BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3561840.2.1
(1168 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BU979019.1|BU979019 HA14O21r HA Hordeum vulgare subsp. v... 484 e-135
gb|CA021258.1|CA021258 HZ39J06r HZ Hordeum vulgare subsp. v... 470 e-131
gb|BQ458971.1|BQ458971 HA02K21r HA Hordeum vulgare subsp. v... 460 e-128
gb|BU979487.1|BU979487 HA16F04r HA Hordeum vulgare subsp. v... 460 e-128
gb|CA025113.1|CA025113 HZ51D24r HZ Hordeum vulgare subsp. v... 385 e-105
gb|AL506475.1|AL506475 AL506475 Hordeum vulgare Barke devel... 244 5e-063
gb|BU995356.1|BU995356 HM09P23r HM Hordeum vulgare subsp. v... 244 5e-063
gb|BU995744.1|BU995744 HM11D17r HM Hordeum vulgare subsp. v... 244 5e-063
gb|BU995877.1|BU995877 HM11K13r HM Hordeum vulgare subsp. v... 244 5e-063
gb|BU998535.1|BU998535 HI11F23r HI Hordeum vulgare subsp. v... 244 5e-063
gb|AF486648.1| Hordeum vulgare subsp. vulgare AGAMOUS-like ... 236 1e-060
gb|AL506480.1|AL506480 AL506480 Hordeum vulgare Barke devel... 230 8e-059
gb|AL506894.1|AL506894 AL506894 Hordeum vulgare Barke devel... 230 8e-059
gb|AL507763.1|AL507763 AL507763 Hordeum vulgare Barke devel... 230 8e-059
gb|AL508019.1|AL508019 AL508019 Hordeum vulgare Barke devel... 230 8e-059
gb|AL509053.1|AL509053 AL509053 Hordeum vulgare Barke devel... 230 8e-059
gb|BE454695.2|BE454695 HVSMEh0095C18f Hordeum vulgare 5-45 ... 230 8e-059
gb|BG367358.1|BG367358 HVSMEi0011P20f Hordeum vulgare 20 DA... 230 8e-059
gb|BE454527.3|BE454527 HVSMEh0094C05f Hordeum vulgare 5-45 ... 230 8e-059
gb|BG414586.2|BG414586 HVSMEk0002P16f Hordeum vulgare testa... 230 8e-059
gb|BQ462735.1|BQ462735 HI01N16T HI Hordeum vulgare subsp. v... 230 8e-059
gb|BQ764786.1|BQ764786 EBca01_SQ004_L21_R carpel, pre-anthe... 230 8e-059
gb|BU969355.1|BU969355 HB11E16r BC Hordeum vulgare subsp. v... 230 8e-059
gb|BU973813.1|BU973813 HB26A20r BC Hordeum vulgare subsp. v... 230 8e-059
gb|BU996265.1|BU996265 HM13B01r HM Hordeum vulgare subsp. v... 230 8e-059
gb|CA024629.1|CA024629 HZ49N15r HZ Hordeum vulgare subsp. v... 230 8e-059
gb|CA025405.1|CA025405 HZ52B05r HZ Hordeum vulgare subsp. v... 230 8e-059
gb|CA025534.1|CA025534 HZ52G24r HZ Hordeum vulgare subsp. v... 230 8e-059
gb|CA025584.1|CA025584 HZ52J05r HZ Hordeum vulgare subsp. v... 230 8e-059
gb|CA028005.1|CA028005 HZ60L09r HZ Hordeum vulgare subsp. v... 230 8e-059
gb|CA028663.1|CA028663 HZ62N08r HZ Hordeum vulgare subsp. v... 230 8e-059
gb|CA029142.1|CA029142 HZ64F07r HZ Hordeum vulgare subsp. v... 228 3e-058
gb|BM442374.2|BM442374 EBan01_SQ003_A06_R anther, yellow st... 222 2e-056
gb|AF486649.1| Hordeum vulgare subsp. vulgare AGAMOUS-like ... 222 2e-056
gb|BG344090.1|BG344090 HVSMEg0007K02f Hordeum vulgare pre-a... 220 8e-056
gb|CK125853.1|CK125853 BES1824111A1d09 BES1824 Hordeum vulg... 212 2e-053
gb|BM097203.2|BM097203 EBpi07_SQ002_L16_R pistil, 12 DPA, n... 210 8e-053
gb|BU975486.1|BU975486 HB31F02r BC Hordeum vulgare subsp. v... 210 8e-053
gb|BI948755.1|BI948755 HVSMEl0010L12f Hordeum vulgare spike... 204 5e-051
gb|BG417142.1|BG417142 HVSMEk0016H10f Hordeum vulgare testa... 202 2e-050
gb|CA026169.1|CA026169 HZ55C06r HZ Hordeum vulgare subsp. v... 200 7e-050
gb|BI948062.1|BI948062 HVSMEl0008A23f Hordeum vulgare spike... 192 2e-047
gb|CA021814.1|CA021814 HZ41D07r HZ Hordeum vulgare subsp. v... 180 7e-044
gb|BU982429.1|BU982429 HA26I11r HA Hordeum vulgare subsp. v... 167 1e-039
gb|AY541067.1| Hordeum vulgare subsp. vulgare AGAMOUS LIKE6... 167 1e-039
gb|BU984647.1|BU984647 HF04I23r HF Hordeum vulgare subsp. v... 161 6e-038
gb|CK124663.1|CK124663 BES1824109o14 BES1824 Hordeum vulgar... 161 6e-038
gb|BE195464.3|BE195464 HVSMEh0089L24f Hordeum vulgare 5-45 ... 159 3e-037
gb|BG415259.2|BG415259 HVSMEk0005M04f Hordeum vulgare testa... 159 3e-037
gb|BG418830.2|BG418830 HVSMEk0024K11f Hordeum vulgare testa... 151 6e-035
gb|BM373901.1|BM373901 EBma03_SQ003_B04_R maternal, 8 DPA, ... 149 2e-034
gb|BE193581.2|BE193581 HVSMEh0081M10f Hordeum vulgare 5-45 ... 145 4e-033
gb|BG414778.2|BG414778 HVSMEk0003L01f Hordeum vulgare testa... 145 4e-033
gb|BG417111.1|BG417111 HVSMEk0016F04f Hordeum vulgare testa... 143 1e-032
gb|BU979781.1|BU979781 HA17E15r HA Hordeum vulgare subsp. v... 135 4e-030
gb|BU981579.1|BU981579 HA24A15r HA Hordeum vulgare subsp. v... 135 4e-030
gb|BE194007.3|BE194007 HVSMEh0083F13f Hordeum vulgare 5-45 ... 131 6e-029
gb|BG414969.2|BG414969 HVSMEk0004I01f Hordeum vulgare testa... 123 1e-026
gb|BE456120.2|BE456120 HVSMEg0019N18f Hordeum vulgare pre-a... 121 5e-026
gb|BQ470743.1|BQ470743 HX03O10r HX Hordeum vulgare subsp. v... 121 5e-026
gb|CA023514.1|CA023514 HZ46H17r HZ Hordeum vulgare subsp. v... 121 5e-026
gb|CA023749.1|CA023749 HZ47E18r HZ Hordeum vulgare subsp. v... 121 5e-026
emb|AJ249145.1|HVU249145 Hordeum vulgare mRNA for MADS-box ... 121 5e-026
gb|BF266152.2|BF266152 HV_CEa0014F03f Hordeum vulgare seedl... 115 3e-024
gb|BU978508.1|BU978508 HA13H01r HA Hordeum vulgare subsp. v... 113 1e-023
gb|BU979387.1|BU979387 HA15P22r HA Hordeum vulgare subsp. v... 113 1e-023
gb|BU997161.1|BU997161 HI07B21r HI Hordeum vulgare subsp. v... 113 1e-023
gb|CA022702.1|CA022702 HZ44B21r HZ Hordeum vulgare subsp. v... 113 1e-023
gb|CA023382.1|CA023382 HZ46B02r HZ Hordeum vulgare subsp. v... 113 1e-023
gb|CA024068.1|CA024068 HZ48E09r HZ Hordeum vulgare subsp. v... 113 1e-023
gb|CA024560.1|CA024560 HZ49K11r HZ Hordeum vulgare subsp. v... 113 1e-023
gb|CA027865.1|CA027865 HZ60E08r HZ Hordeum vulgare subsp. v... 113 1e-023
gb|AL508733.1|AL508733 AL508733 Hordeum vulgare Barke devel... 111 5e-023
gb|BI957577.1|BI957577 HVSMEn0010D09f Hordeum vulgare rachi... 111 5e-023
gb|BG418810.1|BG418810 HVSMEk0024I17f Hordeum vulgare testa... 111 5e-023
gb|AV932969.1|AV932969 AV932969 K. Sato unpublished cDNA li... 111 5e-023
gb|BU981382.1|BU981382 HA23H05r HA Hordeum vulgare subsp. v... 111 5e-023
gb|BU996042.1|BU996042 HM12D17r HM Hordeum vulgare subsp. v... 111 5e-023
gb|BU997970.1|BU997970 HI09J04r HI Hordeum vulgare subsp. v... 111 5e-023
gb|BU999207.1|BU999207 HI13L03r HI Hordeum vulgare subsp. v... 111 5e-023
gb|CA021239.1|CA021239 HZ39I09r HZ Hordeum vulgare subsp. v... 111 5e-023
gb|CA022102.1|CA022102 HZ42C18r HZ Hordeum vulgare subsp. v... 111 5e-023
gb|CA024361.1|CA024361 HZ49B13r HZ Hordeum vulgare subsp. v... 111 5e-023
gb|CA025884.1|CA025884 HZ53G19r HZ Hordeum vulgare subsp. v... 111 5e-023
gb|BJ547238.1|BJ547238 BJ547238 K. Sato unpublished cDNA li... 111 5e-023
gb|BJ547546.1|BJ547546 BJ547546 K. Sato unpublished cDNA li... 111 5e-023
gb|AV922660.2|AV922660 AV922660 K. Sato unpublished cDNA li... 111 5e-023
gb|AY541068.1| Hordeum vulgare subsp. vulgare AGAMOUS LIKE9... 111 5e-023
emb|AJ249143.1|HVU249143 Hordeum vulgare mRNA for MADS-box ... 111 5e-023
emb|AJ249147.1|HVU249147 Hordeum vulgare mRNA for MADS-box ... 111 5e-023
gb|BQ758398.1|BQ758398 EBma05_SQ001_L12_R maternal, 12 DPA,... 105 3e-021
gb|BJ547237.1|BJ547237 BJ547237 K. Sato unpublished cDNA li... 105 3e-021
gb|BE193714.2|BE193714 HVSMEh0082E10f Hordeum vulgare 5-45 ... 103 1e-020
gb|BE195618.2|BE195618 HVSMEh0089O24f Hordeum vulgare 5-45 ... 103 1e-020
gb|BI956235.1|BI956235 HVSMEn0001F21f Hordeum vulgare rachi... 101 5e-020
gb|BF629182.3|BF629182 HVSMEb0010D12f Hordeum vulgare seedl... 101 5e-020
gb|BE194950.3|BE194950 HVSMEh0087M04f Hordeum vulgare 5-45 ... 101 5e-020
gb|BF264447.3|BF264447 HV_CEa0009H05f Hordeum vulgare seedl... 101 5e-020
gb|BQ459169.1|BQ459169 HA02B21r HA Hordeum vulgare subsp. v... 101 5e-020
gb|BM442365.2|BM442365 EBan01_SQ002_P21_R anther, yellow st... 101 5e-020
gb|BM096825.2|BM096825 EBma07_SQ001_M14_R maternal, 21 DPA,... 101 5e-020
gb|BM097091.2|BM097091 EBpi07_SQ002_F23_R pistil, 12 DPA, n... 101 5e-020
gb|BU973061.1|BU973061 HB23K04r BC Hordeum vulgare subsp. v... 101 5e-020
gb|BU975559.1|BU975559 HB31I14r BC Hordeum vulgare subsp. v... 101 5e-020
gb|BU994511.1|BU994511 HM07E21r HM Hordeum vulgare subsp. v... 101 5e-020
gb|CA009054.1|CA009054 HU13A17r HU Hordeum vulgare subsp. v... 101 5e-020
gb|CA009157.1|CA009157 HU13F11r HU Hordeum vulgare subsp. v... 101 5e-020
gb|CA022365.1|CA022365 HZ42O13r HZ Hordeum vulgare subsp. v... 101 5e-020
gb|CK123208.1|CK123208 BES1824102i20 BES1824 Hordeum vulgar... 101 5e-020
emb|AJ249146.1|HVU249146 Hordeum vulgare mRNA for MADS-box ... 101 5e-020
gb|CA026363.1|CA026363 HZ55L07r HZ Hordeum vulgare subsp. v... 100 2e-019
gb|BF627446.2|BF627446 HVSMEb0004O03f Hordeum vulgare seedl... 98 8e-019
gb|BG367455.1|BG367455 HVSMEi0012F04f Hordeum vulgare 20 DA... 98 8e-019
gb|BF624256.3|BF624256 HVSMEa0013C13f Hordeum vulgare seedl... 96 3e-018
gb|BI958544.1|BI958544 HVSMEn0015I07f Hordeum vulgare rachi... 96 3e-018
gb|BE231150.2|BE231150 HVSMEg0017C04f Hordeum vulgare pre-a... 96 3e-018
gb|BG343946.2|BG343946 HVSMEg0007D05f Hordeum vulgare pre-a... 96 3e-018
gb|BM374839.1|BM374839 EBma05_SQ003_C14_R maternal, 12 DPA,... 96 3e-018
gb|AV932867.1|AV932867 AV932867 K. Sato unpublished cDNA li... 96 3e-018
gb|AV933011.1|AV933011 AV933011 K. Sato unpublished cDNA li... 96 3e-018
gb|AV934186.1|AV934186 AV934186 K. Sato unpublished cDNA li... 96 3e-018
gb|BQ462520.1|BQ462520 HI01C12T HI Hordeum vulgare subsp. v... 96 3e-018
gb|BQ463844.1|BQ463844 HG01J20r HG Hordeum vulgare subsp. v... 96 3e-018
gb|BM376225.2|BM376225 EBma01_SQ002_L14_R maternal, 4 DPA, ... 96 3e-018
gb|BU994410.1|BU994410 HM06P17r HM Hordeum vulgare subsp. v... 96 3e-018
gb|BU995060.1|BU995060 HM09B05r HM Hordeum vulgare subsp. v... 96 3e-018
gb|BU997618.1|BU997618 HI08I05r HI Hordeum vulgare subsp. v... 96 3e-018
gb|BU999147.1|BU999147 HI13G17r HI Hordeum vulgare subsp. v... 96 3e-018
gb|BU999601.1|BU999601 HI15A03r HI Hordeum vulgare subsp. v... 96 3e-018
gb|CA021403.1|CA021403 HZ39P24r HZ Hordeum vulgare subsp. v... 96 3e-018
gb|CA023726.1|CA023726 HZ47D14r HZ Hordeum vulgare subsp. v... 96 3e-018
gb|CA024291.1|CA024291 HZ48O08r HZ Hordeum vulgare subsp. v... 96 3e-018
gb|CA025109.1|CA025109 HZ51D19r HZ Hordeum vulgare subsp. v... 96 3e-018
gb|CA025481.1|CA025481 HZ52E16r HZ Hordeum vulgare subsp. v... 96 3e-018
gb|CA032046.1|CA032046 HX11N16r HX Hordeum vulgare subsp. v... 96 3e-018
gb|BJ547239.1|BJ547239 BJ547239 K. Sato unpublished cDNA li... 96 3e-018
gb|BJ547327.1|BJ547327 BJ547327 K. Sato unpublished cDNA li... 96 3e-018
gb|BJ547335.1|BJ547335 BJ547335 K. Sato unpublished cDNA li... 96 3e-018
gb|BJ547364.1|BJ547364 BJ547364 K. Sato unpublished cDNA li... 96 3e-018
gb|BJ547385.1|BJ547385 BJ547385 K. Sato unpublished cDNA li... 96 3e-018
gb|BJ547578.1|BJ547578 BJ547578 K. Sato unpublished cDNA li... 96 3e-018
gb|BJ547620.1|BJ547620 BJ547620 K. Sato unpublished cDNA li... 96 3e-018
gb|BJ547783.1|BJ547783 BJ547783 K. Sato unpublished cDNA li... 96 3e-018
gb|BJ547898.1|BJ547898 BJ547898 K. Sato unpublished cDNA li... 96 3e-018
gb|AY758233.1| Hordeum vulgare subsp. vulgare cultivar More... 96 3e-018
gb|AY758235.1| Hordeum vulgare subsp. vulgare cultivar Igri... 96 3e-018
gb|AY758236.1| Hordeum vulgare subsp. vulgare cultivar Triu... 96 3e-018
gb|AY750995.1| Hordeum vulgare subsp. vulgare cultivar More... 96 3e-018
gb|AY785825.1| Hordeum vulgare subsp. vulgare cultivar More... 96 3e-018
gb|AY785826.1| Hordeum vulgare subsp. vulgare cultivar More... 96 3e-018
gb|AY785827.1| Hordeum vulgare subsp. vulgare cultivar 88Ab... 96 3e-018
gb|AY785828.1| Hordeum vulgare subsp. vulgare cultivar Dick... 96 3e-018
gb|AY785829.1| Hordeum vulgare subsp. vulgare cultivar Harr... 96 3e-018
gb|AY785830.1| Hordeum vulgare subsp. vulgare cultivar Stri... 96 3e-018
gb|AY785831.1| Hordeum vulgare subsp. vulgare cultivar Trem... 96 3e-018
gb|AY785833.1| Hordeum vulgare subsp. vulgare cultivar Igri... 96 3e-018
gb|AY785834.1| Hordeum vulgare subsp. vulgare cultivar Nure... 96 3e-018
gb|AY785835.1| Hordeum vulgare subsp. vulgare cultivar Komp... 96 3e-018
gb|AY866486.1| Hordeum vulgare subsp. vulgare cultivar Triu... 96 3e-018
gb|BF627401.2|BF627401 HVSMEb0004M05f Hordeum vulgare seedl... 94 1e-017
gb|BI957545.1|BI957545 HVSMEn0010B09f Hordeum vulgare rachi... 94 1e-017
gb|BE194699.3|BE194699 HVSMEh0086I20f Hordeum vulgare 5-45 ... 94 1e-017
gb|BE196209.3|BE196209 HVSMEh0091K15f Hordeum vulgare 5-45 ... 94 1e-017
gb|CA027204.1|CA027204 HZ58D04r HZ Hordeum vulgare subsp. v... 94 1e-017
gb|CA031703.1|CA031703 HX10O06r HX Hordeum vulgare subsp. v... 92 5e-017
gb|BG414398.1|BG414398 HVSMEk0002B05f Hordeum vulgare testa... 90 2e-016
gb|BI960528.1|BI960528 HVSMEn0024O19f Hordeum vulgare rachi... 90 2e-016
gb|BG418254.2|BG418254 HVSMEk0022B16f Hordeum vulgare testa... 90 2e-016
gb|BF622888.3|BF622888 HVSMEa0009O05f Hordeum vulgare seedl... 88 8e-016
gb|BG301340.1|BG301340 HVSMEb0020P03f Hordeum vulgare seedl... 88 8e-016
gb|BM442073.2|BM442073 EBan01_SQ002_B20_R anther, yellow st... 88 8e-016
gb|BI776503.2|BI776503 EBpi05_SQ001_K07_R pistil, 8 DPA, no... 88 8e-016
gb|BU996011.1|BU996011 HM12B18r HM Hordeum vulgare subsp. v... 88 8e-016
emb|AJ249144.1|HVU249144 Hordeum vulgare mRNA for MADS-box ... 88 8e-016
gb|BI776993.2|BI776993 EBpi03_SQ001_J15_R pistil, 4 DPA, no... 86 3e-015
gb|CA026975.1|CA026975 HZ57I06r HZ Hordeum vulgare subsp. v... 86 3e-015
gb|CV056304.1|CV056304 BNEL16C1 Barley EST endosperm librar... 86 3e-015
emb|AJ249141.1|HVU249141 Hordeum vulgare mRNA for MADS-box ... 84 1e-014
emb|AJ249142.1|HVU249142 Hordeum vulgare mRNA for MADS-box ... 84 1e-014
gb|BG365393.2|BG365393 HVSMEi0002I08f Hordeum vulgare 20 DA... 82 5e-014
gb|BQ764751.1|BQ764751 EBca01_SQ004_E21_R carpel, pre-anthe... 80 2e-013
gb|BU979626.1|BU979626 HA16M02r HA Hordeum vulgare subsp. v... 80 2e-013
gb|BU979939.1|BU979939 HA17O10r HA Hordeum vulgare subsp. v... 80 2e-013
gb|BU981513.1|BU981513 HA23N18r HA Hordeum vulgare subsp. v... 80 2e-013
gb|BU996044.1|BU996044 HM12D19r HM Hordeum vulgare subsp. v... 74 1e-011
gb|BI958127.1|BI958127 HVSMEn0013H24f Hordeum vulgare rachi... 68 7e-010
gb|BQ469990.1|BQ469990 HX01H06T HX Hordeum vulgare subsp. v... 68 7e-010
gb|BJ543924.1|BJ543924 BJ543924 K. Sato unpublished cDNA li... 62 4e-008
gb|BJ452447.1|BJ452447 BJ452447 K. Sato unpublished cDNA li... 60 2e-007
gb|BU967322.1|BU967322 HB03O23r BC Hordeum vulgare subsp. v... 60 2e-007
gb|BQ758741.1|BQ758741 EBma07_SQ002_M16_R maternal, 21 DPA,... 58 7e-007
gb|BQ758874.1|BQ758874 EBma07_SQ003_G06_R maternal, 21 DPA,... 58 7e-007
gb|BG365779.1|BG365779 HVSMEi0004C18f Hordeum vulgare 20 DA... 56 3e-006
gb|BQ464802.1|BQ464802 HU01I23T HU Hordeum vulgare subsp. v... 56 3e-006
gb|BI948719.1|BI948719 HVSMEl0010J18f Hordeum vulgare spike... 54 1e-005
gb|BQ753907.1|BQ753907 EBca01_SQ002_D17_R carpel, pre-anthe... 46 0.003
gb|CA002368.1|CA002368 HS07E14r HS Hordeum vulgare subsp. v... 46 0.003
gb|CA004880.1|CA004880 HS18P07r HS Hordeum vulgare subsp. v... 46 0.003
gb|CA008106.1|CA008106 HU09O17r HU Hordeum vulgare subsp. v... 46 0.003
gb|BJ547458.1|BJ547458 BJ547458 K. Sato unpublished cDNA li... 46 0.003
gb|CK122890.1|CK122890 BES1824101b13 BES1824 Hordeum vulgar... 46 0.003
gb|AY785815.1| Hordeum vulgare subsp. vulgare cultivar More... 46 0.003
gb|AY785816.1| Hordeum vulgare subsp. vulgare cultivar Harr... 46 0.003
gb|AY785817.1| Hordeum vulgare subsp. vulgare cultivar Dick... 46 0.003
gb|AY785818.1| Hordeum vulgare subsp. vulgare cultivar 88Ab... 46 0.003
gb|AY785819.1| Hordeum vulgare subsp. vulgare cultivar Trem... 46 0.003
gb|AY785821.1| Hordeum vulgare subsp. vulgare cultivar Nure... 46 0.003
gb|AY785822.1| Hordeum vulgare subsp. vulgare cultivar Igri... 46 0.003
gb|AY785823.1| Hordeum vulgare subsp. vulgare cultivar Stri... 46 0.003
gb|AY785824.1| Hordeum vulgare subsp. vulgare cultivar Komp... 46 0.003
gb|AY866485.1| Hordeum vulgare subsp. vulgare cultivar Triu... 46 0.003
gb|BE060404.2|BE060404 HVSMEg0012D12f Hordeum vulgare pre-a... 44 0.010
gb|BI779168.2|BI779168 EBro01_SQ003_D08_R root, 3 week, hyd... 44 0.010
gb|CA030209.1|CA030209 HX06G11r HX Hordeum vulgare subsp. v... 44 0.010
gb|BG310152.1|BG310152 HVSMEc0016P20f Hordeum vulgare seedl... 42 0.041
gb|BE455888.2|BE455888 HVSMEg0017B20f Hordeum vulgare pre-a... 42 0.041
gb|BQ462617.1|BQ462617 HI01H19T HI Hordeum vulgare subsp. v... 42 0.041
gb|BU998520.1|BU998520 HI11F04r HI Hordeum vulgare subsp. v... 42 0.041
gb|CA022292.1|CA022292 HZ42L06r HZ Hordeum vulgare subsp. v... 42 0.041
gb|CA025681.1|CA025681 HZ52N13r HZ Hordeum vulgare subsp. v... 42 0.041
gb|CA032371.1|CA032371 HX12N03r HX Hordeum vulgare subsp. v... 42 0.041
gb|CK125530.1|CK125530 BES1824108p02 BES1824 Hordeum vulgar... 42 0.041
gb|AY541066.1| Hordeum vulgare subsp. vulgare PISTILLATA-li... 42 0.041
gb|BG343071.2|BG343071 HVSMEg0001P05f Hordeum vulgare pre-a... 40 0.16
gb|BQ660301.1|BQ660301 HI01N16w HI Hordeum vulgare subsp. v... 40 0.16
gb|BU971194.1|BU971194 HB16O07r BC Hordeum vulgare subsp. v... 40 0.16
gb|BU971499.1|BU971499 HB17M21r BC Hordeum vulgare subsp. v... 40 0.16
>gb|BU979019.1|BU979019 HA14O21r HA Hordeum vulgare subsp. vulgare cDNA clone HA14O21
5-PRIME, mRNA sequence
Length = 633
Score = 484 bits (244), Expect = e-135
Identities = 472/548 (86%)
Strand = Plus / Plus
Query: 104 atggggaggggaaggattgagatcaagaggatcgagaacaacacgagccggcaggtcacc 163
|||||||||||||||||||||||||||||||| ||||| | ||| ||||| ||||| |||
Sbjct: 71 atggggaggggaaggattgagatcaagaggattgagaataccactagccgccaggtgacc 130
Query: 164 ttctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcgac 223
|||||||||||||| || |||||| | |||||||| ||||||||||||||||| ||||||
Sbjct: 131 ttctgcaagcgccggaacgggctcttgaagaaggcctacgagctctccgtcctgtgcgac 190
Query: 224 gccgaggtggcgctcgtcgtcttctccagccgcggacgcctctacgagtacgccaacaac 283
||||||||||||||| ||||||| ||||||||||| |||||||| |||||| ||||||||
Sbjct: 191 gccgaggtggcgctcatcgtcttttccagccgcggccgcctctatgagtactccaacaac 250
Query: 284 agtgtgaaggctacgatcgagaggtacaagaaggcacacgccgttggctcttcctctggc 343
||||| |||||||| || |||||||||||||||||||| || |||||| |||||||
Sbjct: 251 agtgtcaaggctacaattgagaggtacaagaaggcacatgcttgtggctcaacctctggg 310
Query: 344 cccccactcttagagcacaatgcccagcaattctaccagcaagaatccgcaaaactgcgc 403
| || ||| |||| |||||| ||||||| ||||||||||||| | ||||| |||||
Sbjct: 311 gcacctctcatagaagtcaatgctcagcaatactaccagcaagaaactgcaaagatgcgc 370
Query: 404 aaccagatccagatgctgcaaaacactaacaggcacttggttggtgactctgtgggaaac 463
|||||||||||||||||||||||||||||| ||||||||||||||| ||||| || |||
Sbjct: 371 caccagatccagatgctgcaaaacactaacaagcacttggttggtgattctgttgggaac 430
Query: 464 ttgtcactcaaagagctgaagcagctggagagccgccttgagaaaggcatctctaagatc 523
| |||||||| |||||||||||||| || |||||||| ||||||||||| | ||||||
Sbjct: 431 ctatcactcaaggagctgaagcagctcgaaagccgcctcgagaaaggcattgcaaagatc 490
Query: 524 agggccaggaagagtgagctgctggctgccgagatcaattacatggccaaaagggagact 583
||||||||||||| |||||| || || |||||||| ||||||| |||||||||||
Sbjct: 491 agggccaggaagaatgagctcctatcttgtgagatcaactacatggtcaaaagggagata 550
Query: 584 gagcttcagaatgaccacatgaacctcaggaccaagattgaggagggagagcaacagctg 643
|||||||||| |||| |||| | ||||| |||||||||| |||||| ||||| ||| ||
Sbjct: 551 gagcttcagagtgacaacattgatctcagaaccaagattgcggagggggagcagcagttg 610
Query: 644 cagcaggt 651
||| ||||
Sbjct: 611 cagaaggt 618
>gb|CA021258.1|CA021258 HZ39J06r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ39J06
5-PRIME, mRNA sequence
Length = 607
Score = 470 bits (237), Expect = e-131
Identities = 459/533 (86%)
Strand = Plus / Plus
Query: 104 atggggaggggaaggattgagatcaagaggatcgagaacaacacgagccggcaggtcacc 163
|||||||||||||||||||||||||||||||| ||||| | ||| ||||| ||||| |||
Sbjct: 68 atggggaggggaaggattgagatcaagaggattgagaataccactagccgccaggtgacc 127
Query: 164 ttctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcgac 223
|||||||||||||| || |||||| | |||||||| |||||||||| |||||| ||||||
Sbjct: 128 ttctgcaagcgccggaacgggctcttgaagaaggcctacgagctctacgtcctgtgcgac 187
Query: 224 gccgaggtggcgctcgtcgtcttctccagccgcggacgcctctacgagtacgccaacaac 283
||||||||||||||| ||||||| ||||||||||| |||||||| |||||| ||||||||
Sbjct: 188 gccgaggtggcgctcatcgtcttttccagccgcggccgcctctatgagtactccaacaac 247
Query: 284 agtgtgaaggctacgatcgagaggtacaagaaggcacacgccgttggctcttcctctggc 343
||||| |||||||| || |||||||||||||||||||| || |||||| |||||||
Sbjct: 248 agtgtcaaggctacaattgagaggtacaagaaggcacatgcttgtggctcaacctctggg 307
Query: 344 cccccactcttagagcacaatgcccagcaattctaccagcaagaatccgcaaaactgcgc 403
| || ||| |||| |||||| ||||||| ||||||||||||| | ||||| |||||
Sbjct: 308 gcacctctcatagaagtcaatgctcagcaatactaccagcaagaaactgcaaagatgcgc 367
Query: 404 aaccagatccagatgctgcaaaacactaacaggcacttggttggtgactctgtgggaaac 463
|||||||||||||||||||||||||||||| ||||||||||||||| ||||| || |||
Sbjct: 368 caccagatccagatgctgcaaaacactaacaagcacttggttggtgattctgttgggaac 427
Query: 464 ttgtcactcaaagagctgaagcagctggagagccgccttgagaaaggcatctctaagatc 523
| |||||||| |||||||||||||| || |||||||| ||||||||||| | ||||||
Sbjct: 428 ctatcactcaaggagctgaagcagctcgaaagccgcctcgagaaaggcattgcaaagatc 487
Query: 524 agggccaggaagagtgagctgctggctgccgagatcaattacatggccaaaagggagact 583
||||||||||||| |||||| || || |||||||| ||||||| |||||||||||
Sbjct: 488 agggccaggaagaatgagctcctatcttgtgagatcaactacatggtcaaaagggagata 547
Query: 584 gagcttcagaatgaccacatgaacctcaggaccaagattgaggagggagagca 636
|||||||||| |||| |||| | ||||| |||||||||| |||||| |||||
Sbjct: 548 gagcttcagagtgacaacattgatctcagaaccaagattgcggagggggagca 600
>gb|BQ458971.1|BQ458971 HA02K21r HA Hordeum vulgare subsp. vulgare cDNA clone HA02K21
5-PRIME, mRNA sequence
Length = 606
Score = 460 bits (232), Expect = e-128
Identities = 433/500 (86%)
Strand = Plus / Plus
Query: 104 atggggaggggaaggattgagatcaagaggatcgagaacaacacgagccggcaggtcacc 163
|||||||||||||||||||||||||||||||| ||||| | ||| ||||| ||||| |||
Sbjct: 100 atggggaggggaaggattgagatcaagaggattgagaataccactagccgccaggtgacc 159
Query: 164 ttctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcgac 223
|||||||||||||| || |||||| | |||||||| ||||||||||||||||| ||||||
Sbjct: 160 ttctgcaagcgccggaacgggctcttgaagaaggcctacgagctctccgtcctgtgcgac 219
Query: 224 gccgaggtggcgctcgtcgtcttctccagccgcggacgcctctacgagtacgccaacaac 283
||||||||||||||| ||||||| ||||||||||| |||||||| |||||| ||||||||
Sbjct: 220 gccgaggtggcgctcatcgtcttttccagccgcggccgcctctatgagtactccaacaac 279
Query: 284 agtgtgaaggctacgatcgagaggtacaagaaggcacacgccgttggctcttcctctggc 343
||||| |||||||| || |||||||||||||||||||| || |||||| |||||||
Sbjct: 280 agtgtcaaggctacaattgagaggtacaagaaggcacatgcttgtggctcaacctctggg 339
Query: 344 cccccactcttagagcacaatgcccagcaattctaccagcaagaatccgcaaaactgcgc 403
| || ||| |||| |||||| ||||||| ||||||||||||| | ||||| |||||
Sbjct: 340 gcacctctcatagaagtcaatgctcagcaatactaccagcaagaaactgcaaagatgcgc 399
Query: 404 aaccagatccagatgctgcaaaacactaacaggcacttggttggtgactctgtgggaaac 463
|||||||||||||||||||||||||||||| ||||||||||||||| ||||| || |||
Sbjct: 400 caccagatccagatgctgcaaaacactaacaagcacttggttggtgattctgttgggaac 459
Query: 464 ttgtcactcaaagagctgaagcagctggagagccgccttgagaaaggcatctctaagatc 523
| |||||||| |||||||||||||| || |||||||| ||||||||||| | ||||||
Sbjct: 460 ctatcactcaaggagctgaagcagctcgaaagccgcctcgagaaaggcattgcaaagatc 519
Query: 524 agggccaggaagagtgagctgctggctgccgagatcaattacatggccaaaagggagact 583
||||||||||||| |||||| || || |||||||| ||||||| |||||||||||
Sbjct: 520 agggccaggaagaatgagctcctatcttgtgagatcaactacatggtcaaaagggagata 579
Query: 584 gagcttcagaatgaccacat 603
|||||||||| |||| ||||
Sbjct: 580 gagcttcagagtgacaacat 599
>gb|BU979487.1|BU979487 HA16F04r HA Hordeum vulgare subsp. vulgare cDNA clone HA16F04
5-PRIME, mRNA sequence
Length = 629
Score = 460 bits (232), Expect = e-128
Identities = 433/500 (86%)
Strand = Plus / Plus
Query: 104 atggggaggggaaggattgagatcaagaggatcgagaacaacacgagccggcaggtcacc 163
|||||||||||||||||||||||||||||||| ||||| | ||| ||||| ||||| |||
Sbjct: 123 atggggaggggaaggattgagatcaagaggattgagaataccactagccgccaggtgacc 182
Query: 164 ttctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcgac 223
|||||||||||||| || |||||| | |||||||| ||||||||||||||||| ||||||
Sbjct: 183 ttctgcaagcgccggaacgggctcttgaagaaggcctacgagctctccgtcctgtgcgac 242
Query: 224 gccgaggtggcgctcgtcgtcttctccagccgcggacgcctctacgagtacgccaacaac 283
||||||||||||||| ||||||| ||||||||||| |||||||| |||||| ||||||||
Sbjct: 243 gccgaggtggcgctcatcgtcttttccagccgcggccgcctctatgagtactccaacaac 302
Query: 284 agtgtgaaggctacgatcgagaggtacaagaaggcacacgccgttggctcttcctctggc 343
||||| |||||||| || |||||||||||||||||||| || |||||| |||||||
Sbjct: 303 agtgtcaaggctacaattgagaggtacaagaaggcacatgcttgtggctcaacctctggg 362
Query: 344 cccccactcttagagcacaatgcccagcaattctaccagcaagaatccgcaaaactgcgc 403
| || ||| |||| |||||| ||||||| ||||||||||||| | ||||| |||||
Sbjct: 363 gcacctctcatagaagtcaatgctcagcaatactaccagcaagaaactgcaaagatgcgc 422
Query: 404 aaccagatccagatgctgcaaaacactaacaggcacttggttggtgactctgtgggaaac 463
|||||||||||||||||||||||||||||| ||||||||||||||| ||||| || |||
Sbjct: 423 caccagatccagatgctgcaaaacactaacaagcacttggttggtgattctgttgggaac 482
Query: 464 ttgtcactcaaagagctgaagcagctggagagccgccttgagaaaggcatctctaagatc 523
| |||||||| |||||||||||||| || |||||||| ||||||||||| | ||||||
Sbjct: 483 ctatcactcaaggagctgaagcagctcgaaagccgcctcgagaaaggcattgcaaagatc 542
Query: 524 agggccaggaagagtgagctgctggctgccgagatcaattacatggccaaaagggagact 583
||||||||||||| |||||| || || |||||||| ||||||| |||||||||||
Sbjct: 543 agggccaggaagaatgagctcctatcttgtgagatcaactacatggtcaaaagggagata 602
Query: 584 gagcttcagaatgaccacat 603
|||||||||| |||| ||||
Sbjct: 603 gagcttcagagtgacaacat 622
>gb|CA025113.1|CA025113 HZ51D24r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ51D24
5-PRIME, mRNA sequence
Length = 490
Score = 385 bits (194), Expect = e-105
Identities = 338/386 (87%)
Strand = Plus / Plus
Query: 104 atggggaggggaaggattgagatcaagaggatcgagaacaacacgagccggcaggtcacc 163
|||||||||||||||||||||||||||||||| ||||| | ||| ||||| ||||| |||
Sbjct: 103 atggggaggggaaggattgagatcaagaggattgagaataccactagccgccaggtgacc 162
Query: 164 ttctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcgac 223
|||||||||||||| || |||||| | |||||||| ||||||||||||||||| ||||||
Sbjct: 163 ttctgcaagcgccggaacgggctcttgaagaaggcctacgagctctccgtcctgtgcgac 222
Query: 224 gccgaggtggcgctcgtcgtcttctccagccgcggacgcctctacgagtacgccaacaac 283
||||||||||||||| ||||||| ||||||||||| |||||||| |||||| ||||||||
Sbjct: 223 gccgaggtggcgctcatcgtcttttccagccgcggccgcctctatgagtactccaacaac 282
Query: 284 agtgtgaaggctacgatcgagaggtacaagaaggcacacgccgttggctcttcctctggc 343
||||| |||||||| || |||||||||||||||||||| || |||||| |||||||
Sbjct: 283 agtgtcaaggctacaattgagaggtacaagaaggcacatgcttgtggctcaacctctggg 342
Query: 344 cccccactcttagagcacaatgcccagcaattctaccagcaagaatccgcaaaactgcgc 403
| || ||| |||| |||||| ||||||| ||||||||||||| | ||||| |||||
Sbjct: 343 gcacctctcatagaagtcaatgctcagcaatactaccagcaagaaactgcaaagatgcgc 402
Query: 404 aaccagatccagatgctgcaaaacactaacaggcacttggttggtgactctgtgggaaac 463
|||||||||||||||||||||||||||||| ||||||||||||||| ||||| || |||
Sbjct: 403 caccagatccagatgctgcaaaacactaacaagcacttggttggtgattctgttgggaac 462
Query: 464 ttgtcactcaaagagctgaagcagct 489
| |||||||| ||||||||||||||
Sbjct: 463 ctatcactcaaggagctgaagcagct 488
>gb|AL506475.1|AL506475 AL506475 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY03E09T 5',
mRNA sequence
Length = 673
Score = 244 bits (123), Expect = 5e-063
Identities = 192/215 (89%)
Strand = Plus / Plus
Query: 104 atggggaggggaaggattgagatcaagaggatcgagaacaacacgagccggcaggtcacc 163
||||||||||| |||| ||||||||| | |||||||||| ||| | |||||||||||||
Sbjct: 196 atggggaggggccggatcgagatcaagcgcatcgagaacaccaccaaccggcaggtcacc 255
Query: 164 ttctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcgac 223
||||||||||||||||| || |||||||||||||||||||||||||| || ||||| |||
Sbjct: 256 ttctgcaagcgccgcaacggcctcctcaagaaggcgtacgagctctcggtgctctgtgac 315
Query: 224 gccgaggtggcgctcgtcgtcttctccagccgcggacgcctctacgagtacgccaacaac 283
|||||||| || ||||||||||||||||||||||| ||||||||||||||| | ||||||
Sbjct: 316 gccgaggtcgccctcgtcgtcttctccagccgcggccgcctctacgagtactcaaacaac 375
Query: 284 agtgtgaaggctacgatcgagaggtacaagaaggc 318
|||||||| || || || ||||||||||| |||||
Sbjct: 376 agtgtgaaagccaccattgagaggtacaaaaaggc 410
>gb|BU995356.1|BU995356 HM09P23r HM Hordeum vulgare subsp. vulgare cDNA clone HM09P23
5-PRIME, mRNA sequence
Length = 628
Score = 244 bits (123), Expect = 5e-063
Identities = 192/215 (89%)
Strand = Plus / Plus
Query: 104 atggggaggggaaggattgagatcaagaggatcgagaacaacacgagccggcaggtcacc 163
||||||||||| |||| ||||||||| | |||||||||| ||| | |||||||||||||
Sbjct: 145 atggggaggggccggatcgagatcaagcgcatcgagaacaccaccaaccggcaggtcacc 204
Query: 164 ttctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcgac 223
||||||||||||||||| || |||||||||||||||||||||||||| || ||||| |||
Sbjct: 205 ttctgcaagcgccgcaacggcctcctcaagaaggcgtacgagctctcggtgctctgtgac 264
Query: 224 gccgaggtggcgctcgtcgtcttctccagccgcggacgcctctacgagtacgccaacaac 283
|||||||| || ||||||||||||||||||||||| ||||||||||||||| | ||||||
Sbjct: 265 gccgaggtcgccctcgtcgtcttctccagccgcggccgcctctacgagtactcaaacaac 324
Query: 284 agtgtgaaggctacgatcgagaggtacaagaaggc 318
|||||||| || || || ||||||||||| |||||
Sbjct: 325 agtgtgaaagccaccattgagaggtacaaaaaggc 359
>gb|BU995744.1|BU995744 HM11D17r HM Hordeum vulgare subsp. vulgare cDNA clone HM11D17
5-PRIME, mRNA sequence
Length = 624
Score = 244 bits (123), Expect = 5e-063
Identities = 192/215 (89%)
Strand = Plus / Plus
Query: 104 atggggaggggaaggattgagatcaagaggatcgagaacaacacgagccggcaggtcacc 163
||||||||||| |||| ||||||||| | |||||||||| ||| | |||||||||||||
Sbjct: 209 atggggaggggccggatcgagatcaagcgcatcgagaacaccaccaaccggcaggtcacc 268
Query: 164 ttctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcgac 223
||||||||||||||||| || |||||||||||||||||||||||||| || ||||| |||
Sbjct: 269 ttctgcaagcgccgcaacggcctcctcaagaaggcgtacgagctctcggtgctctgtgac 328
Query: 224 gccgaggtggcgctcgtcgtcttctccagccgcggacgcctctacgagtacgccaacaac 283
|||||||| || ||||||||||||||||||||||| ||||||||||||||| | ||||||
Sbjct: 329 gccgaggtcgccctcgtcgtcttctccagccgcggccgcctctacgagtactcaaacaac 388
Query: 284 agtgtgaaggctacgatcgagaggtacaagaaggc 318
|||||||| || || || ||||||||||| |||||
Sbjct: 389 agtgtgaaagccaccattgagaggtacaaaaaggc 423
>gb|BU995877.1|BU995877 HM11K13r HM Hordeum vulgare subsp. vulgare cDNA clone HM11K13
5-PRIME, mRNA sequence
Length = 568
Score = 244 bits (123), Expect = 5e-063
Identities = 192/215 (89%)
Strand = Plus / Plus
Query: 104 atggggaggggaaggattgagatcaagaggatcgagaacaacacgagccggcaggtcacc 163
||||||||||| |||| ||||||||| | |||||||||| ||| | |||||||||||||
Sbjct: 209 atggggaggggccggatcgagatcaagcgcatcgagaacaccaccaaccggcaggtcacc 268
Query: 164 ttctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcgac 223
||||||||||||||||| || |||||||||||||||||||||||||| || ||||| |||
Sbjct: 269 ttctgcaagcgccgcaacggcctcctcaagaaggcgtacgagctctcggtgctctgtgac 328
Query: 224 gccgaggtggcgctcgtcgtcttctccagccgcggacgcctctacgagtacgccaacaac 283
|||||||| || ||||||||||||||||||||||| ||||||||||||||| | ||||||
Sbjct: 329 gccgaggtcgccctcgtcgtcttctccagccgcggccgcctctacgagtactcaaacaac 388
Query: 284 agtgtgaaggctacgatcgagaggtacaagaaggc 318
|||||||| || || || ||||||||||| |||||
Sbjct: 389 agtgtgaaagccaccattgagaggtacaaaaaggc 423
>gb|BU998535.1|BU998535 HI11F23r HI Hordeum vulgare subsp. vulgare cDNA clone HI11F23
5-PRIME, mRNA sequence
Length = 580
Score = 244 bits (123), Expect = 5e-063
Identities = 192/215 (89%)
Strand = Plus / Plus
Query: 104 atggggaggggaaggattgagatcaagaggatcgagaacaacacgagccggcaggtcacc 163
||||||||||| |||| ||||||||| | |||||||||| ||| | |||||||||||||
Sbjct: 209 atggggaggggccggatcgagatcaagcgcatcgagaacaccaccaaccggcaggtcacc 268
Query: 164 ttctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcgac 223
||||||||||||||||| || |||||||||||||||||||||||||| || ||||| |||
Sbjct: 269 ttctgcaagcgccgcaacggcctcctcaagaaggcgtacgagctctcggtgctctgtgac 328
Query: 224 gccgaggtggcgctcgtcgtcttctccagccgcggacgcctctacgagtacgccaacaac 283
|||||||| || ||||||||||||||||||||||| ||||||||||||||| | ||||||
Sbjct: 329 gccgaggtcgccctcgtcgtcttctccagccgcggccgcctctacgagtactcaaacaac 388
Query: 284 agtgtgaaggctacgatcgagaggtacaagaaggc 318
|||||||| || || || ||||||||||| |||||
Sbjct: 389 agtgtgaaagccaccattgagaggtacaaaaaggc 423
>gb|AF486648.1| Hordeum vulgare subsp. vulgare AGAMOUS-like protein 1 HvAG1 (AG1)
mRNA, complete cds
Length = 1163
Score = 236 bits (119), Expect = 1e-060
Identities = 191/215 (88%)
Strand = Plus / Plus
Query: 104 atggggaggggaaggattgagatcaagaggatcgagaacaacacgagccggcaggtcacc 163
||||||||||| |||| ||||||||| | |||||||||| ||| | |||||||||||||
Sbjct: 139 atggggaggggccggatcgagatcaagcgcatcgagaacaccaccaaccggcaggtcacc 198
Query: 164 ttctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcgac 223
||||||||||||||||| || |||||||||||||||||||||||||| || ||||| |||
Sbjct: 199 ttctgcaagcgccgcaacggcctcctcaagaaggcgtacgagctctcggtgctctgtgac 258
Query: 224 gccgaggtggcgctcgtcgtcttctccagccgcggacgcctctacgagtacgccaacaac 283
|||||||| || ||||||||||||||||||||||| ||||||||||| ||| | ||||||
Sbjct: 259 gccgaggtcgccctcgtcgtcttctccagccgcgggcgcctctacgaatactcaaacaac 318
Query: 284 agtgtgaaggctacgatcgagaggtacaagaaggc 318
|||||||| || || || ||||||||||| |||||
Sbjct: 319 agtgtgaaagccaccattgagaggtacaaaaaggc 353
>gb|AL506480.1|AL506480 AL506480 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY03E14T 5',
mRNA sequence
Length = 700
Score = 230 bits (116), Expect = 8e-059
Identities = 191/216 (88%)
Strand = Plus / Plus
Query: 104 atggggaggggaaggattgagatcaagaggatcgagaacaacacgagccggcaggtcacc 163
|||||||| || ||||| ||||||||| | |||||||||| |||| |||||||||||||
Sbjct: 109 atggggagagggaggatcgagatcaagcgcatcgagaacacgacgaaccggcaggtcacc 168
Query: 164 ttctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcgac 223
||||||||||||||||| || ||||| |||||||||||||||||||| || |||||||||
Sbjct: 169 ttctgcaagcgccgcaacggactcctgaagaaggcgtacgagctctcggtgctctgcgac 228
Query: 224 gccgaggtggcgctcgtcgtcttctccagccgcggacgcctctacgagtacgccaacaac 283
|| ||||| |||||||||||||| ||||||||||| |||||||| |||||| ||||||||
Sbjct: 229 gctgaggtcgcgctcgtcgtcttttccagccgcgggcgcctctatgagtactccaacaac 288
Query: 284 agtgtgaaggctacgatcgagaggtacaagaaggca 319
|| || ||||| || || ||||| ||||||||||||
Sbjct: 289 agcgtcaaggcaaccattgagagatacaagaaggca 324
>gb|AL506894.1|AL506894 AL506894 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY04I23T 5',
mRNA sequence
Length = 700
Score = 230 bits (116), Expect = 8e-059
Identities = 191/216 (88%)
Strand = Plus / Plus
Query: 104 atggggaggggaaggattgagatcaagaggatcgagaacaacacgagccggcaggtcacc 163
|||||||| || ||||| ||||||||| | |||||||||| |||| |||||||||||||
Sbjct: 188 atggggagagggaggatcgagatcaagcgcatcgagaacacgacgaaccggcaggtcacc 247
Query: 164 ttctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcgac 223
||||||||||||||||| || ||||| |||||||||||||||||||| || |||||||||
Sbjct: 248 ttctgcaagcgccgcaacggactcctgaagaaggcgtacgagctctcggtgctctgcgac 307
Query: 224 gccgaggtggcgctcgtcgtcttctccagccgcggacgcctctacgagtacgccaacaac 283
|| ||||| |||||||||||||| ||||||||||| |||||||| |||||| ||||||||
Sbjct: 308 gctgaggtcgcgctcgtcgtcttttccagccgcgggcgcctctatgagtactccaacaac 367
Query: 284 agtgtgaaggctacgatcgagaggtacaagaaggca 319
|| || ||||| || || ||||| ||||||||||||
Sbjct: 368 agcgtcaaggcaaccattgagagatacaagaaggca 403
>gb|AL507763.1|AL507763 AL507763 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY06M13V 5',
mRNA sequence
Length = 700
Score = 230 bits (116), Expect = 8e-059
Identities = 191/216 (88%)
Strand = Plus / Plus
Query: 104 atggggaggggaaggattgagatcaagaggatcgagaacaacacgagccggcaggtcacc 163
|||||||| || ||||| ||||||||| | |||||||||| |||| |||||||||||||
Sbjct: 208 atggggagagggaggatcgagatcaagcgcatcgagaacacgacgaaccggcaggtcacc 267
Query: 164 ttctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcgac 223
||||||||||||||||| || ||||| |||||||||||||||||||| || |||||||||
Sbjct: 268 ttctgcaagcgccgcaacggactcctgaagaaggcgtacgagctctcggtgctctgcgac 327
Query: 224 gccgaggtggcgctcgtcgtcttctccagccgcggacgcctctacgagtacgccaacaac 283
|| ||||| |||||||||||||| ||||||||||| |||||||| |||||| ||||||||
Sbjct: 328 gctgaggtcgcgctcgtcgtcttttccagccgcgggcgcctctatgagtactccaacaac 387
Query: 284 agtgtgaaggctacgatcgagaggtacaagaaggca 319
|| || ||||| || || ||||| ||||||||||||
Sbjct: 388 agcgtcaaggcaaccattgagagatacaagaaggca 423
>gb|AL508019.1|AL508019 AL508019 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY07I15V 5',
mRNA sequence
Length = 700
Score = 230 bits (116), Expect = 8e-059
Identities = 191/216 (88%)
Strand = Plus / Plus
Query: 104 atggggaggggaaggattgagatcaagaggatcgagaacaacacgagccggcaggtcacc 163
|||||||| || ||||| ||||||||| | |||||||||| |||| |||||||||||||
Sbjct: 136 atggggagagggaggatcgagatcaagcgcatcgagaacacgacgaaccggcaggtcacc 195
Query: 164 ttctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcgac 223
||||||||||||||||| || ||||| |||||||||||||||||||| || |||||||||
Sbjct: 196 ttctgcaagcgccgcaacggactcctgaagaaggcgtacgagctctcggtgctctgcgac 255
Query: 224 gccgaggtggcgctcgtcgtcttctccagccgcggacgcctctacgagtacgccaacaac 283
|| ||||| |||||||||||||| ||||||||||| |||||||| |||||| ||||||||
Sbjct: 256 gctgaggtcgcgctcgtcgtcttttccagccgcgggcgcctctatgagtactccaacaac 315
Query: 284 agtgtgaaggctacgatcgagaggtacaagaaggca 319
|| || ||||| || || ||||| ||||||||||||
Sbjct: 316 agcgtcaaggcaaccattgagagatacaagaaggca 351
>gb|AL509053.1|AL509053 AL509053 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY10J07V 5',
mRNA sequence
Length = 700
Score = 230 bits (116), Expect = 8e-059
Identities = 191/216 (88%)
Strand = Plus / Plus
Query: 104 atggggaggggaaggattgagatcaagaggatcgagaacaacacgagccggcaggtcacc 163
|||||||| || ||||| ||||||||| | |||||||||| |||| |||||||||||||
Sbjct: 137 atggggagagggaggatcgagatcaagcgcatcgagaacacgacgaaccggcaggtcacc 196
Query: 164 ttctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcgac 223
||||||||||||||||| || ||||| |||||||||||||||||||| || |||||||||
Sbjct: 197 ttctgcaagcgccgcaacggactcctgaagaaggcgtacgagctctcggtgctctgcgac 256
Query: 224 gccgaggtggcgctcgtcgtcttctccagccgcggacgcctctacgagtacgccaacaac 283
|| ||||| |||||||||||||| ||||||||||| |||||||| |||||| ||||||||
Sbjct: 257 gctgaggtcgcgctcgtcgtcttttccagccgcgggcgcctctatgagtactccaacaac 316
Query: 284 agtgtgaaggctacgatcgagaggtacaagaaggca 319
|| || ||||| || || ||||| ||||||||||||
Sbjct: 317 agcgtcaaggcaaccattgagagatacaagaaggca 352
>gb|BE454695.2|BE454695 HVSMEh0095C18f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0095C18f, mRNA sequence
Length = 880
Score = 230 bits (116), Expect = 8e-059
Identities = 191/216 (88%)
Strand = Plus / Plus
Query: 104 atggggaggggaaggattgagatcaagaggatcgagaacaacacgagccggcaggtcacc 163
|||||||| || ||||| ||||||||| | |||||||||| |||| |||||||||||||
Sbjct: 132 atggggagagggaggatcgagatcaagcgcatcgagaacacgacgaaccggcaggtcacc 191
Query: 164 ttctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcgac 223
||||||||||||||||| || ||||| |||||||||||||||||||| || |||||||||
Sbjct: 192 ttctgcaagcgccgcaacggactcctgaagaaggcgtacgagctctcggtgctctgcgac 251
Query: 224 gccgaggtggcgctcgtcgtcttctccagccgcggacgcctctacgagtacgccaacaac 283
|| ||||| |||||||||||||| ||||||||||| |||||||| |||||| ||||||||
Sbjct: 252 gctgaggtcgcgctcgtcgtcttttccagccgcgggcgcctctatgagtactccaacaac 311
Query: 284 agtgtgaaggctacgatcgagaggtacaagaaggca 319
|| || ||||| || || ||||| ||||||||||||
Sbjct: 312 agcgtcaaggcaaccattgagagatacaagaaggca 347
>gb|BG367358.1|BG367358 HVSMEi0011P20f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0011P20f, mRNA sequence
Length = 512
Score = 230 bits (116), Expect = 8e-059
Identities = 191/216 (88%)
Strand = Plus / Plus
Query: 104 atggggaggggaaggattgagatcaagaggatcgagaacaacacgagccggcaggtcacc 163
|||||||| || ||||| ||||||||| | |||||||||| |||| |||||||||||||
Sbjct: 23 atggggagagggaggatcgagatcaagcgcatcgagaacacgacgaaccggcaggtcacc 82
Query: 164 ttctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcgac 223
||||||||||||||||| || ||||| |||||||||||||||||||| || |||||||||
Sbjct: 83 ttctgcaagcgccgcaacggactcctgaagaaggcgtacgagctctcggtgctctgcgac 142
Query: 224 gccgaggtggcgctcgtcgtcttctccagccgcggacgcctctacgagtacgccaacaac 283
|| ||||| |||||||||||||| ||||||||||| |||||||| |||||| ||||||||
Sbjct: 143 gctgaggtcgcgctcgtcgtcttttccagccgcgggcgcctctatgagtactccaacaac 202
Query: 284 agtgtgaaggctacgatcgagaggtacaagaaggca 319
|| || ||||| || || ||||| ||||||||||||
Sbjct: 203 agcgtcaaggcaaccattgagagatacaagaaggca 238
>gb|BE454527.3|BE454527 HVSMEh0094C05f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0094C05f, mRNA sequence
Length = 916
Score = 230 bits (116), Expect = 8e-059
Identities = 191/216 (88%)
Strand = Plus / Plus
Query: 104 atggggaggggaaggattgagatcaagaggatcgagaacaacacgagccggcaggtcacc 163
|||||||| || ||||| ||||||||| | |||||||||| |||| |||||||||||||
Sbjct: 91 atggggagagggaggatcgagatcaagcgcatcgagaacacgacgaaccggcaggtcacc 150
Query: 164 ttctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcgac 223
||||||||||||||||| || ||||| |||||||||||||||||||| || |||||||||
Sbjct: 151 ttctgcaagcgccgcaacggactcctgaagaaggcgtacgagctctcggtgctctgcgac 210
Query: 224 gccgaggtggcgctcgtcgtcttctccagccgcggacgcctctacgagtacgccaacaac 283
|| ||||| |||||||||||||| ||||||||||| |||||||| |||||| ||||||||
Sbjct: 211 gctgaggtcgcgctcgtcgtcttttccagccgcgggcgcctctatgagtactccaacaac 270
Query: 284 agtgtgaaggctacgatcgagaggtacaagaaggca 319
|| || ||||| || || ||||| ||||||||||||
Sbjct: 271 agcgtcaaggcaaccattgagagatacaagaaggca 306
>gb|BG414586.2|BG414586 HVSMEk0002P16f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0002P16f, mRNA sequence
Length = 804
Score = 230 bits (116), Expect = 8e-059
Identities = 191/216 (88%)
Strand = Plus / Plus
Query: 104 atggggaggggaaggattgagatcaagaggatcgagaacaacacgagccggcaggtcacc 163
|||||||| || ||||| ||||||||| | |||||||||| |||| |||||||||||||
Sbjct: 132 atggggagagggaggatcgagatcaagcgcatcgagaacacgacgaaccggcaggtcacc 191
Query: 164 ttctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcgac 223
||||||||||||||||| || ||||| |||||||||||||||||||| || |||||||||
Sbjct: 192 ttctgcaagcgccgcaacggactcctgaagaaggcgtacgagctctcggtgctctgcgac 251
Query: 224 gccgaggtggcgctcgtcgtcttctccagccgcggacgcctctacgagtacgccaacaac 283
|| ||||| |||||||||||||| ||||||||||| |||||||| |||||| ||||||||
Sbjct: 252 gctgaggtcgcgctcgtcgtcttttccagccgcgggcgcctctatgagtactccaacaac 311
Query: 284 agtgtgaaggctacgatcgagaggtacaagaaggca 319
|| || ||||| || || ||||| ||||||||||||
Sbjct: 312 agcgtcaaggcaaccattgagagatacaagaaggca 347
>gb|BQ462735.1|BQ462735 HI01N16T HI Hordeum vulgare subsp. vulgare cDNA clone HI01N16
5-PRIME, mRNA sequence
Length = 547
Score = 230 bits (116), Expect = 8e-059
Identities = 191/216 (88%)
Strand = Plus / Plus
Query: 104 atggggaggggaaggattgagatcaagaggatcgagaacaacacgagccggcaggtcacc 163
|||||||| || ||||| ||||||||| | |||||||||| |||| |||||||||||||
Sbjct: 145 atggggagagggaggatcgagatcaagcgcatcgagaacacgacgaaccggcaggtcacc 204
Query: 164 ttctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcgac 223
||||||||||||||||| || ||||| |||||||||||||||||||| || |||||||||
Sbjct: 205 ttctgcaagcgccgcaacggactcctgaagaaggcgtacgagctctcggtgctctgcgac 264
Query: 224 gccgaggtggcgctcgtcgtcttctccagccgcggacgcctctacgagtacgccaacaac 283
|| ||||| |||||||||||||| ||||||||||| |||||||| |||||| ||||||||
Sbjct: 265 gctgaggtcgcgctcgtcgtcttttccagccgcgggcgcctctatgagtactccaacaac 324
Query: 284 agtgtgaaggctacgatcgagaggtacaagaaggca 319
|| || ||||| || || ||||| ||||||||||||
Sbjct: 325 agcgtcaaggcaaccattgagagatacaagaaggca 360
>gb|BQ764786.1|BQ764786 EBca01_SQ004_L21_R carpel, pre-anthesis, no treatment, cv Optic,
EBca01 Hordeum vulgare subsp. vulgare cDNA clone
EBca01_SQ004_L21 5', mRNA sequence
Length = 719
Score = 230 bits (116), Expect = 8e-059
Identities = 191/216 (88%)
Strand = Plus / Plus
Query: 104 atggggaggggaaggattgagatcaagaggatcgagaacaacacgagccggcaggtcacc 163
|||||||| || ||||| ||||||||| | |||||||||| |||| |||||||||||||
Sbjct: 114 atggggagagggaggatcgagatcaagcgcatcgagaacacgacgaaccggcaggtcacc 173
Query: 164 ttctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcgac 223
||||||||||||||||| || ||||| |||||||||||||||||||| || |||||||||
Sbjct: 174 ttctgcaagcgccgcaacggactcctgaagaaggcgtacgagctctcggtgctctgcgac 233
Query: 224 gccgaggtggcgctcgtcgtcttctccagccgcggacgcctctacgagtacgccaacaac 283
|| ||||| |||||||||||||| ||||||||||| |||||||| |||||| ||||||||
Sbjct: 234 gctgaggtcgcgctcgtcgtcttttccagccgcgggcgcctctatgagtactccaacaac 293
Query: 284 agtgtgaaggctacgatcgagaggtacaagaaggca 319
|| || ||||| || || ||||| ||||||||||||
Sbjct: 294 agcgtcaaggcaaccattgagagatacaagaaggca 329
>gb|BU969355.1|BU969355 HB11E16r BC Hordeum vulgare subsp. vulgare cDNA clone HB11E16
5-PRIME, mRNA sequence
Length = 463
Score = 230 bits (116), Expect = 8e-059
Identities = 191/216 (88%)
Strand = Plus / Plus
Query: 104 atggggaggggaaggattgagatcaagaggatcgagaacaacacgagccggcaggtcacc 163
|||||||| || ||||| ||||||||| | |||||||||| |||| |||||||||||||
Sbjct: 151 atggggagagggaggatcgagatcaagcgcatcgagaacacgacgaaccggcaggtcacc 210
Query: 164 ttctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcgac 223
||||||||||||||||| || ||||| |||||||||||||||||||| || |||||||||
Sbjct: 211 ttctgcaagcgccgcaacggactcctgaagaaggcgtacgagctctcggtgctctgcgac 270
Query: 224 gccgaggtggcgctcgtcgtcttctccagccgcggacgcctctacgagtacgccaacaac 283
|| ||||| |||||||||||||| ||||||||||| |||||||| |||||| ||||||||
Sbjct: 271 gctgaggtcgcgctcgtcgtcttttccagccgcgggcgcctctatgagtactccaacaac 330
Query: 284 agtgtgaaggctacgatcgagaggtacaagaaggca 319
|| || ||||| || || ||||| ||||||||||||
Sbjct: 331 agcgtcaaggcaaccattgagagatacaagaaggca 366
>gb|BU973813.1|BU973813 HB26A20r BC Hordeum vulgare subsp. vulgare cDNA clone HB26A20
5-PRIME, mRNA sequence
Length = 554
Score = 230 bits (116), Expect = 8e-059
Identities = 191/216 (88%)
Strand = Plus / Plus
Query: 104 atggggaggggaaggattgagatcaagaggatcgagaacaacacgagccggcaggtcacc 163
|||||||| || ||||| ||||||||| | |||||||||| |||| |||||||||||||
Sbjct: 125 atggggagagggaggatcgagatcaagcgcatcgagaacacgacgaaccggcaggtcacc 184
Query: 164 ttctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcgac 223
||||||||||||||||| || ||||| |||||||||||||||||||| || |||||||||
Sbjct: 185 ttctgcaagcgccgcaacggactcctgaagaaggcgtacgagctctcggtgctctgcgac 244
Query: 224 gccgaggtggcgctcgtcgtcttctccagccgcggacgcctctacgagtacgccaacaac 283
|| ||||| |||||||||||||| ||||||||||| |||||||| |||||| ||||||||
Sbjct: 245 gctgaggtcgcgctcgtcgtcttttccagccgcgggcgcctctatgagtactccaacaac 304
Query: 284 agtgtgaaggctacgatcgagaggtacaagaaggca 319
|| || ||||| || || ||||| ||||||||||||
Sbjct: 305 agcgtcaaggcaaccattgagagatacaagaaggca 340
>gb|BU996265.1|BU996265 HM13B01r HM Hordeum vulgare subsp. vulgare cDNA clone HM13B01
5-PRIME, mRNA sequence
Length = 637
Score = 230 bits (116), Expect = 8e-059
Identities = 191/216 (88%)
Strand = Plus / Plus
Query: 104 atggggaggggaaggattgagatcaagaggatcgagaacaacacgagccggcaggtcacc 163
|||||||| || ||||| ||||||||| | |||||||||| |||| |||||||||||||
Sbjct: 140 atggggagagggaggatcgagatcaagcgcatcgagaacacgacgaaccggcaggtcacc 199
Query: 164 ttctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcgac 223
||||||||||||||||| || ||||| |||||||||||||||||||| || |||||||||
Sbjct: 200 ttctgcaagcgccgcaacggactcctgaagaaggcgtacgagctctcggtgctctgcgac 259
Query: 224 gccgaggtggcgctcgtcgtcttctccagccgcggacgcctctacgagtacgccaacaac 283
|| ||||| |||||||||||||| ||||||||||| |||||||| |||||| ||||||||
Sbjct: 260 gctgaggtcgcgctcgtcgtcttttccagccgcgggcgcctctatgagtactccaacaac 319
Query: 284 agtgtgaaggctacgatcgagaggtacaagaaggca 319
|| || ||||| || || ||||| ||||||||||||
Sbjct: 320 agcgtcaaggcaaccattgagagatacaagaaggca 355
>gb|CA024629.1|CA024629 HZ49N15r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ49N15
5-PRIME, mRNA sequence
Length = 633
Score = 230 bits (116), Expect = 8e-059
Identities = 191/216 (88%)
Strand = Plus / Plus
Query: 104 atggggaggggaaggattgagatcaagaggatcgagaacaacacgagccggcaggtcacc 163
|||||||| || ||||| ||||||||| | |||||||||| |||| |||||||||||||
Sbjct: 154 atggggagagggaggatcgagatcaagcgcatcgagaacacgacgaaccggcaggtcacc 213
Query: 164 ttctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcgac 223
||||||||||||||||| || ||||| |||||||||||||||||||| || |||||||||
Sbjct: 214 ttctgcaagcgccgcaacggactcctgaagaaggcgtacgagctctcggtgctctgcgac 273
Query: 224 gccgaggtggcgctcgtcgtcttctccagccgcggacgcctctacgagtacgccaacaac 283
|| ||||| |||||||||||||| ||||||||||| |||||||| |||||| ||||||||
Sbjct: 274 gctgaggtcgcgctcgtcgtcttttccagccgcgggcgcctctatgagtactccaacaac 333
Query: 284 agtgtgaaggctacgatcgagaggtacaagaaggca 319
|| || ||||| || || ||||| ||||||||||||
Sbjct: 334 agcgtcaaggcaaccattgagagatacaagaaggca 369
>gb|CA025405.1|CA025405 HZ52B05r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ52B05
5-PRIME, mRNA sequence
Length = 553
Score = 230 bits (116), Expect = 8e-059
Identities = 191/216 (88%)
Strand = Plus / Plus
Query: 104 atggggaggggaaggattgagatcaagaggatcgagaacaacacgagccggcaggtcacc 163
|||||||| || ||||| ||||||||| | |||||||||| |||| |||||||||||||
Sbjct: 104 atggggagagggaggatcgagatcaagcgcatcgagaacacgacgaaccggcaggtcacc 163
Query: 164 ttctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcgac 223
||||||||||||||||| || ||||| |||||||||||||||||||| || |||||||||
Sbjct: 164 ttctgcaagcgccgcaacggactcctgaagaaggcgtacgagctctcggtgctctgcgac 223
Query: 224 gccgaggtggcgctcgtcgtcttctccagccgcggacgcctctacgagtacgccaacaac 283
|| ||||| |||||||||||||| ||||||||||| |||||||| |||||| ||||||||
Sbjct: 224 gctgaggtcgcgctcgtcgtcttttccagccgcgggcgcctctatgagtactccaacaac 283
Query: 284 agtgtgaaggctacgatcgagaggtacaagaaggca 319
|| || ||||| || || ||||| ||||||||||||
Sbjct: 284 agcgtcaaggcaaccattgagagatacaagaaggca 319
>gb|CA025534.1|CA025534 HZ52G24r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ52G24
5-PRIME, mRNA sequence
Length = 542
Score = 230 bits (116), Expect = 8e-059
Identities = 191/216 (88%)
Strand = Plus / Plus
Query: 104 atggggaggggaaggattgagatcaagaggatcgagaacaacacgagccggcaggtcacc 163
|||||||| || ||||| ||||||||| | |||||||||| |||| |||||||||||||
Sbjct: 92 atggggagagggaggatcgagatcaagcgcatcgagaacacgacgaaccggcaggtcacc 151
Query: 164 ttctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcgac 223
||||||||||||||||| || ||||| |||||||||||||||||||| || |||||||||
Sbjct: 152 ttctgcaagcgccgcaacggactcctgaagaaggcgtacgagctctcggtgctctgcgac 211
Query: 224 gccgaggtggcgctcgtcgtcttctccagccgcggacgcctctacgagtacgccaacaac 283
|| ||||| |||||||||||||| ||||||||||| |||||||| |||||| ||||||||
Sbjct: 212 gctgaggtcgcgctcgtcgtcttttccagccgcgggcgcctctatgagtactccaacaac 271
Query: 284 agtgtgaaggctacgatcgagaggtacaagaaggca 319
|| || ||||| || || ||||| ||||||||||||
Sbjct: 272 agcgtcaaggcaaccattgagagatacaagaaggca 307
>gb|CA025584.1|CA025584 HZ52J05r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ52J05
5-PRIME, mRNA sequence
Length = 574
Score = 230 bits (116), Expect = 8e-059
Identities = 191/216 (88%)
Strand = Plus / Plus
Query: 104 atggggaggggaaggattgagatcaagaggatcgagaacaacacgagccggcaggtcacc 163
|||||||| || ||||| ||||||||| | |||||||||| |||| |||||||||||||
Sbjct: 124 atggggagagggaggatcgagatcaagcgcatcgagaacacgacgaaccggcaggtcacc 183
Query: 164 ttctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcgac 223
||||||||||||||||| || ||||| |||||||||||||||||||| || |||||||||
Sbjct: 184 ttctgcaagcgccgcaacggactcctgaagaaggcgtacgagctctcggtgctctgcgac 243
Query: 224 gccgaggtggcgctcgtcgtcttctccagccgcggacgcctctacgagtacgccaacaac 283
|| ||||| |||||||||||||| ||||||||||| |||||||| |||||| ||||||||
Sbjct: 244 gctgaggtcgcgctcgtcgtcttttccagccgcgggcgcctctatgagtactccaacaac 303
Query: 284 agtgtgaaggctacgatcgagaggtacaagaaggca 319
|| || ||||| || || ||||| ||||||||||||
Sbjct: 304 agcgtcaaggcaaccattgagagatacaagaaggca 339
>gb|CA028005.1|CA028005 HZ60L09r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ60L09
5-PRIME, mRNA sequence
Length = 479
Score = 230 bits (116), Expect = 8e-059
Identities = 191/216 (88%)
Strand = Plus / Plus
Query: 104 atggggaggggaaggattgagatcaagaggatcgagaacaacacgagccggcaggtcacc 163
|||||||| || ||||| ||||||||| | |||||||||| |||| |||||||||||||
Sbjct: 133 atggggagagggaggatcgagatcaagcgcatcgagaacacgacgaaccggcaggtcacc 192
Query: 164 ttctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcgac 223
||||||||||||||||| || ||||| |||||||||||||||||||| || |||||||||
Sbjct: 193 ttctgcaagcgccgcaacggactcctgaagaaggcgtacgagctctcggtgctctgcgac 252
Query: 224 gccgaggtggcgctcgtcgtcttctccagccgcggacgcctctacgagtacgccaacaac 283
|| ||||| |||||||||||||| ||||||||||| |||||||| |||||| ||||||||
Sbjct: 253 gctgaggtcgcgctcgtcgtcttttccagccgcgggcgcctctatgagtactccaacaac 312
Query: 284 agtgtgaaggctacgatcgagaggtacaagaaggca 319
|| || ||||| || || ||||| ||||||||||||
Sbjct: 313 agcgtcaaggcaaccattgagagatacaagaaggca 348
>gb|CA028663.1|CA028663 HZ62N08r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ62N08
5-PRIME, mRNA sequence
Length = 546
Score = 230 bits (116), Expect = 8e-059
Identities = 191/216 (88%)
Strand = Plus / Plus
Query: 104 atggggaggggaaggattgagatcaagaggatcgagaacaacacgagccggcaggtcacc 163
|||||||| || ||||| ||||||||| | |||||||||| |||| |||||||||||||
Sbjct: 145 atggggagagggaggatcgagatcaagcgcatcgagaacacgacgaaccggcaggtcacc 204
Query: 164 ttctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcgac 223
||||||||||||||||| || ||||| |||||||||||||||||||| || |||||||||
Sbjct: 205 ttctgcaagcgccgcaacggactcctgaagaaggcgtacgagctctcggtgctctgcgac 264
Query: 224 gccgaggtggcgctcgtcgtcttctccagccgcggacgcctctacgagtacgccaacaac 283
|| ||||| |||||||||||||| ||||||||||| |||||||| |||||| ||||||||
Sbjct: 265 gctgaggtcgcgctcgtcgtcttttccagccgcgggcgcctctatgagtactccaacaac 324
Query: 284 agtgtgaaggctacgatcgagaggtacaagaaggca 319
|| || ||||| || || ||||| ||||||||||||
Sbjct: 325 agcgtcaaggcaaccattgagagatacaagaaggca 360
>gb|CA029142.1|CA029142 HZ64F07r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ64F07
5-PRIME, mRNA sequence
Length = 336
Score = 228 bits (115), Expect = 3e-058
Identities = 190/215 (88%)
Strand = Plus / Plus
Query: 104 atggggaggggaaggattgagatcaagaggatcgagaacaacacgagccggcaggtcacc 163
|||||||| || ||||| ||||||||| | |||||||||| |||| |||||||||||||
Sbjct: 122 atggggagagggaggatcgagatcaagcgcatcgagaacacgacgaaccggcaggtcacc 181
Query: 164 ttctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcgac 223
||||||||||||||||| || ||||| |||||||||||||||||||| || |||||||||
Sbjct: 182 ttctgcaagcgccgcaacggactcctgaagaaggcgtacgagctctcggtgctctgcgac 241
Query: 224 gccgaggtggcgctcgtcgtcttctccagccgcggacgcctctacgagtacgccaacaac 283
|| ||||| |||||||||||||| ||||||||||| |||||||| |||||| ||||||||
Sbjct: 242 gctgaggtcgcgctcgtcgtcttttccagccgcgggcgcctctatgagtactccaacaac 301
Query: 284 agtgtgaaggctacgatcgagaggtacaagaaggc 318
|| || ||||| || || ||||| |||||||||||
Sbjct: 302 agcgtcaaggcaaccattgagagatacaagaaggc 336
>gb|BM442374.2|BM442374 EBan01_SQ003_A06_R anther, yellow stage, no treatment, cv Optic,
EBan01 Hordeum vulgare subsp. vulgare cDNA clone
EBan01_SQ003_A06 5', mRNA sequence
Length = 372
Score = 222 bits (112), Expect = 2e-056
Identities = 190/216 (87%)
Strand = Plus / Plus
Query: 104 atggggaggggaaggattgagatcaagaggatcgagaacaacacgagccggcaggtcacc 163
|||||||| || ||||| ||||||||| | |||||||||| |||| |||||||||||||
Sbjct: 113 atggggagagggaggatcgagatcaagcgcatcgagaacacgacgaaccggcaggtcacc 172
Query: 164 ttctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcgac 223
||||||||||||||||| || ||||| ||||| |||||||||||||| || |||||||||
Sbjct: 173 ttctgcaagcgccgcaacggactcctgaagaaagcgtacgagctctcggtgctctgcgac 232
Query: 224 gccgaggtggcgctcgtcgtcttctccagccgcggacgcctctacgagtacgccaacaac 283
|| ||||| |||||||||||||| ||||||||||| |||||||| |||||| ||||||||
Sbjct: 233 gctgaggtcgcgctcgtcgtcttttccagccgcgggcgcctctatgagtactccaacaac 292
Query: 284 agtgtgaaggctacgatcgagaggtacaagaaggca 319
|| || ||||| || || ||||| ||||||||||||
Sbjct: 293 agcgtcaaggcaaccattgagagatacaagaaggca 328
>gb|AF486649.1| Hordeum vulgare subsp. vulgare AGAMOUS-like protein 2 HvAG2 (AG2)
mRNA, complete cds
Length = 1068
Score = 222 bits (112), Expect = 2e-056
Identities = 190/216 (87%)
Strand = Plus / Plus
Query: 104 atggggaggggaaggattgagatcaagaggatcgagaacaacacgagccggcaggtcacc 163
|||||||| || ||||| ||||||||| | |||||||||| |||| ||||||| |||||
Sbjct: 90 atggggagagggaggatcgagatcaagcgcatcgagaacacgacgaaccggcagctcacc 149
Query: 164 ttctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcgac 223
||||||||||||||||| || ||||| |||||||||||||||||||| || |||||||||
Sbjct: 150 ttctgcaagcgccgcaacggactcctgaagaaggcgtacgagctctcggtgctctgcgac 209
Query: 224 gccgaggtggcgctcgtcgtcttctccagccgcggacgcctctacgagtacgccaacaac 283
|| ||||| |||||||||||||| ||||||||||| |||||||| |||||| ||||||||
Sbjct: 210 gctgaggtcgcgctcgtcgtcttttccagccgcgggcgcctctatgagtactccaacaac 269
Query: 284 agtgtgaaggctacgatcgagaggtacaagaaggca 319
|| || ||||| || || ||||| ||||||||||||
Sbjct: 270 agcgtcaaggcaaccattgagagatacaagaaggca 305
>gb|BG344090.1|BG344090 HVSMEg0007K02f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0007K02f, mRNA sequence
Length = 832
Score = 220 bits (111), Expect = 8e-056
Identities = 180/203 (88%)
Strand = Plus / Plus
Query: 117 ggattgagatcaagaggatcgagaacaacacgagccggcaggtcaccttctgcaagcgcc 176
|||| ||||||||| | |||||||||| |||| ||||||||||||||||||||||||||
Sbjct: 1 ggatcgagatcaagcgcatcgagaacacgacgaaccggcaggtcaccttctgcaagcgcc 60
Query: 177 gcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcgacgccgaggtggcgc 236
|||| || ||||| |||||||||||||||||||| || ||||||||||| ||||| ||||
Sbjct: 61 gcaacggactcctgaagaaggcgtacgagctctcggtgctctgcgacgctgaggtcgcgc 120
Query: 237 tcgtcgtcttctccagccgcggacgcctctacgagtacgccaacaacagtgtgaaggcta 296
|||||||||| ||||||||||| |||||||| |||||| |||||||||| || ||||| |
Sbjct: 121 tcgtcgtcttttccagccgcgggcgcctctatgagtactccaacaacagcgtcaaggcaa 180
Query: 297 cgatcgagaggtacaagaaggca 319
| || ||||| ||||||||||||
Sbjct: 181 ccattgagagatacaagaaggca 203
>gb|CK125853.1|CK125853 BES1824111A1d09 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010D0911 5-PRIME, mRNA sequence
Length = 377
Score = 212 bits (107), Expect = 2e-053
Identities = 212/247 (85%)
Strand = Plus / Plus
Query: 405 accagatccagatgctgcaaaacactaacaggcacttggttggtgactctgtgggaaact 464
|||||||||||||||||||||||||||||| ||||||||||||||| ||||| || |||
Sbjct: 17 accagatccagatgctgcaaaacactaacaagcacttggttggtgattctgttgggaacc 76
Query: 465 tgtcactcaaagagctgaagcagctggagagccgccttgagaaaggcatctctaagatca 524
| |||||||| |||||||||||||| || |||||||| ||||||||||| | |||||||
Sbjct: 77 tatcactcaaggagctgaagcagctcgaaagccgcctcgagaaaggcattgcaaagatca 136
Query: 525 gggccaggaagagtgagctgctggctgccgagatcaattacatggccaaaagggagactg 584
|||||||||||| |||||| || || |||||||| ||||||| ||||||||||| |
Sbjct: 137 gggccaggaagaatgagctcctatcttgtgagatcaactacatggtcaaaagggagatag 196
Query: 585 agcttcagaatgaccacatgaacctcaggaccaagattgaggagggagagcaacagctgc 644
||||||||| |||| |||| | ||||| |||||||||| |||||| ||||| ||| |||
Sbjct: 197 agcttcagagtgacaacattgatctcagaaccaagattgcggagggggagcagcagttgc 256
Query: 645 agcaggt 651
|| ||||
Sbjct: 257 agaaggt 263
Score = 46.1 bits (23), Expect = 0.003
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 758 ctggacatgaagtgcttcttccc 780
|||||||||||||||||||||||
Sbjct: 313 ctggacatgaagtgcttcttccc 335
>gb|BM097203.2|BM097203 EBpi07_SQ002_L16_R pistil, 12 DPA, no treatment, cv Optic, EBpi07
Hordeum vulgare subsp. vulgare cDNA clone
EBpi07_SQ002_L16 5', mRNA sequence
Length = 524
Score = 210 bits (106), Expect = 8e-053
Identities = 163/182 (89%)
Strand = Plus / Plus
Query: 104 atggggaggggaaggattgagatcaagaggatcgagaacaacacgagccggcaggtcacc 163
|||||||| || ||||| ||||||||| | |||||||||| |||| |||||||||||||
Sbjct: 336 atggggagagggaggatcgagatcaagcgcatcgagaacacgacgaaccggcaggtcacc 395
Query: 164 ttctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcgac 223
||||||||||||||||| || ||||| |||||||||||||||||||| || |||||||||
Sbjct: 396 ttctgcaagcgccgcaacggactcctgaagaaggcgtacgagctctcggtgctctgcgac 455
Query: 224 gccgaggtggcgctcgtcgtcttctccagccgcggacgcctctacgagtacgccaacaac 283
|| ||||| |||||||||||||| ||||||||||| |||||||| |||||| ||||||||
Sbjct: 456 gctgaggtcgcgctcgtcgtcttttccagccgcgggcgcctctatgagtactccaacaac 515
Query: 284 ag 285
||
Sbjct: 516 ag 517
>gb|BU975486.1|BU975486 HB31F02r BC Hordeum vulgare subsp. vulgare cDNA clone HB31F02
5-PRIME, mRNA sequence
Length = 501
Score = 210 bits (106), Expect = 8e-053
Identities = 166/186 (89%)
Strand = Plus / Plus
Query: 134 atcgagaacaacacgagccggcaggtcaccttctgcaagcgccgcaatgggctcctcaag 193
|||||||||| |||| |||||||||||||||||||||||||||||| || ||||| |||
Sbjct: 16 atcgagaacacgacgaaccggcaggtcaccttctgcaagcgccgcaacggactcctgaag 75
Query: 194 aaggcgtacgagctctccgtcctctgcgacgccgaggtggcgctcgtcgtcttctccagc 253
||||||||||||||||| || ||||||||||| ||||| |||||||||||||| ||||||
Sbjct: 76 aaggcgtacgagctctcggtgctctgcgacgctgaggtcgcgctcgtcgtcttttccagc 135
Query: 254 cgcggacgcctctacgagtacgccaacaacagtgtgaaggctacgatcgagaggtacaag 313
||||| |||||||| |||||| |||||||||| || ||||| || || ||||| ||||||
Sbjct: 136 cgcgggcgcctctatgagtactccaacaacagcgtcaaggcaaccattgagagatacaag 195
Query: 314 aaggca 319
||||||
Sbjct: 196 aaggca 201
>gb|BI948755.1|BI948755 HVSMEl0010L12f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0010L12f, mRNA sequence
Length = 854
Score = 204 bits (103), Expect = 5e-051
Identities = 163/183 (89%)
Strand = Plus / Plus
Query: 137 gagaacaacacgagccggcaggtcaccttctgcaagcgccgcaatgggctcctcaagaag 196
||||||| |||| |||||||||||||||||||||||||||||| || ||||| ||||||
Sbjct: 171 gagaacacgacgaaccggcaggtcaccttctgcaagcgccgcaacggactcctgaagaag 230
Query: 197 gcgtacgagctctccgtcctctgcgacgccgaggtggcgctcgtcgtcttctccagccgc 256
|||||||||||||| || ||||||||||| ||||| |||||||||||||| |||||||||
Sbjct: 231 gcgtacgagctctcggtgctctgcgacgctgaggtcgcgctcgtcgtcttttccagccgc 290
Query: 257 ggacgcctctacgagtacgccaacaacagtgtgaaggctacgatcgagaggtacaagaag 316
|| |||||||| |||||| |||||||||| || ||||| || || ||||| |||||||||
Sbjct: 291 gggcgcctctatgagtactccaacaacagcgtcaaggcaaccattgagagatacaagaag 350
Query: 317 gca 319
|||
Sbjct: 351 gca 353
>gb|BG417142.1|BG417142 HVSMEk0016H10f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0016H10f, mRNA sequence
Length = 471
Score = 202 bits (102), Expect = 2e-050
Identities = 162/182 (89%)
Strand = Plus / Plus
Query: 104 atggggaggggaaggattgagatcaagaggatcgagaacaacacgagccggcaggtcacc 163
|||||||| || ||||| || |||||| | |||||||||| |||| |||||||||||||
Sbjct: 67 atggggagagggaggatcgatatcaagcgcatcgagaacacgacgaaccggcaggtcacc 126
Query: 164 ttctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcgac 223
||||||||||||||||| || ||||| |||||||||||||||||||| || |||||||||
Sbjct: 127 ttctgcaagcgccgcaacggactcctgaagaaggcgtacgagctctcggtgctctgcgac 186
Query: 224 gccgaggtggcgctcgtcgtcttctccagccgcggacgcctctacgagtacgccaacaac 283
|| ||||| |||||||||||||| ||||||||||| |||||||| |||||| ||||||||
Sbjct: 187 gctgaggtcgcgctcgtcgtcttttccagccgcgggcgcctctatgagtactccaacaac 246
Query: 284 ag 285
||
Sbjct: 247 ag 248
>gb|CA026169.1|CA026169 HZ55C06r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ55C06
5-PRIME, mRNA sequence
Length = 505
Score = 200 bits (101), Expect = 7e-050
Identities = 152/169 (89%)
Strand = Plus / Plus
Query: 151 ccggcaggtcaccttctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctctc 210
|||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||
Sbjct: 15 ccggcaggtcaccttctgcaagcgccgcaacggactcctgaagaaggcgtacgagctctc 74
Query: 211 cgtcctctgcgacgccgaggtggcgctcgtcgtcttctccagccgcggacgcctctacga 270
|| ||||||||||| ||||| |||||||||||||| ||||||||||| |||||||| ||
Sbjct: 75 ggtgctctgcgacgctgaggtcgcgctcgtcgtcttttccagccgcgggcgcctctatga 134
Query: 271 gtacgccaacaacagtgtgaaggctacgatcgagaggtacaagaaggca 319
|||| |||||||||| || ||||| || || ||||| ||||||||||||
Sbjct: 135 gtactccaacaacagcgtcaaggcaaccattgagagatacaagaaggca 183
>gb|BI948062.1|BI948062 HVSMEl0008A23f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0008A23f, mRNA sequence
Length = 825
Score = 192 bits (97), Expect = 2e-047
Identities = 151/169 (89%)
Strand = Plus / Plus
Query: 151 ccggcaggtcaccttctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctctc 210
||||||||||||||||||| |||||||||| || ||||| ||||||||||||||||||||
Sbjct: 160 ccggcaggtcaccttctgcgagcgccgcaacggactcctgaagaaggcgtacgagctctc 219
Query: 211 cgtcctctgcgacgccgaggtggcgctcgtcgtcttctccagccgcggacgcctctacga 270
|| ||||||||||| ||||| |||||||||||||| ||||||||||| |||||||| ||
Sbjct: 220 ggtgctctgcgacgctgaggtcgcgctcgtcgtcttttccagccgcgggcgcctctatga 279
Query: 271 gtacgccaacaacagtgtgaaggctacgatcgagaggtacaagaaggca 319
|||| |||||||||| || ||||| || || ||||| ||||||||||||
Sbjct: 280 gtactccaacaacagcgtcaaggcaaccattgagagatacaagaaggca 328
>gb|CA021814.1|CA021814 HZ41D07r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ41D07
5-PRIME, mRNA sequence
Length = 381
Score = 180 bits (91), Expect = 7e-044
Identities = 130/143 (90%)
Strand = Plus / Plus
Query: 104 atggggaggggaaggattgagatcaagaggatcgagaacaacacgagccggcaggtcacc 163
|||||||||||||||||||||||||||||||| ||||| | ||| ||||| ||||| |||
Sbjct: 238 atggggaggggaaggattgagatcaagaggattgagaataccactagccgccaggtgacc 297
Query: 164 ttctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcgac 223
|||||||||||||| || |||||| | |||||||| ||||||||||||||||| ||||||
Sbjct: 298 ttctgcaagcgccggaacgggctcttgaagaaggcctacgagctctccgtcctgtgcgac 357
Query: 224 gccgaggtggcgctcgtcgtctt 246
||||||||||||||| |||||||
Sbjct: 358 gccgaggtggcgctcatcgtctt 380
>gb|BU982429.1|BU982429 HA26I11r HA Hordeum vulgare subsp. vulgare cDNA clone HA26I11
5-PRIME, mRNA sequence
Length = 584
Score = 167 bits (84), Expect = 1e-039
Identities = 183/216 (84%)
Strand = Plus / Plus
Query: 103 catggggaggggaaggattgagatcaagaggatcgagaacaacacgagccggcaggtcac 162
|||||||||||| ||||| |||||||||||||||||||||| |||||||| || || ||
Sbjct: 102 catggggagggggaggatcgagatcaagaggatcgagaacacgacgagccgccaagtgac 161
Query: 163 cttctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcga 222
||||||||||||| | || ||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 162 cttctgcaagcgcaggaacgggctgctcaagaaggcctacgagctctccgtcctctgcga 221
Query: 223 cgccgaggtggcgctcgtcgtcttctccagccgcggacgcctctacgagtacgccaacaa 282
|||||| | || | ||||||||||| |||||| |||||||||||||| || | ||
Sbjct: 222 agccgagatcgccttgatcgtcttctccgcccgcggccgcctctacgagtatgctagtaa 281
Query: 283 cagtgtgaaggctacgatcgagaggtacaagaaggc 318
||| || | | |||||||| ||||||||||||||
Sbjct: 282 cagcacgaggacgacgatcgacaggtacaagaaggc 317
>gb|AY541067.1| Hordeum vulgare subsp. vulgare AGAMOUS LIKE6-like protein mRNA,
complete cds
Length = 1464
Score = 167 bits (84), Expect = 1e-039
Identities = 138/156 (88%)
Strand = Plus / Plus
Query: 103 catggggaggggaaggattgagatcaagaggatcgagaacaacacgagccggcaggtcac 162
|||||||||||||||| | || | ||| | ||||||||||| | | ||||||||||||
Sbjct: 386 catggggaggggaagggtcgaactgaagcgcatcgagaacaagatcaaccggcaggtcac 445
Query: 163 cttctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcga 222
||||| |||||||||||| || |||||||||||||| |||||||||||||| ||||||||
Sbjct: 446 cttctccaagcgccgcaacggcctcctcaagaaggcctacgagctctccgtgctctgcga 505
Query: 223 cgccgaggtggcgctcgtcgtcttctccagccgcgg 258
|||||||||||||||| || ||||||||||||||||
Sbjct: 506 cgccgaggtggcgctcatcatcttctccagccgcgg 541
>gb|BU984647.1|BU984647 HF04I23r HF Hordeum vulgare subsp. vulgare cDNA clone HF04I23
5-PRIME, mRNA sequence
Length = 649
Score = 161 bits (81), Expect = 6e-038
Identities = 114/125 (91%)
Strand = Plus / Plus
Query: 134 atcgagaacaacacgagccggcaggtcaccttctgcaagcgccgcaatgggctcctcaag 193
||||||||||| | | ||||||||||||||||| |||||||||||| || |||||||||
Sbjct: 14 atcgagaacaagatcaaccggcaggtcaccttctccaagcgccgcaacggcctcctcaag 73
Query: 194 aaggcgtacgagctctccgtcctctgcgacgccgaggtggcgctcgtcgtcttctccagc 253
||||| |||||||||||||| |||||||||||||||||||||||| || |||||||||||
Sbjct: 74 aaggcctacgagctctccgtgctctgcgacgccgaggtggcgctcatcatcttctccagc 133
Query: 254 cgcgg 258
|||||
Sbjct: 134 cgcgg 138
>gb|CK124663.1|CK124663 BES1824109o14 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010O149 5-PRIME, mRNA sequence
Length = 778
Score = 161 bits (81), Expect = 6e-038
Identities = 114/125 (91%)
Strand = Plus / Plus
Query: 134 atcgagaacaacacgagccggcaggtcaccttctgcaagcgccgcaatgggctcctcaag 193
||||||||||| | | ||||||||||||||||| |||||||||||| || |||||||||
Sbjct: 20 atcgagaacaagatcaaccggcaggtcaccttctccaagcgccgcaacggcctcctcaag 79
Query: 194 aaggcgtacgagctctccgtcctctgcgacgccgaggtggcgctcgtcgtcttctccagc 253
||||| |||||||||||||| |||||||||||||||||||||||| || |||||||||||
Sbjct: 80 aaggcctacgagctctccgtgctctgcgacgccgaggtggcgctcatcatcttctccagc 139
Query: 254 cgcgg 258
|||||
Sbjct: 140 cgcgg 144
>gb|BE195464.3|BE195464 HVSMEh0089L24f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0089L24f, mRNA sequence
Length = 786
Score = 159 bits (80), Expect = 3e-037
Identities = 182/216 (84%)
Strand = Plus / Plus
Query: 103 catggggaggggaaggattgagatcaagaggatcgagaacaacacgagccggcaggtcac 162
|||||||||||| ||||| |||||||||||||||||||||| |||||||| || || ||
Sbjct: 103 catggggagggggaggatcgagatcaagaggatcgagaacacgacgagccgccaagtgac 162
Query: 163 cttctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcga 222
||||||||||||| | || ||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 163 cttctgcaagcgcaggaacgggctgctcaagaaggcctacgagctctccgtcctctgcga 222
Query: 223 cgccgaggtggcgctcgtcgtcttctccagccgcggacgcctctacgagtacgccaacaa 282
|| ||| | || | ||||||||||| |||||| |||||||||||||| || | ||
Sbjct: 223 agcggagatcgccttgatcgtcttctccgcccgcggccgcctctacgagtatgctagtaa 282
Query: 283 cagtgtgaaggctacgatcgagaggtacaagaaggc 318
||| || | | |||||||| ||||||||||||||
Sbjct: 283 cagcacgaggacgacgatcgacaggtacaagaaggc 318
>gb|BG415259.2|BG415259 HVSMEk0005M04f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0005M04f, mRNA sequence
Length = 892
Score = 159 bits (80), Expect = 3e-037
Identities = 182/216 (84%)
Strand = Plus / Plus
Query: 103 catggggaggggaaggattgagatcaagaggatcgagaacaacacgagccggcaggtcac 162
|||||||||||| ||||| |||||||||||||||||||||| |||||||| || || ||
Sbjct: 103 catggggagggggaggatcgagatcaagaggatcgagaacacgacgagccgccaagtgac 162
Query: 163 cttctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctctccgtcctctgcga 222
||||||||||||| | || ||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 163 cttctgcaagcgcaggaacgggctgctcaagaaggcctacgagctctccgtcctctgcga 222
Query: 223 cgccgaggtggcgctcgtcgtcttctccagccgcggacgcctctacgagtacgccaacaa 282
|| ||| | || | ||||||||||| |||||| |||||||||||||| || | ||
Sbjct: 223 agcggagatcgccttgatcgtcttctccgcccgcggccgcctctacgagtatgctagtaa 282
Query: 283 cagtgtgaaggctacgatcgagaggtacaagaaggc 318
||| || | | |||||||| ||||||||||||||
Sbjct: 283 cagcacgaggacgacgatcgacaggtacaagaaggc 318
>gb|BG418830.2|BG418830 HVSMEk0024K11f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0024K11f, mRNA sequence
Length = 885
Score = 151 bits (76), Expect = 6e-035
Identities = 100/108 (92%)
Strand = Plus / Plus
Query: 151 ccggcaggtcaccttctgcaagcgccgcaatgggctcctcaagaaggcgtacgagctctc 210
||||||||||||||||| |||||||||||| || ||||| |||||||| |||||||||||
Sbjct: 9 ccggcaggtcaccttctccaagcgccgcaacggcctccttaagaaggcctacgagctctc 68
Query: 211 cgtcctctgcgacgccgaggtggcgctcgtcgtcttctccagccgcgg 258
||| |||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 69 cgtgctctgcgacgccgaggtggcgctcatcatcttctccagccgcgg 116
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 159,998
Number of Sequences: 312970
Number of extensions: 159998
Number of successful extensions: 45344
Number of sequences better than 0.5: 227
Number of HSP's better than 0.5 without gapping: 224
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 44919
Number of HSP's gapped (non-prelim): 405
length of query: 1168
length of database: 175,134,539
effective HSP length: 19
effective length of query: 1149
effective length of database: 169,188,109
effective search space: 194397137241
effective search space used: 194397137241
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)