BLASTN 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 3115474.2.1
         (798 letters)

Database: Hordeum_nucl_with_EST.fasta 
           312,970 sequences; 175,134,539 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|BJ469841.1|BJ469841  BJ469841 K. Sato unpublished cDNA li...   236   9e-061
gb|BJ473254.1|BJ473254  BJ473254 K. Sato unpublished cDNA li...   236   9e-061
gb|CA028449.1|CA028449  HZ62A02r HZ Hordeum vulgare subsp. v...   234   4e-060
gb|AV926843.1|AV926843  AV926843 K. Sato unpublished cDNA li...   226   9e-058
gb|BM372123.2|BM372123  EBro03_SQ004_B12_R root, 3 week, wat...   226   9e-058
gb|CA015467.1|CA015467  HT14G12r HT Hordeum vulgare subsp. v...   226   9e-058
gb|AV923902.1|AV923902  AV923902 K. Sato unpublished cDNA li...   214   3e-054
gb|BE215258.1|BE215258  HV_CEb0006E21f Hordeum vulgare seedl...   109   1e-022
gb|AV931736.1|AV931736  AV931736 K. Sato unpublished cDNA li...    88   5e-016
gb|AV931964.1|AV931964  AV931964 K. Sato unpublished cDNA li...    88   5e-016
gb|AV929045.1|AV929045  AV929045 K. Sato unpublished cDNA li...    84   8e-015
gb|BJ476928.1|BJ476928  BJ476928 K. Sato unpublished cDNA li...    84   8e-015
gb|CA007616.1|CA007616  HU08I04r HU Hordeum vulgare subsp. v...    40   0.11 
>gb|BJ469841.1|BJ469841 BJ469841 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
           heading stage top three leaves Hordeum vulgare subsp.
           vulgare cDNA clone baal37n04 5', mRNA sequence
          Length = 655

 Score =  236 bits (119), Expect = 9e-061
 Identities = 338/411 (82%)
 Strand = Plus / Minus

                                                                       
Query: 1   acaattgctcgccctcgaatggcttggaaacataaccatccatttcagatttcaagcatt 60
           |||| ||||| || || ||||||||||| ||||| |||||||||||| ||||||| || |
Sbjct: 452 acaactgctccccttcaaatggcttggagacatagccatccatttcacatttcaaacagt 393

                                                                       
Query: 61  gttcatgtgtcgcctggataacatctgctgtcatggctaatattggagttcgccactgcc 120
           | |||| ||| ||||||||||| ||||||||||| || | ||| ||||||||||||  ||
Sbjct: 392 gctcatatgttgcctggataacgtctgctgtcattgccagtatcggagttcgccacctcc 333

                                                                       
Query: 121 gaacccctacgcattctggtggggcttctccacgttctatttgctcatttagatctcttt 180
            |||     | ||||||||||| || ||||| |||||||   |||||||||| |||||||
Sbjct: 332 taacgttagcacattctggtggagcctctccgcgttctacccgctcatttagctctcttt 273

                                                                       
Query: 181 ccatcactctaatcctttttgtggcttcaaatccatccatttcaggcatctgtatgtcca 240
           |||||| ||| || || || ||||||||||| ||||||||||| ||||| ||||||||||
Sbjct: 272 ccatcattctgattctcttggtggcttcaaacccatccatttctggcatttgtatgtcca 213

                                                                       
Query: 241 tgaaacaagcatcaaaattgtgaggaggtttcagcagtgtgattgcttccttcccactgt 300
           ||||||||||||||||| ||||||| ||||| |||| ||  ||||||| |||||||||||
Sbjct: 212 tgaaacaagcatcaaaactgtgaggtggttttagcaatgcaattgctttcttcccactgt 153

                                                                       
Query: 301 cagcacaagttacttccgcgccatatttctttagagcgcctgcagcaaccttgagattta 360
           | || ||| ||||||| || || || ||||| ||||| || ||||| || || || || |
Sbjct: 152 ctgcgcaaattacttctgccccgtacttcttgagagcaccagcagccactttaaggttca 93

                                                              
Query: 361 caatattatcatcaaccactatgattcgcttcttgtgaagaaggctgccca 411
           ||   || || |||||||| ||||||  | |||||||||||||||| ||||
Sbjct: 92  cagcgttgtcgtcaaccacaatgattttcctcttgtgaagaaggctaccca 42
>gb|BJ473254.1|BJ473254 BJ473254 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
           heading stage top three leaves Hordeum vulgare subsp.
           vulgare cDNA clone baal41f18 5', mRNA sequence
          Length = 621

 Score =  236 bits (119), Expect = 9e-061
 Identities = 338/411 (82%)
 Strand = Plus / Minus

                                                                       
Query: 1   acaattgctcgccctcgaatggcttggaaacataaccatccatttcagatttcaagcatt 60
           |||| ||||| || || ||||||||||| ||||| |||||||||||| ||||||| || |
Sbjct: 432 acaactgctccccttcaaatggcttggagacatagccatccatttcacatttcaaacagt 373

                                                                       
Query: 61  gttcatgtgtcgcctggataacatctgctgtcatggctaatattggagttcgccactgcc 120
           | |||| ||| ||||||||||| ||||||||||| || | ||| ||||||||||||  ||
Sbjct: 372 gctcatatgttgcctggataacgtctgctgtcattgccagtatcggagttcgccacctcc 313

                                                                       
Query: 121 gaacccctacgcattctggtggggcttctccacgttctatttgctcatttagatctcttt 180
            |||     | ||||||||||| || ||||| |||||||   |||||||||| |||||||
Sbjct: 312 taacgttagcacattctggtggagcctctccgcgttctacccgctcatttagctctcttt 253

                                                                       
Query: 181 ccatcactctaatcctttttgtggcttcaaatccatccatttcaggcatctgtatgtcca 240
           |||||| ||| || || || ||||||||||| ||||||||||| ||||| ||||||||||
Sbjct: 252 ccatcattctgattctcttggtggcttcaaacccatccatttctggcatttgtatgtcca 193

                                                                       
Query: 241 tgaaacaagcatcaaaattgtgaggaggtttcagcagtgtgattgcttccttcccactgt 300
           ||||||||||||||||| ||||||| ||||| |||| ||  ||||||| |||||||||||
Sbjct: 192 tgaaacaagcatcaaaactgtgaggtggttttagcaatgcaattgctttcttcccactgt 133

                                                                       
Query: 301 cagcacaagttacttccgcgccatatttctttagagcgcctgcagcaaccttgagattta 360
           | || ||| ||||||| || || || ||||| ||||| || ||||| || || || || |
Sbjct: 132 ctgcgcaaattacttctgccccgtacttcttgagagcaccagcagccactttaaggttca 73

                                                              
Query: 361 caatattatcatcaaccactatgattcgcttcttgtgaagaaggctgccca 411
           ||   || || |||||||| ||||||  | |||||||||||||||| ||||
Sbjct: 72  cagcgttgtcgtcaaccacaatgattttcctcttgtgaagaaggctaccca 22
>gb|CA028449.1|CA028449 HZ62A02r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ62A02
           5-PRIME, mRNA sequence
          Length = 629

 Score =  234 bits (118), Expect = 4e-060
 Identities = 325/394 (82%)
 Strand = Plus / Minus

                                                                       
Query: 18  aatggcttggaaacataaccatccatttcagatttcaagcattgttcatgtgtcgcctgg 77
           ||||||||||| ||||| |||||||||||| ||||||| || || |||| ||| ||||||
Sbjct: 616 aatggcttggagacatagccatccatttcacatttcaaacagtgctcatatgttgcctgg 557

                                                                       
Query: 78  ataacatctgctgtcatggctaatattggagttcgccactgccgaacccctacgcattct 137
           ||||| ||||||||||| || | ||| ||||||||||||  || |||     | ||||||
Sbjct: 556 ataacgtctgctgtcattgccagtatcggagttcgccacctcctaacgttagcacattct 497

                                                                       
Query: 138 ggtggggcttctccacgttctatttgctcatttagatctctttccatcactctaatcctt 197
           ||||| || ||||| |||||||   |||||||||| ||||||||||||| ||| || || 
Sbjct: 496 ggtggagcctctccgcgttctacccgctcatttagctctctttccatcattctgattctc 437

                                                                       
Query: 198 tttgtggcttcaaatccatccatttcaggcatctgtatgtccatgaaacaagcatcaaaa 257
           || ||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 436 ttggtggcttcaaacccatccatttctggcatttgtatgtccatgaaacaagcatcaaaa 377

                                                                       
Query: 258 ttgtgaggaggtttcagcagtgtgattgcttccttcccactgtcagcacaagttacttcc 317
            ||||||| ||||| |||| ||  ||||||| |||||||||||| || ||| ||||||| 
Sbjct: 376 ctgtgaggtggttttagcaatgcaattgctttcttcccactgtctgcgcaaattacttct 317

                                                                       
Query: 318 gcgccatatttctttagagcgcctgcagcaaccttgagatttacaatattatcatcaacc 377
           || || || ||||| ||||| || ||||| || || || || |||   || || ||||||
Sbjct: 316 gccccgtacttcttgagagcaccagcagccactttaaggttcacagcgttgtcgtcaacc 257

                                             
Query: 378 actatgattcgcttcttgtgaagaaggctgccca 411
           || ||||||  | |||||||||||||||| ||||
Sbjct: 256 acaatgattttcctcttgtgaagaaggctaccca 223

 Score =  107 bits (54), Expect = 6e-022
 Identities = 90/102 (88%)
 Strand = Plus / Minus

                                                                       
Query: 488 aagcatgcttgcacgaagtggcttcataattacattcaagttatattccctgaatatatg 547
           |||||| ||||||||||| |||||||| ||||||||||||||||  |||||| |||||| 
Sbjct: 146 aagcatacttgcacgaagcggcttcatgattacattcaagttatgctccctggatatatt 87

                                                     
Query: 548 tgaattgctcttgacagaacttttagggttctccaaaagaaa 589
           |||| ||||||||| |||| |  |||||||||||||||||||
Sbjct: 86  tgaactgctcttgatagaattcgtagggttctccaaaagaaa 45
>gb|AV926843.1|AV926843 AV926843 K. Sato unpublished cDNA library, cv. Haruna Nijo second
           leaf stage seedling leaves Hordeum vulgare subsp.
           vulgare cDNA clone basd23p17 5', mRNA sequence
          Length = 609

 Score =  226 bits (114), Expect = 9e-058
 Identities = 340/413 (82%), Gaps = 3/413 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   acaattgctcgccctcgaatggcttggaaacataaccatccatttcagatttcaagcatt 60
           |||| ||||| || || ||||||||||| ||||| |||||||||||| ||||||| || |
Sbjct: 606 acaactgctccccttcaaatggcttggagacatagccatccatttcacatttcaaacagt 547

                                                                       
Query: 61  gttcatgtgtcgcctggataacatctgctgtcatggctaatattggagttcgccactgcc 120
           | |||| ||| ||||||||||| ||||||||||| || | ||| ||||||||||||  ||
Sbjct: 546 gctcatatgttgcctggataacgtctgctgtcattgccagtatcggagttcgccacctcc 487

                                                                       
Query: 121 gaacccctacgc--attctggtggggcttctccacgttctatttgctcatttagatctct 178
            || |  || ||  |||||||||| || ||||| |||||||   |||||||||| |||||
Sbjct: 486 taa-cgttaggcacattctggtggagcctctccgcgttctacccgctcatttagctctct 428

                                                                       
Query: 179 ttccatcactctaatcctttttgtggcttcaaatccatccatttcaggcatctgtatgtc 238
           |||||||| ||| || || || ||||||||||| ||||||||||| ||||| ||||||||
Sbjct: 427 ttccatcattctgattctcttggtggcttcaaacccatccatttctggcatttgtatgtc 368

                                                                       
Query: 239 catgaaacaagcatcaaaattgtgaggaggtttcagcagtgtgattgcttccttcccact 298
           ||||||||||||||||||| ||||||| ||||| |||| ||  ||||||| |||||||||
Sbjct: 367 catgaaacaagcatcaaaactgtgaggtggttttagcaatgcaattgctttcttcccact 308

                                                                       
Query: 299 gtcagcacaagttacttccgcgccatatttctttagagcgcctgcagcaaccttgagatt 358
           ||| || ||| ||||||| || || || ||||| ||||| || ||||| || || || ||
Sbjct: 307 gtctgcgcaaattacttctgccccgtacttcttgagagcaccagcagccactttaaggtt 248

                                                                
Query: 359 tacaatattatcatcaaccactatgattcgcttcttgtgaagaaggctgccca 411
            |||   || || |||||||| ||||||  | |||||||||||||||| ||||
Sbjct: 247 cacagcgttgtcgtcaaccacaatgattttcctcttgtgaagaaggctaccca 195

 Score =  107 bits (54), Expect = 6e-022
 Identities = 90/102 (88%)
 Strand = Plus / Minus

                                                                       
Query: 488 aagcatgcttgcacgaagtggcttcataattacattcaagttatattccctgaatatatg 547
           |||||| ||||||||||| |||||||| ||||||||||||||||  |||||| |||||| 
Sbjct: 118 aagcatacttgcacgaagcggcttcatgattacattcaagttatgctccctggatatatt 59

                                                     
Query: 548 tgaattgctcttgacagaacttttagggttctccaaaagaaa 589
           |||| ||||||||| |||| |  |||||||||||||||||||
Sbjct: 58  tgaactgctcttgatagaattcgtagggttctccaaaagaaa 17
>gb|BM372123.2|BM372123 EBro03_SQ004_B12_R root, 3 week, waterlogged, cv Optic, EBro03
           Hordeum vulgare subsp. vulgare cDNA clone
           EBro03_SQ004_B12 5', mRNA sequence
          Length = 436

 Score =  226 bits (114), Expect = 9e-058
 Identities = 288/346 (83%)
 Strand = Plus / Minus

                                                                       
Query: 1   acaattgctcgccctcgaatggcttggaaacataaccatccatttcagatttcaagcatt 60
           |||| ||||| || || ||||||||||| ||||| |||||||||||| ||||||| || |
Sbjct: 390 acaactgctccccttcaaatggcttggagacatagccatccatttcacatttcaaacagt 331

                                                                       
Query: 61  gttcatgtgtcgcctggataacatctgctgtcatggctaatattggagttcgccactgcc 120
           | |||| ||| ||||||||||| ||||||||||| || | ||| ||||||||||||  ||
Sbjct: 330 gctcatatgttgcctggataacgtctgctgtcattgccagtatcggagttcgccacctcc 271

                                                                       
Query: 121 gaacccctacgcattctggtggggcttctccacgttctatttgctcatttagatctcttt 180
            |||     | ||||||||||| || ||||| |||||||   |||||||||| |||||||
Sbjct: 270 taacgttagcacattctggtggagcctctccgcgttctacccgctcatttagctctcttt 211

                                                                       
Query: 181 ccatcactctaatcctttttgtggcttcaaatccatccatttcaggcatctgtatgtcca 240
           |||||| ||| || || || ||||||||||| ||||||||||| ||||| ||||||||||
Sbjct: 210 ccatcattctgattctcttggtggcttcaaacccatccatttctggcatttgtatgtcca 151

                                                                       
Query: 241 tgaaacaagcatcaaaattgtgaggaggtttcagcagtgtgattgcttccttcccactgt 300
           ||||||||||||||||| ||||||| ||||| |||| ||  ||||||| |||||||||||
Sbjct: 150 tgaaacaagcatcaaaactgtgaggtggttttagcaatgcaattgctttcttcccactgt 91

                                                         
Query: 301 cagcacaagttacttccgcgccatatttctttagagcgcctgcagc 346
           | || ||| ||||||| || || || ||||| ||||| || |||||
Sbjct: 90  ctgcgcaaattacttctgccccgtacttcttgagagcaccagcagc 45
>gb|CA015467.1|CA015467 HT14G12r HT Hordeum vulgare subsp. vulgare cDNA clone HT14G12
           5-PRIME, mRNA sequence
          Length = 599

 Score =  226 bits (114), Expect = 9e-058
 Identities = 288/346 (83%)
 Strand = Plus / Minus

                                                                       
Query: 1   acaattgctcgccctcgaatggcttggaaacataaccatccatttcagatttcaagcatt 60
           |||| ||||| || || ||||||||||| ||||| |||||||||||| ||||||| || |
Sbjct: 498 acaactgctccccttcaaatggcttggagacatagccatccatttcacatttcaaacagt 439

                                                                       
Query: 61  gttcatgtgtcgcctggataacatctgctgtcatggctaatattggagttcgccactgcc 120
           | |||| ||| ||||||||||| ||||||||||| || | ||| ||||||||||||  ||
Sbjct: 438 gctcatatgttgcctggataacgtctgctgtcattgccagtatcggagttcgccacctcc 379

                                                                       
Query: 121 gaacccctacgcattctggtggggcttctccacgttctatttgctcatttagatctcttt 180
            |||     | ||||||||||| || ||||| |||||||   |||||||||| |||||||
Sbjct: 378 taacgttagcacattctggtggagcctctccgcgttctacccgctcatttagctctcttt 319

                                                                       
Query: 181 ccatcactctaatcctttttgtggcttcaaatccatccatttcaggcatctgtatgtcca 240
           |||||| ||| || || || ||||||||||| ||||||||||| ||||| ||||||||||
Sbjct: 318 ccatcattctgattctcttggtggcttcaaacccatccatttctggcatttgtatgtcca 259

                                                                       
Query: 241 tgaaacaagcatcaaaattgtgaggaggtttcagcagtgtgattgcttccttcccactgt 300
           ||||||||||||||||| ||||||| ||||| |||| ||  ||||||| |||||||||||
Sbjct: 258 tgaaacaagcatcaaaactgtgaggtggttttagcaatgcaattgctttcttcccactgt 199

                                                         
Query: 301 cagcacaagttacttccgcgccatatttctttagagcgcctgcagc 346
           | || ||| ||||||| || || || ||||| ||||| || |||||
Sbjct: 198 ctgcgcaaattacttctgccccgtacttcttgagagcaccagcagc 153
>gb|AV923902.1|AV923902 AV923902 K. Sato unpublished cDNA library, cv. Haruna Nijo second
           leaf stage seedling leaves Hordeum vulgare subsp.
           vulgare cDNA clone basd20a22 5', mRNA sequence
          Length = 566

 Score =  214 bits (108), Expect = 3e-054
 Identities = 308/375 (82%)
 Strand = Plus / Minus

                                                                       
Query: 37  catccatttcagatttcaagcattgttcatgtgtcgcctggataacatctgctgtcatgg 96
           ||||||||||| ||||||| || || |||| ||| ||||||||||| ||||||||||| |
Sbjct: 566 catccatttcacatttcaancagtgctcatatgttgcctggataacgtctgctgtcattg 507

                                                                       
Query: 97  ctaatattggagttcgccactgccgaacccctacgcattctggtggggcttctccacgtt 156
           | | ||| ||||||||||||  || |||     | ||||||||||| || ||||| ||||
Sbjct: 506 ccagtatcggagttcgccacctcctaacgttagcacattctggtggagcctctccgcgtt 447

                                                                       
Query: 157 ctatttgctcatttagatctctttccatcactctaatcctttttgtggcttcaaatccat 216
           |||   |||||||||| ||||||||||||| ||| || || || ||||||||||| ||||
Sbjct: 446 ctacccgctcatttagctctctttccatcattctgattctcttggtggcttcaaacccat 387

                                                                       
Query: 217 ccatttcaggcatctgtatgtccatgaaacaagcatcaaaattgtgaggaggtttcagca 276
           ||||||| ||||| ||||||||||||||||||||||||||| ||||||| ||||| ||||
Sbjct: 386 ccatttctggcatttgtatgtccatgaaacaagcatcaaaactgtgaggtggttttagca 327

                                                                       
Query: 277 gtgtgattgcttccttcccactgtcagcacaagttacttccgcgccatatttctttagag 336
            ||  ||||||| |||||||||||| || ||| ||||||| || || || ||||| ||||
Sbjct: 326 atgcaattgctttcttcccactgtctgcgcaaattacttctgccccgtacttcttgagag 267

                                                                       
Query: 337 cgcctgcagcaaccttgagatttacaatattatcatcaaccactatgattcgcttcttgt 396
           | || ||||| || || || || |||   || || |||||||| ||||||  | ||||||
Sbjct: 266 caccagcagccactttaaggttcacagcgttgtcgtcaaccacaatgattttcctcttgt 207

                          
Query: 397 gaagaaggctgccca 411
           |||||||||| ||||
Sbjct: 206 gaagaaggctaccca 192

 Score =  107 bits (54), Expect = 6e-022
 Identities = 90/102 (88%)
 Strand = Plus / Minus

                                                                       
Query: 488 aagcatgcttgcacgaagtggcttcataattacattcaagttatattccctgaatatatg 547
           |||||| ||||||||||| |||||||| ||||||||||||||||  |||||| |||||| 
Sbjct: 115 aagcatacttgcacgaagcggcttcatgattacattcaagttatgctccctggatatatt 56

                                                     
Query: 548 tgaattgctcttgacagaacttttagggttctccaaaagaaa 589
           |||| ||||||||| |||| |  |||||||||||||||||||
Sbjct: 55  tgaactgctcttgatagaattcgtagggttctccaaaagaaa 14
>gb|BE215258.1|BE215258 HV_CEb0006E21f Hordeum vulgare seedling green leaf EST library
           HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
           vulgare cDNA clone HV_CEb0006E21f, mRNA sequence
          Length = 677

 Score =  109 bits (55), Expect = 1e-022
 Identities = 161/195 (82%), Gaps = 1/195 (0%)
 Strand = Plus / Minus

                                                                       
Query: 488 aagcatgcttgcacgaagtggcttcataattacattcaagttatattccctgaatatatg 547
           |||||| ||||||||||| |||||||| ||||||||||||||||  |||||| |||||| 
Sbjct: 420 aagcatacttgcacgaagcggcttcatgattacattcaagttatgctccctggatatatt 361

                                                                       
Query: 548 tgaattgctcttgacagaacttttagggttctccaaaagaaataactttgtagagtctgg 607
           |||| ||||||||| |||| |  ||||||||||||||||||| | ||| | || ||||| 
Sbjct: 360 tgaactgctcttgatagaattcgtagggttctccaaaagaaagaccttcggagggtctga 301

                                                                       
Query: 608 ctgatacaatgttcctcaatttagtaaccaaaagaggcatggagtgggattctttcagcc 667
           ||||| |  || ||| ||||||  ||| |||  ||||||| || |||||||| || ||||
Sbjct: 300 ctgat-ctttgctccgcaatttgctaagcaattgaggcattgaatgggattccttaagcc 242

                          
Query: 668 aggtttctttgtcaa 682
           |||| || |||||||
Sbjct: 241 aggtctccttgtcaa 227

 Score = 42.1 bits (21), Expect = 0.028
 Identities = 96/121 (79%)
 Strand = Plus / Minus

                                                                       
Query: 291 ttcccactgtcagcacaagttacttccgcgccatatttctttagagcgcctgcagcaacc 350
           ||||||||||| || ||| ||||||| || || || ||||| ||||| || ||||| || 
Sbjct: 617 ttcccactgtctgcgcaaattacttctgccccgtacttcttgagagcaccagcagccact 558

                                                                       
Query: 351 ttgagatttacaatattatcatcaaccactatgattcgcttcttgtgaagaaggctgccc 410
           || || || |||   || || |||||||| ||||||  | |||||||||||||||| |||
Sbjct: 557 ttaaggttcacagcgttgtcgtcaaccacaatgattttcctcttgtgaagaaggctaccc 498

            
Query: 411 a 411
           |
Sbjct: 497 a 497
>gb|AV931736.1|AV931736 AV931736 K. Sato unpublished cDNA library, cv. Haruna Nijo second
           leaf stage seedling leaves Hordeum vulgare subsp.
           vulgare cDNA clone basd23p17 3', mRNA sequence
          Length = 684

 Score = 87.7 bits (44), Expect = 5e-016
 Identities = 95/112 (84%)
 Strand = Plus / Plus

                                                                       
Query: 1   acaattgctcgccctcgaatggcttggaaacataaccatccatttcagatttcaagcatt 60
           |||| ||||| || || ||||||||||| ||||| |||||||||||| ||||||| || |
Sbjct: 573 acaactgctccccttcaaatggcttggagacatagccatccatttcacatttcaaacagt 632

                                                               
Query: 61  gttcatgtgtcgcctggataacatctgctgtcatggctaatattggagttcg 112
           | |||| ||| ||||||||||| ||||||||||| || | ||| ||||||||
Sbjct: 633 gctcatatgttgcctggataacgtctgctgtcattgccagtatcggagttcg 684
>gb|AV931964.1|AV931964 AV931964 K. Sato unpublished cDNA library, cv. Haruna Nijo second
           leaf stage seedling leaves Hordeum vulgare subsp.
           vulgare cDNA clone basd26p01 3', mRNA sequence
          Length = 673

 Score = 87.7 bits (44), Expect = 5e-016
 Identities = 95/112 (84%)
 Strand = Plus / Plus

                                                                       
Query: 1   acaattgctcgccctcgaatggcttggaaacataaccatccatttcagatttcaagcatt 60
           |||| ||||| || || ||||||||||| ||||| |||||||||||| ||||||| || |
Sbjct: 562 acaactgctccccttcaaatggcttggagacatagccatccatttcacatttcaaacagt 621

                                                               
Query: 61  gttcatgtgtcgcctggataacatctgctgtcatggctaatattggagttcg 112
           | |||| ||| ||||||||||| ||||||||||| || | ||| ||||||||
Sbjct: 622 gctcatatgttgcctggataacgtctgctgtcattgccagtatcggagttcg 673
>gb|AV929045.1|AV929045 AV929045 K. Sato unpublished cDNA library, cv. Haruna Nijo second
           leaf stage seedling leaves Hordeum vulgare subsp.
           vulgare cDNA clone basd20m13 3', mRNA sequence
          Length = 670

 Score = 83.8 bits (42), Expect = 8e-015
 Identities = 81/94 (86%)
 Strand = Plus / Plus

                                                                       
Query: 1   acaattgctcgccctcgaatggcttggaaacataaccatccatttcagatttcaagcatt 60
           |||| ||||| || || ||||||||||| ||||| |||||||||||| ||||||| || |
Sbjct: 573 acaactgctccccttcaaatggcttggagacatagccatccatttcacatttcaaacagt 632

                                             
Query: 61  gttcatgtgtcgcctggataacatctgctgtcat 94
           | |||| ||| ||||||||||| |||||||||||
Sbjct: 633 gctcatatgttgcctggataacgtctgctgtcat 666
>gb|BJ476928.1|BJ476928 BJ476928 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
           heading stage top three leaves Hordeum vulgare subsp.
           vulgare cDNA clone baal37n04 3', mRNA sequence
          Length = 674

 Score = 83.8 bits (42), Expect = 8e-015
 Identities = 81/94 (86%)
 Strand = Plus / Plus

                                                                       
Query: 1   acaattgctcgccctcgaatggcttggaaacataaccatccatttcagatttcaagcatt 60
           |||| ||||| || || ||||||||||| ||||| |||||||||||| ||||||| || |
Sbjct: 577 acaactgctccccttcaaatggcttggagacatagccatccatttcacatttcaaacagt 636

                                             
Query: 61  gttcatgtgtcgcctggataacatctgctgtcat 94
           | |||| ||| ||||||||||| |||||||||||
Sbjct: 637 gctcatatgttgcctggataacgtctgctgtcat 670
>gb|CA007616.1|CA007616 HU08I04r HU Hordeum vulgare subsp. vulgare cDNA clone HU08I04
           5-PRIME, mRNA sequence
          Length = 622

 Score = 40.1 bits (20), Expect = 0.11
 Identities = 90/112 (80%), Gaps = 1/112 (0%)
 Strand = Plus / Minus

                                                                       
Query: 571 tagggttctccaaaagaaataactttgtagagtctggctgatacaatgttcctcaattta 630
           ||||||||||||||||||| | ||| | || ||||| ||||| |  || ||| |||||| 
Sbjct: 616 tagggttctccaaaagaaagaccttcggagggtctgactgat-ctttgctccgcaatttg 558

                                                               
Query: 631 gtaaccaaaagaggcatggagtgggattctttcagccaggtttctttgtcaa 682
            ||| |||  ||||||| || |||||||| || |||||||| || |||||||
Sbjct: 557 ctaagcaattgaggcattgaatgggattccttaagccaggtctccttgtcaa 506
  Database: Hordeum_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:16 PM
  Number of letters in database: 175,134,539
  Number of sequences in database:  312,970
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 64,542
Number of Sequences: 312970
Number of extensions: 64542
Number of successful extensions: 19537
Number of sequences better than  0.5: 13
Number of HSP's better than  0.5 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 19494
Number of HSP's gapped (non-prelim): 37
length of query: 798
length of database: 175,134,539
effective HSP length: 19
effective length of query: 779
effective length of database: 169,188,109
effective search space: 131797536911
effective search space used: 131797536911
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)