BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3478999.2.1
(825 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BJ446926.1|BJ446926 BJ446926 K. Sato unpublished cDNA li... 507 e-142
gb|BJ452393.1|BJ452393 BJ452393 K. Sato unpublished cDNA li... 507 e-142
gb|BQ764384.1|BQ764384 EBan01_SQ005_O14_R anther, yellow st... 507 e-142
gb|BE195300.3|BE195300 HVSMEh0088N14f Hordeum vulgare 5-45 ... 496 e-139
gb|BU970263.1|BU970263 HB14C03r BC Hordeum vulgare subsp. v... 496 e-139
gb|BJ459941.1|BJ459941 BJ459941 K. Sato unpublished cDNA li... 454 e-126
gb|BU974832.1|BU974832 HB29E01r BC Hordeum vulgare subsp. v... 446 e-124
gb|BI946826.1|BI946826 HVSMEl0002G22f Hordeum vulgare spike... 444 e-123
gb|BG343325.2|BG343325 HVSMEg0005G18f Hordeum vulgare pre-a... 444 e-123
gb|AV914939.1|AV914939 AV914939 K. Sato unpublished cDNA li... 444 e-123
gb|AV933250.1|AV933250 AV933250 K. Sato unpublished cDNA li... 444 e-123
gb|AV933811.1|AV933811 AV933811 K. Sato unpublished cDNA li... 444 e-123
gb|BJ469177.1|BJ469177 BJ469177 K. Sato unpublished cDNA li... 444 e-123
gb|BJ469427.1|BJ469427 BJ469427 K. Sato unpublished cDNA li... 444 e-123
gb|BJ471269.1|BJ471269 BJ471269 K. Sato unpublished cDNA li... 444 e-123
gb|BJ471396.1|BJ471396 BJ471396 K. Sato unpublished cDNA li... 444 e-123
gb|BU988115.1|BU988115 HF16L08r HF Hordeum vulgare subsp. v... 444 e-123
gb|CA028173.1|CA028173 HZ61D09r HZ Hordeum vulgare subsp. v... 444 e-123
gb|CV054850.1|CV054850 BNEL114a3 Barley EST endosperm libra... 444 e-123
gb|CV057066.1|CV057066 BNEL23f5 Barley EST endosperm librar... 444 e-123
gb|CV058991.1|CV058991 BNEL43b9 Barley EST endosperm librar... 444 e-123
gb|CV062985.1|CV062985 BNEL85c9 Barley EST endosperm librar... 444 e-123
gb|CV063901.1|CV063901 BNEL94d7 Barley EST endosperm librar... 444 e-123
gb|CV055377.1|CV055377 BNEL119h7 Barley EST endosperm libra... 440 e-122
gb|CV057906.1|CV057906 BNEL32b7 Barley EST endosperm librar... 440 e-122
gb|BU973650.1|BU973650 HB25J10r BC Hordeum vulgare subsp. v... 438 e-121
gb|CV059929.1|CV059929 BNEL52e12 Barley EST endosperm libra... 438 e-121
gb|CV064310.1|CV064310 BNEL9E12 Barley EST endosperm librar... 436 e-121
gb|AL508760.1|AL508760 AL508760 Hordeum vulgare Barke devel... 432 e-120
gb|CV054411.1|CV054411 BNEL10C11 Barley EST endosperm libra... 432 e-120
gb|AV915127.1|AV915127 AV915127 K. Sato unpublished cDNA li... 430 e-119
gb|BE454423.1|BE454423 HVSMEh0094G14f Hordeum vulgare 5-45 ... 428 e-118
gb|BU971214.1|BU971214 HB16P06r BC Hordeum vulgare subsp. v... 428 e-118
gb|BE420881.1|BE420881 HWM003.E06 ITEC HWM Barley Leaf Libr... 420 e-116
gb|BQ470907.1|BQ470907 HX04G11r HX Hordeum vulgare subsp. v... 414 e-114
gb|BJ474003.1|BJ474003 BJ474003 K. Sato unpublished cDNA li... 408 e-112
gb|BU990501.1|BU990501 HF25D20r HF Hordeum vulgare subsp. v... 408 e-112
gb|CV063002.1|CV063002 BNEL85e3 Barley EST endosperm librar... 404 e-111
gb|AL511263.1|AL511263 AL511263 Hordeum vulgare Barke devel... 402 e-111
gb|BQ765353.1|BQ765353 EBro03_SQ006_N19_R root, 3 week, wat... 402 e-111
gb|AV920058.1|AV920058 AV920058 K. Sato unpublished cDNA li... 394 e-108
gb|AV920164.1|AV920164 AV920164 K. Sato unpublished cDNA li... 389 e-106
gb|AL508009.1|AL508009 AL508009 Hordeum vulgare Barke devel... 371 e-101
gb|BJ474724.1|BJ474724 BJ474724 K. Sato unpublished cDNA li... 365 2e-099
gb|BJ471447.1|BJ471447 BJ471447 K. Sato unpublished cDNA li... 363 6e-099
gb|CA026296.1|CA026296 HZ55I02r HZ Hordeum vulgare subsp. v... 347 4e-094
gb|BU982333.1|BU982333 HA26D10r HA Hordeum vulgare subsp. v... 333 5e-090
gb|BU999885.1|BU999885 HS17C05u HS Hordeum vulgare subsp. v... 333 5e-090
gb|CA028029.1|CA028029 HZ60M14r HZ Hordeum vulgare subsp. v... 333 5e-090
gb|CA001551.1|CA001551 HS17G11u HS Hordeum vulgare subsp. v... 331 2e-089
gb|BJ453527.1|BJ453527 BJ453527 K. Sato unpublished cDNA li... 325 1e-087
gb|BJ474040.1|BJ474040 BJ474040 K. Sato unpublished cDNA li... 323 5e-087
gb|AV935689.1|AV935689 AV935689 K. Sato unpublished cDNA li... 321 2e-086
gb|BQ470013.1|BQ470013 HX01I07T HX Hordeum vulgare subsp. v... 319 8e-086
gb|AV920259.1|AV920259 AV920259 K. Sato unpublished cDNA li... 311 2e-083
gb|AL503840.1|AL503840 AL503840 Hordeum vulgare Barke roots... 299 8e-080
gb|BF621409.2|BF621409 HVSMEa0006N07f Hordeum vulgare seedl... 299 8e-080
gb|BF628196.3|BF628196 HVSMEb0003G07f Hordeum vulgare seedl... 299 8e-080
gb|BJ451497.1|BJ451497 BJ451497 K. Sato unpublished cDNA li... 299 8e-080
gb|BM375802.2|BM375802 EBem06_SQ004_H08_R embryo, 21 DPA, n... 299 8e-080
gb|BI780033.2|BI780033 EBma08_SQ001_D13_R maternal, 28 DPA,... 299 8e-080
gb|CA019359.1|CA019359 HV11L22r HV Hordeum vulgare subsp. v... 299 8e-080
gb|CA020734.1|CA020734 HZ37H02r HZ Hordeum vulgare subsp. v... 299 8e-080
gb|CA023718.1|CA023718 HZ47D02r HZ Hordeum vulgare subsp. v... 299 8e-080
gb|BQ762997.1|BQ762997 EBro02_SQ006_G19_R root, 3 week, hyd... 291 2e-077
gb|BQ763974.1|BQ763974 EBro03_SQ005_M24_R root, 3 week, wat... 291 2e-077
gb|BF259564.2|BF259564 HVSMEf0019K17f Hordeum vulgare seedl... 287 3e-076
gb|BG365474.1|BG365474 HVSMEi0002N11f Hordeum vulgare 20 DA... 285 1e-075
gb|BJ458993.1|BJ458993 BJ458993 K. Sato unpublished cDNA li... 280 7e-074
gb|BJ448691.1|BJ448691 BJ448691 K. Sato unpublished cDNA li... 268 3e-070
gb|BJ456415.1|BJ456415 BJ456415 K. Sato unpublished cDNA li... 268 3e-070
gb|BJ473889.1|BJ473889 BJ473889 K. Sato unpublished cDNA li... 256 1e-066
gb|BU984086.1|BU984086 HA31P04r HA Hordeum vulgare subsp. v... 252 2e-065
gb|BJ454926.1|BJ454926 BJ454926 K. Sato unpublished cDNA li... 248 2e-064
gb|CV059740.1|CV059740 BNEL50d9 Barley EST endosperm librar... 240 6e-062
gb|BI953798.1|BI953798 HVSMEm0014I09f Hordeum vulgare green... 226 9e-058
gb|CA017463.1|CA017463 HV05E12r HV Hordeum vulgare subsp. v... 226 9e-058
gb|BM096730.2|BM096730 EBma07_SQ001_I06_R maternal, 21 DPA,... 224 4e-057
gb|AJ431794.1|AJ431794 AJ431794 S00002 Hordeum vulgare subs... 214 3e-054
gb|CD662904.1|CD662904 UCRHV18_03cc12_b1 Drought-stressed D... 210 5e-053
gb|BI954045.1|BI954045 HVSMEm0015P15f Hordeum vulgare green... 198 2e-049
gb|BU988488.1|BU988488 HF17M17r HF Hordeum vulgare subsp. v... 192 1e-047
gb|BU982375.1|BU982375 HA26F16r HA Hordeum vulgare subsp. v... 182 1e-044
gb|AL511916.1|AL511916 AL511916 Hordeum vulgare Barke devel... 180 5e-044
gb|CA016993.1|CA016993 HV05E12u HV Hordeum vulgare subsp. v... 178 2e-043
gb|CK124256.1|CK124256 BES1824108b24 BES1824 Hordeum vulgar... 174 3e-042
gb|BJ476089.1|BJ476089 BJ476089 K. Sato unpublished cDNA li... 165 3e-039
gb|BM376330.2|BM376330 EBma01_SQ003_D14_R maternal, 4 DPA, ... 161 4e-038
gb|CD662850.1|CD662850 UCRHV18_03bd11_b1 Drought-stressed D... 147 7e-034
gb|BI777996.2|BI777996 EBro07_SQ001_M03_R root, 3 week, red... 143 1e-032
gb|BE603075.2|BE603075 HVSMEh0101N08f Hordeum vulgare 5-45 ... 135 3e-030
gb|AV927891.1|AV927891 AV927891 K. Sato unpublished cDNA li... 133 1e-029
gb|BQ662367.1|BQ662367 HS02A19u HS Hordeum vulgare subsp. v... 127 6e-028
gb|CA015861.1|CA015861 HV11L22u HV Hordeum vulgare subsp. v... 125 2e-027
gb|BF631206.2|BF631206 HVSMEb0015E09f Hordeum vulgare seedl... 123 1e-026
gb|AL501256.1|AL501256 AL501256 Hordeum vulgare Barke roots... 113 9e-024
gb|BI954478.1|BI954478 HVSMEm0018C12f Hordeum vulgare green... 113 9e-024
gb|BQ758193.1|BQ758193 EBma01_SQ003_M17_R maternal, 4 DPA, ... 100 1e-019
gb|CX662340.1|CX662340 EST 119 Expressed sequences from Bar... 96 2e-018
gb|BQ762061.1|BQ762061 EBpi01_SQ005_O15_R pistil, 1 DPA, no... 66 2e-009
gb|CV063895.1|CV063895 BNEL94d11 Barley EST endosperm libra... 62 3e-008
gb|BU982537.1|BU982537 HA26N12r HA Hordeum vulgare subsp. v... 50 1e-004
gb|BE437581.1|BE437581 SFR005.C10F990701 ITEC SFR Barley Le... 46 0.002
gb|BE437640.1|BE437640 SFR005.H10F990715 ITEC SFR Barley Le... 46 0.002
gb|BE437781.1|BE437781 SFR007.D11F990621 ITEC SFR Barley Le... 46 0.002
gb|BE437837.1|BE437837 SFR008.A08F990625 ITEC SFR Barley Le... 46 0.002
gb|BE438041.1|BE438041 SFR010.B12F990603 ITEC SFR Barley Le... 46 0.002
gb|AL501237.1|AL501237 AL501237 Hordeum vulgare Barke roots... 46 0.002
gb|AL503819.1|AL503819 AL503819 Hordeum vulgare Barke roots... 46 0.002
gb|AL503980.1|AL503980 AL503980 Hordeum vulgare Barke roots... 46 0.002
gb|AL504973.1|AL504973 AL504973 Hordeum vulgare Barke roots... 46 0.002
gb|AL507347.1|AL507347 AL507347 Hordeum vulgare Barke devel... 46 0.002
gb|AW982445.2|AW982445 HVSMEg0003F04f Hordeum vulgare pre-a... 46 0.002
gb|BG343973.1|BG343973 HVSMEg0007E09f Hordeum vulgare pre-a... 46 0.002
gb|BI948778.1|BI948778 HVSMEl0010M15f Hordeum vulgare spike... 46 0.002
gb|BI953721.1|BI953721 HVSMEm0014A16f Hordeum vulgare green... 46 0.002
gb|BI954104.1|BI954104 HVSMEm0016D11f Hordeum vulgare green... 46 0.002
gb|BF626910.3|BF626910 HVSMEb0001K18f Hordeum vulgare seedl... 46 0.002
gb|BG300691.2|BG300691 HVSMEb0018A08f Hordeum vulgare seedl... 46 0.002
gb|AW982188.3|AW982188 HVSMEg0002C17f Hordeum vulgare pre-a... 46 0.002
gb|BG343432.2|BG343432 HVSMEg0005L22f Hordeum vulgare pre-a... 46 0.002
gb|BE196636.3|BE196636 HVSMEh0092N14f Hordeum vulgare 5-45 ... 46 0.002
gb|BF266011.3|BF266011 HV_CEa0013O18f Hordeum vulgare seedl... 46 0.002
gb|BF065276.3|BF065276 HV_CEb0024O17f Hordeum vulgare seedl... 46 0.002
gb|AV910166.1|AV910166 AV910166 K. Sato unpublished cDNA li... 46 0.002
gb|AV912344.1|AV912344 AV912344 K. Sato unpublished cDNA li... 46 0.002
gb|AV914911.1|AV914911 AV914911 K. Sato unpublished cDNA li... 46 0.002
gb|AV920029.1|AV920029 AV920029 K. Sato unpublished cDNA li... 46 0.002
gb|AV925118.1|AV925118 AV925118 K. Sato unpublished cDNA li... 46 0.002
gb|AV925974.1|AV925974 AV925974 K. Sato unpublished cDNA li... 46 0.002
gb|AV928758.1|AV928758 AV928758 K. Sato unpublished cDNA li... 46 0.002
gb|AV933987.1|AV933987 AV933987 K. Sato unpublished cDNA li... 46 0.002
gb|AV936233.1|AV936233 AV936233 K. Sato unpublished cDNA li... 46 0.002
gb|AJ460906.1|AJ460906 AJ460906 S00002 Hordeum vulgare subs... 46 0.002
gb|BJ447609.1|BJ447609 BJ447609 K. Sato unpublished cDNA li... 46 0.002
gb|BJ453561.1|BJ453561 BJ453561 K. Sato unpublished cDNA li... 46 0.002
gb|BJ453841.1|BJ453841 BJ453841 K. Sato unpublished cDNA li... 46 0.002
gb|BJ453865.1|BJ453865 BJ453865 K. Sato unpublished cDNA li... 46 0.002
gb|BJ454565.1|BJ454565 BJ454565 K. Sato unpublished cDNA li... 46 0.002
gb|BJ461104.1|BJ461104 BJ461104 K. Sato unpublished cDNA li... 46 0.002
gb|BJ461375.1|BJ461375 BJ461375 K. Sato unpublished cDNA li... 46 0.002
gb|BJ461400.1|BJ461400 BJ461400 K. Sato unpublished cDNA li... 46 0.002
gb|BJ462366.1|BJ462366 BJ462366 K. Sato unpublished cDNA li... 46 0.002
gb|BJ463937.1|BJ463937 BJ463937 K. Sato unpublished cDNA li... 46 0.002
gb|BJ466203.1|BJ466203 BJ466203 K. Sato unpublished cDNA li... 46 0.002
gb|BJ469358.1|BJ469358 BJ469358 K. Sato unpublished cDNA li... 46 0.002
gb|BJ474662.1|BJ474662 BJ474662 K. Sato unpublished cDNA li... 46 0.002
gb|BQ468719.1|BQ468719 HM02B23r HM Hordeum vulgare subsp. v... 46 0.002
gb|BQ470367.1|BQ470367 HX02L17r HX Hordeum vulgare subsp. v... 46 0.002
gb|BQ665246.1|BQ665246 HX02L17u HX Hordeum vulgare subsp. v... 46 0.002
gb|BM373261.2|BM373261 EBma04_SQ003_M04_R maternal, 10 DPA,... 46 0.002
gb|BM369955.2|BM369955 EBro08_SQ002_H11_R root, 3 week, dro... 46 0.002
gb|BQ754213.1|BQ754213 EBca01_SQ003_D10_R carpel, pre-anthe... 46 0.002
gb|BQ758413.1|BQ758413 EBma05_SQ003_B22_R maternal, 12 DPA,... 46 0.002
gb|BQ768882.1|BQ768882 EBro08_SQ012_N20_R root, 3 week, dro... 46 0.002
gb|BU970714.1|BU970714 HB15H09r BC Hordeum vulgare subsp. v... 46 0.002
gb|BU977128.1|BU977128 HA10O05r HA Hordeum vulgare subsp. v... 46 0.002
gb|BU978615.1|BU978615 HA13M01r HA Hordeum vulgare subsp. v... 46 0.002
gb|BU981329.1|BU981329 HA23F09r HA Hordeum vulgare subsp. v... 46 0.002
gb|BU985201.1|BU985201 HF06G23r HF Hordeum vulgare subsp. v... 46 0.002
gb|BU985436.1|BU985436 HF07D05r HF Hordeum vulgare subsp. v... 46 0.002
gb|BU988146.1|BU988146 HF16M17r HF Hordeum vulgare subsp. v... 46 0.002
gb|BU990314.1|BU990314 HF24K17r HF Hordeum vulgare subsp. v... 46 0.002
gb|BU990376.1|BU990376 HF24N13r HF Hordeum vulgare subsp. v... 46 0.002
gb|BU993968.1|BU993968 HM05C23r HM Hordeum vulgare subsp. v... 46 0.002
gb|BU994643.1|BU994643 HM07L14r HM Hordeum vulgare subsp. v... 46 0.002
gb|BU995686.1|BU995686 HM11A14r HM Hordeum vulgare subsp. v... 46 0.002
gb|BU997344.1|BU997344 HI07L09r HI Hordeum vulgare subsp. v... 46 0.002
gb|CA007273.1|CA007273 HU07G08r HU Hordeum vulgare subsp. v... 46 0.002
gb|CA007342.1|CA007342 HU07K05r HU Hordeum vulgare subsp. v... 46 0.002
gb|CA009276.1|CA009276 HU13K21r HU Hordeum vulgare subsp. v... 46 0.002
gb|CA020395.1|CA020395 HZ36C17r HZ Hordeum vulgare subsp. v... 46 0.002
gb|CA022152.1|CA022152 HZ42E24r HZ Hordeum vulgare subsp. v... 46 0.002
gb|CA022992.1|CA022992 HZ44O24r HZ Hordeum vulgare subsp. v... 46 0.002
gb|CA023423.1|CA023423 HZ46D06r HZ Hordeum vulgare subsp. v... 46 0.002
gb|CA023636.1|CA023636 HZ46O12r HZ Hordeum vulgare subsp. v... 46 0.002
gb|CA023678.1|CA023678 HZ47A17r HZ Hordeum vulgare subsp. v... 46 0.002
gb|CA024432.1|CA024432 HZ49E19r HZ Hordeum vulgare subsp. v... 46 0.002
gb|CA025850.1|CA025850 HZ53F05r HZ Hordeum vulgare subsp. v... 46 0.002
gb|CA026384.1|CA026384 HZ55M06r HZ Hordeum vulgare subsp. v... 46 0.002
gb|CA026487.1|CA026487 HZ56A23r HZ Hordeum vulgare subsp. v... 46 0.002
gb|CA026493.1|CA026493 HZ56B07r HZ Hordeum vulgare subsp. v... 46 0.002
gb|CA027376.1|CA027376 HZ58L15r HZ Hordeum vulgare subsp. v... 46 0.002
gb|CA027511.1|CA027511 HZ59C16r HZ Hordeum vulgare subsp. v... 46 0.002
gb|CA030318.1|CA030318 HX06L09r HX Hordeum vulgare subsp. v... 46 0.002
gb|CB858616.1|CB858616 HI07L09w HI Hordeum vulgare subsp. v... 46 0.002
gb|CB877191.1|CB877191 HP03O08T HP Hordeum vulgare subsp. v... 46 0.002
gb|CB878143.1|CB878143 HP07H19T HP Hordeum vulgare subsp. v... 46 0.002
gb|CB879838.1|CB879838 HP03O08w HP Hordeum vulgare subsp. v... 46 0.002
gb|CB880174.1|CB880174 HM05L14w HM Hordeum vulgare subsp. v... 46 0.002
gb|CB880628.1|CB880628 HM07C23w HM Hordeum vulgare subsp. v... 46 0.002
gb|CV061017.1|CV061017 BNEL64a2 Barley EST endosperm librar... 46 0.002
gb|CV061123.1|CV061123 BNEL65b9 Barley EST endosperm librar... 46 0.002
gb|CK124960.1|CK124960 BES1824111A2d04 BES1824 Hordeum vulg... 46 0.002
gb|BE411405.1|BE411405 ISC005.C05F990614 ITEC ISC Barley Le... 44 0.007
gb|AL502219.1|AL502219 AL502219 Hordeum vulgare Barke roots... 44 0.007
gb|AL502222.1|AL502222 AL502222 Hordeum vulgare Barke roots... 44 0.007
gb|AL502237.1|AL502237 AL502237 Hordeum vulgare Barke roots... 44 0.007
gb|AL504956.1|AL504956 AL504956 Hordeum vulgare Barke roots... 44 0.007
gb|BF627139.2|BF627139 HVSMEb0004A21f Hordeum vulgare seedl... 44 0.007
gb|BE216664.2|BE216664 HV_CEb0011C04f Hordeum vulgare seedl... 44 0.007
gb|BE060345.2|BE060345 HVSMEg0012A21f Hordeum vulgare pre-a... 44 0.007
gb|BM816268.1|BM816268 HB106A01_SK.ab1 HB Hordeum vulgare s... 44 0.007
gb|BM816269.1|BM816269 HC111A07_T3.ab1 HC Hordeum vulgare s... 44 0.007
gb|AJ432697.1|AJ432697 AJ432697 S00002 Hordeum vulgare subs... 44 0.007
gb|BJ454573.1|BJ454573 BJ454573 K. Sato unpublished cDNA li... 44 0.007
gb|BJ462374.1|BJ462374 BJ462374 K. Sato unpublished cDNA li... 44 0.007
gb|BQ472182.1|BQ472182 HV04K12r HV Hordeum vulgare subsp. v... 44 0.007
gb|BQ657579.1|BQ657579 HA07M23u HA Hordeum vulgare subsp. v... 44 0.007
gb|BM097801.2|BM097801 EBem04_SQ002_L21_R embryo, 12 DPA, n... 44 0.007
gb|BM377895.2|BM377895 EBem04_SQ004_I05_R embryo, 12 DPA, n... 44 0.007
gb|BM373918.2|BM373918 EBma03_SQ003_B21_R maternal, 8 DPA, ... 44 0.007
gb|BM443458.2|BM443458 EBro02_SQ005_D21_R root, 3 week, hyd... 44 0.007
gb|BM443464.2|BM443464 EBro02_SQ005_E08_R root, 3 week, hyd... 44 0.007
gb|BI777284.2|BI777284 EBro03_SQ002_L15_R root, 3 week, wat... 44 0.007
gb|BQ763899.1|BQ763899 EBro03_SQ005_P13_R root, 3 week, wat... 44 0.007
gb|BQ764068.1|BQ764068 EBro03_SQ006_N06_R root, 3 week, wat... 44 0.007
gb|BQ766824.1|BQ766824 EBro08_SQ007_P03_R root, 3 week, dro... 44 0.007
gb|BQ768000.1|BQ768000 EBro08_SQ010_M08 _R root, 3 week, dr... 44 0.007
gb|BU973089.1|BU973089 HB23L12r BC Hordeum vulgare subsp. v... 44 0.007
gb|BU978223.1|BU978223 HA12M15r HA Hordeum vulgare subsp. v... 44 0.007
gb|BU978224.1|BU978224 HA12M15u HA Hordeum vulgare subsp. v... 44 0.007
gb|CA022255.1|CA022255 HZ42J15r HZ Hordeum vulgare subsp. v... 44 0.007
gb|CA027533.1|CA027533 HZ59D17r HZ Hordeum vulgare subsp. v... 44 0.007
gb|CA030379.1|CA030379 HX06O05r HX Hordeum vulgare subsp. v... 44 0.007
gb|CB874970.1|CB874970 HX06O05w HX Hordeum vulgare subsp. v... 44 0.007
gb|AJ463340.1|AJ463340 AJ463340 S00002 Hordeum vulgare subs... 42 0.028
gb|BE437464.1|BE437464 SFR004.A06F990621 ITEC SFR Barley Le... 40 0.11
gb|AL502256.1|AL502256 AL502256 Hordeum vulgare Barke roots... 40 0.11
gb|BU977129.1|BU977129 HA10O05u HA Hordeum vulgare subsp. v... 38 0.44
>gb|BJ446926.1|BJ446926 BJ446926 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak15g01 5', mRNA sequence
Length = 623
Score = 507 bits (256), Expect = e-142
Identities = 397/444 (89%)
Strand = Plus / Plus
Query: 51 ttccatggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcag 110
|||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct: 32 ttccatggccaacagcaacctcccgcgccggatcatcaaggagacgcagcggctgctcag 91
Query: 111 cgaaccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgt 170
||| |||||||||||||| ||||| |||||||| || ||||||||||| |||||||||||
Sbjct: 92 cgagccagcgccggggatcagcgcctcgccgtccgaggagaacatgcgctacttcaatgt 151
Query: 171 catgatccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctatt 230
|||| ||||||||||||| ||||| ||||| ||||||||||| ||||||||||| || ||
Sbjct: 152 catggtccttggccccgcgcagtcgccctacgaaggtggagtcttcaagcttgaactttt 211
Query: 231 cttgcctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttacca 290
||| || ||||||||||| |||||||| || |||||||||||||| || ||||| |||||
Sbjct: 212 cttacccgaggaatatccgatggctgctcctaaagttaggtttctgacaaaaatatacca 271
Query: 291 tccgaacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcc 350
|| |||||||||||||||||||| |||||||||||||| || |||||||| ||||||||
Sbjct: 272 ccccaacattgacaagcttggtagaatatgcctcgacatcctgaaggacaagtggagtcc 331
Query: 351 cgctcttcagatacgtacagttctgctcagcattcaggcacttctgagtgccccaaatcc 410
|||||||||||||| || ||||| | |||||||||||||| ||||| || ||||| ||
Sbjct: 332 agctcttcagatacgcactgttcttttgagcattcaggcactgctgagcgctccaaaccc 391
Query: 411 agatgatcctctctcagacaacattgcgaaacactggaaatcaaatgaagctgaagcttt 470
|||||||||||||||||| || | || |||||||||||||| ||||||||||||||| |
Sbjct: 392 agatgatcctctctcagagaatgtcgcaaaacactggaaatccaatgaagctgaagctgt 451
Query: 471 tgagacagcgaaggagtggactcg 494
||||||||||||||| ||||||||
Sbjct: 452 tgagacagcgaaggaatggactcg 475
>gb|BJ452393.1|BJ452393 BJ452393 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak38n17 5', mRNA sequence
Length = 694
Score = 507 bits (256), Expect = e-142
Identities = 397/444 (89%)
Strand = Plus / Plus
Query: 51 ttccatggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcag 110
|||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct: 21 ttccatggccaacagcaacctcccgcgccggatcatcaaggagacgcagcggctgctcag 80
Query: 111 cgaaccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgt 170
||| |||||||||||||| ||||| |||||||| || ||||||||||| |||||||||||
Sbjct: 81 cgagccagcgccggggatcagcgcctcgccgtccgaggagaacatgcgctacttcaatgt 140
Query: 171 catgatccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctatt 230
|||| ||||||||||||| ||||| ||||| ||||||||||| ||||||||||| || ||
Sbjct: 141 catggtccttggccccgcgcagtcgccctacgaaggtggagtcttcaagcttgaactttt 200
Query: 231 cttgcctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttacca 290
||| || ||||||||||| |||||||| || |||||||||||||| || ||||| |||||
Sbjct: 201 cttacccgaggaatatccgatggctgctcctaaagttaggtttctgacaaaaatatacca 260
Query: 291 tccgaacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcc 350
|| |||||||||||||||||||| |||||||||||||| || |||||||| ||||||||
Sbjct: 261 ccccaacattgacaagcttggtagaatatgcctcgacatcctgaaggacaagtggagtcc 320
Query: 351 cgctcttcagatacgtacagttctgctcagcattcaggcacttctgagtgccccaaatcc 410
|||||||||||||| || ||||| | |||||||||||||| ||||| || ||||| ||
Sbjct: 321 agctcttcagatacgcactgttcttttgagcattcaggcactgctgagcgctccaaaccc 380
Query: 411 agatgatcctctctcagacaacattgcgaaacactggaaatcaaatgaagctgaagcttt 470
|||||||||||||||||| || | || |||||||||||||| ||||||||||||||| |
Sbjct: 381 agatgatcctctctcagagaatgtcgcaaaacactggaaatccaatgaagctgaagctgt 440
Query: 471 tgagacagcgaaggagtggactcg 494
||||||||||||||| ||||||||
Sbjct: 441 tgagacagcgaaggaatggactcg 464
>gb|BQ764384.1|BQ764384 EBan01_SQ005_O14_R anther, yellow stage, no treatment, cv Optic,
EBan01 Hordeum vulgare subsp. vulgare cDNA clone
EBan01_SQ005_O14 5', mRNA sequence
Length = 620
Score = 507 bits (256), Expect = e-142
Identities = 397/444 (89%)
Strand = Plus / Plus
Query: 51 ttccatggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcag 110
|||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct: 32 ttccatggccaacagcaacctcccgcgccggatcatcaaggagacgcagcggctgctcag 91
Query: 111 cgaaccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgt 170
||| |||||||||||||| ||||| |||||||| || ||||||||||| |||||||||||
Sbjct: 92 cgagccagcgccggggatcagcgcctcgccgtccgaggagaacatgcgctacttcaatgt 151
Query: 171 catgatccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctatt 230
|||| ||||||||||||| ||||| ||||| ||||||||||| ||||||||||| || ||
Sbjct: 152 catggtccttggccccgcgcagtcgccctacgaaggtggagtcttcaagcttgaactttt 211
Query: 231 cttgcctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttacca 290
||| || ||||||||||| |||||||| || |||||||||||||| || ||||| |||||
Sbjct: 212 cttacccgaggaatatccgatggctgctcctaaagttaggtttctgacaaaaatatacca 271
Query: 291 tccgaacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcc 350
|| |||||||||||||||||||| |||||||||||||| || |||||||| ||||||||
Sbjct: 272 ccccaacattgacaagcttggtagaatatgcctcgacatcctgaaggacaagtggagtcc 331
Query: 351 cgctcttcagatacgtacagttctgctcagcattcaggcacttctgagtgccccaaatcc 410
|||||||||||||| || ||||| | |||||||||||||| ||||| || ||||| ||
Sbjct: 332 agctcttcagatacgcactgttcttttgagcattcaggcactgctgagcgctccaaaccc 391
Query: 411 agatgatcctctctcagacaacattgcgaaacactggaaatcaaatgaagctgaagcttt 470
|||||||||||||||||| || | || |||||||||||||| ||||||||||||||| |
Sbjct: 392 agatgatcctctctcagagaatgtcgcaaaacactggaaatccaatgaagctgaagctgt 451
Query: 471 tgagacagcgaaggagtggactcg 494
||||||||||||||| ||||||||
Sbjct: 452 tgagacagcgaaggaatggactcg 475
>gb|BE195300.3|BE195300 HVSMEh0088N14f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0088N14f, mRNA sequence
Length = 624
Score = 496 bits (250), Expect = e-139
Identities = 395/444 (88%)
Strand = Plus / Plus
Query: 51 ttccatggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcag 110
|||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct: 35 ttccatggccaacagcaacctcccgcgccggatcatcaaggagacgcagcggctgctcag 94
Query: 111 cgaaccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgt 170
||| |||||||||||||| ||||| |||||||| || ||||||||||| |||||||||||
Sbjct: 95 cgagccagcgccggggatcagcgcctcgccgtccgaggagaacatgcgctacttcaatgt 154
Query: 171 catgatccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctatt 230
|||| ||||||||||||| ||||| ||||| ||||||||||| ||||||||||| || ||
Sbjct: 155 catggtccttggccccgcgcagtcgccctacgaaggtggagtcttcaagcttgaactttt 214
Query: 231 cttgcctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttacca 290
||| || ||||||||||| |||||||| || |||||||||||||| || ||||| |||||
Sbjct: 215 cttacccgaggaatatccgatggctgctcctaaagttaggtttctgacaaaaatatacca 274
Query: 291 tccgaacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcc 350
|| |||||||||||||||||||| |||||||||||||| || |||||||| ||||||||
Sbjct: 275 ccccaacattgacaagcttggtagaatatgcctcgacatcctgaaggacaagtggagtcc 334
Query: 351 cgctcttcagatacgtacagttctgctcagcattcaggcacttctgagtgccccaaatcc 410
|||||||||||||| || ||||| | |||||||||||||| ||||| || ||||| ||
Sbjct: 335 agctcttcagatacgcactgttcttttgagcattcaggcactgctgagcgctccaaaccc 394
Query: 411 agatgatcctctctcagacaacattgcgaaacactggaaatcaaatgaagctgaagcttt 470
|||||||||||||||||| || | || ||||||||||||| |||||||||||||||
Sbjct: 395 agatgatcctctctcagagaatgtcgcanaacactggaaatccaatgaagctgaagctng 454
Query: 471 tgagacagcgaaggagtggactcg 494
||||||||||||||| ||||||||
Sbjct: 455 tgagacagcgaaggaatggactcg 478
>gb|BU970263.1|BU970263 HB14C03r BC Hordeum vulgare subsp. vulgare cDNA clone HB14C03
5-PRIME, mRNA sequence
Length = 621
Score = 496 bits (250), Expect = e-139
Identities = 391/438 (89%)
Strand = Plus / Plus
Query: 57 ggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcagcgaacc 116
|||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||
Sbjct: 34 ggccaacagcaacctcccgcgccggatcatcaaggagacgcagcggctgctcagcgagcc 93
Query: 117 agcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgtcatgat 176
|||||||||||| ||||| |||||||| || ||||||||||| ||||||||||||||| |
Sbjct: 94 agcgccggggatcagcgcctcgccgtccgaggagaacatgcgctacttcaatgtcatggt 153
Query: 177 ccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctattcttgcc 236
|||||||||||| ||||| ||||| ||||||||||| ||||||||||| || ||||| ||
Sbjct: 154 ccttggccccgcgcagtcgccctacgaaggtggagtcttcaagcttgaacttttcttacc 213
Query: 237 tgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttaccatccgaa 296
||||||||||| |||||||| || |||||||||||||| || ||||| ||||| || ||
Sbjct: 214 cgaggaatatccgatggctgctcctaaagttaggtttctgacaaaaatataccaccccaa 273
Query: 297 cattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcccgctct 356
|||||||||||||||||| |||||||||||||| || |||||||| |||||||| |||||
Sbjct: 274 cattgacaagcttggtagaatatgcctcgacatcctgaaggacaagtggagtccagctct 333
Query: 357 tcagatacgtacagttctgctcagcattcaggcacttctgagtgccccaaatccagatga 416
||||||||| || ||||| | |||||||||||||| ||||| || ||||| ||||||||
Sbjct: 334 tcagatacgcactgttcttttgagcattcaggcactgctgagcgctccaaacccagatga 393
Query: 417 tcctctctcagacaacattgcgaaacactggaaatcaaatgaagctgaagcttttgagac 476
|||||||||||| || | || |||||||||||||| ||||||||||||||| |||||||
Sbjct: 394 tcctctctcagagaatgtcgcaaaacactggaaatccaatgaagctgaagctgttgagac 453
Query: 477 agcgaaggagtggactcg 494
||||||||| ||||||||
Sbjct: 454 agcgaaggaatggactcg 471
>gb|BJ459941.1|BJ459941 BJ459941 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak38n17 3', mRNA sequence
Length = 677
Score = 454 bits (229), Expect = e-126
Identities = 367/413 (88%)
Strand = Plus / Minus
Query: 82 atcatcaaggagacgcagcggctcctcagcgaaccagcgccggggattagcgcgtcgccg 141
||||||||||||||||||||||| |||||||| |||||||||||||| ||||| ||||||
Sbjct: 676 atcatcaaggagacgcagcggctgctcagcgagccagcgccggggatcagcgcctcgccg 617
Query: 142 tcggaagagaacatgcggtacttcaatgtcatgatccttggccccgcacagtcaccctat 201
|| || ||||||||||| ||||||||||||||| ||||||||||||| ||||| |||||
Sbjct: 616 tccgaggagaacatgcgctacttcaatgtcatggtccttggccccgcgcagtcgccctac 557
Query: 202 gaaggtggagttttcaagcttgagctattcttgcctgaggaatatccaatggctgccccg 261
||||||||||| ||||||||||| || ||||| || ||||||||||| |||||||| ||
Sbjct: 556 gaaggtggagtcttcaagcttgaacttttcttacccgaggaatatccgatggctgctcct 497
Query: 262 aaagttaggtttctcaccaaaatttaccatccgaacattgacaagcttggtaggatatgc 321
|||||||||||||| || ||||| ||||| || |||||||||||||||||||| ||||||
Sbjct: 496 aaagttaggtttctgacaaaaatataccaccccaacattgacaagcttggtagaatatgc 437
Query: 322 ctcgacattcttaaggacaaatggagtcccgctcttcagatacgtacagttctgctcagc 381
|||||||| || |||||||| |||||||| |||||||||||||| || ||||| | |||
Sbjct: 436 ctcgacatcctgaaggacaagtggagtccagctcttcagatacgcactgttcttttgagc 377
Query: 382 attcaggcacttctgagtgccccaaatccagatgatcctctctcagacaacattgcgaaa 441
||||||||||| ||||| || ||||| |||||||||||||||||||| || | || |||
Sbjct: 376 attcaggcactgctgagcgctccaaacccagatgatcctctctcagagaatgtcgcaaaa 317
Query: 442 cactggaaatcaaatgaagctgaagcttttgagacagcgaaggagtggactcg 494
||||||||||| ||||||||||||||| |||||||||||||||| ||||||||
Sbjct: 316 cactggaaatccaatgaagctgaagctgttgagacagcgaaggaatggactcg 264
>gb|BU974832.1|BU974832 HB29E01r BC Hordeum vulgare subsp. vulgare cDNA clone HB29E01
5-PRIME, mRNA sequence
Length = 425
Score = 446 bits (225), Expect = e-124
Identities = 360/405 (88%)
Strand = Plus / Plus
Query: 62 acagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcagcgaaccagcgc 121
||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||||||
Sbjct: 21 acagcaacctcccgcgccggatcatcaaggagacgcagcggctgctcagcgagccagcgc 80
Query: 122 cggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgtcatgatccttg 181
||||||| ||||| |||||||| || ||||||||||| ||||||||||||||| ||||||
Sbjct: 81 cggggatcagcgcctcgccgtccgaggagaacatgcgctacttcaatgtcatggtccttg 140
Query: 182 gccccgcacagtcaccctatgaaggtggagttttcaagcttgagctattcttgcctgagg 241
||||||| ||||| ||||| ||||||||||| ||||||||||| || ||||| || ||||
Sbjct: 141 gccccgcgcagtcgccctacgaaggtggagtcttcaagcttgaacttttcttacccgagg 200
Query: 242 aatatccaatggctgccccgaaagttaggtttctcaccaaaatttaccatccgaacattg 301
||||||| |||||||| || |||||||||||||| || ||||| ||||| || |||||||
Sbjct: 201 aatatccgatggctgctcctaaagttaggtttctgacaaaaatataccaccccaacattg 260
Query: 302 acaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcccgctcttcaga 361
||||||||||||| |||||||||||||| || |||||||| |||||||| ||||||||||
Sbjct: 261 acaagcttggtagaatatgcctcgacatcctgaaggacaagtggagtccagctcttcaga 320
Query: 362 tacgtacagttctgctcagcattcaggcacttctgagtgccccaaatccagatgatcctc 421
|||| || ||||| | |||||||||||||| ||||| || ||||| |||||||||||||
Sbjct: 321 tacgcactgttcttttgagcattcaggcactgctgagcgctccaaacccagatgatcctc 380
Query: 422 tctcagacaacattgcgaaacactggaaatcaaatgaagctgaag 466
||||||| || | || |||||||||||||| |||||||||||||
Sbjct: 381 tctcagagaatgtcgcaaaacactggaaatccaatgaagctgaag 425
>gb|BI946826.1|BI946826 HVSMEl0002G22f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0002G22f, mRNA sequence
Length = 829
Score = 444 bits (224), Expect = e-123
Identities = 401/460 (87%)
Strand = Plus / Plus
Query: 55 atggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcagcgaa 114
||||||||||||||||||||||| ||||||||||||||||||||| | |||||||||||
Sbjct: 80 atggccaacagcaacctcccgcgacgaatcatcaaggagacgcagagactcctcagcgag 139
Query: 115 ccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgtcatg 174
||||| |||||||||||||| ||||| ||||| |||||||||||||| ||||| ||||||
Sbjct: 140 ccagctccggggattagcgcttcgccctcggaggagaacatgcggtatttcaacgtcatg 199
Query: 175 atccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctattcttg 234
|||||||| || || ||||| ||||| ||||| |||||||| ||||| || ||||| ||
Sbjct: 200 atccttgggccggcgcagtcgccctacgaagggggagtttttaagctggaactattttta 259
Query: 235 cctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttaccatccg 294
|| ||||||||||| ||||||||||| || ||||||||||| |||||||| || |||||
Sbjct: 260 cccgaggaatatccgatggctgccccaaaggttaggtttctgaccaaaatatatcatccc 319
Query: 295 aacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcccgct 354
||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||| |||
Sbjct: 320 aacattgacaagcttggtaggatatgccttgacattctcaaggataaatggagtccggct 379
Query: 355 cttcagatacgtacagttctgctcagcattcaggcacttctgagtgccccaaatccagat 414
|||||||| || |||||||| | || || |||||||| | ||||| ||||||||||||
Sbjct: 380 cttcagattcgaacagttcttttgagtatccaggcactcttaagtgcaccaaatccagat 439
Query: 415 gatcctctctcagacaacattgcgaaacactggaaatcaaatgaagctgaagcttttgag 474
|| |||||||| || |||||||| || ||||||||||| ||||| || |||||| ||||
Sbjct: 440 gaccctctctctgaaaacattgccaagcactggaaatccaatgaggcagaagctgttgaa 499
Query: 475 acagcgaaggagtggactcgcctgtatgcaagtggggcat 514
||||||||||||||||| || ||||| || ||||| ||||
Sbjct: 500 acagcgaaggagtggacccgtctgtacgccagtggtgcat 539
>gb|BG343325.2|BG343325 HVSMEg0005G18f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0005G18f, mRNA sequence
Length = 973
Score = 444 bits (224), Expect = e-123
Identities = 401/460 (87%)
Strand = Plus / Plus
Query: 55 atggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcagcgaa 114
||||||||||||||||||||||| ||||||||||||||||||||| | |||||||||||
Sbjct: 74 atggccaacagcaacctcccgcgacgaatcatcaaggagacgcagagactcctcagcgag 133
Query: 115 ccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgtcatg 174
||||| |||||||||||||| ||||| ||||| |||||||||||||| ||||| ||||||
Sbjct: 134 ccagctccggggattagcgcttcgccctcggaggagaacatgcggtatttcaacgtcatg 193
Query: 175 atccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctattcttg 234
|||||||| || || ||||| ||||| ||||| |||||||| ||||| || ||||| ||
Sbjct: 194 atccttgggccggcgcagtcgccctacgaagggggagtttttaagctggaactattttta 253
Query: 235 cctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttaccatccg 294
|| ||||||||||| ||||||||||| || ||||||||||| |||||||| || |||||
Sbjct: 254 cccgaggaatatccgatggctgccccaaaggttaggtttctgaccaaaatatatcatccc 313
Query: 295 aacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcccgct 354
||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||| |||
Sbjct: 314 aacattgacaagcttggtaggatatgccttgacattctcaaggataaatggagtccggct 373
Query: 355 cttcagatacgtacagttctgctcagcattcaggcacttctgagtgccccaaatccagat 414
|||||||| || |||||||| | || || |||||||| | ||||| ||||||||||||
Sbjct: 374 cttcagattcgaacagttcttttgagtatccaggcactcttaagtgcaccaaatccagat 433
Query: 415 gatcctctctcagacaacattgcgaaacactggaaatcaaatgaagctgaagcttttgag 474
|| |||||||| || |||||||| || ||||||||||| ||||| || |||||| ||||
Sbjct: 434 gaccctctctctgaaaacattgccaagcactggaaatccaatgaggcagaagctgttgaa 493
Query: 475 acagcgaaggagtggactcgcctgtatgcaagtggggcat 514
||||||||||||||||| || ||||| || ||||| ||||
Sbjct: 494 acagcgaaggagtggacccgtctgtacgccagtggtgcat 533
>gb|AV914939.1|AV914939 AV914939 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags9b20 5', mRNA sequence
Length = 612
Score = 444 bits (224), Expect = e-123
Identities = 401/460 (87%)
Strand = Plus / Plus
Query: 55 atggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcagcgaa 114
||||||||||||||||||||||| ||||||||||||||||||||| | |||||||||||
Sbjct: 130 atggccaacagcaacctcccgcgacgaatcatcaaggagacgcagagactcctcagcgag 189
Query: 115 ccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgtcatg 174
||||| |||||||||||||| ||||| ||||| |||||||||||||| ||||| ||||||
Sbjct: 190 ccagctccggggattagcgcttcgccctcggaggagaacatgcggtatttcaacgtcatg 249
Query: 175 atccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctattcttg 234
|||||||| || || ||||| ||||| ||||| |||||||| ||||| || ||||| ||
Sbjct: 250 atccttgggccggcgcagtcgccctacgaagggggagtttttaagctggaactattttta 309
Query: 235 cctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttaccatccg 294
|| ||||||||||| ||||||||||| || ||||||||||| |||||||| || |||||
Sbjct: 310 cccgaggaatatccgatggctgccccaaaggttaggtttctgaccaaaatatatcatccc 369
Query: 295 aacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcccgct 354
||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||| |||
Sbjct: 370 aacattgacaagcttggtaggatatgccttgacattctcaaggataaatggagtccggct 429
Query: 355 cttcagatacgtacagttctgctcagcattcaggcacttctgagtgccccaaatccagat 414
|||||||| || |||||||| | || || |||||||| | ||||| ||||||||||||
Sbjct: 430 cttcagattcgaacagttcttttgagtatccaggcactcttaagtgcaccaaatccagat 489
Query: 415 gatcctctctcagacaacattgcgaaacactggaaatcaaatgaagctgaagcttttgag 474
|| |||||||| || |||||||| || ||||||||||| ||||| || |||||| ||||
Sbjct: 490 gaccctctctctgaaaacattgccaagcactggaaatccaatgaggcagaagctgttgaa 549
Query: 475 acagcgaaggagtggactcgcctgtatgcaagtggggcat 514
||||||||||||||||| || ||||| || ||||| ||||
Sbjct: 550 acagcgaaggagtggacccgtctgtacgccagtggtgcat 589
>gb|AV933250.1|AV933250 AV933250 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal5p21 5', mRNA sequence
Length = 593
Score = 444 bits (224), Expect = e-123
Identities = 401/460 (87%)
Strand = Plus / Plus
Query: 55 atggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcagcgaa 114
||||||||||||||||||||||| ||||||||||||||||||||| | |||||||||||
Sbjct: 74 atggccaacagcaacctcccgcgacgaatcatcaaggagacgcagagactcctcagcgag 133
Query: 115 ccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgtcatg 174
||||| |||||||||||||| ||||| ||||| |||||||||||||| ||||| ||||||
Sbjct: 134 ccagctccggggattagcgcttcgccctcggaggagaacatgcggtatttcaacgtcatg 193
Query: 175 atccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctattcttg 234
|||||||| || || ||||| ||||| ||||| |||||||| ||||| || ||||| ||
Sbjct: 194 atccttgggccggcgcagtcgccctacgaagggggagtttttaagctggaactattttta 253
Query: 235 cctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttaccatccg 294
|| ||||||||||| ||||||||||| || ||||||||||| |||||||| || |||||
Sbjct: 254 cccgaggaatatccgatggctgccccaaaggttaggtttctgaccaaaatatatcatccc 313
Query: 295 aacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcccgct 354
||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||| |||
Sbjct: 314 aacattgacaagcttggtaggatatgccttgacattctcaaggataaatggagtccggct 373
Query: 355 cttcagatacgtacagttctgctcagcattcaggcacttctgagtgccccaaatccagat 414
|||||||| || |||||||| | || || |||||||| | ||||| ||||||||||||
Sbjct: 374 cttcagattcgaacagttcttttgagtatccaggcactcttaagtgcaccaaatccagat 433
Query: 415 gatcctctctcagacaacattgcgaaacactggaaatcaaatgaagctgaagcttttgag 474
|| |||||||| || |||||||| || ||||||||||| ||||| || |||||| ||||
Sbjct: 434 gaccctctctctgaaaacattgccaagcactggaaatccaatgaggcagaagctgttgaa 493
Query: 475 acagcgaaggagtggactcgcctgtatgcaagtggggcat 514
||||||||||||||||| || ||||| || ||||| ||||
Sbjct: 494 acagcgaaggagtggacccgtctgtacgccagtggtgcat 533
>gb|AV933811.1|AV933811 AV933811 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal9g04 5', mRNA sequence
Length = 605
Score = 444 bits (224), Expect = e-123
Identities = 401/460 (87%)
Strand = Plus / Plus
Query: 55 atggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcagcgaa 114
||||||||||||||||||||||| ||||||||||||||||||||| | |||||||||||
Sbjct: 73 atggccaacagcaacctcccgcgacgaatcatcaaggagacgcagagactcctcagcgag 132
Query: 115 ccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgtcatg 174
||||| |||||||||||||| ||||| ||||| |||||||||||||| ||||| ||||||
Sbjct: 133 ccagctccggggattagcgcttcgccctcggaggagaacatgcggtatttcaacgtcatg 192
Query: 175 atccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctattcttg 234
|||||||| || || ||||| ||||| ||||| |||||||| ||||| || ||||| ||
Sbjct: 193 atccttgggccggcgcagtcgccctacgaagggggagtttttaagctggaactattttta 252
Query: 235 cctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttaccatccg 294
|| ||||||||||| ||||||||||| || ||||||||||| |||||||| || |||||
Sbjct: 253 cccgaggaatatccgatggctgccccaaaggttaggtttctgaccaaaatatatcatccc 312
Query: 295 aacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcccgct 354
||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||| |||
Sbjct: 313 aacattgacaagcttggtaggatatgccttgacattctcaaggataaatggagtccggct 372
Query: 355 cttcagatacgtacagttctgctcagcattcaggcacttctgagtgccccaaatccagat 414
|||||||| || |||||||| | || || |||||||| | ||||| ||||||||||||
Sbjct: 373 cttcagattcgaacagttcttttgagtatccaggcactcttaagtgcaccaaatccagat 432
Query: 415 gatcctctctcagacaacattgcgaaacactggaaatcaaatgaagctgaagcttttgag 474
|| |||||||| || |||||||| || ||||||||||| ||||| || |||||| ||||
Sbjct: 433 gaccctctctctgaaaacattgccaagcactggaaatccaatgaggcagaagctgttgaa 492
Query: 475 acagcgaaggagtggactcgcctgtatgcaagtggggcat 514
||||||||||||||||| || ||||| || ||||| ||||
Sbjct: 493 acagcgaaggagtggacccgtctgtacgccagtggtgcat 532
>gb|BJ469177.1|BJ469177 BJ469177 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal13i18 5', mRNA sequence
Length = 605
Score = 444 bits (224), Expect = e-123
Identities = 401/460 (87%)
Strand = Plus / Plus
Query: 55 atggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcagcgaa 114
||||||||||||||||||||||| ||||||||||||||||||||| | |||||||||||
Sbjct: 83 atggccaacagcaacctcccgcgacgaatcatcaaggagacgcagagactcctcagcgag 142
Query: 115 ccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgtcatg 174
||||| |||||||||||||| ||||| ||||| |||||||||||||| ||||| ||||||
Sbjct: 143 ccagctccggggattagcgcttcgccctcggaggagaacatgcggtatttcaacgtcatg 202
Query: 175 atccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctattcttg 234
|||||||| || || ||||| ||||| ||||| |||||||| ||||| || ||||| ||
Sbjct: 203 atccttgggccggcgcagtcgccctacgaagggggagtttttaagctggaactattttta 262
Query: 235 cctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttaccatccg 294
|| ||||||||||| ||||||||||| || ||||||||||| |||||||| || |||||
Sbjct: 263 cccgaggaatatccgatggctgccccaaaggttaggtttctgaccaaaatatatcatccc 322
Query: 295 aacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcccgct 354
||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||| |||
Sbjct: 323 aacattgacaagcttggtaggatatgccttgacattctcaaggataaatggagtccggct 382
Query: 355 cttcagatacgtacagttctgctcagcattcaggcacttctgagtgccccaaatccagat 414
|||||||| || |||||||| | || || |||||||| | ||||| ||||||||||||
Sbjct: 383 cttcagattcgaacagttcttttgagtatccaggcactcttaagtgcaccaaatccagat 442
Query: 415 gatcctctctcagacaacattgcgaaacactggaaatcaaatgaagctgaagcttttgag 474
|| |||||||| || |||||||| || ||||||||||| ||||| || |||||| ||||
Sbjct: 443 gaccctctctctgaaaacattgccaagcactggaaatccaatgaggcagaagctgttgaa 502
Query: 475 acagcgaaggagtggactcgcctgtatgcaagtggggcat 514
||||||||||||||||| || ||||| || ||||| ||||
Sbjct: 503 acagcgaaggagtggacccgtctgtacgccagtggtgcat 542
>gb|BJ469427.1|BJ469427 BJ469427 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal20p06 5', mRNA sequence
Length = 695
Score = 444 bits (224), Expect = e-123
Identities = 401/460 (87%)
Strand = Plus / Plus
Query: 55 atggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcagcgaa 114
||||||||||||||||||||||| ||||||||||||||||||||| | |||||||||||
Sbjct: 73 atggccaacagcaacctcccgcgacgaatcatcaaggagacgcagagactcctcagcgag 132
Query: 115 ccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgtcatg 174
||||| |||||||||||||| ||||| ||||| |||||||||||||| ||||| ||||||
Sbjct: 133 ccagctccggggattagcgcttcgccctcggaggagaacatgcggtatttcaacgtcatg 192
Query: 175 atccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctattcttg 234
|||||||| || || ||||| ||||| ||||| |||||||| ||||| || ||||| ||
Sbjct: 193 atccttgggccggcgcagtcgccctacgaagggggagtttttaagctggaactattttta 252
Query: 235 cctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttaccatccg 294
|| ||||||||||| ||||||||||| || ||||||||||| |||||||| || |||||
Sbjct: 253 cccgaggaatatccgatggctgccccaaaggttaggtttctgaccaaaatatatcatccc 312
Query: 295 aacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcccgct 354
||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||| |||
Sbjct: 313 aacattgacaagcttggtaggatatgccttgacattctcaaggataaatggagtccggct 372
Query: 355 cttcagatacgtacagttctgctcagcattcaggcacttctgagtgccccaaatccagat 414
|||||||| || |||||||| | || || |||||||| | ||||| ||||||||||||
Sbjct: 373 cttcagattcgaacagttcttttgagtatccaggcactcttaagtgcaccaaatccagat 432
Query: 415 gatcctctctcagacaacattgcgaaacactggaaatcaaatgaagctgaagcttttgag 474
|| |||||||| || |||||||| || ||||||||||| ||||| || |||||| ||||
Sbjct: 433 gaccctctctctgaaaacattgccaagcactggaaatccaatgaggcagaagctgttgaa 492
Query: 475 acagcgaaggagtggactcgcctgtatgcaagtggggcat 514
||||||||||||||||| || ||||| || ||||| ||||
Sbjct: 493 acagcgaaggagtggacccgtctgtacgccagtggtgcat 532
>gb|BJ471269.1|BJ471269 BJ471269 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal17i23 5', mRNA sequence
Length = 636
Score = 444 bits (224), Expect = e-123
Identities = 401/460 (87%)
Strand = Plus / Plus
Query: 55 atggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcagcgaa 114
||||||||||||||||||||||| ||||||||||||||||||||| | |||||||||||
Sbjct: 73 atggccaacagcaacctcccgcgacgaatcatcaaggagacgcagagactcctcagcgag 132
Query: 115 ccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgtcatg 174
||||| |||||||||||||| ||||| ||||| |||||||||||||| ||||| ||||||
Sbjct: 133 ccagctccggggattagcgcttcgccctcggaggagaacatgcggtatttcaacgtcatg 192
Query: 175 atccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctattcttg 234
|||||||| || || ||||| ||||| ||||| |||||||| ||||| || ||||| ||
Sbjct: 193 atccttgggccggcgcagtcgccctacgaagggggagtttttaagctggaactattttta 252
Query: 235 cctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttaccatccg 294
|| ||||||||||| ||||||||||| || ||||||||||| |||||||| || |||||
Sbjct: 253 cccgaggaatatccgatggctgccccaaaggttaggtttctgaccaaaatatatcatccc 312
Query: 295 aacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcccgct 354
||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||| |||
Sbjct: 313 aacattgacaagcttggtaggatatgccttgacattctcaaggataaatggagtccggct 372
Query: 355 cttcagatacgtacagttctgctcagcattcaggcacttctgagtgccccaaatccagat 414
|||||||| || |||||||| | || || |||||||| | ||||| ||||||||||||
Sbjct: 373 cttcagattcgaacagttcttttgagtatccaggcactcttaagtgcaccaaatccagat 432
Query: 415 gatcctctctcagacaacattgcgaaacactggaaatcaaatgaagctgaagcttttgag 474
|| |||||||| || |||||||| || ||||||||||| ||||| || |||||| ||||
Sbjct: 433 gaccctctctctgaaaacattgccaagcactggaaatccaatgaggcagaagctgttgaa 492
Query: 475 acagcgaaggagtggactcgcctgtatgcaagtggggcat 514
||||||||||||||||| || ||||| || ||||| ||||
Sbjct: 493 acagcgaaggagtggacccgtctgtacgccagtggtgcat 532
>gb|BJ471396.1|BJ471396 BJ471396 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal18c24 5', mRNA sequence
Length = 673
Score = 444 bits (224), Expect = e-123
Identities = 401/460 (87%)
Strand = Plus / Plus
Query: 55 atggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcagcgaa 114
||||||||||||||||||||||| ||||||||||||||||||||| | |||||||||||
Sbjct: 77 atggccaacagcaacctcccgcgacgaatcatcaaggagacgcagagactcctcagcgag 136
Query: 115 ccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgtcatg 174
||||| |||||||||||||| ||||| ||||| |||||||||||||| ||||| ||||||
Sbjct: 137 ccagctccggggattagcgcttcgccctcggaggagaacatgcggtatttcaacgtcatg 196
Query: 175 atccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctattcttg 234
|||||||| || || ||||| ||||| ||||| |||||||| ||||| || ||||| ||
Sbjct: 197 atccttgggccggcgcagtcgccctacgaagggggagtttttaagctggaactattttta 256
Query: 235 cctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttaccatccg 294
|| ||||||||||| ||||||||||| || ||||||||||| |||||||| || |||||
Sbjct: 257 cccgaggaatatccgatggctgccccaaaggttaggtttctgaccaaaatatatcatccc 316
Query: 295 aacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcccgct 354
||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||| |||
Sbjct: 317 aacattgacaagcttggtaggatatgccttgacattctcaaggataaatggagtccggct 376
Query: 355 cttcagatacgtacagttctgctcagcattcaggcacttctgagtgccccaaatccagat 414
|||||||| || |||||||| | || || |||||||| | ||||| ||||||||||||
Sbjct: 377 cttcagattcgaacagttcttttgagtatccaggcactcttaagtgcaccaaatccagat 436
Query: 415 gatcctctctcagacaacattgcgaaacactggaaatcaaatgaagctgaagcttttgag 474
|| |||||||| || |||||||| || ||||||||||| ||||| || |||||| ||||
Sbjct: 437 gaccctctctctgaaaacattgccaagcactggaaatccaatgaggcagaagctgttgaa 496
Query: 475 acagcgaaggagtggactcgcctgtatgcaagtggggcat 514
||||||||||||||||| || ||||| || ||||| ||||
Sbjct: 497 acagcgaaggagtggacccgtctgtacgccagtggtgcat 536
>gb|BU988115.1|BU988115 HF16L08r HF Hordeum vulgare subsp. vulgare cDNA clone HF16L08
5-PRIME, mRNA sequence
Length = 623
Score = 444 bits (224), Expect = e-123
Identities = 401/460 (87%)
Strand = Plus / Plus
Query: 55 atggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcagcgaa 114
||||||||||||||||||||||| ||||||||||||||||||||| | |||||||||||
Sbjct: 107 atggccaacagcaacctcccgcgacgaatcatcaaggagacgcagagactcctcagcgag 166
Query: 115 ccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgtcatg 174
||||| |||||||||||||| ||||| ||||| |||||||||||||| ||||| ||||||
Sbjct: 167 ccagctccggggattagcgcttcgccctcggaggagaacatgcggtatttcaacgtcatg 226
Query: 175 atccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctattcttg 234
|||||||| || || ||||| ||||| ||||| |||||||| ||||| || ||||| ||
Sbjct: 227 atccttgggccggcgcagtcgccctacgaagggggagtttttaagctggaactattttta 286
Query: 235 cctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttaccatccg 294
|| ||||||||||| ||||||||||| || ||||||||||| |||||||| || |||||
Sbjct: 287 cccgaggaatatccgatggctgccccaaaggttaggtttctgaccaaaatatatcatccc 346
Query: 295 aacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcccgct 354
||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||| |||
Sbjct: 347 aacattgacaagcttggtaggatatgccttgacattctcaaggataaatggagtccggct 406
Query: 355 cttcagatacgtacagttctgctcagcattcaggcacttctgagtgccccaaatccagat 414
|||||||| || |||||||| | || || |||||||| | ||||| ||||||||||||
Sbjct: 407 cttcagattcgaacagttcttttgagtatccaggcactcttaagtgcaccaaatccagat 466
Query: 415 gatcctctctcagacaacattgcgaaacactggaaatcaaatgaagctgaagcttttgag 474
|| |||||||| || |||||||| || ||||||||||| ||||| || |||||| ||||
Sbjct: 467 gaccctctctctgaaaacattgccaagcactggaaatccaatgaggcagaagctgttgaa 526
Query: 475 acagcgaaggagtggactcgcctgtatgcaagtggggcat 514
||||||||||||||||| || ||||| || ||||| ||||
Sbjct: 527 acagcgaaggagtggacccgtctgtacgccagtggtgcat 566
>gb|CA028173.1|CA028173 HZ61D09r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ61D09
5-PRIME, mRNA sequence
Length = 650
Score = 444 bits (224), Expect = e-123
Identities = 401/460 (87%)
Strand = Plus / Plus
Query: 55 atggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcagcgaa 114
||||||||||||||||||||||| ||||||||||||||||||||| | |||||||||||
Sbjct: 120 atggccaacagcaacctcccgcgacgaatcatcaaggagacgcagagactcctcagcgag 179
Query: 115 ccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgtcatg 174
||||| |||||||||||||| ||||| ||||| |||||||||||||| ||||| ||||||
Sbjct: 180 ccagctccggggattagcgcttcgccctcggaggagaacatgcggtatttcaacgtcatg 239
Query: 175 atccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctattcttg 234
|||||||| || || ||||| ||||| ||||| |||||||| ||||| || ||||| ||
Sbjct: 240 atccttgggccggcgcagtcgccctacgaagggggagtttttaagctggaactattttta 299
Query: 235 cctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttaccatccg 294
|| ||||||||||| ||||||||||| || ||||||||||| |||||||| || |||||
Sbjct: 300 cccgaggaatatccgatggctgccccaaaggttaggtttctgaccaaaatatatcatccc 359
Query: 295 aacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcccgct 354
||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||| |||
Sbjct: 360 aacattgacaagcttggtaggatatgccttgacattctcaaggataaatggagtccggct 419
Query: 355 cttcagatacgtacagttctgctcagcattcaggcacttctgagtgccccaaatccagat 414
|||||||| || |||||||| | || || |||||||| | ||||| ||||||||||||
Sbjct: 420 cttcagattcgaacagttcttttgagtatccaggcactcttaagtgcaccaaatccagat 479
Query: 415 gatcctctctcagacaacattgcgaaacactggaaatcaaatgaagctgaagcttttgag 474
|| |||||||| || |||||||| || ||||||||||| ||||| || |||||| ||||
Sbjct: 480 gaccctctctctgaaaacattgccaagcactggaaatccaatgaggcagaagctgttgaa 539
Query: 475 acagcgaaggagtggactcgcctgtatgcaagtggggcat 514
||||||||||||||||| || ||||| || ||||| ||||
Sbjct: 540 acagcgaaggagtggacccgtctgtacgccagtggtgcat 579
>gb|CV054850.1|CV054850 BNEL114a3 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL114a3 5' similar to
ubiquitin-conjugating enzyme, putative, mRNA sequence
Length = 712
Score = 444 bits (224), Expect = e-123
Identities = 401/460 (87%)
Strand = Plus / Plus
Query: 55 atggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcagcgaa 114
||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct: 81 atggccaacagcaacctcccgcgacgaatcatcaaggagacgcagaggctcctcagcgag 140
Query: 115 ccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgtcatg 174
||||| |||||||||||||| ||||| ||||| |||||||||||||| ||||| ||||||
Sbjct: 141 ccagctccggggattagcgcttcgccctcggaggagaacatgcggtatttcaacgtcatg 200
Query: 175 atccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctattcttg 234
|||||||| || || ||||| ||||| ||||| || ||||| ||||| || ||||| ||
Sbjct: 201 atccttgggccggcgcagtcgccctacgaagggggggtttttaagctggaactattttta 260
Query: 235 cctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttaccatccg 294
|| ||||||||||| ||||||||||| || ||||||||||| |||||||| || |||||
Sbjct: 261 cccgaggaatatccgatggctgccccaaaggttaggtttctgaccaaaatatatcatccc 320
Query: 295 aacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcccgct 354
||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||| |||
Sbjct: 321 aacattgacaagcttggtaggatatgccttgacattctcaaggataaatggagtccggct 380
Query: 355 cttcagatacgtacagttctgctcagcattcaggcacttctgagtgccccaaatccagat 414
|||||||| || |||||||| | || || |||||||| | ||||| ||||||||||||
Sbjct: 381 cttcagattcgaacagttcttttgagtatccaggcactcttaagtgcaccaaatccagat 440
Query: 415 gatcctctctcagacaacattgcgaaacactggaaatcaaatgaagctgaagcttttgag 474
|| |||||||| || |||||||| || ||||||||||| ||||| || |||||| ||||
Sbjct: 441 gaccctctctctgaaaacattgccaagcactggaaatccaatgaggcagaagctgttgaa 500
Query: 475 acagcgaaggagtggactcgcctgtatgcaagtggggcat 514
||||||||||||||||| || ||||| || ||||| ||||
Sbjct: 501 acagcgaaggagtggacccgtctgtacgccagtggtgcat 540
>gb|CV057066.1|CV057066 BNEL23f5 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL23f5 5' similar to
ubiquitin-conjugating enzyme, putative, mRNA sequence
Length = 613
Score = 444 bits (224), Expect = e-123
Identities = 401/460 (87%)
Strand = Plus / Plus
Query: 55 atggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcagcgaa 114
||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct: 74 atggccaacagcaacctcccgcgacgaatcatcaaggagacgcagaggctcctcagcgag 133
Query: 115 ccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgtcatg 174
||||| |||||||||||||| ||||| ||||| |||||||||||||| ||||| ||||||
Sbjct: 134 ccagctccggggattagcgcttcgccctcggaggagaacatgcggtatttcaacgtcatg 193
Query: 175 atccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctattcttg 234
|||||||| || || ||||| ||||| ||||| || ||||| ||||| || ||||| ||
Sbjct: 194 atccttgggccggcgcagtcgccctacgaagggggggtttttaagctggaactattttta 253
Query: 235 cctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttaccatccg 294
|| ||||||||||| ||||||||||| || ||||||||||| |||||||| || |||||
Sbjct: 254 cccgaggaatatccgatggctgccccaaaggttaggtttctgaccaaaatatatcatccc 313
Query: 295 aacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcccgct 354
||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||| |||
Sbjct: 314 aacattgacaagcttggtaggatatgccttgacattctcaaggataaatggagtccggct 373
Query: 355 cttcagatacgtacagttctgctcagcattcaggcacttctgagtgccccaaatccagat 414
|||||||| || |||||||| | || || |||||||| | ||||| ||||||||||||
Sbjct: 374 cttcagattcgaacagttcttttgagtatccaggcactcttaagtgcaccaaatccagat 433
Query: 415 gatcctctctcagacaacattgcgaaacactggaaatcaaatgaagctgaagcttttgag 474
|| |||||||| || |||||||| || ||||||||||| ||||| || |||||| ||||
Sbjct: 434 gaccctctctctgaaaacattgccaagcactggaaatccaatgaggcagaagctgttgaa 493
Query: 475 acagcgaaggagtggactcgcctgtatgcaagtggggcat 514
||||||||||||||||| || ||||| || ||||| ||||
Sbjct: 494 acagcgaaggagtggacccgtctgtacgccagtggtgcat 533
>gb|CV058991.1|CV058991 BNEL43b9 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL43b9 5' similar to
ubiquitin-conjugating enzyme, putative, mRNA sequence
Length = 604
Score = 444 bits (224), Expect = e-123
Identities = 401/460 (87%)
Strand = Plus / Plus
Query: 55 atggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcagcgaa 114
||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct: 81 atggccaacagcaacctcccgcgacgaatcatcaaggagacgcagaggctcctcagcgag 140
Query: 115 ccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgtcatg 174
||||| |||||||||||||| ||||| ||||| |||||||||||||| ||||| ||||||
Sbjct: 141 ccagctccggggattagcgcttcgccctcggaggagaacatgcggtatttcaacgtcatg 200
Query: 175 atccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctattcttg 234
|||||||| || || ||||| ||||| ||||| || ||||| ||||| || ||||| ||
Sbjct: 201 atccttgggccggcgcagtcgccctacgaagggggggtttttaagctggaactattttta 260
Query: 235 cctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttaccatccg 294
|| ||||||||||| ||||||||||| || ||||||||||| |||||||| || |||||
Sbjct: 261 cccgaggaatatccgatggctgccccaaaggttaggtttctgaccaaaatatatcatccc 320
Query: 295 aacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcccgct 354
||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||| |||
Sbjct: 321 aacattgacaagcttggtaggatatgccttgacattctcaaggataaatggagtccggct 380
Query: 355 cttcagatacgtacagttctgctcagcattcaggcacttctgagtgccccaaatccagat 414
|||||||| || |||||||| | || || |||||||| | ||||| ||||||||||||
Sbjct: 381 cttcagattcgaacagttcttttgagtatccaggcactcttaagtgcaccaaatccagat 440
Query: 415 gatcctctctcagacaacattgcgaaacactggaaatcaaatgaagctgaagcttttgag 474
|| |||||||| || |||||||| || ||||||||||| ||||| || |||||| ||||
Sbjct: 441 gaccctctctctgaaaacattgccaagcactggaaatccaatgaggcagaagctgttgaa 500
Query: 475 acagcgaaggagtggactcgcctgtatgcaagtggggcat 514
||||||||||||||||| || ||||| || ||||| ||||
Sbjct: 501 acagcgaaggagtggacccgtctgtacgccagtggtgcat 540
>gb|CV062985.1|CV062985 BNEL85c9 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL85c9 5' similar to
ubiquitin-conjugating enzyme, putative, mRNA sequence
Length = 715
Score = 444 bits (224), Expect = e-123
Identities = 401/460 (87%)
Strand = Plus / Plus
Query: 55 atggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcagcgaa 114
||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct: 81 atggccaacagcaacctcccgcgacgaatcatcaaggagacgcagaggctcctcagcgag 140
Query: 115 ccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgtcatg 174
||||| |||||||||||||| ||||| ||||| |||||||||||||| ||||| ||||||
Sbjct: 141 ccagctccggggattagcgcttcgccctcggaggagaacatgcggtatttcaacgtcatg 200
Query: 175 atccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctattcttg 234
|||||||| || || ||||| ||||| ||||| || ||||| ||||| || ||||| ||
Sbjct: 201 atccttgggccggcgcagtcgccctacgaagggggggtttttaagctggaactattttta 260
Query: 235 cctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttaccatccg 294
|| ||||||||||| ||||||||||| || ||||||||||| |||||||| || |||||
Sbjct: 261 cccgaggaatatccgatggctgccccaaaggttaggtttctgaccaaaatatatcatccc 320
Query: 295 aacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcccgct 354
||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||| |||
Sbjct: 321 aacattgacaagcttggtaggatatgccttgacattctcaaggataaatggagtccggct 380
Query: 355 cttcagatacgtacagttctgctcagcattcaggcacttctgagtgccccaaatccagat 414
|||||||| || |||||||| | || || |||||||| | ||||| ||||||||||||
Sbjct: 381 cttcagattcgaacagttcttttgagtatccaggcactcttaagtgcaccaaatccagat 440
Query: 415 gatcctctctcagacaacattgcgaaacactggaaatcaaatgaagctgaagcttttgag 474
|| |||||||| || |||||||| || ||||||||||| ||||| || |||||| ||||
Sbjct: 441 gaccctctctctgaaaacattgccaagcactggaaatccaatgaggcagaagctgttgaa 500
Query: 475 acagcgaaggagtggactcgcctgtatgcaagtggggcat 514
||||||||||||||||| || ||||| || ||||| ||||
Sbjct: 501 acagcgaaggagtggacccgtctgtacgccagtggtgcat 540
>gb|CV063901.1|CV063901 BNEL94d7 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL94d7 5' similar to
ubiquitin-conjugating enzyme, putative, mRNA sequence
Length = 658
Score = 444 bits (224), Expect = e-123
Identities = 401/460 (87%)
Strand = Plus / Plus
Query: 55 atggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcagcgaa 114
||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct: 81 atggccaacagcaacctcccgcgacgaatcatcaaggagacgcagaggctcctcagcgag 140
Query: 115 ccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgtcatg 174
||||| |||||||||||||| ||||| ||||| |||||||||||||| ||||| ||||||
Sbjct: 141 ccagctccggggattagcgcttcgccctcggaggagaacatgcggtatttcaacgtcatg 200
Query: 175 atccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctattcttg 234
|||||||| || || ||||| ||||| ||||| || ||||| ||||| || ||||| ||
Sbjct: 201 atccttgggccggcgcagtcgccctacgaagggggggtttttaagctggaactattttta 260
Query: 235 cctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttaccatccg 294
|| ||||||||||| ||||||||||| || ||||||||||| |||||||| || |||||
Sbjct: 261 cccgaggaatatccgatggctgccccaaaggttaggtttctgaccaaaatatatcatccc 320
Query: 295 aacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcccgct 354
||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||| |||
Sbjct: 321 aacattgacaagcttggtaggatatgccttgacattctcaaggataaatggagtccggct 380
Query: 355 cttcagatacgtacagttctgctcagcattcaggcacttctgagtgccccaaatccagat 414
|||||||| || |||||||| | || || |||||||| | ||||| ||||||||||||
Sbjct: 381 cttcagattcgaacagttcttttgagtatccaggcactcttaagtgcaccaaatccagat 440
Query: 415 gatcctctctcagacaacattgcgaaacactggaaatcaaatgaagctgaagcttttgag 474
|| |||||||| || |||||||| || ||||||||||| ||||| || |||||| ||||
Sbjct: 441 gaccctctctctgaaaacattgccaagcactggaaatccaatgaggcagaagctgttgaa 500
Query: 475 acagcgaaggagtggactcgcctgtatgcaagtggggcat 514
||||||||||||||||| || ||||| || ||||| ||||
Sbjct: 501 acagcgaaggagtggacccgtctgtacgccagtggtgcat 540
>gb|CV055377.1|CV055377 BNEL119h7 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL119h7 5' similar to
ubiquitin-conjugating enzyme, putative, mRNA sequence
Length = 683
Score = 440 bits (222), Expect = e-122
Identities = 390/446 (87%)
Strand = Plus / Plus
Query: 55 atggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcagcgaa 114
||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct: 74 atggccaacagcaacctcccgcgacgaatcatcaaggagacgcagaggctcctcagcgag 133
Query: 115 ccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgtcatg 174
||||| |||||||||||||| ||||| ||||| |||||||||||||| ||||| ||||||
Sbjct: 134 ccagctccggggattagcgcttcgccctcggaggagaacatgcggtatttcaacgtcatg 193
Query: 175 atccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctattcttg 234
|||||||| || || ||||| ||||| ||||| || ||||| ||||| || ||||| ||
Sbjct: 194 atccttgggccggcgcagtcgccctacgaagggggggtttttaagctggaactattttta 253
Query: 235 cctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttaccatccg 294
|| ||||||||||| ||||||||||| || ||||||||||| |||||||| || |||||
Sbjct: 254 cccgaggaatatccgatggctgccccaaaggttaggtttctgaccaaaatatatcatccc 313
Query: 295 aacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcccgct 354
||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||| |||
Sbjct: 314 aacattgacaagcttggtaggatatgccttgacattctcaaggataaatggagtccggct 373
Query: 355 cttcagatacgtacagttctgctcagcattcaggcacttctgagtgccccaaatccagat 414
|||||||| || |||||||| | || || |||||||| | ||||| ||||||||||||
Sbjct: 374 cttcagattcgaacagttcttttgagtatccaggcactcttaagtgcaccaaatccagat 433
Query: 415 gatcctctctcagacaacattgcgaaacactggaaatcaaatgaagctgaagcttttgag 474
|| |||||||| || |||||||| || ||||||||||| ||||| || |||||| ||||
Sbjct: 434 gaccctctctctgaaaacattgccaagcactggaaatccaatgaggcagaagctgttgaa 493
Query: 475 acagcgaaggagtggactcgcctgta 500
||||||||||||||||| || |||||
Sbjct: 494 acagcgaaggagtggacccgtctgta 519
>gb|CV057906.1|CV057906 BNEL32b7 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL32b7 5' similar to
ubiquitin-conjugating enzyme, putative, mRNA sequence
Length = 588
Score = 440 bits (222), Expect = e-122
Identities = 390/446 (87%)
Strand = Plus / Plus
Query: 55 atggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcagcgaa 114
||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct: 73 atggccaacagcaacctcccgcgacgaatcatcaaggagacgcagaggctcctcagcgag 132
Query: 115 ccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgtcatg 174
||||| |||||||||||||| ||||| ||||| |||||||||||||| ||||| ||||||
Sbjct: 133 ccagctccggggattagcgcttcgccctcggaggagaacatgcggtatttcaacgtcatg 192
Query: 175 atccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctattcttg 234
|||||||| || || ||||| ||||| ||||| || ||||| ||||| || ||||| ||
Sbjct: 193 atccttgggccggcgcagtcgccctacgaagggggggtttttaagctggaactattttta 252
Query: 235 cctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttaccatccg 294
|| ||||||||||| ||||||||||| || ||||||||||| |||||||| || |||||
Sbjct: 253 cccgaggaatatccgatggctgccccaaaggttaggtttctgaccaaaatatatcatccc 312
Query: 295 aacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcccgct 354
||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||| |||
Sbjct: 313 aacattgacaagcttggtaggatatgccttgacattctcaaggataaatggagtccggct 372
Query: 355 cttcagatacgtacagttctgctcagcattcaggcacttctgagtgccccaaatccagat 414
|||||||| || |||||||| | || || |||||||| | ||||| ||||||||||||
Sbjct: 373 cttcagattcgaacagttcttttgagtatccaggcactcttaagtgcaccaaatccagat 432
Query: 415 gatcctctctcagacaacattgcgaaacactggaaatcaaatgaagctgaagcttttgag 474
|| |||||||| || |||||||| || ||||||||||| ||||| || |||||| ||||
Sbjct: 433 gaccctctctctgaaaacattgccaagcactggaaatccaatgaggcagaagctgttgaa 492
Query: 475 acagcgaaggagtggactcgcctgta 500
||||||||||||||||| || |||||
Sbjct: 493 acagcgaaggagtggacccgtctgta 518
>gb|BU973650.1|BU973650 HB25J10r BC Hordeum vulgare subsp. vulgare cDNA clone HB25J10
5-PRIME, mRNA sequence
Length = 539
Score = 438 bits (221), Expect = e-121
Identities = 383/437 (87%)
Strand = Plus / Plus
Query: 55 atggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcagcgaa 114
||||||||||||||||||||||| ||||||||||||||||||||| | |||||||||||
Sbjct: 97 atggccaacagcaacctcccgcgacgaatcatcaaggagacgcagagactcctcagcgag 156
Query: 115 ccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgtcatg 174
||||| |||||||||||||| ||||| ||||| |||||||||||||| ||||| ||||||
Sbjct: 157 ccagctccggggattagcgcttcgccctcggaggagaacatgcggtatttcaacgtcatg 216
Query: 175 atccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctattcttg 234
|||||||| || || ||||| ||||| ||||| |||||||| ||||| || ||||| ||
Sbjct: 217 atccttgggccggcgcagtcgccctacgaagggggagtttttaagctggaactattttta 276
Query: 235 cctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttaccatccg 294
|| ||||||||||| ||||||||||| || ||||||||||| |||||||| || |||||
Sbjct: 277 cccgaggaatatccgatggctgccccaaaggttaggtttctgaccaaaatatatcatccc 336
Query: 295 aacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcccgct 354
||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||| |||
Sbjct: 337 aacattgacaagcttggtaggatatgccttgacattctcaaggataaatggagtccggct 396
Query: 355 cttcagatacgtacagttctgctcagcattcaggcacttctgagtgccccaaatccagat 414
|||||||| || |||||||| | || || |||||||| | ||||| ||||||||||||
Sbjct: 397 cttcagattcgaacagttcttttgagtatccaggcactcttaagtgcaccaaatccagat 456
Query: 415 gatcctctctcagacaacattgcgaaacactggaaatcaaatgaagctgaagcttttgag 474
|| |||||||| || |||||||| || ||||||||||| ||||| || |||||| ||||
Sbjct: 457 gaccctctctctgaaaacattgccaagcactggaaatccaatgaggcagaagctgttgaa 516
Query: 475 acagcgaaggagtggac 491
|||||||||||||||||
Sbjct: 517 acagcgaaggagtggac 533
>gb|CV059929.1|CV059929 BNEL52e12 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL52e12 5' similar to
ubiquitin-conjugating enzyme, putative, mRNA sequence
Length = 633
Score = 438 bits (221), Expect = e-121
Identities = 400/460 (86%)
Strand = Plus / Plus
Query: 55 atggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcagcgaa 114
||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct: 74 atggccaacagcaacctcccgcgacgaatcatcaaggagacgcagaggctcctcagcgag 133
Query: 115 ccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgtcatg 174
||||| |||||||||||||| ||||| ||||| |||||||||||||| ||||| ||||||
Sbjct: 134 ccagctccggggattagcgcttcgccctcggaggagaacatgcggtatttcaacgtcatg 193
Query: 175 atccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctattcttg 234
|||||||| || || ||||| ||||| ||||| || ||||| ||||| || ||||| ||
Sbjct: 194 atccttgggccggcgcagtcgccctacgaagggggggtttttaagctggaactattttta 253
Query: 235 cctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttaccatccg 294
|| ||||||||||| ||||||||||| || ||||||||||| |||||||| || |||||
Sbjct: 254 cccgaggaatatccgatggctgccccaaaggttaggtttctgaccaaaatatatcatccc 313
Query: 295 aacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcccgct 354
||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||| |||
Sbjct: 314 aacattgacaagcttggtaggatatgccttgacattctcaaggataaatggagtccggct 373
Query: 355 cttcagatacgtacagttctgctcagcattcaggcacttctgagtgccccaaatccagat 414
|||||||| || |||||||| || || |||||||| | ||||| ||||||||||||
Sbjct: 374 cttcagattcgaacagttctttngagtatccaggcactcttaagtgcaccaaatccagat 433
Query: 415 gatcctctctcagacaacattgcgaaacactggaaatcaaatgaagctgaagcttttgag 474
|| |||||||| || |||||||| || ||||||||||| ||||| || |||||| ||||
Sbjct: 434 gaccctctctctgaaaacattgccaagcactggaaatccaatgaggcagaagctgttgaa 493
Query: 475 acagcgaaggagtggactcgcctgtatgcaagtggggcat 514
||||||||||||||||| || ||||| || ||||| ||||
Sbjct: 494 acagcgaaggagtggacccgtctgtacgccagtggtgcat 533
>gb|CV064310.1|CV064310 BNEL9E12 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL9E12 5' similar to
ubiquitin-conjugating enzyme, putative, mRNA sequence
Length = 608
Score = 436 bits (220), Expect = e-121
Identities = 400/460 (86%)
Strand = Plus / Plus
Query: 55 atggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcagcgaa 114
||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct: 73 atggccaacagcaacctcccgcgacgaatcatcaaggagacgcagaggctcctcagcgag 132
Query: 115 ccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgtcatg 174
||||| |||||||||||||| ||||| ||||| |||||||||||||| ||||| ||||||
Sbjct: 133 ccagctccggggattagcgcttcgccctcggaggagaacatgcggtatttcaacgtcatg 192
Query: 175 atccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctattcttg 234
|||||||| || || ||||| ||||| ||||| || ||||| ||||| || ||||| ||
Sbjct: 193 atccttgggccggcgcagtcgccctacgaagggggggtttttaagctggaactattttta 252
Query: 235 cctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttaccatccg 294
|| ||||||||||| ||||||||||| || ||||||||||| |||||||| || |||||
Sbjct: 253 cccgaggaatatccgatggctgccccaaaggttaggtttctgaccaaaatatatcatccc 312
Query: 295 aacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcccgct 354
||||||||||||||||||||||||||||| |||||||| || || ||||||||||| |||
Sbjct: 313 aacattgacaagcttggtaggatatgccttgacattctcaaagataaatggagtccggct 372
Query: 355 cttcagatacgtacagttctgctcagcattcaggcacttctgagtgccccaaatccagat 414
|||||||| || |||||||| | || || |||||||| | ||||| ||||||||||||
Sbjct: 373 cttcagattcgaacagttcttttgagtatccaggcactcttaagtgcaccaaatccagat 432
Query: 415 gatcctctctcagacaacattgcgaaacactggaaatcaaatgaagctgaagcttttgag 474
|| |||||||| || |||||||| || ||||||||||| ||||| || |||||| ||||
Sbjct: 433 gaccctctctctgaaaacattgccaagcactggaaatccaatgaggcagaagctgttgaa 492
Query: 475 acagcgaaggagtggactcgcctgtatgcaagtggggcat 514
||||||||||||||||| || ||||| || ||||| ||||
Sbjct: 493 acagcgaaggagtggacccgtctgtacgccagtggtgcat 532
>gb|AL508760.1|AL508760 AL508760 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY09L15V 5',
mRNA sequence
Length = 700
Score = 432 bits (218), Expect = e-120
Identities = 399/460 (86%)
Strand = Plus / Plus
Query: 55 atggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcagcgaa 114
||||||||||||||||||||||| ||||||||||||||||||||| | |||||||||||
Sbjct: 62 atggccaacagcaacctcccgcgacgaatcatcaaggagacgcagagactcctcagcgag 121
Query: 115 ccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgtcatg 174
||||| |||||||||||||| ||||| ||||| |||||||||||| | ||||| ||||||
Sbjct: 122 ccagctccggggattagcgcttcgccctcggaggagaacatgcggnatttcaacgtcatg 181
Query: 175 atccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctattcttg 234
|||||||| || || ||| | ||||| ||||| |||||||| ||||| || ||||| ||
Sbjct: 182 atccttgggccggcgcagncgccctacgaagggggagtttttaagctggaactattttta 241
Query: 235 cctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttaccatccg 294
|| ||||||||||| ||||||||||| || ||||||||||| |||||||| || |||||
Sbjct: 242 cccgaggaatatccgatggctgccccaaaggttaggtttctgaccaaaatatatcatccc 301
Query: 295 aacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcccgct 354
||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||| |||
Sbjct: 302 aacattgacaagcttggtaggatatgccttgacattctcaaggataaatggagtccggct 361
Query: 355 cttcagatacgtacagttctgctcagcattcaggcacttctgagtgccccaaatccagat 414
|||||||| || |||||||| | || || |||||||| | ||||| ||||||||||||
Sbjct: 362 cttcagattcgaacagttcttttgagtatccaggcactcttaagtgcaccaaatccagat 421
Query: 415 gatcctctctcagacaacattgcgaaacactggaaatcaaatgaagctgaagcttttgag 474
|| |||||||| || |||||||| || ||||||||||| ||||| || |||||| ||||
Sbjct: 422 gaccctctctctgaaaacattgccaagcactggaaatccaatgaggcagaagctgttgaa 481
Query: 475 acagcgaaggagtggactcgcctgtatgcaagtggggcat 514
||||||||||||||||| || ||||| || ||||| ||||
Sbjct: 482 acagcgaaggagtggacccgtctgtacgccagtggtgcat 521
>gb|CV054411.1|CV054411 BNEL10C11 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL10C11 5' similar to
ubiquitin-conjugating enzyme, putative, mRNA sequence
Length = 518
Score = 432 bits (218), Expect = e-120
Identities = 382/437 (87%)
Strand = Plus / Plus
Query: 55 atggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcagcgaa 114
||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct: 74 atggccaacagcaacctcccgcgacgaatcatcaaggagacgcagaggctcctcagcgag 133
Query: 115 ccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgtcatg 174
||||| |||||||||||||| ||||| ||||| |||||||||||||| ||||| ||||||
Sbjct: 134 ccagctccggggattagcgcttcgccctcggaggagaacatgcggtatttcaacgtcatg 193
Query: 175 atccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctattcttg 234
|||||||| || || ||||| ||||| ||||| || ||||| ||||| || ||||| ||
Sbjct: 194 atccttgggccggcgcagtcgccctacgaagggggggtttttaagctggaactattttta 253
Query: 235 cctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttaccatccg 294
|| ||||||||||| ||||||||||| || ||||||||||| |||||||| || |||||
Sbjct: 254 cccgaggaatatccgatggctgccccaaaggttaggtttctgaccaaaatatatcatccc 313
Query: 295 aacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcccgct 354
||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||| |||
Sbjct: 314 aacattgacaagcttggtaggatatgccttgacattctcaaggataaatggagtccggct 373
Query: 355 cttcagatacgtacagttctgctcagcattcaggcacttctgagtgccccaaatccagat 414
|||||||| || |||||||| | || || |||||||| | ||||| ||||||||||||
Sbjct: 374 cttcagattcgaacagttcttttgagtatccaggcactcttaagtgcaccaaatccagat 433
Query: 415 gatcctctctcagacaacattgcgaaacactggaaatcaaatgaagctgaagcttttgag 474
|| |||||||| || ||||| || || ||||||||||| ||||| || |||||| ||||
Sbjct: 434 gaccctctctctgaaaacatngccaagcactggaaatccaatgaggcagaagctgttgaa 493
Query: 475 acagcgaaggagtggac 491
|||||||||||||||||
Sbjct: 494 acagcgaaggagtggac 510
>gb|AV915127.1|AV915127 AV915127 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags9p23 5', mRNA sequence
Length = 582
Score = 430 bits (217), Expect = e-119
Identities = 401/461 (86%), Gaps = 1/461 (0%)
Strand = Plus / Plus
Query: 55 atggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcagcgaa 114
||||||||||||||||||||||| ||||||||||||||||||||| | |||||||||||
Sbjct: 74 atggccaacagcaacctcccgcgacgaatcatcaaggagacgcagagactcctcagcgag 133
Query: 115 ccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgtcatg 174
||||| |||||||||||||| ||||| ||||| |||||||||||||| ||||| ||||||
Sbjct: 134 ccagctccggggattagcgcttcgccctcggaggagaacatgcggtatttcaacgtcatg 193
Query: 175 atccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctattcttg 234
|||||||| || || ||||| ||||| ||||| |||||||| ||||| || ||||| ||
Sbjct: 194 atccttgggccggcgcagtcgccctacgaagggggagtttttaagctggaactattttta 253
Query: 235 cctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttaccatccg 294
|| ||||||||||| ||||||||||| || ||||||||||| |||||||| || |||||
Sbjct: 254 cccgaggaatatccgatggctgccccaaaggttaggtttctgaccaaaatatatcatccc 313
Query: 295 aacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcccgct 354
||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||| |||
Sbjct: 314 aacattgacaagcttggtaggatatgccttgacattctcaaggataaatggagtccggct 373
Query: 355 cttcagatacgtacagttctgctcagcattcaggcacttctgagtgccccaaatccagat 414
|||||||| || |||||||| | || || |||||||| | ||||| ||||||||||||
Sbjct: 374 cttcagattcgaacagttcttttgagtatccaggcactcttaagtgcaccaaatccagat 433
Query: 415 gatcctctctcagacaacattgcgaaacactggaaatcaaatgaagctgaagcttttgag 474
|| |||||||| || |||||||| || ||||||||||| ||||| || |||||| ||||
Sbjct: 434 gaccctctctctgaaaacattgccaagcactggaaatccaatgaggcagaagctgttgaa 493
Query: 475 acagcg-aaggagtggactcgcctgtatgcaagtggggcat 514
|||||| ||||||||||| || ||||| || ||||| ||||
Sbjct: 494 acagcgaaaggagtggacccgtctgtacgccagtggtgcat 534
>gb|BE454423.1|BE454423 HVSMEh0094G14f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0094G14f, mRNA sequence
Length = 989
Score = 428 bits (216), Expect = e-118
Identities = 399/460 (86%)
Strand = Plus / Plus
Query: 55 atggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcagcgaa 114
||||||||||||||||||||||| ||||||||||||||||||||| | |||||||||||
Sbjct: 65 atggccaacagcaacctcccgcgacgaatcatcaaggagacgcagagactcctcagcgag 124
Query: 115 ccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgtcatg 174
||||| |||||||||||||| ||||| ||||| |||||||||||||| ||||| ||||||
Sbjct: 125 ccagctccggggattagcgcttcgccctcggaggagaacatgcggtatttcaacgtcatg 184
Query: 175 atccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctattcttg 234
|||||||| || || ||||| ||||| ||||| |||||||| ||||| || ||||| ||
Sbjct: 185 atccttgggccggcgcagtcgccctacgaagggggagtttttaagctggaactattttta 244
Query: 235 cctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttaccatccg 294
|| ||||||||||| ||||||||||| || ||||||||||| |||||||| || |||||
Sbjct: 245 cccgaggaatatccgatggctgccccaaaggttaggtttctgaccaaaatatatcatccc 304
Query: 295 aacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcccgct 354
||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||| |||
Sbjct: 305 aacattgacaagcttggtaggatatgccttgacattctcaaggataaatggagtccggct 364
Query: 355 cttcagatacgtacagttctgctcagcattcaggcacttctgagtgccccaaatccagat 414
|||||||| || |||||||| | || || |||||||| | ||||| ||||||||||||
Sbjct: 365 cttcagattcgaacagttcttttgagtatccaggcactcttaagtgcaccaaatccagat 424
Query: 415 gatcctctctcagacaacattgcgaaacactggaaatcaaatgaagctgaagcttttgag 474
|| |||||||| || |||||||| || ||||||||||| ||||| || ||||| ||||
Sbjct: 425 gaccctctctctgaaaacattgccaagcactggaaatccaatgaggcaaaagctgttgaa 484
Query: 475 acagcgaaggagtggactcgcctgtatgcaagtggggcat 514
||| ||||||||||||| || ||||| || ||||| ||||
Sbjct: 485 acaacgaaggagtggacccgtctgtacgccagtggtgcat 524
>gb|BU971214.1|BU971214 HB16P06r BC Hordeum vulgare subsp. vulgare cDNA clone HB16P06
5-PRIME, mRNA sequence
Length = 412
Score = 428 bits (216), Expect = e-118
Identities = 333/372 (89%)
Strand = Plus / Plus
Query: 57 ggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcagcgaacc 116
|||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||
Sbjct: 34 ggccaacagcaacctcccgcgccggatcatcaaggagacgcagcggctgctcagcgagcc 93
Query: 117 agcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgtcatgat 176
|||||||||||| ||||| |||||||| || ||||||||||| ||||||||||||||| |
Sbjct: 94 agcgccggggatcagcgcctcgccgtccgaggagaacatgcgctacttcaatgtcatggt 153
Query: 177 ccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctattcttgcc 236
|||||||||||| ||||| ||||| ||||||||||| ||||||||||| || ||||| ||
Sbjct: 154 ccttggccccgcgcagtcgccctacgaaggtggagtcttcaagcttgaacttttcttacc 213
Query: 237 tgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttaccatccgaa 296
||||||||||| |||||||| || |||||||||||||| || ||||| ||||| || ||
Sbjct: 214 cgaggaatatccgatggctgctcctaaagttaggtttctgacaaaaatataccaccccaa 273
Query: 297 cattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcccgctct 356
|||||||||||||||||| |||||||||||||| || |||||||| |||||||| |||||
Sbjct: 274 cattgacaagcttggtagaatatgcctcgacatcctgaaggacaagtggagtccagctct 333
Query: 357 tcagatacgtacagttctgctcagcattcaggcacttctgagtgccccaaatccagatga 416
||||||||| || ||||| | |||||||||||||| ||||| || ||||| ||||||||
Sbjct: 334 tcagatacgcactgttcttttgagcattcaggcactgctgagcgctccaaacccagatga 393
Query: 417 tcctctctcaga 428
||||||||||||
Sbjct: 394 tcctctctcaga 405
>gb|BE420881.1|BE420881 HWM003.E06 ITEC HWM Barley Leaf Library Hordeum vulgare subsp.
vulgare cDNA clone HWM003.E06, mRNA sequence
Length = 935
Score = 420 bits (212), Expect = e-116
Identities = 377/432 (87%)
Strand = Plus / Plus
Query: 51 ttccatggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcag 110
|||||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||
Sbjct: 74 ttccatggccaacagcaacctcccgcgccggatcatcaaggagacgcagcggctgctgag 133
Query: 111 cgaaccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgt 170
||| |||||||||||||| ||||| |||||||| || ||||||||||| |||||||||||
Sbjct: 134 cgagccagcgccggggatcagcgcctcgccgtccgaggagaacatgcgctacttcaatgt 193
Query: 171 catgatccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctatt 230
|||| ||||||||||||| ||||| ||||| ||||||||||| ||||||||||| || ||
Sbjct: 194 catggtccttggccccgcgcagtcgccctacgaaggtggagtcttcaagcttgaactttt 253
Query: 231 cttgcctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttacca 290
||| || ||||||||||| |||||||| || |||||||||||||| || ||||| |||||
Sbjct: 254 cttacccgaggaatatccgatggctgctcctaaagttaggtttctgacaaaaatatacca 313
Query: 291 tccgaacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcc 350
|| |||||||||||||||||||| |||||||||||||| || |||||||| ||||||||
Sbjct: 314 ccccaacattgacaagcttggtagaatatgcctcgacatcctgaaggacaagtggagtcc 373
Query: 351 cgctcttcagatacgtacagttctgctcagcattcaggcacttctgagtgccccaaatcc 410
|||||||||||||| || | ||| | |||||||||||||| |||| || ||||| ||
Sbjct: 374 agctcttcagatacgcactggtcttttgagcattcaggcactggtgagcgctccaaaccc 433
Query: 411 agatgatcctctctcagacaacattgcgaaacactggaaatcaaatgaagctgaagcttt 470
|||||||||||||||||| || | |||||||| |||| ||||||||| ||||| |
Sbjct: 434 agatgatcctctctcagagaatgtctgataacactgggaatccaatgaagcttaagctgt 493
Query: 471 tgagacagcgaa 482
||||||| ||||
Sbjct: 494 tgagacaccgaa 505
>gb|BQ470907.1|BQ470907 HX04G11r HX Hordeum vulgare subsp. vulgare cDNA clone HX04G11
5-PRIME, mRNA sequence
Length = 636
Score = 414 bits (209), Expect = e-114
Identities = 401/465 (86%), Gaps = 5/465 (1%)
Strand = Plus / Plus
Query: 55 atggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcagcgaa 114
||||||||||||||||||||||| ||||||||||||||||||||| | |||||||||||
Sbjct: 40 atggccaacagcaacctcccgcgacgaatcatcaaggagacgcagagactcctcagcgag 99
Query: 115 ccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgtcatg 174
||||| |||||||||||||| ||||| ||||| |||||||||||||| ||||| ||||||
Sbjct: 100 ccagctccggggattagcgcttcgccctcggaggagaacatgcggtatttcaacgtcatg 159
Query: 175 atccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctattcttg 234
|||||||| || || ||||| ||||| ||||| |||||||| ||||| || ||||| ||
Sbjct: 160 atccttgggccggcgcagtcgccctacgaagggggagtttttaagctggaactattttta 219
Query: 235 cctgaggaatatccaatggctgccccgaaa-----gttaggtttctcaccaaaatttacc 289
|| ||||||||||| ||||||||||| || ||||||||||| |||||||| || |
Sbjct: 220 cccgaggaatatccgatggctgccccaaagcgcaggttaggtttctgaccaaaatatatc 279
Query: 290 atccgaacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtc 349
|||| ||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||
Sbjct: 280 atcccaacattgacaagcttggtaggatatgccttgacattctcaaggataaatggagtc 339
Query: 350 ccgctcttcagatacgtacagttctgctcagcattcaggcacttctgagtgccccaaatc 409
| ||||||||||| || |||||||| | || || |||||||| | ||||| |||||||
Sbjct: 340 cggctcttcagattcgaacagttcttttgagtatccaggcactcttaagtgcaccaaatc 399
Query: 410 cagatgatcctctctcagacaacattgcgaaacactggaaatcaaatgaagctgaagctt 469
||||||| |||||||| || |||||||| || ||||||||||| ||||| || ||||||
Sbjct: 400 cagatgaccctctctctgaaaacattgccaagcactggaaatccaatgaggcagaagctg 459
Query: 470 ttgagacagcgaaggagtggactcgcctgtatgcaagtggggcat 514
|||| ||||||||||||||||| || ||||| || ||||| ||||
Sbjct: 460 ttgaaacagcgaaggagtggacccgtctgtacgccagtggtgcat 504
>gb|BJ474003.1|BJ474003 BJ474003 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal18c24 3', mRNA sequence
Length = 713
Score = 408 bits (206), Expect = e-112
Identities = 383/442 (86%)
Strand = Plus / Minus
Query: 73 ccgcgccgaatcatcaaggagacgcagcggctcctcagcgaaccagcgccggggattagc 132
||||| ||||||||||||||||||||| | ||||||||||| ||||| ||||||||||||
Sbjct: 713 ccgcgacgaatcatcaaggagacgcagagactcctcagcgagccagctccggggattagc 654
Query: 133 gcgtcgccgtcggaagagaacatgcggtacttcaatgtcatgatccttggccccgcacag 192
|| ||||| ||||| |||||||||||||| ||||| |||||||||||||| || || |||
Sbjct: 653 gcttcgccctcggaggagaacatgcggtatttcaacgtcatgatccttgggccggcgcag 594
Query: 193 tcaccctatgaaggtggagttttcaagcttgagctattcttgcctgaggaatatccaatg 252
|| ||||| ||||| |||||||| ||||| || ||||| || || ||||||||||| |||
Sbjct: 593 tcgccctacgaagggggagtttttaagctggaactatttttacccgaggaatatccgatg 534
Query: 253 gctgccccgaaagttaggtttctcaccaaaatttaccatccgaacattgacaagcttggt 312
|||||||| || ||||||||||| |||||||| || ||||| ||||||||||||||||||
Sbjct: 533 gctgccccaaaggttaggtttctgaccaaaatatatcatcccaacattgacaagcttggt 474
Query: 313 aggatatgcctcgacattcttaaggacaaatggagtcccgctcttcagatacgtacagtt 372
||||||||||| |||||||| ||||| ||||||||||| ||||||||||| || ||||||
Sbjct: 473 aggatatgccttgacattctcaaggataaatggagtccggctcttcagattcgaacagtt 414
Query: 373 ctgctcagcattcaggcacttctgagtgccccaaatccagatgatcctctctcagacaac 432
|| | || || |||||||| | ||||| |||||||||||||| |||||||| || |||
Sbjct: 413 cttttgagtatccaggcactcttaagtgcaccaaatccagatgaccctctctctgaaaac 354
Query: 433 attgcgaaacactggaaatcaaatgaagctgaagcttttgagacagcgaaggagtggact 492
||||| || ||||||||||| ||||| || |||||| |||| |||||||||||||||||
Sbjct: 353 attgccaagcactggaaatccaatgaggcagaagctgttgaaacagcgaaggagtggacc 294
Query: 493 cgcctgtatgcaagtggggcat 514
|| ||||| || ||||| ||||
Sbjct: 293 cgtctgtacgccagtggtgcat 272
>gb|BU990501.1|BU990501 HF25D20r HF Hordeum vulgare subsp. vulgare cDNA clone HF25D20
5-PRIME, mRNA sequence
Length = 544
Score = 408 bits (206), Expect = e-112
Identities = 371/426 (87%)
Strand = Plus / Plus
Query: 55 atggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcagcgaa 114
||||||||||||||||||||||| ||||||||||||||||||||| | |||||||||||
Sbjct: 119 atggccaacagcaacctcccgcgacgaatcatcaaggagacgcagagactcctcagcgag 178
Query: 115 ccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgtcatg 174
||||| |||||||||||||| ||||| ||||| |||||||||||||| ||||| ||||||
Sbjct: 179 ccagctccggggattagcgcttcgccctcggaggagaacatgcggtatttcaacgtcatg 238
Query: 175 atccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctattcttg 234
|||||||| || || ||||| ||||| ||||| |||||||| ||||| || ||||| ||
Sbjct: 239 atccttgggccggcgcagtcgccctacgaagggggagtttttaagctggaactattttta 298
Query: 235 cctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttaccatccg 294
|| ||||||||||| ||||||||||| || ||||||||||| |||||||| || |||||
Sbjct: 299 cccgaggaatatccgatggctgccccaaaggttaggtttctgaccaaaatatatcatccc 358
Query: 295 aacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcccgct 354
||||||||||||||||||||||||||||| |||||||| ||||| |||||||| || |||
Sbjct: 359 aacattgacaagcttggtaggatatgccttgacattctcaaggataaatggaggccggct 418
Query: 355 cttcagatacgtacagttctgctcagcattcaggcacttctgagtgccccaaatccagat 414
|||||||| || |||||||| | || || |||||||| | ||||| ||||||||||||
Sbjct: 419 cttcagattcgaacagttcttttgagtatccaggcactcttaagtgcaccaaatccagat 478
Query: 415 gatcctctctcagacaacattgcgaaacactggaaatcaaatgaagctgaagcttttgag 474
|| |||||||| || |||||||| || ||||||||||| ||||| || |||||| ||||
Sbjct: 479 gaccctctctctgaaaacattgccaagcactggaaatccaatgaggcagaagctgttgaa 538
Query: 475 acagcg 480
||||||
Sbjct: 539 acagcg 544
>gb|CV063002.1|CV063002 BNEL85e3 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL85e3 5' similar to
ubiquitin-conjugating enzyme, putative, mRNA sequence
Length = 723
Score = 404 bits (204), Expect = e-111
Identities = 396/460 (86%)
Strand = Plus / Plus
Query: 55 atggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcagcgaa 114
||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct: 75 atggccaacagcaacctcccgcgacgaatcatcaaggagacgcagaggctcctcagcgag 134
Query: 115 ccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgtcatg 174
||||| |||||||||||||| ||||| ||||| |||||||||||||| ||||| ||||||
Sbjct: 135 ccagctccggggattagcgcttcgccctcggaggagaacatgcggtatttcaacgtcatg 194
Query: 175 atccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctattcttg 234
|||||||| || || ||||| ||||| ||||| || ||||| ||||| || |||| ||
Sbjct: 195 atccttgggccggcgcagtcgccctacgaagggggggtttttaagctggaactatcttta 254
Query: 235 cctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttaccatccg 294
|| ||||||||||| ||||||||||| || ||||||||||| |||||||| || |||||
Sbjct: 255 cccgaggaatatccgatggctgccccaaaggttaggtttctgaccaaaatatatcatccc 314
Query: 295 aacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcccgct 354
|||||||||||||| |||| ||||||||| |||||||| ||||| ||||||||||| |||
Sbjct: 315 aacattgacaagctaggtacgatatgccttgacattctcaaggataaatggagtccggct 374
Query: 355 cttcagatacgtacagttctgctcagcattcaggcacttctgagtgccccaaatccagat 414
|||||||| || |||||||| || || |||||||| | ||||| ||||||||||||
Sbjct: 375 cttcagattcgaacagttctttcgagtatccaggcactcttaagtgcaccaaatccagat 434
Query: 415 gatcctctctcagacaacattgcgaaacactggaaatcaaatgaagctgaagcttttgag 474
|| |||||||| || |||||||| || ||||||||||| ||||| || |||||| ||||
Sbjct: 435 gaccctctctctgaaaacattgccaagcactggaaatccaatgaggcagaagctgttgaa 494
Query: 475 acagcgaaggagtggactcgcctgtatgcaagtggggcat 514
|||||||| |||||||| || ||||| || ||||| ||||
Sbjct: 495 acagcgaacgagtggacccgtctgtacgccagtggtgcat 534
>gb|AL511263.1|AL511263 AL511263 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY07I02u 3',
mRNA sequence
Length = 529
Score = 402 bits (203), Expect = e-111
Identities = 382/439 (87%), Gaps = 2/439 (0%)
Strand = Plus / Plus
Query: 55 atggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcagcgaa 114
||||||||||||||||||||||| ||||||||||||||||||||| | |||||||||||
Sbjct: 37 atggccaacagcaacctcccgcgacgaatcatcaaggagacgcagagactcctcagcgag 96
Query: 115 ccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgtcatg 174
||||| |||||||||||||| ||||| ||||| |||||||||||||| ||||| ||||||
Sbjct: 97 ccagctccggggattagcgcttcgccctcggaggagaacatgcggtatttcaacgtcatg 156
Query: 175 atccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctattcttg 234
|||||||| || || ||||| ||||| ||||| |||||||| ||||| || ||||| ||
Sbjct: 157 atccttgggccggcgcagtcgccctacgaagggggagtttttaagctggaactattttta 216
Query: 235 cctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttaccatccg 294
|| ||||||||||| ||||||||||| || ||||||||||| |||||||| || |||||
Sbjct: 217 cccgaggaatatccgatggctgccccaaaggttaggtttctgaccaaaatatatcatccc 276
Query: 295 aacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcccgct 354
||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||| |||
Sbjct: 277 aacattgacaagcttggtaggatatgccttgacattctcaaggataaatggagtccggct 336
Query: 355 cttcagatacgtacagttctgctcagcattc-aggcacttctgagtgccccaaatcc-ag 412
|||||||| || |||||||| | || || | ||||||| | ||||| |||||||| ||
Sbjct: 337 cttcagattcgaacagttcttttgagtatccaaggcactcttaagtgcaccaaatccaag 396
Query: 413 atgatcctctctcagacaacattgcgaaacactggaaatcaaatgaagctgaagcttttg 472
|||| |||||||| || |||||||| || ||||||||||| ||||| || ||||| |||
Sbjct: 397 atgaccctctctctgaaaacattgccaagcactggaaatccaatgaggcaaaagctgttg 456
Query: 473 agacagcgaaggagtggac 491
| |||||||||||||||||
Sbjct: 457 aaacagcgaaggagtggac 475
>gb|BQ765353.1|BQ765353 EBro03_SQ006_N19_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ006_N19 5', mRNA sequence
Length = 478
Score = 402 bits (203), Expect = e-111
Identities = 353/403 (87%)
Strand = Plus / Plus
Query: 55 atggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcagcgaa 114
||||||||||||||||||||||| ||||||||||||||||||||| | |||||||||||
Sbjct: 76 atggccaacagcaacctcccgcgacgaatcatcaaggagacgcagagactcctcagcgag 135
Query: 115 ccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgtcatg 174
||||| |||||||||||||| ||||| ||||| |||||||||||||| ||||| ||||||
Sbjct: 136 ccagctccggggattagcgcttcgccctcggaggagaacatgcggtatttcaacgtcatg 195
Query: 175 atccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctattcttg 234
|||||||| || || ||||| ||||| ||||| |||||||| ||||| || ||||| ||
Sbjct: 196 atccttgggccggcgcagtcgccctacgaagggggagtttttaagctggaactattttta 255
Query: 235 cctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttaccatccg 294
|| ||||||||||| ||||||||||| || ||||||||||| |||||||| || |||||
Sbjct: 256 cccgaggaatatccgatggctgccccaaaggttaggtttctgaccaaaatatatcatccc 315
Query: 295 aacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcccgct 354
||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||| |||
Sbjct: 316 aacattgacaagcttggtaggatatgccttgacattctcaaggataaatggagtccggct 375
Query: 355 cttcagatacgtacagttctgctcagcattcaggcacttctgagtgccccaaatccagat 414
|||||||| || |||||||| | || || |||||||| | ||||| ||||||||||||
Sbjct: 376 cttcagattcgaacagttcttttgagtatccaggcactcttaagtgcaccaaatccagat 435
Query: 415 gatcctctctcagacaacattgcgaaacactggaaatcaaatg 457
|| |||||||| || |||||||| || ||||||||||| ||||
Sbjct: 436 gaccctctctctgaaaacattgccaagcactggaaatccaatg 478
>gb|AV920058.1|AV920058 AV920058 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags9b20 3', mRNA sequence
Length = 712
Score = 394 bits (199), Expect = e-108
Identities = 373/431 (86%)
Strand = Plus / Minus
Query: 84 catcaaggagacgcagcggctcctcagcgaaccagcgccggggattagcgcgtcgccgtc 143
|||||||||||||||| | ||||||||||| ||||| |||||||||||||| ||||| ||
Sbjct: 712 catcaaggagacgcagagactcctcagcgagccagctccggggattagcgcttcgccctc 653
Query: 144 ggaagagaacatgcggtacttcaatgtcatgatccttggccccgcacagtcaccctatga 203
||| |||||||||||||| ||||| |||||||||||||| || || ||||| ||||| ||
Sbjct: 652 ggaggagaacatgcggtatttcaacgtcatgatccttgggccggcgcagtcgccctacga 593
Query: 204 aggtggagttttcaagcttgagctattcttgcctgaggaatatccaatggctgccccgaa 263
||| |||||||| ||||| || ||||| || || ||||||||||| ||||||||||| ||
Sbjct: 592 agggggagtttttaagctggaactatttttacccgaggaatatccgatggctgccccaaa 533
Query: 264 agttaggtttctcaccaaaatttaccatccgaacattgacaagcttggtaggatatgcct 323
||||||||||| |||||||| || ||||| |||||||||||||||||||||||||||||
Sbjct: 532 ggttaggtttctgaccaaaatatatcatcccaacattgacaagcttggtaggatatgcct 473
Query: 324 cgacattcttaaggacaaatggagtcccgctcttcagatacgtacagttctgctcagcat 383
|||||||| ||||| ||||||||||| ||||||||||| || |||||||| | || ||
Sbjct: 472 tgacattctcaaggataaatggagtccggctcttcagattcgaacagttcttttgagtat 413
Query: 384 tcaggcacttctgagtgccccaaatccagatgatcctctctcagacaacattgcgaaaca 443
|||||||| | ||||| |||||||||||||| |||||||| || |||||||| || ||
Sbjct: 412 ccaggcactcttaagtgcaccaaatccagatgaccctctctctgaaaacattgccaagca 353
Query: 444 ctggaaatcaaatgaagctgaagcttttgagacagcgaaggagtggactcgcctgtatgc 503
||||||||| ||||| || |||||| |||| ||||||||||||||||| || ||||| ||
Sbjct: 352 ctggaaatccaatgaggcagaagctgttgaaacagcgaaggagtggacccgtctgtacgc 293
Query: 504 aagtggggcat 514
||||| ||||
Sbjct: 292 cagtggtgcat 282
>gb|AV920164.1|AV920164 AV920164 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags9i14 3', mRNA sequence
Length = 686
Score = 389 bits (196), Expect = e-106
Identities = 370/428 (86%)
Strand = Plus / Minus
Query: 87 caaggagacgcagcggctcctcagcgaaccagcgccggggattagcgcgtcgccgtcgga 146
||||||||||||| | ||||||||||| ||||| |||||||||||||| ||||| |||||
Sbjct: 686 caaggagacgcagagactcctcagcgagccagctccggggattagcgcttcgccctcgga 627
Query: 147 agagaacatgcggtacttcaatgtcatgatccttggccccgcacagtcaccctatgaagg 206
|||||||||||||| ||||| |||||||||||||| || || ||||| ||||| |||||
Sbjct: 626 ggagaacatgcggtatttcaacgtcatgatccttgggccggcgcagtcgccctacgaagg 567
Query: 207 tggagttttcaagcttgagctattcttgcctgaggaatatccaatggctgccccgaaagt 266
|||||||| ||||| || ||||| || || ||||||||||| ||||||||||| || ||
Sbjct: 566 gggagtttttaagctggaactatttttacccgaggaatatccgatggctgccccaaaggt 507
Query: 267 taggtttctcaccaaaatttaccatccgaacattgacaagcttggtaggatatgcctcga 326
||||||||| |||||||| || ||||| ||||||||||||||||||||||||||||| ||
Sbjct: 506 taggtttctgaccaaaatatatcatcccaacattgacaagcttggtaggatatgccttga 447
Query: 327 cattcttaaggacaaatggagtcccgctcttcagatacgtacagttctgctcagcattca 386
|||||| ||||| ||||||||||| ||||||||||| || |||||||| | || || ||
Sbjct: 446 cattctcaaggataaatggagtccggctcttcagattcgaacagttcttttgagtatcca 387
Query: 387 ggcacttctgagtgccccaaatccagatgatcctctctcagacaacattgcgaaacactg 446
|||||| | ||||| |||||||||||||| |||||||| || |||||||| || |||||
Sbjct: 386 ggcactcttaagtgcaccaaatccagatgaccctctctctgaaaacattgccaagcactg 327
Query: 447 gaaatcaaatgaagctgaagcttttgagacagcgaaggagtggactcgcctgtatgcaag 506
|||||| ||||| || |||||| |||| ||||||||||||||||| || ||||| || ||
Sbjct: 326 gaaatccaatgaggcagaagctgttgaaacagcgaaggagtggacccgtctgtacgccag 267
Query: 507 tggggcat 514
||| ||||
Sbjct: 266 tggtgcat 259
>gb|AL508009.1|AL508009 AL508009 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY07I02V 5',
mRNA sequence
Length = 700
Score = 371 bits (187), Expect = e-101
Identities = 356/413 (86%)
Strand = Plus / Minus
Query: 102 gctcctcagcgaaccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggta 161
|||| ||||||| ||||| |||||||||||||| ||||| ||||| ||||||||||||||
Sbjct: 700 gctcntcagcgagccagctccggggattagcgcttcgccntcggaggagaacatgcggta 641
Query: 162 cttcaatgtcatgatccttggccccgcacagtcaccctatgaaggtggagttttcaagct 221
||||| |||||||||||||| || || ||||| ||||| ||||| |||||||| |||||
Sbjct: 640 tttcaacgtcatgatccttgggccggcgcagtcgccctacgaagggggagtttttaagct 581
Query: 222 tgagctattcttgcctgaggaatatccaatggctgccccgaaagttaggtttctcaccaa 281
|| ||||| || || ||||||||||| ||||||||||| || ||||||||||| |||||
Sbjct: 580 ggaactatttttacccgaggaatatccgatggctgccccaaaggttaggtttctgaccaa 521
Query: 282 aatttaccatccgaacattgacaagcttggtaggatatgcctcgacattcttaaggacaa 341
||| || ||||| ||||||||||||||||||||||||||||| |||||||| ||||| ||
Sbjct: 520 aatatatcatcccaacattgacaagcttggtaggatatgccttgacattctcaaggataa 461
Query: 342 atggagtcccgctcttcagatacgtacagttctgctcagcattcaggcacttctgagtgc 401
||||||||| ||||||||||| || |||||||| | || || |||||||| | |||||
Sbjct: 460 atggagtccggctcttcagattcgaacagttcttttgagtatccaggcactcttaagtgc 401
Query: 402 cccaaatccagatgatcctctctcagacaacattgcgaaacactggaaatcaaatgaagc 461
|||||||||||||| |||||||| || |||||||| || ||||||||||| ||||| ||
Sbjct: 400 accaaatccagatgaccctctctctgaaaacattgccaagcactggaaatccaatgaggc 341
Query: 462 tgaagcttttgagacagcgaaggagtggactcgcctgtatgcaagtggggcat 514
|||||| |||| ||||||||||||||||| || ||||| || ||||| ||||
Sbjct: 340 agaagctgttgaaacagcgaaggagtggacccgtctgtacgccagtggtgcat 288
>gb|BJ474724.1|BJ474724 BJ474724 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal20p06 3', mRNA sequence
Length = 713
Score = 365 bits (184), Expect = 2e-099
Identities = 354/411 (86%)
Strand = Plus / Minus
Query: 104 tcctcagcgaaccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtact 163
|||||||||| ||||| |||||||||||||| ||||| ||| | |||||||||||||| |
Sbjct: 713 tcctcagcgagccagctccggggattagcgcttcgccctcgnaggagaacatgcggtatt 654
Query: 164 tcaatgtcatgatccttggccccgcacagtcaccctatgaaggtggagttttcaagcttg 223
|||| |||||||||||||| || || ||||| ||||| ||||| |||||||| ||||| |
Sbjct: 653 tcaacgtcatgatccttgggccggcgcagtcgccctacgaagggggagtttttaagctgg 594
Query: 224 agctattcttgcctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaa 283
| ||||| || || ||||||||||| ||||||||||| || ||||||||||| |||||||
Sbjct: 593 aactatttttacccgaggaatatccgatggctgccccaaaggttaggtttctgaccaaaa 534
Query: 284 tttaccatccgaacattgacaagcttggtaggatatgcctcgacattcttaaggacaaat 343
| || ||||| ||||||||||||||||||||||||||||| |||||||| ||||| ||||
Sbjct: 533 tatatcatcccaacattgacaagcttggtaggatatgccttgacattctcaaggataaat 474
Query: 344 ggagtcccgctcttcagatacgtacagttctgctcagcattcaggcacttctgagtgccc 403
||||||| ||||||||||| || |||||||| | || || |||||||| | ||||| |
Sbjct: 473 ggagtccggctcttcagattcgaacagttcttttgagtatccaggcactcttaagtgcac 414
Query: 404 caaatccagatgatcctctctcagacaacattgcgaaacactggaaatcaaatgaagctg 463
||||||||||||| |||||||| || |||||||| || ||||||||||| ||||| || |
Sbjct: 413 caaatccagatgaccctctctctgaaaacattgccaagcactggaaatccaatgaggcag 354
Query: 464 aagcttttgagacagcgaaggagtggactcgcctgtatgcaagtggggcat 514
||||| |||| ||||||||||||||||| || ||||| || ||||| ||||
Sbjct: 353 aagctgttgaaacagcgaaggagtggacccgtctgtacgccagtggtgcat 303
>gb|BJ471447.1|BJ471447 BJ471447 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal18h12 5', mRNA sequence
Length = 426
Score = 363 bits (183), Expect = 6e-099
Identities = 316/361 (87%)
Strand = Plus / Plus
Query: 55 atggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcagcgaa 114
||||||||||||||||||||||| ||||||||||||||||||||| | |||||||||||
Sbjct: 66 atggccaacagcaacctcccgcgacgaatcatcaaggagacgcagagactcctcagcgag 125
Query: 115 ccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgtcatg 174
||||| |||||||||||||| ||||| ||||| |||||||||||||| ||||| ||||||
Sbjct: 126 ccagctccggggattagcgcttcgccctcggaggagaacatgcggtatttcaacgtcatg 185
Query: 175 atccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctattcttg 234
|||||||| || || ||||| ||||| ||||| |||||||| ||||| || ||||| ||
Sbjct: 186 atccttgggccggcgcagtcgccctacgaagggggagtttttaagctggaactattttta 245
Query: 235 cctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttaccatccg 294
|| ||||||||||| ||||||||||| || ||||||||||| |||||||| || |||||
Sbjct: 246 cccgaggaatatccgatggctgccccaaaggttaggtttctgaccaaaatatatcatccc 305
Query: 295 aacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcccgct 354
||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||| |||
Sbjct: 306 aacattgacaagcttggtaggatatgccttgacattctnaaggataaatggagtccggct 365
Query: 355 cttcagatacgtacagttctgctcagcattcaggcacttctgagtgccccaaatccagat 414
|||||||| || |||||||| | || || |||||||| | | ||| ||||||||||||
Sbjct: 366 cttcagattcgaacagttcttttgagtatccaggcactcttaantgcaccaaatccagat 425
Query: 415 g 415
|
Sbjct: 426 g 426
>gb|CA026296.1|CA026296 HZ55I02r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ55I02
5-PRIME, mRNA sequence
Length = 424
Score = 347 bits (175), Expect = 4e-094
Identities = 253/279 (90%)
Strand = Plus / Plus
Query: 51 ttccatggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcag 110
|||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct: 144 ttccatggccaacagcaacctcccgcgccggatcatcaaggagacgcagcggctgctcag 203
Query: 111 cgaaccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgt 170
||| |||||||||||||| ||||| |||||||| || ||||||||||| |||||||||||
Sbjct: 204 cgagccagcgccggggatcagcgcctcgccgtccgaggagaacatgcgctacttcaatgt 263
Query: 171 catgatccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctatt 230
|||| ||||||||||||| ||||| ||||| ||||||||||| ||||||||||| || ||
Sbjct: 264 catggtccttggccccgcgcagtcgccctacgaaggtggagtcttcaagcttgaactttt 323
Query: 231 cttgcctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttacca 290
||| || ||||||||||| |||||||| || |||||||||||||| || ||||| |||||
Sbjct: 324 cttacccgaggaatatccgatggctgctcctaaagttaggtttctgacaaaaatatacca 383
Query: 291 tccgaacattgacaagcttggtaggatatgcctcgacat 329
|| |||||||||||||||||||| ||||||||||||||
Sbjct: 384 ccccaacattgacaagcttggtagaatatgcctcgacat 422
>gb|BU982333.1|BU982333 HA26D10r HA Hordeum vulgare subsp. vulgare cDNA clone HA26D10
5-PRIME, mRNA sequence
Length = 395
Score = 333 bits (168), Expect = 5e-090
Identities = 264/296 (89%)
Strand = Plus / Plus
Query: 55 atggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcagcgaa 114
||||||||||||||||||||||| ||||||||||||||||||||| | |||||||||||
Sbjct: 96 atggccaacagcaacctcccgcgacgaatcatcaaggagacgcagagactcctcagcgag 155
Query: 115 ccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgtcatg 174
||||| |||||||||||||| ||||| ||||| |||||||||||||| ||||| ||||||
Sbjct: 156 ccagctccggggattagcgcttcgccctcggaggagaacatgcggtatttcaacgtcatg 215
Query: 175 atccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctattcttg 234
|||||||| || || ||||| ||||| ||||| |||||||| ||||| || ||||| ||
Sbjct: 216 atccttgggccggcgcagtcgccctacgaagggggagtttttaagctggaactattttta 275
Query: 235 cctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttaccatccg 294
|| ||||||||||| ||||||||||| || ||||||||||| |||||||| || |||||
Sbjct: 276 cccgaggaatatccgatggctgccccaaaggttaggtttctgaccaaaatatatcatccc 335
Query: 295 aacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcc 350
||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||
Sbjct: 336 aacattgacaagcttggtaggatatgccttgacattctcaaggataaatggagtcc 391
>gb|BU999885.1|BU999885 HS17C05u HS Hordeum vulgare subsp. vulgare cDNA clone HS17C05
3-PRIME, mRNA sequence
Length = 574
Score = 333 bits (168), Expect = 5e-090
Identities = 295/336 (87%), Gaps = 1/336 (0%)
Strand = Plus / Minus
Query: 160 tacttcaatgtcatgatccttggccccgcacagtcaccctatgaaggtggagttttcaag 219
||||| ||||||||| ||||||||||||| ||||| ||||| ||||||||||| ||||||
Sbjct: 572 tactttaatgtcatggtccttggccccgcgcagtcgccctacgaaggtggagtcttcaag 513
Query: 220 cttgagctattcttgcctgaggaatatccaatggctgccccgaaagttaggtttctcacc 279
||||| || ||||| || ||||||||||| |||||||| || |||||||||||||| ||
Sbjct: 512 cttgaacttttcttacccgaggaatatccgatggctgctcctaaagttaggtttctgaca 453
Query: 280 aaaattta-ccatccgaacattgacaagcttggtaggatatgcctcgacattcttaagga 338
||||| || ||| || |||||||||||||||||||| |||||||||||||| || |||||
Sbjct: 452 aaaatatanccaccccaacattgacaagcttggtagaatatgcctcgacatcctgaagga 393
Query: 339 caaatggagtcccgctcttcagatacgtacagttctgctcagcattcaggcacttctgag 398
||| |||||||| |||||||||||||| || ||||| | |||||||||||||| |||||
Sbjct: 392 caagtggagtccagctcttcagatacgcactgttcttttgagcattcaggcactgctgag 333
Query: 399 tgccccaaatccagatgatcctctctcagacaacattgcgaaacactggaaatcaaatga 458
|| ||||| |||||||||||||||||||| || | || |||||||||||||| |||||
Sbjct: 332 cgctccaaacccagatgatcctctctcagagaatgtcgcaaaacactggaaatccaatga 273
Query: 459 agctgaagcttttgagacagcgaaggagtggactcg 494
|||||||||| |||||||||||||||| ||||||||
Sbjct: 272 agctgaagctgttgagacagcgaaggaatggactcg 237
>gb|CA028029.1|CA028029 HZ60M14r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ60M14
5-PRIME, mRNA sequence
Length = 369
Score = 333 bits (168), Expect = 5e-090
Identities = 264/296 (89%)
Strand = Plus / Plus
Query: 55 atggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcagcgaa 114
||||||||||||||||||||||| ||||||||||||||||||||| | |||||||||||
Sbjct: 74 atggccaacagcaacctcccgcgacgaatcatcaaggagacgcagagactcctcagcgag 133
Query: 115 ccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgtcatg 174
||||| |||||||||||||| ||||| ||||| |||||||||||||| ||||| ||||||
Sbjct: 134 ccagctccggggattagcgcttcgccctcggaggagaacatgcggtatttcaacgtcatg 193
Query: 175 atccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctattcttg 234
|||||||| || || ||||| ||||| ||||| |||||||| ||||| || ||||| ||
Sbjct: 194 atccttgggccggcgcagtcgccctacgaagggggagtttttaagctggaactattttta 253
Query: 235 cctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttaccatccg 294
|| ||||||||||| ||||||||||| || ||||||||||| |||||||| || |||||
Sbjct: 254 cccgaggaatatccgatggctgccccaaaggttaggtttctgaccaaaatatatcatccc 313
Query: 295 aacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcc 350
||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||
Sbjct: 314 aacattgacaagcttggtaggatatgccttgacattctcaaggataaatggagtcc 369
>gb|CA001551.1|CA001551 HS17G11u HS Hordeum vulgare subsp. vulgare cDNA clone HS17G11
3-PRIME, mRNA sequence
Length = 571
Score = 331 bits (167), Expect = 2e-089
Identities = 294/335 (87%), Gaps = 1/335 (0%)
Strand = Plus / Minus
Query: 161 acttcaatgtcatgatccttggccccgcacagtcaccctatgaaggtggagttttcaagc 220
|||| ||||||||| ||||||||||||| ||||| ||||| ||||||||||| |||||||
Sbjct: 571 actttaatgtcatggtccttggccccgcgcagtcgccctacgaaggtggagtcttcaagc 512
Query: 221 ttgagctattcttgcctgaggaatatccaatggctgccccgaaagttaggtttctcacca 280
|||| || ||||| || ||||||||||| |||||||| || |||||||||||||| || |
Sbjct: 511 ttgaacttttcttacccgaggaatatccgatggctgctcctaaagttaggtttctgacaa 452
Query: 281 aaattta-ccatccgaacattgacaagcttggtaggatatgcctcgacattcttaaggac 339
|||| || ||| || |||||||||||||||||||| |||||||||||||| || ||||||
Sbjct: 451 aaatatanccaccccaacattgacaagcttggtagaatatgcctcgacatcctgaaggac 392
Query: 340 aaatggagtcccgctcttcagatacgtacagttctgctcagcattcaggcacttctgagt 399
|| |||||||| |||||||||||||| || ||||| | |||||||||||||| |||||
Sbjct: 391 aagtggagtccagctcttcagatacgcactgttcttttgagcattcaggcactgctgagc 332
Query: 400 gccccaaatccagatgatcctctctcagacaacattgcgaaacactggaaatcaaatgaa 459
|| ||||| |||||||||||||||||||| || | || |||||||||||||| ||||||
Sbjct: 331 gctccaaacccagatgatcctctctcagagaatgtcgcaaaacactggaaatccaatgaa 272
Query: 460 gctgaagcttttgagacagcgaaggagtggactcg 494
||||||||| |||||||||||||||| ||||||||
Sbjct: 271 gctgaagctgttgagacagcgaaggaatggactcg 237
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 76,077
Number of Sequences: 312970
Number of extensions: 76077
Number of successful extensions: 24201
Number of sequences better than 0.5: 230
Number of HSP's better than 0.5 without gapping: 230
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 23798
Number of HSP's gapped (non-prelim): 393
length of query: 825
length of database: 175,134,539
effective HSP length: 19
effective length of query: 806
effective length of database: 169,188,109
effective search space: 136365615854
effective search space used: 136365615854
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)