BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3713139.2.1
(487 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BF623132.1|BF623132 HVSMEa0014L04f Hordeum vulgare seedl... 192 7e-048
gb|AV909356.1|AV909356 AV909356 K. Sato unpublished cDNA li... 192 7e-048
gb|AV911246.1|AV911246 AV911246 K. Sato unpublished cDNA li... 192 7e-048
gb|AV920622.1|AV920622 AV920622 K. Sato unpublished cDNA li... 192 7e-048
gb|BM816266.1|BM816266 HC01H12_T3.ab1 HC Hordeum vulgare su... 192 7e-048
gb|BM816267.1|BM816267 HB105E10_SK.ab1 HB Hordeum vulgare s... 192 7e-048
gb|AJ463225.1|AJ463225 AJ463225 S00002 Hordeum vulgare subs... 192 7e-048
gb|BJ467893.1|BJ467893 BJ467893 K. Sato unpublished cDNA li... 192 7e-048
gb|BQ463470.1|BQ463470 HI05G01r HI Hordeum vulgare subsp. v... 192 7e-048
gb|BQ662350.1|BQ662350 HS01P12w HS Hordeum vulgare subsp. v... 192 7e-048
gb|BM370842.2|BM370842 EBro04_SQ002_H20_R root, 3 week, sal... 192 7e-048
gb|BQ756731.1|BQ756731 EBem09_SQ003_J13_R embryo, 1 Day ger... 192 7e-048
gb|BQ762433.1|BQ762433 EBro01_SQ005_H19_R root, 3 week, hyd... 192 7e-048
gb|BQ768330.1|BQ768330 EBro08_SQ011_L11_R root, 3 week, dro... 192 7e-048
gb|BU983773.1|BU983773 HA31A05r HA Hordeum vulgare subsp. v... 192 7e-048
gb|BU984019.1|BU984019 HA31L23r HA Hordeum vulgare subsp. v... 192 7e-048
gb|BU994116.1|BU994116 HM05M18r HM Hordeum vulgare subsp. v... 192 7e-048
gb|CB880777.1|CB880777 HM07M18w HM Hordeum vulgare subsp. v... 192 7e-048
gb|AV915524.1|AV915524 AV915524 K. Sato unpublished cDNA li... 182 7e-045
gb|AL500306.1|AL500306 AL500306 Hordeum vulgare Barke etiol... 161 3e-038
gb|BU994867.1|BU994867 HM08H04r HM Hordeum vulgare subsp. v... 161 3e-038
gb|CB880990.1|CB880990 HM08H04w HM Hordeum vulgare subsp. v... 161 3e-038
gb|CB858524.1|CB858524 HI07F20w HI Hordeum vulgare subsp. v... 155 2e-036
gb|BM370864.2|BM370864 EBro04_SQ002_J12_R root, 3 week, sal... 151 3e-035
gb|BM370810.2|BM370810 EBro04_SQ002_F16_R root, 3 week, sal... 133 6e-030
gb|BI959146.1|BI959146 HVSMEn0018G05f Hordeum vulgare rachi... 125 1e-027
gb|BF259284.2|BF259284 HVSMEf0018M04f Hordeum vulgare seedl... 121 2e-026
gb|AL500754.1|AL500754 AL500754 Hordeum vulgare Barke roots... 119 9e-026
gb|AL502363.1|AL502363 AL502363 Hordeum vulgare Barke roots... 119 9e-026
gb|AL510412.1|AL510412 AL510412 Hordeum vulgare Barke devel... 119 9e-026
gb|BI958137.1|BI958137 HVSMEn0013J09f Hordeum vulgare rachi... 119 9e-026
gb|BI958959.1|BI958959 HVSMEn0017G17f Hordeum vulgare rachi... 119 9e-026
gb|BI959762.1|BI959762 HVSMEn0021F08f Hordeum vulgare rachi... 119 9e-026
gb|AV914685.1|AV914685 AV914685 K. Sato unpublished cDNA li... 119 9e-026
gb|AV916593.1|AV916593 AV916593 K. Sato unpublished cDNA li... 119 9e-026
gb|AV917477.1|AV917477 AV917477 K. Sato unpublished cDNA li... 119 9e-026
gb|AV918120.1|AV918120 AV918120 K. Sato unpublished cDNA li... 119 9e-026
gb|AV918153.1|AV918153 AV918153 K. Sato unpublished cDNA li... 119 9e-026
gb|AV919777.1|AV919777 AV919777 K. Sato unpublished cDNA li... 119 9e-026
gb|AV921737.1|AV921737 AV921737 K. Sato unpublished cDNA li... 119 9e-026
gb|BM816403.1|BM816403 HC108H05_SK.ab1 HC Hordeum vulgare s... 119 9e-026
gb|AJ432034.1|AJ432034 AJ432034 S00002 Hordeum vulgare subs... 119 9e-026
gb|BJ464194.1|BJ464194 BJ464194 K. Sato unpublished cDNA li... 119 9e-026
gb|BJ466653.1|BJ466653 BJ466653 K. Sato unpublished cDNA li... 119 9e-026
gb|BJ467967.1|BJ467967 BJ467967 K. Sato unpublished cDNA li... 119 9e-026
gb|BQ766369.1|BQ766369 EBro08_SQ005_E20_R root, 3 week, dro... 119 9e-026
gb|BQ768409.1|BQ768409 EBro08_SQ011_K14_R root, 3 week, dro... 119 9e-026
gb|CK122417.1|CK122417 BES1824103e24 BES1824 Hordeum vulgar... 117 3e-025
gb|AL509867.1|AL509867 AL509867 Hordeum vulgare Barke devel... 113 5e-024
gb|AJ462404.1|AJ462404 AJ462404 S00002 Hordeum vulgare subs... 105 1e-021
gb|AJ462405.1|AJ462405 AJ462405 S00002 Hordeum vulgare subs... 105 1e-021
gb|BF260200.2|BF260200 HVSMEf0021F24f Hordeum vulgare seedl... 103 5e-021
gb|CA007928.1|CA007928 HU09G15r HU Hordeum vulgare subsp. v... 103 5e-021
gb|BQ662559.1|BQ662559 HS02P12u HS Hordeum vulgare subsp. v... 100 8e-020
gb|AJ435096.1|AJ435096 AJ435096 S00002 Hordeum vulgare subs... 98 3e-019
gb|BU971118.1|BU971118 HB16K16r BC Hordeum vulgare subsp. v... 98 3e-019
gb|BI957972.1|BI957972 HVSMEn0012L17f Hordeum vulgare rachi... 70 7e-011
gb|BU999760.1|BU999760 HI15K19r HI Hordeum vulgare subsp. v... 64 5e-009
gb|BI959767.1|BI959767 HVSMEn0021F18f Hordeum vulgare rachi... 62 2e-008
gb|AL511829.1|AL511829 AL511829 Hordeum vulgare Barke devel... 54 4e-006
gb|AL512025.1|AL512025 AL512025 Hordeum vulgare Barke devel... 54 4e-006
gb|BF257421.2|BF257421 HVSMEf0012N20f Hordeum vulgare seedl... 54 4e-006
gb|AW982536.3|AW982536 HVSMEg0003I12f Hordeum vulgare pre-a... 54 4e-006
gb|AV920851.1|AV920851 AV920851 K. Sato unpublished cDNA li... 54 4e-006
gb|AV921149.1|AV921149 AV921149 K. Sato unpublished cDNA li... 54 4e-006
gb|AV921164.1|AV921164 AV921164 K. Sato unpublished cDNA li... 54 4e-006
gb|BJ466501.1|BJ466501 BJ466501 K. Sato unpublished cDNA li... 54 4e-006
gb|BJ467846.1|BJ467846 BJ467846 K. Sato unpublished cDNA li... 54 4e-006
gb|BQ459760.1|BQ459760 HA08C16r HA Hordeum vulgare subsp. v... 54 4e-006
gb|BQ657495.1|BQ657495 HA08C16u HA Hordeum vulgare subsp. v... 54 4e-006
gb|BQ766482.1|BQ766482 EBro08_SQ006_N06_R root, 3 week, dro... 54 4e-006
gb|BU967567.1|BU967567 HB04L04r BC Hordeum vulgare subsp. v... 54 4e-006
gb|BU983739.1|BU983739 HA30O06r HA Hordeum vulgare subsp. v... 54 4e-006
gb|CV054745.1|CV054745 BNEL112h10 Barley EST endosperm libr... 54 4e-006
gb|BJ467113.1|BJ467113 BJ467113 K. Sato unpublished cDNA li... 48 3e-004
gb|CV063161.1|CV063161 BNEL87c6 Barley EST endosperm librar... 48 3e-004
gb|BE455861.3|BE455861 HVSMEg0015N13f Hordeum vulgare pre-a... 46 0.001
gb|BF253761.2|BF253761 HVSMEf0002A22f Hordeum vulgare seedl... 42 0.017
gb|BG366517.2|BG366517 HVSMEi0007F05f Hordeum vulgare 20 DA... 40 0.066
gb|BM368801.1|BM368801 EBem08_SQ004_K07_R embryo, 40 DPA, n... 40 0.066
gb|BM369464.1|BM369464 EBem07_SQ003_K15_R embryo, 28 DPA, n... 40 0.066
gb|BM444605.1|BM444605 EBem09_SQ005_N24_R embryo, 1 Day ger... 40 0.066
gb|BM444803.1|BM444803 EBem09_SQ006_I10_R embryo, 1 Day ger... 40 0.066
gb|BQ467730.1|BQ467730 HS04L05r HS Hordeum vulgare subsp. v... 40 0.066
gb|BQ740127.1|BQ740127 HC108F01 HC Hordeum vulgare subsp. v... 40 0.066
gb|BI780447.2|BI780447 EBem08_SQ001_C14_R embryo, 40 DPA, n... 40 0.066
gb|BM368704.2|BM368704 EBem08_SQ004_G02_R embryo, 40 DPA, n... 40 0.066
gb|BM443675.2|BM443675 EBem09_SQ001_C02_R embryo, 1 Day ger... 40 0.066
gb|BQ757037.1|BQ757037 EBem10_SQ002_J13_R embryo, 2 Day ger... 40 0.066
gb|BQ757509.1|BQ757509 EBem10_SQ004_F16_R embryo, 2 Day ger... 40 0.066
gb|BQ757997.1|BQ757997 EBem10_SQ005_P11_R embryo, 2 Day ger... 40 0.066
gb|CA002664.1|CA002664 HS08C21r HS Hordeum vulgare subsp. v... 40 0.066
gb|CA002732.1|CA002732 HS08F21r HS Hordeum vulgare subsp. v... 40 0.066
gb|CA020181.1|CA020181 HV14J05r HV Hordeum vulgare subsp. v... 40 0.066
gb|BM444454.1|BM444454 EBem09_SQ005_E18_R embryo, 1 Day ger... 38 0.26
>gb|BF623132.1|BF623132 HVSMEa0014L04f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0014L04f, mRNA sequence
Length = 830
Score = 192 bits (97), Expect = 7e-048
Identities = 174/200 (87%)
Strand = Plus / Minus
Query: 262 gcgacggctggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacg 321
|||||||| ||||||||||||||||| ||||||||||||||||||| | |||||||| |
Sbjct: 474 gcgacggcgggcatgtccttgagccacccgtcgagcggcttgccgatggagtagacgatg 415
Query: 322 aagccgatctcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggct 381
||||||||||||| |||||| ||| |||||||||||||||||||||||||| ||||||
Sbjct: 414 aagccgatctccctgagcttctcggcgtcgacgacgttgcggccgtcgaagacgaaggcc 355
Query: 382 ggcttgtgcatggcgtcgaacatgcgcttgtagtcgagcgtcctgaattcgtcccactcg 441
||||| |||||| |||||| || ||||||||| |||| | |||| |||| |||||||
Sbjct: 354 ggcttctgcatgttgtcgaagatcttcttgtagtccagcgacttgaactcgttccactcg 295
Query: 442 gcgaggatgcagacggcgtg 461
| ||||||||| ||||||||
Sbjct: 294 gtgaggatgcacacggcgtg 275
>gb|AV909356.1|AV909356 AV909356 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak12i15 5', mRNA sequence
Length = 662
Score = 192 bits (97), Expect = 7e-048
Identities = 174/200 (87%)
Strand = Plus / Minus
Query: 262 gcgacggctggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacg 321
|||||||| ||||||||||||||||| ||||||||||||||||||| | |||||||| |
Sbjct: 288 gcgacggcgggcatgtccttgagccacccgtcgagcggcttgccgatggagtagacgatg 229
Query: 322 aagccgatctcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggct 381
||||||||||||| |||||| ||| |||||||||||||||||||||||||| ||||||
Sbjct: 228 aagccgatctccctgagcttctcggcgtcgacgacgttgcggccgtcgaagacgaaggcc 169
Query: 382 ggcttgtgcatggcgtcgaacatgcgcttgtagtcgagcgtcctgaattcgtcccactcg 441
||||| |||||| |||||| || ||||||||| |||| | |||| |||| |||||||
Sbjct: 168 ggcttctgcatgttgtcgaagatcttcttgtagtccagcgacttgaactcgttccactcg 109
Query: 442 gcgaggatgcagacggcgtg 461
| ||||||||| ||||||||
Sbjct: 108 gtgaggatgcacacggcgtg 89
>gb|AV911246.1|AV911246 AV911246 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak12i15 3', mRNA sequence
Length = 606
Score = 192 bits (97), Expect = 7e-048
Identities = 174/200 (87%)
Strand = Plus / Plus
Query: 262 gcgacggctggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacg 321
|||||||| ||||||||||||||||| ||||||||||||||||||| | |||||||| |
Sbjct: 339 gcgacggcgggcatgtccttgagccacccgtcgagcggcttgccgatggagtagacgatg 398
Query: 322 aagccgatctcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggct 381
||||||||||||| |||||| ||| |||||||||||||||||||||||||| ||||||
Sbjct: 399 aagccgatctccctgagcttctcggcgtcgacgacgttgcggccgtcgaagacgaaggcc 458
Query: 382 ggcttgtgcatggcgtcgaacatgcgcttgtagtcgagcgtcctgaattcgtcccactcg 441
||||| |||||| |||||| || ||||||||| |||| | |||| |||| |||||||
Sbjct: 459 ggcttctgcatgttgtcgaagatcttcttgtagtccagcgacttgaactcgttccactcg 518
Query: 442 gcgaggatgcagacggcgtg 461
| ||||||||| ||||||||
Sbjct: 519 gtgaggatgcacacggcgtg 538
>gb|AV920622.1|AV920622 AV920622 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags14o14 3', mRNA sequence
Length = 708
Score = 192 bits (97), Expect = 7e-048
Identities = 174/200 (87%)
Strand = Plus / Plus
Query: 262 gcgacggctggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacg 321
|||||||| ||||||||||||||||| ||||||||||||||||||| | |||||||| |
Sbjct: 379 gcgacggcgggcatgtccttgagccacccgtcgagcggcttgccgatggagtagacgatg 438
Query: 322 aagccgatctcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggct 381
||||||||||||| |||||| ||| |||||||||||||||||||||||||| ||||||
Sbjct: 439 aagccgatctccctgagcttctcggcgtcgacgacgttgcggccgtcgaagacgaaggcc 498
Query: 382 ggcttgtgcatggcgtcgaacatgcgcttgtagtcgagcgtcctgaattcgtcccactcg 441
||||| |||||| |||||| || ||||||||| |||| | |||| |||| |||||||
Sbjct: 499 ggcttctgcatgttgtcgaagatcttcttgtagtccagcgacttgaactcgttccactcg 558
Query: 442 gcgaggatgcagacggcgtg 461
| ||||||||| ||||||||
Sbjct: 559 gtgaggatgcacacggcgtg 578
>gb|BM816266.1|BM816266 HC01H12_T3.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC01H12_T3.ab1 similar to Hydrogen
dehydrogenase,Phosphoglycerate dehydrogenase,Glucose
1-dehydrogenase,Hydrogenase,Cytochrome-c3
hydrogenase,GDP-mannose 6-dehydrogenase,UDP-glucose
6-dehydrogenase,Glycine dehydrogenase,Transferred entry:
1.18.99.1,, mRNA sequence
Length = 756
Score = 192 bits (97), Expect = 7e-048
Identities = 174/200 (87%)
Strand = Plus / Minus
Query: 262 gcgacggctggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacg 321
|||||||| ||||||||||||||||| ||||||||||||||||||| | |||||||| |
Sbjct: 517 gcgacggcgggcatgtccttgagccacccgtcgagcggcttgccgatggagtagacgatg 458
Query: 322 aagccgatctcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggct 381
||||||||||||| |||||| ||| |||||||||||||||||||||||||| ||||||
Sbjct: 457 aagccgatctccctgagcttctcggcgtcgacgacgttgcggccgtcgaagacgaaggcc 398
Query: 382 ggcttgtgcatggcgtcgaacatgcgcttgtagtcgagcgtcctgaattcgtcccactcg 441
||||| |||||| |||||| || ||||||||| |||| | |||| |||| |||||||
Sbjct: 397 ggcttctgcatgttgtcgaagatcttcttgtagtccagcgacttgaactcgttccactcg 338
Query: 442 gcgaggatgcagacggcgtg 461
| ||||||||| ||||||||
Sbjct: 337 gtgaggatgcacacggcgtg 318
>gb|BM816267.1|BM816267 HB105E10_SK.ab1 HB Hordeum vulgare subsp. vulgare cDNA clone
HB105E10_SK.ab1 similar to Hydrogen
dehydrogenase,Phosphoglycerate dehydrogenase,Glucose
1-dehydrogenase,Hydrogenase,Cytochrome-c3
hydrogenase,GDP-mannose 6-dehydrogenase,UDP-glucose
6-dehydrogenase,Glycine dehydrogenase,Transferred entry:
1.18.99.1,, mRNA sequence
Length = 878
Score = 192 bits (97), Expect = 7e-048
Identities = 174/200 (87%)
Strand = Plus / Minus
Query: 262 gcgacggctggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacg 321
|||||||| ||||||||||||||||| ||||||||||||||||||| | |||||||| |
Sbjct: 570 gcgacggcgggcatgtccttgagccacccgtcgagcggcttgccgatggagtagacgatg 511
Query: 322 aagccgatctcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggct 381
||||||||||||| |||||| ||| |||||||||||||||||||||||||| ||||||
Sbjct: 510 aagccgatctccctgagcttctcggcgtcgacgacgttgcggccgtcgaagacgaaggcc 451
Query: 382 ggcttgtgcatggcgtcgaacatgcgcttgtagtcgagcgtcctgaattcgtcccactcg 441
||||| |||||| |||||| || ||||||||| |||| | |||| |||| |||||||
Sbjct: 450 ggcttctgcatgttgtcgaagatcttcttgtagtccagcgacttgaactcgttccactcg 391
Query: 442 gcgaggatgcagacggcgtg 461
| ||||||||| ||||||||
Sbjct: 390 gtgaggatgcacacggcgtg 371
>gb|AJ463225.1|AJ463225 AJ463225 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200034H12F2, mRNA sequence
Length = 420
Score = 192 bits (97), Expect = 7e-048
Identities = 174/200 (87%)
Strand = Plus / Minus
Query: 262 gcgacggctggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacg 321
|||||||| ||||||||||||||||| ||||||||||||||||||| | |||||||| |
Sbjct: 224 gcgacggcgggcatgtccttgagccacccgtcgagcggcttgccgatggagtagacgatg 165
Query: 322 aagccgatctcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggct 381
||||||||||||| |||||| ||| |||||||||||||||||||||||||| ||||||
Sbjct: 164 aagccgatctccctgagcttctcggcgtcgacgacgttgcggccgtcgaagacgaaggcc 105
Query: 382 ggcttgtgcatggcgtcgaacatgcgcttgtagtcgagcgtcctgaattcgtcccactcg 441
||||| |||||| |||||| || ||||||||| |||| | |||| |||| |||||||
Sbjct: 104 ggcttctgcatgttgtcgaagatcttcttgtagtccagcgacttgaactcgttccactcg 45
Query: 442 gcgaggatgcagacggcgtg 461
| ||||||||| ||||||||
Sbjct: 44 gtgaggatgcacacggcgtg 25
>gb|BJ467893.1|BJ467893 BJ467893 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags30d14 3', mRNA sequence
Length = 607
Score = 192 bits (97), Expect = 7e-048
Identities = 174/200 (87%)
Strand = Plus / Plus
Query: 262 gcgacggctggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacg 321
|||||||| ||||||||||||||||| ||||||||||||||||||| | |||||||| |
Sbjct: 366 gcgacggcgggcatgtccttgagccacccgtcgagcggcttgccgatggagtagacgatg 425
Query: 322 aagccgatctcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggct 381
||||||||||||| |||||| ||| |||||||||||||||||||||||||| ||||||
Sbjct: 426 aagccgatctccctgagcttctcggcgtcgacgacgttgcggccgtcgaagacgaaggcc 485
Query: 382 ggcttgtgcatggcgtcgaacatgcgcttgtagtcgagcgtcctgaattcgtcccactcg 441
||||| |||||| |||||| || ||||||||| |||| | |||| |||| |||||||
Sbjct: 486 ggcttctgcatgttgtcgaagatcttcttgtagtccagcgacttgaactcgttccactcg 545
Query: 442 gcgaggatgcagacggcgtg 461
| ||||||||| ||||||||
Sbjct: 546 gtgaggatgcacacggcgtg 565
>gb|BQ463470.1|BQ463470 HI05G01r HI Hordeum vulgare subsp. vulgare cDNA clone HI05G01
5-PRIME, mRNA sequence
Length = 478
Score = 192 bits (97), Expect = 7e-048
Identities = 174/200 (87%)
Strand = Plus / Minus
Query: 262 gcgacggctggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacg 321
|||||||| ||||||||||||||||| ||||||||||||||||||| | |||||||| |
Sbjct: 340 gcgacggcgggcatgtccttgagccacccgtcgagcggcttgccgatggagtagacgatg 281
Query: 322 aagccgatctcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggct 381
||||||||||||| |||||| ||| |||||||||||||||||||||||||| ||||||
Sbjct: 280 aagccgatctccctgagcttctcggcgtcgacgacgttgcggccgtcgaagacgaaggcc 221
Query: 382 ggcttgtgcatggcgtcgaacatgcgcttgtagtcgagcgtcctgaattcgtcccactcg 441
||||| |||||| |||||| || ||||||||| |||| | |||| |||| |||||||
Sbjct: 220 ggcttctgcatgttgtcgaagatcttcttgtagtccagcgacttgaactcgttccactcg 161
Query: 442 gcgaggatgcagacggcgtg 461
| ||||||||| ||||||||
Sbjct: 160 gtgaggatgcacacggcgtg 141
>gb|BQ662350.1|BQ662350 HS01P12w HS Hordeum vulgare subsp. vulgare cDNA clone HS01P12
3-PRIME, mRNA sequence
Length = 653
Score = 192 bits (97), Expect = 7e-048
Identities = 174/200 (87%)
Strand = Plus / Plus
Query: 262 gcgacggctggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacg 321
|||||||| ||||||||||||||||| ||||||||||||||||||| | |||||||| |
Sbjct: 342 gcgacggcgggcatgtccttgagccacccgtcgagcggcttgccgatggagtagacgatg 401
Query: 322 aagccgatctcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggct 381
||||||||||||| |||||| ||| |||||||||||||||||||||||||| ||||||
Sbjct: 402 aagccgatctccctgagcttctcggcgtcgacgacgttgcggccgtcgaagacgaaggcc 461
Query: 382 ggcttgtgcatggcgtcgaacatgcgcttgtagtcgagcgtcctgaattcgtcccactcg 441
||||| |||||| |||||| || ||||||||| |||| | |||| |||| |||||||
Sbjct: 462 ggcttctgcatgttgtcgaagatcttcttgtagtccagcgacttgaactcgttccactcg 521
Query: 442 gcgaggatgcagacggcgtg 461
| ||||||||| ||||||||
Sbjct: 522 gtgaggatgcacacggcgtg 541
>gb|BM370842.2|BM370842 EBro04_SQ002_H20_R root, 3 week, salt-stressed, cv Optic, EBro04
Hordeum vulgare subsp. vulgare cDNA clone
EBro04_SQ002_H20 5', mRNA sequence
Length = 650
Score = 192 bits (97), Expect = 7e-048
Identities = 174/200 (87%)
Strand = Plus / Minus
Query: 262 gcgacggctggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacg 321
|||||||| ||||||||||||||||| ||||||||||||||||||| | |||||||| |
Sbjct: 583 gcgacggcgggcatgtccttgagccacccgtcgagcggcttgccgatggagtagacgatg 524
Query: 322 aagccgatctcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggct 381
||||||||||||| |||||| ||| |||||||||||||||||||||||||| ||||||
Sbjct: 523 aagccgatctccctgagcttctcggcgtcgacgacgttgcggccgtcgaagacgaaggcc 464
Query: 382 ggcttgtgcatggcgtcgaacatgcgcttgtagtcgagcgtcctgaattcgtcccactcg 441
||||| |||||| |||||| || ||||||||| |||| | |||| |||| |||||||
Sbjct: 463 ggcttctgcatgttgtcgaagatcttcttgtagtccagcgacttgaactcgttccactcg 404
Query: 442 gcgaggatgcagacggcgtg 461
| ||||||||| ||||||||
Sbjct: 403 gtgaggatgcacacggcgtg 384
>gb|BQ756731.1|BQ756731 EBem09_SQ003_J13_R embryo, 1 Day germination, no treatment, cv
Optic, EBem09 Hordeum vulgare subsp. vulgare cDNA clone
EBem09_SQ003_J13 5', mRNA sequence
Length = 484
Score = 192 bits (97), Expect = 7e-048
Identities = 174/200 (87%)
Strand = Plus / Minus
Query: 262 gcgacggctggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacg 321
|||||||| ||||||||||||||||| ||||||||||||||||||| | |||||||| |
Sbjct: 339 gcgacggcgggcatgtccttgagccacccgtcgagcggcttgccgatggagtagacgatg 280
Query: 322 aagccgatctcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggct 381
||||||||||||| |||||| ||| |||||||||||||||||||||||||| ||||||
Sbjct: 279 aagccgatctccctgagcttctcggcgtcgacgacgttgcggccgtcgaagacgaaggcc 220
Query: 382 ggcttgtgcatggcgtcgaacatgcgcttgtagtcgagcgtcctgaattcgtcccactcg 441
||||| |||||| |||||| || ||||||||| |||| | |||| |||| |||||||
Sbjct: 219 ggcttctgcatgttgtcgaagatcttcttgtagtccagcgacttgaactcgttccactcg 160
Query: 442 gcgaggatgcagacggcgtg 461
| ||||||||| ||||||||
Sbjct: 159 gtgaggatgcacacggcgtg 140
>gb|BQ762433.1|BQ762433 EBro01_SQ005_H19_R root, 3 week, hydroponic grown, no treatment, cv
Optic, EBro01 Hordeum vulgare subsp. vulgare cDNA clone
EBro01_SQ005_H19 5', mRNA sequence
Length = 528
Score = 192 bits (97), Expect = 7e-048
Identities = 174/200 (87%)
Strand = Plus / Minus
Query: 262 gcgacggctggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacg 321
|||||||| ||||||||||||||||| ||||||||||||||||||| | |||||||| |
Sbjct: 256 gcgacggcgggcatgtccttgagccacccgtcgagcggcttgccgatggagtagacgatg 197
Query: 322 aagccgatctcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggct 381
||||||||||||| |||||| ||| |||||||||||||||||||||||||| ||||||
Sbjct: 196 aagccgatctccctgagcttctcggcgtcgacgacgttgcggccgtcgaagacgaaggcc 137
Query: 382 ggcttgtgcatggcgtcgaacatgcgcttgtagtcgagcgtcctgaattcgtcccactcg 441
||||| |||||| |||||| || ||||||||| |||| | |||| |||| |||||||
Sbjct: 136 ggcttctgcatgttgtcgaagatcttcttgtagtccagcgacttgaactcgttccactcg 77
Query: 442 gcgaggatgcagacggcgtg 461
| ||||||||| ||||||||
Sbjct: 76 gtgaggatgcacacggcgtg 57
>gb|BQ768330.1|BQ768330 EBro08_SQ011_L11_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ011_L11 5', mRNA sequence
Length = 570
Score = 192 bits (97), Expect = 7e-048
Identities = 174/200 (87%)
Strand = Plus / Minus
Query: 262 gcgacggctggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacg 321
|||||||| ||||||||||||||||| ||||||||||||||||||| | |||||||| |
Sbjct: 502 gcgacggcgggcatgtccttgagccacccgtcgagcggcttgccgatggagtagacgatg 443
Query: 322 aagccgatctcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggct 381
||||||||||||| |||||| ||| |||||||||||||||||||||||||| ||||||
Sbjct: 442 aagccgatctccctgagcttctcggcgtcgacgacgttgcggccgtcgaagacgaaggcc 383
Query: 382 ggcttgtgcatggcgtcgaacatgcgcttgtagtcgagcgtcctgaattcgtcccactcg 441
||||| |||||| |||||| || ||||||||| |||| | |||| |||| |||||||
Sbjct: 382 ggcttctgcatgttgtcgaagatcttcttgtagtccagcgacttgaactcgttccactcg 323
Query: 442 gcgaggatgcagacggcgtg 461
| ||||||||| ||||||||
Sbjct: 322 gtgaggatgcacacggcgtg 303
>gb|BU983773.1|BU983773 HA31A05r HA Hordeum vulgare subsp. vulgare cDNA clone HA31A05
5-PRIME, mRNA sequence
Length = 572
Score = 192 bits (97), Expect = 7e-048
Identities = 174/200 (87%)
Strand = Plus / Minus
Query: 262 gcgacggctggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacg 321
|||||||| ||||||||||||||||| ||||||||||||||||||| | |||||||| |
Sbjct: 325 gcgacggcgggcatgtccttgagccacccgtcgagcggcttgccgatggagtagacgatg 266
Query: 322 aagccgatctcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggct 381
||||||||||||| |||||| ||| |||||||||||||||||||||||||| ||||||
Sbjct: 265 aagccgatctccctgagcttctcggcgtcgacgacgttgcggccgtcgaagacgaaggcc 206
Query: 382 ggcttgtgcatggcgtcgaacatgcgcttgtagtcgagcgtcctgaattcgtcccactcg 441
||||| |||||| |||||| || ||||||||| |||| | |||| |||| |||||||
Sbjct: 205 ggcttctgcatgttgtcgaagatcttcttgtagtccagcgacttgaactcgttccactcg 146
Query: 442 gcgaggatgcagacggcgtg 461
| ||||||||| ||||||||
Sbjct: 145 gtgaggatgcacacggcgtg 126
>gb|BU984019.1|BU984019 HA31L23r HA Hordeum vulgare subsp. vulgare cDNA clone HA31L23
5-PRIME, mRNA sequence
Length = 565
Score = 192 bits (97), Expect = 7e-048
Identities = 174/200 (87%)
Strand = Plus / Minus
Query: 262 gcgacggctggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacg 321
|||||||| ||||||||||||||||| ||||||||||||||||||| | |||||||| |
Sbjct: 325 gcgacggcgggcatgtccttgagccacccgtcgagcggcttgccgatggagtagacgatg 266
Query: 322 aagccgatctcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggct 381
||||||||||||| |||||| ||| |||||||||||||||||||||||||| ||||||
Sbjct: 265 aagccgatctccctgagcttctcggcgtcgacgacgttgcggccgtcgaagacgaaggcc 206
Query: 382 ggcttgtgcatggcgtcgaacatgcgcttgtagtcgagcgtcctgaattcgtcccactcg 441
||||| |||||| |||||| || ||||||||| |||| | |||| |||| |||||||
Sbjct: 205 ggcttctgcatgttgtcgaagatcttcttgtagtccagcgacttgaactcgttccactcg 146
Query: 442 gcgaggatgcagacggcgtg 461
| ||||||||| ||||||||
Sbjct: 145 gtgaggatgcacacggcgtg 126
>gb|BU994116.1|BU994116 HM05M18r HM Hordeum vulgare subsp. vulgare cDNA clone HM05M18
5-PRIME, mRNA sequence
Length = 497
Score = 192 bits (97), Expect = 7e-048
Identities = 174/200 (87%)
Strand = Plus / Minus
Query: 262 gcgacggctggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacg 321
|||||||| ||||||||||||||||| ||||||||||||||||||| | |||||||| |
Sbjct: 323 gcgacggcgggcatgtccttgagccacccgtcgagcggcttgccgatggagtagacgatg 264
Query: 322 aagccgatctcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggct 381
||||||||||||| |||||| ||| |||||||||||||||||||||||||| ||||||
Sbjct: 263 aagccgatctccctgagcttctcggcgtcgacgacgttgcggccgtcgaagacgaaggcc 204
Query: 382 ggcttgtgcatggcgtcgaacatgcgcttgtagtcgagcgtcctgaattcgtcccactcg 441
||||| |||||| |||||| || ||||||||| |||| | |||| |||| |||||||
Sbjct: 203 ggcttctgcatgttgtcgaagatcttcttgtagtccagcgacttgaactcgttccactcg 144
Query: 442 gcgaggatgcagacggcgtg 461
| ||||||||| ||||||||
Sbjct: 143 gtgaggatgcacacggcgtg 124
>gb|CB880777.1|CB880777 HM07M18w HM Hordeum vulgare subsp. vulgare cDNA clone HM07M18
3-PRIME, mRNA sequence
Length = 614
Score = 192 bits (97), Expect = 7e-048
Identities = 174/200 (87%)
Strand = Plus / Plus
Query: 262 gcgacggctggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacg 321
|||||||| ||||||||||||||||| ||||||||||||||||||| | |||||||| |
Sbjct: 391 gcgacggcgggcatgtccttgagccacccgtcgagcggcttgccgatggagtagacgatg 450
Query: 322 aagccgatctcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggct 381
||||||||||||| |||||| ||| |||||||||||||||||||||||||| ||||||
Sbjct: 451 aagccgatctccctgagcttctcggcgtcgacgacgttgcggccgtcgaagacgaaggcc 510
Query: 382 ggcttgtgcatggcgtcgaacatgcgcttgtagtcgagcgtcctgaattcgtcccactcg 441
||||| |||||| |||||| || ||||||||| |||| | |||| |||| |||||||
Sbjct: 511 ggcttctgcatgttgtcgaagatcttcttgtagtccagcgacttgaactcgttccactcg 570
Query: 442 gcgaggatgcagacggcgtg 461
| ||||||||| ||||||||
Sbjct: 571 gtgaggatgcacacggcgtg 590
>gb|AV915524.1|AV915524 AV915524 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags14o14 5', mRNA sequence
Length = 621
Score = 182 bits (92), Expect = 7e-045
Identities = 166/191 (86%)
Strand = Plus / Minus
Query: 271 ggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacgaagccgatc 330
||||||||||||||||| ||||||||||||||||||| | |||||||| ||||||||||
Sbjct: 601 ggcatgtccttgagccacccgtcgagcggcttgccgatggagtagacgatgaagccgatc 542
Query: 331 tcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggctggcttgtgc 390
|||| |||||| ||| |||||||||||||||||||||||||| |||||| ||||| |||
Sbjct: 541 tccctgagcttctcggcgtcgacgacgttgcggccgtcgaagacgaaggccggcttctgc 482
Query: 391 atggcgtcgaacatgcgcttgtagtcgagcgtcctgaattcgtcccactcggcgaggatg 450
||| |||||| || ||||||||| |||| | |||| |||| |||||||| |||||||
Sbjct: 481 atgttgtcgaagatcttcttgtagtccagcgacttgaactcgttccactcggtgaggatg 422
Query: 451 cagacggcgtg 461
|| ||||||||
Sbjct: 421 cacacggcgtg 411
>gb|AL500306.1|AL500306 AL500306 Hordeum vulgare Barke etiolated leaves Hordeum vulgare
subsp. vulgare cDNA clone HK06A01r 3', mRNA sequence
Length = 395
Score = 161 bits (81), Expect = 3e-038
Identities = 119/132 (90%)
Strand = Plus / Plus
Query: 262 gcgacggctggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacg 321
|||||||| ||||||||||||||||| ||||||||||||||||||| | |||||||| |
Sbjct: 264 gcgacggcgggcatgtccttgagccacccgtcgagcggcttgccgatggagtagacgatg 323
Query: 322 aagccgatctcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggct 381
||||||||||||| |||||| ||| |||||||||||||||||||||||||| ||||||
Sbjct: 324 aagccgatctccctgagcttctcggcgtcgacgacgttgcggccgtcgaagacgaaggcc 383
Query: 382 ggcttgtgcatg 393
||||| ||||||
Sbjct: 384 ggcttctgcatg 395
>gb|BU994867.1|BU994867 HM08H04r HM Hordeum vulgare subsp. vulgare cDNA clone HM08H04
5-PRIME, mRNA sequence
Length = 375
Score = 161 bits (81), Expect = 3e-038
Identities = 119/132 (90%)
Strand = Plus / Minus
Query: 262 gcgacggctggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacg 321
|||||||| ||||||||||||||||| ||||||||||||||||||| | |||||||| |
Sbjct: 202 gcgacggcgggcatgtccttgagccacccgtcgagcggcttgccgatggagtagacgatg 143
Query: 322 aagccgatctcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggct 381
||||||||||||| |||||| ||| |||||||||||||||||||||||||| ||||||
Sbjct: 142 aagccgatctccctgagcttctcggcgtcgacgacgttgcggccgtcgaagacgaaggcc 83
Query: 382 ggcttgtgcatg 393
||||| ||||||
Sbjct: 82 ggcttctgcatg 71
>gb|CB880990.1|CB880990 HM08H04w HM Hordeum vulgare subsp. vulgare cDNA clone HM08H04
3-PRIME, mRNA sequence
Length = 528
Score = 161 bits (81), Expect = 3e-038
Identities = 119/132 (90%)
Strand = Plus / Plus
Query: 262 gcgacggctggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacg 321
|||||||| ||||||||||||||||| ||||||||||||||||||| | |||||||| |
Sbjct: 391 gcgacggcgggcatgtccttgagccacccgtcgagcggcttgccgatggagtagacgatg 450
Query: 322 aagccgatctcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggct 381
||||||||||||| |||||| ||| |||||||||||||||||||||||||| ||||||
Sbjct: 451 aagccgatctccctgagcttctcggcgtcgacgacgttgcggccgtcgaagacgaaggcc 510
Query: 382 ggcttgtgcatg 393
||||| ||||||
Sbjct: 511 ggcttctgcatg 522
>gb|CB858524.1|CB858524 HI07F20w HI Hordeum vulgare subsp. vulgare cDNA clone HI07F20
3-PRIME, mRNA sequence
Length = 504
Score = 155 bits (78), Expect = 2e-036
Identities = 113/125 (90%)
Strand = Plus / Plus
Query: 262 gcgacggctggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacg 321
|||||||| ||||||||||||||||| ||||||||||||||||||| | |||||||| |
Sbjct: 376 gcgacggcgggcatgtccttgagccacccgtcgagcggcttgccgatggagtagacgatg 435
Query: 322 aagccgatctcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggct 381
||||||||||||| |||||| ||| |||||||||||||||||||||||||| ||||||
Sbjct: 436 aagccgatctccctgagcttctcggcgtcgacgacgttgcggccgtcgaagacgaaggcc 495
Query: 382 ggctt 386
|||||
Sbjct: 496 ggctt 500
>gb|BM370864.2|BM370864 EBro04_SQ002_J12_R root, 3 week, salt-stressed, cv Optic, EBro04
Hordeum vulgare subsp. vulgare cDNA clone
EBro04_SQ002_J12 5', mRNA sequence
Length = 521
Score = 151 bits (76), Expect = 3e-035
Identities = 108/119 (90%)
Strand = Plus / Minus
Query: 262 gcgacggctggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacg 321
|||||||| ||||||||||||||||| ||||||||||||||||||| | |||||||| |
Sbjct: 122 gcgacggcgggcatgtccttgagccacccgtcgagcggcttgccgatggagtagacgatg 63
Query: 322 aagccgatctcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggc 380
||||||||||||| |||||| ||| |||||||||||||||||||||||||| ||||||
Sbjct: 62 aagccgatctccctgagcttctcggcgtcgacgacgttgcggccgtcgaagacgaaggc 4
>gb|BM370810.2|BM370810 EBro04_SQ002_F16_R root, 3 week, salt-stressed, cv Optic, EBro04
Hordeum vulgare subsp. vulgare cDNA clone
EBro04_SQ002_F16 5', mRNA sequence
Length = 490
Score = 133 bits (67), Expect = 6e-030
Identities = 129/150 (86%)
Strand = Plus / Minus
Query: 312 gtagacgacgaagccgatctcccggagcttggcggngtcgacgacgttgcggccgtcgaa 371
|||||||| |||||||||||||| |||||| ||| ||||||||||||||||||||||||
Sbjct: 484 gtagacgatgaagccgatctccctgagcttctcggcgtcgacgacgttgcggccgtcgaa 425
Query: 372 gatgaaggctggcttgtgcatggcgtcgaacatgcgcttgtagtcgagcgtcctgaattc 431
|| |||||| ||||| |||||| |||||| || ||||||||| |||| | |||| ||
Sbjct: 424 gacgaaggccggcttctgcatgttgtcgaagatcttcttgtagtccagcgacttgaactc 365
Query: 432 gtcccactcggcgaggatgcagacggcgtg 461
|| |||||||| ||||||||| ||||||||
Sbjct: 364 gttccactcggtgaggatgcacacggcgtg 335
>gb|BI959146.1|BI959146 HVSMEn0018G05f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0018G05f, mRNA sequence
Length = 663
Score = 125 bits (63), Expect = 1e-027
Identities = 98/110 (89%)
Strand = Plus / Plus
Query: 262 gcgacggctggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacg 321
|||||||| ||||||||||||||||| ||||||||||||||||||| | ||| |||| |
Sbjct: 410 gcgacggcgggcatgtccttgagccacccgtcgagcggcttgccgatggagtaaacgatg 469
Query: 322 aagccgatctcccggagcttggcggngtcgacgacgttgcggccgtcgaa 371
||||||||||||| |||||| ||| |||||| |||||||||||||||||
Sbjct: 470 aagccgatctccctgagcttctcggcgtcgacaacgttgcggccgtcgaa 519
>gb|BF259284.2|BF259284 HVSMEf0018M04f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0018M04f, mRNA sequence
Length = 786
Score = 121 bits (61), Expect = 2e-026
Identities = 99/112 (88%)
Strand = Plus / Minus
Query: 262 gcgacggctggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacg 321
|||||||| ||||||||||||| ||| ||||||||||||||||||| |||||||| |
Sbjct: 403 gcgacggcgggcatgtccttgatccacccgtcgagcggcttgccgatgtagtagacgatg 344
Query: 322 aagccgatctcccggagcttggcggngtcgacgacgttgcggccgtcgaaga 373
||||||||||||| |||||| ||| |||||||||||||||||||| |||||
Sbjct: 343 aagccgatctccctgagcttctcggcgtcgacgacgttgcggccgtagaaga 292
>gb|AL500754.1|AL500754 AL500754 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW01M02u 3', mRNA sequence
Length = 582
Score = 119 bits (60), Expect = 9e-026
Identities = 107/123 (86%)
Strand = Plus / Plus
Query: 271 ggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacgaagccgatc 330
||||||||||||||||| | ||||||||||||||||| | |||||| | |||||| |||
Sbjct: 274 ggcatgtccttgagccacgcatcgagcggcttgccgatggagtagacaatgaagccaatc 333
Query: 331 tcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggctggcttgtgc 390
|||| ||||||| ||| || |||||||||||| |||||||||| |||||| ||||| |||
Sbjct: 334 tccctgagcttgtcggcgttgacgacgttgcgcccgtcgaagacgaaggccggcttctgc 393
Query: 391 atg 393
|||
Sbjct: 394 atg 396
>gb|AL502363.1|AL502363 AL502363 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW07F10u 3', mRNA sequence
Length = 598
Score = 119 bits (60), Expect = 9e-026
Identities = 107/123 (86%)
Strand = Plus / Plus
Query: 271 ggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacgaagccgatc 330
||||||||||||||||| | ||||||||||||||||| | |||||| | |||||| |||
Sbjct: 255 ggcatgtccttgagccacgcatcgagcggcttgccgatggagtagacaatgaagccaatc 314
Query: 331 tcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggctggcttgtgc 390
|||| ||||||| ||| || |||||||||||| |||||||||| |||||| ||||| |||
Sbjct: 315 tccctgagcttgtcggcgttgacgacgttgcgcccgtcgaagacgaaggccggcttctgc 374
Query: 391 atg 393
|||
Sbjct: 375 atg 377
>gb|AL510412.1|AL510412 AL510412 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY04N13u 3',
mRNA sequence
Length = 668
Score = 119 bits (60), Expect = 9e-026
Identities = 107/123 (86%)
Strand = Plus / Plus
Query: 271 ggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacgaagccgatc 330
||||||||||||||||| | ||||||||||||||||| | |||||| | |||||| |||
Sbjct: 257 ggcatgtccttgagccacgcatcgagcggcttgccgatggagtagacaatgaagccaatc 316
Query: 331 tcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggctggcttgtgc 390
|||| ||||||| ||| || |||||||||||| |||||||||| |||||| ||||| |||
Sbjct: 317 tccctgagcttgtcggcgttgacgacgttgcgcccgtcgaagacgaaggccggcttctgc 376
Query: 391 atg 393
|||
Sbjct: 377 atg 379
>gb|BI958137.1|BI958137 HVSMEn0013J09f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0013J09f, mRNA sequence
Length = 884
Score = 119 bits (60), Expect = 9e-026
Identities = 107/123 (86%)
Strand = Plus / Plus
Query: 271 ggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacgaagccgatc 330
||||||||||||||||| | ||||||||||||||||| | |||||| | |||||| |||
Sbjct: 261 ggcatgtccttgagccacgcatcgagcggcttgccgatggagtagacaatgaagccaatc 320
Query: 331 tcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggctggcttgtgc 390
|||| ||||||| ||| || |||||||||||| |||||||||| |||||| ||||| |||
Sbjct: 321 tccctgagcttgtcggcgttgacgacgttgcgcccgtcgaagacgaaggccggcttctgc 380
Query: 391 atg 393
|||
Sbjct: 381 atg 383
>gb|BI958959.1|BI958959 HVSMEn0017G17f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0017G17f, mRNA sequence
Length = 633
Score = 119 bits (60), Expect = 9e-026
Identities = 107/123 (86%)
Strand = Plus / Minus
Query: 271 ggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacgaagccgatc 330
||||||||||||||||| | ||||||||||||||||| | |||||| | |||||| |||
Sbjct: 587 ggcatgtccttgagccacgcatcgagcggcttgccgatggagtagacaatgaagccaatc 528
Query: 331 tcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggctggcttgtgc 390
|||| ||||||| ||| || |||||||||||| |||||||||| |||||| ||||| |||
Sbjct: 527 tccctgagcttgtcggcgttgacgacgttgcgcccgtcgaagacgaaggccggcttctgc 468
Query: 391 atg 393
|||
Sbjct: 467 atg 465
>gb|BI959762.1|BI959762 HVSMEn0021F08f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0021F08f, mRNA sequence
Length = 644
Score = 119 bits (60), Expect = 9e-026
Identities = 107/123 (86%)
Strand = Plus / Minus
Query: 271 ggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacgaagccgatc 330
||||||||||||||||| | ||||||||||||||||| | |||||| | |||||| |||
Sbjct: 587 ggcatgtccttgagccacgcatcgagcggcttgccgatggagtagacaatgaagccaatc 528
Query: 331 tcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggctggcttgtgc 390
|||| ||||||| ||| || |||||||||||| |||||||||| |||||| ||||| |||
Sbjct: 527 tccctgagcttgtcggcgttgacgacgttgcgcccgtcgaagacgaaggccggcttctgc 468
Query: 391 atg 393
|||
Sbjct: 467 atg 465
>gb|AV914685.1|AV914685 AV914685 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags7j04 5', mRNA sequence
Length = 512
Score = 119 bits (60), Expect = 9e-026
Identities = 107/123 (86%)
Strand = Plus / Minus
Query: 271 ggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacgaagccgatc 330
||||||||||||||||| | ||||||||||||||||| | |||||| | |||||| |||
Sbjct: 250 ggcatgtccttgagccacgcatcgagcggcttgccgatggagtagacaatgaagccaatc 191
Query: 331 tcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggctggcttgtgc 390
|||| ||||||| ||| || |||||||||||| |||||||||| |||||| ||||| |||
Sbjct: 190 tccctgagcttgtcggcgttgacgacgttgcgcccgtcgaagacgaaggccggcttctgc 131
Query: 391 atg 393
|||
Sbjct: 130 atg 128
>gb|AV916593.1|AV916593 AV916593 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags17p02 5', mRNA sequence
Length = 521
Score = 119 bits (60), Expect = 9e-026
Identities = 107/123 (86%)
Strand = Plus / Minus
Query: 271 ggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacgaagccgatc 330
||||||||||||||||| | ||||||||||||||||| | |||||| | |||||| |||
Sbjct: 259 ggcatgtccttgagccacgcatcgagcggcttgccgatggagtagacaatgaagccaatc 200
Query: 331 tcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggctggcttgtgc 390
|||| ||||||| ||| || |||||||||||| |||||||||| |||||| ||||| |||
Sbjct: 199 tccctgagcttgtcggcgttgacgacgttgcgcccgtcgaagacgaaggccggcttctgc 140
Query: 391 atg 393
|||
Sbjct: 139 atg 137
>gb|AV917477.1|AV917477 AV917477 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags10b05 3', mRNA sequence
Length = 626
Score = 119 bits (60), Expect = 9e-026
Identities = 107/123 (86%)
Strand = Plus / Plus
Query: 271 ggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacgaagccgatc 330
||||||||||||||||| | ||||||||||||||||| | |||||| | |||||| |||
Sbjct: 336 ggcatgtccttgagccacgcatcgagcggcttgccgatggagtagacaatgaagccaatc 395
Query: 331 tcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggctggcttgtgc 390
|||| ||||||| ||| || |||||||||||| |||||||||| |||||| ||||| |||
Sbjct: 396 tccctgagcttgtcggcgttgacgacgttgcgcccgtcgaagacgaaggccggcttctgc 455
Query: 391 atg 393
|||
Sbjct: 456 atg 458
>gb|AV918120.1|AV918120 AV918120 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags17p02 3', mRNA sequence
Length = 477
Score = 119 bits (60), Expect = 9e-026
Identities = 107/123 (86%)
Strand = Plus / Plus
Query: 271 ggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacgaagccgatc 330
||||||||||||||||| | ||||||||||||||||| | |||||| | |||||| |||
Sbjct: 226 ggcatgtccttgagccacgcatcgagcggcttgccgatggagtagacaatgaagccaatc 285
Query: 331 tcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggctggcttgtgc 390
|||| ||||||| ||| || |||||||||||| |||||||||| |||||| ||||| |||
Sbjct: 286 tccctgagcttgtcggcgttgacgacgttgcgcccgtcgaagacgaaggccggcttctgc 345
Query: 391 atg 393
|||
Sbjct: 346 atg 348
>gb|AV918153.1|AV918153 AV918153 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20a23 3', mRNA sequence
Length = 631
Score = 119 bits (60), Expect = 9e-026
Identities = 107/123 (86%)
Strand = Plus / Plus
Query: 271 ggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacgaagccgatc 330
||||||||||||||||| | ||||||||||||||||| | |||||| | |||||| |||
Sbjct: 227 ggcatgtccttgagccacgcatcgagcggcttgccgatggagtagacaatgaagccaatc 286
Query: 331 tcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggctggcttgtgc 390
|||| ||||||| ||| || |||||||||||| |||||||||| |||||| ||||| |||
Sbjct: 287 tccctgagcttgtcggcgttgacgacgttgcgcccgtcgaagacgaaggccggcttctgc 346
Query: 391 atg 393
|||
Sbjct: 347 atg 349
>gb|AV919777.1|AV919777 AV919777 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags7j04 3', mRNA sequence
Length = 488
Score = 119 bits (60), Expect = 9e-026
Identities = 107/123 (86%)
Strand = Plus / Plus
Query: 271 ggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacgaagccgatc 330
||||||||||||||||| | ||||||||||||||||| | |||||| | |||||| |||
Sbjct: 238 ggcatgtccttgagccacgcatcgagcggcttgccgatggagtagacaatgaagccaatc 297
Query: 331 tcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggctggcttgtgc 390
|||| ||||||| ||| || |||||||||||| |||||||||| |||||| ||||| |||
Sbjct: 298 tccctgagcttgtcggcgttgacgacgttgcgcccgtcgaagacgaaggccggcttctgc 357
Query: 391 atg 393
|||
Sbjct: 358 atg 360
>gb|AV921737.1|AV921737 AV921737 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags12j07 3', mRNA sequence
Length = 409
Score = 119 bits (60), Expect = 9e-026
Identities = 107/123 (86%)
Strand = Plus / Plus
Query: 271 ggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacgaagccgatc 330
||||||||||||||||| | ||||||||||||||||| | |||||| | |||||| |||
Sbjct: 205 ggcatgtccttgagccacgcatcgagcggcttgccgatggagtagacaatgaagccaatc 264
Query: 331 tcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggctggcttgtgc 390
|||| ||||||| ||| || |||||||||||| |||||||||| |||||| ||||| |||
Sbjct: 265 tccctgagcttgtcggcgttgacgacgttgcgcccgtcgaagacgaaggccggcttctgc 324
Query: 391 atg 393
|||
Sbjct: 325 atg 327
>gb|BM816403.1|BM816403 HC108H05_SK.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC108H05_SK.ab1 similar to Hydrogen
dehydrogenase,Phosphoglycerate dehydrogenase,Glucose
1-dehydrogenase,Hydrogenase,Cytochrome-c3
hydrogenase,GDP-mannose 6-dehydrogenase,UDP-glucose
6-dehydrogenase,Glycine dehydrogenase,Transferred entry:
1.18.99.1,, mRNA sequence
Length = 886
Score = 119 bits (60), Expect = 9e-026
Identities = 107/123 (86%)
Strand = Plus / Minus
Query: 271 ggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacgaagccgatc 330
||||||||||||||||| | ||||||||||||||||| | |||||| | |||||| |||
Sbjct: 648 ggcatgtccttgagccacgcatcgagcggcttgccgatggagtagacaatgaagccaatc 589
Query: 331 tcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggctggcttgtgc 390
|||| ||||||| ||| || |||||||||||| |||||||||| |||||| ||||| |||
Sbjct: 588 tccctgagcttgtcggcgttgacgacgttgcgcccgtcgaagacgaaggccggcttctgc 529
Query: 391 atg 393
|||
Sbjct: 528 atg 526
>gb|AJ432034.1|AJ432034 AJ432034 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200029E07F1, mRNA sequence
Length = 639
Score = 119 bits (60), Expect = 9e-026
Identities = 107/123 (86%)
Strand = Plus / Minus
Query: 271 ggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacgaagccgatc 330
||||||||||||||||| | ||||||||||||||||| | |||||| | |||||| |||
Sbjct: 376 ggcatgtccttgagccacgcatcgagcggcttgccgatggagtagacaatgaagccaatc 317
Query: 331 tcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggctggcttgtgc 390
|||| ||||||| ||| || |||||||||||| |||||||||| |||||| ||||| |||
Sbjct: 316 tccctgagcttgtcggcgttgacgacgttgcgcccgtcgaagacgaaggccggcttctgc 257
Query: 391 atg 393
|||
Sbjct: 256 atg 254
>gb|BJ464194.1|BJ464194 BJ464194 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags33e10 5', mRNA sequence
Length = 534
Score = 119 bits (60), Expect = 9e-026
Identities = 107/123 (86%)
Strand = Plus / Minus
Query: 271 ggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacgaagccgatc 330
||||||||||||||||| | ||||||||||||||||| | |||||| | |||||| |||
Sbjct: 525 ggcatgtccttgagccacgcatcgagcggcttgccgatggagtagacaatgaagccaatc 466
Query: 331 tcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggctggcttgtgc 390
|||| ||||||| ||| || |||||||||||| |||||||||| |||||| ||||| |||
Sbjct: 465 tccctgagcttgtcggcgttgacgacgttgcgcccgtcgaagacgaaggccggcttctgc 406
Query: 391 atg 393
|||
Sbjct: 405 atg 403
>gb|BJ466653.1|BJ466653 BJ466653 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags33e10 3', mRNA sequence
Length = 650
Score = 119 bits (60), Expect = 9e-026
Identities = 107/123 (86%)
Strand = Plus / Plus
Query: 271 ggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacgaagccgatc 330
||||||||||||||||| | ||||||||||||||||| | |||||| | |||||| |||
Sbjct: 228 ggcatgtccttgagccacgcatcgagcggcttgccgatggagtagacaatgaagccaatc 287
Query: 331 tcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggctggcttgtgc 390
|||| ||||||| ||| || |||||||||||| |||||||||| |||||| ||||| |||
Sbjct: 288 tccctgagcttgtcggcgttgacgacgttgcgcccgtcgaagacgaaggccggcttctgc 347
Query: 391 atg 393
|||
Sbjct: 348 atg 350
>gb|BJ467967.1|BJ467967 BJ467967 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags30i06 3', mRNA sequence
Length = 661
Score = 119 bits (60), Expect = 9e-026
Identities = 107/123 (86%)
Strand = Plus / Plus
Query: 271 ggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacgaagccgatc 330
||||||||||||||||| | ||||||||||||||||| | |||||| | |||||| |||
Sbjct: 237 ggcatgtccttgagccacgcatcgagcggcttgccgatggagtagacaatgaagccaatc 296
Query: 331 tcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggctggcttgtgc 390
|||| ||||||| ||| || |||||||||||| |||||||||| |||||| ||||| |||
Sbjct: 297 tccctgagcttgtcggcgttgacgacgttgcgcccgtcgaagacgaaggccggcttctgc 356
Query: 391 atg 393
|||
Sbjct: 357 atg 359
>gb|BQ766369.1|BQ766369 EBro08_SQ005_E20_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ005_E20 5', mRNA sequence
Length = 405
Score = 119 bits (60), Expect = 9e-026
Identities = 107/123 (86%)
Strand = Plus / Minus
Query: 271 ggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacgaagccgatc 330
||||||||||||||||| | ||||||||||||||||| | |||||| | |||||| |||
Sbjct: 195 ggcatgtccttgagccacgcatcgagcggcttgccgatggagtagacaatgaagccaatc 136
Query: 331 tcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggctggcttgtgc 390
|||| ||||||| ||| || |||||||||||| |||||||||| |||||| ||||| |||
Sbjct: 135 tccctgagcttgtcggcgttgacgacgttgcgcccgtcgaagacgaaggccggcttctgc 76
Query: 391 atg 393
|||
Sbjct: 75 atg 73
>gb|BQ768409.1|BQ768409 EBro08_SQ011_K14_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ011_K14 5', mRNA sequence
Length = 610
Score = 119 bits (60), Expect = 9e-026
Identities = 107/123 (86%)
Strand = Plus / Minus
Query: 271 ggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacgaagccgatc 330
||||||||||||||||| | ||||||||||||||||| | |||||| | |||||| |||
Sbjct: 500 ggcatgtccttgagccacgcatcgagcggcttgccgatggagtagacaatgaagccaatc 441
Query: 331 tcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggctggcttgtgc 390
|||| ||||||| ||| || |||||||||||| |||||||||| |||||| ||||| |||
Sbjct: 440 tccctgagcttgtcggcgttgacgacgttgcgcccgtcgaagacgaaggccggcttctgc 381
Query: 391 atg 393
|||
Sbjct: 380 atg 378
>gb|CK122417.1|CK122417 BES1824103e24 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010E243 5-PRIME, mRNA sequence
Length = 616
Score = 117 bits (59), Expect = 3e-025
Identities = 120/141 (85%)
Strand = Plus / Minus
Query: 321 gaagccgatctcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggc 380
||||||||||||| |||||| ||| |||||||||||||||||||||||||| ||||||
Sbjct: 612 gaagccgatctccntgagcttctcggcgtcgacgacgttgcggccgtcgaagacgaaggc 553
Query: 381 tggcttgtgcatggcgtcgaacatgcgcttgtagtcgagcgtcctgaattcgtcccactc 440
||||| |||||| |||||| || ||||||||| |||| | |||| |||| ||||||
Sbjct: 552 cggcttctgcatgttgtcgaagatcttcttgtagtccagcgacttgaactcgttccactc 493
Query: 441 ggcgaggatgcagacggcgtg 461
|| ||||||||| ||||||||
Sbjct: 492 ggtgaggatgcacacggcgtg 472
>gb|AL509867.1|AL509867 AL509867 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY03B24u 3',
mRNA sequence
Length = 440
Score = 113 bits (57), Expect = 5e-024
Identities = 106/123 (86%)
Strand = Plus / Plus
Query: 271 ggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacgaagccgatc 330
||||||||||||||||| | ||||||||||||||||| | |||||| | |||||| |||
Sbjct: 243 ggcatgtccttgagccacgcatcgagcggcttgccgatggagtagacaatgaagccaatc 302
Query: 331 tcccggagcttggcggngtcgacgacgttgcggccgtcgaagatgaaggctggcttgtgc 390
|||| ||||||| ||| || |||||||||||| ||||||| || |||||| ||||| |||
Sbjct: 303 tccctgagcttgtcggcgttgacgacgttgcgcccgtcgangacgaaggccggcttctgc 362
Query: 391 atg 393
|||
Sbjct: 363 atg 365
>gb|AJ462404.1|AJ462404 AJ462404 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200080D10F1, mRNA sequence
Length = 300
Score = 105 bits (53), Expect = 1e-021
Identities = 82/92 (89%)
Strand = Plus / Minus
Query: 262 gcgacggctggcatgtccttgagccaatcgtcgagcggcttgccgatagcgtagacgacg 321
|||||||| ||||||||||||||||| ||||||||||||||||||| | |||||||| |
Sbjct: 92 gcgacggcgggcatgtccttgagccacccgtcgagcggcttgccgatggagtagacgatg 33
Query: 322 aagccgatctcccggagcttggcggngtcgac 353
||||||||||||| |||||| ||| ||||||
Sbjct: 32 aagccgatctccctgagcttctcggcgtcgac 1
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 48,093
Number of Sequences: 312970
Number of extensions: 48093
Number of successful extensions: 14704
Number of sequences better than 0.5: 95
Number of HSP's better than 0.5 without gapping: 95
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 14608
Number of HSP's gapped (non-prelim): 96
length of query: 487
length of database: 175,134,539
effective HSP length: 18
effective length of query: 469
effective length of database: 169,501,079
effective search space: 79496006051
effective search space used: 79496006051
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)