BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2922023.2.1
(1122 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BG415364.1|BG415364 HVSMEk0006D05f Hordeum vulgare testa... 492 e-137
gb|CA020367.1|CA020367 HZ36B11r HZ Hordeum vulgare subsp. v... 452 e-125
gb|AL503956.1|AL503956 AL503956 Hordeum vulgare Barke roots... 389 e-106
gb|BG415730.2|BG415730 HVSMEk0007J21f Hordeum vulgare testa... 381 e-104
gb|CA025775.1|CA025775 HZ53B18r HZ Hordeum vulgare subsp. v... 325 2e-087
gb|BM098954.2|BM098954 EBpi05_SQ002_I16_R pistil, 8 DPA, no... 291 3e-077
gb|BG415734.2|BG415734 HVSMEk0007K06f Hordeum vulgare testa... 276 1e-072
gb|CA026404.1|CA026404 HZ55N04r HZ Hordeum vulgare subsp. v... 268 4e-070
gb|CA024413.1|CA024413 HZ49D23r HZ Hordeum vulgare subsp. v... 264 6e-069
gb|AL501368.1|AL501368 AL501368 Hordeum vulgare Barke roots... 252 2e-065
gb|CB884128.1|CB884128 HZ55P09r HZ Hordeum vulgare subsp. v... 248 3e-064
gb|CA028123.1|CA028123 HZ61B02r HZ Hordeum vulgare subsp. v... 218 3e-055
gb|BM096938.2|BM096938 EBpi07_SQ001_N17_R pistil, 12 DPA, n... 188 3e-046
gb|BG309012.1|BG309012 HVSMEc0001G16f Hordeum vulgare seedl... 151 6e-035
gb|CA024346.1|CA024346 HZ49A22r HZ Hordeum vulgare subsp. v... 149 2e-034
gb|CB884132.1|CB884132 HZ57N15r HZ Hordeum vulgare subsp. v... 139 2e-031
emb|Z97023.1|HVZ97023 Hordeum vulgare mRNA encoding cystein... 137 9e-031
gb|BM100328.1|BM100328 EBma01_SQ001_N23_R maternal, 4 DPA, ... 125 3e-027
gb|BM373609.2|BM373609 EBma03_SQ002_B17_R maternal, 8 DPA, ... 123 1e-026
gb|CB884103.1|CB884103 HZ37N06r HZ Hordeum vulgare subsp. v... 123 1e-026
gb|CB884105.1|CB884105 HZ40M21r HZ Hordeum vulgare subsp. v... 123 1e-026
gb|CB884108.1|CB884108 HZ43L23r HZ Hordeum vulgare subsp. v... 123 1e-026
gb|CB884109.1|CB884109 HZ45F04r HZ Hordeum vulgare subsp. v... 123 1e-026
gb|CB884116.1|CB884116 HZ50C14r HZ Hordeum vulgare subsp. v... 123 1e-026
gb|CB884121.1|CB884121 HZ51L19r HZ Hordeum vulgare subsp. v... 123 1e-026
gb|CB884122.1|CB884122 HZ51O05r HZ Hordeum vulgare subsp. v... 123 1e-026
gb|CB884137.1|CB884137 HZ59B23r HZ Hordeum vulgare subsp. v... 123 1e-026
gb|CB884146.1|CB884146 HZ64P09r HZ Hordeum vulgare subsp. v... 123 1e-026
gb|CB884119.1|CB884119 HZ50J09r HZ Hordeum vulgare subsp. v... 117 8e-025
gb|CB884130.1|CB884130 HZ56J24r HZ Hordeum vulgare subsp. v... 117 8e-025
gb|CB884135.1|CB884135 HZ58F04r HZ Hordeum vulgare subsp. v... 117 8e-025
gb|CB884131.1|CB884131 HZ57B09r HZ Hordeum vulgare subsp. v... 113 1e-023
gb|CB884107.1|CB884107 HZ43B02r HZ Hordeum vulgare subsp. v... 111 5e-023
gb|BQ758058.1|BQ758058 EBes01_SQ001_O16_R embryo sac, 4-6 D... 109 2e-022
gb|BU988225.1|BU988225 HF17A14r HF Hordeum vulgare subsp. v... 105 3e-021
gb|BJ466665.1|BJ466665 BJ466665 K. Sato unpublished cDNA li... 100 2e-019
gb|BI959700.1|BI959700 HVSMEn0020N17f Hordeum vulgare rachi... 94 1e-017
gb|BJ464204.1|BJ464204 BJ464204 K. Sato unpublished cDNA li... 94 1e-017
gb|AV915782.1|AV915782 AV915782 K. Sato unpublished cDNA li... 90 2e-016
gb|AV920897.1|AV920897 AV920897 K. Sato unpublished cDNA li... 90 2e-016
gb|AV928207.1|AV928207 AV928207 K. Sato unpublished cDNA li... 90 2e-016
gb|AV928208.1|AV928208 AV928208 K. Sato unpublished cDNA li... 90 2e-016
gb|BJ468818.1|BJ468818 BJ468818 K. Sato unpublished cDNA li... 90 2e-016
gb|BJ468819.1|BJ468819 BJ468819 K. Sato unpublished cDNA li... 90 2e-016
gb|BI948633.1|BI948633 HVSMEl0010F07f Hordeum vulgare spike... 88 7e-016
gb|BU999912.1|BU999912 HS16O03u HS Hordeum vulgare subsp. v... 88 7e-016
gb|CA017567.1|CA017567 HV05J07r HV Hordeum vulgare subsp. v... 88 7e-016
gb|CA018792.1|CA018792 HV09K16r HV Hordeum vulgare subsp. v... 88 7e-016
gb|U19384.1|HVU19384 Hordeum vulgare cysteine proteinase EP... 88 7e-016
emb|Z97021.1|HVZ97021 Hordeum vulgare gene encoding cystein... 86 3e-015
emb|Z97022.1|HVZ97022 Hordeum vulgare gene encoding cystein... 86 3e-015
gb|BF256657.2|BF256657 HVSMEf0010J23f Hordeum vulgare seedl... 82 5e-014
gb|CA013849.1|CA013849 HT09K13r HT Hordeum vulgare subsp. v... 82 5e-014
gb|BQ471140.1|BQ471140 HV01B20T HV Hordeum vulgare subsp. v... 80 2e-013
gb|BQ471157.1|BQ471157 HV01F03T HV Hordeum vulgare subsp. v... 80 2e-013
gb|BQ471297.1|BQ471297 HV02B01r HV Hordeum vulgare subsp. v... 80 2e-013
gb|CB884207.1|CB884207 HV11M07r HV Hordeum vulgare subsp. v... 80 2e-013
gb|BQ472128.1|BQ472128 HV04H20r HV Hordeum vulgare subsp. v... 78 7e-013
gb|BQ664085.1|BQ664085 HV01L06w HV Hordeum vulgare subsp. v... 78 7e-013
gb|BQ768681.1|BQ768681 EBro08_SQ012_K07_R root, 3 week, dro... 78 7e-013
gb|CA017704.1|CA017704 HV05P19r HV Hordeum vulgare subsp. v... 78 7e-013
gb|CB882748.1|CB882748 HL02L21w HL Hordeum vulgare subsp. v... 78 7e-013
gb|CB884194.1|CB884194 HV08J05u HV Hordeum vulgare subsp. v... 76 3e-012
gb|BF256849.3|BF256849 HVSMEf0011C24f Hordeum vulgare seedl... 74 1e-011
gb|U19359.1|HVU19359 Hordeum vulgare cysteine proteinase EP... 74 1e-011
gb|BI956727.1|BI956727 HVSMEn0005A04f Hordeum vulgare rachi... 72 4e-011
gb|AJ461406.1|AJ461406 AJ461406 S00002 Hordeum vulgare subs... 70 2e-010
gb|AJ461407.1|AJ461407 AJ461407 S00002 Hordeum vulgare subs... 70 2e-010
gb|CA019066.1|CA019066 HV10K10r HV Hordeum vulgare subsp. v... 70 2e-010
gb|CB884208.1|CB884208 HV11M07u HV Hordeum vulgare subsp. v... 70 2e-010
gb|BQ464939.1|BQ464939 HU02D03r HU Hordeum vulgare subsp. v... 68 7e-010
gb|BU979600.1|BU979600 HA16K22r HA Hordeum vulgare subsp. v... 68 7e-010
gb|CA001622.1|CA001622 HS05B16r HS Hordeum vulgare subsp. v... 68 7e-010
gb|CA018420.1|CA018420 HV08J05r HV Hordeum vulgare subsp. v... 68 7e-010
gb|CA018842.1|CA018842 HV09N03r HV Hordeum vulgare subsp. v... 68 7e-010
gb|CA027103.1|CA027103 HZ57O09r HZ Hordeum vulgare subsp. v... 68 7e-010
gb|CA031300.1|CA031300 HX09I24r HX Hordeum vulgare subsp. v... 68 7e-010
gb|CB884204.1|CB884204 HV10K10u HV Hordeum vulgare subsp. v... 68 7e-010
gb|CK122888.1|CK122888 BES1824101b11 BES1824 Hordeum vulgar... 68 7e-010
gb|BI950636.1|BI950636 HVSMEl0021N14f Hordeum vulgare spike... 66 3e-009
gb|AJ461023.1|AJ461023 AJ461023 S00002 Hordeum vulgare subs... 66 3e-009
gb|AJ461024.1|AJ461024 AJ461024 S00002 Hordeum vulgare subs... 66 3e-009
gb|AJ461045.1|AJ461045 AJ461045 S00002 Hordeum vulgare subs... 66 3e-009
gb|BQ664707.1|BQ664707 HV04H20u HV Hordeum vulgare subsp. v... 66 3e-009
gb|BQ757301.1|BQ757301 EBem10_SQ003_K07_R embryo, 2 Day ger... 66 3e-009
gb|CA001299.1|CA001299 HS18F20u HS Hordeum vulgare subsp. v... 66 3e-009
gb|CA016223.1|CA016223 HV09K16u HV Hordeum vulgare subsp. v... 66 3e-009
gb|CA016873.1|CA016873 HV05P19u HV Hordeum vulgare subsp. v... 66 3e-009
gb|CA016925.1|CA016925 HV05J07u HV Hordeum vulgare subsp. v... 66 3e-009
gb|CA019632.1|CA019632 HV12J22r HV Hordeum vulgare subsp. v... 66 3e-009
gb|BG343507.1|BG343507 HVSMEg0005P07f Hordeum vulgare pre-a... 62 4e-008
gb|BI960036.1|BI960036 HVSMEn0022P09f Hordeum vulgare rachi... 62 4e-008
gb|AJ461308.1|AJ461308 AJ461308 S00002 Hordeum vulgare subs... 62 4e-008
gb|BQ664005.1|BQ664005 HV01B20w HV Hordeum vulgare subsp. v... 62 4e-008
gb|BE216298.2|BE216298 HV_CEb0010C01f Hordeum vulgare seedl... 60 2e-007
gb|BE558716.3|BE558716 HV_CEb0020C14f Hordeum vulgare seedl... 60 2e-007
gb|BM097386.2|BM097386 EBro01_SQ004_P20_R root, 3 week, hyd... 58 7e-007
gb|BQ762725.1|BQ762725 EBro02_SQ004_J24 _R root, 3 week, hy... 58 7e-007
gb|BQ763183.1|BQ763183 EBro02_SQ007_A15_R root, 3 week, hyd... 58 7e-007
gb|BQ767647.1|BQ767647 EBro08_SQ009_P12_R root, 3 week, dro... 58 7e-007
gb|BF260132.3|BF260132 HVSMEf0021D03f Hordeum vulgare seedl... 56 3e-006
gb|BQ469352.1|BQ469352 HM04E11r HM Hordeum vulgare subsp. v... 56 3e-006
gb|BM442197.2|BM442197 EBan01_SQ002_I02_R anther, yellow st... 56 3e-006
gb|BM442217.2|BM442217 EBan01_SQ002_I24_R anther, yellow st... 56 3e-006
gb|CA016144.1|CA016144 HV10F01u HV Hordeum vulgare subsp. v... 56 3e-006
gb|AL499696.1|AL499696 AL499696 Hordeum vulgare Barke etiol... 54 1e-005
gb|AL499989.1|AL499989 AL499989 Hordeum vulgare Barke etiol... 54 1e-005
gb|AL500436.1|AL500436 AL500436 Hordeum vulgare Barke etiol... 54 1e-005
gb|BG310420.1|BG310420 HVSMEc0018J22f Hordeum vulgare seedl... 54 1e-005
gb|BF267721.2|BF267721 HV_CEa0018L07f Hordeum vulgare seedl... 54 1e-005
gb|BF630395.3|BF630395 HVSMEb0009B06f Hordeum vulgare seedl... 54 1e-005
gb|AV917445.1|AV917445 AV917445 K. Sato unpublished cDNA li... 54 1e-005
gb|AV923200.1|AV923200 AV923200 K. Sato unpublished cDNA li... 54 1e-005
gb|AV924189.1|AV924189 AV924189 K. Sato unpublished cDNA li... 54 1e-005
gb|AV924415.1|AV924415 AV924415 K. Sato unpublished cDNA li... 54 1e-005
gb|AV926718.1|AV926718 AV926718 K. Sato unpublished cDNA li... 54 1e-005
gb|AV927028.1|AV927028 AV927028 K. Sato unpublished cDNA li... 54 1e-005
gb|AV929504.1|AV929504 AV929504 K. Sato unpublished cDNA li... 54 1e-005
gb|AV931616.1|AV931616 AV931616 K. Sato unpublished cDNA li... 54 1e-005
gb|CA018921.1|CA018921 HV10A20r HV Hordeum vulgare subsp. v... 54 1e-005
gb|CB876765.1|CB876765 HP02F10T HP Hordeum vulgare subsp. v... 54 1e-005
gb|CB876932.1|CB876932 HP02O19T HP Hordeum vulgare subsp. v... 54 1e-005
gb|CB878231.1|CB878231 HP07M15T HP Hordeum vulgare subsp. v... 54 1e-005
gb|CB879350.1|CB879350 HP11N16T HP Hordeum vulgare subsp. v... 54 1e-005
gb|CB879599.1|CB879599 HP02O19w HP Hordeum vulgare subsp. v... 54 1e-005
gb|CB882564.1|CB882564 HL02D14w HL Hordeum vulgare subsp. v... 54 1e-005
gb|AL505180.1|AL505180 AL505180 Hordeum vulgare Barke roots... 52 4e-005
gb|BM376092.1|BM376092 EBma01_SQ002_F07_R maternal, 4 DPA, ... 52 4e-005
gb|BJ471824.1|BJ471824 BJ471824 K. Sato unpublished cDNA li... 52 4e-005
gb|AV836677.1|AV836677 AV836677 K. Sato unpublished cDNA li... 50 2e-004
gb|BF624099.3|BF624099 HVSMEa0009I02f Hordeum vulgare seedl... 50 2e-004
gb|BI951599.1|BI951599 HVSMEm0001J09f Hordeum vulgare green... 50 2e-004
gb|BG365693.2|BG365693 HVSMEi0003M06f Hordeum vulgare 20 DA... 50 2e-004
gb|BE558276.2|BE558276 HV_CEb0017A19f Hordeum vulgare seedl... 50 2e-004
gb|AV925389.1|AV925389 AV925389 K. Sato unpublished cDNA li... 50 2e-004
gb|AV926964.1|AV926964 AV926964 K. Sato unpublished cDNA li... 50 2e-004
gb|BJ470713.1|BJ470713 BJ470713 K. Sato unpublished cDNA li... 50 2e-004
gb|BJ471723.1|BJ471723 BJ471723 K. Sato unpublished cDNA li... 50 2e-004
gb|BJ472478.1|BJ472478 BJ472478 K. Sato unpublished cDNA li... 50 2e-004
gb|BQ467976.1|BQ467976 HR01I12r HR Hordeum vulgare subsp. v... 50 2e-004
gb|BQ471145.1|BQ471145 HV01D01T HV Hordeum vulgare subsp. v... 50 2e-004
gb|BQ471792.1|BQ471792 HV03H22r HV Hordeum vulgare subsp. v... 50 2e-004
gb|CA008921.1|CA008921 HU12I16r HU Hordeum vulgare subsp. v... 50 2e-004
gb|CA025023.1|CA025023 HZ51A03r HZ Hordeum vulgare subsp. v... 50 2e-004
gb|CB882606.1|CB882606 HL02F15w HL Hordeum vulgare subsp. v... 50 2e-004
gb|AL504152.1|AL504152 AL504152 Hordeum vulgare Barke roots... 48 6e-004
gb|BF621203.3|BF621203 HVSMEa0006A11f Hordeum vulgare seedl... 48 6e-004
gb|BF625661.2|BF625661 HVSMEa0013C18f Hordeum vulgare seedl... 46 0.002
gb|BF628998.2|BF628998 HVSMEb0009I02f Hordeum vulgare seedl... 46 0.002
gb|BF629685.3|BF629685 HVSMEb0013C10f Hordeum vulgare seedl... 46 0.002
gb|AV932232.1|AV932232 AV932232 K. Sato unpublished cDNA li... 46 0.002
gb|AV932233.1|AV932233 AV932233 K. Sato unpublished cDNA li... 46 0.002
gb|AV935072.1|AV935072 AV935072 K. Sato unpublished cDNA li... 46 0.002
gb|AV935073.1|AV935073 AV935073 K. Sato unpublished cDNA li... 46 0.002
gb|BJ469738.1|BJ469738 BJ469738 K. Sato unpublished cDNA li... 46 0.002
gb|BJ469782.1|BJ469782 BJ469782 K. Sato unpublished cDNA li... 46 0.002
gb|BJ471946.1|BJ471946 BJ471946 K. Sato unpublished cDNA li... 46 0.002
gb|BJ473035.1|BJ473035 BJ473035 K. Sato unpublished cDNA li... 46 0.002
gb|BJ475167.1|BJ475167 BJ475167 K. Sato unpublished cDNA li... 46 0.002
gb|BJ476828.1|BJ476828 BJ476828 K. Sato unpublished cDNA li... 46 0.002
gb|BJ476873.1|BJ476873 BJ476873 K. Sato unpublished cDNA li... 46 0.002
gb|BJ477207.1|BJ477207 BJ477207 K. Sato unpublished cDNA li... 46 0.002
gb|CA004200.1|CA004200 HS16O03r HS Hordeum vulgare subsp. v... 46 0.002
gb|CA004681.1|CA004681 HS18F20r HS Hordeum vulgare subsp. v... 46 0.002
gb|CA019917.1|CA019917 HV13L09r HV Hordeum vulgare subsp. v... 46 0.002
gb|CB882400.1|CB882400 HL01M06w HL Hordeum vulgare subsp. v... 46 0.002
gb|BF624315.2|BF624315 HVSMEa0013M13f Hordeum vulgare seedl... 44 0.010
gb|BF256372.2|BF256372 HVSMEf0009G12f Hordeum vulgare seedl... 44 0.010
gb|BF267713.2|BF267713 HV_CEa0018K22f Hordeum vulgare seedl... 44 0.010
gb|BI958441.1|BI958441 HVSMEn0015A05f Hordeum vulgare rachi... 44 0.010
gb|BG365210.2|BG365210 HVSMEi0001M14f Hordeum vulgare 20 DA... 44 0.010
gb|BF265368.3|BF265368 HV_CEa0011M12f Hordeum vulgare seedl... 44 0.010
gb|AV925582.1|AV925582 AV925582 K. Sato unpublished cDNA li... 44 0.010
gb|BJ470509.1|BJ470509 BJ470509 K. Sato unpublished cDNA li... 44 0.010
gb|BU994426.1|BU994426 HM07A13r HM Hordeum vulgare subsp. v... 44 0.010
gb|BG310007.1|BG310007 HVSMEc0015P24f Hordeum vulgare seedl... 42 0.039
gb|BG301036.2|BG301036 HVSMEb0019F09f Hordeum vulgare seedl... 42 0.039
gb|BE411445.1|BE411445 ISC005.F09F990621 ITEC ISC Barley Le... 40 0.15
gb|BE437684.1|BE437684 SFR006.D07F990622 ITEC SFR Barley Le... 40 0.15
gb|AL499690.1|AL499690 AL499690 Hordeum vulgare Barke etiol... 40 0.15
gb|AL499864.1|AL499864 AL499864 Hordeum vulgare Barke etiol... 40 0.15
gb|AL500001.1|AL500001 AL500001 Hordeum vulgare Barke etiol... 40 0.15
gb|AL500018.1|AL500018 AL500018 Hordeum vulgare Barke etiol... 40 0.15
gb|AL500308.1|AL500308 AL500308 Hordeum vulgare Barke etiol... 40 0.15
gb|AL500385.1|AL500385 AL500385 Hordeum vulgare Barke etiol... 40 0.15
gb|AL501440.1|AL501440 AL501440 Hordeum vulgare Barke roots... 40 0.15
gb|AL501849.1|AL501849 AL501849 Hordeum vulgare Barke roots... 40 0.15
gb|AL502221.1|AL502221 AL502221 Hordeum vulgare Barke roots... 40 0.15
gb|AL502813.1|AL502813 AL502813 Hordeum vulgare Barke roots... 40 0.15
gb|AL504102.1|AL504102 AL504102 Hordeum vulgare Barke roots... 40 0.15
gb|AL504322.1|AL504322 AL504322 Hordeum vulgare Barke roots... 40 0.15
gb|AL505111.1|AL505111 AL505111 Hordeum vulgare Barke roots... 40 0.15
gb|AL505382.1|AL505382 AL505382 Hordeum vulgare Barke roots... 40 0.15
gb|AL508065.1|AL508065 AL508065 Hordeum vulgare Barke devel... 40 0.15
gb|AL508750.1|AL508750 AL508750 Hordeum vulgare Barke devel... 40 0.15
gb|BF622493.2|BF622493 HVSMEa0004I23f Hordeum vulgare seedl... 40 0.15
gb|BG299613.1|BG299613 HVSMEa0021A20f Hordeum vulgare seedl... 40 0.15
gb|BG299973.1|BG299973 HVSMEa0022M13f Hordeum vulgare seedl... 40 0.15
gb|BF626679.2|BF626679 HVSMEb0001A22f Hordeum vulgare seedl... 40 0.15
gb|BF626776.2|BF626776 HVSMEb0001E23f Hordeum vulgare seedl... 40 0.15
gb|BF630176.2|BF630176 HVSMEb0008D09f Hordeum vulgare seedl... 40 0.15
gb|BF618844.2|BF618844 HVSMEc0008B19f Hordeum vulgare seedl... 40 0.15
gb|BF254511.2|BF254511 HVSMEf0004D16f Hordeum vulgare seedl... 40 0.15
gb|BF254700.2|BF254700 HVSMEf0004M09f Hordeum vulgare seedl... 40 0.15
gb|BF258142.2|BF258142 HVSMEf0014O15f Hordeum vulgare seedl... 40 0.15
gb|BF259283.2|BF259283 HVSMEf0018M02f Hordeum vulgare seedl... 40 0.15
gb|BF260192.2|BF260192 HVSMEf0021F15f Hordeum vulgare seedl... 40 0.15
gb|BE454433.2|BE454433 HVSMEh0094G24f Hordeum vulgare 5-45 ... 40 0.15
gb|BG365631.1|BG365631 HVSMEi0003H23f Hordeum vulgare 20 DA... 40 0.15
gb|BI947036.1|BI947036 HVSMEl0003F12f Hordeum vulgare spike... 40 0.15
gb|BI953159.1|BI953159 HVSMEm0011G07f Hordeum vulgare green... 40 0.15
gb|BI953275.1|BI953275 HVSMEm0011P16f Hordeum vulgare green... 40 0.15
gb|BI953873.1|BI953873 HVSMEm0015C07f Hordeum vulgare green... 40 0.15
gb|BI954262.1|BI954262 HVSMEm0016O06f Hordeum vulgare green... 40 0.15
gb|BF261469.1|BF261469 HV_CEa0001F22f Hordeum vulgare seedl... 40 0.15
gb|BF263326.2|BF263326 HV_CEa0006H07f Hordeum vulgare seedl... 40 0.15
gb|BF263371.2|BF263371 HV_CEa0006J04f Hordeum vulgare seedl... 40 0.15
gb|BF263379.2|BF263379 HV_CEa0006J12f Hordeum vulgare seedl... 40 0.15
gb|BF267048.2|BF267048 HV_CEa0016M18f Hordeum vulgare seedl... 40 0.15
gb|BF627029.3|BF627029 HVSMEb0002A10f Hordeum vulgare seedl... 40 0.15
gb|BF630201.3|BF630201 HVSMEb0008E18f Hordeum vulgare seedl... 40 0.15
gb|BF258336.3|BF258336 HVSMEf0015H07f Hordeum vulgare seedl... 40 0.15
gb|BF259200.3|BF259200 HVSMEf0018C02f Hordeum vulgare seedl... 40 0.15
gb|BE196106.3|BE196106 HVSMEh0091G03f Hordeum vulgare 5-45 ... 40 0.15
gb|BE196180.3|BE196180 HVSMEh0091J08f Hordeum vulgare 5-45 ... 40 0.15
gb|BE196222.3|BE196222 HVSMEh0091L06f Hordeum vulgare 5-45 ... 40 0.15
gb|BG367222.2|BG367222 HVSMEi0011F17f Hordeum vulgare 20 DA... 40 0.15
gb|BG415097.2|BG415097 HVSMEk0005C06f Hordeum vulgare testa... 40 0.15
gb|BG415704.2|BG415704 HVSMEk0007I10f Hordeum vulgare testa... 40 0.15
gb|BF264420.2|BF264420 HV_CEa0009G02f Hordeum vulgare seedl... 40 0.15
gb|BE519597.3|BE519597 HV_CEb0016F05f Hordeum vulgare seedl... 40 0.15
gb|AV910340.1|AV910340 AV910340 K. Sato unpublished cDNA li... 40 0.15
gb|AV912491.1|AV912491 AV912491 K. Sato unpublished cDNA li... 40 0.15
gb|AV913754.1|AV913754 AV913754 K. Sato unpublished cDNA li... 40 0.15
gb|AV920610.1|AV920610 AV920610 K. Sato unpublished cDNA li... 40 0.15
gb|AV921362.1|AV921362 AV921362 K. Sato unpublished cDNA li... 40 0.15
gb|AV922852.1|AV922852 AV922852 K. Sato unpublished cDNA li... 40 0.15
gb|AV923635.1|AV923635 AV923635 K. Sato unpublished cDNA li... 40 0.15
gb|AV925173.1|AV925173 AV925173 K. Sato unpublished cDNA li... 40 0.15
gb|AV925573.1|AV925573 AV925573 K. Sato unpublished cDNA li... 40 0.15
gb|AV927476.1|AV927476 AV927476 K. Sato unpublished cDNA li... 40 0.15
gb|AV927572.1|AV927572 AV927572 K. Sato unpublished cDNA li... 40 0.15
gb|AV927641.1|AV927641 AV927641 K. Sato unpublished cDNA li... 40 0.15
gb|AV929742.1|AV929742 AV929742 K. Sato unpublished cDNA li... 40 0.15
gb|AV930249.1|AV930249 AV930249 K. Sato unpublished cDNA li... 40 0.15
gb|AV930489.1|AV930489 AV930489 K. Sato unpublished cDNA li... 40 0.15
gb|AV930959.1|AV930959 AV930959 K. Sato unpublished cDNA li... 40 0.15
gb|AV930960.1|AV930960 AV930960 K. Sato unpublished cDNA li... 40 0.15
gb|AV930969.1|AV930969 AV930969 K. Sato unpublished cDNA li... 40 0.15
gb|AV931202.1|AV931202 AV931202 K. Sato unpublished cDNA li... 40 0.15
gb|AV931203.1|AV931203 AV931203 K. Sato unpublished cDNA li... 40 0.15
gb|AV931213.1|AV931213 AV931213 K. Sato unpublished cDNA li... 40 0.15
gb|AV933128.1|AV933128 AV933128 K. Sato unpublished cDNA li... 40 0.15
gb|AV933415.1|AV933415 AV933415 K. Sato unpublished cDNA li... 40 0.15
gb|AV935662.1|AV935662 AV935662 K. Sato unpublished cDNA li... 40 0.15
gb|AV935861.1|AV935861 AV935861 K. Sato unpublished cDNA li... 40 0.15
gb|AV936684.1|AV936684 AV936684 K. Sato unpublished cDNA li... 40 0.15
gb|BM816045.1|BM816045 HC02E03_T3.ab1 HC Hordeum vulgare su... 40 0.15
gb|BM816472.1|BM816472 HB106F05_SK.ab1 HB Hordeum vulgare s... 40 0.15
gb|BM816473.1|BM816473 HB03A05_T3.ab1 HB Hordeum vulgare su... 40 0.15
gb|AJ434691.1|AJ434691 AJ434691 S00002 Hordeum vulgare subs... 40 0.15
gb|BQ465296.1|BQ465296 HU03D12r HU Hordeum vulgare subsp. v... 40 0.15
gb|BQ467855.1|BQ467855 HR01C09r HR Hordeum vulgare subsp. v... 40 0.15
gb|BQ468396.1|BQ468396 HM01C07T HM Hordeum vulgare subsp. v... 40 0.15
gb|BQ661988.1|BQ661988 HR01B22u HR Hordeum vulgare subsp. v... 40 0.15
gb|BQ661996.1|BQ661996 HR01C09u HR Hordeum vulgare subsp. v... 40 0.15
gb|BI780356.2|BI780356 EBem06_SQ001_I06_R embryo, 21 DPA, n... 40 0.15
gb|BM372047.2|BM372047 EBma08_SQ004_M20_R maternal, 28 DPA,... 40 0.15
gb|BQ755499.1|BQ755499 EBed07_SQ002_E20_R endosperm, 28 DPA... 40 0.15
gb|BQ756647.1|BQ756647 EBem09_SQ003_F14_R embryo, 1 Day ger... 40 0.15
gb|BQ768365.1|BQ768365 EBro08_SQ011_B17_R root, 3 week, dro... 40 0.15
gb|BU966770.1|BU966770 HB02E22r BC Hordeum vulgare subsp. v... 40 0.15
gb|BU995263.1|BU995263 HM09L08r HM Hordeum vulgare subsp. v... 40 0.15
gb|BU995412.1|BU995412 HM10C21r HM Hordeum vulgare subsp. v... 40 0.15
gb|BU997156.1|BU997156 HI07B15r HI Hordeum vulgare subsp. v... 40 0.15
gb|CA008020.1|CA008020 HU09K20r HU Hordeum vulgare subsp. v... 40 0.15
gb|CA008091.1|CA008091 HU09N24r HU Hordeum vulgare subsp. v... 40 0.15
gb|CA026214.1|CA026214 HZ55E06r HZ Hordeum vulgare subsp. v... 40 0.15
gb|CA028010.1|CA028010 HZ60L15r HZ Hordeum vulgare subsp. v... 40 0.15
gb|BJ543829.1|BJ543829 BJ543829 K. Sato unpublished cDNA li... 40 0.15
gb|BJ544337.1|BJ544337 BJ544337 K. Sato unpublished cDNA li... 40 0.15
gb|BJ544546.1|BJ544546 BJ544546 K. Sato unpublished cDNA li... 40 0.15
gb|BJ545397.1|BJ545397 BJ545397 K. Sato unpublished cDNA li... 40 0.15
gb|BJ545697.1|BJ545697 BJ545697 K. Sato unpublished cDNA li... 40 0.15
gb|BJ545792.1|BJ545792 BJ545792 K. Sato unpublished cDNA li... 40 0.15
gb|BJ545911.1|BJ545911 BJ545911 K. Sato unpublished cDNA li... 40 0.15
gb|BJ546007.1|BJ546007 BJ546007 K. Sato unpublished cDNA li... 40 0.15
gb|BJ546038.1|BJ546038 BJ546038 K. Sato unpublished cDNA li... 40 0.15
gb|BJ548137.1|BJ548137 BJ548137 K. Sato unpublished cDNA li... 40 0.15
gb|BJ548737.1|BJ548737 BJ548737 K. Sato unpublished cDNA li... 40 0.15
gb|BJ548994.1|BJ548994 BJ548994 K. Sato unpublished cDNA li... 40 0.15
gb|BJ549852.1|BJ549852 BJ549852 K. Sato unpublished cDNA li... 40 0.15
gb|BJ549874.1|BJ549874 BJ549874 K. Sato unpublished cDNA li... 40 0.15
gb|CB874405.1|CB874405 HX05C19w HX Hordeum vulgare subsp. v... 40 0.15
gb|CB876962.1|CB876962 HP03B02T HP Hordeum vulgare subsp. v... 40 0.15
gb|CB879793.1|CB879793 HP03L09w HP Hordeum vulgare subsp. v... 40 0.15
gb|CB880584.1|CB880584 HM06P20w HM Hordeum vulgare subsp. v... 40 0.15
gb|CD663309.1|CD663309 UCRHV18_05ad01_b1 Drought-stressed D... 40 0.15
tpe|BN000093.1|HVA000093 TPA: Hordeum vulgare mRNA for a se... 40 0.15
>gb|BG415364.1|BG415364 HVSMEk0006D05f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0006D05f, mRNA sequence
Length = 660
Score = 492 bits (248), Expect = e-137
Identities = 546/642 (85%), Gaps = 5/642 (0%)
Strand = Plus / Minus
Query: 280 gaggtcttgacggggtaggatgcctccatggcgatgccgcagtgtccctccttggcggcc 339
||||||||||| |||||||| |||||||||||||| |||||| | || |||||| | |
Sbjct: 642 gaggtcttgactgggtaggacgcctccatggcgatcccgcagagcccttccttgtccttc 583
Query: 340 acgtcgcgcgccatgcggatgtaccccttctcgccccactcggggccccacgagttcttg 399
|| |||||| |||||||||||| |||||||| |||||||| || ||||| ||||| ||
Sbjct: 582 acatcgcgcttcatgcggatgtatcccttctcaccccactccggcccccatgagtttttc 523
Query: 400 accagccagtacttggtgccgtccgcggtgaccccgtagccgaccgccgcgacgccgtgg 459
|| | ||| ||||||||||||||| ||||| ||||| || |||||||| ||||| |||
Sbjct: 522 acgatccaatacttggtgccgtccacggtggtgccgtaccccaccgccgccacgccatgg 463
Query: 460 tccagctccgtcccgcacctgccggagaagaccccctcggagtagaactggaagtgcgag 519
|||||||||||||||||| |||| | ||| |||||||| ||||||||||||||||||||
Sbjct: 462 tccagctccgtcccgcacttgcccgcgaacaccccctccgagtagaactggaagtgcgac 403
Query: 520 ccgctggcctcgatggcgacggacacgggctggtgc-gccaccgccttcttgagcgccga 578
||||| ||||||||||| |||| ||| ||||| ||| |||||||||||||| ||||| |
Sbjct: 402 ccgctagcctcgatggccacggccactggctg-tgcagccaccgccttcttcagcgcggt 344
Query: 579 ctcgtcgttggccggcacgtcctcgtagccgtcgatggtgacgaccggggccggcgactt 638
||||||||||| ||||||||||| || |||||||||||||| || | || |||| |||
Sbjct: 343 ttcgtcgttggcgggcacgtcctcatacccgtcgatggtgaccacggcggacggcttctt 284
Query: 639 cttgcaggacg---cctggcgcgctctgtacgggtacgcgtcctccgccgccaccccgcc 695
|||||||| | |||| | || |||| |||||||||||||| || |||||||||||
Sbjct: 283 gttgcaggaggaggcctgcctggccttgtaggggtacgcgtcctcggcggccaccccgcc 224
Query: 696 gtgcttggcgatgtactggaacgcgtagtccatgaggcccccgttgcagccggcgttggc 755
|||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||
Sbjct: 223 atgcttggcgatgtactggaaggcgtagtccatgaggccgccgttgcagccggcgttgga 164
Query: 756 cttggtgtcgcagtccaccagctgctgctccgacagcgacgtcaggttcttggtcttgat 815
||| |||||||||||||| ||||||||||| ||||| ||||| |||||||| | |||
Sbjct: 163 cttcgtgtcgcagtccacgagctgctgctcggacagagacgtgaggttcttagagcggat 104
Query: 816 cgcgttgatgccctccacggcggcgatcgtcgagaacgcccagcagctaccgcattggcc 875
|||||||||||||||||||| |||||||||||||| ||||||||||| ||||| || ||
Sbjct: 103 agcgttgatgccctccacggccgcgatcgtcgagaaagcccagcagctgccgcactgccc 44
Query: 876 ctggtccttgacgtcggtgacagcgcccttctgcctccagtc 917
|||||||||||| |||| || ||||| | ||||| ||||||
Sbjct: 43 ttggtccttgacggcggtcaccgcgccttcctgccgccagtc 2
>gb|CA020367.1|CA020367 HZ36B11r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ36B11
5-PRIME, mRNA sequence
Length = 543
Score = 452 bits (228), Expect = e-125
Identities = 466/542 (85%), Gaps = 5/542 (0%)
Strand = Plus / Minus
Query: 351 catgcggatgtaccccttctcgccccactcggggccccacgagttcttgaccagccagta 410
|||||||||||| |||||||| |||||||| || ||||| ||||| || || | ||| ||
Sbjct: 543 catgcggatgtatcccttctcaccccactccggcccccatgagtttttcacgatccaata 484
Query: 411 cttggtgccgtccgcggtgaccccgtagccgaccgccgcgacgccgtggtccagctccgt 470
||||||||||||| ||||| ||||| || |||||||| ||||| || |||||||||||
Sbjct: 483 cttggtgccgtccacggtggtgccgtaccccaccgccgccacgccatgatccagctccgt 424
Query: 471 cccgcacctgccggagaagaccccctcggagtagaactggaagtgcgagccgctggcctc 530
||||||| |||| | ||| |||||||| |||||||||||||||||||| ||||| |||||
Sbjct: 423 cccgcacttgcccgcgaacaccccctccgagtagaactggaagtgcgacccgctagcctc 364
Query: 531 gatggcgacggacacgggctggtgc-gccaccgccttcttgagcgccgactcgtcgttgg 589
|||||| |||| ||| ||||| ||| |||||||||||||| ||||| | ||||||||||
Sbjct: 363 gatggccacggccactggctg-tgcagccaccgccttcttcagcgcggtttcgtcgttgg 305
Query: 590 ccggcacgtcctcgtagccgtcgatggtgacgaccggggccggcgacttcttgcaggacg 649
| ||||||||||| || |||||||||||||| || | || |||| ||| |||||||| |
Sbjct: 304 cgggcacgtcctcatacccgtcgatggtgaccacggcggacggcttcttgttgcaggagg 245
Query: 650 ---cctggcgcgctctgtacgggtacgcgtcctccgccgccaccccgccgtgcttggcga 706
|||| | || |||| |||||||||||||| || ||||||||||| ||||||||||
Sbjct: 244 aggcctgcctggccttgtaggggtacgcgtcctcggcggccaccccgccatgcttggcga 185
Query: 707 tgtactggaacgcgtagtccatgaggcccccgttgcagccggcgttggccttggtgtcgc 766
|||||||||| ||||||||||||||||| ||||||||||||||||||| ||| |||||||
Sbjct: 184 tgtactggaaggcgtagtccatgaggccgccgttgcagccggcgttggacttcgtgtcgc 125
Query: 767 agtccaccagctgctgctccgacagcgacgtcaggttcttggtcttgatcgcgttgatgc 826
||||||| ||||||||||| ||||| ||||| |||||||| || ||| ||||||||||
Sbjct: 124 agtccacgagctgctgctcggacagagacgtgaggttcttagtgcggatagcgttgatgc 65
Query: 827 cctccacggcggcgatcgtcgagaacgcccagcagctaccgcattggccctggtccttga 886
|||||||||| |||||||||||||| ||||||||||| ||||| || |||||||||||||
Sbjct: 64 cctccacggccgcgatcgtcgagaaagcccagcagctgccgcactgcccctggtccttga 5
Query: 887 cg 888
||
Sbjct: 4 cg 3
>gb|AL503956.1|AL503956 AL503956 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW03P10T 5', mRNA sequence
Length = 663
Score = 389 bits (196), Expect = e-106
Identities = 437/514 (85%), Gaps = 5/514 (0%)
Strand = Plus / Minus
Query: 271 gggttgggcgaggtcttgacggggtaggatgcctccatggcgatgccgcagtgtccctcc 330
||||||| ||||||||||| |||||||| |||||||||||||| |||||| | || |||
Sbjct: 513 gggttggctgaggtcttgactgggtaggacgcctccatggcgatcccgcagagcccttcc 454
Query: 331 ttggcggccacgtcgcgcgccatgcggatgtaccccttctcgccccactcggggccccac 390
||| | ||| |||||| |||||||||||| |||||||| |||||||| || |||||
Sbjct: 453 ttgtccttcacatcgcgcttcatgcggatgtatcccttctcaccccactccggcccccat 394
Query: 391 gagttcttgaccagccagtacttggtgccgtccgcggtgaccccgtagccgaccgccgcg 450
||||| || || | ||| ||||||||||||||| ||||| ||||| || ||||||||
Sbjct: 393 gagtttttcacgatccaatacttggtgccgtccacggtggtgccgtaccccaccgccgcc 334
Query: 451 acgccgtggtccagctccgtcccgcacctgccggagaagaccccctcggagtagaactgg 510
||||| ||||||||||||||||||||| |||| | ||| |||||||| ||||||||||||
Sbjct: 333 acgccatggtccagctccgtcccgcacttgcccgcgaacaccccctccgagtagaactgg 274
Query: 511 aagtgcgagccgctggcctcgatggcgacggacacgggctggtgc-gccaccgccttctt 569
|||||||| ||||| ||||||||||| |||| ||| |||| |||| ||||||||||||||
Sbjct: 273 aagtgcgacccgctagcctcgatggccacggccactggct-gtgcagccaccgccttctt 215
Query: 570 gagcgccgactcgtcgttggccggcacgtcctcgtagccgtcgatggtgacgaccggggc 629
||||| | ||||||||||| ||||||||||| || |||||||||||||| || | ||
Sbjct: 214 cagcgcggtttcgtcgttggcgggcacgtcctcatacccgtcgatggtgaccacggcgga 155
Query: 630 cggcgacttcttgc---aggacgcctggcgcgctctgtacgggtacgcgtcctccgccgc 686
|||| ||| |||| |||| ||||| | || |||| |||||||||||||| || ||
Sbjct: 154 cggcttcttgttgcaggaggaggcctgcctggccttgtaggggtacgcgtcctcggcggc 95
Query: 687 caccccgccgtgcttggcgatgtactggaacgcgtagtccatgaggcccccgttgcagcc 746
||||||||| |||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 94 caccccgccatgcttggcgatgtactggaaggcgtagtccatgaggccgccgttgcagcc 35
Query: 747 ggcgttggccttggtgtcgcagtccaccagctgc 780
|||||||| ||| |||||||||||||| ||||||
Sbjct: 34 ggcgttggacttcgtgtcgcagtccacgagctgc 1
>gb|BG415730.2|BG415730 HVSMEk0007J21f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0007J21f, mRNA sequence
Length = 654
Score = 381 bits (192), Expect = e-104
Identities = 441/521 (84%), Gaps = 5/521 (0%)
Strand = Plus / Minus
Query: 281 aggtcttgacggggtaggatgcctccatggcgatgccgcagtgtccctccttggcggcca 340
|||||||||| |||||||| |||||||||||||| |||||| | | |||||| | ||
Sbjct: 520 aggtcttgactgggtaggacgcctccatggcgatcccgcagagcctttccttgtccttca 461
Query: 341 cgtcgcgcgccatgcggatgtaccccttctcgccccactcggggccccacgagttcttga 400
| |||||| |||||||||||| |||||||| |||||||| || | ||| ||||| | |
Sbjct: 460 catcgcgcttcatgcggatgtatcccttctcaccccactccggcctccatgagtttntca 401
Query: 401 ccagccagtacttggtgccgtccgcggtgaccccgtagccgaccgccgcgacgccgtggt 460
| | ||| ||||||||||||||| ||||| ||||| || |||||||| ||||| ||||
Sbjct: 400 cgatccaatacttggtgccgtccacggtggtgccgtaccccaccgccgccacgccatggt 341
Query: 461 ccagctccgtcccgcacctgccggagaagaccccctcggagtagaactggaagtgcgagc 520
||||||||||||||||| |||| | ||| |||||||| |||||||||||||||||||| |
Sbjct: 340 ccagctccgtcccgcacttgcccgcgaacaccccctccgagtagaactggaagtgcgacc 281
Query: 521 cgctggcctcgatggcgacggacacgggctggtgc-gccaccgccttcttgagcgccgac 579
|||| ||||||||||| |||| ||| |||| |||| |||||||||||||| ||||| |
Sbjct: 280 cgctagcctcgatggccacggccactggct-gtgcagccaccgccttcttcagcgcggtt 222
Query: 580 tcgtcgttggccggcacgtcctcgtagccgtcgatggtgacgaccggggccggcgacttc 639
||||||||||| ||||||||||| || |||||||||||||| || | || |||| |||
Sbjct: 221 tcgtcgttggcgggcacgtcctcatacccgtcgatggtgaccacggcggacggcttcttg 162
Query: 640 ttgc---aggacgcctggcgcgctctgtacgggtacgcgtcctccgccgccaccccgccg 696
|||| |||| ||||| | || |||| |||||||||||||| || |||||||||||
Sbjct: 161 ttgcaggaggaggcctgcctggccttgtaggggtacgcgtcctcggcggccaccccgcca 102
Query: 697 tgcttggcgatgtactggaacgcgtagtccatgaggcccccgttgcagccggcgttggcc 756
|||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| |
Sbjct: 101 tgcttggcgatgtactggaaggcgtagtccatgaggccgccgttgcagccggcgttggac 42
Query: 757 ttggtgtcgcagtccaccagctgctgctccgacagcgacgt 797
|| |||||||||||||| ||||||||||| ||||| |||||
Sbjct: 41 ttcgtgtcgcagtccacgagctgctgctcggacagagacgt 1
>gb|CA025775.1|CA025775 HZ53B18r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ53B18
5-PRIME, mRNA sequence
Length = 385
Score = 325 bits (164), Expect = 2e-087
Identities = 324/374 (86%), Gaps = 5/374 (1%)
Strand = Plus / Minus
Query: 490 accccctcggagtagaactggaagtgcgagccgctggcctcgatggcgacggacacgggc 549
|||||||| |||||||||||||||||||| ||||| ||||||||||| |||| ||| |||
Sbjct: 383 accccctccgagtagaactggaagtgcgacccgctagcctcgatggccacggccactggc 324
Query: 550 tggtgc-gccaccgccttcttgagcgccgactcgtcgttggccggcacgtcctcgtagcc 608
|| ||| |||||||||||||| ||||| | ||||||||||| ||||||||||| || ||
Sbjct: 323 tg-tgcagccaccgccttcttcagcgcggtttcgtcgttggcgggcacgtcctcataccc 265
Query: 609 gtcgatggtgacgaccggggccggcgacttcttgcaggacg---cctggcgcgctctgta 665
|||||||||||| || | || |||| ||| |||||||| | |||| | || ||||
Sbjct: 264 gtcgatggtgaccacggcggacggcttcttgttgcaggaggaggcctgcctggccttgta 205
Query: 666 cgggtacgcgtcctccgccgccaccccgccgtgcttggcgatgtactggaacgcgtagtc 725
|||||||||||||| || ||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 204 ggggtacgcgtcctcggcggccaccccgccatgcttggcgatgtactggaaggcgtagtc 145
Query: 726 catgaggcccccgttgcagccggcgttggccttggtgtcgcagtccaccagctgctgctc 785
||||||||| ||||||||||||||||||| ||| |||||||||||||| |||||||||||
Sbjct: 144 catgaggccgccgttgcagccggcgttggacttcgtgtcgcagtccacgagctgctgctc 85
Query: 786 cgacagcgacgtcaggttcttggtcttgatcgcgttgatgccctccacggcggcgatcgt 845
||||| ||||| |||||||| || ||| |||||||||||||||||||| ||||||||
Sbjct: 84 ggacagagacgtgaggttcttagtgcggatagcgttgatgccctccacggccgcgatcgt 25
Query: 846 cgagaacgcccagc 859
|||||| |||||||
Sbjct: 24 cgagaaagcccagc 11
>gb|BM098954.2|BM098954 EBpi05_SQ002_I16_R pistil, 8 DPA, no treatment, cv Optic, EBpi05
Hordeum vulgare subsp. vulgare cDNA clone
EBpi05_SQ002_I16 5', mRNA sequence
Length = 403
Score = 291 bits (147), Expect = 3e-077
Identities = 294/341 (86%), Gaps = 4/341 (1%)
Strand = Plus / Minus
Query: 580 tcgtcgttggccggcacgtcctcgtagccgtcgatggtgacgaccggggccggcgacttc 639
||||||||||| ||||||||||| || |||||||||||||| || | || |||| |||
Sbjct: 394 tcgtcgttggcgggcacgtcctcatacccgtcgatggtgaccacggcggacggcttcttg 335
Query: 640 ttgcaggacg---cctggcgcgctctgtacgggtacgcgtcctccgccgccaccccgccg 696
|||||||| | |||| | || |||| |||||||||||||| || |||||||||||
Sbjct: 334 ttgcaggaggaggcctgcctggccttgtaggggtacgcgtcctcggcggccaccccgcca 275
Query: 697 tgcttggcgatgtactggaacgcgtagtccatgaggcccccgttgcagccggcgttggcc 756
|| ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| |
Sbjct: 274 tg-ttggcgatgtactggaaggcgtagtccatgaggccgccgttgcagccggcgttggac 216
Query: 757 ttggtgtcgcagtccaccagctgctgctccgacagcgacgtcaggttcttggtcttgatc 816
|| |||||||||||||| ||||||||||| ||||| ||||| |||||||| || |||
Sbjct: 215 ttcgtgtcgcagtccacgagctgctgctcggacagagacgtgaggttcttagtgcggata 156
Query: 817 gcgttgatgccctccacggcggcgatcgtcgagaacgcccagcagctaccgcattggccc 876
|||||||||||||||||||| |||||||||||||| ||||||||||| ||||| || ||
Sbjct: 155 gcgttgatgccctccacggccgcgatcgtcgagaaagcccagcagctgccgcactgccct 96
Query: 877 tggtccttgacgtcggtgacagcgcccttctgcctccagtc 917
|||||||||||| |||| || ||||||||||||| ||||||
Sbjct: 95 tggtccttgacggcggtcaccgcgcccttctgccgccagtc 55
>gb|BG415734.2|BG415734 HVSMEk0007K06f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0007K06f, mRNA sequence
Length = 669
Score = 276 bits (139), Expect = 1e-072
Identities = 445/540 (82%), Gaps = 9/540 (1%)
Strand = Plus / Minus
Query: 351 catgcggatgtaccccttctcgccccactcggggccccacgagttcttgaccagccagta 410
|||||| ||| | |||||||| ||||||||||| ||||| ||||| || || | ||| ||
Sbjct: 537 catgcgnatggatcccttctcaccccactcgggcccccatgagtttttcacgatccaata 478
Query: 411 cttggtgccgtc-cgcggtgaccccgtagccgaccgccgcgacgccgtggtccagctc-c 468
|| ||||||||| || |||| | ||| || || || || ||||| |||| ||||||
Sbjct: 477 ctgggtgccgtcacggggtggtgcggtacccaacngcggcaacgccatggt-cagctcan 419
Query: 469 gtcccgcacctgccggagaagaccccctcggagtagaactggaagtgcgagccgctggcc 528
|||| ||| |||| | ||| |||||||| ||||||| || |||||||| ||||| |||
Sbjct: 418 gtccggcatttgcccgcgaacaccccctccgagtagacttgaaagtgcgacccgctagcc 359
Query: 529 tcgatggcgacggacacgggctggtgc-gccaccgccttcttgagcgccgactcgtcgtt 587
|||||||| |||| ||| | || |||| ||||||| | |||| ||||| | ||||||||
Sbjct: 358 tcgatggccacggccactgnct-gtgcagccaccg-catcttcagcgcggtatcgtcgtt 301
Query: 588 ggccggcacgtcctcgtagccgtcgatggtgacgaccggggccggcgacttcttgc---a 644
||| ||||||||||| || | |||||||||||| || | || |||| ||| |||| |
Sbjct: 300 ggcgggcacgtcctcataccagtcgatggtgaccacggcggacggcttcttgttgcagga 241
Query: 645 ggacgcctggcgcgctctgtacgggtacgcgtcctccgccgccaccccgccgtgcttggc 704
||| ||||| | ||| |||| |||||||||||||| || ||||| ||||| ||||||||
Sbjct: 240 ggaggcctgcctggctttgtaggggtacgcgtcctcggcggccacnccgccatgcttggc 181
Query: 705 gatgtactggaacgcgtagtccatgaggcccccgttgcagccggcgttggccttggtgtc 764
|||||||||||| ||||||||||||||||| ||||||||||||||||||| ||| |||||
Sbjct: 180 gatgtactggaaggcgtagtccatgaggccgccgttgcagccggcgttggacttcgtgtc 121
Query: 765 gcagtccaccagctgctgctccgacagcgacgtcaggttcttggtcttgatcgcgttgat 824
||||||||| ||||||||||| ||||| ||||| |||||||| | ||| ||||||||
Sbjct: 120 gcagtccacgagctgctgctcggacagagacgtgaggttcttagagcggatagcgttgat 61
Query: 825 gccctccacggcggcgatcgtcgagaacgcccagcagctaccgcattggccctggtcctt 884
|||||||||||| |||||||||||||| ||||||||||| ||||| || || ||||||||
Sbjct: 60 gccctccacggccgcgatcgtcgagaaagcccagcagctgccgcactgcccttggtcctt 1
>gb|CA026404.1|CA026404 HZ55N04r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ55N04
5-PRIME, mRNA sequence
Length = 451
Score = 268 bits (135), Expect = 4e-070
Identities = 299/351 (85%), Gaps = 2/351 (0%)
Strand = Plus / Minus
Query: 271 gggttgggcgaggtcttgacggggtaggatgcctccatggcgatgccgcagtgtccctcc 330
||||||| ||||||||||| |||||||| |||||||||||||| |||||| | || |||
Sbjct: 402 gggttggctgaggtcttgactgggtaggacgcctccatggcgatcccgcagagcccttcc 343
Query: 331 ttggcggccacgtcgcgcgccatgcggatgtaccccttctcgccccactcggggccccac 390
||| | ||| |||||| |||||||||||| |||||||| |||||||| || |||||
Sbjct: 342 ttgtccttcacatcgcgcttcatgcggatgtatcccttctcaccccactccggcccccat 283
Query: 391 gagttcttgaccagccagtacttggtgccgtccgcggtgaccccgtagccgaccgccgcg 450
||||| || || | ||| ||||||||||||||| ||||| ||||| || ||||||||
Sbjct: 282 gagtttttcacgatccaatacttggtgccgtccacggtggtgccgtaccccaccgccgcc 223
Query: 451 acgccgtggtccagctccgtcccgcacctgccggagaagaccccctcggagtagaactgg 510
||||| ||||||||||||||||||||| |||| | ||| |||||||| ||||||||||||
Sbjct: 222 acgccatggtccagctccgtcccgcacttgcccgcgaacaccccctccgagtagaactgg 163
Query: 511 aagtgcgagccgctggcctcgatggcgacggacacgggctggtgc-gccaccgccttctt 569
|||||||| ||||| ||||||||||| |||| ||| |||| |||| ||||||||||||||
Sbjct: 162 aagtgcgacccgctagcctcgatggccacggccactggct-gtgcagccaccgccttctt 104
Query: 570 gagcgccgactcgtcgttggccggcacgtcctcgtagccgtcgatggtgac 620
||||| | ||||||||||| ||||||||||| || ||||||||||||||
Sbjct: 103 cagcgcggtttcgtcgttggcgggcacgtcctcatacccgtcgatggtgac 53
>gb|CA024413.1|CA024413 HZ49D23r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ49D23
5-PRIME, mRNA sequence
Length = 452
Score = 264 bits (133), Expect = 6e-069
Identities = 199/221 (90%)
Strand = Plus / Minus
Query: 697 tgcttggcgatgtactggaacgcgtagtccatgaggcccccgttgcagccggcgttggcc 756
|||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| |
Sbjct: 449 tgcttggcgatgtactggaaggcgtagtccatgaggccgccgttgcagccggcgttggac 390
Query: 757 ttggtgtcgcagtccaccagctgctgctccgacagcgacgtcaggttcttggtcttgatc 816
|| |||||||||||||| ||||||||||| ||||| ||||| |||||||| || |||
Sbjct: 389 ttcgtgtcgcagtccacgagctgctgctcggacagagacgtgaggttcttagtgcggata 330
Query: 817 gcgttgatgccctccacggcggcgatcgtcgagaacgcccagcagctaccgcattggccc 876
|||||||||||||||||||| |||||||||||||| ||||||||||| ||||| || |||
Sbjct: 329 gcgttgatgccctccacggccgcgatcgtcgagaaagcccagcagctgccgcactgcccc 270
Query: 877 tggtccttgacgtcggtgacagcgcccttctgcctccagtc 917
|||||||||||| |||| || ||||||||||||| ||||||
Sbjct: 269 tggtccttgacggcggtcaccgcgcccttctgccgccagtc 229
Score = 117 bits (59), Expect = 8e-025
Identities = 71/75 (94%)
Strand = Plus / Minus
Query: 1039 cggaactcgtcggcggtcatgtcgccgaagcggttgaggcggagcttgtagggctcgtcc 1098
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 113 cggaactcgtcggcggtcatgtcgccgaagcggttgaggcggagcttgtagggggcgtcg 54
Query: 1099 cggcggttgaactcg 1113
| |||||||||||||
Sbjct: 53 ccgcggttgaactcg 39
>gb|AL501368.1|AL501368 AL501368 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW03P10u 3', mRNA sequence
Length = 623
Score = 252 bits (127), Expect = 2e-065
Identities = 294/347 (84%), Gaps = 2/347 (0%)
Strand = Plus / Plus
Query: 271 gggttgggcgaggtcttgacggggtaggatgcctccatggcgatgccgcagtgtccctcc 330
||||||| ||||||||||| |||||||| |||||||||||||| |||||| | || |||
Sbjct: 175 gggttggctgaggtcttgactgggtaggacgcctccatggcgatcccgcagagcccttcc 234
Query: 331 ttggcggccacgtcgcgcgccatgcggatgtaccccttctcgccccactcggggccccac 390
||| | ||| |||||| |||||||||||| |||||||| |||||||| || |||||
Sbjct: 235 ttgtccttcacatcgcgcttcatgcggatgtatcccttctcaccccactccggcccccat 294
Query: 391 gagttcttgaccagccagtacttggtgccgtccgcggtgaccccgtagccgaccgccgcg 450
||||| || || | ||| ||||||||||||||| ||||| ||||| || ||||||||
Sbjct: 295 gagtttttcacgatccaatacttggtgccgtccacggtggtgccgtaccccaccgccgcc 354
Query: 451 acgccgtggtccagctccgtcccgcacctgccggagaagaccccctcggagtagaactgg 510
||||| ||||||||||||||||||||| |||| | ||| |||||||| ||||||||||||
Sbjct: 355 acgccatggtccagctccgtcccgcacttgcccgcgaacaccccctccgagtagaactgg 414
Query: 511 aagtgcgagccgctggcctcgatggcgacggacacgggctggtgc-gccaccgccttctt 569
|||||||| ||||| |||||||||| |||| ||| |||| |||| ||||||||||||||
Sbjct: 415 aagtgcgacccgctagcctcgatggtcacggccactggct-gtgcagccaccgccttctt 473
Query: 570 gagcgccgactcgtcgttggccggcacgtcctcgtagccgtcgatgg 616
||||| | ||||||||||| ||||||||||| || ||||||||||
Sbjct: 474 cagcgcgggttcgtcgttggcgggcacgtcctcatacccgtcgatgg 520
>gb|CB884128.1|CB884128 HZ55P09r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ55P09
5-PRIME, mRNA sequence
Length = 510
Score = 248 bits (125), Expect = 3e-064
Identities = 197/221 (89%)
Strand = Plus / Minus
Query: 697 tgcttggcgatgtactggaacgcgtagtccatgaggcccccgttgcagccggcgttggcc 756
|||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| |
Sbjct: 509 tgcttggcgatgtactggaaggcgtagtccatgaggccgccgttgcagccggcgttggac 450
Query: 757 ttggtgtcgcagtccaccagctgctgctccgacagcgacgtcaggttcttggtcttgatc 816
|| |||||||||||||| ||||||||||| ||||| ||||| |||||||| | |||
Sbjct: 449 ttcgtgtcgcagtccacgagctgctgctcggacagagacgtgaggttcttagagcggata 390
Query: 817 gcgttgatgccctccacggcggcgatcgtcgagaacgcccagcagctaccgcattggccc 876
|||||||||||||||||||| |||||||||||||| ||||||||||| ||||| || ||
Sbjct: 389 gcgttgatgccctccacggccgcgatcgtcgagaaagcccagcagctgccgcactgccct 330
Query: 877 tggtccttgacgtcggtgacagcgcccttctgcctccagtc 917
|||||||||||| |||| || ||||||||||||| ||||||
Sbjct: 329 tggtccttgacggcggtcaccgcgcccttctgccgccagtc 289
Score = 123 bits (62), Expect = 1e-026
Identities = 104/118 (88%)
Strand = Plus / Minus
Query: 996 gaacatgcggtggtgcgcgaccctggagcccgcgtagtggcgtcggaactcgtcggcggt 1055
||||||||||||||| | ||| | |||| |||||| ||| |||||||||||||||||
Sbjct: 216 gaacatgcggtggtgagagacgcgggaggaggcgtaggcgcggcggaactcgtcggcggt 157
Query: 1056 catgtcgccgaagcggttgaggcggagcttgtagggctcgtcccggcggttgaactcg 1113
|||||||||||||||||||||||||||||||||||| |||| | |||||||||||||
Sbjct: 156 catgtcgccgaagcggttgaggcggagcttgtagggggcgtcaccgcggttgaactcg 99
>gb|CA028123.1|CA028123 HZ61B02r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ61B02
5-PRIME, mRNA sequence
Length = 693
Score = 218 bits (110), Expect = 3e-055
Identities = 190/214 (88%), Gaps = 2/214 (0%)
Strand = Plus / Minus
Query: 706 atgtactggaacgcgtagtccatgaggcccccgttgcagccggcgttggccttggtgtcg 765
||||||||||| ||||||||||||||||| ||||||||||||||||||| ||| ||||||
Sbjct: 693 atgtactggaaggcgtagtccatgaggccgccgttgcagccggcgttggacttcgtgtcg 634
Query: 766 cagtccaccagctgctgctccgacagcgacgtcaggttcttggtcttgatcgcgttgatg 825
|||||||| ||||||||||| ||||| ||||| |||||||| || ||| |||||||||
Sbjct: 633 cagtccacgagctgctgctcggacagagacgtgaggttcttagtgcggatagcgttgatg 574
Query: 826 ccctccac-ggcggcgatcgtcgagaacgcccagcagctaccgcattggccctggtcctt 884
|||||||| ||| |||||||||||||| ||||||||||| ||||| || |||||||||||
Sbjct: 573 ccctccacgggccgcgatcgtcgagaaagcccagcagctgccgcactgcccctggtcctt 514
Query: 885 gacgtcggtgacagcg-cccttctgcctccagtc 917
|||| |||| || ||| |||||||||| ||||||
Sbjct: 513 gacggcggtcaccgcgncccttctgccgccagtc 480
Score = 117 bits (59), Expect = 8e-025
Identities = 71/75 (94%)
Strand = Plus / Minus
Query: 1039 cggaactcgtcggcggtcatgtcgccgaagcggttgaggcggagcttgtagggctcgtcc 1098
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 364 cggaactcgtcggcggtcatgtcgccgaagcggttgaggcggagcttgtagggggcgtcg 305
Query: 1099 cggcggttgaactcg 1113
| |||||||||||||
Sbjct: 304 ccgcggttgaactcg 290
>gb|BM096938.2|BM096938 EBpi07_SQ001_N17_R pistil, 12 DPA, no treatment, cv Optic, EBpi07
Hordeum vulgare subsp. vulgare cDNA clone
EBpi07_SQ001_N17 5', mRNA sequence
Length = 454
Score = 188 bits (95), Expect = 3e-046
Identities = 229/271 (84%), Gaps = 2/271 (0%)
Strand = Plus / Minus
Query: 351 catgcggatgtaccccttctcgccccactcggggccccacgagttcttgaccagccagta 410
|||||||||||| |||||||| |||||||| || ||||| ||||| || || | ||| ||
Sbjct: 453 catgcggatgtatcccttctcaccccactccggcccccatgagtttttcacgatccaata 394
Query: 411 cttggtgccgtccgcggtgaccccgtagccgaccgccgcgacgccgtggtccagctccgt 470
||||||||||||| ||||| ||||| || |||||||| ||||| || |||||||||||
Sbjct: 393 cttggtgccgtccacggtggtgccgtaccccaccgccgccacgccatgatccagctccgt 334
Query: 471 cccgcacctgccggagaagaccccctcggagtagaactggaagtgcgagccgctggcctc 530
||||||| |||| | ||| |||||||| |||||||||||||||||||| ||||| |||||
Sbjct: 333 cccgcacttgcccgcgaacaccccctccgagtagaactggaagtgcgacccgctagcctc 274
Query: 531 gatggcgacggacacgggctggtgc-gccaccgccttcttgagcgccgactcgtcgttgg 589
|||||| ||| || || | |||| ||||||||||| || ||||| | ||||||||||
Sbjct: 273 gatggcctcggccattgggt-gtgcagccaccgccttattcagcgcggtttcgtcgttgg 215
Query: 590 ccggcacgtcctcgtagccgtcgatggtgac 620
| ||||||||||| || ||||||||||||||
Sbjct: 214 cgggcacgtcctcatacccgtcgatggtgac 184
Score = 174 bits (88), Expect = 4e-042
Identities = 124/136 (91%)
Strand = Plus / Minus
Query: 662 tgtacgggtacgcgtcctccgccgccaccccgccgtgcttggcgatgtactggaacgcgt 721
|||| ||| |||||||||| || ||||||||||| |||||||||||||||||||| ||||
Sbjct: 139 tgtaggggcacgcgtcctcggcggccaccccgccatgcttggcgatgtactggaaggcgt 80
Query: 722 agtccatgaggcccccgttgcagccggcgttggccttggtgtcgcagtccaccagctgct 781
||||||||||||| ||||||||||||||||||| ||| |||||||||||||| |||||||
Sbjct: 79 agtccatgaggccgccgttgcagccggcgttggacttcgtgtcgcagtccacgagctgct 20
Query: 782 gctccgacagcgacgt 797
|||| ||||| |||||
Sbjct: 19 gctcggacagagacgt 4
>gb|BG309012.1|BG309012 HVSMEc0001G16f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0001G16f, mRNA sequence
Length = 805
Score = 151 bits (76), Expect = 6e-035
Identities = 178/212 (83%)
Strand = Plus / Minus
Query: 706 atgtactggaacgcgtagtccatgaggcccccgttgcagccggcgttggccttggtgtcg 765
|||||||| || | ||||||||| |||||||||||||| ||||||||| |||||| |||
Sbjct: 688 atgtactgcaaggagtagtccataaggcccccgttgcacccggcgttgcacttggtttcg 629
Query: 766 cagtccaccagctgctgctccgacagcgacgtcaggttcttggtcttgatcgcgttgatg 825
|||||| | |||| |||||| ||||| |||| |||||| | | ||| |||||||||
Sbjct: 628 cagtccccgagctcctgctcggacagacacgtgaggttcctagagcggatagcgttgatg 569
Query: 826 ccctccacggcggcgatcgtcgagaacgcccagcagctaccgcattggccctggtccttg 885
|||||| |||| ||||||||||||| ||||||||||| ||||| || || |||||||||
Sbjct: 568 ccctccgcggccgcgatcgtcgagagagcccagcagctgccgcactgcccttggtccttg 509
Query: 886 acgtcggtgacagcgcccttctgcctccagtc 917
||| |||| || ||||||||||||| ||||||
Sbjct: 508 acggcggtcaccgcgcccttctgccgccagtc 477
Score = 125 bits (63), Expect = 3e-027
Identities = 72/75 (96%)
Strand = Plus / Minus
Query: 1039 cggaactcgtcggcggtcatgtcgccgaagcggttgaggcggagcttgtagggctcgtcc 1098
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 360 cggaactcgtcggcggtcatgtcgccgaagcggttgaggcggagcttgtagggggcgtcc 301
Query: 1099 cggcggttgaactcg 1113
| |||||||||||||
Sbjct: 300 ccgcggttgaactcg 286
>gb|CA024346.1|CA024346 HZ49A22r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ49A22
5-PRIME, mRNA sequence
Length = 622
Score = 149 bits (75), Expect = 2e-034
Identities = 126/143 (88%)
Strand = Plus / Minus
Query: 775 agctgctgctccgacagcgacgtcaggttcttggtcttgatcgcgttgatgccctccacg 834
||||||||||| ||||| ||||| |||||||| || ||| ||||||||||||||||||
Sbjct: 622 agctgctgctcggacagagacgtgaggttcttagtgcggatagcgttgatgccctccacg 563
Query: 835 gcggcgatcgtcgagaacgcccagcagctaccgcattggccctggtccttgacgtcggtg 894
|| |||||||||||||| ||||||||||| ||||| || ||||||||||||||| ||||
Sbjct: 562 gccgcgatcgtcgagaaagcccagcagctgccgcactgcccctggtccttgacggcggtc 503
Query: 895 acagcgcccttctgcctccagtc 917
|| ||||||||||||| ||||||
Sbjct: 502 accgcgcccttctgccgccagtc 480
Score = 117 bits (59), Expect = 8e-025
Identities = 71/75 (94%)
Strand = Plus / Minus
Query: 1039 cggaactcgtcggcggtcatgtcgccgaagcggttgaggcggagcttgtagggctcgtcc 1098
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 364 cggaactcgtcggcggtcatgtcgccgaagcggttgaggcggagcttgtagggggcgtcg 305
Query: 1099 cggcggttgaactcg 1113
| |||||||||||||
Sbjct: 304 ccgcggttgaactcg 290
>gb|CB884132.1|CB884132 HZ57N15r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ57N15
5-PRIME, mRNA sequence
Length = 425
Score = 139 bits (70), Expect = 2e-031
Identities = 130/150 (86%)
Strand = Plus / Minus
Query: 768 gtccaccagctgctgctccgacagcgacgtcaggttcttggtcttgatcgcgttgatgcc 827
|||||| ||||||||||| ||||| ||||| |||||||| | ||| |||||||||||
Sbjct: 425 gtccacgagctgctgctcggacagagacgtgaggttcttagagcggatagcgttgatgcc 366
Query: 828 ctccacggcggcgatcgtcgagaacgcccagcagctaccgcattggccctggtccttgac 887
||||||||| |||||||||||||| ||||||||||| ||||| || || |||||||||||
Sbjct: 365 ctccacggccgcgatcgtcgagaaagcccagcagctgccgcactgcccttggtccttgac 306
Query: 888 gtcggtgacagcgcccttctgcctccagtc 917
| |||| || ||||||||||||| ||||||
Sbjct: 305 ggcggtcaccgcgcccttctgccgccagtc 276
Score = 123 bits (62), Expect = 1e-026
Identities = 104/118 (88%)
Strand = Plus / Minus
Query: 996 gaacatgcggtggtgcgcgaccctggagcccgcgtagtggcgtcggaactcgtcggcggt 1055
||||||||||||||| | ||| | |||| |||||| ||| |||||||||||||||||
Sbjct: 203 gaacatgcggtggtgagagacgcgggaggaggcgtaggcgcggcggaactcgtcggcggt 144
Query: 1056 catgtcgccgaagcggttgaggcggagcttgtagggctcgtcccggcggttgaactcg 1113
|||||||||||||||||||||||||||||||||||| |||| | |||||||||||||
Sbjct: 143 catgtcgccgaagcggttgaggcggagcttgtagggggcgtcaccgcggttgaactcg 86
>emb|Z97023.1|HVZ97023 Hordeum vulgare mRNA encoding cysteine endopeptidase EP-A
Length = 1299
Score = 137 bits (69), Expect = 9e-031
Identities = 177/213 (83%)
Strand = Plus / Minus
Query: 705 gatgtactggaacgcgtagtccatgaggcccccgttgcagccggcgttggccttggtgtc 764
|||| ||||||| ||||||||||||||||| |||| |||||| |||| | ||||
Sbjct: 663 gatgaactggaaggcgtagtccatgaggccgccgtcgcagccctggttgttgacgttgtc 604
Query: 765 gcagtccaccagctgctgctccgacagcgacgtcaggttcttggtcttgatcgcgttgat 824
|||||||| |||| |||||||||||||||| ||| ||| ||| ||||| ||||||
Sbjct: 603 gcagtccatgagctcctgctccgacagcgacaccagcttccccgtcctgatcttgttgat 544
Query: 825 gccctccacggcggcgatcgtcgagaacgcccagcagctaccgcattggccctggtcctt 884
||||||||| || ||||||||||||||||||||||||| ||||| ||||| || |||||
Sbjct: 543 gccctccaccgccacgatcgtcgagaacgcccagcagctcccgcactggccttgatcctt 484
Query: 885 gacgtcggtgacagcgcccttctgcctccagtc 917
|| | ||||||| ||||||||||||| ||||||
Sbjct: 483 gatggcggtgacggcgcccttctgccgccagtc 451
Score = 83.8 bits (42), Expect = 1e-014
Identities = 183/230 (79%)
Strand = Plus / Minus
Query: 385 ccccacgagttcttgaccagccagtacttggtgccgtccgcggtgaccccgtagccgacc 444
|||||||||||||| || | |||||| |||||||| ||| || | |||||||||||
Sbjct: 986 ccccacgagttcttcacgatccagtatttggtgccatccctagtagcgccgtagccgacg 927
Query: 445 gccgcgacgccgtggtccagctccgtcccgcacctgccggagaagaccccctcggagtag 504
|| ||||| |||||||| || ||||| | ||| |||| |||||| ||||| ||||||
Sbjct: 926 gcggcgacaccgtggtcgagatccgtgctgcattctccggtgaagacaccctctgagtag 867
Query: 505 aactggaagtgcgagccgctggcctcgatggcgacggacacgggctggtgcgccaccgcc 564
|||||||| | | ||||||||| || || || || ||||||||||| || |||||
Sbjct: 866 aactggaaatcctggccgctggcgtctattgccaccgacacgggctgcccggcgaccgct 807
Query: 565 ttcttgagcgccgactcgtcgttggccggcacgtcctcgtagccgtcgat 614
|||| || || |||||||||||||| || || |||||||||||||||||
Sbjct: 806 ttctgtagagcggactcgtcgttggcggggacatcctcgtagccgtcgat 757
>gb|BM100328.1|BM100328 EBma01_SQ001_N23_R maternal, 4 DPA, no treatment, cv Optic, EBma01
Hordeum vulgare subsp. vulgare cDNA clone
EBma01_SQ001_N23 5', mRNA sequence
Length = 359
Score = 125 bits (63), Expect = 3e-027
Identities = 135/159 (84%)
Strand = Plus / Minus
Query: 271 gggttgggcgaggtcttgacggggtaggatgcctccatggcgatgccgcagtgtccctcc 330
||||||| |||||||||||||||||||| |||||||||||||| |||||| | ||||||
Sbjct: 160 gggttggttgaggtcttgacggggtaggacgcctccatggcgatcccgcagagcccctcc 101
Query: 331 ttggcggccacgtcgcgcgccatgcggatgtaccccttctcgccccactcggggccccac 390
||| | | || |||||| |||||||||||| |||||||| |||||||| || |||||
Sbjct: 100 ttgtcttctacatcgcgcttcatgcggatgtatcccttctcaccccactccggcccccat 41
Query: 391 gagttcttgaccagccagtacttggtgccgtccgcggtg 429
||||| || || | ||| ||||||||||||||| |||||
Sbjct: 40 gagtttttcacgatccaatacttggtgccgtccacggtg 2
>gb|BM373609.2|BM373609 EBma03_SQ002_B17_R maternal, 8 DPA, no treatment, cv Optic, EBma03
Hordeum vulgare subsp. vulgare cDNA clone
EBma03_SQ002_B17 5', mRNA sequence
Length = 205
Score = 123 bits (62), Expect = 1e-026
Identities = 104/118 (88%)
Strand = Plus / Minus
Query: 996 gaacatgcggtggtgcgcgaccctggagcccgcgtagtggcgtcggaactcgtcggcggt 1055
||||||||||||||| | ||| | |||| |||||| ||| |||||||||||||||||
Sbjct: 188 gaacatgcggtggtgagagacgcgggaggaggcgtaggcgcggcggaactcgtcggcggt 129
Query: 1056 catgtcgccgaagcggttgaggcggagcttgtagggctcgtcccggcggttgaactcg 1113
|||||||||||||||||||||||||||||||||||| |||| | |||||||||||||
Sbjct: 128 catgtcgccgaagcggttgaggcggagcttgtagggggcgtcgccgcggttgaactcg 71
>gb|CB884103.1|CB884103 HZ37N06r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ37N06
5-PRIME, mRNA sequence
Length = 510
Score = 123 bits (62), Expect = 1e-026
Identities = 104/118 (88%)
Strand = Plus / Minus
Query: 996 gaacatgcggtggtgcgcgaccctggagcccgcgtagtggcgtcggaactcgtcggcggt 1055
||||||||||||||| | ||| | |||| |||||| ||| |||||||||||||||||
Sbjct: 428 gaacatgcggtggtgagagacgcgggaggaggcgtaggcgcggcggaactcgtcggcggt 369
Query: 1056 catgtcgccgaagcggttgaggcggagcttgtagggctcgtcccggcggttgaactcg 1113
|||||||||||||||||||||||||||||||||||| |||| | |||||||||||||
Sbjct: 368 catgtcgccgaagcggttgaggcggagcttgtagggggcgtcaccgcggttgaactcg 311
>gb|CB884105.1|CB884105 HZ40M21r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ40M21
5-PRIME, mRNA sequence
Length = 616
Score = 123 bits (62), Expect = 1e-026
Identities = 104/118 (88%)
Strand = Plus / Minus
Query: 996 gaacatgcggtggtgcgcgaccctggagcccgcgtagtggcgtcggaactcgtcggcggt 1055
||||||||||||||| | ||| | |||| |||||| ||| |||||||||||||||||
Sbjct: 442 gaacatgcggtggtgagagacgcgggaggaggcgtaggcgcggcggaactcgtcggcggt 383
Query: 1056 catgtcgccgaagcggttgaggcggagcttgtagggctcgtcccggcggttgaactcg 1113
|||||||||||||||||||||||||||||||||||| |||| | |||||||||||||
Sbjct: 382 catgtcgccgaagcggttgaggcggagcttgtagggggcgtcaccgcggttgaactcg 325
Score = 121 bits (61), Expect = 5e-026
Identities = 91/101 (90%)
Strand = Plus / Minus
Query: 817 gcgttgatgccctccacggcggcgatcgtcgagaacgcccagcagctaccgcattggccc 876
|||||||||||||||||||| |||||||||||||| ||||||||||| ||||| || ||
Sbjct: 615 gcgttgatgccctccacggccgcgatcgtcgagaaagcccagcagctgccgcactgccct 556
Query: 877 tggtccttgacgtcggtgacagcgcccttctgcctccagtc 917
|||||||||||| |||| || ||||||||||||| ||||||
Sbjct: 555 tggtccttgacggcggtcaccgcgcccttctgccgccagtc 515
>gb|CB884108.1|CB884108 HZ43L23r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ43L23
5-PRIME, mRNA sequence
Length = 454
Score = 123 bits (62), Expect = 1e-026
Identities = 104/118 (88%)
Strand = Plus / Minus
Query: 996 gaacatgcggtggtgcgcgaccctggagcccgcgtagtggcgtcggaactcgtcggcggt 1055
||||||||||||||| | ||| | |||| |||||| ||| |||||||||||||||||
Sbjct: 444 gaacatgcggtggtgagagacgcgggaggaggcgtaggcgcggcggaactcgtcggcggt 385
Query: 1056 catgtcgccgaagcggttgaggcggagcttgtagggctcgtcccggcggttgaactcg 1113
|||||||||||||||||||||||||||||||||||| |||| | |||||||||||||
Sbjct: 384 catgtcgccgaagcggttgaggcggagcttgtagggggcgtcaccgcggttgaactcg 327
>gb|CB884109.1|CB884109 HZ45F04r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ45F04
5-PRIME, mRNA sequence
Length = 454
Score = 123 bits (62), Expect = 1e-026
Identities = 104/118 (88%)
Strand = Plus / Minus
Query: 996 gaacatgcggtggtgcgcgaccctggagcccgcgtagtggcgtcggaactcgtcggcggt 1055
||||||||||||||| | ||| | |||| |||||| ||| |||||||||||||||||
Sbjct: 442 gaacatgcggtggtgagagacgcgggaggaggcgtaggcgcggcggaactcgtcggcggt 383
Query: 1056 catgtcgccgaagcggttgaggcggagcttgtagggctcgtcccggcggttgaactcg 1113
|||||||||||||||||||||||||||||||||||| |||| | |||||||||||||
Sbjct: 382 catgtcgccgaagcggttgaggcggagcttgtagggggcgtcaccgcggttgaactcg 325
>gb|CB884116.1|CB884116 HZ50C14r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ50C14
5-PRIME, mRNA sequence
Length = 583
Score = 123 bits (62), Expect = 1e-026
Identities = 104/118 (88%)
Strand = Plus / Minus
Query: 996 gaacatgcggtggtgcgcgaccctggagcccgcgtagtggcgtcggaactcgtcggcggt 1055
||||||||||||||| | ||| | |||| |||||| ||| |||||||||||||||||
Sbjct: 433 gaacatgcggtggtgagagacgcgggaggaggcgtaggcgcggcggaactcgtcggcggt 374
Query: 1056 catgtcgccgaagcggttgaggcggagcttgtagggctcgtcccggcggttgaactcg 1113
|||||||||||||||||||||||||||||||||||| |||| | |||||||||||||
Sbjct: 373 catgtcgccgaagcggttgaggcggagcttgtagggggcgtcaccgcggttgaactcg 316
Score = 83.8 bits (42), Expect = 1e-014
Identities = 69/78 (88%)
Strand = Plus / Minus
Query: 840 gatcgtcgagaacgcccagcagctaccgcattggccctggtccttgacgtcggtgacagc 899
|||||||||||| ||||||||||| ||||| || || |||||||||||| |||| || ||
Sbjct: 583 gatcgtcgagaaagcccagcagctgccgcactgcccttggtccttgacggcggtcaccgc 524
Query: 900 gcccttctgcctccagtc 917
||||||||||| ||||||
Sbjct: 523 gcccttctgccgccagtc 506
>gb|CB884121.1|CB884121 HZ51L19r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ51L19
5-PRIME, mRNA sequence
Length = 516
Score = 123 bits (62), Expect = 1e-026
Identities = 104/118 (88%)
Strand = Plus / Minus
Query: 996 gaacatgcggtggtgcgcgaccctggagcccgcgtagtggcgtcggaactcgtcggcggt 1055
||||||||||||||| | ||| | |||| |||||| ||| |||||||||||||||||
Sbjct: 437 gaacatgcggtggtgagagacgcgggaggaggcgtaggcgcggcggaactcgtcggcggt 378
Query: 1056 catgtcgccgaagcggttgaggcggagcttgtagggctcgtcccggcggttgaactcg 1113
|||||||||||||||||||||||||||||||||||| |||| | |||||||||||||
Sbjct: 377 catgtcgccgaagcggttgaggcggagcttgtagggggcgtcaccgcggttgaactcg 320
>gb|CB884122.1|CB884122 HZ51O05r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ51O05
5-PRIME, mRNA sequence
Length = 618
Score = 123 bits (62), Expect = 1e-026
Identities = 104/118 (88%)
Strand = Plus / Minus
Query: 996 gaacatgcggtggtgcgcgaccctggagcccgcgtagtggcgtcggaactcgtcggcggt 1055
||||||||||||||| | ||| | |||| |||||| ||| |||||||||||||||||
Sbjct: 439 gaacatgcggtggtgagagacgcgggaggaggcgtaggcgcggcggaactcgtcggcggt 380
Query: 1056 catgtcgccgaagcggttgaggcggagcttgtagggctcgtcccggcggttgaactcg 1113
|||||||||||||||||||||||||||||||||||| |||| | |||||||||||||
Sbjct: 379 catgtcgccgaagcggttgaggcggagcttgtagggggcgtcaccgcggttgaactcg 322
Score = 121 bits (61), Expect = 5e-026
Identities = 91/101 (90%)
Strand = Plus / Minus
Query: 817 gcgttgatgccctccacggcggcgatcgtcgagaacgcccagcagctaccgcattggccc 876
|||||||||||||||||||| |||||||||||||| ||||||||||| ||||| || ||
Sbjct: 612 gcgttgatgccctccacggccgcgatcgtcgagaaagcccagcagctgccgcactgccct 553
Query: 877 tggtccttgacgtcggtgacagcgcccttctgcctccagtc 917
|||||||||||| |||| || ||||||||||||| ||||||
Sbjct: 552 tggtccttgacggcggtcaccgcgcccttctgccgccagtc 512
>gb|CB884137.1|CB884137 HZ59B23r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ59B23
5-PRIME, mRNA sequence
Length = 449
Score = 123 bits (62), Expect = 1e-026
Identities = 104/118 (88%)
Strand = Plus / Minus
Query: 996 gaacatgcggtggtgcgcgaccctggagcccgcgtagtggcgtcggaactcgtcggcggt 1055
||||||||||||||| | ||| | |||| |||||| ||| |||||||||||||||||
Sbjct: 437 gaacatgcggtggtgagagacgcgggaggaggcgtaggcgcggcggaactcgtcggcggt 378
Query: 1056 catgtcgccgaagcggttgaggcggagcttgtagggctcgtcccggcggttgaactcg 1113
|||||||||||||||||||||||||||||||||||| |||| | |||||||||||||
Sbjct: 377 catgtcgccgaagcggttgaggcggagcttgtagggggcgtcaccgcggttgaactcg 320
>gb|CB884146.1|CB884146 HZ64P09r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ64P09
5-PRIME, mRNA sequence
Length = 417
Score = 123 bits (62), Expect = 1e-026
Identities = 104/118 (88%)
Strand = Plus / Minus
Query: 996 gaacatgcggtggtgcgcgaccctggagcccgcgtagtggcgtcggaactcgtcggcggt 1055
||||||||||||||| | ||| | |||| |||||| ||| |||||||||||||||||
Sbjct: 287 gaacatgcggtggtgagagacgcgggaggaggcgtaggcgcggcggaactcgtcggcggt 228
Query: 1056 catgtcgccgaagcggttgaggcggagcttgtagggctcgtcccggcggttgaactcg 1113
|||||||||||||||||||||||||||||||||||| |||| | |||||||||||||
Sbjct: 227 catgtcgccgaagcggttgaggcggagcttgtagggggcgtcaccgcggttgaactcg 170
Score = 52.0 bits (26), Expect = 4e-005
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 860 agctaccgcattggccctggtccttgacgtcggtgacagcgcccttctgcctccagtc 917
|||| ||||| || || |||||||||||| |||| || ||||||||||||| ||||||
Sbjct: 417 agctgccgcactgcccttggtccttgacggcggtcaccgcgcccttctgccgccagtc 360
>gb|CB884119.1|CB884119 HZ50J09r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ50J09
5-PRIME, mRNA sequence
Length = 407
Score = 117 bits (59), Expect = 8e-025
Identities = 71/75 (94%)
Strand = Plus / Minus
Query: 1039 cggaactcgtcggcggtcatgtcgccgaagcggttgaggcggagcttgtagggctcgtcc 1098
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 390 cggaactcgtcggcggtcatgtcgccgaagcggttgaggcggagcttgtagggggcgtca 331
Query: 1099 cggcggttgaactcg 1113
| |||||||||||||
Sbjct: 330 ccgcggttgaactcg 316
>gb|CB884130.1|CB884130 HZ56J24r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ56J24
5-PRIME, mRNA sequence
Length = 407
Score = 117 bits (59), Expect = 8e-025
Identities = 71/75 (94%)
Strand = Plus / Minus
Query: 1039 cggaactcgtcggcggtcatgtcgccgaagcggttgaggcggagcttgtagggctcgtcc 1098
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 391 cggaactcgtcggcggtcatgtcgccgaagcggttgaggcggagcttgtagggggcgtca 332
Query: 1099 cggcggttgaactcg 1113
| |||||||||||||
Sbjct: 331 ccgcggttgaactcg 317
>gb|CB884135.1|CB884135 HZ58F04r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ58F04
5-PRIME, mRNA sequence
Length = 409
Score = 117 bits (59), Expect = 8e-025
Identities = 71/75 (94%)
Strand = Plus / Minus
Query: 1039 cggaactcgtcggcggtcatgtcgccgaagcggttgaggcggagcttgtagggctcgtcc 1098
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 392 cggaactcgtcggcggtcatgtcgccgaagcggttgaggcggagcttgtagggggcgtca 333
Query: 1099 cggcggttgaactcg 1113
| |||||||||||||
Sbjct: 332 ccgcggttgaactcg 318
>gb|CB884131.1|CB884131 HZ57B09r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ57B09
5-PRIME, mRNA sequence
Length = 390
Score = 113 bits (57), Expect = 1e-023
Identities = 69/73 (94%)
Strand = Plus / Minus
Query: 1041 gaactcgtcggcggtcatgtcgccgaagcggttgaggcggagcttgtagggctcgtcccg 1100
||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
Sbjct: 390 gaactcgtcggcggtcatgtcgccgaagcggttgaggcggagcttgtagggggcgtcacc 331
Query: 1101 gcggttgaactcg 1113
|||||||||||||
Sbjct: 330 gcggttgaactcg 318
>gb|CB884107.1|CB884107 HZ43B02r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ43B02
5-PRIME, mRNA sequence
Length = 411
Score = 111 bits (56), Expect = 5e-023
Identities = 70/75 (93%)
Strand = Plus / Minus
Query: 1039 cggaactcgtcggcggtcatgtcgccgaagcggttgaggcggagcttgtagggctcgtcc 1098
||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct: 394 cggaactcgtcggcggtcatgtcgccgaagcggttgaggcggagcttgtagngggcgtca 335
Query: 1099 cggcggttgaactcg 1113
| |||||||||||||
Sbjct: 334 ccgcggttgaactcg 320
>gb|BQ758058.1|BQ758058 EBes01_SQ001_O16_R embryo sac, 4-6 DPA, no treatment, cv Optic,
EBes01 Hordeum vulgare subsp. vulgare cDNA clone
EBes01_SQ001_O16 5', mRNA sequence
Length = 275
Score = 109 bits (55), Expect = 2e-022
Identities = 133/159 (83%)
Strand = Plus / Minus
Query: 271 gggttgggcgaggtcttgacggggtaggatgcctccatggcgatgccgcagtgtccctcc 330
||||||| |||||||||||||||||||| || ||||||||||| |||||| | ||||||
Sbjct: 182 gggttggttgaggtcttgacggggtaggacgcttccatggcgatcccgcagagcccctcc 123
Query: 331 ttggcggccacgtcgcgcgccatgcggatgtaccccttctcgccccactcggggccccac 390
||| | || |||||| |||||||||||| |||||||| |||||||| || |||||
Sbjct: 122 ttgtcttatacatcgcgcttcatgcggatgtatcccttctcaccccactccggcccccat 63
Query: 391 gagttcttgaccagccagtacttggtgccgtccgcggtg 429
||||| || || | ||| ||||||||||||||| |||||
Sbjct: 62 gagtttttcacgatccaatacttggtgccgtccacggtg 24
>gb|BU988225.1|BU988225 HF17A14r HF Hordeum vulgare subsp. vulgare cDNA clone HF17A14
5-PRIME, mRNA sequence
Length = 373
Score = 105 bits (53), Expect = 3e-021
Identities = 128/153 (83%)
Strand = Plus / Minus
Query: 271 gggttgggcgaggtcttgacggggtaggatgcctccatggcgatgccgcagtgtccctcc 330
||||||| ||||||||||| |||||||| |||||||||||||| |||||| | || |||
Sbjct: 157 gggttggctgaggtcttgactgggtaggacgcctccatggcgatcccgcagagcccttcc 98
Query: 331 ttggcggccacgtcgcgcgccatgcggatgtaccccttctcgccccactcggggccccac 390
||| | ||| |||||| |||||||||||| |||||||| |||||||| || |||||
Sbjct: 97 ttgtccttcacatcgcgcttcatgcggatgtatcccttctcaccccactccggcccccat 38
Query: 391 gagttcttgaccagccagtacttggtgccgtcc 423
||||| || || | ||| |||||||||||||||
Sbjct: 37 gagtttttcacgatccaatacttggtgccgtcc 5
>gb|BJ466665.1|BJ466665 BJ466665 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags33f02 3', mRNA sequence
Length = 617
Score = 99.6 bits (50), Expect = 2e-019
Identities = 146/178 (82%)
Strand = Plus / Plus
Query: 432 cccgtagccgaccgccgcgacgccgtggtccagctccgtcccgcacctgccggagaagac 491
|||||| ||||||||||| |||||||| ||||||| || |||||| ||| ||| ||
Sbjct: 292 cccgtacccgaccgccgccacgccgtgatccagctgcgcgccgcacggaccgtcgaaaac 351
Query: 492 cccctcggagtagaactggaagtgcgagccgctggcctcgatggcgacggacacgggctg 551
|||| || |||||||||||| ||| |||| |||||||||||||||||| ||||||||
Sbjct: 352 ccccccgctgtagaactggaaatgcctgccggaggcctcgatggcgacggagacgggctg 411
Query: 552 gtgcgccaccgccttcttgagcgccgactcgtcgttggccggcacgtcctcgtagccg 609
||| || | |||||| | |||||| |||||| || | |||||||||||||||||||
Sbjct: 412 gtgggcgagcgccttgatcagcgcctgctcgtccttcgtcggcacgtcctcgtagccg 469
Score = 52.0 bits (26), Expect = 4e-005
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 357 gatgtaccccttctcgccccactcggggccccacgagttctt 398
||||||||||||||||||||| | | |||||||||||||||
Sbjct: 214 gatgtaccccttctcgccccatttgccgccccacgagttctt 255
>gb|BI959700.1|BI959700 HVSMEn0020N17f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0020N17f, mRNA sequence
Length = 655
Score = 93.7 bits (47), Expect = 1e-017
Identities = 119/143 (83%)
Strand = Plus / Minus
Query: 775 agctgctgctccgacagcgacgtcaggttcttggtcttgatcgcgttgatgccctccacg 834
|||| |||||||||||||| ||||||||| ||| ||| |||||||| ||||||||
Sbjct: 549 agctcctgctccgacagcgccgtcaggttgcccgtcacgatggcgttgatcccctccacc 490
Query: 835 gcggcgatcgtcgagaacgcccagcagctaccgcattggccctggtccttgacgtcggtg 894
|| || | ||||||||| ||||||||||| ||||| || ||||||| ||| ||||| ||
Sbjct: 489 gccgccaccgtcgagaaggcccagcagctgccgcactgcccctggttcttcacgtccgtc 430
Query: 895 acagcgcccttctgcctccagtc 917
|| |||||||||| |||||||||
Sbjct: 429 accgcgcccttcttcctccagtc 407
>gb|BJ464204.1|BJ464204 BJ464204 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags33f02 5', mRNA sequence
Length = 615
Score = 93.7 bits (47), Expect = 1e-017
Identities = 119/143 (83%)
Strand = Plus / Minus
Query: 775 agctgctgctccgacagcgacgtcaggttcttggtcttgatcgcgttgatgccctccacg 834
|||| |||||||||||||| ||||||||| ||| ||| |||||||| ||||||||
Sbjct: 438 agctcctgctccgacagcgccgtcaggttgcccgtcacgatggcgttgatcccctccacc 379
Query: 835 gcggcgatcgtcgagaacgcccagcagctaccgcattggccctggtccttgacgtcggtg 894
|| || | ||||||||| ||||||||||| ||||| || ||||||| ||| ||||| ||
Sbjct: 378 gccgccaccgtcgagaaggcccagcagctgccgcactgcccctggttcttcacgtccgtc 319
Query: 895 acagcgcccttctgcctccagtc 917
|| |||||||||| |||||||||
Sbjct: 318 accgcgcccttcttcctccagtc 296
>gb|AV915782.1|AV915782 AV915782 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags15p21 5', mRNA sequence
Length = 567
Score = 89.7 bits (45), Expect = 2e-016
Identities = 93/109 (85%)
Strand = Plus / Minus
Query: 501 gtagaactggaagtgcgagccgctggcctcgatggcgacggacacgggctggtgcgccac 560
|||||||||||||||| |||| |||||||||||| ||||||||||||||||| || |
Sbjct: 315 gtagaactggaagtgcctgccggaggcctcgatggccacggacacgggctggtgggcgag 256
Query: 561 cgccttcttgagcgccgactcgtcgttggccggcacgtcctcgtagccg 609
||||| | |||||| |||||| ||||||||||| ||||||||||||
Sbjct: 255 agccttgatcagcgcctgctcgtcattggccggcacatcctcgtagccg 207
Score = 56.0 bits (28), Expect = 3e-006
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 357 gatgtaccccttctcgccccactcggggccccacgagttc 396
|||||| |||||||||||||||| || |||||||||||||
Sbjct: 462 gatgtaacccttctcgccccactgggcgccccacgagttc 423
>gb|AV920897.1|AV920897 AV920897 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags15p21 3', mRNA sequence
Length = 582
Score = 89.7 bits (45), Expect = 2e-016
Identities = 93/109 (85%)
Strand = Plus / Plus
Query: 501 gtagaactggaagtgcgagccgctggcctcgatggcgacggacacgggctggtgcgccac 560
|||||||||||||||| |||| |||||||||||| ||||||||||||||||| || |
Sbjct: 382 gtagaactggaagtgcctgccggaggcctcgatggccacggacacgggctggtgggcgag 441
Query: 561 cgccttcttgagcgccgactcgtcgttggccggcacgtcctcgtagccg 609
||||| | |||||| |||||| ||||||||||| ||||||||||||
Sbjct: 442 agccttgatcagcgcctgctcgtcattggccggcacatcctcgtagccg 490
Score = 56.0 bits (28), Expect = 3e-006
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 357 gatgtaccccttctcgccccactcggggccccacgagttc 396
|||||| |||||||||||||||| || |||||||||||||
Sbjct: 235 gatgtaacccttctcgccccactgggcgccccacgagttc 274
>gb|AV928207.1|AV928207 AV928207 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd27g05 3', mRNA sequence
Length = 618
Score = 89.7 bits (45), Expect = 2e-016
Identities = 93/109 (85%)
Strand = Plus / Plus
Query: 501 gtagaactggaagtgcgagccgctggcctcgatggcgacggacacgggctggtgcgccac 560
|||||||||||||||| |||| |||||||||||| ||||||||||||||||| || |
Sbjct: 381 gtagaactggaagtgcctgccggaggcctcgatggccacggacacgggctggtgggcgag 440
Query: 561 cgccttcttgagcgccgactcgtcgttggccggcacgtcctcgtagccg 609
||||| | |||||| |||||| ||||||||||| ||||||||||||
Sbjct: 441 agccttgatcagcgcctgctcgtcattggccggcacatcctcgtagccg 489
Score = 56.0 bits (28), Expect = 3e-006
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 357 gatgtaccccttctcgccccactcggggccccacgagttc 396
|||||| |||||||||||||||| || |||||||||||||
Sbjct: 234 gatgtaacccttctcgccccactgggcgccccacgagttc 273
>gb|AV928208.1|AV928208 AV928208 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd27g06 3', mRNA sequence
Length = 618
Score = 89.7 bits (45), Expect = 2e-016
Identities = 93/109 (85%)
Strand = Plus / Plus
Query: 501 gtagaactggaagtgcgagccgctggcctcgatggcgacggacacgggctggtgcgccac 560
|||||||||||||||| |||| |||||||||||| ||||||||||||||||| || |
Sbjct: 381 gtagaactggaagtgcctgccggaggcctcgatggccacggacacgggctggtgggcgag 440
Query: 561 cgccttcttgagcgccgactcgtcgttggccggcacgtcctcgtagccg 609
||||| | |||||| |||||| ||||||||||| ||||||||||||
Sbjct: 441 agccttgatcagcgcctgctcgtcattggccggcacatcctcgtagccg 489
Score = 56.0 bits (28), Expect = 3e-006
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 357 gatgtaccccttctcgccccactcggggccccacgagttc 396
|||||| |||||||||||||||| || |||||||||||||
Sbjct: 234 gatgtaacccttctcgccccactgggcgccccacgagttc 273
>gb|BJ468818.1|BJ468818 BJ468818 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd27g05 5', mRNA sequence
Length = 490
Score = 89.7 bits (45), Expect = 2e-016
Identities = 93/109 (85%)
Strand = Plus / Minus
Query: 501 gtagaactggaagtgcgagccgctggcctcgatggcgacggacacgggctggtgcgccac 560
|||||||||||||||| |||| |||||||||||| ||||||||||||||||| || |
Sbjct: 238 gtagaactggaagtgcctgccggaggcctcgatggccacggacacgggctggtgggcgag 179
Query: 561 cgccttcttgagcgccgactcgtcgttggccggcacgtcctcgtagccg 609
||||| | |||||| |||||| ||||||||||| ||||||||||||
Sbjct: 178 agccttgatcagcgcctgctcgtcattggccggcacatcctcgtagccg 130
Score = 56.0 bits (28), Expect = 3e-006
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 357 gatgtaccccttctcgccccactcggggccccacgagttc 396
|||||| |||||||||||||||| || |||||||||||||
Sbjct: 385 gatgtaacccttctcgccccactgggcgccccacgagttc 346
>gb|BJ468819.1|BJ468819 BJ468819 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd27g06 5', mRNA sequence
Length = 635
Score = 89.7 bits (45), Expect = 2e-016
Identities = 93/109 (85%)
Strand = Plus / Minus
Query: 501 gtagaactggaagtgcgagccgctggcctcgatggcgacggacacgggctggtgcgccac 560
|||||||||||||||| |||| |||||||||||| ||||||||||||||||| || |
Sbjct: 238 gtagaactggaagtgcctgccggaggcctcgatggccacggacacgggctggtgggcgag 179
Query: 561 cgccttcttgagcgccgactcgtcgttggccggcacgtcctcgtagccg 609
||||| | |||||| |||||| ||||||||||| ||||||||||||
Sbjct: 178 agccttgatcagcgcctgctcgtcattggccggcacatcctcgtagccg 130
Score = 56.0 bits (28), Expect = 3e-006
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 357 gatgtaccccttctcgccccactcggggccccacgagttc 396
|||||| |||||||||||||||| || |||||||||||||
Sbjct: 385 gatgtaacccttctcgccccactgggcgccccacgagttc 346
>gb|BI948633.1|BI948633 HVSMEl0010F07f Hordeum vulgare spike EST library HVcDNA0012 (Fusarium
infected) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEl0010F07f, mRNA sequence
Length = 531
Score = 87.7 bits (44), Expect = 7e-016
Identities = 74/84 (88%)
Strand = Plus / Minus
Query: 996 gaacatgcggtggtgcgcgaccctggagcccgcgtagtggcgtcggaactcgtcggcggt 1055
||||||||||||||| | ||| | |||| |||||| ||| |||||||||||||||||
Sbjct: 84 gaacatgcggtggtgagagacgcgggaggaggcgtaggcgcggcggaactcgtcggcggt 25
Query: 1056 catgtcgccgaagcggttgaggcg 1079
||||||||||||||||||||||||
Sbjct: 24 catgtcgccgaagcggttgaggcg 1
>gb|BU999912.1|BU999912 HS16O03u HS Hordeum vulgare subsp. vulgare cDNA clone HS16O03
3-PRIME, mRNA sequence
Length = 541
Score = 87.7 bits (44), Expect = 7e-016
Identities = 146/180 (81%)
Strand = Plus / Plus
Query: 385 ccccacgagttcttgaccagccagtacttggtgccgtccgcggtgaccccgtagccgacc 444
|||||||||||||| ||| ||||||| |||||||| | | |||||||| ||||||
Sbjct: 361 ccccacgagttcttcaccgtccagtacgccttgccgtcctccgacaccccgtacccgacc 420
Query: 445 gccgcgacgccgtggtccagctccgtcccgcacctgccggagaagaccccctcggagtag 504
|||| ||||||||||||||||| || || || |||| ||| |||||||||||||||
Sbjct: 421 accgccacgccgtggtccagctctgttccacattcaccggtgaacaccccctcggagtag 480
Query: 505 aactggaagtgcgagccgctggcctcgatggcgacggacacgggctggtgcgccaccgcc 564
||| ||| | ||||||||||||| ||| |||||||||||||||| ||||||||||
Sbjct: 481 aacatgaacgccttcccgctggcctcgacggccacggacacgggctggttcgccaccgcc 540
Score = 65.9 bits (33), Expect = 3e-009
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 281 aggtcttgacggggtaggatgcctccatggcgatgccgcag 321
||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 257 aggtcttgacgggataggacgcctccatggcgatgccgcag 297
>gb|CA017567.1|CA017567 HV05J07r HV Hordeum vulgare subsp. vulgare cDNA clone HV05J07
5-PRIME, mRNA sequence
Length = 417
Score = 87.7 bits (44), Expect = 7e-016
Identities = 146/180 (81%)
Strand = Plus / Minus
Query: 385 ccccacgagttcttgaccagccagtacttggtgccgtccgcggtgaccccgtagccgacc 444
|||||||||||||| ||| ||||||| |||||||| | | |||||||| ||||||
Sbjct: 376 ccccacgagttcttcaccgtccagtacgccttgccgtcctccgacaccccgtacccgacc 317
Query: 445 gccgcgacgccgtggtccagctccgtcccgcacctgccggagaagaccccctcggagtag 504
|||| ||||||||||||||||| || || || |||| ||| |||||||||||||||
Sbjct: 316 accgccacgccgtggtccagctctgttccacattcaccggtgaacaccccctcggagtag 257
Query: 505 aactggaagtgcgagccgctggcctcgatggcgacggacacgggctggtgcgccaccgcc 564
||| ||| | ||||||||||||| ||| |||||||||||||||| ||||||||||
Sbjct: 256 aacatgaacgccttcccgctggcctcgacggccacggacacgggctggttcgccaccgcc 197
>gb|CA018792.1|CA018792 HV09K16r HV Hordeum vulgare subsp. vulgare cDNA clone HV09K16
5-PRIME, mRNA sequence
Length = 631
Score = 87.7 bits (44), Expect = 7e-016
Identities = 146/180 (81%)
Strand = Plus / Minus
Query: 385 ccccacgagttcttgaccagccagtacttggtgccgtccgcggtgaccccgtagccgacc 444
|||||||||||||| ||| ||||||| |||||||| | | |||||||| ||||||
Sbjct: 535 ccccacgagttcttcaccgtccagtacgccttgccgtcctccgacaccccgtacccgacc 476
Query: 445 gccgcgacgccgtggtccagctccgtcccgcacctgccggagaagaccccctcggagtag 504
|||| ||||||||||||||||| || || || |||| ||| |||||||||||||||
Sbjct: 475 accgccacgccgtggtccagctctgttccacattcaccggtgaacaccccctcggagtag 416
Query: 505 aactggaagtgcgagccgctggcctcgatggcgacggacacgggctggtgcgccaccgcc 564
||| ||| | ||||||||||||| ||| |||||||||||||||| ||||||||||
Sbjct: 415 aacatgaacgccttcccgctggcctcgacggccacggacacgggctggttcgccaccgcc 356
Score = 56.0 bits (28), Expect = 3e-006
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 817 gcgttgatgccctccacggcggcgatcgtcgagaacgcccagcagctaccgcattggccc 876
||||||||||| ||||||| | | ||| ||||| ||||||||||| ||||| | ||||
Sbjct: 88 gcgttgatgccttccacggacaccaccgtggagaatgcccagcagctgccgcacttgccc 29
Query: 877 tggtccttgacg 888
||||||||||||
Sbjct: 28 tggtccttgacg 17
Score = 50.1 bits (25), Expect = 2e-004
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 289 acggggtaggatgcctccatggcgatgccgcag 321
||||| ||||| |||||||||||||||||||||
Sbjct: 631 acgggataggacgcctccatggcgatgccgcag 599
>gb|U19384.1|HVU19384 Hordeum vulgare cysteine proteinase EPB2 gene, complete cds
Length = 2714
Score = 87.7 bits (44), Expect = 7e-016
Identities = 146/180 (81%)
Strand = Plus / Minus
Query: 385 ccccacgagttcttgaccagccagtacttggtgccgtccgcggtgaccccgtagccgacc 444
|||||||||||||| ||| ||||||| |||||||| | | |||||||| ||||||
Sbjct: 1806 ccccacgagttcttcaccgtccagtacgccttgccgtcctctgccaccccgtacccgacc 1747
Query: 445 gccgcgacgccgtggtccagctccgtcccgcacctgccggagaagaccccctcggagtag 504
|||| ||||||||||||||||| || || || |||| ||| |||||||||||||||
Sbjct: 1746 accgccacgccgtggtccagctctgttccacattcaccggtgaacaccccctcggagtag 1687
Query: 505 aactggaagtgcgagccgctggcctcgatggcgacggacacgggctggtgcgccaccgcc 564
||| ||| | ||||||||||||| ||| |||||||||||||||| ||||||||||
Sbjct: 1686 aacatgaacgccttcccgctggcctcgacggccacggacacgggctggttcgccaccgcc 1627
Score = 77.8 bits (39), Expect = 7e-013
Identities = 90/107 (84%)
Strand = Plus / Minus
Query: 817 gcgttgatgccctccacggcggcgatcgtcgagaacgcccagcagctaccgcattggccc 876
||||||||||| ||||||| | | ||| ||||| ||||||||||| ||||| | ||||
Sbjct: 1359 gcgttgatgccttccacggacaccaccgtggagaatgcccagcagctgccgcacttgccc 1300
Query: 877 tggtccttgacgtcggtgacagcgcccttctgcctccagtcgacgga 923
|||||||||||| | || || ||||||||||||| |||||| |||||
Sbjct: 1299 tggtccttgacgcccgtcacggcgcccttctgccgccagtccacgga 1253
Score = 65.9 bits (33), Expect = 3e-009
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 281 aggtcttgacggggtaggatgcctccatggcgatgccgcag 321
||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 1910 aggtcttgacgggataggacgcctccatggcgatgccgcag 1870
Score = 46.1 bits (23), Expect = 0.002
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 1056 catgtcgccgaagcggttgaggcggag 1082
|||||||||||||||||||||| ||||
Sbjct: 1135 catgtcgccgaagcggttgaggtggag 1109
>emb|Z97021.1|HVZ97021 Hordeum vulgare gene encoding cysteine endopeptidase EP-A
Length = 2752
Score = 85.7 bits (43), Expect = 3e-015
Identities = 130/159 (81%)
Strand = Plus / Minus
Query: 705 gatgtactggaacgcgtagtccatgaggcccccgttgcagccggcgttggccttggtgtc 764
|||| ||||||| ||||||||||||||||| || | |||||| |||| | ||||
Sbjct: 1857 gatgaactggaaggcgtagtccatgaggccgccctcgcagccctggttgttgacgttgtc 1798
Query: 765 gcagtccaccagctgctgctccgacagcgacgtcaggttcttggtcttgatcgcgttgat 824
|||||||| |||| |||||||||||||||| ||| ||| ||| ||||| ||||||
Sbjct: 1797 gcagtccatgagctcctgctccgacagcgacaccagcttccccgtcctgatcttgttgat 1738
Query: 825 gccctccacggcggcgatcgtcgagaacgcccagcagct 863
||||||||| || |||||||||||||||||||||||||
Sbjct: 1737 gccctccaccgccacgatcgtcgagaacgcccagcagct 1699
Score = 58.0 bits (29), Expect = 7e-007
Identities = 98/121 (80%)
Strand = Plus / Minus
Query: 494 cctcggagtagaactggaagtgcgagccgctggcctcgatggcgacggacacgggctggt 553
|||| |||||||||||||| | | ||||||||| || || || || |||||||||||
Sbjct: 2172 cctctgagtagaactggaaatcctggccgctggcgtctattgccaccgacacgggctgcc 2113
Query: 554 gcgccaccgccttcttgagcgccgactcgtcgttggccggcacgtcctcgtagccgtcga 613
|| ||||| |||| || || |||||||||||||| || || ||||||||||||||||
Sbjct: 2112 cggcgaccgctttctgtagagcggactcgtcgttggcggggacatcctcgtagccgtcga 2053
Query: 614 t 614
|
Sbjct: 2052 t 2052
Score = 54.0 bits (27), Expect = 1e-005
Identities = 48/55 (87%)
Strand = Plus / Minus
Query: 863 taccgcattggccctggtccttgacgtcggtgacagcgcccttctgcctccagtc 917
||||||| ||||| || ||||||| | ||||||| ||||||||||||| ||||||
Sbjct: 1569 taccgcactggccttgatccttgatggcggtgacggcgcccttctgccgccagtc 1515
Score = 44.1 bits (22), Expect = 0.010
Identities = 70/86 (81%)
Strand = Plus / Minus
Query: 385 ccccacgagttcttgaccagccagtacttggtgccgtccgcggtgaccccgtagccgacc 444
|||||||||||||| || | |||||| |||||||| ||| || | |||||||||||
Sbjct: 2363 ccccacgagttcttcacgatccagtatttggtgccatccctagtagcgccgtagccgacg 2304
Query: 445 gccgcgacgccgtggtccagctccgt 470
|| ||||| |||||||| || |||||
Sbjct: 2303 gcggcgacaccgtggtcgagatccgt 2278
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 183,567
Number of Sequences: 312970
Number of extensions: 183567
Number of successful extensions: 58017
Number of sequences better than 0.5: 299
Number of HSP's better than 0.5 without gapping: 297
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 57309
Number of HSP's gapped (non-prelim): 608
length of query: 1122
length of database: 175,134,539
effective HSP length: 19
effective length of query: 1103
effective length of database: 169,188,109
effective search space: 186614484227
effective search space used: 186614484227
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)