccaggtggccttggc 913
|| ||| | ||||||||| || ||||| |||||||||||||||||| ||||
Sbjct: 165 gtcgtccatggggccggcacccgtgggcgcgccgtaccaggtggccctggc 115
Score = 141 bits (71), Expect = 6e-032
Identities = 134/155 (86%)
Strand = Plus / Minus
Query: 551 gcacggcacccgcctgaactgcatgtcgatgatcccggcgtgccggagcttgtcgttcag 610
||||||||| | | ||||||| ||||||||||| |||| |||||||||||| ||| | ||
Sbjct: 471 gcacggcactctcttgaactggatgtcgatgatgccggagtgccggagcttctcgctgag 412
Query: 611 gccccagctggccatggacccgaacgccgtgccgctcaggtcgaagtggtacttggccac 670
||| ||||||||| |||||||| ||||| ||||||||||||||||||||||| ||
Sbjct: 411 gccgggcttggccatggcgccgaacgcggtgccactcaggtcgaagtggtacttggcaac 352
Query: 671 cgggtagtagttcatgtccgtgatgatcaccgtct 705
|||||||||||||||||| ||||||| ||||||||
Sbjct: 351 cgggtagtagttcatgtcggtgatgaccaccgtct 317
>gb|BE603113.3|BE603113 HVSMEh0101P24f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0101P24f, mRNA sequence
Length = 515
Score = 204 bits (103), Expect = 5e-051
Identities = 154/171 (90%)
Strand = Plus / Minus
Query: 743 gcaccgtatctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgcc 802
|||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||
Sbjct: 371 gcaccgtatctggtagcaggagccgcatcccttgccatccttgaagatgggctcgttgcc 312
Query: 803 acaggacgtcatggacgagaacgggtactggttggtgcccttgaacccgcacgcaccacc 862
|| || |||||||| ||||| ||||||||||||||| |||||||||||||||||||||
Sbjct: 311 gcacgatgtcatggaggagaaggggtactggttggtgttcttgaacccgcacgcaccacc 252
Query: 863 gttgtcgacggggccggcgccggtgggggcgccgtaccaggtggccttggc 913
|| ||| | ||||||||| || ||||| |||||||||||||||||| ||||
Sbjct: 251 gtcgtccatggggccggcacccgtgggcgcgccgtaccaggtggccctggc 201
Score = 117 bits (59), Expect = 8e-025
Identities = 80/87 (91%)
Strand = Plus / Minus
Query: 619 tggccatggacccgaacgccgtgccgctcaggtcgaagtggtacttggccaccgggtagt 678
||||||||| |||||||| ||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 489 tggccatggcgccgaacgcggtgccactcaggtcgaagtggtacttggcaaccgggtagt 430
Query: 679 agttcatgtccgtgatgatcaccgtct 705
|||||||||| ||||||| ||||||||
Sbjct: 429 agttcatgtcggtgatgaccaccgtct 403
>gb|BG365461.2|BG365461 HVSMEi0002M09f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0002M09f, mRNA sequence
Length = 754
Score = 204 bits (103), Expect = 5e-051
Identities = 154/171 (90%)
Strand = Plus / Minus
Query: 743 gcaccgtatctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgcc 802
|||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||
Sbjct: 371 gcaccgtatctggtagcaggagccgcatcccttgccatccttgaagatgggctcgttgcc 312
Query: 803 acaggacgtcatggacgagaacgggtactggttggtgcccttgaacccgcacgcaccacc 862
|| || |||||||| ||||| ||||||||||||||| |||||||||||||||||||||
Sbjct: 311 gcacgatgtcatggaggagaaggggtactggttggtgttcttgaacccgcacgcaccacc 252
Query: 863 gttgtcgacggggccggcgccggtgggggcgccgtaccaggtggccttggc 913
|| ||| | ||||||||| || ||||| |||||||||||||||||| ||||
Sbjct: 251 gtcgtccatggggccggcacccgtgggcgcgccgtaccaggtggccctggc 201
Score = 141 bits (71), Expect = 6e-032
Identities = 134/155 (86%)
Strand = Plus / Minus
Query: 551 gcacggcacccgcctgaactgcatgtcgatgatcccggcgtgccggagcttgtcgttcag 610
||||||||| | | ||||||| ||||||||||| |||| |||||||||||| ||| | ||
Sbjct: 557 gcacggcactctcttgaactggatgtcgatgatgccggagtgccggagcttctcgctgag 498
Query: 611 gccccagctggccatggacccgaacgccgtgccgctcaggtcgaagtggtacttggccac 670
||| ||||||||| |||||||| ||||| ||||||||||||||||||||||| ||
Sbjct: 497 gccgggcttggccatggcgccgaacgcggtgccactcaggtcgaagtggtacttggcaac 438
Query: 671 cgggtagtagttcatgtccgtgatgatcaccgtct 705
|||||||||||||||||| ||||||| ||||||||
Sbjct: 437 cgggtagtagttcatgtcggtgatgaccaccgtct 403
>gb|BG369408.2|BG369408 HVSMEi0024E17f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0024E17f, mRNA sequence
Length = 875
Score = 204 bits (103), Expect = 5e-051
Identities = 154/171 (90%)
Strand = Plus / Minus
Query: 743 gcaccgtatctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgcc 802
|||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||
Sbjct: 359 gcaccgtatctggtagcaggagccgcatcccttgccatccttgaagatgggctcgttgcc 300
Query: 803 acaggacgtcatggacgagaacgggtactggttggtgcccttgaacccgcacgcaccacc 862
|| || |||||||| ||||| ||||||||||||||| |||||||||||||||||||||
Sbjct: 299 gcacgatgtcatggaggagaaggggtactggttggtgttcttgaacccgcacgcaccacc 240
Query: 863 gttgtcgacggggccggcgccggtgggggcgccgtaccaggtggccttggc 913
|| ||| | ||||||||| || ||||| |||||||||||||||||| ||||
Sbjct: 239 gtcgtccatggggccggcacccgtgggcgcgccgtaccaggtggccctggc 189
Score = 141 bits (71), Expect = 6e-032
Identities = 134/155 (86%)
Strand = Plus / Minus
Query: 551 gcacggcacccgcctgaactgcatgtcgatgatcccggcgtgccggagcttgtcgttcag 610
||||||||| | | ||||||| ||||||||||| |||| |||||||||||| ||| | ||
Sbjct: 545 gcacggcactctcttgaactggatgtcgatgatgccggagtgccggagcttctcgctgag 486
Query: 611 gccccagctggccatggacccgaacgccgtgccgctcaggtcgaagtggtacttggccac 670
||| ||||||||| |||||||| ||||| ||||||||||||||||||||||| ||
Sbjct: 485 gccgggcttggccatggcgccgaacgcggtgccactcaggtcgaagtggtacttggcaac 426
Query: 671 cgggtagtagttcatgtccgtgatgatcaccgtct 705
|||||||||||||||||| ||||||| ||||||||
Sbjct: 425 cgggtagtagttcatgtcggtgatgaccaccgtct 391
>gb|BQ469285.1|BQ469285 HM03P13r HM Hordeum vulgare subsp. vulgare cDNA clone HM03P13
5-PRIME, mRNA sequence
Length = 480
Score = 204 bits (103), Expect = 5e-051
Identities = 154/171 (90%)
Strand = Plus / Minus
Query: 743 gcaccgtatctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgcc 802
|||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||
Sbjct: 369 gcaccgtatctggtagcaggagccgcatcccttgccatccttgaagatgggctcgttgcc 310
Query: 803 acaggacgtcatggacgagaacgggtactggttggtgcccttgaacccgcacgcaccacc 862
|| || |||||||| ||||| ||||||||||||||| |||||||||||||||||||||
Sbjct: 309 gcacgatgtcatggaggagaaggggtactggttggtgttcttgaacccgcacgcaccacc 250
Query: 863 gttgtcgacggggccggcgccggtgggggcgccgtaccaggtggccttggc 913
|| ||| | ||||||||| || ||||| |||||||||||||||||| ||||
Sbjct: 249 gtcgtccatggggccggcacccgtgggcgcgccgtaccaggtggccctggc 199
Score = 111 bits (56), Expect = 5e-023
Identities = 71/76 (93%)
Strand = Plus / Minus
Query: 630 ccgaacgccgtgccgctcaggtcgaagtggtacttggccaccgggtagtagttcatgtcc 689
|||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 476 ccgaacgcggtgccactcaggtcgaagtggtacttggcaaccgggtagtagttcatgtcg 417
Query: 690 gtgatgatcaccgtct 705
||||||| ||||||||
Sbjct: 416 gtgatgaccaccgtct 401
>gb|BQ758707.1|BQ758707 EBma07_SQ002_G16_R maternal, 21 DPA, no treatment, cv Optic, EBma07
Hordeum vulgare subsp. vulgare cDNA clone
EBma07_SQ002_G16 5', mRNA sequence
Length = 521
Score = 204 bits (103), Expect = 5e-051
Identities = 154/171 (90%)
Strand = Plus / Minus
Query: 743 gcaccgtatctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgcc 802
|||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||
Sbjct: 353 gcaccgtatctggtagcaggagccgcatcccttgccatccttgaagatgggctcgttgcc 294
Query: 803 acaggacgtcatggacgagaacgggtactggttggtgcccttgaacccgcacgcaccacc 862
|| || |||||||| ||||| ||||||||||||||| |||||||||||||||||||||
Sbjct: 293 gcacgatgtcatggaggagaaggggtactggttggtgttcttgaacccgcacgcaccacc 234
Query: 863 gttgtcgacggggccggcgccggtgggggcgccgtaccaggtggccttggc 913
|| ||| | ||||||||| || ||||| |||||||||||||||||| ||||
Sbjct: 233 gtcgtccatggggccggcacccgtgggcgcgccgtaccaggtggccctggc 183
Score = 129 bits (65), Expect = 2e-028
Identities = 116/133 (87%)
Strand = Plus / Minus
Query: 573 atgtcgatgatcccggcgtgccggagcttgtcgttcaggccccagctggccatggacccg 632
||||||||||| |||| |||||||||||| ||| | ||||| ||||||||| |||
Sbjct: 517 atgtcgatgatgccggagtgccggagcttctcgctgaggccgggcttggccatggcgccg 458
Query: 633 aacgccgtgccgctcaggtcgaagtggtacttggccaccgggtagtagttcatgtccgtg 692
||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||| |||
Sbjct: 457 aacgcggtgccactcaggtcgaagtggtacttggcaaccgggtagtagttcatgtcggtg 398
Query: 693 atgatcaccgtct 705
|||| ||||||||
Sbjct: 397 atgaccaccgtct 385
>gb|BU993991.1|BU993991 HM05E17r HM Hordeum vulgare subsp. vulgare cDNA clone HM05E17
5-PRIME, mRNA sequence
Length = 560
Score = 204 bits (103), Expect = 5e-051
Identities = 154/171 (90%)
Strand = Plus / Minus
Query: 743 gcaccgtatctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgcc 802
|||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||
Sbjct: 384 gcaccgtatctggtagcaggagccgcatcccttgccatccttgaagatgggctcgttgcc 325
Query: 803 acaggacgtcatggacgagaacgggtactggttggtgcccttgaacccgcacgcaccacc 862
|| || |||||||| ||||| ||||||||||||||| |||||||||||||||||||||
Sbjct: 324 gcacgatgtcatggaggagaaggggtactggttggtgttcttgaacccgcacgcaccacc 265
Query: 863 gttgtcgacggggccggcgccggtgggggcgccgtaccaggtggccttggc 913
|| ||| | ||||||||| || ||||| |||||||||||||||||| ||||
Sbjct: 264 gtcgtccatggggccggcacccgtgggcgcgccgtaccaggtggccctggc 214
Score = 137 bits (69), Expect = 9e-031
Identities = 123/141 (87%)
Strand = Plus / Minus
Query: 565 tgaactgcatgtcgatgatcccggcgtgccggagcttgtcgttcaggccccagctggcca 624
||||||| ||||||||||| |||| |||||||||||| ||| | ||||| ||||||
Sbjct: 556 tgaactggatgtcgatgatgccggagtgccggagcttctcgctgaggccgggcttggcca 497
Query: 625 tggacccgaacgccgtgccgctcaggtcgaagtggtacttggccaccgggtagtagttca 684
||| |||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 496 tggcgccgaacgcggtgccactcaggtcgaagtggtacttggcaaccgggtagtagttca 437
Query: 685 tgtccgtgatgatcaccgtct 705
|||| ||||||| ||||||||
Sbjct: 436 tgtcggtgatgaccaccgtct 416
>gb|BU995090.1|BU995090 HM09C23r HM Hordeum vulgare subsp. vulgare cDNA clone HM09C23
5-PRIME, mRNA sequence
Length = 653
Score = 204 bits (103), Expect = 5e-051
Identities = 154/171 (90%)
Strand = Plus / Minus
Query: 743 gcaccgtatctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgcc 802
|||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||
Sbjct: 381 gcaccgtatctggtagcaggagccgcatcccttgccatccttgaagatgggctcgttgcc 322
Query: 803 acaggacgtcatggacgagaacgggtactggttggtgcccttgaacccgcacgcaccacc 862
|| || |||||||| ||||| ||||||||||||||| |||||||||||||||||||||
Sbjct: 321 gcacgatgtcatggaggagaaggggtactggttggtgttcttgaacccgcacgcaccacc 262
Query: 863 gttgtcgacggggccggcgccggtgggggcgccgtaccaggtggccttggc 913
|| ||| | ||||||||| || ||||| |||||||||||||||||| ||||
Sbjct: 261 gtcgtccatggggccggcacccgtgggcgcgccgtaccaggtggccctggc 211
Score = 141 bits (71), Expect = 6e-032
Identities = 134/155 (86%)
Strand = Plus / Minus
Query: 551 gcacggcacccgcctgaactgcatgtcgatgatcccggcgtgccggagcttgtcgttcag 610
||||||||| | | ||||||| ||||||||||| |||| |||||||||||| ||| | ||
Sbjct: 567 gcacggcactctcttgaactggatgtcgatgatgccggagtgccggagcttctcgctgag 508
Query: 611 gccccagctggccatggacccgaacgccgtgccgctcaggtcgaagtggtacttggccac 670
||| ||||||||| |||||||| ||||| ||||||||||||||||||||||| ||
Sbjct: 507 gccgggcttggccatggcgccgaacgcggtgccactcaggtcgaagtggtacttggcaac 448
Query: 671 cgggtagtagttcatgtccgtgatgatcaccgtct 705
|||||||||||||||||| ||||||| ||||||||
Sbjct: 447 cgggtagtagttcatgtcggtgatgaccaccgtct 413
>gb|CA022206.1|CA022206 HZ42H09r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ42H09
5-PRIME, mRNA sequence
Length = 567
Score = 204 bits (103), Expect = 5e-051
Identities = 154/171 (90%)
Strand = Plus / Minus
Query: 743 gcaccgtatctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgcc 802
|||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||
Sbjct: 368 gcaccgtatctggtagcaggagccgcatcccttgccatccttgaagatgggctcgttgcc 309
Query: 803 acaggacgtcatggacgagaacgggtactggttggtgcccttgaacccgcacgcaccacc 862
|| || |||||||| ||||| ||||||||||||||| |||||||||||||||||||||
Sbjct: 308 gcacgatgtcatggaggagaaggggtactggttggtgttcttgaacccgcacgcaccacc 249
Query: 863 gttgtcgacggggccggcgccggtgggggcgccgtaccaggtggccttggc 913
|| ||| | ||||||||| || ||||| |||||||||||||||||| ||||
Sbjct: 248 gtcgtccatggggccggcacccgtgggcgcgccgtaccaggtggccctggc 198
Score = 141 bits (71), Expect = 6e-032
Identities = 134/155 (86%)
Strand = Plus / Minus
Query: 551 gcacggcacccgcctgaactgcatgtcgatgatcccggcgtgccggagcttgtcgttcag 610
||||||||| | | ||||||| ||||||||||| |||| |||||||||||| ||| | ||
Sbjct: 554 gcacggcactctcttgaactggatgtcgatgatgccggagtgccggagcttctcgctgag 495
Query: 611 gccccagctggccatggacccgaacgccgtgccgctcaggtcgaagtggtacttggccac 670
||| ||||||||| |||||||| ||||| ||||||||||||||||||||||| ||
Sbjct: 494 gccgggcttggccatggcgccgaacgcggtgccactcaggtcgaagtggtacttggcaac 435
Query: 671 cgggtagtagttcatgtccgtgatgatcaccgtct 705
|||||||||||||||||| ||||||| ||||||||
Sbjct: 434 cgggtagtagttcatgtcggtgatgaccaccgtct 400
>gb|CK122095.1|CK122095 BES1824101g21 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010G211 5-PRIME, mRNA sequence
Length = 256
Score = 204 bits (103), Expect = 5e-051
Identities = 154/171 (90%)
Strand = Plus / Minus
Query: 743 gcaccgtatctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgcc 802
|||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||
Sbjct: 192 gcaccgtatctggtagcaggagccgcatcccttgccatccttgaagatgggctcgttgcc 133
Query: 803 acaggacgtcatggacgagaacgggtactggttggtgcccttgaacccgcacgcaccacc 862
|| || |||||||| ||||| ||||||||||||||| |||||||||||||||||||||
Sbjct: 132 gcacgatgtcatggaggagaaggggtactggttggtgttcttgaacccgcacgcaccacc 73
Query: 863 gttgtcgacggggccggcgccggtgggggcgccgtaccaggtggccttggc 913
|| ||| | ||||||||| || ||||| |||||||||||||||||| ||||
Sbjct: 72 gtcgtccatggggccggcacccgtgggcgcgccgtaccaggtggccctggc 22
>gb|BF628930.2|BF628930 HVSMEb0009C23f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0009C23f, mRNA sequence
Length = 762
Score = 198 bits (100), Expect = 3e-049
Identities = 226/268 (84%)
Strand = Plus / Minus
Query: 438 atgtccgcctgcaccacgtcgccgtccttgttctcgtgctcgatgagcacggccaggtac 497
|||||| |||| | ||||||||||||| ||| ||||| |||||| ||||| |||||||||
Sbjct: 667 atgtccacctggatcacgtcgccgtccatgtcctcgtactcgatcagcaccgccaggtac 608
Query: 498 atggggttggagccgtgctggacgcggaaggtgatggtcaggcccgggaagttgcacggc 557
| | ||||||||| | | ||| ||||| |||| | ||||| |||||||||||||||
Sbjct: 607 accgcgttggagccctccaccacgtggaagttgatcttgaggccggggaagttgcacggc 548
Query: 558 acccgcctgaactgcatgtcgatgatcccggcgtgccggagcttgtcgttcaggccccag 617
|||| ||||||||| ||||||||||| || | ||| |||||||| ||||| |||||| |
Sbjct: 547 accctcctgaactggatgtcgatgatgcccgagtggcggagcttctcgttgaggcccgac 488
Query: 618 ctggccatggacccgaacgccgtgccgctcaggtcgaagtggtacttggccaccgggtag 677
|||||| || ||||| ||||||||||||||||| |||||||||| ||| |||||||||
Sbjct: 487 ttggccagggcgccgaaggccgtgccgctcaggtcaaagtggtactgggcgaccgggtag 428
Query: 678 tagttcatgtccgtgatgatcaccgtct 705
||||||||||| ||||| ||||||||||
Sbjct: 427 tagttcatgtcggtgatcatcaccgtct 400
Score = 135 bits (68), Expect = 4e-030
Identities = 149/176 (84%)
Strand = Plus / Minus
Query: 747 cgtatctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgccacag 806
|||||||||||||| |||||||| ||||||||||||||||| | ||||| |||||| |||
Sbjct: 364 cgtatctggtagcaggagccgcagcccttgccgtccttgaacaggggctggttgccgcag 305
Query: 807 gacgtcatggacgagaacgggtactggttggtgcccttgaacccgcacgcaccaccgttg 866
|| |||||||| ||||| ||||||||||| | |||||| ||||| || || ||||||
Sbjct: 304 gaggtcatggaggagaaggggtactggttcacgtgcttgaagccgcaagcgccgccgttg 245
Query: 867 tcgacggggccggcgccggtgggggcgccgtaccaggtggccttggccggcagcca 922
||| |||| ||||||||| |||| || ||||||||||| || ||||||| |||||
Sbjct: 244 tcgtcgggcccggcgccgttgggcgctccgtaccaggtcgctctggccgggagcca 189
>gb|BI957226.1|BI957226 HVSMEn0008D17f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0008D17f, mRNA sequence
Length = 438
Score = 196 bits (99), Expect = 1e-048
Identities = 153/171 (89%)
Strand = Plus / Minus
Query: 743 gcaccgtatctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgcc 802
|||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||
Sbjct: 357 gcaccgtatctggtagcaggagccgcatcccttgccatccttgaagatgggctcgttgcc 298
Query: 803 acaggacgtcatggacgagaacgggtactggttggtgcccttgaacccgcacgcaccacc 862
|| || || ||||| ||||| ||||||||||||||| |||||||||||||||||||||
Sbjct: 297 gcacgatgtaatggaggagaaggggtactggttggtgttcttgaacccgcacgcaccacc 238
Query: 863 gttgtcgacggggccggcgccggtgggggcgccgtaccaggtggccttggc 913
|| ||| | ||||||||| || ||||| |||||||||||||||||| ||||
Sbjct: 237 gtcgtccatggggccggcacccgtgggcgcgccgtaccaggtggccctggc 187
Score = 73.8 bits (37), Expect = 1e-011
Identities = 46/49 (93%)
Strand = Plus / Minus
Query: 657 tggtacttggccaccgggtagtagttcatgtccgtgatgatcaccgtct 705
||||||||||| |||||||||||||||||||| ||||||| ||||||||
Sbjct: 437 tggtacttggcaaccgggtagtagttcatgtcggtgatgaccaccgtct 389
>gb|BI958795.1|BI958795 HVSMEn0016K11f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0016K11f, mRNA sequence
Length = 667
Score = 196 bits (99), Expect = 1e-048
Identities = 153/171 (89%)
Strand = Plus / Minus
Query: 743 gcaccgtatctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgcc 802
||||||||| |||||||| |||||||| |||||||| |||||||||||||||||||||||
Sbjct: 368 gcaccgtatatggtagcaggagccgcatcccttgccatccttgaagatgggctcgttgcc 309
Query: 803 acaggacgtcatggacgagaacgggtactggttggtgcccttgaacccgcacgcaccacc 862
|| || |||||||| ||||| ||||||||||||||| |||||||||||||||||||||
Sbjct: 308 gcacgatgtcatggaggagaaggggtactggttggtgttcttgaacccgcacgcaccacc 249
Query: 863 gttgtcgacggggccggcgccggtgggggcgccgtaccaggtggccttggc 913
|| ||| | ||||||||| || ||||| |||||||||||||||||| ||||
Sbjct: 248 gtcgtccatggggccggcacccgtgggcgcgccgtaccaggtggccctggc 198
Score = 85.7 bits (43), Expect = 3e-015
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 647 caggtcgaagtggtacttggccaccgggtagtagttcatgtccgtgatgatcaccgtct 705
||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||
Sbjct: 458 caggtcgaagtggtacttggcacccgggtagtagttcatgtcggtgatgaccaccgtct 400
>gb|BI959720.1|BI959720 HVSMEn0020P05f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0020P05f, mRNA sequence
Length = 615
Score = 196 bits (99), Expect = 1e-048
Identities = 153/171 (89%)
Strand = Plus / Minus
Query: 743 gcaccgtatctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgcc 802
|||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||
Sbjct: 362 gcaccgtatctggtagcaggagccgcatcccttgccatccttgaagatgggctcgttgcc 303
Query: 803 acaggacgtcatggacgagaacgggtactggttggtgcccttgaacccgcacgcaccacc 862
|| || |||||||| ||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 302 gcacgatgtcatggaggagaaggggtactggttggtgttattgaacccgcacgcaccacc 243
Query: 863 gttgtcgacggggccggcgccggtgggggcgccgtaccaggtggccttggc 913
|| ||| | ||||||||| || ||||| |||||||||||||||||| ||||
Sbjct: 242 gtcgtccatggggccggcacccgtgggcgcgccgtaccaggtggccctggc 192
Score = 141 bits (71), Expect = 6e-032
Identities = 134/155 (86%)
Strand = Plus / Minus
Query: 551 gcacggcacccgcctgaactgcatgtcgatgatcccggcgtgccggagcttgtcgttcag 610
||||||||| | | ||||||| ||||||||||| |||| |||||||||||| ||| | ||
Sbjct: 548 gcacggcactctcttgaactggatgtcgatgatgccggagtgccggagcttctcgctgag 489
Query: 611 gccccagctggccatggacccgaacgccgtgccgctcaggtcgaagtggtacttggccac 670
||| ||||||||| |||||||| ||||| ||||||||||||||||||||||| ||
Sbjct: 488 gccgggcttggccatggcgccgaacgcggtgccactcaggtcgaagtggtacttggcaac 429
Query: 671 cgggtagtagttcatgtccgtgatgatcaccgtct 705
|||||||||||||||||| ||||||| ||||||||
Sbjct: 428 cgggtagtagttcatgtcggtgatgaccaccgtct 394
>gb|BI954215.1|BI954215 HVSMEm0016K09f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0016K09f, mRNA sequence
Length = 661
Score = 190 bits (96), Expect = 7e-047
Identities = 152/171 (88%)
Strand = Plus / Minus
Query: 743 gcaccgtatctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgcc 802
|||||||||||||||||| |||||||| |||||||| |||||||||||||||||| ||||
Sbjct: 371 gcaccgtatctggtagcaggagccgcatcccttgccatccttgaagatgggctcgctgcc 312
Query: 803 acaggacgtcatggacgagaacgggtactggttggtgcccttgaacccgcacgcaccacc 862
|| || |||||||| |||| ||||||||||||||| |||||||||||||||||||||
Sbjct: 311 gcacgatgtcatggagnagaaggggtactggttggtgttcttgaacccgcacgcaccacc 252
Query: 863 gttgtcgacggggccggcgccggtgggggcgccgtaccaggtggccttggc 913
|| ||| | ||||||||| || ||||| |||||||||||||||||| ||||
Sbjct: 251 gtcgtccatggggccggcacccgtgggcgcgccgtaccaggtggccctggc 201
Score = 58.0 bits (29), Expect = 7e-007
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 669 accgggtagtagttcatgtccgtgatgatcaccgtct 705
|||||||||||||||||||| ||||||| ||||||||
Sbjct: 439 accgggtagtagttcatgtcggtgatgaccaccgtct 403
>gb|BI957603.1|BI957603 HVSMEn0010F11f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0010F11f, mRNA sequence
Length = 630
Score = 188 bits (95), Expect = 3e-046
Identities = 152/171 (88%)
Strand = Plus / Minus
Query: 743 gcaccgtatctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgcc 802
|||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||
Sbjct: 321 gcaccgtatctggtagcaggagccgcatcccttgccatccttgaagatgggctcgttgcc 262
Query: 803 acaggacgtcatggacgagaacgggtactggttggtgcccttgaacccgcacgcaccacc 862
|| || |||||||| ||||| ||||||||||||||| |||||||||||||||||||||
Sbjct: 261 gcacgatgtcatggaggagaaggggtactggttggtgttcttgaacccgcacgcaccacc 202
Query: 863 gttgtcgacggggccggcgccggtgggggcgccgtaccaggtggccttggc 913
|| ||| | ||||||||| || || | |||||||||||||||||| ||||
Sbjct: 201 gtcgtccatggggccggcacccgtccgcgcgccgtaccaggtggccctggc 151
Score = 141 bits (71), Expect = 6e-032
Identities = 134/155 (86%)
Strand = Plus / Minus
Query: 551 gcacggcacccgcctgaactgcatgtcgatgatcccggcgtgccggagcttgtcgttcag 610
||||||||| | | ||||||| ||||||||||| |||| |||||||||||| ||| | ||
Sbjct: 507 gcacggcactctcttgaactggatgtcgatgatgccggagtgccggagcttctcgctgag 448
Query: 611 gccccagctggccatggacccgaacgccgtgccgctcaggtcgaagtggtacttggccac 670
||| ||||||||| |||||||| ||||| ||||||||||||||||||||||| ||
Sbjct: 447 gccgggcttggccatggcgccgaacgcggtgccactcaggtcgaagtggtacttggcaac 388
Query: 671 cgggtagtagttcatgtccgtgatgatcaccgtct 705
|||||||||||||||||| ||||||| ||||||||
Sbjct: 387 cgggtagtagttcatgtcggtgatgaccaccgtct 353
>gb|BF260026.3|BF260026 HVSMEf0020O13f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0020O13f, mRNA sequence
Length = 535
Score = 182 bits (92), Expect = 2e-044
Identities = 323/400 (80%)
Strand = Plus / Minus
Query: 244 actggacgaaggagcggtagtcgacgtcggggatgtagttggccgggatgacgttcttgg 303
||||||||||||||||||||||| || ||| | |||||||||||||||| || ||||
Sbjct: 400 actggacgaaggagcggtagtcggtgttgggcctccagttggccgggatgacattgttgg 341
Query: 304 ccaccagctgcctgccggactcgttggtgatgcgcatggagaaggggccacggagcgggc 363
||||||||| | ||||||| ||| ||||||||||||||||||| || || |||| ||
Sbjct: 340 ccaccagcttcttgccggagtcgctggtgatgcgcatggagaaaggcccctggaggcggt 281
Query: 364 ggttggggtcgatcctccagatggagccccaggactcgtgcatgggctcccagtggccgg 423
|||||| ||| |||| ||||||||| ||||| |||||| |||| | | ||| || |
Sbjct: 280 ggttggagtccatccgccagatggatccccacgactcgcgcatcgccatccacgaccccg 221
Query: 424 agttgctctgcatgatgtccgcctgcaccacgtcgccgtccttgttctcgtgctcgatga 483
||||| || | | |||||| |||| | ||||||||||||| ||| ||||| |||||| |
Sbjct: 220 agttggcctccttcatgtccacctggatcacgtcgccgtccatgtcctcgtactcgatca 161
Query: 484 gcacggccaggtacatggggttggagccgtgctggacgcggaaggtgatggtcaggcccg 543
|||| |||||||||| | ||||||||| | | ||| ||||| |||| | ||||| |
Sbjct: 160 gcaccgccaggtacaccgcgttggagccctccaccacgtggaagttgatcttgaggccgg 101
Query: 544 ggaagttgcacggcacccgcctgaactgcatgtcgatgatcccggcgtgccggagcttgt 603
|||||||||||||||||| ||||||||| ||||||||||| || | ||| |||||||| |
Sbjct: 100 ggaagttgcacggcaccctcctgaactggatgtcgatgatgcccgagtggcggagcttct 41
Query: 604 cgttcaggccccagctggccatggacccgaacgccgtgcc 643
|||| |||||| | |||||| || ||||| ||||||||
Sbjct: 40 cgttgaggcccgacttggccagggcgccgaaggccgtgcc 1
>gb|AV928430.1|AV928430 AV928430 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basdg18 3', mRNA sequence
Length = 704
Score = 170 bits (86), Expect = 7e-041
Identities = 290/358 (81%)
Strand = Plus / Plus
Query: 244 actggacgaaggagcggtagtcgacgtcggggatgtagttggccgggatgacgttcttgg 303
||||||||||||||||||||||| || ||| | |||||||||||||||| || ||||
Sbjct: 346 actggacgaaggagcggtagtcggtgttgggcctccagttggccgggatgacattgttgg 405
Query: 304 ccaccagctgcctgccggactcgttggtgatgcgcatggagaaggggccacggagcgggc 363
||||||||| | ||||||| ||| ||||||||||||||||||| || || |||| ||
Sbjct: 406 ccaccagcttcttgccggagtcgctggtgatgcgcatggagaaaggcccctggaggcggt 465
Query: 364 ggttggggtcgatcctccagatggagccccaggactcgtgcatgggctcccagtggccgg 423
|||||| ||| |||| ||||||||| ||||| |||||| |||| | | ||| || |
Sbjct: 466 ggttggagtccatccgccagatggatccccacgactcgcgcatcgccatccacgaccccg 525
Query: 424 agttgctctgcatgatgtccgcctgcaccacgtcgccgtccttgttctcgtgctcgatga 483
||||| || | | |||||| |||| | ||||||||||||| ||| ||||| |||||| |
Sbjct: 526 agttggcctccttcatgtccacctggatcacgtcgccgtccatgtcctcgtactcgatca 585
Query: 484 gcacggccaggtacatggggttggagccgtgctggacgcggaaggtgatggtcaggcccg 543
|||| |||||||||| | ||||||||| | | ||| ||||| |||| | ||||| |
Sbjct: 586 gcaccgccaggtacaccgcgttggagccctccaccacgtggaagttgatcttgaggccgg 645
Query: 544 ggaagttgcacggcacccgcctgaactgcatgtcgatgatcccggcgtgccggagctt 601
|||||||||||||||||| ||||||||| ||||||||||| || | ||| ||||||||
Sbjct: 646 ggaagttgcacggcaccctcctgaactggatgtcgatgatgcccgagtggcggagctt 703
>gb|CW512145.1|CW512145 ToNAR_Morex_118b Morex Exon trapped genomic sequences from PCR
products Hordeum vulgare subsp. vulgare genomic, DNA
sequence
Length = 499
Score = 168 bits (85), Expect = 3e-040
Identities = 148/169 (87%)
Strand = Plus / Plus
Query: 537 aggcccgggaagttgcacggcacccgcctgaactgcatgtcgatgatcccggcgtgccgg 596
||||| ||||||||||||||||||| ||||||||| ||||||||||| || | ||| |||
Sbjct: 19 aggccggggaagttgcacggcaccctcctgaactggatgtcgatgatgcccgagtggcgg 78
Query: 597 agcttgtcgttcaggccccagctggccatggacccgaacgccgtgccgctcaggtcgaag 656
||||| ||||| |||||| | |||||| || ||||| ||||||||||||||||| |||
Sbjct: 79 agcttctcgttgaggcccgacttggccagggcgccgaaggccgtgccgctcaggtcaaag 138
Query: 657 tggtacttggccaccgggtagtagttcatgtccgtgatgatcaccgtct 705
||||||| ||| |||||||||||||||||||| ||||| ||||||||||
Sbjct: 139 tggtactgggcgaccgggtagtagttcatgtcggtgatcatcaccgtct 187
Score = 95.6 bits (48), Expect = 3e-018
Identities = 75/84 (89%)
Strand = Plus / Plus
Query: 752 ctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgccacaggacgt 811
||||||||| |||||||| ||||||||||||||||| | ||||| |||||| ||||| ||
Sbjct: 405 ctggtagcaggagccgcagcccttgccgtccttgaacaggggctggttgccgcaggaggt 464
Query: 812 catggacgagaacgggtactggtt 835
|||||| ||||| |||||||||||
Sbjct: 465 catggaggagaaggggtactggtt 488
>gb|AV923254.1|AV923254 AV923254 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd12g18 5', mRNA sequence
Length = 616
Score = 168 bits (85), Expect = 3e-040
Identities = 148/169 (87%)
Strand = Plus / Minus
Query: 537 aggcccgggaagttgcacggcacccgcctgaactgcatgtcgatgatcccggcgtgccgg 596
||||| ||||||||||||||||||| ||||||||| ||||||||||| || | ||| |||
Sbjct: 590 aggccggggaagttgcacggcaccctcctgaactggatgtcgatgatgcccgagtggcgg 531
Query: 597 agcttgtcgttcaggccccagctggccatggacccgaacgccgtgccgctcaggtcgaag 656
||||| ||||| |||||| | |||||| || ||||| ||||||||||||||||| |||
Sbjct: 530 agcttctcgttgaggcccgacttggccagggcgccgaaggccgtgccgctcaggtcaaag 471
Query: 657 tggtacttggccaccgggtagtagttcatgtccgtgatgatcaccgtct 705
||||||| ||| |||||||||||||||||||| ||||| ||||||||||
Sbjct: 470 tggtactgggcgaccgggtagtagttcatgtcggtgatcatcaccgtct 422
Score = 127 bits (64), Expect = 9e-028
Identities = 148/176 (84%)
Strand = Plus / Minus
Query: 747 cgtatctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgccacag 806
|||||||||||||| |||||||| ||||||||||||||||| | ||||| | |||| |||
Sbjct: 386 cgtatctggtagcaggagccgcagcccttgccgtccttgaacaggggctggctgccgcag 327
Query: 807 gacgtcatggacgagaacgggtactggttggtgcccttgaacccgcacgcaccaccgttg 866
|| |||||||| ||||| ||||||||||| | |||||| ||||| || || ||||||
Sbjct: 326 gaggtcatggaggagaaggggtactggttcacgtgcttgaagccgcaagcgccgccgttg 267
Query: 867 tcgacggggccggcgccggtgggggcgccgtaccaggtggccttggccggcagcca 922
||| |||| ||||||||| |||| || ||||||||||| || ||||||| |||||
Sbjct: 266 tcgtcgggcccggcgccgttgggcgctccgtaccaggtcgctctggccgggagcca 211
>gb|CA022237.1|CA022237 HZ42I19r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ42I19
5-PRIME, mRNA sequence
Length = 539
Score = 168 bits (85), Expect = 3e-040
Identities = 148/169 (87%)
Strand = Plus / Minus
Query: 537 aggcccgggaagttgcacggcacccgcctgaactgcatgtcgatgatcccggcgtgccgg 596
||||| ||||||||||||||||||| ||||||||| ||||||||||| || | ||| |||
Sbjct: 539 aggccggggaagttgcacggcaccctcctgaactggatgtcgatgatgcccgagtggcgg 480
Query: 597 agcttgtcgttcaggccccagctggccatggacccgaacgccgtgccgctcaggtcgaag 656
||||| ||||| |||||| | |||||| || ||||| ||||||||||||||||| |||
Sbjct: 479 agcttctcgttgaggcccgacttggccagggcgccgaaggccgtgccgctcaggtcaaag 420
Query: 657 tggtacttggccaccgggtagtagttcatgtccgtgatgatcaccgtct 705
||||||| ||| |||||||||||||||||||| ||||| ||||||||||
Sbjct: 419 tggtactgggcgaccgggtagtagttcatgtcggtgatcatcaccgtct 371
Score = 135 bits (68), Expect = 4e-030
Identities = 149/176 (84%)
Strand = Plus / Minus
Query: 747 cgtatctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgccacag 806
|||||||||||||| |||||||| ||||||||||||||||| | ||||| |||||| |||
Sbjct: 335 cgtatctggtagcaggagccgcagcccttgccgtccttgaacaggggctggttgccgcag 276
Query: 807 gacgtcatggacgagaacgggtactggttggtgcccttgaacccgcacgcaccaccgttg 866
|| |||||||| ||||| ||||||||||| | |||||| ||||| || || ||||||
Sbjct: 275 gaggtcatggaggagaaggggtactggttcacgtgcttgaagccgcaagcgccgccgttg 216
Query: 867 tcgacggggccggcgccggtgggggcgccgtaccaggtggccttggccggcagcca 922
||| |||| ||||||||| |||| || ||||||||||| || ||||||| |||||
Sbjct: 215 tcgtcgggcccggcgccgttgggcgctccgtaccaggtcgctctggccgggagcca 160
>gb|BI956772.1|BI956772 HVSMEn0005E06f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0005E06f, mRNA sequence
Length = 796
Score = 167 bits (84), Expect = 1e-039
Identities = 149/171 (87%)
Strand = Plus / Minus
Query: 743 gcaccgtatctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgcc 802
|||||||||||||||||| |||||||| |||||||| |||||||||||||||| ||||||
Sbjct: 246 gcaccgtatctggtagcaggagccgcatcccttgccatccttgaagatgggctngttgcc 187
Query: 803 acaggacgtcatggacgagaacgggtactggttggtgcccttgaacccgcacgcaccacc 862
| | |||||| ||||| ||||||||||||||| |||||||||||||||||||||
Sbjct: 186 gcccccccccatggaggagaaggggtactggttggtgttcttgaacccgcacgcaccacc 127
Query: 863 gttgtcgacggggccggcgccggtgggggcgccgtaccaggtggccttggc 913
|| ||| | ||||||||| || ||||| |||||||||||||||||| ||||
Sbjct: 126 gtcgtccatggggccggcacccgtgggcgcgccgtaccaggtggccctggc 76
Score = 141 bits (71), Expect = 6e-032
Identities = 134/155 (86%)
Strand = Plus / Minus
Query: 551 gcacggcacccgcctgaactgcatgtcgatgatcccggcgtgccggagcttgtcgttcag 610
||||||||| | | ||||||| ||||||||||| |||| |||||||||||| ||| | ||
Sbjct: 432 gcacggcactctcttgaactggatgtcgatgatgccggagtgccggagcttctcgctgag 373
Query: 611 gccccagctggccatggacccgaacgccgtgccgctcaggtcgaagtggtacttggccac 670
||| ||||||||| |||||||| ||||| ||||||||||||||||||||||| ||
Sbjct: 372 gccgggcttggccatggcgccgaacgcggtgccactcaggtcgaagtggtacttggcaac 313
Query: 671 cgggtagtagttcatgtccgtgatgatcaccgtct 705
|||||||||||||||||| ||||||| ||||||||
Sbjct: 312 cgggtagtagttcatgtcggtgatgaccaccgtct 278
>gb|BM372935.2|BM372935 EBma04_SQ002_H04_R maternal, 10 DPA, no treatment, cv Optic, EBma04
Hordeum vulgare subsp. vulgare cDNA clone
EBma04_SQ002_H04 5', mRNA sequence
Length = 612
Score = 165 bits (83), Expect = 4e-039
Identities = 146/167 (87%)
Strand = Plus / Minus
Query: 750 atctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgccacaggac 809
|||| ||||||||||||||| ||||||||||||||||| | |||| |||||| |||||
Sbjct: 366 atcttgtagcatgagccgcatcccttgccgtccttgaacaatggctggttgccgcaggag 307
Query: 810 gtcatggacgagaacgggtactggttggtgcccttgaacccgcacgcaccaccgttgtcg 869
|||||||||| ||||||||||||||||||| |||||| ||||| |||||||||||||||
Sbjct: 306 gtcatggacgcgaacgggtactggttggtgtgcttgaagccgcaggcaccaccgttgtcg 247
Query: 870 acggggccggcgccggtgggggcgccgtaccaggtggccttggccgg 916
||||||||||||| |||| |||||||||||| ||| |||||||
Sbjct: 246 tcggggccggcgccattgggctggccgtaccaggtcgccctggccgg 200
Score = 95.6 bits (48), Expect = 3e-018
Identities = 69/76 (90%)
Strand = Plus / Minus
Query: 630 ccgaacgccgtgccgctcaggtcgaagtggtacttggccaccgggtagtagttcatgtcc 689
|||||||| |||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 480 ccgaacgctgtgccgctgaggtcgaagtggtagggcgccaccgggtagtagttcatgtcg 421
Query: 690 gtgatgatcaccgtct 705
||||||||||||||||
Sbjct: 420 gtgatgatcaccgtct 405
Score = 56.0 bits (28), Expect = 3e-006
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 540 cccgggaagttgcacggcacccgcctgaactgcatgtcgatgatcccggcgtgccggagc 599
|||||||| | |||||||||||| |||||| ||||||||||| |||| ||| ||||||
Sbjct: 570 cccgggaactcgcacggcacccgtgtgaactcgatgtcgatgatgccggagtggcggagc 511
Query: 600 ttgtcgtt 607
|||||||
Sbjct: 510 ctgtcgtt 503
>gb|CA023986.1|CA023986 HZ48A15r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ48A15
5-PRIME, mRNA sequence
Length = 584
Score = 165 bits (83), Expect = 4e-039
Identities = 143/163 (87%)
Strand = Plus / Minus
Query: 543 gggaagttgcacggcacccgcctgaactgcatgtcgatgatcccggcgtgccggagcttg 602
||||||||||||||||||| ||||||||| ||||||||||| || | ||| ||||||||
Sbjct: 582 gggaagttgcacggcaccctcctgaactggatgtcgatgatgcccgagtggcggagcttc 523
Query: 603 tcgttcaggccccagctggccatggacccgaacgccgtgccgctcaggtcgaagtggtac 662
||||| |||||| | |||||| || ||||| ||||||||||||||||| |||||||||
Sbjct: 522 tcgttgaggcccgacttggccagggcgccgaaggccgtgccgctcaggtcaaagtggtac 463
Query: 663 ttggccaccgggtagtagttcatgtccgtgatgatcaccgtct 705
| ||| |||||||||||||||||||| ||||| ||||||||||
Sbjct: 462 tgggcgaccgggtagtagttcatgtcggtgatcatcaccgtct 420
Score = 135 bits (68), Expect = 4e-030
Identities = 149/176 (84%)
Strand = Plus / Minus
Query: 747 cgtatctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgccacag 806
|||||||||||||| |||||||| ||||||||||||||||| | ||||| |||||| |||
Sbjct: 384 cgtatctggtagcaggagccgcagcccttgccgtccttgaacaggggctggttgccgcag 325
Query: 807 gacgtcatggacgagaacgggtactggttggtgcccttgaacccgcacgcaccaccgttg 866
|| |||||||| ||||| ||||||||||| | |||||| ||||| || || ||||||
Sbjct: 324 gaggtcatggaggagaaggggtactggttcacgtgcttgaagccgcaagcgccgccgttg 265
Query: 867 tcgacggggccggcgccggtgggggcgccgtaccaggtggccttggccggcagcca 922
||| |||| ||||||||| |||| || ||||||||||| || ||||||| |||||
Sbjct: 264 tcgtcgggcccggcgccgttgggcgctccgtaccaggtcgctctggccgggagcca 209
>gb|CB882163.1|CB882163 HL01B01w HL Hordeum vulgare subsp. vulgare cDNA clone HL01B01
3-PRIME, mRNA sequence
Length = 574
Score = 165 bits (83), Expect = 4e-039
Identities = 146/167 (87%)
Strand = Plus / Minus
Query: 750 atctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgccacaggac 809
|||| ||||||||||||||| ||||||||||||||||| | |||| |||||| |||||
Sbjct: 380 atcttgtagcatgagccgcatcccttgccgtccttgaacaatggctggttgccgcaggag 321
Query: 810 gtcatggacgagaacgggtactggttggtgcccttgaacccgcacgcaccaccgttgtcg 869
|||||||||| ||||||||||||||||||| |||||| ||||| |||||||||||||||
Sbjct: 320 gtcatggacgcgaacgggtactggttggtgtgcttgaagccgcaggcaccaccgttgtcg 261
Query: 870 acggggccggcgccggtgggggcgccgtaccaggtggccttggccgg 916
||||||||||||| |||| |||||||||||| ||| |||||||
Sbjct: 260 tcggggccggcgccattgggctggccgtaccaggtcgccctggccgg 214
Score = 95.6 bits (48), Expect = 3e-018
Identities = 69/76 (90%)
Strand = Plus / Minus
Query: 630 ccgaacgccgtgccgctcaggtcgaagtggtacttggccaccgggtagtagttcatgtcc 689
|||||||| |||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 494 ccgaacgctgtgccgctgaggtcgaagtggtagggcgccaccgggtagtagttcatgtcg 435
Query: 690 gtgatgatcaccgtct 705
||||||||||||||||
Sbjct: 434 gtgatgatcaccgtct 419
Score = 50.1 bits (25), Expect = 2e-004
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 551 gcacggcacccgcctgaactgcatgtcgatgatcccggcgtgccggagcttgtcgtt 607
|||||||||||| |||||| ||||||||||| |||| ||| |||||| |||||||
Sbjct: 573 gcacggcacccgtgtgaactcgatgtcgatgatgccggagtggcggagcctgtcgtt 517
>gb|CK125696.1|CK125696 BES1824110b08 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010B0810 5-PRIME, mRNA sequence
Length = 638
Score = 165 bits (83), Expect = 4e-039
Identities = 146/167 (87%)
Strand = Plus / Minus
Query: 750 atctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgccacaggac 809
|||| ||||||||||||||| ||||||||||||||||| | |||| |||||| |||||
Sbjct: 316 atcttgtagcatgagccgcatcccttgccgtccttgaacaatggctggttgccgcaggag 257
Query: 810 gtcatggacgagaacgggtactggttggtgcccttgaacccgcacgcaccaccgttgtcg 869
|||||||||| ||||||||||||||||||| |||||| ||||| |||||||||||||||
Sbjct: 256 gtcatggacgcgaacgggtactggttggtgtgcttgaagccgcaggcaccaccgttgtcg 197
Query: 870 acggggccggcgccggtgggggcgccgtaccaggtggccttggccgg 916
||||||||||||| |||| |||||||||||| ||| |||||||
Sbjct: 196 tcggggccggcgccattgggctggccgtaccaggtcgccctggccgg 150
Score = 95.6 bits (48), Expect = 3e-018
Identities = 69/76 (90%)
Strand = Plus / Minus
Query: 630 ccgaacgccgtgccgctcaggtcgaagtggtacttggccaccgggtagtagttcatgtcc 689
|||||||| |||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 430 ccgaacgctgtgccgctgaggtcgaagtggtagggcgccaccgggtagtagttcatgtcg 371
Query: 690 gtgatgatcaccgtct 705
||||||||||||||||
Sbjct: 370 gtgatgatcaccgtct 355
>gb|BQ767787.1|BQ767787 EBro08_SQ009_H22_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ009_H22 5', mRNA sequence
Length = 631
Score = 161 bits (81), Expect = 6e-038
Identities = 147/169 (86%)
Strand = Plus / Minus
Query: 537 aggcccgggaagttgcacggcacccgcctgaactgcatgtcgatgatcccggcgtgccgg 596
||||| ||||||||||||||||||| | ||||||| ||||||||||| || | ||| |||
Sbjct: 574 aggccggggaagttgcacggcaccctcttgaactggatgtcgatgatgcccgagtggcgg 515
Query: 597 agcttgtcgttcaggccccagctggccatggacccgaacgccgtgccgctcaggtcgaag 656
||||| ||||| |||||| | |||||| || ||||| ||||||||||||||||| |||
Sbjct: 514 agcttctcgttgaggcccgacttggccagggcgccgaaggccgtgccgctcaggtcaaag 455
Query: 657 tggtacttggccaccgggtagtagttcatgtccgtgatgatcaccgtct 705
||||||| ||| |||||||||||||||||||| ||||| ||||||||||
Sbjct: 454 tggtactgggcgaccgggtagtagttcatgtcggtgatcatcaccgtct 406
Score = 135 bits (68), Expect = 4e-030
Identities = 149/176 (84%)
Strand = Plus / Minus
Query: 747 cgtatctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgccacag 806
|||||||||||||| |||||||| ||||||||||||||||| | ||||| |||||| |||
Sbjct: 370 cgtatctggtagcaggagccgcagcccttgccgtccttgaacaggggctggttgccgcag 311
Query: 807 gacgtcatggacgagaacgggtactggttggtgcccttgaacccgcacgcaccaccgttg 866
|| |||||||| ||||| ||||||||||| | |||||| ||||| || || ||||||
Sbjct: 310 gaggtcatggaggagaaggggtactggttcacgtgcttgaagccgcaagcgccgccgttg 251
Query: 867 tcgacggggccggcgccggtgggggcgccgtaccaggtggccttggccggcagcca 922
||| |||| ||||||||| |||| || ||||||||||| || ||||||| |||||
Sbjct: 250 tcgtcgggcccggcgccgttgggcgctccgtaccaggtcgctctggccgggagcca 195
>gb|BI956468.1|BI956468 HVSMEn0003I18f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0003I18f, mRNA sequence
Length = 895
Score = 159 bits (80), Expect = 2e-037
Identities = 146/168 (86%)
Strand = Plus / Minus
Query: 746 ccgtatctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgccaca 805
|||||| |||||||| |||||||| |||||||| ||||||||||||||||||||||| ||
Sbjct: 368 ccgtatttggtagcaggagccgcatcccttgccatccttgaagatgggctcgttgccgca 309
Query: 806 ggacgtcatggacgagaacgggtactggttggtgcccttgaacccgcacgcaccaccgtt 865
|| |||||| | | || |||| |||||||||| ||||||||||||||||||||||
Sbjct: 308 cgatgtcatgcagcacaaggggtcctggttggtgttattgaacccgcacgcaccaccgtc 249
Query: 866 gtcgacggggccggcgccggtgggggcgccgtaccaggtggccttggc 913
||| | ||||||||| || ||||| |||||||||||||||||||||||
Sbjct: 248 gtccatggggccggcacccgtgggcgcgccgtaccaggtggccttggc 201
Score = 40.1 bits (20), Expect = 0.16
Identities = 41/48 (85%)
Strand = Plus / Minus
Query: 648 aggtcgaagtggtacttggccaccgggtagtagttcatgtccgtgatg 695
||||| |||||||||||| | | ||| ||||||||||||| ||||||
Sbjct: 460 aggtccaagtggtacttgccaaaggggaagtagttcatgtcggtgatg 413
>gb|BG310251.1|BG310251 HVSMEc0016K12f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0016K12f, mRNA sequence
Length = 787
Score = 157 bits (79), Expect = 1e-036
Identities = 145/167 (86%)
Strand = Plus / Minus
Query: 750 atctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgccacaggac 809
|||| ||||||||||||||| ||||||||||||||||| | |||| |||||| |||||
Sbjct: 372 atcttgtagcatgagccgcatcccttgccgtccttgaacaatggctggttgccgcaggag 313
Query: 810 gtcatggacgagaacgggtactggttggtgcccttgaacccgcacgcaccaccgttgtcg 869
|||||||||| ||||||||||||||||||| |||||| ||||| |||||||||||||||
Sbjct: 312 gtcatggacgcgaacgggtactggttggtgtgcttgaagccgcaggcaccaccgttgtcg 253
Query: 870 acggggccggcgccggtgggggcgccgtaccaggtggccttggccgg 916
||||||||||||| |||| ||| |||||||| ||| |||||||
Sbjct: 252 tcggggccggcgccattgggctggccataccaggtcgccctggccgg 206
Score = 103 bits (52), Expect = 1e-020
Identities = 70/76 (92%)
Strand = Plus / Minus
Query: 630 ccgaacgccgtgccgctcaggtcgaagtggtacttggccaccgggtagtagttcatgtcc 689
||||||||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 486 ccgaacgccgtgccgctgaggtcgaagtggtagggcgccaccgggtagtagttcatgtcg 427
Query: 690 gtgatgatcaccgtct 705
||||||||||||||||
Sbjct: 426 gtgatgatcaccgtct 411
Score = 50.1 bits (25), Expect = 2e-004
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 551 gcacggcacccgcctgaactgcatgtcgatgatcccggcgtgccggagcttgtcgtt 607
|||||||||||| |||| | ||||||||||| |||| |||||||||| |||||||
Sbjct: 565 gcacggcacccgtgtgaattcgatgtcgatgatgccggagtgccggagcctgtcgtt 509
>gb|BI957582.1|BI957582 HVSMEn0010D14f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0010D14f, mRNA sequence
Length = 628
Score = 157 bits (79), Expect = 1e-036
Identities = 145/167 (86%)
Strand = Plus / Minus
Query: 750 atctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgccacaggac 809
|||| ||||||||||||||| ||||||||||||||||| | |||| |||||| |||||
Sbjct: 386 atcttgtagcatgagccgcatcccttgccgtccttgaacaatggctggttgccgcaggag 327
Query: 810 gtcatggacgagaacgggtactggttggtgcccttgaacccgcacgcaccaccgttgtcg 869
|||||||||| ||||||||||||||||||| |||||| ||||| |||||||||||||||
Sbjct: 326 gtcatggacgcgaacgggtactggttggtgtgcttgaagccgcaggcaccaccgttgtcg 267
Query: 870 acggggccggcgccggtgggggcgccgtaccaggtggccttggccgg 916
||||||||||||| |||| ||| |||||||| ||| |||||||
Sbjct: 266 tcggggccggcgccattgggctggccataccaggtcgccctggccgg 220
Score = 103 bits (52), Expect = 1e-020
Identities = 70/76 (92%)
Strand = Plus / Minus
Query: 630 ccgaacgccgtgccgctcaggtcgaagtggtacttggccaccgggtagtagttcatgtcc 689
||||||||||||||| |||||||||||||||| |||||||||||||||||||||||
Sbjct: 500 ccgaacgccgtgccggtcaggtcgaagtggtagggcgccaccgggtagtagttcatgtcg 441
Query: 690 gtgatgatcaccgtct 705
||||||||||||||||
Sbjct: 440 gtgatgatcaccgtct 425
Score = 56.0 bits (28), Expect = 3e-006
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 540 cccgggaagttgcacggcacccgcctgaactgcatgtcgatgatcccggcgtgccggagc 599
|||||||| | |||||||||||| |||||| ||||||||||| |||| ||| ||||||
Sbjct: 590 cccgggaattcgcacggcacccgtgtgaactcgatgtcgatgatgccggagtggcggagc 531
Query: 600 ttgtcgtt 607
|||||||
Sbjct: 530 ctgtcgtt 523
>gb|BI960089.1|BI960089 HVSMEn0023C15f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0023C15f, mRNA sequence
Length = 646
Score = 157 bits (79), Expect = 1e-036
Identities = 145/167 (86%)
Strand = Plus / Minus
Query: 750 atctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgccacaggac 809
|||| ||||||||||||||| ||||||||||||||||| | |||| |||||| |||||
Sbjct: 384 atcttgtagcatgagccgcatcccttgccgtccttgaacaatggctggttgccgcaggag 325
Query: 810 gtcatggacgagaacgggtactggttggtgcccttgaacccgcacgcaccaccgttgtcg 869
|||||||||| ||||||||||||||||||| |||||| ||||| |||||||||||||||
Sbjct: 324 gtcatggacgcgaacgggtactggttggtgtgcttgaagccgcaggcaccaccgttgtcg 265
Query: 870 acggggccggcgccggtgggggcgccgtaccaggtggccttggccgg 916
||||||||||||| |||| ||| |||||||| ||| |||||||
Sbjct: 264 tcggggccggcgccattgggctggccataccaggtcgccctggccgg 218
Score = 95.6 bits (48), Expect = 3e-018
Identities = 69/76 (90%)
Strand = Plus / Minus
Query: 630 ccgaacgccgtgccgctcaggtcgaagtggtacttggccaccgggtagtagttcatgtcc 689
||||||||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 498 ccgaacgccgtgccgctgaggtcgaagtggtagggcgccaccgggtagtagttcatgtcg 439
Query: 690 gtgatgatcaccgtct 705
|| |||||||||||||
Sbjct: 438 gtaatgatcaccgtct 423
Score = 56.0 bits (28), Expect = 3e-006
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 540 cccgggaagttgcacggcacccgcctgaactgcatgtcgatgatcccggcgtgccggagc 599
|||||||| | |||||||||||| |||||| ||||||||||| |||| ||| ||||||
Sbjct: 588 cccgggaactcgcacggcacccgtgtgaactcgatgtcgatgatgccggagtggcggagc 529
Query: 600 ttgtcgtt 607
|||||||
Sbjct: 528 ctgtcgtt 521
>gb|BI959812.1|BI959812 HVSMEn0021L03f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0021L03f, mRNA sequence
Length = 644
Score = 151 bits (76), Expect = 6e-035
Identities = 133/152 (87%)
Strand = Plus / Minus
Query: 757 agcatgagccgcaacccttgccgtccttgaagatgggctcgttgccacaggacgtcatgg 816
|||| |||| ||| |||||||| ||||||||||||||||||||||| || || |||||||
Sbjct: 324 agcaggagcagcatcccttgccatccttgaagatgggctcgttgccgcacgatgtcatgg 265
Query: 817 acgagaacgggtactggttggtgcccttgaacccgcacgcaccaccgttgtcgacggggc 876
| ||||| ||||| ||||||||| ||||||||||||||||||||||| ||| | |||||
Sbjct: 264 aggagaaggggtagtggttggtgttcttgaacccgcacgcaccaccgtcgtccatggggc 205
Query: 877 cggcgccggtgggggcgccgtaccaggtggcc 908
||| || ||||| ||||||||||||||||||
Sbjct: 204 tggcacctgtgggcgcgccgtaccaggtggcc 173
Score = 117 bits (59), Expect = 8e-025
Identities = 80/87 (91%)
Strand = Plus / Minus
Query: 619 tggccatggacccgaacgccgtgccgctcaggtcgaagtggtacttggccaccgggtagt 678
||||||||| |||||||| ||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 456 tggccatggcgccgaacgcggtgccactcaggtcgaagtggtacttggcaaccgggtagt 397
Query: 679 agttcatgtccgtgatgatcaccgtct 705
|||||||||| ||||||| ||||||||
Sbjct: 396 agttcatgtcggtgatgaccaccgtct 370
>gb|BQ760850.1|BQ760850 EBro03_SQ003_K11_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ003_K11 5', mRNA sequence
Length = 204
Score = 151 bits (76), Expect = 6e-035
Identities = 154/180 (85%)
Strand = Plus / Minus
Query: 551 gcacggcacccgcctgaactgcatgtcgatgatcccggcgtgccggagcttgtcgttcag 610
||||||||||| | |||||||||||||||||||||| || || ||||||| |||||| |
Sbjct: 190 gcacggcaccctcttgaactgcatgtcgatgatcccagcatggcggagctcgtcgttgcg 131
Query: 611 gccccagctggccatggacccgaacgccgtgccgctcaggtcgaagtggtacttggccac 670
|||| ||||||||| ||||| || |||||||| |||||||||||||| ||| ||
Sbjct: 130 gccctccttggccatggcgccgaaggcggtgccgctgaggtcgaagtggtagcgggcgac 71
Query: 671 cgggtagtagttcatgtccgtgatgatcaccgtctgagccacgccggagcaggccgggtg 730
||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||
Sbjct: 70 cgggtagtagttcatgtccatgatgatcaccgtctcggggacgccggagcaggccgggtg 11
>gb|BF618493.2|BF618493 HVSMEc0005N13f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0005N13f, mRNA sequence
Length = 798
Score = 149 bits (75), Expect = 2e-034
Identities = 144/167 (86%)
Strand = Plus / Minus
Query: 750 atctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgccacaggac 809
|||| ||||||||||||||| ||||||||||||||||| | |||| |||||| |||||
Sbjct: 375 atcttgtagcatgagccgcatcccttgccgtccttgaacaatggctggttgccgcaggag 316
Query: 810 gtcatggacgagaacgggtactggttggtgcccttgaacccgcacgcaccaccgttgtcg 869
|||||||||| ||||||||||||||||||| |||||| ||||| ||||| |||||||||
Sbjct: 315 gtcatggacgcgaacgggtactggttggtgtgcttgaagccgcaggcacctccgttgtcg 256
Query: 870 acggggccggcgccggtgggggcgccgtaccaggtggccttggccgg 916
||||||||||||| |||| ||| |||||||| ||| |||||||
Sbjct: 255 tcggggccggcgccattgggctggccataccaggtcgccctggccgg 209
Score = 56.0 bits (28), Expect = 3e-006
Identities = 64/76 (84%)
Strand = Plus / Minus
Query: 630 ccgaacgccgtgccgctcaggtcgaagtggtacttggccaccgggtagtagttcatgtcc 689
||||||||||| ||| | ||||| ||||||| ||| |||||||||||||||||||
Sbjct: 489 ccgaacgccgttccgttgaggtcatagtggtagggcgcccccgggtagtagttcatgtcg 430
Query: 690 gtgatgatcaccgtct 705
||||||||| ||||||
Sbjct: 429 gtgatgatccccgtct 414
Score = 46.1 bits (23), Expect = 0.003
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 573 atgtcgatgatcccggcgtgccggagcttgtcgtt 607
||||||||||| |||| ||| ||||||||||||||
Sbjct: 546 atgtcgatgatgccggagtggcggagcttgtcgtt 512
>gb|BI959328.1|BI959328 HVSMEn0019E09f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0019E09f, mRNA sequence
Length = 699
Score = 149 bits (75), Expect = 2e-034
Identities = 144/167 (86%)
Strand = Plus / Minus
Query: 750 atctggtagcatgagccgcaacccttgccgtccttgaagatgggctcgttgccacaggac 809
|||| ||||||||||||||| ||||||||||||||||| | |||| |||||| ||| |
Sbjct: 384 atcttgtagcatgagccgcatcccttgccgtccttgaacaatggctggttgccgcagaag 325
Query: 810 gtcatggacgagaacgggtactggttggtgcccttgaacccgcacgcaccaccgttgtcg 869
|||||||||| ||||||||||||||||||| |||||| ||||| |||||||||||||||
Sbjct: 324 gtcatggacgcgaacgggtactggttggtgtgcttgaagccgcaggcaccaccgttgtcg 265
Query: 870 acggggccggcgccggtgggggcgccgtaccaggtggccttggccgg 916
||||||||||||| |||| ||| |||||||| ||| |||||||
Sbjct: 264 tcggggccggcgccattgggctggccataccaggtcgccctggccgg 218
Score = 60.0 bits (30), Expect = 2e-007
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 648 aggtcgaagtggtacttggccaccgggtagtagttcatgtccgtgatgatcaccgtct 705
|||||||||||||| ||| ||||||||||||||||||| ||||||||||| ||||
Sbjct: 480 aggtcgaagtggtagggcgcccccgggtagtagttcatgtcggtgatgatcacggtct 423
>gb|CV054003.1|CV054003 BNEL105f8 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL105f8 5' similar to Oryza sativa
beta-expansin, mRNA sequence
Length = 702
Score = 145 bits (73), Expect = 4e-033
Identities = 223/273 (81%)
Strand = Plus / Minus
Query: 551 gcacggcacccgcctgaactgcatgtcgatgatcccggcgtgccggagcttgtcgttcag 610
||||||||||| | |||||||||||| ||| || |||||||| ||||||| |||||| |
Sbjct: 491 gcacggcaccctcttgaactgcatgttgataatgccggcgtggcggagctcgtcgttgcg 432
Query: 611 gccccagctggccatggacccgaacgccgtgccgctcaggtcgaagtggtacttggccac 670
|| | ||||||||| ||||| || ||||| || |||||||||||||| || ||
Sbjct: 431 tccgtacttggccatggctccgaaggcggtgccactgaggtcgaagtggtagcgggagac 372
Query: 671 cgggtagtagttcatgtccgtgatgatcaccgtctgagccacgccggagcaggccgggtg 730
||||| |||||||||||| |||||||||||||||| | ||| |||||||| || |||||
Sbjct: 371 cgggtcgtagttcatgtctgtgatgatcaccgtcttgggcacaccggagcacgcagggtg 312
Query: 731 gttgctcttcaggcaccgtatctggtagcatgagccgcaacccttgccgtccttgaagat 790
|| || | ||||| |||||||||||| |||||||| |||||||||||||||||||
Sbjct: 311 gtccgagtttaagcaccttatctggtagcaggagccgcagcccttgccgtccttgaagag 252
Query: 791 gggctcgttgccacaggacgtcatggacgagaa 823
|| | |||||| ||||| |||||||| |||||
Sbjct: 251 cggttggttgccgcaggaggtcatggaggagaa 219
>gb|CV054400.1|CV054400 BNEL10B12 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL10B12 5' similar to Oryza sativa
beta-expansin, mRNA sequence
Length = 533
Score = 145 bits (73), Expect = 4e-033
Identities = 223/273 (81%)
Strand = Plus / Minus
Query: 551 gcacggcacccgcctgaactgcatgtcgatgatcccggcgtgccggagcttgtcgttcag 610
||||||||||| | |||||||||||| ||| || |||||||| ||||||| |||||| |
Sbjct: 491 gcacggcaccctcttgaactgcatgttgataatgccggcgtggcggagctcgtcgttgcg 432
Query: 611 gccccagctggccatggacccgaacgccgtgccgctcaggtcgaagtggtacttggccac 670
|| | ||||||||| ||||| || ||||| || |||||||||||||| || ||
Sbjct: 431 tccgtacttggccatggctccgaaggcggtgccactgaggtcgaagtggtagcgggagac 372
Query: 671 cgggtagtagttcatgtccgtgatgatcaccgtctgagccacgccggagcaggccgggtg 730
||||| |||||||||||| |||||||||||||||| | ||| |||||||| || |||||
Sbjct: 371 cgggtcgtagttcatgtctgtgatgatcaccgtcttgggcacaccggagcacgcagggtg 312
Query: 731 gttgctcttcaggcaccgtatctggtagcatgagccgcaacccttgccgtccttgaagat 790
|| || | ||||| |||||||||||| |||||||| |||||||||||||||||||
Sbjct: 311 gtccgagtttaagcaccttatctggtagcaggagccgcagcccttgccgtccttgaagag 252
Query: 791 gggctcgttgccacaggacgtcatggacgagaa 823
|| | |||||| ||||| |||||||| |||||
Sbjct: 251 cggttggttgccgcaggaggtcatggaggagaa 219
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 152,809
Number of Sequences: 312970
Number of extensions: 152809
Number of successful extensions: 44660
Number of sequences better than 0.5: 173
Number of HSP's better than 0.5 without gapping: 173
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 43963
Number of HSP's gapped (non-prelim): 586
length of query: 1155
length of database: 175,134,539
effective HSP length: 19
effective length of query: 1136
effective length of database: 169,188,109
effective search space: 192197691824
effective search space used: 192197691824
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)