BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3184970.2.1
(1043 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BI948372.1|BI948372 HVSMEl0009E13f Hordeum vulgare spike... 121 5e-026
gb|BJ449472.1|BJ449472 BJ449472 K. Sato unpublished cDNA li... 113 1e-023
gb|BJ459432.1|BJ459432 BJ459432 K. Sato unpublished cDNA li... 113 1e-023
gb|CA022259.1|CA022259 HZ42J20r HZ Hordeum vulgare subsp. v... 113 1e-023
gb|BI946904.1|BI946904 HVSMEl0002L21f Hordeum vulgare spike... 105 3e-021
gb|BG367616.2|BG367616 HVSMEi0012P08f Hordeum vulgare 20 DA... 105 3e-021
gb|BI947511.1|BI947511 HVSMEl0005L16f Hordeum vulgare spike... 103 1e-020
gb|BE454845.1|BE454845 HVSMEh0095E05f Hordeum vulgare 5-45 ... 98 7e-019
gb|BG365536.1|BG365536 HVSMEi0003B22f Hordeum vulgare 20 DA... 98 7e-019
gb|BG367460.1|BG367460 HVSMEi0012F13f Hordeum vulgare 20 DA... 98 7e-019
gb|BI949025.1|BI949025 HVSMEl0012B07f Hordeum vulgare spike... 98 7e-019
gb|BG414755.1|BG414755 HVSMEk0003J19f Hordeum vulgare testa... 98 7e-019
gb|BG415203.1|BG415203 HVSMEk0005I16f Hordeum vulgare testa... 98 7e-019
gb|BG416746.1|BG416746 HVSMEk0014F08f Hordeum vulgare testa... 98 7e-019
gb|BG417971.1|BG417971 HVSMEk0020F20f Hordeum vulgare testa... 98 7e-019
gb|BE454492.3|BE454492 HVSMEh0094A02f Hordeum vulgare 5-45 ... 98 7e-019
gb|BE602672.2|BE602672 HVSMEh0101A21f Hordeum vulgare 5-45 ... 98 7e-019
gb|BG365634.2|BG365634 HVSMEi0003I02f Hordeum vulgare 20 DA... 98 7e-019
gb|BG369358.2|BG369358 HVSMEi0024B14f Hordeum vulgare 20 DA... 98 7e-019
gb|BG418257.2|BG418257 HVSMEk0022B19f Hordeum vulgare testa... 98 7e-019
gb|BE454366.3|BE454366 HVSMEh0093N17f Hordeum vulgare 5-45 ... 92 4e-017
gb|BE455238.3|BE455238 HVSMEh0096L08f Hordeum vulgare 5-45 ... 90 2e-016
gb|BE602548.3|BE602548 HVSMEh0099N16f Hordeum vulgare 5-45 ... 90 2e-016
gb|BG414551.2|BG414551 HVSMEk0002N14f Hordeum vulgare testa... 90 2e-016
gb|BQ465942.1|BQ465942 HT01C02T HT Hordeum vulgare subsp. v... 90 2e-016
gb|BQ466541.1|BQ466541 HT02N08r HT Hordeum vulgare subsp. v... 90 2e-016
gb|BM441867.2|BM441867 EBed07_SQ001_M10_R endosperm, 28 DPA... 90 2e-016
gb|BI780034.2|BI780034 EBma08_SQ001_D14_R maternal, 28 DPA,... 90 2e-016
gb|BM096890.2|BM096890 EBma08_SQ001_O17_R maternal, 28 DPA,... 90 2e-016
gb|BM371442.2|BM371442 EBma08_SQ002_M02_R maternal, 28 DPA,... 90 2e-016
gb|BM371550.2|BM371550 EBma08_SQ003_C16_R maternal, 28 DPA,... 90 2e-016
gb|BM371924.2|BM371924 EBma08_SQ004_G15_R maternal, 28 DPA,... 90 2e-016
gb|BQ755807.1|BQ755807 EBed07_SQ003_N15_R endosperm, 28 DPA... 90 2e-016
gb|BU984341.1|BU984341 HF03K16r HF Hordeum vulgare subsp. v... 90 2e-016
gb|BU988906.1|BU988906 HF19B23r HF Hordeum vulgare subsp. v... 90 2e-016
gb|CA012187.1|CA012187 HT04K16r HT Hordeum vulgare subsp. v... 90 2e-016
gb|CA013184.1|CA013184 HT07K10r HT Hordeum vulgare subsp. v... 90 2e-016
gb|CA013444.1|CA013444 HT08H14r HT Hordeum vulgare subsp. v... 90 2e-016
gb|CA014196.1|CA014196 HT10K16r HT Hordeum vulgare subsp. v... 90 2e-016
gb|BG417744.1|BG417744 HVSMEk0019F09f Hordeum vulgare testa... 88 7e-016
gb|BI947731.1|BI947731 HVSMEl0006K11f Hordeum vulgare spike... 84 1e-014
gb|BG366386.2|BG366386 HVSMEi0006N24f Hordeum vulgare 20 DA... 84 1e-014
gb|BI780179.2|BI780179 EBma08_SQ001_K01_R maternal, 28 DPA,... 84 1e-014
gb|BQ758640.1|BQ758640 EBma07_SQ002_J07_R maternal, 21 DPA,... 84 1e-014
gb|CA012410.1|CA012410 HT05F17r HT Hordeum vulgare subsp. v... 84 1e-014
gb|CA014966.1|CA014966 HT12N24r HT Hordeum vulgare subsp. v... 84 1e-014
gb|CA015187.1|CA015187 HT13I21r HT Hordeum vulgare subsp. v... 84 1e-014
gb|BE411224.1|BE411224 ISC003.D02F990524 ITEC ISC Barley Le... 82 4e-014
gb|BE411672.1|BE411672 ISC008.A09F990802 ITEC ISC Barley Le... 82 4e-014
gb|BG369588.2|BG369588 HVSMEi0025B12f Hordeum vulgare 20 DA... 82 4e-014
gb|AV926184.1|AV926184 AV926184 K. Sato unpublished cDNA li... 82 4e-014
gb|AV926193.1|AV926193 AV926193 K. Sato unpublished cDNA li... 82 4e-014
gb|AV926194.1|AV926194 AV926194 K. Sato unpublished cDNA li... 82 4e-014
gb|AV931065.1|AV931065 AV931065 K. Sato unpublished cDNA li... 82 4e-014
gb|AV933330.1|AV933330 AV933330 K. Sato unpublished cDNA li... 82 4e-014
gb|AV933371.1|AV933371 AV933371 K. Sato unpublished cDNA li... 82 4e-014
gb|AV933383.1|AV933383 AV933383 K. Sato unpublished cDNA li... 82 4e-014
gb|AV935770.1|AV935770 AV935770 K. Sato unpublished cDNA li... 82 4e-014
gb|AV935813.1|AV935813 AV935813 K. Sato unpublished cDNA li... 82 4e-014
gb|BJ469713.1|BJ469713 BJ469713 K. Sato unpublished cDNA li... 82 4e-014
gb|BJ476805.1|BJ476805 BJ476805 K. Sato unpublished cDNA li... 82 4e-014
gb|BM372933.2|BM372933 EBma04_SQ002_H02_R maternal, 10 DPA,... 82 4e-014
gb|CA022080.1|CA022080 HZ42B20r HZ Hordeum vulgare subsp. v... 82 4e-014
gb|CA026694.1|CA026694 HZ56K16r HZ Hordeum vulgare subsp. v... 82 4e-014
gb|CB858429.1|CB858429 HI06P17w HI Hordeum vulgare subsp. v... 82 4e-014
gb|CB877034.1|CB877034 HP03F07T HP Hordeum vulgare subsp. v... 82 4e-014
gb|CB879697.1|CB879697 HP03F07w HP Hordeum vulgare subsp. v... 82 4e-014
gb|CD663592.1|CD663592 UCRHV18_06aa04_b1 Drought-stressed D... 82 4e-014
gb|BM371530.2|BM371530 EBma08_SQ003_B11_R maternal, 28 DPA,... 80 2e-013
gb|BM371568.2|BM371568 EBma08_SQ003_D15_R maternal, 28 DPA,... 80 2e-013
gb|BE602375.2|BE602375 HVSMEh0098L01f Hordeum vulgare 5-45 ... 78 7e-013
gb|BG366443.1|BG366443 HVSMEi0007B04f Hordeum vulgare 20 DA... 78 7e-013
gb|BG366444.1|BG366444 HVSMEi0007B06f Hordeum vulgare 20 DA... 78 7e-013
gb|BG366294.2|BG366294 HVSMEi0006J18f Hordeum vulgare 20 DA... 78 7e-013
gb|BG368640.2|BG368640 HVSMEi0020A24f Hordeum vulgare 20 DA... 78 7e-013
gb|CA009849.1|CA009849 HT12N24u HT Hordeum vulgare subsp. v... 78 7e-013
emb|AJ400137.1|HVU400137 Hordeum vulgare subsp. vulgare par... 78 7e-013
gb|BG366514.1|BG366514 HVSMEi0007F02f Hordeum vulgare 20 DA... 76 3e-012
gb|BG368852.1|BG368852 HVSMEi0020P03f Hordeum vulgare 20 DA... 76 3e-012
gb|BI949464.1|BI949464 HVSMEl0014A17f Hordeum vulgare spike... 76 3e-012
gb|BE196066.3|BE196066 HVSMEh0091E09f Hordeum vulgare 5-45 ... 76 3e-012
gb|BG365745.2|BG365745 HVSMEi0004A12f Hordeum vulgare 20 DA... 76 3e-012
gb|BG365857.2|BG365857 HVSMEi0004I09f Hordeum vulgare 20 DA... 76 3e-012
gb|CB879149.1|CB879149 HP11B19T HP Hordeum vulgare subsp. v... 76 3e-012
gb|U02287.1|HVU02287 Hordeum vulgare cultivar NK1558 chitin... 76 3e-012
gb|AL499683.1|AL499683 AL499683 Hordeum vulgare Barke etiol... 74 1e-011
gb|AL500402.1|AL500402 AL500402 Hordeum vulgare Barke etiol... 74 1e-011
gb|BF257499.2|BF257499 HVSMEf0013B07f Hordeum vulgare seedl... 74 1e-011
gb|BG365326.1|BG365326 HVSMEi0002E22f Hordeum vulgare 20 DA... 74 1e-011
gb|BG368854.1|BG368854 HVSMEi0020P07f Hordeum vulgare 20 DA... 74 1e-011
gb|BI951167.1|BI951167 HVSMEl0024N04f Hordeum vulgare spike... 74 1e-011
gb|BG415997.2|BG415997 HVSMEk0009F15f Hordeum vulgare testa... 74 1e-011
gb|BF064981.3|BF064981 HV_CEb0022E17f Hordeum vulgare seedl... 74 1e-011
gb|BM368822.1|BM368822 EBem08_SQ004_L06_R embryo, 40 DPA, n... 74 1e-011
gb|BQ465191.1|BQ465191 HU02O12r HU Hordeum vulgare subsp. v... 74 1e-011
gb|BQ466147.1|BQ466147 HT01L11T HT Hordeum vulgare subsp. v... 74 1e-011
gb|BQ757012.1|BQ757012 EBem10_SQ002_I05_R embryo, 2 Day ger... 74 1e-011
gb|CA012210.1|CA012210 HT04M11r HT Hordeum vulgare subsp. v... 74 1e-011
gb|CA013166.1|CA013166 HT07J12r HT Hordeum vulgare subsp. v... 74 1e-011
gb|CA013604.1|CA013604 HT08P16r HT Hordeum vulgare subsp. v... 74 1e-011
gb|CA018162.1|CA018162 HV07L16r HV Hordeum vulgare subsp. v... 74 1e-011
gb|CA019539.1|CA019539 HV12E21r HV Hordeum vulgare subsp. v... 74 1e-011
emb|X15349.1|HVENDCHT Barley (H.vulgare) mRNA for endochiti... 74 1e-011
gb|BE195290.2|BE195290 HVSMEh0088N04f Hordeum vulgare 5-45 ... 72 4e-011
gb|BG368439.1|BG368439 HVSMEi0018M10f Hordeum vulgare 20 DA... 72 4e-011
gb|BQ758652.1|BQ758652 EBma07_SQ002_L09_R maternal, 21 DPA,... 72 4e-011
gb|BE422349.1|BE422349 HWM023cB.11r ITEC HWM Barley Leaf Li... 70 2e-010
gb|BF621706.2|BF621706 HVSMEa0011P10f Hordeum vulgare seedl... 70 2e-010
gb|BE454981.1|BE454981 HVSMEh0095L21f Hordeum vulgare 5-45 ... 70 2e-010
gb|BF259800.2|BF259800 HVSMEf0020E19f Hordeum vulgare seedl... 70 2e-010
gb|BI950473.1|BI950473 HVSMEl0020N22f Hordeum vulgare spike... 70 2e-010
gb|BI953201.1|BI953201 HVSMEm0011K01f Hordeum vulgare green... 70 2e-010
gb|BI954227.1|BI954227 HVSMEm0016L11f Hordeum vulgare green... 70 2e-010
gb|BI955968.1|BI955968 HVSMEm0025D17f Hordeum vulgare green... 70 2e-010
gb|BF064990.1|BF064990 HV_CEb0022F13f Hordeum vulgare seedl... 70 2e-010
gb|BF265978.2|BF265978 HV_CEa0013N09f Hordeum vulgare seedl... 70 2e-010
gb|BE214577.2|BE214577 HV_CEb0003N19f Hordeum vulgare seedl... 70 2e-010
gb|BF065377.2|BF065377 HV_CEb0012E08f Hordeum vulgare seedl... 70 2e-010
gb|BG368219.2|BG368219 HVSMEi0016L15f Hordeum vulgare 20 DA... 70 2e-010
gb|BE559387.2|BE559387 HV_CEb0024H02f Hordeum vulgare seedl... 70 2e-010
gb|AV935825.1|AV935825 AV935825 K. Sato unpublished cDNA li... 70 2e-010
gb|BQ659497.1|BQ659497 HE01J14u HE Hordeum vulgare subsp. v... 70 2e-010
gb|CA003742.1|CA003742 HS15G18r HS Hordeum vulgare subsp. v... 70 2e-010
gb|CA019311.1|CA019311 HV11J14r HV Hordeum vulgare subsp. v... 70 2e-010
gb|BJ544278.1|BJ544278 BJ544278 K. Sato unpublished cDNA li... 70 2e-010
gb|BJ544690.1|BJ544690 BJ544690 K. Sato unpublished cDNA li... 70 2e-010
gb|BJ544954.1|BJ544954 BJ544954 K. Sato unpublished cDNA li... 70 2e-010
gb|BJ545180.1|BJ545180 BJ545180 K. Sato unpublished cDNA li... 70 2e-010
gb|CB878161.1|CB878161 HP07J01T HP Hordeum vulgare subsp. v... 70 2e-010
emb|X78672.1|HVCHT2B H.vulgare mRNA for chitinase 2b 70 2e-010
gb|BI951414.1|BI951414 HVSMEl0025N19f Hordeum vulgare spike... 68 6e-010
gb|BE214283.1|BE214283 HV_CEb0003A01f Hordeum vulgare seedl... 68 6e-010
gb|BF065067.1|BF065067 HV_CEb0022N01f Hordeum vulgare seedl... 68 6e-010
gb|BF065694.2|BF065694 HV_CEb0013H08f Hordeum vulgare seedl... 68 6e-010
gb|BG301220.2|BG301220 HVSMEb0019P18f Hordeum vulgare seedl... 68 6e-010
gb|BF259671.3|BF259671 HVSMEf0019P07f Hordeum vulgare seedl... 68 6e-010
gb|BG365564.2|BG365564 HVSMEi0003D14f Hordeum vulgare 20 DA... 68 6e-010
gb|BG366607.2|BG366607 HVSMEi0007J19f Hordeum vulgare 20 DA... 68 6e-010
gb|BF065825.3|BF065825 HV_CEb0014B14f Hordeum vulgare seedl... 68 6e-010
gb|AV908961.1|AV908961 AV908961 K. Sato unpublished cDNA li... 68 6e-010
gb|AV910846.1|AV910846 AV910846 K. Sato unpublished cDNA li... 68 6e-010
gb|BJ449314.1|BJ449314 BJ449314 K. Sato unpublished cDNA li... 68 6e-010
gb|BJ456780.1|BJ456780 BJ456780 K. Sato unpublished cDNA li... 68 6e-010
gb|BQ663496.1|BQ663496 HU02O12u HU Hordeum vulgare subsp. v... 68 6e-010
gb|BI780166.2|BI780166 EBma08_SQ001_J11_R maternal, 28 DPA,... 68 6e-010
gb|CA016825.1|CA016825 HV05P04u HV Hordeum vulgare subsp. v... 68 6e-010
gb|CA017694.1|CA017694 HV05P04r HV Hordeum vulgare subsp. v... 68 6e-010
gb|CA018351.1|CA018351 HV08G01r HV Hordeum vulgare subsp. v... 68 6e-010
emb|X78671.1|HVCHT2A H.vulgare mRNA for chitinase 2a 68 6e-010
gb|BI949350.1|BI949350 HVSMEl0013H11f Hordeum vulgare spike... 66 2e-009
gb|BE216024.1|BE216024 HV_CEb0009C12f Hordeum vulgare seedl... 66 2e-009
gb|BG365157.2|BG365157 HVSMEi0001I15f Hordeum vulgare 20 DA... 66 2e-009
gb|BQ755873.1|BQ755873 EBed07_SQ003_G24_R endosperm, 28 DPA... 66 2e-009
gb|BG365887.1|BG365887 HVSMEi0004K07f Hordeum vulgare 20 DA... 64 1e-008
gb|BG369819.1|BG369819 HVSMEi0026C13f Hordeum vulgare 20 DA... 64 1e-008
gb|BI946596.1|BI946596 HVSMEl0001A13f Hordeum vulgare spike... 64 1e-008
gb|BG365415.2|BG365415 HVSMEi0002J15f Hordeum vulgare 20 DA... 64 1e-008
gb|AV931076.1|AV931076 AV931076 K. Sato unpublished cDNA li... 64 1e-008
gb|BM444050.1|BM444050 EBem09_SQ004_A02_R embryo, 1 Day ger... 64 1e-008
gb|CA010697.1|CA010697 HT08P16u HT Hordeum vulgare subsp. v... 64 1e-008
gb|CA013940.1|CA013940 HT09O20r HT Hordeum vulgare subsp. v... 64 1e-008
gb|CA014232.1|CA014232 HT10M05r HT Hordeum vulgare subsp. v... 64 1e-008
gb|CA016532.1|CA016532 HV08G01u HV Hordeum vulgare subsp. v... 64 1e-008
gb|CA018205.1|CA018205 HV07O23r HV Hordeum vulgare subsp. v... 64 1e-008
gb|BF628657.2|BF628657 HVSMEb0006P01f Hordeum vulgare seedl... 62 4e-008
gb|BF257249.2|BF257249 HVSMEf0012F06f Hordeum vulgare seedl... 62 4e-008
gb|BG365987.1|BG365987 HVSMEi0005K09f Hordeum vulgare 20 DA... 62 4e-008
gb|BI947443.1|BI947443 HVSMEl0005H24f Hordeum vulgare spike... 62 4e-008
gb|BI950475.1|BI950475 HVSMEl0020N24f Hordeum vulgare spike... 62 4e-008
gb|BI951463.1|BI951463 HVSMEm0001A11f Hordeum vulgare green... 62 4e-008
gb|BI952917.1|BI952917 HVSMEm0008F23f Hordeum vulgare green... 62 4e-008
gb|BI953910.1|BI953910 HVSMEm0015F08f Hordeum vulgare green... 62 4e-008
gb|BI955638.1|BI955638 HVSMEm0023N21f Hordeum vulgare green... 62 4e-008
gb|BE559371.1|BE559371 HV_CEb0024F08f Hordeum vulgare seedl... 62 4e-008
gb|BF066058.1|BF066058 HV_CEb0014L16f Hordeum vulgare seedl... 62 4e-008
gb|BF265236.1|BF265236 HV_CEa0011O17f Hordeum vulgare seedl... 62 4e-008
gb|BF266125.2|BF266125 HV_CEa0014D24f Hordeum vulgare seedl... 62 4e-008
gb|BE195244.3|BE195244 HVSMEh0088K24f Hordeum vulgare 5-45 ... 62 4e-008
gb|BG369571.2|BG369571 HVSMEi0024P21f Hordeum vulgare 20 DA... 62 4e-008
gb|BF265189.3|BF265189 HV_CEa0011I10f Hordeum vulgare seedl... 62 4e-008
gb|BE215473.3|BE215473 HV_CEb0006O09f Hordeum vulgare seedl... 62 4e-008
gb|BM444141.1|BM444141 EBem09_SQ004_E15_R embryo, 1 Day ger... 62 4e-008
gb|BQ755243.1|BQ755243 EBed07_SQ002_G06_R endosperm, 28 DPA... 62 4e-008
gb|BJ546657.1|BJ546657 BJ546657 K. Sato unpublished cDNA li... 62 4e-008
gb|BE195941.2|BE195941 HVSMEh0090O16f Hordeum vulgare 5-45 ... 60 2e-007
gb|BE602137.3|BE602137 HVSMEh0102K15f Hordeum vulgare 5-45 ... 60 2e-007
gb|BG366793.2|BG366793 HVSMEi0008F20f Hordeum vulgare 20 DA... 60 2e-007
gb|BM372862.1|BM372862 EBma04_SQ002_D08_R maternal, 10 DPA,... 60 2e-007
gb|BI952125.1|BI952125 HVSMEm0004L07f Hordeum vulgare green... 58 6e-007
gb|BI955596.1|BI955596 HVSMEm0023L14f Hordeum vulgare green... 58 6e-007
gb|BE214483.2|BE214483 HV_CEb0003J11f Hordeum vulgare seedl... 58 6e-007
gb|BE193259.3|BE193259 HVSMEh0080F13f Hordeum vulgare 5-45 ... 58 6e-007
gb|BG365754.2|BG365754 HVSMEi0004B04f Hordeum vulgare 20 DA... 58 6e-007
gb|AV911582.1|AV911582 AV911582 K. Sato unpublished cDNA li... 58 6e-007
gb|AV928645.1|AV928645 AV928645 K. Sato unpublished cDNA li... 58 6e-007
gb|AV929266.1|AV929266 AV929266 K. Sato unpublished cDNA li... 58 6e-007
gb|BJ543978.1|BJ543978 BJ543978 K. Sato unpublished cDNA li... 58 6e-007
gb|BJ544300.1|BJ544300 BJ544300 K. Sato unpublished cDNA li... 58 6e-007
gb|BJ544555.1|BJ544555 BJ544555 K. Sato unpublished cDNA li... 58 6e-007
gb|BJ544721.1|BJ544721 BJ544721 K. Sato unpublished cDNA li... 58 6e-007
gb|BJ544774.1|BJ544774 BJ544774 K. Sato unpublished cDNA li... 58 6e-007
gb|BJ545740.1|BJ545740 BJ545740 K. Sato unpublished cDNA li... 58 6e-007
gb|BJ546018.1|BJ546018 BJ546018 K. Sato unpublished cDNA li... 58 6e-007
gb|BJ546165.1|BJ546165 BJ546165 K. Sato unpublished cDNA li... 58 6e-007
gb|BJ546197.1|BJ546197 BJ546197 K. Sato unpublished cDNA li... 58 6e-007
gb|BJ546246.1|BJ546246 BJ546246 K. Sato unpublished cDNA li... 58 6e-007
gb|BJ546437.1|BJ546437 BJ546437 K. Sato unpublished cDNA li... 58 6e-007
emb|AJ276226.1|HVU276226 Hordeum vulgare mRNA for chitinase... 58 6e-007
gb|BE421938.1|BE421938 HWM016cG.08r ITEC HWM Barley Leaf Li... 56 2e-006
gb|AL450510.1|AL450510 AL450510 Hordeum vulgare Barke etiol... 56 2e-006
gb|BF257510.3|BF257510 HVSMEf0013B19f Hordeum vulgare seedl... 56 2e-006
gb|BG367660.2|BG367660 HVSMEi0013B21f Hordeum vulgare 20 DA... 56 2e-006
gb|BG369058.2|BG369058 HVSMEi0021J04f Hordeum vulgare 20 DA... 56 2e-006
gb|BG369545.2|BG369545 HVSMEi0024N21f Hordeum vulgare 20 DA... 56 2e-006
gb|AV910172.1|AV910172 AV910172 K. Sato unpublished cDNA li... 56 2e-006
gb|BJ449474.1|BJ449474 BJ449474 K. Sato unpublished cDNA li... 56 2e-006
gb|BJ451072.1|BJ451072 BJ451072 K. Sato unpublished cDNA li... 56 2e-006
gb|BJ451756.1|BJ451756 BJ451756 K. Sato unpublished cDNA li... 56 2e-006
gb|BJ458576.1|BJ458576 BJ458576 K. Sato unpublished cDNA li... 56 2e-006
gb|BJ459252.1|BJ459252 BJ459252 K. Sato unpublished cDNA li... 56 2e-006
gb|BQ660441.1|BQ660441 HI02J08u HI Hordeum vulgare subsp. v... 56 2e-006
gb|BM371578.2|BM371578 EBma08_SQ003_E01_R maternal, 28 DPA,... 56 2e-006
gb|BM371738.2|BM371738 EBma08_SQ003_M12_R maternal, 28 DPA,... 56 2e-006
gb|CA011984.1|CA011984 HT04B14r HT Hordeum vulgare subsp. v... 56 2e-006
gb|CA019044.1|CA019044 HV10J02r HV Hordeum vulgare subsp. v... 56 2e-006
gb|CB877320.1|CB877320 HP04G13T HP Hordeum vulgare subsp. v... 56 2e-006
gb|BG367092.2|BG367092 HVSMEi0010E09f Hordeum vulgare 20 DA... 54 1e-005
gb|BG368641.2|BG368641 HVSMEi0020B02f Hordeum vulgare 20 DA... 54 1e-005
gb|AV924171.1|AV924171 AV924171 K. Sato unpublished cDNA li... 54 1e-005
gb|AV925874.1|AV925874 AV925874 K. Sato unpublished cDNA li... 54 1e-005
gb|BF625707.2|BF625707 HVSMEa0013F08f Hordeum vulgare seedl... 52 4e-005
gb|BG300290.1|BG300290 HVSMEb0011P12f Hordeum vulgare seedl... 52 4e-005
gb|BG415850.1|BG415850 HVSMEk0008C15f Hordeum vulgare testa... 52 4e-005
gb|BF262973.2|BF262973 HV_CEa0005H11f Hordeum vulgare seedl... 52 4e-005
gb|AV909683.1|AV909683 AV909683 K. Sato unpublished cDNA li... 52 4e-005
gb|BJ546257.1|BJ546257 BJ546257 K. Sato unpublished cDNA li... 52 4e-005
gb|CB876675.1|CB876675 HP02A05T HP Hordeum vulgare subsp. v... 52 4e-005
gb|BF623602.2|BF623602 HVSMEa0002P13f Hordeum vulgare seedl... 50 1e-004
gb|BI949249.1|BI949249 HVSMEl0013A02f Hordeum vulgare spike... 50 1e-004
gb|BI954355.1|BI954355 HVSMEm0017G10f Hordeum vulgare green... 50 1e-004
gb|BI954922.1|BI954922 HVSMEm0020H05f Hordeum vulgare green... 50 1e-004
gb|BF264498.2|BF264498 HV_CEa0009J09f Hordeum vulgare seedl... 50 1e-004
gb|BM376427.1|BM376427 EBem05_SQ002_D05_R embryo, 14 DPA, n... 50 1e-004
gb|BM444668.1|BM444668 EBem09_SQ006_C06_R embryo, 1 Day ger... 48 6e-004
gb|BQ662085.1|BQ662085 HR01H21u HR Hordeum vulgare subsp. v... 48 6e-004
gb|CA015968.1|CA015968 HV10J02u HV Hordeum vulgare subsp. v... 48 6e-004
gb|BF619746.2|BF619746 HVSMEc0009B09f Hordeum vulgare seedl... 46 0.002
gb|BF263615.1|BF263615 HV_CEa0007D10f Hordeum vulgare seedl... 46 0.002
gb|BF264615.1|BF264615 HV_CEa0009O11f Hordeum vulgare seedl... 46 0.002
gb|BF265478.2|BF265478 HV_CEa0012G06f Hordeum vulgare seedl... 46 0.002
gb|BE216036.2|BE216036 HV_CEb0009D03f Hordeum vulgare seedl... 46 0.002
gb|BJ447651.1|BJ447651 BJ447651 K. Sato unpublished cDNA li... 46 0.002
gb|BJ455403.1|BJ455403 BJ455403 K. Sato unpublished cDNA li... 46 0.002
gb|BQ459546.1|BQ459546 HA08M17r HA Hordeum vulgare subsp. v... 46 0.002
gb|BM371934.2|BM371934 EBma08_SQ004_H03_R maternal, 28 DPA,... 46 0.002
gb|AL502023.1|AL502023 AL502023 Hordeum vulgare Barke roots... 44 0.009
gb|BF255193.2|BF255193 HVSMEf0006D08f Hordeum vulgare seedl... 44 0.009
gb|BE601801.2|BE601801 HVSMEh0099J11f Hordeum vulgare 5-45 ... 44 0.009
gb|AV908859.1|AV908859 AV908859 K. Sato unpublished cDNA li... 44 0.009
gb|BM441893.2|BM441893 EBed07_SQ001_N14_R endosperm, 28 DPA... 44 0.009
gb|BJ545495.1|BJ545495 BJ545495 K. Sato unpublished cDNA li... 44 0.009
gb|BF624009.3|BF624009 HVSMEa0008J10f Hordeum vulgare seedl... 42 0.036
gb|BG367072.1|BG367072 HVSMEi0010B13f Hordeum vulgare 20 DA... 42 0.036
gb|BG368322.1|BG368322 HVSMEi0017L06f Hordeum vulgare 20 DA... 42 0.036
gb|BI955506.1|BI955506 HVSMEm0023G08f Hordeum vulgare green... 42 0.036
gb|BE215793.1|BE215793 HV_CEb0008I03f Hordeum vulgare seedl... 42 0.036
gb|BE455567.3|BE455567 HVSMEg0017N15f Hordeum vulgare pre-a... 42 0.036
gb|BE196188.3|BE196188 HVSMEh0091J17f Hordeum vulgare 5-45 ... 42 0.036
gb|BG367233.2|BG367233 HVSMEi0011G09f Hordeum vulgare 20 DA... 42 0.036
gb|BG369253.2|BG369253 HVSMEi0023G17f Hordeum vulgare 20 DA... 42 0.036
gb|BM097251.1|BM097251 EBpi07_SQ002_O02_R pistil, 12 DPA, n... 42 0.036
gb|BM371518.2|BM371518 EBma08_SQ003_A17_R maternal, 28 DPA,... 42 0.036
gb|BM371743.2|BM371743 EBma08_SQ003_M18_R maternal, 28 DPA,... 42 0.036
gb|BF624146.2|BF624146 HVSMEa0012B06f Hordeum vulgare seedl... 40 0.14
gb|BF254308.2|BF254308 HVSMEf0003J17f Hordeum vulgare seedl... 40 0.14
gb|BG365956.1|BG365956 HVSMEi0005I01f Hordeum vulgare 20 DA... 40 0.14
gb|BG366254.1|BG366254 HVSMEi0006G16f Hordeum vulgare 20 DA... 40 0.14
gb|BE558718.1|BE558718 HV_CEb0020C16f Hordeum vulgare seedl... 40 0.14
gb|BE559148.1|BE559148 HV_CEb0023K15f Hordeum vulgare seedl... 40 0.14
gb|BJ459434.1|BJ459434 BJ459434 K. Sato unpublished cDNA li... 40 0.14
>gb|BI948372.1|BI948372 HVSMEl0009E13f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0009E13f, mRNA sequence
Length = 617
Score = 121 bits (61), Expect = 5e-026
Identities = 163/197 (82%)
Strand = Plus / Minus
Query: 379 ccgttgatgatgttggtgatgacgccgtagcccggaagcctccccgcggccttgtcggcg 438
|||||||||||||||||||| |||||||| || |||| |||||| || |||| ||||| |
Sbjct: 263 ccgttgatgatgttggtgatcacgccgtacccaggaaccctccctgccgcctggtcggtg 204
Query: 439 gccgagggggtccactgctcggtggccacgtcgtggcacgacggcttgggcggctgcgcc 498
|||||||| ||||| | ||||| ||||||||||| ||| || ||||| | ||||| |
Sbjct: 203 cccgaggggctccaccggccggtgatcacgtcgtggctcgaaggtttgggtgactgcggc 144
Query: 499 gtcatccagaaccagatggccgtcttgaaggagatgacggcgtccgacgccaccagctcc 558
|||||||||||||| | |||||||||||||| | | ||||||| |||||| || |||
Sbjct: 143 gtcatccagaaccacaacgccgtcttgaaggacacggtcgcgtccgtcgccacgaggtcc 84
Query: 559 gggttgctcagcaggtc 575
|||||| | ||||||||
Sbjct: 83 gggttgttgagcaggtc 67
Score = 73.8 bits (37), Expect = 1e-011
Identities = 55/61 (90%)
Strand = Plus / Minus
Query: 259 ggcctctggttgtagcagtccaagttgtcgccgtagctgatgccaaggatgtcgcagtag 318
|||||||||||||||||||||| |||||| |||||||||| ||| |||| |||||||||
Sbjct: 386 ggcctctggttgtagcagtccaggttgtctccgtagctgacgccgaggagatcgcagtag 327
Query: 319 c 319
|
Sbjct: 326 c 326
Score = 71.9 bits (36), Expect = 4e-011
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 601 gccggcccgtagttgtagttgtaggagagctggatgggcccgcg 644
|||||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 47 gccggcccgtagttgtagttgtgggagatctggatgggcccgcg 4
>gb|BJ449472.1|BJ449472 BJ449472 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak25c19 5', mRNA sequence
Length = 540
Score = 113 bits (57), Expect = 1e-023
Identities = 162/197 (82%)
Strand = Plus / Minus
Query: 379 ccgttgatgatgttggtgatgacgccgtagcccggaagcctccccgcggccttgtcggcg 438
|||||||||||||||||||| |||||||| || || | |||||| || |||| ||||| |
Sbjct: 240 ccgttgatgatgttggtgatcacgccgtacccaggcaccctccctgccgcctggtcggtg 181
Query: 439 gccgagggggtccactgctcggtggccacgtcgtggcacgacggcttgggcggctgcgcc 498
|||||||| ||||| | ||||| ||||||||||| ||| || ||||| | ||||| |
Sbjct: 180 cccgaggggctccaccggccggtgatcacgtcgtggctcgaaggtttgggtgactgcggc 121
Query: 499 gtcatccagaaccagatggccgtcttgaaggagatgacggcgtccgacgccaccagctcc 558
|||||||||||||| | |||||||||||||| | | ||||||| |||||| || |||
Sbjct: 120 gtcatccagaaccacaacgccgtcttgaaggacacggtcgcgtccgtcgccacgaggtcc 61
Query: 559 gggttgctcagcaggtc 575
|||||| | ||||||||
Sbjct: 60 gggttgttgagcaggtc 44
Score = 73.8 bits (37), Expect = 1e-011
Identities = 55/61 (90%)
Strand = Plus / Minus
Query: 259 ggcctctggttgtagcagtccaagttgtcgccgtagctgatgccaaggatgtcgcagtag 318
|||||||||||||||||||||| |||||| |||||||||| ||| |||| |||||||||
Sbjct: 363 ggcctctggttgtagcagtccaggttgtctccgtagctgacgccgaggagatcgcagtag 304
Query: 319 c 319
|
Sbjct: 303 c 303
Score = 44.1 bits (22), Expect = 0.009
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 601 gccggcccgtagttgtagttgt 622
||||||||||||||||||||||
Sbjct: 24 gccggcccgtagttgtagttgt 3
>gb|BJ459432.1|BJ459432 BJ459432 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak25c19 3', mRNA sequence
Length = 534
Score = 113 bits (57), Expect = 1e-023
Identities = 162/197 (82%)
Strand = Plus / Plus
Query: 379 ccgttgatgatgttggtgatgacgccgtagcccggaagcctccccgcggccttgtcggcg 438
|||||||||||||||||||| |||||||| || || | |||||| || |||| ||||| |
Sbjct: 295 ccgttgatgatgttggtgatcacgccgtacccaggcaccctccctgccgcctggtcggtg 354
Query: 439 gccgagggggtccactgctcggtggccacgtcgtggcacgacggcttgggcggctgcgcc 498
|||||||| ||||| | ||||| ||||||||||| ||| || ||||| | ||||| |
Sbjct: 355 cccgaggggctccaccggccggtgatcacgtcgtggctcgaaggtttgggtgactgcggc 414
Query: 499 gtcatccagaaccagatggccgtcttgaaggagatgacggcgtccgacgccaccagctcc 558
|||||||||||||| | |||||||||||||| | | ||||||| |||||| || |||
Sbjct: 415 gtcatccagaaccacaacgccgtcttgaaggacacggtcgcgtccgtcgccacgaggtcc 474
Query: 559 gggttgctcagcaggtc 575
|||||| | ||||||||
Sbjct: 475 gggttgttgagcaggtc 491
Score = 73.8 bits (37), Expect = 1e-011
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 259 ggcctctggttgtagcagtccaagttgtcgccgtagctgatgccaaggatgtcgcagtag 318
|||||||||||||||||||||| |||||| |||||||||| ||| |||| |||||||||
Sbjct: 172 ggcctctggttgtagcagtccaggttgtctccgtagctgacgccgaggagatcgcagtag 231
Query: 319 c 319
|
Sbjct: 232 c 232
Score = 44.1 bits (22), Expect = 0.009
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 601 gccggcccgtagttgtagttgt 622
||||||||||||||||||||||
Sbjct: 511 gccggcccgtagttgtagttgt 532
>gb|CA022259.1|CA022259 HZ42J20r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ42J20
5-PRIME, mRNA sequence
Length = 507
Score = 113 bits (57), Expect = 1e-023
Identities = 162/197 (82%)
Strand = Plus / Plus
Query: 379 ccgttgatgatgttggtgatgacgccgtagcccggaagcctccccgcggccttgtcggcg 438
|||||||||||||||||||| |||||||| || || | |||||| || |||| ||||| |
Sbjct: 300 ccgttgatgatgttggtgatcacgccgtacccaggcaccctccctgccgcctggtcggtg 359
Query: 439 gccgagggggtccactgctcggtggccacgtcgtggcacgacggcttgggcggctgcgcc 498
|||||||| ||||| | ||||| ||||||||||| ||| || ||||| | ||||| |
Sbjct: 360 cccgaggggctccaccggccggtgatcacgtcgtggctcgaaggtttgggtgactgcggc 419
Query: 499 gtcatccagaaccagatggccgtcttgaaggagatgacggcgtccgacgccaccagctcc 558
|||||||||||||| | |||||||||||||| | | ||||||| |||||| || |||
Sbjct: 420 gtcatccagaaccacaacgccgtcttgaaggacacggtcgcgtccgtcgccacgaggtcc 479
Query: 559 gggttgctcagcaggtc 575
|||||| | ||||||||
Sbjct: 480 gggttgttgagcaggtc 496
Score = 73.8 bits (37), Expect = 1e-011
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 259 ggcctctggttgtagcagtccaagttgtcgccgtagctgatgccaaggatgtcgcagtag 318
|||||||||||||||||||||| |||||| |||||||||| ||| |||| |||||||||
Sbjct: 177 ggcctctggttgtagcagtccaggttgtctccgtagctgacgccgaggagatcgcagtag 236
Query: 319 c 319
|
Sbjct: 237 c 237
>gb|BI946904.1|BI946904 HVSMEl0002L21f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0002L21f, mRNA sequence
Length = 839
Score = 105 bits (53), Expect = 3e-021
Identities = 76/81 (93%), Gaps = 2/81 (2%)
Strand = Plus / Minus
Query: 601 gccggcccgtagttgtagttgtaggagagctggatgggcccgcggccgaagtacttcttg 660
|||||||||||||||||||||| ||||| ||||||||||||||| |||||||||||||||
Sbjct: 463 gccggcccgtagttgtagttgtgggagatctggatgggcccgcgcccgaagtacttcttg 404
Query: 661 cc-ggcgacgcacggccactg 680
|| |||| |||||||||||||
Sbjct: 403 cccggcg-cgcacggccactg 384
Score = 83.8 bits (42), Expect = 1e-014
Identities = 160/198 (80%), Gaps = 1/198 (0%)
Strand = Plus / Minus
Query: 379 ccgttgatgatgttggtgatgacgccgtagcccggaagcctccccgcggccttgt-cggc 437
|||||||||||||||||||| || ||||| || |||| |||||| || | || || |||
Sbjct: 680 ccgttgatgatgttggtgatcaccccgtacccaggaaccctccctgccggctggttcggt 621
Query: 438 ggccgagggggtccactgctcggtggccacgtcgtggcacgacggcttgggcggctgcgc 497
| || ||||| ||||| || ||||| ||||||||||| ||| || ||||| | |||||
Sbjct: 620 gcccaaggggctccacggcccggtgatcacgtcgtggctcgaaggtttgggtgactgcgg 561
Query: 498 cgtcatccagaaccagatggccgtcttgaaggagatgacggcgtccgacgccaccagctc 557
||||||||||||||| | |||||||||||||| | | ||||| | |||||| || ||
Sbjct: 560 cgtcatccagaaccacaacgccgtcttgaaggacacggtcgcgtcagtcgccacgaggtc 501
Query: 558 cgggttgctcagcaggtc 575
||||||| | ||||||||
Sbjct: 500 cgggttgttgagcaggtc 483
Score = 81.8 bits (41), Expect = 4e-014
Identities = 80/93 (86%)
Strand = Plus / Minus
Query: 702 gcagtagtcggcggtggcgccgttctcctccttgtagcagtagccccaggtgaaggcgcc 761
||||||||||| |||||||||| ||||| ||| ||||||||||||||| | ||| |||
Sbjct: 371 gcagtagtcggaggtggcgccgcgctcctggttgaagcagtagccccaggagtaggggcc 312
Query: 762 gtcgggcgcgttcggccagccgcccgtggtctc 794
||||||||| ||||||| ||||| ||||||||
Sbjct: 311 gtcgggcgccgtcggccacccgccggtggtctc 279
>gb|BG367616.2|BG367616 HVSMEi0012P08f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0012P08f, mRNA sequence
Length = 710
Score = 105 bits (53), Expect = 3e-021
Identities = 76/81 (93%), Gaps = 2/81 (2%)
Strand = Plus / Minus
Query: 601 gccggcccgtagttgtagttgtaggagagctggatgggcccgcggccgaagtacttcttg 660
|||||||||||||||||||||| ||||| ||||||||||||||| |||||||||||||||
Sbjct: 673 gccggcccgtagttgtagttgtgggagatctggatgggcccgcgcccgaagtacttcttg 614
Query: 661 cc-ggcgacgcacggccactg 680
|| |||| |||||||||||||
Sbjct: 613 cccggcg-cgcacggccactg 594
Score = 52.0 bits (26), Expect = 4e-005
Identities = 78/94 (82%), Gaps = 1/94 (1%)
Strand = Plus / Minus
Query: 702 gcagtagtcggcggtggcgccgttctcctccttgtagcagtag-ccccaggtgaaggcgc 760
|||||||||| |||||||||| ||||| ||| | |||||| ||||||| | ||| ||
Sbjct: 581 gcagtagtcgaaggtggcgccgcgctcctggttgaaccagtaggccccaggagtaggggc 522
Query: 761 cgtcgggcgcgttcggccagccgcccgtggtctc 794
|||||||||| ||||||| ||||| ||||||||
Sbjct: 521 cgtcgggcgccgtcggccacccgccggtggtctc 488
>gb|BI947511.1|BI947511 HVSMEl0005L16f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0005L16f, mRNA sequence
Length = 505
Score = 103 bits (52), Expect = 1e-020
Identities = 127/152 (83%)
Strand = Plus / Plus
Query: 379 ccgttgatgatgttggtgatgacgccgtagcccggaagcctccccgcggccttgtcggcg 438
|||||||||||||||||||| |||||||| || |||| |||||| || |||| ||||| |
Sbjct: 332 ccgttgatgatgttggtgatcacgccgtacccaggaaccctccctgccgcctggtcggtg 391
Query: 439 gccgagggggtccactgctcggtggccacgtcgtggcacgacggcttgggcggctgcgcc 498
|||||||| ||||| | ||||| ||||||||||| ||| || ||||| | ||||| |
Sbjct: 392 cccgaggggctccaccggccggtgatcacgtcgtggctcgaaggtttgggtgactgcggc 451
Query: 499 gtcatccagaaccagatggccgtcttgaagga 530
|||||||| ||||| | ||||||||||||||
Sbjct: 452 gtcatccaaaaccacaacgccgtcttgaagga 483
Score = 73.8 bits (37), Expect = 1e-011
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 259 ggcctctggttgtagcagtccaagttgtcgccgtagctgatgccaaggatgtcgcagtag 318
|||||||||||||||||||||| |||||| |||||||||| ||| |||| |||||||||
Sbjct: 209 ggcctctggttgtagcagtccaggttgtctccgtagctgacgccgaggagatcgcagtag 268
Query: 319 c 319
|
Sbjct: 269 c 269
>gb|BE454845.1|BE454845 HVSMEh0095E05f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0095E05f, mRNA sequence
Length = 717
Score = 97.6 bits (49), Expect = 7e-019
Identities = 52/53 (98%)
Strand = Plus / Plus
Query: 472 tggcacgacggcttgggcggctgcgccgtcatccagaaccagatggccgtctt 524
|||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 tggctcgacggcttgggcggctgcgccgtcatccagaaccagatggccgtctt 431
Score = 65.9 bits (33), Expect = 2e-009
Identities = 59/68 (86%)
Strand = Plus / Plus
Query: 613 ttgtagttgtaggagagctggatgggcccgcggccgaagtacttcttgccggcgacgcac 672
|||||||||| |||||||| |||||||||||||||| |||| ||| |||| | |||||
Sbjct: 514 ttgtagttgtgggagagcttgatgggcccgcggccgtagtagcgcttnccgggggcgcac 573
Query: 673 ggccactg 680
||||||||
Sbjct: 574 ggccactg 581
>gb|BG365536.1|BG365536 HVSMEi0003B22f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0003B22f, mRNA sequence
Length = 805
Score = 97.6 bits (49), Expect = 7e-019
Identities = 52/53 (98%)
Strand = Plus / Minus
Query: 472 tggcacgacggcttgggcggctgcgccgtcatccagaaccagatggccgtctt 524
|||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 tggctcgacggcttgggcggctgcgccgtcatccagaaccagatggccgtctt 492
Score = 77.8 bits (39), Expect = 7e-013
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 610 tagttgtagttgtaggagagctggatgggcccgcggccgaagtacttcttgccggcgacg 669
||||||||||||| ||||||||||||||||||||||||| |||| ||| |||| | ||
Sbjct: 412 tagttgtagttgtgggagagctggatgggcccgcggccgtagtagcgcttcccgggggcg 353
Query: 670 cacggccactg 680
|||||||||||
Sbjct: 352 cacggccactg 342
Score = 75.8 bits (38), Expect = 3e-012
Identities = 170/214 (79%)
Strand = Plus / Minus
Query: 702 gcagtagtcggcggtggcgccgttctcctccttgtagcagtagccccaggtgaaggcgcc 761
||||||||||| || ||||||| |||| |||| ||||||||||||||| |||||| ||
Sbjct: 329 gcagtagtcggaggaggcgccgcgttcctgcttgaagcagtagccccaggcgaaggcccc 270
Query: 762 gtcgggcgcgttcggccagccgcccgtggtctcatgccccgtctgccccaagaacgcggc 821
||| || || ||| ||| ||||| |||||||| || ||||| ||| ||| |||||
Sbjct: 269 gtccggtgccgtcgcccatccgccggtggtctcgtgggaggtctgggccaggaaggcggc 210
Query: 822 gagctcgcgcttctggacctccgtgctgcccgtggtgccgaagccccggaacgcgtccgc 881
| ||||||||||||| | || | |||||| ||| ||||||||||| |||| || ||
Sbjct: 209 cacctcgcgcttctgggcgtcggcgctgccggtgctgccgaagcccgggaaggcagatgc 150
Query: 882 cgccgtgatgaaggcgtcgtacgtgtagaagccc 915
|| | || |||||||||||| ||||||||||||
Sbjct: 149 ggcggcgacgaaggcgtcgtaggtgtagaagccc 116
>gb|BG367460.1|BG367460 HVSMEi0012F13f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0012F13f, mRNA sequence
Length = 705
Score = 97.6 bits (49), Expect = 7e-019
Identities = 75/81 (92%), Gaps = 2/81 (2%)
Strand = Plus / Minus
Query: 601 gccggcccgtagttgtagttgtaggagagctggatgggcccgcggccgaagtacttcttg 660
||||||| |||||||||||||| ||||| ||||||||||||||| |||||||||||||||
Sbjct: 674 gccggccggtagttgtagttgtgggagatctggatgggcccgcgcccgaagtacttcttg 615
Query: 661 cc-ggcgacgcacggccactg 680
|| |||| |||||||||||||
Sbjct: 614 cccggcg-cgcacggccactg 595
Score = 81.8 bits (41), Expect = 4e-014
Identities = 80/93 (86%)
Strand = Plus / Minus
Query: 702 gcagtagtcggcggtggcgccgttctcctccttgtagcagtagccccaggtgaaggcgcc 761
||||||||||| |||||||||| ||||| ||| ||||||||||||||| | ||| |||
Sbjct: 582 gcagtagtcggaggtggcgccgcgctcctggttgaagcagtagccccaggagtaggggcc 523
Query: 762 gtcgggcgcgttcggccagccgcccgtggtctc 794
||||||||| ||||||| ||||| ||||||||
Sbjct: 522 gtcgggcgccgtcggccacccgccggtggtctc 490
>gb|BI949025.1|BI949025 HVSMEl0012B07f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0012B07f, mRNA sequence
Length = 854
Score = 97.6 bits (49), Expect = 7e-019
Identities = 52/53 (98%)
Strand = Plus / Minus
Query: 472 tggcacgacggcttgggcggctgcgccgtcatccagaaccagatggccgtctt 524
|||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 tggctcgacggcttgggcggctgcgccgtcatccagaaccagatggccgtctt 204
Score = 77.8 bits (39), Expect = 7e-013
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 610 tagttgtagttgtaggagagctggatgggcccgcggccgaagtacttcttgccggcgacg 669
||||||||||||| ||||||||||||||||||||||||| |||| ||| |||| | ||
Sbjct: 124 tagttgtagttgtgggagagctggatgggcccgcggccgtagtagcgcttcccgggggcg 65
Query: 670 cacggccactg 680
|||||||||||
Sbjct: 64 cacggccactg 54
>gb|BG414755.1|BG414755 HVSMEk0003J19f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0003J19f, mRNA sequence
Length = 625
Score = 97.6 bits (49), Expect = 7e-019
Identities = 52/53 (98%)
Strand = Plus / Minus
Query: 472 tggcacgacggcttgggcggctgcgccgtcatccagaaccagatggccgtctt 524
|||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 tggctcgacggcttgggcggctgcgccgtcatccagaaccagatggccgtctt 184
Score = 77.8 bits (39), Expect = 7e-013
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 610 tagttgtagttgtaggagagctggatgggcccgcggccgaagtacttcttgccggcgacg 669
||||||||||||| ||||||||||||||||||||||||| |||| ||| |||| | ||
Sbjct: 104 tagttgtagttgtgggagagctggatgggcccgcggccgtagtagcgcttcccgggggcg 45
Query: 670 cacggccactg 680
|||||||||||
Sbjct: 44 cacggccactg 34
>gb|BG415203.1|BG415203 HVSMEk0005I16f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0005I16f, mRNA sequence
Length = 908
Score = 97.6 bits (49), Expect = 7e-019
Identities = 52/53 (98%)
Strand = Plus / Minus
Query: 472 tggcacgacggcttgggcggctgcgccgtcatccagaaccagatggccgtctt 524
|||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 tggctcgacggcttgggcggctgcgccgtcatccagaaccagatggccgtctt 308
Score = 77.8 bits (39), Expect = 7e-013
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 610 tagttgtagttgtaggagagctggatgggcccgcggccgaagtacttcttgccggcgacg 669
||||||||||||| ||||||||||||||||||||||||| |||| ||| |||| | ||
Sbjct: 228 tagttgtagttgtgggagagctggatgggcccgcggccgtagtagcgcttcccgggggcg 169
Query: 670 cacggccactg 680
|||||||||||
Sbjct: 168 cacggccactg 158
Score = 58.0 bits (29), Expect = 6e-007
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 255 gaagggcctctggttgtagcagtccaagttgtcgccgtagctgatgccaaggatgtcgca 314
|||||| ||||||||||||||||| | ||||| |||||||| | ||| |||||||| ||
Sbjct: 580 gaagggtctctggttgtagcagtcgaggttgttgccgtagccaacgccgaggatgtcaca 521
Query: 315 gtagc 319
|||||
Sbjct: 520 gtagc 516
Score = 58.0 bits (29), Expect = 6e-007
Identities = 77/93 (82%)
Strand = Plus / Minus
Query: 702 gcagtagtcggcggtggcgccgttctcctccttgtagcagtagccccaggtgaaggcgcc 761
||||||||||| || ||||||| |||| |||| ||||||||||||||| |||||| ||
Sbjct: 145 gcagtagtcggaggaggcgccgcgttcctgcttgaagcagtagccccaggcgaaggcccc 86
Query: 762 gtcgggcgcgttcggccagccgcccgtggtctc 794
||| || || ||| ||| ||||| ||||||||
Sbjct: 85 gtccggtgccgtcgcccatccgccggtggtctc 53
>gb|BG416746.1|BG416746 HVSMEk0014F08f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0014F08f, mRNA sequence
Length = 682
Score = 97.6 bits (49), Expect = 7e-019
Identities = 52/53 (98%)
Strand = Plus / Minus
Query: 472 tggcacgacggcttgggcggctgcgccgtcatccagaaccagatggccgtctt 524
|||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tggctcgacggcttgggcggctgcgccgtcatccagaaccagatggccgtctt 508
Score = 77.8 bits (39), Expect = 7e-013
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 610 tagttgtagttgtaggagagctggatgggcccgcggccgaagtacttcttgccggcgacg 669
||||||||||||| ||||||||||||||||||||||||| |||| ||| |||| | ||
Sbjct: 428 tagttgtagttgtgggagagctggatgggcccgcggccgtagtagcgcttcccgggggcg 369
Query: 670 cacggccactg 680
|||||||||||
Sbjct: 368 cacggccactg 358
Score = 75.8 bits (38), Expect = 3e-012
Identities = 170/214 (79%)
Strand = Plus / Minus
Query: 702 gcagtagtcggcggtggcgccgttctcctccttgtagcagtagccccaggtgaaggcgcc 761
||||||||||| || ||||||| |||| |||| ||||||||||||||| |||||| ||
Sbjct: 345 gcagtagtcggaggaggcgccgcgttcctgcttgaagcagtagccccaggcgaaggcccc 286
Query: 762 gtcgggcgcgttcggccagccgcccgtggtctcatgccccgtctgccccaagaacgcggc 821
||| || || ||| ||| ||||| |||||||| || ||||| ||| ||| |||||
Sbjct: 285 gtccggtgccgtcgcccatccgccggtggtctcgtgggaggtctgggccaggaaggcggc 226
Query: 822 gagctcgcgcttctggacctccgtgctgcccgtggtgccgaagccccggaacgcgtccgc 881
| ||||||||||||| | || | |||||| ||| ||||||||||| |||| || ||
Sbjct: 225 cacctcgcgcttctgggcgtcggcgctgccggtgctgccgaagcccgggaaggcagatgc 166
Query: 882 cgccgtgatgaaggcgtcgtacgtgtagaagccc 915
|| | || |||||||||||| ||||||||||||
Sbjct: 165 ggcggcgacgaaggcgtcgtaggtgtagaagccc 132
>gb|BG417971.1|BG417971 HVSMEk0020F20f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0020F20f, mRNA sequence
Length = 468
Score = 97.6 bits (49), Expect = 7e-019
Identities = 52/53 (98%)
Strand = Plus / Minus
Query: 472 tggcacgacggcttgggcggctgcgccgtcatccagaaccagatggccgtctt 524
|||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 tggctcgacggcttgggcggctgcgccgtcatccagaaccagatggccgtctt 175
>gb|BE454492.3|BE454492 HVSMEh0094A02f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0094A02f, mRNA sequence
Length = 688
Score = 97.6 bits (49), Expect = 7e-019
Identities = 52/53 (98%)
Strand = Plus / Minus
Query: 472 tggcacgacggcttgggcggctgcgccgtcatccagaaccagatggccgtctt 524
|||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 tggctcgacggcttgggcggctgcgccgtcatccagaaccagatggccgtctt 228
Score = 77.8 bits (39), Expect = 7e-013
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 610 tagttgtagttgtaggagagctggatgggcccgcggccgaagtacttcttgccggcgacg 669
||||||||||||| ||||||||||||||||||||||||| |||| ||| |||| | ||
Sbjct: 148 tagttgtagttgtgggagagctggatgggcccgcggccgtagtagcgcttcccgggggcg 89
Query: 670 cacggccactg 680
|||||||||||
Sbjct: 88 cacggccactg 78
Score = 54.0 bits (27), Expect = 1e-005
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 702 gcagtagtcggcggtggcgccgttctcctccttgtagcagtagccccaggtgaaggcgcc 761
||||||||||| || ||||||| |||| |||| ||||||||||||||| |||||| ||
Sbjct: 65 gcagtagtcggaggaggcgccgcgttcctgcttgaagcagtagccccaggcgaaggcccc 6
Query: 762 gtc 764
|||
Sbjct: 5 gtc 3
>gb|BE602672.2|BE602672 HVSMEh0101A21f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0101A21f, mRNA sequence
Length = 730
Score = 97.6 bits (49), Expect = 7e-019
Identities = 52/53 (98%)
Strand = Plus / Minus
Query: 472 tggcacgacggcttgggcggctgcgccgtcatccagaaccagatggccgtctt 524
|||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 tggctcgacggcttgggcggctgcgccgtcatccagaaccagatggccgtctt 515
Score = 79.8 bits (40), Expect = 2e-013
Identities = 73/84 (86%)
Strand = Plus / Minus
Query: 597 cccggccggcccgtagttgtagttgtaggagagctggatgggcccgcggccgaagtactt 656
|||||| || || ||||||||||||| ||||||||||||||||||||||||| ||||
Sbjct: 447 cccggcaggtccatagttgtagttgtgggagagctggatgggcccgcggccgtagtagcg 388
Query: 657 cttgccggcgacgcacggccactg 680
||| |||| | |||||||||||||
Sbjct: 387 cttcccgggggcgcacggccactg 364
Score = 75.8 bits (38), Expect = 3e-012
Identities = 170/214 (79%)
Strand = Plus / Minus
Query: 702 gcagtagtcggcggtggcgccgttctcctccttgtagcagtagccccaggtgaaggcgcc 761
||||||||||| || ||||||| |||| |||| ||||||||||||||| |||||| ||
Sbjct: 351 gcagtagtcggaggaggcgccgcgttcctgcttgaagcagtagccccaggcgaaggcccc 292
Query: 762 gtcgggcgcgttcggccagccgcccgtggtctcatgccccgtctgccccaagaacgcggc 821
||| || || ||| ||| ||||| |||||||| || ||||| ||| ||| |||||
Sbjct: 291 gtccggtgccgtcgcccatccgccggtggtctcgtgggaggtctgggccaggaaggcggc 232
Query: 822 gagctcgcgcttctggacctccgtgctgcccgtggtgccgaagccccggaacgcgtccgc 881
| ||||||||||||| | || | |||||| ||| ||||||||||| |||| || ||
Sbjct: 231 cacctcgcgcttctgggcgtcggcgctgccggtgctgccgaagcccgggaaggcagatgc 172
Query: 882 cgccgtgatgaaggcgtcgtacgtgtagaagccc 915
|| | || |||||||||||| ||||||||||||
Sbjct: 171 ggcggcgacgaaggcgtcgtaggtgtagaagccc 138
>gb|BG365634.2|BG365634 HVSMEi0003I02f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0003I02f, mRNA sequence
Length = 741
Score = 97.6 bits (49), Expect = 7e-019
Identities = 52/53 (98%)
Strand = Plus / Minus
Query: 472 tggcacgacggcttgggcggctgcgccgtcatccagaaccagatggccgtctt 524
|||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 tggctcgacggcttgggcggctgcgccgtcatccagaaccagatggccgtctt 576
Score = 77.8 bits (39), Expect = 7e-013
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 610 tagttgtagttgtaggagagctggatgggcccgcggccgaagtacttcttgccggcgacg 669
||||||||||||| ||||||||||||||||||||||||| |||| ||| |||| | ||
Sbjct: 496 tagttgtagttgtgggagagctggatgggcccgcggccgtagtagcgcttcccgggggcg 437
Query: 670 cacggccactg 680
|||||||||||
Sbjct: 436 cacggccactg 426
Score = 75.8 bits (38), Expect = 3e-012
Identities = 170/214 (79%)
Strand = Plus / Minus
Query: 702 gcagtagtcggcggtggcgccgttctcctccttgtagcagtagccccaggtgaaggcgcc 761
||||||||||| || ||||||| |||| |||| ||||||||||||||| |||||| ||
Sbjct: 413 gcagtagtcggaggaggcgccgcgttcctgcttgaagcagtagccccaggcgaaggcccc 354
Query: 762 gtcgggcgcgttcggccagccgcccgtggtctcatgccccgtctgccccaagaacgcggc 821
||| || || ||| ||| ||||| |||||||| || ||||| ||| ||| |||||
Sbjct: 353 gtccggtgccgtcgcccatccgccggtggtctcgtgggaggtctgggccaggaaggcggc 294
Query: 822 gagctcgcgcttctggacctccgtgctgcccgtggtgccgaagccccggaacgcgtccgc 881
| ||||||||||||| | || | |||||| ||| ||||||||||| |||| || ||
Sbjct: 293 cacctcgcgcttctgggcgtcggcgctgccggtgctgccgaagcccgggaaggcagatgc 234
Query: 882 cgccgtgatgaaggcgtcgtacgtgtagaagccc 915
|| | || |||||||||||| ||||||||||||
Sbjct: 233 ggcggcgacgaaggcgtcgtaggtgtagaagccc 200
>gb|BG369358.2|BG369358 HVSMEi0024B14f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0024B14f, mRNA sequence
Length = 904
Score = 97.6 bits (49), Expect = 7e-019
Identities = 52/53 (98%)
Strand = Plus / Minus
Query: 472 tggcacgacggcttgggcggctgcgccgtcatccagaaccagatggccgtctt 524
|||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 tggctcgacggcttgggcggctgcgccgtcatccagaaccagatggccgtctt 228
Score = 77.8 bits (39), Expect = 7e-013
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 610 tagttgtagttgtaggagagctggatgggcccgcggccgaagtacttcttgccggcgacg 669
||||||||||||| ||||||||||||||||||||||||| |||| ||| |||| | ||
Sbjct: 148 tagttgtagttgtgggagagctggatgggcccgcggccgtagtagcgcttcccgggggcg 89
Query: 670 cacggccactg 680
|||||||||||
Sbjct: 88 cacggccactg 78
Score = 54.0 bits (27), Expect = 1e-005
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 702 gcagtagtcggcggtggcgccgttctcctccttgtagcagtagccccaggtgaaggcgcc 761
||||||||||| || ||||||| |||| |||| ||||||||||||||| |||||| ||
Sbjct: 65 gcagtagtcggaggaggcgccgcgttcctgcttgaagcagtagccccaggcgaaggcccc 6
Query: 762 gtc 764
|||
Sbjct: 5 gtc 3
>gb|BG418257.2|BG418257 HVSMEk0022B19f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0022B19f, mRNA sequence
Length = 392
Score = 97.6 bits (49), Expect = 7e-019
Identities = 52/53 (98%)
Strand = Plus / Minus
Query: 472 tggcacgacggcttgggcggctgcgccgtcatccagaaccagatggccgtctt 524
|||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88 tggctcgacggcttgggcggctgcgccgtcatccagaaccagatggccgtctt 36
>gb|BE454366.3|BE454366 HVSMEh0093N17f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0093N17f, mRNA sequence
Length = 968
Score = 91.7 bits (46), Expect = 4e-017
Identities = 51/53 (96%)
Strand = Plus / Minus
Query: 472 tggcacgacggcttgggcggctgcgccgtcatccagaaccagatggccgtctt 524
|||| ||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 646 tggctcgacggcttgggcggntgcgccgtcatccagaaccagatggccgtctt 594
Score = 69.9 bits (35), Expect = 2e-010
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 610 tagttgtagttgtaggagagctggatgggcccgcggccgaagtacttcttgccggcgacg 669
||||| ||||||| ||||||||||||||||||||||||| |||| ||| |||| | ||
Sbjct: 514 tagttctagttgtgggagagctggatgggcccgcggccgtagtagcgcttcccgggggcg 455
Query: 670 cacggccactg 680
|||||||||||
Sbjct: 454 cacggccactg 444
Score = 58.0 bits (29), Expect = 6e-007
Identities = 140/177 (79%)
Strand = Plus / Minus
Query: 739 cagtagccccaggtgaaggcgccgtcgggcgcgttcggccagccgcccgtggtctcatgc 798
||||||||||||| |||||| ||||| || || ||| ||| ||||| |||||||| ||
Sbjct: 385 cagtagccccaggcgaaggccccgtccggtgccgtcgcccatccgccggtggtctcgtgg 326
Query: 799 cccgtctgccccaagaacgcggcgagctcgcgcttctggacctccgtgctgcccgtggtg 858
||||| ||| ||| ||||| | ||||||||||||| | || | |||||| ||| ||
Sbjct: 325 gaggtctgggccaggaaggcggccacctcgcgcttctgggcgtcggcgctgccggtgctg 266
Query: 859 ccgaagccccggaacgcgtccgccgccgtgatgaaggcgtcgtacgtgtagaagccc 915
||||||||| |||| || || || | || |||||||||||| ||||||||||||
Sbjct: 265 ccgaagcccgggaaggcagatgcggcggcgacgaaggcgtcgtaggtgtagaagccc 209
>gb|BE455238.3|BE455238 HVSMEh0096L08f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0096L08f, mRNA sequence
Length = 710
Score = 89.7 bits (45), Expect = 2e-016
Identities = 51/53 (96%)
Strand = Plus / Minus
Query: 472 tggcacgacggcttgggcggctgcgccgtcatccagaaccagatggccgtctt 524
|||| ||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 631 tggctcgacggcttgggcggttgcgccgtcatccagaaccagatggccgtctt 579
Score = 77.8 bits (39), Expect = 7e-013
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 610 tagttgtagttgtaggagagctggatgggcccgcggccgaagtacttcttgccggcgacg 669
||||||||||||| ||||||||||||||||||||||||| |||| ||| |||| | ||
Sbjct: 499 tagttgtagttgtgggagagctggatgggcccgcggccgtagtagcgcttcccgggggcg 440
Query: 670 cacggccactg 680
|||||||||||
Sbjct: 439 cacggccactg 429
Score = 75.8 bits (38), Expect = 3e-012
Identities = 170/214 (79%)
Strand = Plus / Minus
Query: 702 gcagtagtcggcggtggcgccgttctcctccttgtagcagtagccccaggtgaaggcgcc 761
||||||||||| || ||||||| |||| |||| ||||||||||||||| |||||| ||
Sbjct: 416 gcagtagtcggaggaggcgccgcgttcctgcttgaagcagtagccccaggcgaaggcccc 357
Query: 762 gtcgggcgcgttcggccagccgcccgtggtctcatgccccgtctgccccaagaacgcggc 821
||| || || ||| ||| ||||| |||||||| || ||||| ||| ||| |||||
Sbjct: 356 gtccggtgccgtcgcccatccgccggtggtctcgtgggaggtctgggccaggaaggcggc 297
Query: 822 gagctcgcgcttctggacctccgtgctgcccgtggtgccgaagccccggaacgcgtccgc 881
| ||||||||||||| | || | |||||| ||| ||||||||||| |||| || ||
Sbjct: 296 cacctcgcgcttctgggcgtcggcgctgccggtgctgccgaagcccgggaaggcagatgc 237
Query: 882 cgccgtgatgaaggcgtcgtacgtgtagaagccc 915
|| | || |||||||||||| ||||||||||||
Sbjct: 236 ggcggcgacgaaggcgtcgtaggtgtagaagccc 203
>gb|BE602548.3|BE602548 HVSMEh0099N16f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0099N16f, mRNA sequence
Length = 730
Score = 89.7 bits (45), Expect = 2e-016
Identities = 241/305 (79%), Gaps = 6/305 (1%)
Strand = Plus / Minus
Query: 378 gccgttgatgatgttggtgatgacgccgtagcccggaagcctccccgcggccttgtcggc 437
||||||||||||||||||||||||||| ||||| || | |||| |||| || ||||| ||
Sbjct: 423 gccgttgatgatgttggtgatgacgccatagccgggcaccctctccgccgcgttgtctgc 364
Query: 438 ggccgagggggtccactgctcggtggccacgtcgtggcacgacggcttgggcggctgcgc 497
||||| || ||||| || | ||| |||| |||| | ||||||||| | |||||
Sbjct: 363 ggccgtcggcgtccattggcccgtgatcacggcgtgagaggacggcttgttggcctgcgg 304
Query: 498 cgtcatccagaaccagatggccgtcttgaaggagatgacggcgtccgacgccaccagctc 557
||||||||||||||| | |||||||||||||| | | ||| |||| |||||||| ||
Sbjct: 303 cgtcatccagaaccatagtgccgtcttgaaggacacggtggcatccgtggccaccaggtc 244
Query: 558 cgggttgctcagcaggtcctgggcgatggtcgcgtcctccccggccggcccgtagttgta 617
||||||| | ||||||||| | |||||| |||| |||||| || |||||||||||
Sbjct: 243 cgggttgttgagcaggtccacgccgatgg-cgcg-----cccggcagggccgtagttgta 190
Query: 618 gttgtaggagagctggatgggcccgcggccgaagtacttcttgccggcgacgcacggcca 677
||| | |||||| |||||| ||||||||| |||| | | |||| |||||||||||
Sbjct: 189 gttccatgagagcatgatggggccgcggccgtagtattgcctgccttgcacgcacggcca 130
Query: 678 ctggg 682
|||||
Sbjct: 129 ctggg 125
Score = 52.0 bits (26), Expect = 4e-005
Identities = 57/66 (86%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 255 gaagggcctctggtt-gtagcagtccaagttgtcgccgtagctgatgccaaggatgtcgc 313
||||||||||||||| ||||||||| | |||| | ||||||| || | ||||||||| ||
Sbjct: 550 gaagggcctctggtttgtagcagtcgaggttgcccccgtagccgacgtcaaggatgttgc 491
Query: 314 agtagc 319
||||||
Sbjct: 490 agtagc 485
Score = 48.1 bits (24), Expect = 6e-004
Identities = 54/64 (84%)
Strand = Plus / Minus
Query: 734 tgtagcagtagccccaggtgaaggcgccgtcgggcgcgttcggccagccgcccgtggtct 793
|||||||||||||||||| | ||| |||||| ||||| | | ||| ||||| |||||||
Sbjct: 82 tgtagcagtagccccaggagtaggggccgtcaggcgcagtggcccaaccgccggtggtct 23
Query: 794 catg 797
||||
Sbjct: 22 catg 19
>gb|BG414551.2|BG414551 HVSMEk0002N14f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0002N14f, mRNA sequence
Length = 805
Score = 89.7 bits (45), Expect = 2e-016
Identities = 51/53 (96%)
Strand = Plus / Minus
Query: 472 tggcacgacggcttgggcggctgcgccgtcatccagaaccagatggccgtctt 524
|||| ||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 636 tggctcgacggcttgggcggttgcgccgtcatccagaaccagatggccgtctt 584
Score = 77.8 bits (39), Expect = 7e-013
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 610 tagttgtagttgtaggagagctggatgggcccgcggccgaagtacttcttgccggcgacg 669
||||||||||||| ||||||||||||||||||||||||| |||| ||| |||| | ||
Sbjct: 504 tagttgtagttgtgggagagctggatgggcccgcggccgtagtagcgcttcccgggggcg 445
Query: 670 cacggccactg 680
|||||||||||
Sbjct: 444 cacggccactg 434
Score = 75.8 bits (38), Expect = 3e-012
Identities = 170/214 (79%)
Strand = Plus / Minus
Query: 702 gcagtagtcggcggtggcgccgttctcctccttgtagcagtagccccaggtgaaggcgcc 761
||||||||||| || ||||||| |||| |||| ||||||||||||||| |||||| ||
Sbjct: 421 gcagtagtcggaggaggcgccgcgttcctgcttgaagcagtagccccaggcgaaggcccc 362
Query: 762 gtcgggcgcgttcggccagccgcccgtggtctcatgccccgtctgccccaagaacgcggc 821
||| || || ||| ||| ||||| |||||||| || ||||| ||| ||| |||||
Sbjct: 361 gtccggtgccgtcgcccatccgccggtggtctcgtgggaggtctgggccaggaaggcggc 302
Query: 822 gagctcgcgcttctggacctccgtgctgcccgtggtgccgaagccccggaacgcgtccgc 881
| ||||||||||||| | || | |||||| ||| ||||||||||| |||| || ||
Sbjct: 301 cacctcgcgcttctgggcgtcggcgctgccggtgctgccgaagcccgggaaggcagatgc 242
Query: 882 cgccgtgatgaaggcgtcgtacgtgtagaagccc 915
|| | || |||||||||||| ||||||||||||
Sbjct: 241 ggcggcgacgaaggcgtcgtaggtgtagaagccc 208
>gb|BQ465942.1|BQ465942 HT01C02T HT Hordeum vulgare subsp. vulgare cDNA clone HT01C02
5-PRIME, mRNA sequence
Length = 642
Score = 89.7 bits (45), Expect = 2e-016
Identities = 51/53 (96%)
Strand = Plus / Minus
Query: 472 tggcacgacggcttgggcggctgcgccgtcatccagaaccagatggccgtctt 524
|||| ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 tggctcgatggcttgggcggctgcgccgtcatccagaaccagatggccgtctt 223
Score = 63.9 bits (32), Expect = 1e-008
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 610 tagttgtagttgtaggagagctggatgggcccgcggccgaagta 653
||||||||||||| |||||||||||| |||||||||||| ||||
Sbjct: 143 tagttgtagttgtgggagagctggatcggcccgcggccgtagta 100
Score = 42.1 bits (21), Expect = 0.036
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 378 gccgttgatgatgttggtgat 398
|||||||||||||||||||||
Sbjct: 369 gccgttgatgatgttggtgat 349
>gb|BQ466541.1|BQ466541 HT02N08r HT Hordeum vulgare subsp. vulgare cDNA clone HT02N08
5-PRIME, mRNA sequence
Length = 536
Score = 89.7 bits (45), Expect = 2e-016
Identities = 51/53 (96%)
Strand = Plus / Minus
Query: 472 tggcacgacggcttgggcggctgcgccgtcatccagaaccagatggccgtctt 524
|||| ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 tggctcgatggcttgggcggctgcgccgtcatccagaaccagatggccgtctt 233
Score = 63.9 bits (32), Expect = 1e-008
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 610 tagttgtagttgtaggagagctggatgggcccgcggccgaagta 653
||||||||||||| |||||||||||| |||||||||||| ||||
Sbjct: 153 tagttgtagttgtgggagagctggatcggcccgcggccgtagta 110
Score = 42.1 bits (21), Expect = 0.036
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 378 gccgttgatgatgttggtgat 398
|||||||||||||||||||||
Sbjct: 379 gccgttgatgatgttggtgat 359
Score = 42.1 bits (21), Expect = 0.036
Identities = 48/57 (84%)
Strand = Plus / Minus
Query: 702 gcagtagtcggcggtggcgccgttctcctccttgtagcagtagccccaggtgaaggc 758
||||||||||| || |||||| |||| |||| ||||||||||||||| ||||||
Sbjct: 70 gcagtagtcggaggaggcgccacgttcctgcttgaagcagtagccccaggcgaaggc 14
>gb|BM441867.2|BM441867 EBed07_SQ001_M10_R endosperm, 28 DPA, no treatment, cv Optic,
EBed07 Hordeum vulgare subsp. vulgare cDNA clone
EBed07_SQ001_M10 5', mRNA sequence
Length = 646
Score = 89.7 bits (45), Expect = 2e-016
Identities = 51/53 (96%)
Strand = Plus / Minus
Query: 472 tggcacgacggcttgggcggctgcgccgtcatccagaaccagatggccgtctt 524
|||| ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 tggctcgatggcttgggcggctgcgccgtcatccagaaccagatggccgtctt 564
Score = 83.8 bits (42), Expect = 1e-014
Identities = 171/214 (79%)
Strand = Plus / Minus
Query: 702 gcagtagtcggcggtggcgccgttctcctccttgtagcagtagccccaggtgaaggcgcc 761
||||||||||| || |||||| |||| |||| ||||||||||||||| |||||| ||
Sbjct: 401 gcagtagtcggaggaggcgccacgttcctgcttgaagcagtagccccaggcgaaggcccc 342
Query: 762 gtcgggcgcgttcggccagccgcccgtggtctcatgccccgtctgccccaagaacgcggc 821
||| || || ||| ||| ||||| |||||||| || ||||| | | ||| |||||
Sbjct: 341 gtccggtgcagtcgcccacccgccggtggtctcgtgggaggtctgtgctaggaaggcggc 282
Query: 822 gagctcgcgcttctggacctccgtgctgcccgtggtgccgaagccccggaacgcgtccgc 881
| ||||||||||||| | || | |||||| ||||||||||||||| |||| ||| | ||
Sbjct: 281 cacctcgcgcttctgggcgtcggcgctgccggtggtgccgaagcccgggaaggcggctgc 222
Query: 882 cgccgtgatgaaggcgtcgtacgtgtagaagccc 915
|| | || |||||||||||| ||||||||||||
Sbjct: 221 ggcggcgacgaaggcgtcgtaggtgtagaagccc 188
Score = 63.9 bits (32), Expect = 1e-008
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 610 tagttgtagttgtaggagagctggatgggcccgcggccgaagta 653
||||||||||||| |||||||||||| |||||||||||| ||||
Sbjct: 484 tagttgtagttgtgggagagctggatcggcccgcggccgtagta 441
>gb|BI780034.2|BI780034 EBma08_SQ001_D14_R maternal, 28 DPA, no treatment, cv Optic, EBma08
Hordeum vulgare subsp. vulgare cDNA clone
EBma08_SQ001_D14 5', mRNA sequence
Length = 647
Score = 89.7 bits (45), Expect = 2e-016
Identities = 51/53 (96%)
Strand = Plus / Minus
Query: 472 tggcacgacggcttgggcggctgcgccgtcatccagaaccagatggccgtctt 524
|||| ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 tggctcgatggcttgggcggctgcgccgtcatccagaaccagatggccgtctt 238
Score = 63.9 bits (32), Expect = 1e-008
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 610 tagttgtagttgtaggagagctggatgggcccgcggccgaagta 653
||||||||||||| |||||||||||| |||||||||||| ||||
Sbjct: 158 tagttgtagttgtgggagagctggatcggcccgcggccgtagta 115
Score = 46.1 bits (23), Expect = 0.002
Identities = 53/63 (84%)
Strand = Plus / Minus
Query: 702 gcagtagtcggcggtggcgccgttctcctccttgtagcagtagccccaggtgaaggcgcc 761
||||||||||| || |||||| |||| |||| ||||||||||||||| |||||| ||
Sbjct: 75 gcagtagtcggaggaggcgccacgttcctgcttgaagcagtagccccaggcgaaggcccc 16
Query: 762 gtc 764
|||
Sbjct: 15 gtc 13
Score = 42.1 bits (21), Expect = 0.036
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 378 gccgttgatgatgttggtgat 398
|||||||||||||||||||||
Sbjct: 384 gccgttgatgatgttggtgat 364
>gb|BM096890.2|BM096890 EBma08_SQ001_O17_R maternal, 28 DPA, no treatment, cv Optic, EBma08
Hordeum vulgare subsp. vulgare cDNA clone
EBma08_SQ001_O17 5', mRNA sequence
Length = 486
Score = 89.7 bits (45), Expect = 2e-016
Identities = 51/53 (96%)
Strand = Plus / Minus
Query: 472 tggcacgacggcttgggcggctgcgccgtcatccagaaccagatggccgtctt 524
|||| ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 tggctcgatggcttgggcggctgcgccgtcatccagaaccagatggccgtctt 133
Score = 63.9 bits (32), Expect = 1e-008
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 610 tagttgtagttgtaggagagctggatgggcccgcggccgaagta 653
||||||||||||| |||||||||||| |||||||||||| ||||
Sbjct: 53 tagttgtagttgtgggagagctggatcggcccgcggccgtagta 10
Score = 42.1 bits (21), Expect = 0.036
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 378 gccgttgatgatgttggtgat 398
|||||||||||||||||||||
Sbjct: 279 gccgttgatgatgttggtgat 259
>gb|BM371442.2|BM371442 EBma08_SQ002_M02_R maternal, 28 DPA, no treatment, cv Optic, EBma08
Hordeum vulgare subsp. vulgare cDNA clone
EBma08_SQ002_M02 5', mRNA sequence
Length = 548
Score = 89.7 bits (45), Expect = 2e-016
Identities = 51/53 (96%)
Strand = Plus / Minus
Query: 472 tggcacgacggcttgggcggctgcgccgtcatccagaaccagatggccgtctt 524
|||| ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 tggctcgatggcttgggcggctgcgccgtcatccagaaccagatggccgtctt 132
Score = 63.9 bits (32), Expect = 1e-008
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 610 tagttgtagttgtaggagagctggatgggcccgcggccgaagta 653
||||||||||||| |||||||||||| |||||||||||| ||||
Sbjct: 52 tagttgtagttgtgggagagctggatcggcccgcggccgtagta 9
Score = 42.1 bits (21), Expect = 0.036
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 378 gccgttgatgatgttggtgat 398
|||||||||||||||||||||
Sbjct: 278 gccgttgatgatgttggtgat 258
>gb|BM371550.2|BM371550 EBma08_SQ003_C16_R maternal, 28 DPA, no treatment, cv Optic, EBma08
Hordeum vulgare subsp. vulgare cDNA clone
EBma08_SQ003_C16 5', mRNA sequence
Length = 305
Score = 89.7 bits (45), Expect = 2e-016
Identities = 51/53 (96%)
Strand = Plus / Minus
Query: 472 tggcacgacggcttgggcggctgcgccgtcatccagaaccagatggccgtctt 524
|||| ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 tggctcgatggcttgggcggctgcgccgtcatccagaaccagatggccgtctt 173
Score = 63.9 bits (32), Expect = 1e-008
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 610 tagttgtagttgtaggagagctggatgggcccgcggccgaagta 653
||||||||||||| |||||||||||| |||||||||||| ||||
Sbjct: 93 tagttgtagttgtgggagagctggatcggcccgcggccgtagta 50
>gb|BM371924.2|BM371924 EBma08_SQ004_G15_R maternal, 28 DPA, no treatment, cv Optic, EBma08
Hordeum vulgare subsp. vulgare cDNA clone
EBma08_SQ004_G15 5', mRNA sequence
Length = 552
Score = 89.7 bits (45), Expect = 2e-016
Identities = 51/53 (96%)
Strand = Plus / Minus
Query: 472 tggcacgacggcttgggcggctgcgccgtcatccagaaccagatggccgtctt 524
|||| ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 tggctcgatggcttgggcggctgcgccgtcatccagaaccagatggccgtctt 425
Score = 83.8 bits (42), Expect = 1e-014
Identities = 171/214 (79%)
Strand = Plus / Minus
Query: 702 gcagtagtcggcggtggcgccgttctcctccttgtagcagtagccccaggtgaaggcgcc 761
||||||||||| || |||||| |||| |||| ||||||||||||||| |||||| ||
Sbjct: 262 gcagtagtcggaggaggcgccacgttcctgcttgaagcagtagccccaggcgaaggcccc 203
Query: 762 gtcgggcgcgttcggccagccgcccgtggtctcatgccccgtctgccccaagaacgcggc 821
||| || || ||| ||| ||||| |||||||| || ||||| | | ||| |||||
Sbjct: 202 gtccggtgcagtcgcccacccgccggtggtctcgtgggaggtctgtgctaggaaggcggc 143
Query: 822 gagctcgcgcttctggacctccgtgctgcccgtggtgccgaagccccggaacgcgtccgc 881
| ||||||||||||| | || | |||||| ||||||||||||||| |||| ||| | ||
Sbjct: 142 cacctcgcgcttctgggcgtcggcgctgccggtggtgccgaagcccgggaaggcggctgc 83
Query: 882 cgccgtgatgaaggcgtcgtacgtgtagaagccc 915
|| | || |||||||||||| ||||||||||||
Sbjct: 82 ggcggcgacgaaggcgtcgtaggtgtagaagccc 49
Score = 63.9 bits (32), Expect = 1e-008
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 610 tagttgtagttgtaggagagctggatgggcccgcggccgaagta 653
||||||||||||| |||||||||||| |||||||||||| ||||
Sbjct: 345 tagttgtagttgtgggagagctggatcggcccgcggccgtagta 302
>gb|BQ755807.1|BQ755807 EBed07_SQ003_N15_R endosperm, 28 DPA, no treatment, cv Optic,
EBed07 Hordeum vulgare subsp. vulgare cDNA clone
EBed07_SQ003_N15 5', mRNA sequence
Length = 688
Score = 89.7 bits (45), Expect = 2e-016
Identities = 51/53 (96%)
Strand = Plus / Minus
Query: 472 tggcacgacggcttgggcggctgcgccgtcatccagaaccagatggccgtctt 524
|||| ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 tggctcgatggcttgggcggctgcgccgtcatccagaaccagatggccgtctt 358
Score = 63.9 bits (32), Expect = 1e-008
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 610 tagttgtagttgtaggagagctggatgggcccgcggccgaagta 653
||||||||||||| |||||||||||| |||||||||||| ||||
Sbjct: 278 tagttgtagttgtgggagagctggatcggcccgcggccgtagta 235
Score = 61.9 bits (31), Expect = 4e-008
Identities = 136/171 (79%)
Strand = Plus / Minus
Query: 702 gcagtagtcggcggtggcgccgttctcctccttgtagcagtagccccaggtgaaggcgcc 761
||||||||||| || |||||| |||| |||| ||||||||||||||| |||||| ||
Sbjct: 195 gcagtagtcggaggaggcgccacgttcctgcttgaagcagtagccccaggcgaaggcccc 136
Query: 762 gtcgggcgcgttcggccagccgcccgtggtctcatgccccgtctgccccaagaacgcggc 821
||| || || ||| ||| ||||| |||||||| || ||||| | | ||| |||||
Sbjct: 135 gtccggtgcagtcgcccacccgccggtggtctcgtgggaggtctgtgctaggaaggcggc 76
Query: 822 gagctcgcgcttctggacctccgtgctgcccgtggtgccgaagccccggaa 872
| ||||||||||||| | || | |||||| ||||||||||||||| ||||
Sbjct: 75 cacctcgcgcttctgggcgtcggcgctgccggtggtgccgaagcccgggaa 25
Score = 42.1 bits (21), Expect = 0.036
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 378 gccgttgatgatgttggtgat 398
|||||||||||||||||||||
Sbjct: 504 gccgttgatgatgttggtgat 484
>gb|BU984341.1|BU984341 HF03K16r HF Hordeum vulgare subsp. vulgare cDNA clone HF03K16
5-PRIME, mRNA sequence
Length = 488
Score = 89.7 bits (45), Expect = 2e-016
Identities = 51/53 (96%)
Strand = Plus / Minus
Query: 472 tggcacgacggcttgggcggctgcgccgtcatccagaaccagatggccgtctt 524
|||| ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 tggctcgatggcttgggcggctgcgccgtcatccagaaccagatggccgtctt 73
Score = 42.1 bits (21), Expect = 0.036
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 378 gccgttgatgatgttggtgat 398
|||||||||||||||||||||
Sbjct: 219 gccgttgatgatgttggtgat 199
>gb|BU988906.1|BU988906 HF19B23r HF Hordeum vulgare subsp. vulgare cDNA clone HF19B23
5-PRIME, mRNA sequence
Length = 467
Score = 89.7 bits (45), Expect = 2e-016
Identities = 51/53 (96%)
Strand = Plus / Minus
Query: 472 tggcacgacggcttgggcggctgcgccgtcatccagaaccagatggccgtctt 524
|||| ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 tggctcgatggcttgggcggctgcgccgtcatccagaaccagatggccgtctt 48
Score = 42.1 bits (21), Expect = 0.036
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 378 gccgttgatgatgttggtgat 398
|||||||||||||||||||||
Sbjct: 194 gccgttgatgatgttggtgat 174
>gb|CA012187.1|CA012187 HT04K16r HT Hordeum vulgare subsp. vulgare cDNA clone HT04K16
5-PRIME, mRNA sequence
Length = 447
Score = 89.7 bits (45), Expect = 2e-016
Identities = 51/53 (96%)
Strand = Plus / Minus
Query: 472 tggcacgacggcttgggcggctgcgccgtcatccagaaccagatggccgtctt 524
|||| ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 tggctcgatggcttgggcggctgcgccgtcatccagaaccagatggccgtctt 223
Score = 63.9 bits (32), Expect = 1e-008
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 610 tagttgtagttgtaggagagctggatgggcccgcggccgaagta 653
||||||||||||| |||||||||||| |||||||||||| ||||
Sbjct: 143 tagttgtagttgtgggagagctggatcggcccgcggccgtagta 100
Score = 42.1 bits (21), Expect = 0.036
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 378 gccgttgatgatgttggtgat 398
|||||||||||||||||||||
Sbjct: 369 gccgttgatgatgttggtgat 349
>gb|CA013184.1|CA013184 HT07K10r HT Hordeum vulgare subsp. vulgare cDNA clone HT07K10
5-PRIME, mRNA sequence
Length = 572
Score = 89.7 bits (45), Expect = 2e-016
Identities = 51/53 (96%)
Strand = Plus / Minus
Query: 472 tggcacgacggcttgggcggctgcgccgtcatccagaaccagatggccgtctt 524
|||| ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 tggctcgatggcttgggcggctgcgccgtcatccagaaccagatggccgtctt 70
Score = 42.1 bits (21), Expect = 0.036
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 378 gccgttgatgatgttggtgat 398
|||||||||||||||||||||
Sbjct: 216 gccgttgatgatgttggtgat 196
>gb|CA013444.1|CA013444 HT08H14r HT Hordeum vulgare subsp. vulgare cDNA clone HT08H14
5-PRIME, mRNA sequence
Length = 494
Score = 89.7 bits (45), Expect = 2e-016
Identities = 51/53 (96%)
Strand = Plus / Minus
Query: 472 tggcacgacggcttgggcggctgcgccgtcatccagaaccagatggccgtctt 524
|||| ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tggctcgatggcttgggcggctgcgccgtcatccagaaccagatggccgtctt 69
Score = 42.1 bits (21), Expect = 0.036
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 378 gccgttgatgatgttggtgat 398
|||||||||||||||||||||
Sbjct: 215 gccgttgatgatgttggtgat 195
>gb|CA014196.1|CA014196 HT10K16r HT Hordeum vulgare subsp. vulgare cDNA clone HT10K16
5-PRIME, mRNA sequence
Length = 670
Score = 89.7 bits (45), Expect = 2e-016
Identities = 51/53 (96%)
Strand = Plus / Minus
Query: 472 tggcacgacggcttgggcggctgcgccgtcatccagaaccagatggccgtctt 524
|||| ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 tggctcgatggcttgggcggctgcgccgtcatccagaaccagatggccgtctt 591
Score = 83.8 bits (42), Expect = 1e-014
Identities = 171/214 (79%)
Strand = Plus / Minus
Query: 702 gcagtagtcggcggtggcgccgttctcctccttgtagcagtagccccaggtgaaggcgcc 761
||||||||||| || |||||| |||| |||| ||||||||||||||| |||||| ||
Sbjct: 428 gcagtagtcggaggaggcgccacgttcctgcttgaagcagtagccccaggcgaaggcccc 369
Query: 762 gtcgggcgcgttcggccagccgcccgtggtctcatgccccgtctgccccaagaacgcggc 821
||| || || ||| ||| ||||| |||||||| || ||||| | | ||| |||||
Sbjct: 368 gtccggtgcagtcgcccacccgccggtggtctcgtgggaggtctgtgctaggaaggcggc 309
Query: 822 gagctcgcgcttctggacctccgtgctgcccgtggtgccgaagccccggaacgcgtccgc 881
| ||||||||||||| | || | |||||| ||||||||||||||| |||| ||| | ||
Sbjct: 308 cacctcgcgcttctgggcgtcggcgctgccggtggtgccgaagcccgggaaggcggctgc 249
Query: 882 cgccgtgatgaaggcgtcgtacgtgtagaagccc 915
|| | || |||||||||||| ||||||||||||
Sbjct: 248 ggcggcgacgaaggcgtcgtaggtgtagaagccc 215
Score = 63.9 bits (32), Expect = 1e-008
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 610 tagttgtagttgtaggagagctggatgggcccgcggccgaagta 653
||||||||||||| |||||||||||| |||||||||||| ||||
Sbjct: 511 tagttgtagttgtgggagagctggatcggcccgcggccgtagta 468
>gb|BG417744.1|BG417744 HVSMEk0019F09f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0019F09f, mRNA sequence
Length = 436
Score = 87.7 bits (44), Expect = 7e-016
Identities = 44/44 (100%)
Strand = Plus / Minus
Query: 478 gacggcttgggcggctgcgccgtcatccagaaccagatggccgt 521
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 gacggcttgggcggctgcgccgtcatccagaaccagatggccgt 189
Score = 71.9 bits (36), Expect = 4e-011
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 610 tagttgtagttgtaggagagctggatgggcccgcggccgaagta 653
||||||||||||| ||||||||||||||||||||||||| ||||
Sbjct: 106 tagttgtagttgttggagagctggatgggcccgcggccgtagta 63
>gb|BI947731.1|BI947731 HVSMEl0006K11f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0006K11f, mRNA sequence
Length = 1028
Score = 83.8 bits (42), Expect = 1e-014
Identities = 57/62 (91%)
Strand = Plus / Minus
Query: 601 gccggcccgtagttgtagttgtaggagagctggatgggcccgcggccgaagtacttcttg 660
||||||| |||||||||||||| ||||| ||||||||||||||| || ||||||||||||
Sbjct: 210 gccggccagtagttgtagttgtgggagatctggatgggcccgcgccctaagtacttcttg 151
Query: 661 cc 662
||
Sbjct: 150 cc 149
Score = 73.8 bits (37), Expect = 1e-011
Identities = 79/93 (84%)
Strand = Plus / Minus
Query: 702 gcagtagtcggcggtggcgccgttctcctccttgtagcagtagccccaggtgaaggcgcc 761
||||||||||| |||||||||| ||||| ||| ||||||||||||||| | |||| |
Sbjct: 118 gcagtagtcggaggtggcgccgcgctcctggttgaagcagtagccccaggagtaggcctc 59
Query: 762 gtcgggcgcgttcggccagccgcccgtggtctc 794
||||||||| ||||||| ||||| ||||||||
Sbjct: 58 gtcgggcgccgtcggccacccgccggtggtctc 26
Score = 44.1 bits (22), Expect = 0.009
Identities = 67/82 (81%)
Strand = Plus / Minus
Query: 493 tgcgccgtcatccagaaccagatggccgtcttgaaggagatgacggcgtccgacgccacc 552
|||| ||||||||||||||| | |||||||| ||||| | | ||||||| ||||||
Sbjct: 312 tgcggcgtcatccagaaccacaacgccgtcttaaaggacacggtcgcgtccgtcgccacg 253
Query: 553 agctccgggttgctcagcaggt 574
|| ||||||||| | |||||||
Sbjct: 252 aggtccgggttgttgagcaggt 231
>gb|BG366386.2|BG366386 HVSMEi0006N24f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0006N24f, mRNA sequence
Length = 710
Score = 83.8 bits (42), Expect = 1e-014
Identities = 52/54 (96%), Gaps = 1/54 (1%)
Strand = Plus / Minus
Query: 472 tggcacgacggctt-gggcggctgcgccgtcatccagaaccagatggccgtctt 524
|||| ||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 632 tggctcgacggctttgggcggctgcgccgtcatccagaaccagatggccgtctt 579
Score = 77.8 bits (39), Expect = 7e-013
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 610 tagttgtagttgtaggagagctggatgggcccgcggccgaagtacttcttgccggcgacg 669
||||||||||||| ||||||||||||||||||||||||| |||| ||| |||| | ||
Sbjct: 499 tagttgtagttgtgggagagctggatgggcccgcggccgtagtagcgcttcccgggggcg 440
Query: 670 cacggccactg 680
|||||||||||
Sbjct: 439 cacggccactg 429
Score = 75.8 bits (38), Expect = 3e-012
Identities = 170/214 (79%)
Strand = Plus / Minus
Query: 702 gcagtagtcggcggtggcgccgttctcctccttgtagcagtagccccaggtgaaggcgcc 761
||||||||||| || ||||||| |||| |||| ||||||||||||||| |||||| ||
Sbjct: 416 gcagtagtcggaggaggcgccgcgttcctgcttgaagcagtagccccaggcgaaggcccc 357
Query: 762 gtcgggcgcgttcggccagccgcccgtggtctcatgccccgtctgccccaagaacgcggc 821
||| || || ||| ||| ||||| |||||||| || ||||| ||| ||| |||||
Sbjct: 356 gtccggtgccgtcgcccatccgccggtggtctcgtgggaggtctgggccaggaaggcggc 297
Query: 822 gagctcgcgcttctggacctccgtgctgcccgtggtgccgaagccccggaacgcgtccgc 881
| ||||||||||||| | || | |||||| ||| ||||||||||| |||| || ||
Sbjct: 296 cacctcgcgcttctgggcgtcggcgctgccggtgctgccgaagcccgggaaggcagatgc 237
Query: 882 cgccgtgatgaaggcgtcgtacgtgtagaagccc 915
|| | || |||||||||||| ||||||||||||
Sbjct: 236 ggcggcgacgaaggcgtcgtaggtgtagaagccc 203
>gb|BI780179.2|BI780179 EBma08_SQ001_K01_R maternal, 28 DPA, no treatment, cv Optic, EBma08
Hordeum vulgare subsp. vulgare cDNA clone
EBma08_SQ001_K01 5', mRNA sequence
Length = 604
Score = 83.8 bits (42), Expect = 1e-014
Identities = 171/214 (79%)
Strand = Plus / Minus
Query: 702 gcagtagtcggcggtggcgccgttctcctccttgtagcagtagccccaggtgaaggcgcc 761
||||||||||| || |||||| |||| |||| ||||||||||||||| |||||| ||
Sbjct: 417 gcagtagtcggaggaggcgccacgttcctgcttgaagcagtagccccaggcgaaggcccc 358
Query: 762 gtcgggcgcgttcggccagccgcccgtggtctcatgccccgtctgccccaagaacgcggc 821
||| || || ||| ||| ||||| |||||||| || ||||| | | ||| |||||
Sbjct: 357 gtccggtgcagtcgcccacccgccggtggtctcgtgggaggtctgtgctaggaaggcggc 298
Query: 822 gagctcgcgcttctggacctccgtgctgcccgtggtgccgaagccccggaacgcgtccgc 881
| ||||||||||||| | || | |||||| ||||||||||||||| |||| ||| | ||
Sbjct: 297 cacctcgcgcttctgggcgtcggcgctgccggtggtgccgaagcccgggaaggcggctgc 238
Query: 882 cgccgtgatgaaggcgtcgtacgtgtagaagccc 915
|| | || |||||||||||| ||||||||||||
Sbjct: 237 ggcggcgacgaaggcgtcgtaggtgtagaagccc 204
Score = 56.0 bits (28), Expect = 2e-006
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 610 tagttgtagttgtaggagagctggatgggcccgcggccgaagta 653
|||| |||||||| |||||||||||| |||||||||||| ||||
Sbjct: 500 tagtcgtagttgtgggagagctggatcggcccgcggccgtagta 457
Score = 50.1 bits (25), Expect = 1e-004
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 500 tcatccagaaccagatggccgtctt 524
|||||||||||||||||||||||||
Sbjct: 604 tcatccagaaccagatggccgtctt 580
>gb|BQ758640.1|BQ758640 EBma07_SQ002_J07_R maternal, 21 DPA, no treatment, cv Optic, EBma07
Hordeum vulgare subsp. vulgare cDNA clone
EBma07_SQ002_J07 5', mRNA sequence
Length = 559
Score = 83.8 bits (42), Expect = 1e-014
Identities = 171/214 (79%)
Strand = Plus / Minus
Query: 702 gcagtagtcggcggtggcgccgttctcctccttgtagcagtagccccaggtgaaggcgcc 761
||||||||||| || |||||| |||| |||| ||||||||||||||| |||||| ||
Sbjct: 417 gcagtagtcggaggaggcgccacgttcctgcttgaagcagtagccccaggcgaaggcccc 358
Query: 762 gtcgggcgcgttcggccagccgcccgtggtctcatgccccgtctgccccaagaacgcggc 821
||| || || ||| ||| ||||| |||||||| || ||||| | | ||| |||||
Sbjct: 357 gtccggtgcagtcgcccacccgccggtggtctcgtgggaggtctgtgctaggaaggcggc 298
Query: 822 gagctcgcgcttctggacctccgtgctgcccgtggtgccgaagccccggaacgcgtccgc 881
| ||||||||||||| | || | |||||| ||||||||||||||| |||| ||| | ||
Sbjct: 297 cacctcgcgcttctgggcgtcggcgctgccggtggtgccgaagcccgggaaggcggctgc 238
Query: 882 cgccgtgatgaaggcgtcgtacgtgtagaagccc 915
|| | || |||||||||||| ||||||||||||
Sbjct: 237 ggcggcgacgaaggcgtcgtaggtgtagaagccc 204
Score = 63.9 bits (32), Expect = 1e-008
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 610 tagttgtagttgtaggagagctggatgggcccgcggccgaagta 653
||||||||||||| |||||||||||| |||||||||||| ||||
Sbjct: 501 tagttgtagttgtgggagagctggatcggcccgcggccgtagta 458
>gb|CA012410.1|CA012410 HT05F17r HT Hordeum vulgare subsp. vulgare cDNA clone HT05F17
5-PRIME, mRNA sequence
Length = 487
Score = 83.8 bits (42), Expect = 1e-014
Identities = 171/214 (79%)
Strand = Plus / Minus
Query: 702 gcagtagtcggcggtggcgccgttctcctccttgtagcagtagccccaggtgaaggcgcc 761
||||||||||| || |||||| |||| |||| ||||||||||||||| |||||| ||
Sbjct: 424 gcagtagtcggaggaggcgccacgttcctgcttgaagcagtagccccaggcgaaggcccc 365
Query: 762 gtcgggcgcgttcggccagccgcccgtggtctcatgccccgtctgccccaagaacgcggc 821
||| || || ||| ||| ||||| |||||||| || ||||| | | ||| |||||
Sbjct: 364 gtccggtgcagtcgcccacccgccggtggtctcgtgggaggtctgtgctaggaaggcggc 305
Query: 822 gagctcgcgcttctggacctccgtgctgcccgtggtgccgaagccccggaacgcgtccgc 881
| ||||||||||||| | || | |||||| ||||||||||||||| |||| ||| | ||
Sbjct: 304 cacctcgcgcttctgggcgtcggcgctgccggtggtgccgaagcccgggaaggcggctgc 245
Query: 882 cgccgtgatgaaggcgtcgtacgtgtagaagccc 915
|| | || |||||||||||| ||||||||||||
Sbjct: 244 ggcggcgacgaaggcgtcgtaggtgtagaagccc 211
>gb|CA014966.1|CA014966 HT12N24r HT Hordeum vulgare subsp. vulgare cDNA clone HT12N24
5-PRIME, mRNA sequence
Length = 556
Score = 83.8 bits (42), Expect = 1e-014
Identities = 171/214 (79%)
Strand = Plus / Minus
Query: 702 gcagtagtcggcggtggcgccgttctcctccttgtagcagtagccccaggtgaaggcgcc 761
||||||||||| || |||||| |||| |||| ||||||||||||||| |||||| ||
Sbjct: 399 gcagtagtcggaggaggcgccacgttcctgcttgaagcagtagccccaggcgaaggcccc 340
Query: 762 gtcgggcgcgttcggccagccgcccgtggtctcatgccccgtctgccccaagaacgcggc 821
||| || || ||| ||| ||||| |||||||| || ||||| | | ||| |||||
Sbjct: 339 gtccggtgcagtcgcccacccgccggtggtctcgtgggaggtctgtgctaggaaggcggc 280
Query: 822 gagctcgcgcttctggacctccgtgctgcccgtggtgccgaagccccggaacgcgtccgc 881
| ||||||||||||| | || | |||||| ||||||||||||||| |||| ||| | ||
Sbjct: 279 cacctcgcgcttctgggcgtcggcgctgccggtggtgccgaagcccgggaaggcggctgc 220
Query: 882 cgccgtgatgaaggcgtcgtacgtgtagaagccc 915
|| | || |||||||||||| ||||||||||||
Sbjct: 219 ggcggcgacgaaggcgtcgtaggtgtagaagccc 186
Score = 63.9 bits (32), Expect = 1e-008
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 610 tagttgtagttgtaggagagctggatgggcccgcggccgaagta 653
||||||||||||| |||||||||||| |||||||||||| ||||
Sbjct: 482 tagttgtagttgtgggagagctggatcggcccgcggccgtagta 439
>gb|CA015187.1|CA015187 HT13I21r HT Hordeum vulgare subsp. vulgare cDNA clone HT13I21
5-PRIME, mRNA sequence
Length = 535
Score = 83.8 bits (42), Expect = 1e-014
Identities = 171/214 (79%)
Strand = Plus / Minus
Query: 702 gcagtagtcggcggtggcgccgttctcctccttgtagcagtagccccaggtgaaggcgcc 761
||||||||||| || |||||| |||| |||| ||||||||||||||| |||||| ||
Sbjct: 417 gcagtagtcggaggaggcgccacgttcctgcttgaagcagtagccccaggcgaaggcccc 358
Query: 762 gtcgggcgcgttcggccagccgcccgtggtctcatgccccgtctgccccaagaacgcggc 821
||| || || ||| ||| ||||| |||||||| || ||||| | | ||| |||||
Sbjct: 357 gtccggtgcagtcgcccacccgccggtggtctcgtgggaggtctgtgctaggaaggcggc 298
Query: 822 gagctcgcgcttctggacctccgtgctgcccgtggtgccgaagccccggaacgcgtccgc 881
| ||||||||||||| | || | |||||| ||||||||||||||| |||| ||| | ||
Sbjct: 297 cacctcgcgcttctgggcgtcggcgctgccggtggtgccgaagcccgggaaggcggctgc 238
Query: 882 cgccgtgatgaaggcgtcgtacgtgtagaagccc 915
|| | || |||||||||||| ||||||||||||
Sbjct: 237 ggcggcgacgaaggcgtcgtaggtgtagaagccc 204
Score = 63.9 bits (32), Expect = 1e-008
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 610 tagttgtagttgtaggagagctggatgggcccgcggccgaagta 653
||||||||||||| |||||||||||| |||||||||||| ||||
Sbjct: 500 tagttgtagttgtgggagagctggatcggcccgcggccgtagta 457
>gb|BE411224.1|BE411224 ISC003.D02F990524 ITEC ISC Barley Leaf Library Hordeum vulgare
subsp. vulgare cDNA clone ISC003.D02, mRNA sequence
Length = 489
Score = 81.8 bits (41), Expect = 4e-014
Identities = 97/113 (85%), Gaps = 2/113 (1%)
Strand = Plus / Minus
Query: 465 cacgtcgtggcacgacggcttgggcggctgcgccgtcatccagaaccagatggccgtctt 524
|||||||||||||||||||||| | ||||| ||||||||||||||| || ||||||||
Sbjct: 380 cacgtcgtggcacgacggcttgttggactgcgtcgtcatccagaaccaaatcgccgtctt 321
Query: 525 gaaggaga-tgacggcgtccgacgccaccagctccgggttgctcagcaggtcc 576
||| | | | ||| ||||||||||||||| ||||||||| |||||||||||
Sbjct: 320 gaacgccaccgtcgg-gtccgacgccaccaggtccgggttgttcagcaggtcc 269
Score = 75.8 bits (38), Expect = 3e-012
Identities = 67/77 (87%)
Strand = Plus / Minus
Query: 601 gccggcccgtagttgtagttgtaggagagctggatgggcccgcggccgaagtacttcttg 660
||||| |||||||||||||||| || |||||||||||| |||||||| |||||| ||||
Sbjct: 250 gccggtccgtagttgtagttgtgggtgagctggatggggccgcggccatagtactgcttg 191
Query: 661 ccggcgacgcacggcca 677
|||| ||||||||||
Sbjct: 190 ccggncgcgcacggcca 174
Score = 73.8 bits (37), Expect = 1e-011
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 726 ctcctccttgtagcagtagccccaggtgaaggcgccgtcgggcgcgttcggccagccgcc 785
||||| |||| ||||||||||||| | ||||| ||||||||||||| | |||||||||||
Sbjct: 134 ctcctgcttgaagcagtagccccacgagaaggggccgtcgggcgcggtaggccagccgcc 75
Query: 786 cgtggtctc 794
||||||||
Sbjct: 74 ggtggtctc 66
>gb|BE411672.1|BE411672 ISC008.A09F990802 ITEC ISC Barley Leaf Library Hordeum vulgare
subsp. vulgare cDNA clone ISC008.A09, mRNA sequence
Length = 486
Score = 81.8 bits (41), Expect = 4e-014
Identities = 97/113 (85%), Gaps = 2/113 (1%)
Strand = Plus / Minus
Query: 465 cacgtcgtggcacgacggcttgggcggctgcgccgtcatccagaaccagatggccgtctt 524
|||||||||||||||||||||| | ||||| ||||||||||||||| || ||||||||
Sbjct: 148 cacgtcgtggcacgacggcttgttggactgcgtcgtcatccagaaccaaatcgccgtctt 89
Query: 525 gaaggaga-tgacggcgtccgacgccaccagctccgggttgctcagcaggtcc 576
||| | | | ||| ||||||||||||||| ||||||||| |||||||||||
Sbjct: 88 gaacgccaccgtcgg-gtccgacgccaccaggtccgggttgttcagcaggtcc 37
>gb|BG369588.2|BG369588 HVSMEi0025B12f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0025B12f, mRNA sequence
Length = 691
Score = 81.8 bits (41), Expect = 4e-014
Identities = 50/53 (94%)
Strand = Plus / Minus
Query: 472 tggcacgacggcttgggcggctgcgccgtcatccagaaccagatggccgtctt 524
|||| |||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 628 tggctcgacggtttgggcggatgcgccgtcatccagaaccagatggccgtctt 576
Score = 77.8 bits (39), Expect = 7e-013
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 610 tagttgtagttgtaggagagctggatgggcccgcggccgaagtacttcttgccggcgacg 669
||||||||||||| ||||||||||||||||||||||||| |||| ||| |||| | ||
Sbjct: 496 tagttgtagttgtgggagagctggatgggcccgcggccgtagtagcgcttcccgggggcg 437
Query: 670 cacggccactg 680
|||||||||||
Sbjct: 436 cacggccactg 426
Score = 52.0 bits (26), Expect = 4e-005
Identities = 167/214 (78%)
Strand = Plus / Minus
Query: 702 gcagtagtcggcggtggcgccgttctcctccttgtagcagtagccccaggtgaaggcgcc 761
||||||||||| | ||||||| |||| |||| ||||||||||||||| |||||| ||
Sbjct: 413 gcagtagtcggagaaggcgccgcgttcctgcttgaagcagtagccccaggcgaaggcccc 354
Query: 762 gtcgggcgcgttcggccagccgcccgtggtctcatgccccgtctgccccaagaacgcggc 821
||| || || ||| ||| ||||| |||||||| || ||||| ||| ||| |||||
Sbjct: 353 gtccggtgccgtcgcccatccgccggtggtctcgtgggaggtctgggccaggaaggcggc 294
Query: 822 gagctcgcgcttctggacctccgtgctgcccgtggtgccgaagccccggaacgcgtccgc 881
| ||||||||| ||| | || | |||||| ||| |||||||||| |||| || ||
Sbjct: 293 cacctcgcgcttatgggcgtcggcgctgccggtgctgccgaagcctgggaaggcagatgc 234
Query: 882 cgccgtgatgaaggcgtcgtacgtgtagaagccc 915
|| | || |||||||||||| ||||||||||||
Sbjct: 233 ggcggcgacgaaggcgtcgtaggtgtagaagccc 200
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 147,646
Number of Sequences: 312970
Number of extensions: 147646
Number of successful extensions: 45049
Number of sequences better than 0.5: 280
Number of HSP's better than 0.5 without gapping: 269
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 43888
Number of HSP's gapped (non-prelim): 1041
length of query: 1043
length of database: 175,134,539
effective HSP length: 19
effective length of query: 1024
effective length of database: 169,188,109
effective search space: 173248623616
effective search space used: 173248623616
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)