BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2619346.2.2
(1471 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BI959439.1|BI959439 HVSMEn0019K20f Hordeum vulgare rachi... 64 1e-008
gb|BQ460150.1|BQ460150 HA07B14r HA Hordeum vulgare subsp. v... 62 6e-008
gb|BM373019.2|BM373019 EBma04_SQ002_M07_R maternal, 10 DPA,... 62 6e-008
gb|BU995167.1|BU995167 HM09G20r HM Hordeum vulgare subsp. v... 62 6e-008
gb|CA025184.1|CA025184 HZ51H04r HZ Hordeum vulgare subsp. v... 62 6e-008
gb|CA031223.1|CA031223 HX09F15r HX Hordeum vulgare subsp. v... 62 6e-008
gb|AV925308.1|AV925308 AV925308 K. Sato unpublished cDNA li... 60 2e-007
gb|BI957173.1|BI957173 HVSMEn0007P02f Hordeum vulgare rachi... 58 9e-007
gb|BF064955.2|BF064955 HV_CEb0022B23f Hordeum vulgare seedl... 58 9e-007
gb|BF627515.3|BF627515 HVSMEb0005B01f Hordeum vulgare seedl... 58 9e-007
gb|AV914673.1|AV914673 AV914673 K. Sato unpublished cDNA li... 58 9e-007
gb|BM817195.1|BM817195 HC03E10_T3.ab1 HC Hordeum vulgare su... 58 9e-007
gb|BI778290.2|BI778290 EBro07_SQ002_M10_R root, 3 week, red... 58 9e-007
gb|BU995464.1|BU995464 HM10F12r HM Hordeum vulgare subsp. v... 58 9e-007
gb|CB875789.1|CB875789 HX09F15w HX Hordeum vulgare subsp. v... 58 9e-007
gb|BI959527.1|BI959527 HVSMEn0020A21f Hordeum vulgare rachi... 56 3e-006
gb|AV915377.1|AV915377 AV915377 K. Sato unpublished cDNA li... 56 3e-006
gb|AV923369.1|AV923369 AV923369 K. Sato unpublished cDNA li... 56 3e-006
gb|AV928555.1|AV928555 AV928555 K. Sato unpublished cDNA li... 56 3e-006
gb|BJ447901.1|BJ447901 BJ447901 K. Sato unpublished cDNA li... 56 3e-006
gb|BJ469217.1|BJ469217 BJ469217 K. Sato unpublished cDNA li... 56 3e-006
gb|BQ766471.1|BQ766471 EBro08_SQ006_L02_R root, 3 week, dro... 56 3e-006
emb|AJ234401.1|HVU234401 Hordeum vulgare partial mRNA; clon... 56 3e-006
gb|AL499815.1|AL499815 AL499815 Hordeum vulgare Barke etiol... 54 1e-005
gb|BI958760.1|BI958760 HVSMEn0016H23f Hordeum vulgare rachi... 54 1e-005
gb|BQ134669.1|BQ134669 LP30104 Lemma/palea-enriched cDNA li... 54 1e-005
gb|AV925292.1|AV925292 AV925292 K. Sato unpublished cDNA li... 52 5e-005
gb|BJ471998.1|BJ471998 BJ471998 K. Sato unpublished cDNA li... 52 5e-005
gb|BE601897.1|BE601897 HVSMEh0099O21f Hordeum vulgare 5-45 ... 50 2e-004
gb|AV912005.1|AV912005 AV912005 K. Sato unpublished cDNA li... 50 2e-004
gb|AV919628.1|AV919628 AV919628 K. Sato unpublished cDNA li... 50 2e-004
gb|BJ449584.1|BJ449584 BJ449584 K. Sato unpublished cDNA li... 50 2e-004
gb|BJ451190.1|BJ451190 BJ451190 K. Sato unpublished cDNA li... 50 2e-004
gb|BJ457011.1|BJ457011 BJ457011 K. Sato unpublished cDNA li... 50 2e-004
gb|BJ458690.1|BJ458690 BJ458690 K. Sato unpublished cDNA li... 50 2e-004
gb|BJ463208.1|BJ463208 BJ463208 K. Sato unpublished cDNA li... 50 2e-004
gb|BJ463209.1|BJ463209 BJ463209 K. Sato unpublished cDNA li... 50 2e-004
gb|BJ474421.1|BJ474421 BJ474421 K. Sato unpublished cDNA li... 50 2e-004
gb|AL505328.1|AL505328 AL505328 Hordeum vulgare Barke roots... 48 8e-004
gb|BF260578.2|BF260578 HVSMEf0022G03f Hordeum vulgare seedl... 48 8e-004
gb|BI960114.1|BI960114 HVSMEn0023E14f Hordeum vulgare rachi... 48 8e-004
gb|BJ467242.1|BJ467242 BJ467242 K. Sato unpublished cDNA li... 48 8e-004
gb|BQ761469.1|BQ761469 EBro07_SQ002_O17_R root, 3 week, red... 48 8e-004
gb|BQ763806.1|BQ763806 EBro03_SQ005_P09_R root, 3 week, wat... 48 8e-004
gb|BG299293.1|BG299293 HVSMEa0019D20f Hordeum vulgare seedl... 46 0.003
gb|BF256553.2|BF256553 HVSMEf0010F05f Hordeum vulgare seedl... 46 0.003
gb|BI953265.1|BI953265 HVSMEm0011O21f Hordeum vulgare green... 46 0.003
gb|AV909905.1|AV909905 AV909905 K. Sato unpublished cDNA li... 46 0.003
gb|AV919495.1|AV919495 AV919495 K. Sato unpublished cDNA li... 46 0.003
gb|AV919765.1|AV919765 AV919765 K. Sato unpublished cDNA li... 46 0.003
gb|AV920465.1|AV920465 AV920465 K. Sato unpublished cDNA li... 46 0.003
gb|AV928963.1|AV928963 AV928963 K. Sato unpublished cDNA li... 46 0.003
gb|AV930446.1|AV930446 AV930446 K. Sato unpublished cDNA li... 46 0.003
gb|BJ455646.1|BJ455646 BJ455646 K. Sato unpublished cDNA li... 46 0.003
gb|BJ467015.1|BJ467015 BJ467015 K. Sato unpublished cDNA li... 46 0.003
gb|BJ476004.1|BJ476004 BJ476004 K. Sato unpublished cDNA li... 46 0.003
gb|AU252400.1|AU252400 AU252400 salt-stressed barley root c... 46 0.003
gb|AL501558.1|AL501558 AL501558 Hordeum vulgare Barke roots... 44 0.013
gb|BI959063.1|BI959063 HVSMEn0017P19f Hordeum vulgare rachi... 44 0.013
gb|BF256181.3|BF256181 HVSMEf0009A06f Hordeum vulgare seedl... 44 0.013
gb|BF258072.3|BF258072 HVSMEf0014L01f Hordeum vulgare seedl... 44 0.013
gb|AL450614.1|AL450614 AL450614 Hordeum vulgare Barke etiol... 42 0.051
gb|AL499789.1|AL499789 AL499789 Hordeum vulgare Barke etiol... 42 0.051
gb|AL504940.1|AL504940 AL504940 Hordeum vulgare Barke roots... 42 0.051
gb|BF628210.2|BF628210 HVSMEb0003G21f Hordeum vulgare seedl... 42 0.051
gb|BF628592.2|BF628592 HVSMEb0006K20f Hordeum vulgare seedl... 42 0.051
gb|BF629220.2|BF629220 HVSMEb0010F23f Hordeum vulgare seedl... 42 0.051
gb|BF629452.2|BF629452 HVSMEb0012H10f Hordeum vulgare seedl... 42 0.051
gb|BF631259.2|BF631259 HVSMEb0015G20f Hordeum vulgare seedl... 42 0.051
gb|BF631638.2|BF631638 HVSMEb0016L17f Hordeum vulgare seedl... 42 0.051
gb|BI948943.1|BI948943 HVSMEl0011J21f Hordeum vulgare spike... 42 0.051
gb|BI956473.1|BI956473 HVSMEn0003J11f Hordeum vulgare rachi... 42 0.051
gb|BI957122.1|BI957122 HVSMEn0007J12f Hordeum vulgare rachi... 42 0.051
gb|BF262536.2|BF262536 HV_CEa0004E08f Hordeum vulgare seedl... 42 0.051
gb|BI958261.1|BI958261 HVSMEn0014C05f Hordeum vulgare rachi... 42 0.051
gb|BI959460.1|BI959460 HVSMEn0019M01f Hordeum vulgare rachi... 42 0.051
gb|BM928850.1|BM928850 LP20006 Lemma/palea-enriched cDNA li... 42 0.051
gb|BM442919.2|BM442919 EBro02_SQ001_N13_R root, 3 week, hyd... 42 0.051
gb|BM443374.2|BM443374 EBro02_SQ003_N09_R root, 3 week, hyd... 42 0.051
gb|BI778444.2|BI778444 EBro07_SQ003_F05_R root, 3 week, red... 42 0.051
gb|BQ762815.1|BQ762815 EBro02_SQ006_N04_R root, 3 week, hyd... 42 0.051
gb|BU972902.1|BU972902 HB23B19r BC Hordeum vulgare subsp. v... 42 0.051
gb|BU994903.1|BU994903 HM08I23r HM Hordeum vulgare subsp. v... 42 0.051
gb|CB881027.1|CB881027 HM08I23w HM Hordeum vulgare subsp. v... 42 0.051
gb|CB881611.1|CB881611 HM10F12w HM Hordeum vulgare subsp. v... 42 0.051
gb|BI953537.1|BI953537 HVSMEm0013C03f Hordeum vulgare green... 40 0.20
gb|BI957689.1|BI957689 HVSMEn0010L04f Hordeum vulgare rachi... 40 0.20
gb|BF259251.3|BF259251 HVSMEf0018I08f Hordeum vulgare seedl... 40 0.20
gb|AV911710.1|AV911710 AV911710 K. Sato unpublished cDNA li... 40 0.20
gb|AV914828.1|AV914828 AV914828 K. Sato unpublished cDNA li... 40 0.20
gb|AV919922.1|AV919922 AV919922 K. Sato unpublished cDNA li... 40 0.20
gb|AV923321.1|AV923321 AV923321 K. Sato unpublished cDNA li... 40 0.20
gb|AV928223.1|AV928223 AV928223 K. Sato unpublished cDNA li... 40 0.20
gb|AV928501.1|AV928501 AV928501 K. Sato unpublished cDNA li... 40 0.20
gb|AV932001.1|AV932001 AV932001 K. Sato unpublished cDNA li... 40 0.20
gb|AV934584.1|AV934584 AV934584 K. Sato unpublished cDNA li... 40 0.20
gb|BJ446975.1|BJ446975 BJ446975 K. Sato unpublished cDNA li... 40 0.20
gb|BJ447650.1|BJ447650 BJ447650 K. Sato unpublished cDNA li... 40 0.20
gb|BJ449599.1|BJ449599 BJ449599 K. Sato unpublished cDNA li... 40 0.20
gb|BJ450049.1|BJ450049 BJ450049 K. Sato unpublished cDNA li... 40 0.20
gb|BJ450118.1|BJ450118 BJ450118 K. Sato unpublished cDNA li... 40 0.20
gb|BJ451164.1|BJ451164 BJ451164 K. Sato unpublished cDNA li... 40 0.20
gb|BJ451780.1|BJ451780 BJ451780 K. Sato unpublished cDNA li... 40 0.20
gb|BJ452775.1|BJ452775 BJ452775 K. Sato unpublished cDNA li... 40 0.20
gb|BJ454201.1|BJ454201 BJ454201 K. Sato unpublished cDNA li... 40 0.20
gb|BJ454974.1|BJ454974 BJ454974 K. Sato unpublished cDNA li... 40 0.20
gb|BJ455402.1|BJ455402 BJ455402 K. Sato unpublished cDNA li... 40 0.20
gb|BJ457025.1|BJ457025 BJ457025 K. Sato unpublished cDNA li... 40 0.20
gb|BJ457471.1|BJ457471 BJ457471 K. Sato unpublished cDNA li... 40 0.20
gb|BJ457546.1|BJ457546 BJ457546 K. Sato unpublished cDNA li... 40 0.20
gb|BJ458669.1|BJ458669 BJ458669 K. Sato unpublished cDNA li... 40 0.20
gb|BJ459276.1|BJ459276 BJ459276 K. Sato unpublished cDNA li... 40 0.20
gb|BJ461732.1|BJ461732 BJ461732 K. Sato unpublished cDNA li... 40 0.20
gb|BJ462811.1|BJ462811 BJ462811 K. Sato unpublished cDNA li... 40 0.20
gb|BJ464630.1|BJ464630 BJ464630 K. Sato unpublished cDNA li... 40 0.20
gb|BJ467289.1|BJ467289 BJ467289 K. Sato unpublished cDNA li... 40 0.20
gb|BQ664517.1|BQ664517 HV03K17u HV Hordeum vulgare subsp. v... 40 0.20
>gb|BI959439.1|BI959439 HVSMEn0019K20f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0019K20f, mRNA sequence
Length = 661
Score = 63.9 bits (32), Expect = 1e-008
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 613 aagccagagcctaaacccgaaccgaaaccggagccaaagccagagccc 660
||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct: 534 aagccagagcctaaacccgtgccgaaaccgggaccaaagccagagccc 581
Score = 58.0 bits (29), Expect = 9e-007
Identities = 83/101 (82%)
Strand = Plus / Plus
Query: 667 aagccagagcctaagcctgagccgaaaccagaaccaaagccagagccacaaccaaagcct 726
|||||||||||||| || | ||||||||| | ||||||||||||||| | || ||||
Sbjct: 534 aagccagagcctaaacccgtgccgaaaccgggaccaaagccagagcccaagcccgagccg 593
Query: 727 gagcctaaaccagaaccaaaaccagagccaaagccagagcc 767
||| ||||| |||||||| |||||||| ||||| |||||
Sbjct: 594 atgccaaaacccgaaccaaagccagagcccaagcccgagcc 634
Score = 50.1 bits (25), Expect = 2e-004
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 829 aagccagagccaaagcctgagccgaaaccgaaaccagatccaaagccagagcc 881
||||||||||| ||||| ||||||| || ||||| || ||||||||||||||
Sbjct: 570 aagccagagcccaagcccgagccgatgccaaaacccgaaccaaagccagagcc 622
Score = 46.1 bits (23), Expect = 0.003
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 910 ccaaaaccagagccaaagccagagcctaagcccga 944
|||||||| || |||||||||||||| ||||||||
Sbjct: 597 ccaaaacccgaaccaaagccagagcccaagcccga 631
Score = 46.1 bits (23), Expect = 0.003
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 742 ccaaaaccagagccaaagccagagcctaagcccga 776
|||||||| || |||||||||||||| ||||||||
Sbjct: 597 ccaaaacccgaaccaaagccagagcccaagcccga 631
Score = 46.1 bits (23), Expect = 0.003
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 547 aagccagagcctaaacccaaaccgaaaccagagccaaagccagagcc 593
|||||||||||||||||| |||||||| | ||||||||||||||
Sbjct: 534 aagccagagcctaaacccgtgccgaaaccgggaccaaagccagagcc 580
Score = 42.1 bits (21), Expect = 0.051
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 823 gaacctaagccagagccaaagcctgagccgaaaccgaaacc 863
||||| ||||||||||| ||||| ||||||| ||||||||
Sbjct: 606 gaaccaaagccagagcccaagcccgagccgatgccgaaacc 646
Score = 42.1 bits (21), Expect = 0.051
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 448 cccgaacctaagccagagcctaagcccga 476
|||||||| ||||||||||| ||||||||
Sbjct: 603 cccgaaccaaagccagagcccaagcccga 631
Score = 42.1 bits (21), Expect = 0.051
Identities = 72/89 (80%)
Strand = Plus / Plus
Query: 925 aagccagagcctaagcccgaaccaaaaccaaagccaaagcctgagcctaaacccgaacca 984
|||||||||||||| |||| || ||||| |||||||| ||||| || ||||| ||
Sbjct: 534 aagccagagcctaaacccgtgccgaaaccgggaccaaagccagagcccaagcccgagccg 593
Query: 985 agaccagaaccagaaccaaagccagagcc 1013
| ||| |||| |||||||||||||||||
Sbjct: 594 atgccaaaacccgaaccaaagccagagcc 622
Score = 42.1 bits (21), Expect = 0.051
Identities = 54/65 (83%)
Strand = Plus / Plus
Query: 691 aaaccagaaccaaagccagagccacaaccaaagcctgagcctaaaccagaaccaaaacca 750
||||||||||| || || ||||| |||| ||||| ||||||||||||||| |||||
Sbjct: 423 aaaccagaaccgaaacctgagcccaaacctgagcctatgcctaaaccagaaccgaaacct 482
Query: 751 gagcc 755
|||||
Sbjct: 483 gagcc 487
Score = 42.1 bits (21), Expect = 0.051
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 729 gcctaaaccagaaccaaaaccagagccaaagccagagccta 769
||||||||||||||| ||||| ||||| || || |||||||
Sbjct: 419 gcctaaaccagaaccgaaacctgagcccaaacctgagccta 459
Score = 40.1 bits (20), Expect = 0.20
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 772 cccgaaccaaaaccagagccaaagcctgagcc 803
||||||||||| |||||||| ||||| |||||
Sbjct: 603 cccgaaccaaagccagagcccaagcccgagcc 634
Score = 40.1 bits (20), Expect = 0.20
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1093 aaacccgaaccaaaaccagagccc 1116
|||||||||||||| |||||||||
Sbjct: 600 aaacccgaaccaaagccagagccc 623
Score = 40.1 bits (20), Expect = 0.20
Identities = 47/56 (83%)
Strand = Plus / Plus
Query: 889 aagccagagcctaagccagaaccaaaaccagagccaaagccagagcctaagcccga 944
|||||||||||||| || | || ||||| | |||||||||||||| ||||||||
Sbjct: 534 aagccagagcctaaacccgtgccgaaaccgggaccaaagccagagcccaagcccga 589
Score = 40.1 bits (20), Expect = 0.20
Identities = 47/56 (83%)
Strand = Plus / Plus
Query: 721 aagcctgagcctaaaccagaaccaaaaccagagccaaagccagagcctaagcccga 776
||||| ||||||||||| | || ||||| | |||||||||||||| ||||||||
Sbjct: 534 aagccagagcctaaacccgtgccgaaaccgggaccaaagccagagcccaagcccga 589
>gb|BQ460150.1|BQ460150 HA07B14r HA Hordeum vulgare subsp. vulgare cDNA clone HA07B14
5-PRIME, mRNA sequence
Length = 622
Score = 61.9 bits (31), Expect = 6e-008
Identities = 75/89 (84%), Gaps = 3/89 (3%)
Strand = Plus / Plus
Query: 508 ccaaaaccagagcctaagccagagcataaacctgagccaa---agccagagcctaaaccc 564
|||||||| || || |||||||||| ||||| ||||||| ||||||||||||||||
Sbjct: 504 ccaaaacctgaaccaaagccagagcccaaacccgagccaatgaagccagagcctaaaccg 563
Query: 565 aaaccgaaaccagagccaaagccagagcc 593
| |||||||| || ||||||||||||||
Sbjct: 564 atgccgaaaccggaaccaaagccagagcc 592
Score = 56.0 bits (28), Expect = 3e-006
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 613 aagccagagcctaaacccgaaccgaaaccggagccaaagccagagccc 660
||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 546 aagccagagcctaaaccgatgccgaaaccggaaccaaagccagagccc 593
Score = 54.0 bits (27), Expect = 1e-005
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 667 aagccagagcctaagcctgagccgaaaccagaaccaaagccagagcc 713
|||||||||||||| || ||||||||| |||||||||||||||||
Sbjct: 546 aagccagagcctaaaccgatgccgaaaccggaaccaaagccagagcc 592
Score = 54.0 bits (27), Expect = 1e-005
Identities = 66/79 (83%)
Strand = Plus / Plus
Query: 613 aagccagagcctaaacccgaaccgaaaccggagccaaagccagagccccaacctaagcca 672
||||||||||| || || ||||| || |||||||| | |||| ||||| | |||||||||
Sbjct: 351 aagccagagcccaagccggaacccaagccggagccgatgccaaagcccgagcctaagcca 410
Query: 673 gagcctaagcctgagccga 691
|| || ||||| |||||||
Sbjct: 411 gaacccaagcccgagccga 429
Score = 46.1 bits (23), Expect = 0.003
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 495 gccaaaacctgaaccaaaaccagagcc 521
|||||||||||||||||| ||||||||
Sbjct: 503 gccaaaacctgaaccaaagccagagcc 529
Score = 44.1 bits (22), Expect = 0.013
Identities = 64/78 (82%)
Strand = Plus / Plus
Query: 555 gcctaaacccaaaccgaaaccagagccaaagccagagccacaaccaaaaccagagcctaa 614
||||||||| |||||||||| ||||| || || ||||| |||||||| || || ||
Sbjct: 461 gcctaaaccagaaccgaaacctgagcccaaacctgagcccatgccaaaacctgaaccaaa 520
Query: 615 gccagagcctaaacccga 632
||||||||| ||||||||
Sbjct: 521 gccagagcccaaacccga 538
Score = 44.1 bits (22), Expect = 0.013
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 886 ccaaagccagagcctaagccagaacc 911
|||||||| |||||||||||||||||
Sbjct: 390 ccaaagcccgagcctaagccagaacc 415
Score = 42.1 bits (21), Expect = 0.051
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 823 gaacctaagccagagccaaagcctgagccgaaaccgaaacc 863
||||| ||||||||||| ||||| ||||||| ||||||||
Sbjct: 576 gaaccaaagccagagcccaagcccgagccgatgccgaaacc 616
Score = 40.1 bits (20), Expect = 0.20
Identities = 47/56 (83%)
Strand = Plus / Plus
Query: 889 aagccagagcctaagccagaaccaaaaccagagccaaagccagagcctaagcccga 944
|||||||||||||| || || ||||| || |||||||||||||| ||||||||
Sbjct: 546 aagccagagcctaaaccgatgccgaaaccggaaccaaagccagagcccaagcccga 601
Score = 40.1 bits (20), Expect = 0.20
Identities = 47/56 (83%)
Strand = Plus / Plus
Query: 721 aagcctgagcctaaaccagaaccaaaaccagagccaaagccagagcctaagcccga 776
||||| ||||||||||| || ||||| || |||||||||||||| ||||||||
Sbjct: 546 aagccagagcctaaaccgatgccgaaaccggaaccaaagccagagcccaagcccga 601
Score = 40.1 bits (20), Expect = 0.20
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 992 aaccagaaccaaagccagagcctaaacc 1019
|||| ||||||||||||||||| |||||
Sbjct: 508 aacctgaaccaaagccagagcccaaacc 535
Score = 40.1 bits (20), Expect = 0.20
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 910 ccaaaaccagagccaaagccagagcctaagcccgaaccaa 949
|||||||| || |||||||||||||| || ||||| ||||
Sbjct: 504 ccaaaacctgaaccaaagccagagcccaaacccgagccaa 543
Score = 40.1 bits (20), Expect = 0.20
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 742 ccaaaaccagagccaaagccagagcctaagcccgaaccaa 781
|||||||| || |||||||||||||| || ||||| ||||
Sbjct: 504 ccaaaacctgaaccaaagccagagcccaaacccgagccaa 543
Score = 40.1 bits (20), Expect = 0.20
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 621 gcctaaacccgaaccgaaaccggagccaaagccagagccc 660
||||||||| ||||||||||| ||||| || || ||||||
Sbjct: 461 gcctaaaccagaaccgaaacctgagcccaaacctgagccc 500
Score = 40.1 bits (20), Expect = 0.20
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 445 aagcccgaacctaagccagagcctaagcccga 476
|||||||| ||||||||||| || ||||||||
Sbjct: 393 aagcccgagcctaagccagaacccaagcccga 424
>gb|BM373019.2|BM373019 EBma04_SQ002_M07_R maternal, 10 DPA, no treatment, cv Optic, EBma04
Hordeum vulgare subsp. vulgare cDNA clone
EBma04_SQ002_M07 5', mRNA sequence
Length = 625
Score = 61.9 bits (31), Expect = 6e-008
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 823 gaacctaagccagagccaaagcctgagccgaaaccgaaaccagatccaaagccagagcc 881
||||| ||||||||||| ||||| ||||||| |||||||| || ||||||||||||||
Sbjct: 72 gaaccaaagccagagcccaagcccgagccgatgccgaaaccggaaccaaagccagagcc 130
Score = 61.9 bits (31), Expect = 6e-008
Identities = 169/215 (78%)
Strand = Plus / Plus
Query: 667 aagccagagcctaagcctgagccgaaaccagaaccaaagccagagccacaaccaaagcct 726
|||||||||||||| || ||||||||| ||||||||||||||||| | || ||||
Sbjct: 42 aagccagagcctaaaccgatgccgaaaccggaaccaaagccagagcccaagcccgagccg 101
Query: 727 gagcctaaaccagaaccaaaaccagagccaaagccagagcctaagcccgaaccaaaacca 786
||| ||||| |||||||| |||||||| ||||| ||||| | ||| |||| |||||
Sbjct: 102 atgccgaaaccggaaccaaagccagagcccaagcccgagccgatgccaaaacccgaacca 161
Query: 787 gagccaaagcctgagcctaaacccgaaccaaggccagaacctaagccagagccaaagcct 846
||||| ||||| |||| | || |||| || ||||| ||||||||||| |||||
Sbjct: 162 aagccagagcctaagcccgagccgatgccaaaacccgaaccaaagccagagcccaagccc 221
Query: 847 gagccgaaaccgaaaccagatccaaagccagagcc 881
||||||| |||||||| || || ||||| |||||
Sbjct: 222 gagccgatgccgaaacccgaaccgaagcctgagcc 256
Score = 60.0 bits (30), Expect = 2e-007
Identities = 74/88 (84%), Gaps = 3/88 (3%)
Strand = Plus / Plus
Query: 509 caaaaccagagcctaagccagagcataaacctgagccaa---agccagagcctaaaccca 565
||||||| || || |||||||||| ||||| ||||||| |||||||||||||||| |
Sbjct: 1 caaaacctgaaccaaagccagagcccaaacccgagccaatgaagccagagcctaaaccga 60
Query: 566 aaccgaaaccagagccaaagccagagcc 593
|||||||| || ||||||||||||||
Sbjct: 61 tgccgaaaccggaaccaaagccagagcc 88
Score = 58.0 bits (29), Expect = 9e-007
Identities = 92/113 (81%)
Strand = Plus / Plus
Query: 793 aagcctgagcctaaacccgaaccaaggccagaacctaagccagagccaaagcctgagccg 852
||||||||||||||||| |||| || ||||| ||||||||||| ||||| ||||||
Sbjct: 399 aagcctgagcctaaaccgatgccaaaacccgaaccgaagccagagcccaagcccgagccg 458
Query: 853 aaaccgaaaccagatccaaagccagagccacaaccaaagccagagcctaagcc 905
| || ||||| || || ||||||||||| |||||||| |||||||||||
Sbjct: 459 atgccaaaacctgaacccaagccagagccgatgccaaagccggagcctaagcc 511
Score = 56.0 bits (28), Expect = 3e-006
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 673 gagcctaagcctgagccgaaaccagaaccaaagccagagccacaaccaaagcctgagcct 732
||||||||||||||||| |||||||| || | |||| | || |||||||||| |||||
Sbjct: 282 gagcctaagcctgagcccaaaccagagccgatgccaaaacccgaaccaaagccagagccc 341
Query: 733 aaaccaga 740
||||||||
Sbjct: 342 aaaccaga 349
Score = 56.0 bits (28), Expect = 3e-006
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 613 aagccagagcctaaacccgaaccgaaaccggagccaaagccagagccc 660
||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 42 aagccagagcctaaaccgatgccgaaaccggaaccaaagccagagccc 89
Score = 54.0 bits (27), Expect = 1e-005
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 910 ccaaaaccagagccaaagccagagcctaagcccga 944
|||||||| || |||||||||||||||||||||||
Sbjct: 147 ccaaaacccgaaccaaagccagagcctaagcccga 181
Score = 52.0 bits (26), Expect = 5e-005
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 495 gccaaaacctgaaccaaaaccagagcctaagccagagc 532
||||||||| |||||||| |||||||||||||| ||||
Sbjct: 146 gccaaaacccgaaccaaagccagagcctaagcccgagc 183
Score = 50.1 bits (25), Expect = 2e-004
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 691 aaaccagaaccaaagccagagccacaaccaaagcctgagcctaaaccagaaccaaaacca 750
||||| ||||||||||||||||| ||||| |||| ||| ||||| |||||||| |||
Sbjct: 318 aaacccgaaccaaagccagagcccaaaccagagccgatgccaaaacccgaaccaaagcca 377
Query: 751 gagcc 755
|||||
Sbjct: 378 gagcc 382
Score = 50.1 bits (25), Expect = 2e-004
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 448 cccgaacctaagccagagcctaagcccga 476
|||||||| ||||||||||||||||||||
Sbjct: 153 cccgaaccaaagccagagcctaagcccga 181
Score = 48.1 bits (24), Expect = 8e-004
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 721 aagcctgagcctaaaccagaaccaaaaccagagccaaagccagagcctaagcccga 776
||||||||||||||||| |||||||| || || ||||||||||| ||||||||
Sbjct: 399 aagcctgagcctaaaccgatgccaaaacccgaaccgaagccagagcccaagcccga 454
Score = 48.1 bits (24), Expect = 8e-004
Identities = 54/64 (84%)
Strand = Plus / Plus
Query: 956 agccaaagcctgagcctaaacccgaaccaagaccagaaccagaaccaaagccagagccta 1015
|||| ||||||||||| ||||| || || | ||| |||| ||||||||||||||||| |
Sbjct: 283 agcctaagcctgagcccaaaccagagccgatgccaaaacccgaaccaaagccagagccca 342
Query: 1016 aacc 1019
||||
Sbjct: 343 aacc 346
Score = 48.1 bits (24), Expect = 8e-004
Identities = 56/67 (83%), Gaps = 6/67 (8%)
Strand = Plus / Plus
Query: 884 aaccaaagccagagcctaagccagaacc------aaaaccagagccaaagccagagccta 937
|||||||||||||||||||||| || || |||||| || |||||||||||||| |
Sbjct: 157 aaccaaagccagagcctaagcccgagccgatgccaaaacccgaaccaaagccagagccca 216
Query: 938 agcccga 944
|||||||
Sbjct: 217 agcccga 223
Score = 48.1 bits (24), Expect = 8e-004
Identities = 86/107 (80%), Gaps = 6/107 (5%)
Strand = Plus / Plus
Query: 913 aaaccagagccaaagccagagcctaagcccga------accaaaaccaaagccaaagcct 966
||||| || |||||||||||||| |||||||| |||||||| | ||||||||
Sbjct: 108 aaaccggaaccaaagccagagcccaagcccgagccgatgccaaaacccgaaccaaagcca 167
Query: 967 gagcctaaacccgaaccaagaccagaaccagaaccaaagccagagcc 1013
|||||||| ||||| || | ||| |||| |||||||||||||||||
Sbjct: 168 gagcctaagcccgagccgatgccaaaacccgaaccaaagccagagcc 214
Score = 46.1 bits (23), Expect = 0.003
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 823 gaacctaagccagagccaaagcctgagccgaaaccgaaaccagatccaaagccagagcc 881
||||| ||||||||||| || || ||||||| || ||||| || ||||||||||||||
Sbjct: 324 gaaccaaagccagagcccaaaccagagccgatgccaaaacccgaaccaaagccagagcc 382
Score = 46.1 bits (23), Expect = 0.003
Identities = 65/79 (82%)
Strand = Plus / Plus
Query: 559 aaacccaaaccgaaaccagagccaaagccagagccacaaccaaaaccagagcctaagcca 618
|||||| |||| || |||||||| || |||||||| |||||||| || || ||||||
Sbjct: 318 aaacccgaaccaaagccagagcccaaaccagagccgatgccaaaacccgaaccaaagcca 377
Query: 619 gagcctaaacccgaaccga 637
||||| |||||||| ||||
Sbjct: 378 gagcccaaacccgagccga 396
Score = 46.1 bits (23), Expect = 0.003
Identities = 55/66 (83%), Gaps = 6/66 (9%)
Strand = Plus / Plus
Query: 1063 gagcctaagcctgatccaaaaccagagccta------aacccgaaccaaaaccagagccc 1116
|||||||||||||| || ||||||||||| | ||||||||||||| |||||||||
Sbjct: 282 gagcctaagcctgagcccaaaccagagccgatgccaaaacccgaaccaaagccagagccc 341
Query: 1117 caacca 1122
|||||
Sbjct: 342 aaacca 347
Score = 46.1 bits (23), Expect = 0.003
Identities = 49/58 (84%), Gaps = 6/58 (10%)
Strand = Plus / Plus
Query: 662 aacctaagccagagcctaagcctgagccg------aaaccagaaccaaagccagagcc 713
|||| ||||||||||||||||| |||||| ||||| |||||||||||||||||
Sbjct: 157 aaccaaagccagagcctaagcccgagccgatgccaaaacccgaaccaaagccagagcc 214
Score = 46.1 bits (23), Expect = 0.003
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 958 ccaaagcctgagcctaaacccgaaccaagaccagaaccagaaccaaagccagagcctaa 1016
|||||||| ||||| || ||||| || | ||| |||| ||||||||||||||||||||
Sbjct: 117 ccaaagccagagcccaagcccgagccgatgccaaaacccgaaccaaagccagagcctaa 175
Score = 46.1 bits (23), Expect = 0.003
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 634 ccgaaaccggagccaaagccagagccc 660
||||||||||| |||||||||||||||
Sbjct: 105 ccgaaaccggaaccaaagccagagccc 131
Score = 44.1 bits (22), Expect = 0.013
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 958 ccaaagcctgagcctaaacccgaaccaagaccagaaccagaaccaaagccagagcctaaa 1017
|||||||| ||||| ||||| || || | ||| |||| ||||||||||||||||| |||
Sbjct: 327 ccaaagccagagcccaaaccagagccgatgccaaaacccgaaccaaagccagagcccaaa 386
Query: 1018 cc 1019
||
Sbjct: 387 cc 388
Score = 44.1 bits (22), Expect = 0.013
Identities = 79/98 (80%)
Strand = Plus / Plus
Query: 826 cctaagccagagccaaagcctgagccgaaaccgaaaccagatccaaagccagagccacaa 885
|||||||| ||||| || || ||||||| || ||||| || |||||||||||||| ||
Sbjct: 285 cctaagcctgagcccaaaccagagccgatgccaaaacccgaaccaaagccagagcccaaa 344
Query: 886 ccaaagccagagcctaagccagaaccaaaaccagagcc 923
||| |||| ||| || || |||||||| ||||||||
Sbjct: 345 ccagagccgatgccaaaacccgaaccaaagccagagcc 382
Score = 44.1 bits (22), Expect = 0.013
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1052 aaccaaagccagagcctaagcc 1073
||||||||||||||||||||||
Sbjct: 157 aaccaaagccagagcctaagcc 178
Score = 42.1 bits (21), Expect = 0.051
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 921 gccaaagccagagcctaagcccgaaccaaaaccaaagccaaagcc 965
||||||||| |||||||||||||| || | ||||||||| ||||
Sbjct: 491 gccaaagccggagcctaagcccgagccgatgccaaagccagagcc 535
Score = 42.1 bits (21), Expect = 0.051
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 448 cccgaacctaagccagagcctaagcccga 476
|||||||| ||||||||||| ||||||||
Sbjct: 426 cccgaaccgaagccagagcccaagcccga 454
Score = 42.1 bits (21), Expect = 0.051
Identities = 54/65 (83%)
Strand = Plus / Plus
Query: 559 aaacccaaaccgaaaccagagccaaagccagagccacaaccaaaaccagagcctaagcca 618
|||||| ||||||| |||||||| ||||| ||||| |||||||| || || ||||||
Sbjct: 423 aaacccgaaccgaagccagagcccaagcccgagccgatgccaaaacctgaacccaagcca 482
Query: 619 gagcc 623
|||||
Sbjct: 483 gagcc 487
Score = 42.1 bits (21), Expect = 0.051
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1093 aaacccgaaccaaaaccagagccccaacc 1121
|||||||||||||| ||||||||| ||||
Sbjct: 360 aaacccgaaccaaagccagagcccaaacc 388
Score = 42.1 bits (21), Expect = 0.051
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 448 cccgaacctaagccagagcctaagcccga 476
|||||||| ||||||||||| ||||||||
Sbjct: 195 cccgaaccaaagccagagcccaagcccga 223
Score = 42.1 bits (21), Expect = 0.051
Identities = 54/65 (83%)
Strand = Plus / Plus
Query: 907 gaaccaaaaccagagccaaagccagagcctaagcccgaaccaaaaccaaagccaaagcct 966
|||||||| |||||||| ||||| ||||| | ||| |||| ||||||||||| |||||
Sbjct: 114 gaaccaaagccagagcccaagcccgagccgatgccaaaacccgaaccaaagccagagcct 173
Query: 967 gagcc 971
||||
Sbjct: 174 aagcc 178
Score = 42.1 bits (21), Expect = 0.051
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 497 caaaacctgaaccaaaaccagagcc 521
|||||||||||||||| ||||||||
Sbjct: 1 caaaacctgaaccaaagccagagcc 25
Score = 40.1 bits (20), Expect = 0.20
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 753 gccaaagccagagcctaagcccga 776
||||||||| ||||||||||||||
Sbjct: 491 gccaaagccggagcctaagcccga 514
Score = 40.1 bits (20), Expect = 0.20
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1093 aaacccgaaccaaaaccagagccc 1116
|||||||||||||| |||||||||
Sbjct: 192 aaacccgaaccaaagccagagccc 215
Score = 40.1 bits (20), Expect = 0.20
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 1148 aaccacagccagaacctaagcccgagcc 1175
||||| ||||||| ||||||||||||||
Sbjct: 157 aaccaaagccagagcctaagcccgagcc 184
Score = 40.1 bits (20), Expect = 0.20
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 596 aaccaaaaccagagcctaagccagagcc 623
||||||| |||||||||||||| |||||
Sbjct: 157 aaccaaagccagagcctaagcccgagcc 184
Score = 40.1 bits (20), Expect = 0.20
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 598 ccaaaaccagagcctaagccagagcctaaacccgaaccga 637
|||||||| || || |||||||||||||| ||||| ||||
Sbjct: 147 ccaaaacccgaaccaaagccagagcctaagcccgagccga 186
Score = 40.1 bits (20), Expect = 0.20
Identities = 47/56 (83%)
Strand = Plus / Plus
Query: 889 aagccagagcctaagccagaaccaaaaccagagccaaagccagagcctaagcccga 944
|||||||||||||| || || ||||| || |||||||||||||| ||||||||
Sbjct: 42 aagccagagcctaaaccgatgccgaaaccggaaccaaagccagagcccaagcccga 97
Score = 40.1 bits (20), Expect = 0.20
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 992 aaccagaaccaaagccagagcctaaacc 1019
|||| ||||||||||||||||| |||||
Sbjct: 4 aacctgaaccaaagccagagcccaaacc 31
>gb|BU995167.1|BU995167 HM09G20r HM Hordeum vulgare subsp. vulgare cDNA clone HM09G20
5-PRIME, mRNA sequence
Length = 642
Score = 61.9 bits (31), Expect = 6e-008
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 823 gaacctaagccagagccaaagcctgagccgaaaccgaaaccagatccaaagccagagcc 881
||||| ||||||||||| ||||| ||||||| |||||||| || ||||||||||||||
Sbjct: 45 gaaccaaagccagagcccaagcccgagccgatgccgaaaccggaaccaaagccagagcc 103
Score = 61.9 bits (31), Expect = 6e-008
Identities = 169/215 (78%)
Strand = Plus / Plus
Query: 667 aagccagagcctaagcctgagccgaaaccagaaccaaagccagagccacaaccaaagcct 726
|||||||||||||| || ||||||||| ||||||||||||||||| | || ||||
Sbjct: 15 aagccagagcctaaaccgatgccgaaaccggaaccaaagccagagcccaagcccgagccg 74
Query: 727 gagcctaaaccagaaccaaaaccagagccaaagccagagcctaagcccgaaccaaaacca 786
||| ||||| |||||||| |||||||| ||||| ||||| | ||| |||| |||||
Sbjct: 75 atgccgaaaccggaaccaaagccagagcccaagcccgagccgatgccaaaacccgaacca 134
Query: 787 gagccaaagcctgagcctaaacccgaaccaaggccagaacctaagccagagccaaagcct 846
||||| ||||| |||| | || |||| || ||||| ||||||||||| |||||
Sbjct: 135 aagccagagcctaagcccgagccgatgccaaaacccgaaccaaagccagagcccaagccc 194
Query: 847 gagccgaaaccgaaaccagatccaaagccagagcc 881
||||||| |||||||| || || ||||| |||||
Sbjct: 195 gagccgatgccgaaacccgaaccgaagcctgagcc 229
Score = 58.0 bits (29), Expect = 9e-007
Identities = 92/113 (81%)
Strand = Plus / Plus
Query: 793 aagcctgagcctaaacccgaaccaaggccagaacctaagccagagccaaagcctgagccg 852
||||||||||||||||| |||| || ||||| ||||||||||| ||||| ||||||
Sbjct: 372 aagcctgagcctaaaccgatgccaaaacccgaaccgaagccagagcccaagcccgagccg 431
Query: 853 aaaccgaaaccagatccaaagccagagccacaaccaaagccagagcctaagcc 905
| || ||||| || || ||||||||||| |||||||| |||||||||||
Sbjct: 432 atgccaaaacctgaacccaagccagagccgatgccaaagccggagcctaagcc 484
Score = 56.0 bits (28), Expect = 3e-006
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 673 gagcctaagcctgagccgaaaccagaaccaaagccagagccacaaccaaagcctgagcct 732
||||||||||||||||| |||||||| || | |||| | || |||||||||| |||||
Sbjct: 255 gagcctaagcctgagcccaaaccagagccgatgccaaaacccgaaccaaagccagagccc 314
Query: 733 aaaccaga 740
||||||||
Sbjct: 315 aaaccaga 322
Score = 56.0 bits (28), Expect = 3e-006
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 613 aagccagagcctaaacccgaaccgaaaccggagccaaagccagagccc 660
||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 15 aagccagagcctaaaccgatgccgaaaccggaaccaaagccagagccc 62
Score = 54.0 bits (27), Expect = 1e-005
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 910 ccaaaaccagagccaaagccagagcctaagcccga 944
|||||||| || |||||||||||||||||||||||
Sbjct: 120 ccaaaacccgaaccaaagccagagcctaagcccga 154
Score = 54.0 bits (27), Expect = 1e-005
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 547 aagccagagcctaaacccaaaccgaaaccagagccaaagccagagcc 593
||||||||||||||||| | |||||||| || ||||||||||||||
Sbjct: 15 aagccagagcctaaaccgatgccgaaaccggaaccaaagccagagcc 61
Score = 52.0 bits (26), Expect = 5e-005
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 495 gccaaaacctgaaccaaaaccagagcctaagccagagc 532
||||||||| |||||||| |||||||||||||| ||||
Sbjct: 119 gccaaaacccgaaccaaagccagagcctaagcccgagc 156
Score = 50.1 bits (25), Expect = 2e-004
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 691 aaaccagaaccaaagccagagccacaaccaaagcctgagcctaaaccagaaccaaaacca 750
||||| ||||||||||||||||| ||||| |||| ||| ||||| |||||||| |||
Sbjct: 291 aaacccgaaccaaagccagagcccaaaccagagccgatgccaaaacccgaaccaaagcca 350
Query: 751 gagcc 755
|||||
Sbjct: 351 gagcc 355
Score = 50.1 bits (25), Expect = 2e-004
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 448 cccgaacctaagccagagcctaagcccga 476
|||||||| ||||||||||||||||||||
Sbjct: 126 cccgaaccaaagccagagcctaagcccga 154
Score = 48.1 bits (24), Expect = 8e-004
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 721 aagcctgagcctaaaccagaaccaaaaccagagccaaagccagagcctaagcccga 776
||||||||||||||||| |||||||| || || ||||||||||| ||||||||
Sbjct: 372 aagcctgagcctaaaccgatgccaaaacccgaaccgaagccagagcccaagcccga 427
Score = 48.1 bits (24), Expect = 8e-004
Identities = 54/64 (84%)
Strand = Plus / Plus
Query: 956 agccaaagcctgagcctaaacccgaaccaagaccagaaccagaaccaaagccagagccta 1015
|||| ||||||||||| ||||| || || | ||| |||| ||||||||||||||||| |
Sbjct: 256 agcctaagcctgagcccaaaccagagccgatgccaaaacccgaaccaaagccagagccca 315
Query: 1016 aacc 1019
||||
Sbjct: 316 aacc 319
Score = 48.1 bits (24), Expect = 8e-004
Identities = 56/67 (83%), Gaps = 6/67 (8%)
Strand = Plus / Plus
Query: 884 aaccaaagccagagcctaagccagaacc------aaaaccagagccaaagccagagccta 937
|||||||||||||||||||||| || || |||||| || |||||||||||||| |
Sbjct: 130 aaccaaagccagagcctaagcccgagccgatgccaaaacccgaaccaaagccagagccca 189
Query: 938 agcccga 944
|||||||
Sbjct: 190 agcccga 196
Score = 48.1 bits (24), Expect = 8e-004
Identities = 86/107 (80%), Gaps = 6/107 (5%)
Strand = Plus / Plus
Query: 913 aaaccagagccaaagccagagcctaagcccga------accaaaaccaaagccaaagcct 966
||||| || |||||||||||||| |||||||| |||||||| | ||||||||
Sbjct: 81 aaaccggaaccaaagccagagcccaagcccgagccgatgccaaaacccgaaccaaagcca 140
Query: 967 gagcctaaacccgaaccaagaccagaaccagaaccaaagccagagcc 1013
|||||||| ||||| || | ||| |||| |||||||||||||||||
Sbjct: 141 gagcctaagcccgagccgatgccaaaacccgaaccaaagccagagcc 187
Score = 46.1 bits (23), Expect = 0.003
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 823 gaacctaagccagagccaaagcctgagccgaaaccgaaaccagatccaaagccagagcc 881
||||| ||||||||||| || || ||||||| || ||||| || ||||||||||||||
Sbjct: 297 gaaccaaagccagagcccaaaccagagccgatgccaaaacccgaaccaaagccagagcc 355
Score = 46.1 bits (23), Expect = 0.003
Identities = 65/79 (82%)
Strand = Plus / Plus
Query: 559 aaacccaaaccgaaaccagagccaaagccagagccacaaccaaaaccagagcctaagcca 618
|||||| |||| || |||||||| || |||||||| |||||||| || || ||||||
Sbjct: 291 aaacccgaaccaaagccagagcccaaaccagagccgatgccaaaacccgaaccaaagcca 350
Query: 619 gagcctaaacccgaaccga 637
||||| |||||||| ||||
Sbjct: 351 gagcccaaacccgagccga 369
Score = 46.1 bits (23), Expect = 0.003
Identities = 55/66 (83%), Gaps = 6/66 (9%)
Strand = Plus / Plus
Query: 1063 gagcctaagcctgatccaaaaccagagccta------aacccgaaccaaaaccagagccc 1116
|||||||||||||| || ||||||||||| | ||||||||||||| |||||||||
Sbjct: 255 gagcctaagcctgagcccaaaccagagccgatgccaaaacccgaaccaaagccagagccc 314
Query: 1117 caacca 1122
|||||
Sbjct: 315 aaacca 320
Score = 46.1 bits (23), Expect = 0.003
Identities = 49/58 (84%), Gaps = 6/58 (10%)
Strand = Plus / Plus
Query: 662 aacctaagccagagcctaagcctgagccg------aaaccagaaccaaagccagagcc 713
|||| ||||||||||||||||| |||||| ||||| |||||||||||||||||
Sbjct: 130 aaccaaagccagagcctaagcccgagccgatgccaaaacccgaaccaaagccagagcc 187
Score = 46.1 bits (23), Expect = 0.003
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 958 ccaaagcctgagcctaaacccgaaccaagaccagaaccagaaccaaagccagagcctaa 1016
|||||||| ||||| || ||||| || | ||| |||| ||||||||||||||||||||
Sbjct: 90 ccaaagccagagcccaagcccgagccgatgccaaaacccgaaccaaagccagagcctaa 148
Score = 46.1 bits (23), Expect = 0.003
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 634 ccgaaaccggagccaaagccagagccc 660
||||||||||| |||||||||||||||
Sbjct: 78 ccgaaaccggaaccaaagccagagccc 104
Score = 44.1 bits (22), Expect = 0.013
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 958 ccaaagcctgagcctaaacccgaaccaagaccagaaccagaaccaaagccagagcctaaa 1017
|||||||| ||||| ||||| || || | ||| |||| ||||||||||||||||| |||
Sbjct: 300 ccaaagccagagcccaaaccagagccgatgccaaaacccgaaccaaagccagagcccaaa 359
Query: 1018 cc 1019
||
Sbjct: 360 cc 361
Score = 44.1 bits (22), Expect = 0.013
Identities = 79/98 (80%)
Strand = Plus / Plus
Query: 826 cctaagccagagccaaagcctgagccgaaaccgaaaccagatccaaagccagagccacaa 885
|||||||| ||||| || || ||||||| || ||||| || |||||||||||||| ||
Sbjct: 258 cctaagcctgagcccaaaccagagccgatgccaaaacccgaaccaaagccagagcccaaa 317
Query: 886 ccaaagccagagcctaagccagaaccaaaaccagagcc 923
||| |||| ||| || || |||||||| ||||||||
Sbjct: 318 ccagagccgatgccaaaacccgaaccaaagccagagcc 355
Score = 44.1 bits (22), Expect = 0.013
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1052 aaccaaagccagagcctaagcc 1073
||||||||||||||||||||||
Sbjct: 130 aaccaaagccagagcctaagcc 151
Score = 42.1 bits (21), Expect = 0.051
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 921 gccaaagccagagcctaagcccgaaccaaaaccaaagccaaagcc 965
||||||||| |||||||||||||| || | ||||||||| ||||
Sbjct: 464 gccaaagccggagcctaagcccgagccgatgccaaagccagagcc 508
Score = 42.1 bits (21), Expect = 0.051
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 448 cccgaacctaagccagagcctaagcccga 476
|||||||| ||||||||||| ||||||||
Sbjct: 399 cccgaaccgaagccagagcccaagcccga 427
Score = 42.1 bits (21), Expect = 0.051
Identities = 54/65 (83%)
Strand = Plus / Plus
Query: 559 aaacccaaaccgaaaccagagccaaagccagagccacaaccaaaaccagagcctaagcca 618
|||||| ||||||| |||||||| ||||| ||||| |||||||| || || ||||||
Sbjct: 396 aaacccgaaccgaagccagagcccaagcccgagccgatgccaaaacctgaacccaagcca 455
Query: 619 gagcc 623
|||||
Sbjct: 456 gagcc 460
Score = 42.1 bits (21), Expect = 0.051
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1093 aaacccgaaccaaaaccagagccccaacc 1121
|||||||||||||| ||||||||| ||||
Sbjct: 333 aaacccgaaccaaagccagagcccaaacc 361
Score = 42.1 bits (21), Expect = 0.051
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 448 cccgaacctaagccagagcctaagcccga 476
|||||||| ||||||||||| ||||||||
Sbjct: 168 cccgaaccaaagccagagcccaagcccga 196
Score = 42.1 bits (21), Expect = 0.051
Identities = 54/65 (83%)
Strand = Plus / Plus
Query: 907 gaaccaaaaccagagccaaagccagagcctaagcccgaaccaaaaccaaagccaaagcct 966
|||||||| |||||||| ||||| ||||| | ||| |||| ||||||||||| |||||
Sbjct: 87 gaaccaaagccagagcccaagcccgagccgatgccaaaacccgaaccaaagccagagcct 146
Query: 967 gagcc 971
||||
Sbjct: 147 aagcc 151
Score = 40.1 bits (20), Expect = 0.20
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 753 gccaaagccagagcctaagcccga 776
||||||||| ||||||||||||||
Sbjct: 464 gccaaagccggagcctaagcccga 487
Score = 40.1 bits (20), Expect = 0.20
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1093 aaacccgaaccaaaaccagagccc 1116
|||||||||||||| |||||||||
Sbjct: 165 aaacccgaaccaaagccagagccc 188
Score = 40.1 bits (20), Expect = 0.20
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 1148 aaccacagccagaacctaagcccgagcc 1175
||||| ||||||| ||||||||||||||
Sbjct: 130 aaccaaagccagagcctaagcccgagcc 157
Score = 40.1 bits (20), Expect = 0.20
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 596 aaccaaaaccagagcctaagccagagcc 623
||||||| |||||||||||||| |||||
Sbjct: 130 aaccaaagccagagcctaagcccgagcc 157
Score = 40.1 bits (20), Expect = 0.20
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 598 ccaaaaccagagcctaagccagagcctaaacccgaaccga 637
|||||||| || || |||||||||||||| ||||| ||||
Sbjct: 120 ccaaaacccgaaccaaagccagagcctaagcccgagccga 159
Score = 40.1 bits (20), Expect = 0.20
Identities = 47/56 (83%)
Strand = Plus / Plus
Query: 889 aagccagagcctaagccagaaccaaaaccagagccaaagccagagcctaagcccga 944
|||||||||||||| || || ||||| || |||||||||||||| ||||||||
Sbjct: 15 aagccagagcctaaaccgatgccgaaaccggaaccaaagccagagcccaagcccga 70
>gb|CA025184.1|CA025184 HZ51H04r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ51H04
5-PRIME, mRNA sequence
Length = 633
Score = 61.9 bits (31), Expect = 6e-008
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 823 gaacctaagccagagccaaagcctgagccgaaaccgaaaccagatccaaagccagagcc 881
||||| ||||||||||| ||||| ||||||| |||||||| || ||||||||||||||
Sbjct: 310 gaaccaaagccagagcccaagcccgagccgatgccgaaaccggaaccaaagccagagcc 368
Score = 61.9 bits (31), Expect = 6e-008
Identities = 169/215 (78%)
Strand = Plus / Plus
Query: 667 aagccagagcctaagcctgagccgaaaccagaaccaaagccagagccacaaccaaagcct 726
|||||||||||||| || ||||||||| ||||||||||||||||| | || ||||
Sbjct: 280 aagccagagcctaaaccgatgccgaaaccggaaccaaagccagagcccaagcccgagccg 339
Query: 727 gagcctaaaccagaaccaaaaccagagccaaagccagagcctaagcccgaaccaaaacca 786
||| ||||| |||||||| |||||||| ||||| ||||| | ||| |||| |||||
Sbjct: 340 atgccgaaaccggaaccaaagccagagcccaagcccgagccgatgccaaaacccgaacca 399
Query: 787 gagccaaagcctgagcctaaacccgaaccaaggccagaacctaagccagagccaaagcct 846
||||| ||||| |||| | || |||| || ||||| ||||||||||| |||||
Sbjct: 400 aagccagagcctaagcccgagccgatgccaaaacccgaaccaaagccagagcccaagccc 459
Query: 847 gagccgaaaccgaaaccagatccaaagccagagcc 881
||||||| |||||||| || || ||||| |||||
Sbjct: 460 gagccgatgccgaaacccgaaccgaagcctgagcc 494
Score = 61.9 bits (31), Expect = 6e-008
Identities = 75/89 (84%), Gaps = 3/89 (3%)
Strand = Plus / Plus
Query: 508 ccaaaaccagagcctaagccagagcataaacctgagccaa---agccagagcctaaaccc 564
|||||||| || || |||||||||| ||||| ||||||| ||||||||||||||||
Sbjct: 238 ccaaaacctgaaccaaagccagagcccaaacccgagccaatgaagccagagcctaaaccg 297
Query: 565 aaaccgaaaccagagccaaagccagagcc 593
| |||||||| || ||||||||||||||
Sbjct: 298 atgccgaaaccggaaccaaagccagagcc 326
Score = 56.0 bits (28), Expect = 3e-006
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 673 gagcctaagcctgagccgaaaccagaaccaaagccagagccacaaccaaagcctgagcct 732
||||||||||||||||| |||||||| || | |||| | || |||||||||| |||||
Sbjct: 520 gagcctaagcctgagcccaaaccagagccgatgccaaaacccgaaccaaagccagagccc 579
Query: 733 aaaccaga 740
||||||||
Sbjct: 580 aaaccaga 587
Score = 56.0 bits (28), Expect = 3e-006
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 613 aagccagagcctaaacccgaaccgaaaccggagccaaagccagagccc 660
||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 280 aagccagagcctaaaccgatgccgaaaccggaaccaaagccagagccc 327
Score = 54.0 bits (27), Expect = 1e-005
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 910 ccaaaaccagagccaaagccagagcctaagcccga 944
|||||||| || |||||||||||||||||||||||
Sbjct: 385 ccaaaacccgaaccaaagccagagcctaagcccga 419
Score = 54.0 bits (27), Expect = 1e-005
Identities = 66/79 (83%)
Strand = Plus / Plus
Query: 613 aagccagagcctaaacccgaaccgaaaccggagccaaagccagagccccaacctaagcca 672
||||||||||| || || ||||| || |||||||| | |||| ||||| | |||||||||
Sbjct: 85 aagccagagcccaagccggaacccaagccggagccgatgccaaagcccgagcctaagcca 144
Query: 673 gagcctaagcctgagccga 691
|| || ||||| |||||||
Sbjct: 145 gaacccaagcccgagccga 163
Score = 52.0 bits (26), Expect = 5e-005
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 495 gccaaaacctgaaccaaaaccagagcctaagccagagc 532
||||||||| |||||||| |||||||||||||| ||||
Sbjct: 384 gccaaaacccgaaccaaagccagagcctaagcccgagc 421
Score = 50.1 bits (25), Expect = 2e-004
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 691 aaaccagaaccaaagccagagccacaaccaaagcctgagcctaaaccagaaccaaaacca 750
||||| ||||||||||||||||| ||||| |||| ||| ||||| |||||||| |||
Sbjct: 556 aaacccgaaccaaagccagagcccaaaccagagccgatgccaaaacccgaaccaaagcca 615
Query: 751 gagcc 755
|||||
Sbjct: 616 gagcc 620
Score = 50.1 bits (25), Expect = 2e-004
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 448 cccgaacctaagccagagcctaagcccga 476
|||||||| ||||||||||||||||||||
Sbjct: 391 cccgaaccaaagccagagcctaagcccga 419
Score = 48.1 bits (24), Expect = 8e-004
Identities = 54/64 (84%)
Strand = Plus / Plus
Query: 956 agccaaagcctgagcctaaacccgaaccaagaccagaaccagaaccaaagccagagccta 1015
|||| ||||||||||| ||||| || || | ||| |||| ||||||||||||||||| |
Sbjct: 521 agcctaagcctgagcccaaaccagagccgatgccaaaacccgaaccaaagccagagccca 580
Query: 1016 aacc 1019
||||
Sbjct: 581 aacc 584
Score = 48.1 bits (24), Expect = 8e-004
Identities = 56/67 (83%), Gaps = 6/67 (8%)
Strand = Plus / Plus
Query: 884 aaccaaagccagagcctaagccagaacc------aaaaccagagccaaagccagagccta 937
|||||||||||||||||||||| || || |||||| || |||||||||||||| |
Sbjct: 395 aaccaaagccagagcctaagcccgagccgatgccaaaacccgaaccaaagccagagccca 454
Query: 938 agcccga 944
|||||||
Sbjct: 455 agcccga 461
Score = 48.1 bits (24), Expect = 8e-004
Identities = 86/107 (80%), Gaps = 6/107 (5%)
Strand = Plus / Plus
Query: 913 aaaccagagccaaagccagagcctaagcccga------accaaaaccaaagccaaagcct 966
||||| || |||||||||||||| |||||||| |||||||| | ||||||||
Sbjct: 346 aaaccggaaccaaagccagagcccaagcccgagccgatgccaaaacccgaaccaaagcca 405
Query: 967 gagcctaaacccgaaccaagaccagaaccagaaccaaagccagagcc 1013
|||||||| ||||| || | ||| |||| |||||||||||||||||
Sbjct: 406 gagcctaagcccgagccgatgccaaaacccgaaccaaagccagagcc 452
Score = 46.1 bits (23), Expect = 0.003
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 823 gaacctaagccagagccaaagcctgagccgaaaccgaaaccagatccaaagccagagcc 881
||||| ||||||||||| || || ||||||| || ||||| || ||||||||||||||
Sbjct: 562 gaaccaaagccagagcccaaaccagagccgatgccaaaacccgaaccaaagccagagcc 620
Score = 46.1 bits (23), Expect = 0.003
Identities = 55/66 (83%), Gaps = 6/66 (9%)
Strand = Plus / Plus
Query: 1063 gagcctaagcctgatccaaaaccagagccta------aacccgaaccaaaaccagagccc 1116
|||||||||||||| || ||||||||||| | ||||||||||||| |||||||||
Sbjct: 520 gagcctaagcctgagcccaaaccagagccgatgccaaaacccgaaccaaagccagagccc 579
Query: 1117 caacca 1122
|||||
Sbjct: 580 aaacca 585
Score = 46.1 bits (23), Expect = 0.003
Identities = 49/58 (84%), Gaps = 6/58 (10%)
Strand = Plus / Plus
Query: 662 aacctaagccagagcctaagcctgagccg------aaaccagaaccaaagccagagcc 713
|||| ||||||||||||||||| |||||| ||||| |||||||||||||||||
Sbjct: 395 aaccaaagccagagcctaagcccgagccgatgccaaaacccgaaccaaagccagagcc 452
Score = 46.1 bits (23), Expect = 0.003
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 958 ccaaagcctgagcctaaacccgaaccaagaccagaaccagaaccaaagccagagcctaa 1016
|||||||| ||||| || ||||| || | ||| |||| ||||||||||||||||||||
Sbjct: 355 ccaaagccagagcccaagcccgagccgatgccaaaacccgaaccaaagccagagcctaa 413
Score = 46.1 bits (23), Expect = 0.003
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 634 ccgaaaccggagccaaagccagagccc 660
||||||||||| |||||||||||||||
Sbjct: 343 ccgaaaccggaaccaaagccagagccc 369
Score = 46.1 bits (23), Expect = 0.003
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 495 gccaaaacctgaaccaaaaccagagcc 521
|||||||||||||||||| ||||||||
Sbjct: 237 gccaaaacctgaaccaaagccagagcc 263
Score = 44.1 bits (22), Expect = 0.013
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 958 ccaaagcctgagcctaaacccgaaccaagaccagaaccagaaccaaagccagagcctaaa 1017
|||||||| ||||| ||||| || || | ||| |||| ||||||||||||||||| |||
Sbjct: 565 ccaaagccagagcccaaaccagagccgatgccaaaacccgaaccaaagccagagcccaaa 624
Query: 1018 cc 1019
||
Sbjct: 625 cc 626
Score = 44.1 bits (22), Expect = 0.013
Identities = 61/74 (82%)
Strand = Plus / Plus
Query: 559 aaacccaaaccgaaaccagagccaaagccagagccacaaccaaaaccagagcctaagcca 618
|||||| |||| || |||||||| || |||||||| |||||||| || || ||||||
Sbjct: 556 aaacccgaaccaaagccagagcccaaaccagagccgatgccaaaacccgaaccaaagcca 615
Query: 619 gagcctaaacccga 632
||||| ||||||||
Sbjct: 616 gagcccaaacccga 629
Score = 44.1 bits (22), Expect = 0.013
Identities = 79/98 (80%)
Strand = Plus / Plus
Query: 826 cctaagccagagccaaagcctgagccgaaaccgaaaccagatccaaagccagagccacaa 885
|||||||| ||||| || || ||||||| || ||||| || |||||||||||||| ||
Sbjct: 523 cctaagcctgagcccaaaccagagccgatgccaaaacccgaaccaaagccagagcccaaa 582
Query: 886 ccaaagccagagcctaagccagaaccaaaaccagagcc 923
||| |||| ||| || || |||||||| ||||||||
Sbjct: 583 ccagagccgatgccaaaacccgaaccaaagccagagcc 620
Score = 44.1 bits (22), Expect = 0.013
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1052 aaccaaagccagagcctaagcc 1073
||||||||||||||||||||||
Sbjct: 395 aaccaaagccagagcctaagcc 416
Score = 44.1 bits (22), Expect = 0.013
Identities = 64/78 (82%)
Strand = Plus / Plus
Query: 555 gcctaaacccaaaccgaaaccagagccaaagccagagccacaaccaaaaccagagcctaa 614
||||||||| |||||||||| ||||| || || ||||| |||||||| || || ||
Sbjct: 195 gcctaaaccagaaccgaaacctgagcccaaacctgagcccatgccaaaacctgaaccaaa 254
Query: 615 gccagagcctaaacccga 632
||||||||| ||||||||
Sbjct: 255 gccagagcccaaacccga 272
Score = 44.1 bits (22), Expect = 0.013
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 886 ccaaagccagagcctaagccagaacc 911
|||||||| |||||||||||||||||
Sbjct: 124 ccaaagcccgagcctaagccagaacc 149
Score = 42.1 bits (21), Expect = 0.051
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1093 aaacccgaaccaaaaccagagccccaacc 1121
|||||||||||||| ||||||||| ||||
Sbjct: 598 aaacccgaaccaaagccagagcccaaacc 626
Score = 42.1 bits (21), Expect = 0.051
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 448 cccgaacctaagccagagcctaagcccga 476
|||||||| ||||||||||| ||||||||
Sbjct: 433 cccgaaccaaagccagagcccaagcccga 461
Score = 42.1 bits (21), Expect = 0.051
Identities = 54/65 (83%)
Strand = Plus / Plus
Query: 907 gaaccaaaaccagagccaaagccagagcctaagcccgaaccaaaaccaaagccaaagcct 966
|||||||| |||||||| ||||| ||||| | ||| |||| ||||||||||| |||||
Sbjct: 352 gaaccaaagccagagcccaagcccgagccgatgccaaaacccgaaccaaagccagagcct 411
Query: 967 gagcc 971
||||
Sbjct: 412 aagcc 416
Score = 40.1 bits (20), Expect = 0.20
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1093 aaacccgaaccaaaaccagagccc 1116
|||||||||||||| |||||||||
Sbjct: 430 aaacccgaaccaaagccagagccc 453
Score = 40.1 bits (20), Expect = 0.20
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 1148 aaccacagccagaacctaagcccgagcc 1175
||||| ||||||| ||||||||||||||
Sbjct: 395 aaccaaagccagagcctaagcccgagcc 422
Score = 40.1 bits (20), Expect = 0.20
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 596 aaccaaaaccagagcctaagccagagcc 623
||||||| |||||||||||||| |||||
Sbjct: 395 aaccaaagccagagcctaagcccgagcc 422
Score = 40.1 bits (20), Expect = 0.20
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 598 ccaaaaccagagcctaagccagagcctaaacccgaaccga 637
|||||||| || || |||||||||||||| ||||| ||||
Sbjct: 385 ccaaaacccgaaccaaagccagagcctaagcccgagccga 424
Score = 40.1 bits (20), Expect = 0.20
Identities = 47/56 (83%)
Strand = Plus / Plus
Query: 889 aagccagagcctaagccagaaccaaaaccagagccaaagccagagcctaagcccga 944
|||||||||||||| || || ||||| || |||||||||||||| ||||||||
Sbjct: 280 aagccagagcctaaaccgatgccgaaaccggaaccaaagccagagcccaagcccga 335
Score = 40.1 bits (20), Expect = 0.20
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 992 aaccagaaccaaagccagagcctaaacc 1019
|||| ||||||||||||||||| |||||
Sbjct: 242 aacctgaaccaaagccagagcccaaacc 269
Score = 40.1 bits (20), Expect = 0.20
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 910 ccaaaaccagagccaaagccagagcctaagcccgaaccaa 949
|||||||| || |||||||||||||| || ||||| ||||
Sbjct: 238 ccaaaacctgaaccaaagccagagcccaaacccgagccaa 277
Score = 40.1 bits (20), Expect = 0.20
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 742 ccaaaaccagagccaaagccagagcctaagcccgaaccaa 781
|||||||| || |||||||||||||| || ||||| ||||
Sbjct: 238 ccaaaacctgaaccaaagccagagcccaaacccgagccaa 277
Score = 40.1 bits (20), Expect = 0.20
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 621 gcctaaacccgaaccgaaaccggagccaaagccagagccc 660
||||||||| ||||||||||| ||||| || || ||||||
Sbjct: 195 gcctaaaccagaaccgaaacctgagcccaaacctgagccc 234
Score = 40.1 bits (20), Expect = 0.20
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 445 aagcccgaacctaagccagagcctaagcccga 476
|||||||| ||||||||||| || ||||||||
Sbjct: 127 aagcccgagcctaagccagaacccaagcccga 158
>gb|CA031223.1|CA031223 HX09F15r HX Hordeum vulgare subsp. vulgare cDNA clone HX09F15
5-PRIME, mRNA sequence
Length = 622
Score = 61.9 bits (31), Expect = 6e-008
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 823 gaacctaagccagagccaaagcctgagccgaaaccgaaaccagatccaaagccagagcc 881
||||| ||||||||||| ||||| ||||||| |||||||| || ||||||||||||||
Sbjct: 558 gaaccaaagccagagcccaagcccgagccgatgccgaaaccggaaccaaagccagagcc 616
Score = 61.9 bits (31), Expect = 6e-008
Identities = 75/89 (84%), Gaps = 3/89 (3%)
Strand = Plus / Plus
Query: 508 ccaaaaccagagcctaagccagagcataaacctgagccaa---agccagagcctaaaccc 564
|||||||| || || |||||||||| ||||| ||||||| ||||||||||||||||
Sbjct: 486 ccaaaacctgaaccaaagccagagcccaaacccgagccaatgaagccagagcctaaaccg 545
Query: 565 aaaccgaaaccagagccaaagccagagcc 593
| |||||||| || ||||||||||||||
Sbjct: 546 atgccgaaaccggaaccaaagccagagcc 574
Score = 56.0 bits (28), Expect = 3e-006
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 613 aagccagagcctaaacccgaaccgaaaccggagccaaagccagagccc 660
||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 528 aagccagagcctaaaccgatgccgaaaccggaaccaaagccagagccc 575
Score = 54.0 bits (27), Expect = 1e-005
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 667 aagccagagcctaagcctgagccgaaaccagaaccaaagccagagcc 713
|||||||||||||| || ||||||||| |||||||||||||||||
Sbjct: 528 aagccagagcctaaaccgatgccgaaaccggaaccaaagccagagcc 574
Score = 54.0 bits (27), Expect = 1e-005
Identities = 66/79 (83%)
Strand = Plus / Plus
Query: 613 aagccagagcctaaacccgaaccgaaaccggagccaaagccagagccccaacctaagcca 672
||||||||||| || || ||||| || |||||||| | |||| ||||| | |||||||||
Sbjct: 333 aagccagagcccaagccggaacccaagccggagccgatgccaaagcccgagcctaagcca 392
Query: 673 gagcctaagcctgagccga 691
|| || ||||| |||||||
Sbjct: 393 gaacccaagcccgagccga 411
Score = 46.1 bits (23), Expect = 0.003
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 634 ccgaaaccggagccaaagccagagccc 660
||||||||||| |||||||||||||||
Sbjct: 591 ccgaaaccggaaccaaagccagagccc 617
Score = 46.1 bits (23), Expect = 0.003
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 687 gccgaaaccagaaccaaagccagagcc 713
||||||||| |||||||||||||||||
Sbjct: 590 gccgaaaccggaaccaaagccagagcc 616
Score = 46.1 bits (23), Expect = 0.003
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 495 gccaaaacctgaaccaaaaccagagcc 521
|||||||||||||||||| ||||||||
Sbjct: 485 gccaaaacctgaaccaaagccagagcc 511
Score = 44.1 bits (22), Expect = 0.013
Identities = 64/78 (82%)
Strand = Plus / Plus
Query: 555 gcctaaacccaaaccgaaaccagagccaaagccagagccacaaccaaaaccagagcctaa 614
||||||||| |||||||||| ||||| || || ||||| |||||||| || || ||
Sbjct: 443 gcctaaaccagaaccgaaacctgagcccaaacctgagcccatgccaaaacctgaaccaaa 502
Query: 615 gccagagcctaaacccga 632
||||||||| ||||||||
Sbjct: 503 gccagagcccaaacccga 520
Score = 44.1 bits (22), Expect = 0.013
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 886 ccaaagccagagcctaagccagaacc 911
|||||||| |||||||||||||||||
Sbjct: 372 ccaaagcccgagcctaagccagaacc 397
Score = 40.1 bits (20), Expect = 0.20
Identities = 47/56 (83%)
Strand = Plus / Plus
Query: 889 aagccagagcctaagccagaaccaaaaccagagccaaagccagagcctaagcccga 944
|||||||||||||| || || ||||| || |||||||||||||| ||||||||
Sbjct: 528 aagccagagcctaaaccgatgccgaaaccggaaccaaagccagagcccaagcccga 583
Score = 40.1 bits (20), Expect = 0.20
Identities = 47/56 (83%)
Strand = Plus / Plus
Query: 721 aagcctgagcctaaaccagaaccaaaaccagagccaaagccagagcctaagcccga 776
||||| ||||||||||| || ||||| || |||||||||||||| ||||||||
Sbjct: 528 aagccagagcctaaaccgatgccgaaaccggaaccaaagccagagcccaagcccga 583
Score = 40.1 bits (20), Expect = 0.20
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 992 aaccagaaccaaagccagagcctaaacc 1019
|||| ||||||||||||||||| |||||
Sbjct: 490 aacctgaaccaaagccagagcccaaacc 517
Score = 40.1 bits (20), Expect = 0.20
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 910 ccaaaaccagagccaaagccagagcctaagcccgaaccaa 949
|||||||| || |||||||||||||| || ||||| ||||
Sbjct: 486 ccaaaacctgaaccaaagccagagcccaaacccgagccaa 525
Score = 40.1 bits (20), Expect = 0.20
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 742 ccaaaaccagagccaaagccagagcctaagcccgaaccaa 781
|||||||| || |||||||||||||| || ||||| ||||
Sbjct: 486 ccaaaacctgaaccaaagccagagcccaaacccgagccaa 525
Score = 40.1 bits (20), Expect = 0.20
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 621 gcctaaacccgaaccgaaaccggagccaaagccagagccc 660
||||||||| ||||||||||| ||||| || || ||||||
Sbjct: 443 gcctaaaccagaaccgaaacctgagcccaaacctgagccc 482
Score = 40.1 bits (20), Expect = 0.20
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 445 aagcccgaacctaagccagagcctaagcccga 476
|||||||| ||||||||||| || ||||||||
Sbjct: 375 aagcccgagcctaagccagaacccaagcccga 406
>gb|AV925308.1|AV925308 AV925308 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd22k02 5', mRNA sequence
Length = 661
Score = 60.0 bits (30), Expect = 2e-007
Identities = 83/101 (82%)
Strand = Plus / Plus
Query: 667 aagccagagcctaagcctgagccgaaaccagaaccaaagccagagccacaaccaaagcct 726
|||||||||||||| || ||||||||| ||||||||||||||||| | || ||||
Sbjct: 540 aagccagagcctaaaccgatgccgaaaccggaaccaaagccagagcccaagcccgagccg 599
Query: 727 gagcctaaaccagaaccaaaaccagagccaaagccagagcc 767
||| ||||| |||||||| |||||||| ||||| |||||
Sbjct: 600 atgccaaaaccngaaccaaagccagagcccaagcccgagcc 640
Score = 56.0 bits (28), Expect = 3e-006
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 823 gaacctaagccagagccaaagcctgagccgaaaccgaaaccagatccaaagccagagcc 881
||||| ||||||||||| ||||| ||||||| || ||||| || ||||||||||||||
Sbjct: 570 gaaccaaagccagagcccaagcccgagccgatgccaaaaccngaaccaaagccagagcc 628
Score = 56.0 bits (28), Expect = 3e-006
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 613 aagccagagcctaaacccgaaccgaaaccggagccaaagccagagccc 660
||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 540 aagccagagcctaaaccgatgccgaaaccggaaccaaagccagagccc 587
Score = 54.0 bits (27), Expect = 1e-005
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 547 aagccagagcctaaacccaaaccgaaaccagagccaaagccagagcc 593
||||||||||||||||| | |||||||| || ||||||||||||||
Sbjct: 540 aagccagagcctaaaccgatgccgaaaccggaaccaaagccagagcc 586
Score = 54.0 bits (27), Expect = 1e-005
Identities = 69/83 (83%)
Strand = Plus / Plus
Query: 555 gcctaaacccaaaccgaaaccagagccaaagccagagccacaaccaaaaccagagcctaa 614
||||||||| |||||||||| ||||| || || ||||| |||||||| || || ||
Sbjct: 455 gcctaaaccagaaccgaaaccggagcccaaacctgagcccatgccaaaacctgaaccaaa 514
Query: 615 gccagagcctaaacccgaaccga 637
||||||||| |||||||||||||
Sbjct: 515 gccagagcccaaacccgaaccga 537
Score = 54.0 bits (27), Expect = 1e-005
Identities = 163/209 (77%), Gaps = 12/209 (5%)
Strand = Plus / Plus
Query: 613 aagccagagcctaaacccgaaccgaaaccggagccaaagccagagccccaacctaagcca 672
||||||||||| || || ||||| || |||||||| | |||| |||| | |||||||||
Sbjct: 333 aagccagagcccaagccggaacccaagccggagccgatgccaaagccagagcctaagcca 392
Query: 673 gagcctaagcctgagccg------aaaccagaaccaaagccagagccacaaccaaagcct 726
|| || ||||| |||||| ||||||||||| || || ||||| |||| |||||
Sbjct: 393 gaacccaagcccgagccgatgcctaaaccagaaccgaaacctgagcccaaacctgagcct 452
Query: 727 gagcctaaaccagaaccaaaaccagagccaaagccagagcctaagcccgaaccaaaacca 786
||||||||||||||| ||||| ||||| || || ||||| | | ||||||||
Sbjct: 453 atgcctaaaccagaaccgaaaccggagcccaaacctgagcccatg------ccaaaacct 506
Query: 787 gagccaaagcctgagcctaaacccgaacc 815
|| |||||||| ||||| |||||||||||
Sbjct: 507 gaaccaaagccagagcccaaacccgaacc 535
Score = 52.0 bits (26), Expect = 5e-005
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 886 ccaaagccagagcctaagccagaacc 911
||||||||||||||||||||||||||
Sbjct: 372 ccaaagccagagcctaagccagaacc 397
Score = 50.1 bits (25), Expect = 2e-004
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 535 aaacctgagccaaagccagagcctaaacccaaaccga 571
|||||||| |||||||||||||| |||||| ||||||
Sbjct: 501 aaacctgaaccaaagccagagcccaaacccgaaccga 537
Score = 48.1 bits (24), Expect = 8e-004
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 910 ccaaaaccagagccaaagccagagcctaagcccga 944
|||||||| || |||||||||||||| ||||||||
Sbjct: 603 ccaaaaccngaaccaaagccagagcccaagcccga 637
Score = 48.1 bits (24), Expect = 8e-004
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 742 ccaaaaccagagccaaagccagagcctaagcccga 776
|||||||| || |||||||||||||| ||||||||
Sbjct: 603 ccaaaaccngaaccaaagccagagcccaagcccga 637
Score = 48.1 bits (24), Expect = 8e-004
Identities = 120/152 (78%)
Strand = Plus / Plus
Query: 814 ccaaggccagaacctaagccagagccaaagcctgagccgaaaccgaaaccagatccaaag 873
|||| |||||| ||||||||||| || ||||| ||||||| || |||||||| || ||
Sbjct: 372 ccaaagccagagcctaagccagaacccaagcccgagccgatgcctaaaccagaaccgaaa 431
Query: 874 ccagagccacaaccaaagccagagcctaagccagaaccaaaaccagagccaaagccagag 933
|| ||||| |||| |||| |||||| |||||||| ||||| ||||| || || |||
Sbjct: 432 cctgagcccaaacctgagcctatgcctaaaccagaaccgaaaccggagcccaaacctgag 491
Query: 934 cctaagcccgaaccaaaaccaaagccaaagcc 965
|| | ||| |||| ||||||||||| ||||
Sbjct: 492 cccatgccaaaacctgaaccaaagccagagcc 523
Score = 46.1 bits (23), Expect = 0.003
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 495 gccaaaacctgaaccaaaaccagagcc 521
|||||||||||||||||| ||||||||
Sbjct: 497 gccaaaacctgaaccaaagccagagcc 523
Score = 46.1 bits (23), Expect = 0.003
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 921 gccaaagccagagcctaagcccgaacc 947
||||||||||||||||||||| |||||
Sbjct: 371 gccaaagccagagcctaagccagaacc 397
Score = 44.1 bits (22), Expect = 0.013
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 992 aaccagaaccaaagccagagcctaaacctgaacc 1025
|||| ||||||||||||||||| ||||| |||||
Sbjct: 502 aacctgaaccaaagccagagcccaaacccgaacc 535
Score = 44.1 bits (22), Expect = 0.013
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 910 ccaaaaccagagccaaagccagagcctaagcccgaacc 947
|||||||| || |||||||||||||| || ||||||||
Sbjct: 498 ccaaaacctgaaccaaagccagagcccaaacccgaacc 535
Score = 42.1 bits (21), Expect = 0.051
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 823 gaacctaagccagagccaaagcctgagccgaaaccgaaacc 863
||||| ||||||||||| ||||| ||||||| ||||||||
Sbjct: 612 gaaccaaagccagagcccaagcccgagccgatgccgaaacc 652
Score = 42.1 bits (21), Expect = 0.051
Identities = 47/56 (83%)
Strand = Plus / Plus
Query: 958 ccaaagcctgagcctaaacccgaaccaagaccagaaccagaaccaaagccagagcc 1013
|||||||| ||||| || ||||| || | ||| |||| |||||||||||||||||
Sbjct: 573 ccaaagccagagcccaagcccgagccgatgccaaaaccngaaccaaagccagagcc 628
Score = 40.1 bits (20), Expect = 0.20
Identities = 49/59 (83%)
Strand = Plus / Plus
Query: 907 gaaccaaaaccagagccaaagccagagcctaagcccgaaccaaaaccaaagccaaagcc 965
|||||||| |||||||| ||||| ||||| | ||| |||| ||||||||||| ||||
Sbjct: 570 gaaccaaagccagagcccaagcccgagccgatgccaaaaccngaaccaaagccagagcc 628
Score = 40.1 bits (20), Expect = 0.20
Identities = 47/56 (83%)
Strand = Plus / Plus
Query: 889 aagccagagcctaagccagaaccaaaaccagagccaaagccagagcctaagcccga 944
|||||||||||||| || || ||||| || |||||||||||||| ||||||||
Sbjct: 540 aagccagagcctaaaccgatgccgaaaccggaaccaaagccagagcccaagcccga 595
Score = 40.1 bits (20), Expect = 0.20
Identities = 47/56 (83%)
Strand = Plus / Plus
Query: 721 aagcctgagcctaaaccagaaccaaaaccagagccaaagccagagcctaagcccga 776
||||| ||||||||||| || ||||| || |||||||||||||| ||||||||
Sbjct: 540 aagccagagcctaaaccgatgccgaaaccggaaccaaagccagagcccaagcccga 595
Score = 40.1 bits (20), Expect = 0.20
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 1072 cctgatccaaaaccagagcctaaacccgaacc 1103
||||| ||||| |||||||| |||||||||||
Sbjct: 504 cctgaaccaaagccagagcccaaacccgaacc 535
Score = 40.1 bits (20), Expect = 0.20
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 598 ccaaaaccagagcctaagccagagcctaaacccgaaccga 637
||||| ||||||||||||||||| || || ||||| ||||
Sbjct: 372 ccaaagccagagcctaagccagaacccaagcccgagccga 411
Score = 40.1 bits (20), Expect = 0.20
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1054 ccaaagccagagcctaagcc 1073
||||||||||||||||||||
Sbjct: 372 ccaaagccagagcctaagcc 391
>gb|BI957173.1|BI957173 HVSMEn0007P02f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0007P02f, mRNA sequence
Length = 874
Score = 58.0 bits (29), Expect = 9e-007
Identities = 83/101 (82%)
Strand = Plus / Plus
Query: 667 aagccagagcctaagcctgagccgaaaccagaaccaaagccagagccacaaccaaagcct 726
|||||||||||||| || ||||||||| ||||||||||||||||| | || ||||
Sbjct: 513 aagccagagcctaaaccgatgccgaaaccggaaccaaagccagagcccaagcccgagccg 572
Query: 727 gagcctaaaccagaaccaaaaccagagccaaagccagagcc 767
||| ||||| |||||||| |||||||| ||||| |||||
Sbjct: 573 atgccaaaacccgaaccaaagccagagcccaagcccgagcc 613
Score = 56.0 bits (28), Expect = 3e-006
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 613 aagccagagcctaaacccgaaccgaaaccggagccaaagccagagccc 660
||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 513 aagccagagcctaaaccgatgccgaaaccggaaccaaagccagagccc 560
Score = 54.0 bits (27), Expect = 1e-005
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 823 gaacctaagccagagccaaagcctgagccgaaaccgaaaccagatccaaagccagagcc 881
||||| ||||||||||| ||||| ||||||| || ||||| || ||||||||||||||
Sbjct: 543 gaaccaaagccagagcccaagcccgagccgatgccaaaacccgaaccaaagccagagcc 601
Score = 54.0 bits (27), Expect = 1e-005
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 547 aagccagagcctaaacccaaaccgaaaccagagccaaagccagagcc 593
||||||||||||||||| | |||||||| || ||||||||||||||
Sbjct: 513 aagccagagcctaaaccgatgccgaaaccggaaccaaagccagagcc 559
Score = 46.1 bits (23), Expect = 0.003
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 823 gaacctaagccagagccaaagcctgagccgaaaccgaaaccagatccaaagccagagcc 881
||||| ||||||||||| ||||| ||||||| |||||||| || || ||||| |||||
Sbjct: 585 gaaccaaagccagagcccaagcccgagccgatgccgaaacccgaaccgaagcctgagcc 643
Score = 46.1 bits (23), Expect = 0.003
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 910 ccaaaaccagagccaaagccagagcctaagcccga 944
|||||||| || |||||||||||||| ||||||||
Sbjct: 576 ccaaaacccgaaccaaagccagagcccaagcccga 610
Score = 46.1 bits (23), Expect = 0.003
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 742 ccaaaaccagagccaaagccagagcctaagcccga 776
|||||||| || |||||||||||||| ||||||||
Sbjct: 576 ccaaaacccgaaccaaagccagagcccaagcccga 610
Score = 42.1 bits (21), Expect = 0.051
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 448 cccgaacctaagccagagcctaagcccga 476
|||||||| ||||||||||| ||||||||
Sbjct: 582 cccgaaccaaagccagagcccaagcccga 610
Score = 42.1 bits (21), Expect = 0.051
Identities = 54/65 (83%)
Strand = Plus / Plus
Query: 691 aaaccagaaccaaagccagagccacaaccaaagcctgagcctaaaccagaaccaaaacca 750
||||||||||| || || ||||| |||| ||||| ||||||||||||||| |||||
Sbjct: 402 aaaccagaaccgaaacctgagcccaaacctgagcctatgcctaaaccagaaccgaaacct 461
Query: 751 gagcc 755
|||||
Sbjct: 462 gagcc 466
Score = 42.1 bits (21), Expect = 0.051
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 729 gcctaaaccagaaccaaaaccagagccaaagccagagccta 769
||||||||||||||| ||||| ||||| || || |||||||
Sbjct: 398 gcctaaaccagaaccgaaacctgagcccaaacctgagccta 438
Score = 40.1 bits (20), Expect = 0.20
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 772 cccgaaccaaaaccagagccaaagcctgagcc 803
||||||||||| |||||||| ||||| |||||
Sbjct: 582 cccgaaccaaagccagagcccaagcccgagcc 613
Score = 40.1 bits (20), Expect = 0.20
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1093 aaacccgaaccaaaaccagagccc 1116
|||||||||||||| |||||||||
Sbjct: 579 aaacccgaaccaaagccagagccc 602
Score = 40.1 bits (20), Expect = 0.20
Identities = 47/56 (83%)
Strand = Plus / Plus
Query: 958 ccaaagcctgagcctaaacccgaaccaagaccagaaccagaaccaaagccagagcc 1013
|||||||| ||||| || ||||| || | ||| |||| |||||||||||||||||
Sbjct: 546 ccaaagccagagcccaagcccgagccgatgccaaaacccgaaccaaagccagagcc 601
Score = 40.1 bits (20), Expect = 0.20
Identities = 47/56 (83%)
Strand = Plus / Plus
Query: 889 aagccagagcctaagccagaaccaaaaccagagccaaagccagagcctaagcccga 944
|||||||||||||| || || ||||| || |||||||||||||| ||||||||
Sbjct: 513 aagccagagcctaaaccgatgccgaaaccggaaccaaagccagagcccaagcccga 568
Score = 40.1 bits (20), Expect = 0.20
Identities = 47/56 (83%)
Strand = Plus / Plus
Query: 721 aagcctgagcctaaaccagaaccaaaaccagagccaaagccagagcctaagcccga 776
||||| ||||||||||| || ||||| || |||||||||||||| ||||||||
Sbjct: 513 aagccagagcctaaaccgatgccgaaaccggaaccaaagccagagcccaagcccga 568
>gb|BF064955.2|BF064955 HV_CEb0022B23f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0022B23f, mRNA sequence
Length = 829
Score = 58.0 bits (29), Expect = 9e-007
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 613 aagccagagcctaaacccgaaccgaaaccggagccaaagccagagccccaacc 665
||||||||||||||||| ||||||||||| ||||||||||| ||||||||
Sbjct: 271 aagccagagcctaaaccgatgccgaaaccggaaccaaagccagaaccccaacc 323
Score = 50.1 bits (25), Expect = 2e-004
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 667 aagccagagcctaagcctgagccgaaaccagaaccaaagccagagccacaacc 719
|||||||||||||| || ||||||||| |||||||||||||| || |||||
Sbjct: 271 aagccagagcctaaaccgatgccgaaaccggaaccaaagccagaaccccaacc 323
Score = 50.1 bits (25), Expect = 2e-004
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 547 aagccagagcctaaacccaaaccgaaaccagagccaaagccagagccacaacc 599
||||||||||||||||| | |||||||| || ||||||||||| || |||||
Sbjct: 271 aagccagagcctaaaccgatgccgaaaccggaaccaaagccagaaccccaacc 323
Score = 44.1 bits (22), Expect = 0.013
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 886 ccaaagccagagcctaagccagaacc 911
||||||||||||||||| ||||||||
Sbjct: 103 ccaaagccagagcctaatccagaacc 128
Score = 42.1 bits (21), Expect = 0.051
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 729 gcctaaaccagaaccaaaacc 749
|||||||||||||||||||||
Sbjct: 186 gcctaaaccagaaccaaaacc 206
Score = 40.1 bits (20), Expect = 0.20
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 495 gccaaaacctgaaccaaaaccaga 518
|||||||||||||||||| |||||
Sbjct: 228 gccaaaacctgaaccaaagccaga 251
>gb|BF627515.3|BF627515 HVSMEb0005B01f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0005B01f, mRNA sequence
Length = 773
Score = 58.0 bits (29), Expect = 9e-007
Identities = 83/101 (82%)
Strand = Plus / Plus
Query: 667 aagccagagcctaagcctgagccgaaaccagaaccaaagccagagccacaaccaaagcct 726
|||||||||||||| || ||||||||| ||||||||||||||||| | || ||||
Sbjct: 180 aagccagagcctaaaccgatgccgaaaccggaaccaaagccagagcccaagcccgagccg 239
Query: 727 gagcctaaaccagaaccaaaaccagagccaaagccagagcc 767
||| ||||| |||||||| |||||||| ||||| |||||
Sbjct: 240 atgccaaaacccgaaccaaagccagagcccaagcccgagcc 280
Score = 56.0 bits (28), Expect = 3e-006
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 613 aagccagagcctaaacccgaaccgaaaccggagccaaagccagagccc 660
||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 180 aagccagagcctaaaccgatgccgaaaccggaaccaaagccagagccc 227
Score = 54.0 bits (27), Expect = 1e-005
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 823 gaacctaagccagagccaaagcctgagccgaaaccgaaaccagatccaaagccagagcc 881
||||| ||||||||||| ||||| ||||||| || ||||| || ||||||||||||||
Sbjct: 210 gaaccaaagccagagcccaagcccgagccgatgccaaaacccgaaccaaagccagagcc 268
Score = 54.0 bits (27), Expect = 1e-005
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 547 aagccagagcctaaacccaaaccgaaaccagagccaaagccagagcc 593
||||||||||||||||| | |||||||| || ||||||||||||||
Sbjct: 180 aagccagagcctaaaccgatgccgaaaccggaaccaaagccagagcc 226
Score = 46.1 bits (23), Expect = 0.003
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 823 gaacctaagccagagccaaagcctgagccgaaaccgaaaccagatccaaagccagagcc 881
||||| ||||||||||| ||||| ||||||| |||||||| || || ||||| |||||
Sbjct: 252 gaaccaaagccagagcccaagcccgagccgatgccgaaacccgaaccgaagcctgagcc 310
Score = 46.1 bits (23), Expect = 0.003
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 910 ccaaaaccagagccaaagccagagcctaagcccga 944
|||||||| || |||||||||||||| ||||||||
Sbjct: 243 ccaaaacccgaaccaaagccagagcccaagcccga 277
Score = 46.1 bits (23), Expect = 0.003
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 742 ccaaaaccagagccaaagccagagcctaagcccga 776
|||||||| || |||||||||||||| ||||||||
Sbjct: 243 ccaaaacccgaaccaaagccagagcccaagcccga 277
Score = 42.1 bits (21), Expect = 0.051
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 448 cccgaacctaagccagagcctaagcccga 476
|||||||| ||||||||||| ||||||||
Sbjct: 249 cccgaaccaaagccagagcccaagcccga 277
Score = 42.1 bits (21), Expect = 0.051
Identities = 54/65 (83%)
Strand = Plus / Plus
Query: 691 aaaccagaaccaaagccagagccacaaccaaagcctgagcctaaaccagaaccaaaacca 750
||||||||||| || || ||||| |||| ||||| ||||||||||||||| |||||
Sbjct: 69 aaaccagaaccgaaacctgagcccaaacctgagcctatgcctaaaccagaaccgaaacct 128
Query: 751 gagcc 755
|||||
Sbjct: 129 gagcc 133
Score = 42.1 bits (21), Expect = 0.051
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 729 gcctaaaccagaaccaaaaccagagccaaagccagagccta 769
||||||||||||||| ||||| ||||| || || |||||||
Sbjct: 65 gcctaaaccagaaccgaaacctgagcccaaacctgagccta 105
Score = 40.1 bits (20), Expect = 0.20
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 772 cccgaaccaaaaccagagccaaagcctgagcc 803
||||||||||| |||||||| ||||| |||||
Sbjct: 249 cccgaaccaaagccagagcccaagcccgagcc 280
Score = 40.1 bits (20), Expect = 0.20
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1093 aaacccgaaccaaaaccagagccc 1116
|||||||||||||| |||||||||
Sbjct: 246 aaacccgaaccaaagccagagccc 269
Score = 40.1 bits (20), Expect = 0.20
Identities = 47/56 (83%)
Strand = Plus / Plus
Query: 958 ccaaagcctgagcctaaacccgaaccaagaccagaaccagaaccaaagccagagcc 1013
|||||||| ||||| || ||||| || | ||| |||| |||||||||||||||||
Sbjct: 213 ccaaagccagagcccaagcccgagccgatgccaaaacccgaaccaaagccagagcc 268
Score = 40.1 bits (20), Expect = 0.20
Identities = 47/56 (83%)
Strand = Plus / Plus
Query: 889 aagccagagcctaagccagaaccaaaaccagagccaaagccagagcctaagcccga 944
|||||||||||||| || || ||||| || |||||||||||||| ||||||||
Sbjct: 180 aagccagagcctaaaccgatgccgaaaccggaaccaaagccagagcccaagcccga 235
Score = 40.1 bits (20), Expect = 0.20
Identities = 47/56 (83%)
Strand = Plus / Plus
Query: 721 aagcctgagcctaaaccagaaccaaaaccagagccaaagccagagcctaagcccga 776
||||| ||||||||||| || ||||| || |||||||||||||| ||||||||
Sbjct: 180 aagccagagcctaaaccgatgccgaaaccggaaccaaagccagagcccaagcccga 235
>gb|AV914673.1|AV914673 AV914673 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags7i05 5', mRNA sequence
Length = 774
Score = 58.0 bits (29), Expect = 9e-007
Identities = 83/101 (82%)
Strand = Plus / Plus
Query: 667 aagccagagcctaagcctgagccgaaaccagaaccaaagccagagccacaaccaaagcct 726
|||||||||||||| || ||||||||| ||||||||||||||||| | || ||||
Sbjct: 242 aagccagagcctaaaccgatgccgaaaccggaaccaaagccagagcccaagcccgagccg 301
Query: 727 gagcctaaaccagaaccaaaaccagagccaaagccagagcc 767
||| ||||| |||||||| |||||||| ||||| |||||
Sbjct: 302 atgccaaaacccgaaccaaagccagagcccaagcccgagcc 342
Score = 56.0 bits (28), Expect = 3e-006
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 613 aagccagagcctaaacccgaaccgaaaccggagccaaagccagagccc 660
||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 242 aagccagagcctaaaccgatgccgaaaccggaaccaaagccagagccc 289
Score = 54.0 bits (27), Expect = 1e-005
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 823 gaacctaagccagagccaaagcctgagccgaaaccgaaaccagatccaaagccagagcc 881
||||| ||||||||||| ||||| ||||||| || ||||| || ||||||||||||||
Sbjct: 272 gaaccaaagccagagcccaagcccgagccgatgccaaaacccgaaccaaagccagagcc 330
Score = 54.0 bits (27), Expect = 1e-005
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 547 aagccagagcctaaacccaaaccgaaaccagagccaaagccagagcc 593
||||||||||||||||| | |||||||| || ||||||||||||||
Sbjct: 242 aagccagagcctaaaccgatgccgaaaccggaaccaaagccagagcc 288
Score = 54.0 bits (27), Expect = 1e-005
Identities = 69/83 (83%)
Strand = Plus / Plus
Query: 555 gcctaaacccaaaccgaaaccagagccaaagccagagccacaaccaaaaccagagcctaa 614
||||||||| |||||||||| ||||| || || ||||| |||||||| || || ||
Sbjct: 157 gcctaaaccagaaccgaaaccggagcccaaacctgagcccatgccaaaacctgaaccaaa 216
Query: 615 gccagagcctaaacccgaaccga 637
||||||||| |||||||||||||
Sbjct: 217 gccagagcccaaacccgaaccga 239
Score = 54.0 bits (27), Expect = 1e-005
Identities = 163/209 (77%), Gaps = 12/209 (5%)
Strand = Plus / Plus
Query: 613 aagccagagcctaaacccgaaccgaaaccggagccaaagccagagccccaacctaagcca 672
||||||||||| || || ||||| || |||||||| | |||| |||| | |||||||||
Sbjct: 35 aagccagagcccaagccggaacccaagccggagccgatgccaaagccagagcctaagcca 94
Query: 673 gagcctaagcctgagccg------aaaccagaaccaaagccagagccacaaccaaagcct 726
|| || ||||| |||||| ||||||||||| || || ||||| |||| |||||
Sbjct: 95 gaacccaagcccgagccgatgcctaaaccagaaccgaaacctgagcccaaacctgagcct 154
Query: 727 gagcctaaaccagaaccaaaaccagagccaaagccagagcctaagcccgaaccaaaacca 786
||||||||||||||| ||||| ||||| || || ||||| | | ||||||||
Sbjct: 155 atgcctaaaccagaaccgaaaccggagcccaaacctgagcccatg------ccaaaacct 208
Query: 787 gagccaaagcctgagcctaaacccgaacc 815
|| |||||||| ||||| |||||||||||
Sbjct: 209 gaaccaaagccagagcccaaacccgaacc 237
Score = 52.0 bits (26), Expect = 5e-005
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 946 ccaaaaccaaagccaaagcctgagcctaaacccgaaccaagaccagaaccagaaccaaag 1005
|||||||| |||| ||||||||||| ||||| || || | ||| |||| |||||||||
Sbjct: 431 ccaaaacctgagcctaagcctgagcccaaaccagagccgatgccaaaacccgaaccaaag 490
Query: 1006 ccagagcctaaacc 1019
|||||||| |||||
Sbjct: 491 ccagagcccaaacc 504
Score = 52.0 bits (26), Expect = 5e-005
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 886 ccaaagccagagcctaagccagaacc 911
||||||||||||||||||||||||||
Sbjct: 74 ccaaagccagagcctaagccagaacc 99
Score = 50.1 bits (25), Expect = 2e-004
Identities = 73/89 (82%)
Strand = Plus / Plus
Query: 793 aagcctgagcctaaacccgaaccaaggccagaacctaagccagagccaaagcctgagccg 852
||||||||||||||||| |||| || ||||| ||||||||||| ||||| ||||||
Sbjct: 515 aagcctgagcctaaaccgatgccaaaacccgaaccgaagccagagcccaagcccgagccg 574
Query: 853 aaaccgaaaccagatccaaagccagagcc 881
| || ||||| || || |||||||||||
Sbjct: 575 atgccaaaacctgaacccaagccagagcc 603
Score = 50.1 bits (25), Expect = 2e-004
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 673 gagcctaagcctgagccgaaaccagaaccaaagccagagccacaaccaaagcctgagcct 732
||||||||||||||||| |||||||| || | |||| | || |||||||||| |||||
Sbjct: 440 gagcctaagcctgagcccaaaccagagccgatgccaaaacccgaaccaaagccagagccc 499
Query: 733 aaacc 737
|||||
Sbjct: 500 aaacc 504
Score = 50.1 bits (25), Expect = 2e-004
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 535 aaacctgagccaaagccagagcctaaacccaaaccga 571
|||||||| |||||||||||||| |||||| ||||||
Sbjct: 203 aaacctgaaccaaagccagagcccaaacccgaaccga 239
Score = 48.1 bits (24), Expect = 8e-004
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 721 aagcctgagcctaaaccagaaccaaaaccagagccaaagccagagcctaagcccga 776
||||||||||||||||| |||||||| || || ||||||||||| ||||||||
Sbjct: 515 aagcctgagcctaaaccgatgccaaaacccgaaccgaagccagagcccaagcccga 570
Score = 48.1 bits (24), Expect = 8e-004
Identities = 120/152 (78%)
Strand = Plus / Plus
Query: 814 ccaaggccagaacctaagccagagccaaagcctgagccgaaaccgaaaccagatccaaag 873
|||| |||||| ||||||||||| || ||||| ||||||| || |||||||| || ||
Sbjct: 74 ccaaagccagagcctaagccagaacccaagcccgagccgatgcctaaaccagaaccgaaa 133
Query: 874 ccagagccacaaccaaagccagagcctaagccagaaccaaaaccagagccaaagccagag 933
|| ||||| |||| |||| |||||| |||||||| ||||| ||||| || || |||
Sbjct: 134 cctgagcccaaacctgagcctatgcctaaaccagaaccgaaaccggagcccaaacctgag 193
Query: 934 cctaagcccgaaccaaaaccaaagccaaagcc 965
|| | ||| |||| ||||||||||| ||||
Sbjct: 194 cccatgccaaaacctgaaccaaagccagagcc 225
Score = 46.1 bits (23), Expect = 0.003
Identities = 61/74 (82%), Gaps = 6/74 (8%)
Strand = Plus / Plus
Query: 1054 ccaaagccagagcctaagcctgatccaaaaccaga------gcctaaacccgaaccaaaa 1107
||||| || |||||||||||||| || |||||||| ||| ||||||||||||||
Sbjct: 431 ccaaaacctgagcctaagcctgagcccaaaccagagccgatgccaaaacccgaaccaaag 490
Query: 1108 ccagagccccaacc 1121
||||||||| ||||
Sbjct: 491 ccagagcccaaacc 504
Score = 46.1 bits (23), Expect = 0.003
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 823 gaacctaagccagagccaaagcctgagccgaaaccgaaaccagatccaaagccagagcc 881
||||| ||||||||||| ||||| ||||||| |||||||| || || ||||| |||||
Sbjct: 314 gaaccaaagccagagcccaagcccgagccgatgccgaaacccgaaccgaagcctgagcc 372
Score = 46.1 bits (23), Expect = 0.003
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 910 ccaaaaccagagccaaagccagagcctaagcccga 944
|||||||| || |||||||||||||| ||||||||
Sbjct: 305 ccaaaacccgaaccaaagccagagcccaagcccga 339
Score = 46.1 bits (23), Expect = 0.003
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 742 ccaaaaccagagccaaagccagagcctaagcccga 776
|||||||| || |||||||||||||| ||||||||
Sbjct: 305 ccaaaacccgaaccaaagccagagcccaagcccga 339
Score = 46.1 bits (23), Expect = 0.003
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 495 gccaaaacctgaaccaaaaccagagcc 521
|||||||||||||||||| ||||||||
Sbjct: 199 gccaaaacctgaaccaaagccagagcc 225
Score = 46.1 bits (23), Expect = 0.003
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 921 gccaaagccagagcctaagcccgaacc 947
||||||||||||||||||||| |||||
Sbjct: 73 gccaaagccagagcctaagccagaacc 99
Score = 44.1 bits (22), Expect = 0.013
Identities = 61/74 (82%)
Strand = Plus / Plus
Query: 682 cctgagccgaaaccagaaccaaagccagagccacaaccaaagcctgagcctaaaccagaa 741
|||||||| || || ||||| ||||||||||| ||||| ||||||||||| || ||
Sbjct: 395 cctgagcctaagcctgaacccaagccagagccgatgccaaaacctgagcctaagcctgag 454
Query: 742 ccaaaaccagagcc 755
|| |||||||||||
Sbjct: 455 cccaaaccagagcc 468
Score = 44.1 bits (22), Expect = 0.013
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 992 aaccagaaccaaagccagagcctaaacctgaacc 1025
|||| ||||||||||||||||| ||||| |||||
Sbjct: 204 aacctgaaccaaagccagagcccaaacccgaacc 237
Score = 44.1 bits (22), Expect = 0.013
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 910 ccaaaaccagagccaaagccagagcctaagcccgaacc 947
|||||||| || |||||||||||||| || ||||||||
Sbjct: 200 ccaaaacctgaaccaaagccagagcccaaacccgaacc 237
Score = 42.1 bits (21), Expect = 0.051
Identities = 67/83 (80%)
Strand = Plus / Plus
Query: 823 gaacctaagccagagccaaagcctgagccgaaaccgaaaccagatccaaagccagagcca 882
||||| ||||||||||| || || ||||||| || ||||| || || |||||||||||
Sbjct: 617 gaaccgaagccagagcccaaacccgagccgatgccaaaacctgaacccaagccagagccg 676
Query: 883 caaccaaagccagagcctaagcc 905
|||||| | |||||||||||
Sbjct: 677 atgccaaagncngagcctaagcc 699
Score = 42.1 bits (21), Expect = 0.051
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 448 cccgaacctaagccagagcctaagcccga 476
|||||||| ||||||||||| ||||||||
Sbjct: 542 cccgaaccgaagccagagcccaagcccga 570
Score = 42.1 bits (21), Expect = 0.051
Identities = 54/65 (83%)
Strand = Plus / Plus
Query: 559 aaacccaaaccgaaaccagagccaaagccagagccacaaccaaaaccagagcctaagcca 618
|||||| ||||||| |||||||| ||||| ||||| |||||||| || || ||||||
Sbjct: 539 aaacccgaaccgaagccagagcccaagcccgagccgatgccaaaacctgaacccaagcca 598
Query: 619 gagcc 623
|||||
Sbjct: 599 gagcc 603
Score = 42.1 bits (21), Expect = 0.051
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 448 cccgaacctaagccagagcctaagcccga 476
|||||||| ||||||||||| ||||||||
Sbjct: 311 cccgaaccaaagccagagcccaagcccga 339
Score = 40.1 bits (20), Expect = 0.20
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 598 ccaaaaccagagcctaagccagagcctaaacccgaaccga 637
|||||||| || || ||||||||||| |||||||| ||||
Sbjct: 608 ccaaaacccgaaccgaagccagagcccaaacccgagccga 647
Score = 40.1 bits (20), Expect = 0.20
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 598 ccaaaaccagagcctaagccagagcctaaacccgaaccga 637
|||||||| || || ||||||||||| |||||||| ||||
Sbjct: 473 ccaaaacccgaaccaaagccagagcccaaacccgagccga 512
Score = 40.1 bits (20), Expect = 0.20
Identities = 47/56 (83%)
Strand = Plus / Plus
Query: 826 cctaagccagagccaaagcctgagccgaaaccgaaaccagatccaaagccagagcc 881
|||||||| ||||| || || ||||||| || ||||| || ||||||||||||||
Sbjct: 443 cctaagcctgagcccaaaccagagccgatgccaaaacccgaaccaaagccagagcc 498
Score = 40.1 bits (20), Expect = 0.20
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 778 ccaaaaccagagccaaagcctgagcctaaacc 809
|||||||| ||||| ||||||||||| |||||
Sbjct: 431 ccaaaacctgagcctaagcctgagcccaaacc 462
Score = 40.1 bits (20), Expect = 0.20
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 598 ccaaaaccagagcctaagccagagcctaaacc 629
|||||||| ||||||||||| ||||| |||||
Sbjct: 431 ccaaaacctgagcctaagcctgagcccaaacc 462
Score = 40.1 bits (20), Expect = 0.20
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 436 cctgaacctaagcccgaacctaagccagagcc 467
||||| |||||||| ||||| |||||||||||
Sbjct: 395 cctgagcctaagcctgaacccaagccagagcc 426
Score = 40.1 bits (20), Expect = 0.20
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 772 cccgaaccaaaaccagagccaaagcctgagcc 803
||||||||||| |||||||| ||||| |||||
Sbjct: 311 cccgaaccaaagccagagcccaagcccgagcc 342
Score = 40.1 bits (20), Expect = 0.20
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1093 aaacccgaaccaaaaccagagccc 1116
|||||||||||||| |||||||||
Sbjct: 308 aaacccgaaccaaagccagagccc 331
Score = 40.1 bits (20), Expect = 0.20
Identities = 47/56 (83%)
Strand = Plus / Plus
Query: 958 ccaaagcctgagcctaaacccgaaccaagaccagaaccagaaccaaagccagagcc 1013
|||||||| ||||| || ||||| || | ||| |||| |||||||||||||||||
Sbjct: 275 ccaaagccagagcccaagcccgagccgatgccaaaacccgaaccaaagccagagcc 330
Score = 40.1 bits (20), Expect = 0.20
Identities = 47/56 (83%)
Strand = Plus / Plus
Query: 889 aagccagagcctaagccagaaccaaaaccagagccaaagccagagcctaagcccga 944
|||||||||||||| || || ||||| || |||||||||||||| ||||||||
Sbjct: 242 aagccagagcctaaaccgatgccgaaaccggaaccaaagccagagcccaagcccga 297
Score = 40.1 bits (20), Expect = 0.20
Identities = 47/56 (83%)
Strand = Plus / Plus
Query: 721 aagcctgagcctaaaccagaaccaaaaccagagccaaagccagagcctaagcccga 776
||||| ||||||||||| || ||||| || |||||||||||||| ||||||||
Sbjct: 242 aagccagagcctaaaccgatgccgaaaccggaaccaaagccagagcccaagcccga 297
Score = 40.1 bits (20), Expect = 0.20
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 1072 cctgatccaaaaccagagcctaaacccgaacc 1103
||||| ||||| |||||||| |||||||||||
Sbjct: 206 cctgaaccaaagccagagcccaaacccgaacc 237
Score = 40.1 bits (20), Expect = 0.20
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 598 ccaaaaccagagcctaagccagagcctaaacccgaaccga 637
||||| ||||||||||||||||| || || ||||| ||||
Sbjct: 74 ccaaagccagagcctaagccagaacccaagcccgagccga 113
Score = 40.1 bits (20), Expect = 0.20
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1054 ccaaagccagagcctaagcc 1073
||||||||||||||||||||
Sbjct: 74 ccaaagccagagcctaagcc 93
>gb|BM817195.1|BM817195 HC03E10_T3.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC03E10_T3.ab1, mRNA sequence
Length = 792
Score = 58.0 bits (29), Expect = 9e-007
Identities = 92/113 (81%)
Strand = Plus / Plus
Query: 793 aagcctgagcctaaacccgaaccaaggccagaacctaagccagagccaaagcctgagccg 852
||||||||||||||||| |||| || ||||| ||||||||||| ||||| ||||||
Sbjct: 152 aagcctgagcctaaaccgatgccaaaacccgaaccgaagccagagcccaagcccgagccg 211
Query: 853 aaaccgaaaccagatccaaagccagagccacaaccaaagccagagcctaagcc 905
| || ||||| || || ||||||||||| |||||||| |||||||||||
Sbjct: 212 atgccaaaacctgaacccaagccagagccgatgccaaagccggagcctaagcc 264
Score = 56.0 bits (28), Expect = 3e-006
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 673 gagcctaagcctgagccgaaaccagaaccaaagccagagccacaaccaaagcctgagcct 732
||||||||||||||||| |||||||| || | |||| | || |||||||||| |||||
Sbjct: 35 gagcctaagcctgagcccaaaccagagccgatgccaaaacccgaaccaaagccagagccc 94
Query: 733 aaaccaga 740
||||||||
Sbjct: 95 aaaccaga 102
Score = 50.1 bits (25), Expect = 2e-004
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 691 aaaccagaaccaaagccagagccacaaccaaagcctgagcctaaaccagaaccaaaacca 750
||||| ||||||||||||||||| ||||| |||| ||| ||||| |||||||| |||
Sbjct: 71 aaacccgaaccaaagccagagcccaaaccagagccgatgccaaaacccgaaccaaagcca 130
Query: 751 gagcc 755
|||||
Sbjct: 131 gagcc 135
Score = 48.1 bits (24), Expect = 8e-004
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 721 aagcctgagcctaaaccagaaccaaaaccagagccaaagccagagcctaagcccga 776
||||||||||||||||| |||||||| || || ||||||||||| ||||||||
Sbjct: 152 aagcctgagcctaaaccgatgccaaaacccgaaccgaagccagagcccaagcccga 207
Score = 48.1 bits (24), Expect = 8e-004
Identities = 54/64 (84%)
Strand = Plus / Plus
Query: 956 agccaaagcctgagcctaaacccgaaccaagaccagaaccagaaccaaagccagagccta 1015
|||| ||||||||||| ||||| || || | ||| |||| ||||||||||||||||| |
Sbjct: 36 agcctaagcctgagcccaaaccagagccgatgccaaaacccgaaccaaagccagagccca 95
Query: 1016 aacc 1019
||||
Sbjct: 96 aacc 99
Score = 46.1 bits (23), Expect = 0.003
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 823 gaacctaagccagagccaaagcctgagccgaaaccgaaaccagatccaaagccagagcc 881
||||| ||||||||||| || || ||||||| || ||||| || ||||||||||||||
Sbjct: 77 gaaccaaagccagagcccaaaccagagccgatgccaaaacccgaaccaaagccagagcc 135
Score = 46.1 bits (23), Expect = 0.003
Identities = 65/79 (82%)
Strand = Plus / Plus
Query: 559 aaacccaaaccgaaaccagagccaaagccagagccacaaccaaaaccagagcctaagcca 618
|||||| |||| || |||||||| || |||||||| |||||||| || || ||||||
Sbjct: 71 aaacccgaaccaaagccagagcccaaaccagagccgatgccaaaacccgaaccaaagcca 130
Query: 619 gagcctaaacccgaaccga 637
||||| |||||||| ||||
Sbjct: 131 gagcccaaacccgagccga 149
Score = 46.1 bits (23), Expect = 0.003
Identities = 55/66 (83%), Gaps = 6/66 (9%)
Strand = Plus / Plus
Query: 1063 gagcctaagcctgatccaaaaccagagccta------aacccgaaccaaaaccagagccc 1116
|||||||||||||| || ||||||||||| | ||||||||||||| |||||||||
Sbjct: 35 gagcctaagcctgagcccaaaccagagccgatgccaaaacccgaaccaaagccagagccc 94
Query: 1117 caacca 1122
|||||
Sbjct: 95 aaacca 100
Score = 44.1 bits (22), Expect = 0.013
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 958 ccaaagcctgagcctaaacccgaaccaagaccagaaccagaaccaaagccagagcctaaa 1017
|||||||| ||||| ||||| || || | ||| |||| ||||||||||||||||| |||
Sbjct: 80 ccaaagccagagcccaaaccagagccgatgccaaaacccgaaccaaagccagagcccaaa 139
Query: 1018 cc 1019
||
Sbjct: 140 cc 141
Score = 44.1 bits (22), Expect = 0.013
Identities = 79/98 (80%)
Strand = Plus / Plus
Query: 826 cctaagccagagccaaagcctgagccgaaaccgaaaccagatccaaagccagagccacaa 885
|||||||| ||||| || || ||||||| || ||||| || |||||||||||||| ||
Sbjct: 38 cctaagcctgagcccaaaccagagccgatgccaaaacccgaaccaaagccagagcccaaa 97
Query: 886 ccaaagccagagcctaagccagaaccaaaaccagagcc 923
||| |||| ||| || || |||||||| ||||||||
Sbjct: 98 ccagagccgatgccaaaacccgaaccaaagccagagcc 135
Score = 42.1 bits (21), Expect = 0.051
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 921 gccaaagccagagcctaagcccgaaccaaaaccaaagccaaagcc 965
||||||||| |||||||||||||| || | ||||||||| ||||
Sbjct: 244 gccaaagccggagcctaagcccgagccgatgccaaagccagagcc 288
Score = 42.1 bits (21), Expect = 0.051
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 448 cccgaacctaagccagagcctaagcccga 476
|||||||| ||||||||||| ||||||||
Sbjct: 179 cccgaaccgaagccagagcccaagcccga 207
Score = 42.1 bits (21), Expect = 0.051
Identities = 54/65 (83%)
Strand = Plus / Plus
Query: 559 aaacccaaaccgaaaccagagccaaagccagagccacaaccaaaaccagagcctaagcca 618
|||||| ||||||| |||||||| ||||| ||||| |||||||| || || ||||||
Sbjct: 176 aaacccgaaccgaagccagagcccaagcccgagccgatgccaaaacctgaacccaagcca 235
Query: 619 gagcc 623
|||||
Sbjct: 236 gagcc 240
Score = 42.1 bits (21), Expect = 0.051
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1093 aaacccgaaccaaaaccagagccccaacc 1121
|||||||||||||| ||||||||| ||||
Sbjct: 113 aaacccgaaccaaagccagagcccaaacc 141
Score = 40.1 bits (20), Expect = 0.20
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 753 gccaaagccagagcctaagcccga 776
||||||||| ||||||||||||||
Sbjct: 244 gccaaagccggagcctaagcccga 267
>gb|BI778290.2|BI778290 EBro07_SQ002_M10_R root, 3 week, reduced light, cv Optic, EBro07
Hordeum vulgare subsp. vulgare cDNA clone
EBro07_SQ002_M10 5', mRNA sequence
Length = 582
Score = 58.0 bits (29), Expect = 9e-007
Identities = 92/113 (81%)
Strand = Plus / Plus
Query: 793 aagcctgagcctaaacccgaaccaaggccagaacctaagccagagccaaagcctgagccg 852
||||||||||||||||| |||| || ||||| ||||||||||| ||||| ||||||
Sbjct: 294 aagcctgagcctaaaccgatgccaaaacccgaaccgaagccagagcccaagcccgagccg 353
Query: 853 aaaccgaaaccagatccaaagccagagccacaaccaaagccagagcctaagcc 905
| || ||||| || || ||||||||||| |||||||| |||||||||||
Sbjct: 354 atgccaaaacctgaacccaagccagagccgatgccaaagccggagcctaagcc 406
Score = 56.0 bits (28), Expect = 3e-006
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 673 gagcctaagcctgagccgaaaccagaaccaaagccagagccacaaccaaagcctgagcct 732
||||||||||||||||| |||||||| || | |||| | || |||||||||| |||||
Sbjct: 177 gagcctaagcctgagcccaaaccagagccgatgccaaaacccgaaccaaagccagagccc 236
Query: 733 aaaccaga 740
||||||||
Sbjct: 237 aaaccaga 244
Score = 54.0 bits (27), Expect = 1e-005
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 823 gaacctaagccagagccaaagcctgagccgaaaccgaaaccagatccaaagccagagcc 881
||||| ||||||||||| ||||| ||||||| || ||||| || ||||||||||||||
Sbjct: 51 gaaccaaagccagagcctaagcccgagccgatgccaaaacccgaaccaaagccagagcc 109
Score = 54.0 bits (27), Expect = 1e-005
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 910 ccaaaaccagagccaaagccagagcctaagcccga 944
|||||||| || |||||||||||||||||||||||
Sbjct: 42 ccaaaacccgaaccaaagccagagcctaagcccga 76
Score = 54.0 bits (27), Expect = 1e-005
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 742 ccaaaaccagagccaaagccagagcctaagcccga 776
|||||||| || |||||||||||||||||||||||
Sbjct: 42 ccaaaacccgaaccaaagccagagcctaagcccga 76
Score = 52.0 bits (26), Expect = 5e-005
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 495 gccaaaacctgaaccaaaaccagagcctaagccagagc 532
||||||||| |||||||| |||||||||||||| ||||
Sbjct: 41 gccaaaacccgaaccaaagccagagcctaagcccgagc 78
Score = 50.1 bits (25), Expect = 2e-004
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 691 aaaccagaaccaaagccagagccacaaccaaagcctgagcctaaaccagaaccaaaacca 750
||||| ||||||||||||||||| ||||| |||| ||| ||||| |||||||| |||
Sbjct: 213 aaacccgaaccaaagccagagcccaaaccagagccgatgccaaaacccgaaccaaagcca 272
Query: 751 gagcc 755
|||||
Sbjct: 273 gagcc 277
Score = 50.1 bits (25), Expect = 2e-004
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 448 cccgaacctaagccagagcctaagcccga 476
|||||||| ||||||||||||||||||||
Sbjct: 48 cccgaaccaaagccagagcctaagcccga 76
Score = 50.1 bits (25), Expect = 2e-004
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 829 aagccagagccaaagcctgagccgaaaccgaaaccagatccaaagccagagcc 881
||||||||||| ||||| ||||||| || ||||| || ||||||||||||||
Sbjct: 15 aagccagagcccaagcccgagccgatgccaaaacccgaaccaaagccagagcc 67
Score = 48.1 bits (24), Expect = 8e-004
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 721 aagcctgagcctaaaccagaaccaaaaccagagccaaagccagagcctaagcccga 776
||||||||||||||||| |||||||| || || ||||||||||| ||||||||
Sbjct: 294 aagcctgagcctaaaccgatgccaaaacccgaaccgaagccagagcccaagcccga 349
Score = 48.1 bits (24), Expect = 8e-004
Identities = 54/64 (84%)
Strand = Plus / Plus
Query: 956 agccaaagcctgagcctaaacccgaaccaagaccagaaccagaaccaaagccagagccta 1015
|||| ||||||||||| ||||| || || | ||| |||| ||||||||||||||||| |
Sbjct: 178 agcctaagcctgagcccaaaccagagccgatgccaaaacccgaaccaaagccagagccca 237
Query: 1016 aacc 1019
||||
Sbjct: 238 aacc 241
Score = 48.1 bits (24), Expect = 8e-004
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 958 ccaaagcctgagcctaaacccgaaccaagaccagaaccagaaccaaagccagagcc 1013
|||||||| |||||||| ||||| || | ||| |||| |||||||||||||||||
Sbjct: 54 ccaaagccagagcctaagcccgagccgatgccaaaacccgaaccaaagccagagcc 109
Score = 48.1 bits (24), Expect = 8e-004
Identities = 56/67 (83%), Gaps = 6/67 (8%)
Strand = Plus / Plus
Query: 884 aaccaaagccagagcctaagccagaacc------aaaaccagagccaaagccagagccta 937
|||||||||||||||||||||| || || |||||| || |||||||||||||| |
Sbjct: 52 aaccaaagccagagcctaagcccgagccgatgccaaaacccgaaccaaagccagagccca 111
Query: 938 agcccga 944
|||||||
Sbjct: 112 agcccga 118
Score = 46.1 bits (23), Expect = 0.003
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 823 gaacctaagccagagccaaagcctgagccgaaaccgaaaccagatccaaagccagagcc 881
||||| ||||||||||| || || ||||||| || ||||| || ||||||||||||||
Sbjct: 219 gaaccaaagccagagcccaaaccagagccgatgccaaaacccgaaccaaagccagagcc 277
Score = 46.1 bits (23), Expect = 0.003
Identities = 65/79 (82%)
Strand = Plus / Plus
Query: 559 aaacccaaaccgaaaccagagccaaagccagagccacaaccaaaaccagagcctaagcca 618
|||||| |||| || |||||||| || |||||||| |||||||| || || ||||||
Sbjct: 213 aaacccgaaccaaagccagagcccaaaccagagccgatgccaaaacccgaaccaaagcca 272
Query: 619 gagcctaaacccgaaccga 637
||||| |||||||| ||||
Sbjct: 273 gagcccaaacccgagccga 291
Score = 46.1 bits (23), Expect = 0.003
Identities = 55/66 (83%), Gaps = 6/66 (9%)
Strand = Plus / Plus
Query: 1063 gagcctaagcctgatccaaaaccagagccta------aacccgaaccaaaaccagagccc 1116
|||||||||||||| || ||||||||||| | ||||||||||||| |||||||||
Sbjct: 177 gagcctaagcctgagcccaaaccagagccgatgccaaaacccgaaccaaagccagagccc 236
Query: 1117 caacca 1122
|||||
Sbjct: 237 aaacca 242
Score = 46.1 bits (23), Expect = 0.003
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 823 gaacctaagccagagccaaagcctgagccgaaaccgaaaccagatccaaagccagagcc 881
||||| ||||||||||| ||||| ||||||| |||||||| || || ||||| |||||
Sbjct: 93 gaaccaaagccagagcccaagcccgagccgatgccgaaacccgaaccgaagcctgagcc 151
Score = 46.1 bits (23), Expect = 0.003
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 742 ccaaaaccagagccaaagccagagcctaagcccga 776
|||||||| || |||||||||||||| ||||||||
Sbjct: 84 ccaaaacccgaaccaaagccagagcccaagcccga 118
Score = 46.1 bits (23), Expect = 0.003
Identities = 49/58 (84%), Gaps = 6/58 (10%)
Strand = Plus / Plus
Query: 662 aacctaagccagagcctaagcctgagccg------aaaccagaaccaaagccagagcc 713
|||| ||||||||||||||||| |||||| ||||| |||||||||||||||||
Sbjct: 52 aaccaaagccagagcctaagcccgagccgatgccaaaacccgaaccaaagccagagcc 109
Score = 46.1 bits (23), Expect = 0.003
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 805 aaacccgaaccaaggccagaacctaagccagagcc 839
||||||||||||| |||||| |||||||| |||||
Sbjct: 45 aaacccgaaccaaagccagagcctaagcccgagcc 79
Score = 44.1 bits (22), Expect = 0.013
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 958 ccaaagcctgagcctaaacccgaaccaagaccagaaccagaaccaaagccagagcctaaa 1017
|||||||| ||||| ||||| || || | ||| |||| ||||||||||||||||| |||
Sbjct: 222 ccaaagccagagcccaaaccagagccgatgccaaaacccgaaccaaagccagagcccaaa 281
Query: 1018 cc 1019
||
Sbjct: 282 cc 283
Score = 44.1 bits (22), Expect = 0.013
Identities = 79/98 (80%)
Strand = Plus / Plus
Query: 826 cctaagccagagccaaagcctgagccgaaaccgaaaccagatccaaagccagagccacaa 885
|||||||| ||||| || || ||||||| || ||||| || |||||||||||||| ||
Sbjct: 180 cctaagcctgagcccaaaccagagccgatgccaaaacccgaaccaaagccagagcccaaa 239
Query: 886 ccaaagccagagcctaagccagaaccaaaaccagagcc 923
||| |||| ||| || || |||||||| ||||||||
Sbjct: 240 ccagagccgatgccaaaacccgaaccaaagccagagcc 277
Score = 44.1 bits (22), Expect = 0.013
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1052 aaccaaagccagagcctaagcc 1073
||||||||||||||||||||||
Sbjct: 52 aaccaaagccagagcctaagcc 73
Score = 44.1 bits (22), Expect = 0.013
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 959 caaagcctgagcctaaacccgaaccaagaccagaaccagaaccaaagccagagcctaa 1016
||||||| ||||| || ||||| || | ||| |||| ||||||||||||||||||||
Sbjct: 13 caaagccagagcccaagcccgagccgatgccaaaacccgaaccaaagccagagcctaa 70
Score = 42.1 bits (21), Expect = 0.051
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 921 gccaaagccagagcctaagcccgaaccaaaaccaaagccaaagcc 965
||||||||| |||||||||||||| || | ||||||||| ||||
Sbjct: 386 gccaaagccggagcctaagcccgagccgatgccaaagccagagcc 430
Score = 42.1 bits (21), Expect = 0.051
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 448 cccgaacctaagccagagcctaagcccga 476
|||||||| ||||||||||| ||||||||
Sbjct: 321 cccgaaccgaagccagagcccaagcccga 349
Score = 42.1 bits (21), Expect = 0.051
Identities = 54/65 (83%)
Strand = Plus / Plus
Query: 559 aaacccaaaccgaaaccagagccaaagccagagccacaaccaaaaccagagcctaagcca 618
|||||| ||||||| |||||||| ||||| ||||| |||||||| || || ||||||
Sbjct: 318 aaacccgaaccgaagccagagcccaagcccgagccgatgccaaaacctgaacccaagcca 377
Query: 619 gagcc 623
|||||
Sbjct: 378 gagcc 382
Score = 42.1 bits (21), Expect = 0.051
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1093 aaacccgaaccaaaaccagagccccaacc 1121
|||||||||||||| ||||||||| ||||
Sbjct: 255 aaacccgaaccaaagccagagcccaaacc 283
Score = 42.1 bits (21), Expect = 0.051
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 448 cccgaacctaagccagagcctaagcccga 476
|||||||| ||||||||||| ||||||||
Sbjct: 90 cccgaaccaaagccagagcccaagcccga 118
Score = 40.1 bits (20), Expect = 0.20
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 753 gccaaagccagagcctaagcccga 776
||||||||| ||||||||||||||
Sbjct: 386 gccaaagccggagcctaagcccga 409
Score = 40.1 bits (20), Expect = 0.20
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 772 cccgaaccaaaaccagagccaaagcctgagcc 803
||||||||||| |||||||| ||||| |||||
Sbjct: 90 cccgaaccaaagccagagcccaagcccgagcc 121
Score = 40.1 bits (20), Expect = 0.20
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1093 aaacccgaaccaaaaccagagccc 1116
|||||||||||||| |||||||||
Sbjct: 87 aaacccgaaccaaagccagagccc 110
Score = 40.1 bits (20), Expect = 0.20
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 1148 aaccacagccagaacctaagcccgagcc 1175
||||| ||||||| ||||||||||||||
Sbjct: 52 aaccaaagccagagcctaagcccgagcc 79
Score = 40.1 bits (20), Expect = 0.20
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 596 aaccaaaaccagagcctaagccagagcc 623
||||||| |||||||||||||| |||||
Sbjct: 52 aaccaaagccagagcctaagcccgagcc 79
Score = 40.1 bits (20), Expect = 0.20
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 772 cccgaaccaaaaccagagccaaagcctgagcc 803
||||||||||| |||||||| ||||| |||||
Sbjct: 48 cccgaaccaaagccagagcctaagcccgagcc 79
Score = 40.1 bits (20), Expect = 0.20
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 598 ccaaaaccagagcctaagccagagcctaaacccgaaccga 637
|||||||| || || |||||||||||||| ||||| ||||
Sbjct: 42 ccaaaacccgaaccaaagccagagcctaagcccgagccga 81
>gb|BU995464.1|BU995464 HM10F12r HM Hordeum vulgare subsp. vulgare cDNA clone HM10F12
5-PRIME, mRNA sequence
Length = 651
Score = 58.0 bits (29), Expect = 9e-007
Identities = 92/113 (81%)
Strand = Plus / Plus
Query: 793 aagcctgagcctaaacccgaaccaaggccagaacctaagccagagccaaagcctgagccg 852
||||||||||||||||| |||| || ||||| ||||||||||| ||||| ||||||
Sbjct: 371 aagcctgagcctaaaccgatgccaaaacccgaaccgaagccagagcccaagcccgagccg 430
Query: 853 aaaccgaaaccagatccaaagccagagccacaaccaaagccagagcctaagcc 905
| || ||||| || || ||||||||||| |||||||| |||||||||||
Sbjct: 431 atgccaaaacctgaacccaagccagagccgatgccaaagccggagcctaagcc 483
Score = 58.0 bits (29), Expect = 9e-007
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 829 aagccagagccaaagcctgagccgaaaccgaaaccagatccaaagccagagcc 881
||||||||||| ||||| ||||||| |||||||| || ||||||||||||||
Sbjct: 50 aagccagagcccaagcccgagccgatgccgaaaccggaaccaaagccagagcc 102
Score = 56.0 bits (28), Expect = 3e-006
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 673 gagcctaagcctgagccgaaaccagaaccaaagccagagccacaaccaaagcctgagcct 732
||||||||||||||||| |||||||| || | |||| | || |||||||||| |||||
Sbjct: 254 gagcctaagcctgagcccaaaccagagccgatgccaaaacccgaaccaaagccagagccc 313
Query: 733 aaaccaga 740
||||||||
Sbjct: 314 aaaccaga 321
Score = 54.0 bits (27), Expect = 1e-005
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 823 gaacctaagccagagccaaagcctgagccgaaaccgaaaccagatccaaagccagagcc 881
||||| ||||||||||| ||||| ||||||| || ||||| || ||||||||||||||
Sbjct: 128 gaaccaaagccagagcctaagcccgagccgatgccaaaacccgaaccaaagccagagcc 186
Score = 54.0 bits (27), Expect = 1e-005
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 910 ccaaaaccagagccaaagccagagcctaagcccga 944
|||||||| || |||||||||||||||||||||||
Sbjct: 119 ccaaaacccgaaccaaagccagagcctaagcccga 153
Score = 54.0 bits (27), Expect = 1e-005
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 742 ccaaaaccagagccaaagccagagcctaagcccga 776
|||||||| || |||||||||||||||||||||||
Sbjct: 119 ccaaaacccgaaccaaagccagagcctaagcccga 153
Score = 54.0 bits (27), Expect = 1e-005
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 823 gaacctaagccagagccaaagcctgagccgaaaccgaaaccagatccaaagccagagcc 881
||||| ||||||||||| ||||| ||||||| || ||||| || ||||||||||||||
Sbjct: 86 gaaccaaagccagagcccaagcccgagccgatgccaaaacccgaaccaaagccagagcc 144
Score = 52.0 bits (26), Expect = 5e-005
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 495 gccaaaacctgaaccaaaaccagagcctaagccagagc 532
||||||||| |||||||| |||||||||||||| ||||
Sbjct: 118 gccaaaacccgaaccaaagccagagcctaagcccgagc 155
Score = 50.1 bits (25), Expect = 2e-004
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 691 aaaccagaaccaaagccagagccacaaccaaagcctgagcctaaaccagaaccaaaacca 750
||||| ||||||||||||||||| ||||| |||| ||| ||||| |||||||| |||
Sbjct: 290 aaacccgaaccaaagccagagcccaaaccagagccgatgccaaaacccgaaccaaagcca 349
Query: 751 gagcc 755
|||||
Sbjct: 350 gagcc 354
Score = 50.1 bits (25), Expect = 2e-004
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 448 cccgaacctaagccagagcctaagcccga 476
|||||||| ||||||||||||||||||||
Sbjct: 125 cccgaaccaaagccagagcctaagcccga 153
Score = 50.1 bits (25), Expect = 2e-004
Identities = 67/81 (82%)
Strand = Plus / Plus
Query: 687 gccgaaaccagaaccaaagccagagccacaaccaaagcctgagcctaaaccagaaccaaa 746
||||||||| ||||||||||||||||| | || |||| ||| ||||| ||||||||
Sbjct: 76 gccgaaaccggaaccaaagccagagcccaagcccgagccgatgccaaaacccgaaccaaa 135
Query: 747 accagagccaaagccagagcc 767
|||||||| ||||| |||||
Sbjct: 136 gccagagcctaagcccgagcc 156
Score = 48.1 bits (24), Expect = 8e-004
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 721 aagcctgagcctaaaccagaaccaaaaccagagccaaagccagagcctaagcccga 776
||||||||||||||||| |||||||| || || ||||||||||| ||||||||
Sbjct: 371 aagcctgagcctaaaccgatgccaaaacccgaaccgaagccagagcccaagcccga 426
Score = 48.1 bits (24), Expect = 8e-004
Identities = 54/64 (84%)
Strand = Plus / Plus
Query: 956 agccaaagcctgagcctaaacccgaaccaagaccagaaccagaaccaaagccagagccta 1015
|||| ||||||||||| ||||| || || | ||| |||| ||||||||||||||||| |
Sbjct: 255 agcctaagcctgagcccaaaccagagccgatgccaaaacccgaaccaaagccagagccca 314
Query: 1016 aacc 1019
||||
Sbjct: 315 aacc 318
Score = 48.1 bits (24), Expect = 8e-004
Identities = 56/67 (83%), Gaps = 6/67 (8%)
Strand = Plus / Plus
Query: 884 aaccaaagccagagcctaagccagaacc------aaaaccagagccaaagccagagccta 937
|||||||||||||||||||||| || || |||||| || |||||||||||||| |
Sbjct: 129 aaccaaagccagagcctaagcccgagccgatgccaaaacccgaaccaaagccagagccca 188
Query: 938 agcccga 944
|||||||
Sbjct: 189 agcccga 195
Score = 48.1 bits (24), Expect = 8e-004
Identities = 86/107 (80%), Gaps = 6/107 (5%)
Strand = Plus / Plus
Query: 913 aaaccagagccaaagccagagcctaagcccga------accaaaaccaaagccaaagcct 966
||||| || |||||||||||||| |||||||| |||||||| | ||||||||
Sbjct: 80 aaaccggaaccaaagccagagcccaagcccgagccgatgccaaaacccgaaccaaagcca 139
Query: 967 gagcctaaacccgaaccaagaccagaaccagaaccaaagccagagcc 1013
|||||||| ||||| || | ||| |||| |||||||||||||||||
Sbjct: 140 gagcctaagcccgagccgatgccaaaacccgaaccaaagccagagcc 186
Score = 46.1 bits (23), Expect = 0.003
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 823 gaacctaagccagagccaaagcctgagccgaaaccgaaaccagatccaaagccagagcc 881
||||| ||||||||||| || || ||||||| || ||||| || ||||||||||||||
Sbjct: 296 gaaccaaagccagagcccaaaccagagccgatgccaaaacccgaaccaaagccagagcc 354
Score = 46.1 bits (23), Expect = 0.003
Identities = 65/79 (82%)
Strand = Plus / Plus
Query: 559 aaacccaaaccgaaaccagagccaaagccagagccacaaccaaaaccagagcctaagcca 618
|||||| |||| || |||||||| || |||||||| |||||||| || || ||||||
Sbjct: 290 aaacccgaaccaaagccagagcccaaaccagagccgatgccaaaacccgaaccaaagcca 349
Query: 619 gagcctaaacccgaaccga 637
||||| |||||||| ||||
Sbjct: 350 gagcccaaacccgagccga 368
Score = 46.1 bits (23), Expect = 0.003
Identities = 55/66 (83%), Gaps = 6/66 (9%)
Strand = Plus / Plus
Query: 1063 gagcctaagcctgatccaaaaccagagccta------aacccgaaccaaaaccagagccc 1116
|||||||||||||| || ||||||||||| | ||||||||||||| |||||||||
Sbjct: 254 gagcctaagcctgagcccaaaccagagccgatgccaaaacccgaaccaaagccagagccc 313
Query: 1117 caacca 1122
|||||
Sbjct: 314 aaacca 319
Score = 46.1 bits (23), Expect = 0.003
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 742 ccaaaaccagagccaaagccagagcctaagcccga 776
|||||||| || |||||||||||||| ||||||||
Sbjct: 161 ccaaaacccgaaccaaagccagagcccaagcccga 195
Score = 46.1 bits (23), Expect = 0.003
Identities = 49/58 (84%), Gaps = 6/58 (10%)
Strand = Plus / Plus
Query: 662 aacctaagccagagcctaagcctgagccg------aaaccagaaccaaagccagagcc 713
|||| ||||||||||||||||| |||||| ||||| |||||||||||||||||
Sbjct: 129 aaccaaagccagagcctaagcccgagccgatgccaaaacccgaaccaaagccagagcc 186
Score = 46.1 bits (23), Expect = 0.003
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 805 aaacccgaaccaaggccagaacctaagccagagcc 839
||||||||||||| |||||| |||||||| |||||
Sbjct: 122 aaacccgaaccaaagccagagcctaagcccgagcc 156
Score = 46.1 bits (23), Expect = 0.003
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 958 ccaaagcctgagcctaaacccgaaccaagaccagaaccagaaccaaagccagagcctaa 1016
|||||||| ||||| || ||||| || | ||| |||| ||||||||||||||||||||
Sbjct: 89 ccaaagccagagcccaagcccgagccgatgccaaaacccgaaccaaagccagagcctaa 147
Score = 46.1 bits (23), Expect = 0.003
Identities = 117/149 (78%), Gaps = 12/149 (8%)
Strand = Plus / Plus
Query: 745 aaaccagagccaaagccagagcctaagcccga------accaaaaccagagccaaagcct 798
||||| || |||||||||||||| |||||||| |||||||| || ||||||||
Sbjct: 80 aaaccggaaccaaagccagagcccaagcccgagccgatgccaaaacccgaaccaaagcca 139
Query: 799 gagcctaaacccgaaccaaggcca------gaacctaagccagagccaaagcctgagccg 852
|||||||| ||||| || | |||| ||||| ||||||||||| ||||| ||||||
Sbjct: 140 gagcctaagcccgagccgatgccaaaacccgaaccaaagccagagcccaagcccgagccg 199
Query: 853 aaaccgaaaccagatccaaagccagagcc 881
| |||||||| || || ||||| |||||
Sbjct: 200 atgccgaaacccgaaccgaagcctgagcc 228
Score = 46.1 bits (23), Expect = 0.003
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 634 ccgaaaccggagccaaagccagagccc 660
||||||||||| |||||||||||||||
Sbjct: 77 ccgaaaccggaaccaaagccagagccc 103
Score = 44.1 bits (22), Expect = 0.013
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 958 ccaaagcctgagcctaaacccgaaccaagaccagaaccagaaccaaagccagagcctaaa 1017
|||||||| ||||| ||||| || || | ||| |||| ||||||||||||||||| |||
Sbjct: 299 ccaaagccagagcccaaaccagagccgatgccaaaacccgaaccaaagccagagcccaaa 358
Query: 1018 cc 1019
||
Sbjct: 359 cc 360
Score = 44.1 bits (22), Expect = 0.013
Identities = 79/98 (80%)
Strand = Plus / Plus
Query: 826 cctaagccagagccaaagcctgagccgaaaccgaaaccagatccaaagccagagccacaa 885
|||||||| ||||| || || ||||||| || ||||| || |||||||||||||| ||
Sbjct: 257 cctaagcctgagcccaaaccagagccgatgccaaaacccgaaccaaagccagagcccaaa 316
Query: 886 ccaaagccagagcctaagccagaaccaaaaccagagcc 923
||| |||| ||| || || |||||||| ||||||||
Sbjct: 317 ccagagccgatgccaaaacccgaaccaaagccagagcc 354
Score = 44.1 bits (22), Expect = 0.013
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1052 aaccaaagccagagcctaagcc 1073
||||||||||||||||||||||
Sbjct: 129 aaccaaagccagagcctaagcc 150
Score = 42.1 bits (21), Expect = 0.051
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 921 gccaaagccagagcctaagcccgaaccaaaaccaaagccaaagcc 965
||||||||| |||||||||||||| || | ||||||||| ||||
Sbjct: 463 gccaaagccggagcctaagcccgagccgatgccaaagccagagcc 507
Score = 42.1 bits (21), Expect = 0.051
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 448 cccgaacctaagccagagcctaagcccga 476
|||||||| ||||||||||| ||||||||
Sbjct: 398 cccgaaccgaagccagagcccaagcccga 426
Score = 42.1 bits (21), Expect = 0.051
Identities = 54/65 (83%)
Strand = Plus / Plus
Query: 559 aaacccaaaccgaaaccagagccaaagccagagccacaaccaaaaccagagcctaagcca 618
|||||| ||||||| |||||||| ||||| ||||| |||||||| || || ||||||
Sbjct: 395 aaacccgaaccgaagccagagcccaagcccgagccgatgccaaaacctgaacccaagcca 454
Query: 619 gagcc 623
|||||
Sbjct: 455 gagcc 459
Score = 42.1 bits (21), Expect = 0.051
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1093 aaacccgaaccaaaaccagagccccaacc 1121
|||||||||||||| ||||||||| ||||
Sbjct: 332 aaacccgaaccaaagccagagcccaaacc 360
Score = 42.1 bits (21), Expect = 0.051
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 448 cccgaacctaagccagagcctaagcccga 476
|||||||| ||||||||||| ||||||||
Sbjct: 167 cccgaaccaaagccagagcccaagcccga 195
Score = 42.1 bits (21), Expect = 0.051
Identities = 54/65 (83%)
Strand = Plus / Plus
Query: 907 gaaccaaaaccagagccaaagccagagcctaagcccgaaccaaaaccaaagccaaagcct 966
|||||||| |||||||| ||||| ||||| | ||| |||| ||||||||||| |||||
Sbjct: 86 gaaccaaagccagagcccaagcccgagccgatgccaaaacccgaaccaaagccagagcct 145
Query: 967 gagcc 971
||||
Sbjct: 146 aagcc 150
Score = 40.1 bits (20), Expect = 0.20
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 753 gccaaagccagagcctaagcccga 776
||||||||| ||||||||||||||
Sbjct: 463 gccaaagccggagcctaagcccga 486
Score = 40.1 bits (20), Expect = 0.20
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1093 aaacccgaaccaaaaccagagccc 1116
|||||||||||||| |||||||||
Sbjct: 164 aaacccgaaccaaagccagagccc 187
Score = 40.1 bits (20), Expect = 0.20
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 1148 aaccacagccagaacctaagcccgagcc 1175
||||| ||||||| ||||||||||||||
Sbjct: 129 aaccaaagccagagcctaagcccgagcc 156
Score = 40.1 bits (20), Expect = 0.20
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 596 aaccaaaaccagagcctaagccagagcc 623
||||||| |||||||||||||| |||||
Sbjct: 129 aaccaaagccagagcctaagcccgagcc 156
Score = 40.1 bits (20), Expect = 0.20
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 598 ccaaaaccagagcctaagccagagcctaaacccgaaccga 637
|||||||| || || |||||||||||||| ||||| ||||
Sbjct: 119 ccaaaacccgaaccaaagccagagcctaagcccgagccga 158
Score = 40.1 bits (20), Expect = 0.20
Identities = 42/48 (87%), Gaps = 1/48 (2%)
Strand = Plus / Plus
Query: 613 aagccagagcctaaacccgaaccgaaaccggagccaaagccagagccc 660
||||||||||||||||| ||||||||||| || ||||||||||||
Sbjct: 15 aagccagagcctaaaccgatgccgaaaccggaacc-aagccagagccc 61
>gb|CB875789.1|CB875789 HX09F15w HX Hordeum vulgare subsp. vulgare cDNA clone HX09F15
3-PRIME, mRNA sequence
Length = 647
Score = 58.0 bits (29), Expect = 9e-007
Identities = 92/113 (81%)
Strand = Plus / Minus
Query: 793 aagcctgagcctaaacccgaaccaaggccagaacctaagccagagccaaagcctgagccg 852
||||||||||||||||| |||| || ||||| ||||||||||| ||||| ||||||
Sbjct: 579 aagcctgagcctaaaccgatgccaaaacccgaaccgaagccagagcccaagcccgagccg 520
Query: 853 aaaccgaaaccagatccaaagccagagccacaaccaaagccagagcctaagcc 905
| || ||||| || || ||||||||||| |||||||| |||||||||||
Sbjct: 519 atgccaaaacctgaacccaagccagagccgatgccaaagccggagcctaagcc 467
Score = 48.1 bits (24), Expect = 8e-004
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 721 aagcctgagcctaaaccagaaccaaaaccagagccaaagccagagcctaagcccga 776
||||||||||||||||| |||||||| || || ||||||||||| ||||||||
Sbjct: 579 aagcctgagcctaaaccgatgccaaaacccgaaccgaagccagagcccaagcccga 524
Score = 42.1 bits (21), Expect = 0.051
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 1093 aaacccgaaccaaaaccagagccccaacc 1121
|||||||||||||| ||||||||| ||||
Sbjct: 618 aaacccgaaccaaagccagagcccaaacc 590
Score = 42.1 bits (21), Expect = 0.051
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 448 cccgaacctaagccagagcctaagcccga 476
|||||||| ||||||||||| ||||||||
Sbjct: 552 cccgaaccgaagccagagcccaagcccga 524
Score = 42.1 bits (21), Expect = 0.051
Identities = 54/65 (83%)
Strand = Plus / Minus
Query: 559 aaacccaaaccgaaaccagagccaaagccagagccacaaccaaaaccagagcctaagcca 618
|||||| ||||||| |||||||| ||||| ||||| |||||||| || || ||||||
Sbjct: 555 aaacccgaaccgaagccagagcccaagcccgagccgatgccaaaacctgaacccaagcca 496
Query: 619 gagcc 623
|||||
Sbjct: 495 gagcc 491
Score = 42.1 bits (21), Expect = 0.051
Identities = 39/45 (86%)
Strand = Plus / Minus
Query: 921 gccaaagccagagcctaagcccgaaccaaaaccaaagccaaagcc 965
||||||||| |||||||||||||| || | ||||||||| ||||
Sbjct: 487 gccaaagccggagcctaagcccgagccgatgccaaagccagagcc 443
Score = 40.1 bits (20), Expect = 0.20
Identities = 44/52 (84%)
Strand = Plus / Minus
Query: 830 agccagagccaaagcctgagccgaaaccgaaaccagatccaaagccagagcc 881
|||||||||| || || ||||||| || ||||| || ||||||||||||||
Sbjct: 647 agccagagcccaaaccagagccgatgccaaaacccgaaccaaagccagagcc 596
Score = 40.1 bits (20), Expect = 0.20
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 992 aaccagaaccaaagccagagcctaaacc 1019
|||| ||||||||||||||||| |||||
Sbjct: 617 aacccgaaccaaagccagagcccaaacc 590
Score = 40.1 bits (20), Expect = 0.20
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 598 ccaaaaccagagcctaagccagagcctaaacccgaaccga 637
|||||||| || || ||||||||||| |||||||| ||||
Sbjct: 621 ccaaaacccgaaccaaagccagagcccaaacccgagccga 582
Score = 40.1 bits (20), Expect = 0.20
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 753 gccaaagccagagcctaagcccga 776
||||||||| ||||||||||||||
Sbjct: 487 gccaaagccggagcctaagcccga 464
>gb|BI959527.1|BI959527 HVSMEn0020A21f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0020A21f, mRNA sequence
Length = 646
Score = 56.0 bits (28), Expect = 3e-006
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 613 aagccagagcctaaacccgaaccgaaaccggagccaaagccagagccc 660
||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 534 aagccagagcctaaaccgatgccgaaaccggaaccaaagccagagccc 581
Score = 54.0 bits (27), Expect = 1e-005
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 667 aagccagagcctaagcctgagccgaaaccagaaccaaagccagagcc 713
|||||||||||||| || ||||||||| |||||||||||||||||
Sbjct: 534 aagccagagcctaaaccgatgccgaaaccggaaccaaagccagagcc 580
Score = 54.0 bits (27), Expect = 1e-005
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 547 aagccagagcctaaacccaaaccgaaaccagagccaaagccagagcc 593
||||||||||||||||| | |||||||| || ||||||||||||||
Sbjct: 534 aagccagagcctaaaccgatgccgaaaccggaaccaaagccagagcc 580
Score = 42.1 bits (21), Expect = 0.051
Identities = 54/65 (83%)
Strand = Plus / Plus
Query: 691 aaaccagaaccaaagccagagccacaaccaaagcctgagcctaaaccagaaccaaaacca 750
||||||||||| || || ||||| |||| ||||| ||||||||||||||| |||||
Sbjct: 423 aaaccagaaccgaaacctgagcccaaacctgagcctatgcctaaaccagaaccgaaacct 482
Query: 751 gagcc 755
|||||
Sbjct: 483 gagcc 487
Score = 42.1 bits (21), Expect = 0.051
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 729 gcctaaaccagaaccaaaaccagagccaaagccagagccta 769
||||||||||||||| ||||| ||||| || || |||||||
Sbjct: 419 gcctaaaccagaaccgaaacctgagcccaaacctgagccta 459
Score = 40.1 bits (20), Expect = 0.20
Identities = 47/56 (83%)
Strand = Plus / Plus
Query: 889 aagccagagcctaagccagaaccaaaaccagagccaaagccagagcctaagcccga 944
|||||||||||||| || || ||||| || |||||||||||||| ||||||||
Sbjct: 534 aagccagagcctaaaccgatgccgaaaccggaaccaaagccagagcccaagcccga 589
Score = 40.1 bits (20), Expect = 0.20
Identities = 47/56 (83%)
Strand = Plus / Plus
Query: 721 aagcctgagcctaaaccagaaccaaaaccagagccaaagccagagcctaagcccga 776
||||| ||||||||||| || ||||| || |||||||||||||| ||||||||
Sbjct: 534 aagccagagcctaaaccgatgccgaaaccggaaccaaagccagagcccaagcccga 589
>gb|AV915377.1|AV915377 AV915377 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags14c13 5', mRNA sequence
Length = 765
Score = 56.0 bits (28), Expect = 3e-006
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 673 gagcctaagcctgagccgaaaccagaaccaaagccagagccacaaccaaagcctgagcct 732
||||||||||||||||| |||||||| || | |||| | || |||||||||| |||||
Sbjct: 392 gagcctaagcctgagcccaaaccagagccgatgccaaaacccgaaccaaagccagagccc 451
Query: 733 aaaccaga 740
||||||||
Sbjct: 452 aaaccaga 459
Score = 54.0 bits (27), Expect = 1e-005
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 823 gaacctaagccagagccaaagcctgagccgaaaccgaaaccagatccaaagccagagcc 881
||||| ||||||||||| ||||| ||||||| || ||||| || ||||||||||||||
Sbjct: 222 gaaccaaagccagagcccaagcccgagccgatgccaaaacccgaaccaaagccagagcc 280
Score = 52.0 bits (26), Expect = 5e-005
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 946 ccaaaaccaaagccaaagcctgagcctaaacccgaaccaagaccagaaccagaaccaaag 1005
|||||||| |||| ||||||||||| ||||| || || | ||| |||| |||||||||
Sbjct: 383 ccaaaacctgagcctaagcctgagcccaaaccagagccgatgccaaaacccgaaccaaag 442
Query: 1006 ccagagcctaaacc 1019
|||||||| |||||
Sbjct: 443 ccagagcccaaacc 456
Score = 50.1 bits (25), Expect = 2e-004
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 691 aaaccagaaccaaagccagagccacaaccaaagcctgagcctaaaccagaaccaaaacca 750
||||| ||||||||||||||||| ||||| |||| ||| ||||| |||||||| |||
Sbjct: 428 aaacccgaaccaaagccagagcccaaaccagagccgatgccaaaacccgaaccaaagcca 487
Query: 751 gagcc 755
|||||
Sbjct: 488 gagcc 492
Score = 50.1 bits (25), Expect = 2e-004
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 613 aagccagagcctaaacccgaaccgaaaccggagccaaagccagagccc 660
||||||||| ||||||| ||||||||||| |||||||||||||||
Sbjct: 192 aagccagagnctaaaccgatgccgaaaccggaaccaaagccagagccc 239
Score = 50.1 bits (25), Expect = 2e-004
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 535 aaacctgagccaaagccagagcctaaacccaaaccga 571
|||||||| |||||||||||||| |||||| ||||||
Sbjct: 153 aaacctgaaccaaagccagagcccaaacccgaaccga 189
Score = 48.1 bits (24), Expect = 8e-004
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 721 aagcctgagcctaaaccagaaccaaaaccagagccaaagccagagcctaagcccga 776
||||||||||||||||| |||||||| || || ||||||||||| ||||||||
Sbjct: 509 aagcctgagcctaaaccgatgccaaaacccgaaccgaagccagagcccaagcccga 564
Score = 48.1 bits (24), Expect = 8e-004
Identities = 62/75 (82%), Gaps = 6/75 (8%)
Strand = Plus / Plus
Query: 1054 ccaaagccagagcctaagcctgatccaaaaccagagccta------aacccgaaccaaaa 1107
||||| || |||||||||||||| || ||||||||||| | |||||||||||||
Sbjct: 383 ccaaaacctgagcctaagcctgagcccaaaccagagccgatgccaaaacccgaaccaaag 442
Query: 1108 ccagagccccaacca 1122
||||||||| |||||
Sbjct: 443 ccagagcccaaacca 457
Score = 48.1 bits (24), Expect = 8e-004
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 667 aagccagagcctaagcctgagccgaaaccagaaccaaagccagagcc 713
||||||||| |||| || ||||||||| |||||||||||||||||
Sbjct: 192 aagccagagnctaaaccgatgccgaaaccggaaccaaagccagagcc 238
Score = 48.1 bits (24), Expect = 8e-004
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 547 aagccagagcctaaacccaaaccgaaaccagagccaaagccagagcc 593
||||||||| ||||||| | |||||||| || ||||||||||||||
Sbjct: 192 aagccagagnctaaaccgatgccgaaaccggaaccaaagccagagcc 238
Score = 48.1 bits (24), Expect = 8e-004
Identities = 68/83 (81%)
Strand = Plus / Plus
Query: 555 gcctaaacccaaaccgaaaccagagccaaagccagagccacaaccaaaaccagagcctaa 614
||||||||| |||||||||| ||||| || || ||||| || ||||| || || ||
Sbjct: 107 gcctaaaccagaaccgaaaccggagcccaaacctgagcccatgccnaaacctgaaccaaa 166
Query: 615 gccagagcctaaacccgaaccga 637
||||||||| |||||||||||||
Sbjct: 167 gccagagcccaaacccgaaccga 189
Score = 48.1 bits (24), Expect = 8e-004
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 621 gcctaaacccgaaccgaaaccggagccaaagccagagccc 660
||||||||| ||||||||||||||||| || || ||||||
Sbjct: 107 gcctaaaccagaaccgaaaccggagcccaaacctgagccc 146
Score = 46.1 bits (23), Expect = 0.003
Identities = 65/79 (82%)
Strand = Plus / Plus
Query: 559 aaacccaaaccgaaaccagagccaaagccagagccacaaccaaaaccagagcctaagcca 618
|||||| |||| || |||||||| || |||||||| |||||||| || || ||||||
Sbjct: 428 aaacccgaaccaaagccagagcccaaaccagagccgatgccaaaacccgaaccaaagcca 487
Query: 619 gagcctaaacccgaaccga 637
||||| |||||||| ||||
Sbjct: 488 gagcccaaacccgagccga 506
Score = 46.1 bits (23), Expect = 0.003
Identities = 88/110 (80%), Gaps = 6/110 (5%)
Strand = Plus / Plus
Query: 778 ccaaaaccagagccaaagcctgagcctaaacccgaaccaaggcca------gaacctaag 831
|||||||| ||||| ||||||||||| ||||| || || | |||| ||||| |||
Sbjct: 383 ccaaaacctgagcctaagcctgagcccaaaccagagccgatgccaaaacccgaaccaaag 442
Query: 832 ccagagccaaagcctgagccgaaaccgaaaccagatccaaagccagagcc 881
|||||||| || || ||||||| || ||||| || ||||||||||||||
Sbjct: 443 ccagagcccaaaccagagccgatgccaaaacccgaaccaaagccagagcc 492
Score = 44.1 bits (22), Expect = 0.013
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 958 ccaaagcctgagcctaaacccgaaccaagaccagaaccagaaccaaagccagagcctaaa 1017
|||||||| ||||| ||||| || || | ||| |||| ||||||||||||||||| |||
Sbjct: 437 ccaaagccagagcccaaaccagagccgatgccaaaacccgaaccaaagccagagcccaaa 496
Query: 1018 cc 1019
||
Sbjct: 497 cc 498
Score = 44.1 bits (22), Expect = 0.013
Identities = 79/98 (80%)
Strand = Plus / Plus
Query: 826 cctaagccagagccaaagcctgagccgaaaccgaaaccagatccaaagccagagccacaa 885
|||||||| ||||| || || ||||||| || ||||| || |||||||||||||| ||
Sbjct: 395 cctaagcctgagcccaaaccagagccgatgccaaaacccgaaccaaagccagagcccaaa 454
Query: 886 ccaaagccagagcctaagccagaaccaaaaccagagcc 923
||| |||| ||| || || |||||||| ||||||||
Sbjct: 455 ccagagccgatgccaaaacccgaaccaaagccagagcc 492
Score = 44.1 bits (22), Expect = 0.013
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 992 aaccagaaccaaagccagagcctaaacctgaacc 1025
|||| ||||||||||||||||| ||||| |||||
Sbjct: 154 aacctgaaccaaagccagagcccaaacccgaacc 187
Score = 42.1 bits (21), Expect = 0.051
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 448 cccgaacctaagccagagcctaagcccga 476
|||||||| ||||||||||| ||||||||
Sbjct: 536 cccgaaccgaagccagagcccaagcccga 564
Score = 42.1 bits (21), Expect = 0.051
Identities = 51/61 (83%)
Strand = Plus / Plus
Query: 793 aagcctgagcctaaacccgaaccaaggccagaacctaagccagagccaaagcctgagccg 852
||||||||||||||||| |||| || ||||| ||||||||||| ||||| ||||||
Sbjct: 509 aagcctgagcctaaaccgatgccaaaacccgaaccgaagccagagcccaagcccgagccg 568
Query: 853 a 853
|
Sbjct: 569 a 569
Score = 42.1 bits (21), Expect = 0.051
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1093 aaacccgaaccaaaaccagagccccaacc 1121
|||||||||||||| ||||||||| ||||
Sbjct: 470 aaacccgaaccaaagccagagcccaaacc 498
Score = 42.1 bits (21), Expect = 0.051
Identities = 54/65 (83%)
Strand = Plus / Plus
Query: 691 aaaccagaaccaaagccagagccacaaccaaagcctgagcctaaaccagaaccaaaacca 750
||||||||||| || || ||||| |||| ||||| ||||||||||||||| |||||
Sbjct: 69 aaaccagaaccgaaacctgagcccaaacctgagcctatgcctaaaccagaaccgaaaccg 128
Query: 751 gagcc 755
|||||
Sbjct: 129 gagcc 133
Score = 42.1 bits (21), Expect = 0.051
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 729 gcctaaaccagaaccaaaaccagagccaaagccagagccta 769
||||||||||||||| ||||| ||||| || || |||||||
Sbjct: 65 gcctaaaccagaaccgaaacctgagcccaaacctgagccta 105
Score = 40.1 bits (20), Expect = 0.20
Identities = 65/80 (81%)
Strand = Plus / Plus
Query: 1078 ccaaaaccagagcctaaacccgaaccaaaaccagagccccaaccaaaaccagaacctaag 1137
|||||||| |||||||| || || || ||||||||||| |||||||| ||||| |||
Sbjct: 383 ccaaaacctgagcctaagcctgagcccaaaccagagccgatgccaaaacccgaaccaaag 442
Query: 1138 cccgaaccaaaaccacagcc 1157
|| || || |||||| ||||
Sbjct: 443 ccagagcccaaaccagagcc 462
Score = 40.1 bits (20), Expect = 0.20
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 598 ccaaaaccagagcctaagccagagcctaaacc 629
|||||||| ||||||||||| ||||| |||||
Sbjct: 383 ccaaaacctgagcctaagcctgagcccaaacc 414
Score = 40.1 bits (20), Expect = 0.20
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1093 aaacccgaaccaaaaccagagccc 1116
|||||||||||||| |||||||||
Sbjct: 258 aaacccgaaccaaagccagagccc 281
Score = 40.1 bits (20), Expect = 0.20
Identities = 47/56 (83%)
Strand = Plus / Plus
Query: 958 ccaaagcctgagcctaaacccgaaccaagaccagaaccagaaccaaagccagagcc 1013
|||||||| ||||| || ||||| || | ||| |||| |||||||||||||||||
Sbjct: 225 ccaaagccagagcccaagcccgagccgatgccaaaacccgaaccaaagccagagcc 280
Score = 40.1 bits (20), Expect = 0.20
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 913 aaaccagagccaaagccagagcctaagcccga 944
||||| || |||||||||||||| ||||||||
Sbjct: 216 aaaccggaaccaaagccagagcccaagcccga 247
Score = 40.1 bits (20), Expect = 0.20
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 745 aaaccagagccaaagccagagcctaagcccga 776
||||| || |||||||||||||| ||||||||
Sbjct: 216 aaaccggaaccaaagccagagcccaagcccga 247
Score = 40.1 bits (20), Expect = 0.20
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 1072 cctgatccaaaaccagagcctaaacccgaacc 1103
||||| ||||| |||||||| |||||||||||
Sbjct: 156 cctgaaccaaagccagagcccaaacccgaacc 187
>gb|AV923369.1|AV923369 AV923369 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd12n21 5', mRNA sequence
Length = 646
Score = 56.0 bits (28), Expect = 3e-006
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 613 aagccagagcctaaacccgaaccgaaaccggagccaaagccagagccc 660
||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 557 aagccagagcctaaaccgatgccgaaaccggaaccaaagccagagccc 604
Score = 54.0 bits (27), Expect = 1e-005
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 667 aagccagagcctaagcctgagccgaaaccagaaccaaagccagagcc 713
|||||||||||||| || ||||||||| |||||||||||||||||
Sbjct: 557 aagccagagcctaaaccgatgccgaaaccggaaccaaagccagagcc 603
Score = 54.0 bits (27), Expect = 1e-005
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 547 aagccagagcctaaacccaaaccgaaaccagagccaaagccagagcc 593
||||||||||||||||| | |||||||| || ||||||||||||||
Sbjct: 557 aagccagagcctaaaccgatgccgaaaccggaaccaaagccagagcc 603
Score = 54.0 bits (27), Expect = 1e-005
Identities = 69/83 (83%)
Strand = Plus / Plus
Query: 555 gcctaaacccaaaccgaaaccagagccaaagccagagccacaaccaaaaccagagcctaa 614
||||||||| |||||||||| ||||| || || ||||| |||||||| || || ||
Sbjct: 472 gcctaaaccagaaccgaaaccggagcccaaacctgagcccatgccaaaacctgaaccaaa 531
Query: 615 gccagagcctaaacccgaaccga 637
||||||||| |||||||||||||
Sbjct: 532 gccagagcccaaacccgaaccga 554
Score = 54.0 bits (27), Expect = 1e-005
Identities = 163/209 (77%), Gaps = 12/209 (5%)
Strand = Plus / Plus
Query: 613 aagccagagcctaaacccgaaccgaaaccggagccaaagccagagccccaacctaagcca 672
||||||||||| || || ||||| || |||||||| | |||| |||| | |||||||||
Sbjct: 350 aagccagagcccaagccggaacccaagccggagccgatgccaaagccagagcctaagcca 409
Query: 673 gagcctaagcctgagccg------aaaccagaaccaaagccagagccacaaccaaagcct 726
|| || ||||| |||||| ||||||||||| || || ||||| |||| |||||
Sbjct: 410 gaacccaagcccgagccgatgcctaaaccagaaccgaaacctgagcccaaacctgagcct 469
Query: 727 gagcctaaaccagaaccaaaaccagagccaaagccagagcctaagcccgaaccaaaacca 786
||||||||||||||| ||||| ||||| || || ||||| | | ||||||||
Sbjct: 470 atgcctaaaccagaaccgaaaccggagcccaaacctgagcccatg------ccaaaacct 523
Query: 787 gagccaaagcctgagcctaaacccgaacc 815
|| |||||||| ||||| |||||||||||
Sbjct: 524 gaaccaaagccagagcccaaacccgaacc 552
Score = 52.0 bits (26), Expect = 5e-005
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 886 ccaaagccagagcctaagccagaacc 911
||||||||||||||||||||||||||
Sbjct: 389 ccaaagccagagcctaagccagaacc 414
Score = 50.1 bits (25), Expect = 2e-004
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 535 aaacctgagccaaagccagagcctaaacccaaaccga 571
|||||||| |||||||||||||| |||||| ||||||
Sbjct: 518 aaacctgaaccaaagccagagcccaaacccgaaccga 554
Score = 48.1 bits (24), Expect = 8e-004
Identities = 120/152 (78%)
Strand = Plus / Plus
Query: 814 ccaaggccagaacctaagccagagccaaagcctgagccgaaaccgaaaccagatccaaag 873
|||| |||||| ||||||||||| || ||||| ||||||| || |||||||| || ||
Sbjct: 389 ccaaagccagagcctaagccagaacccaagcccgagccgatgcctaaaccagaaccgaaa 448
Query: 874 ccagagccacaaccaaagccagagcctaagccagaaccaaaaccagagccaaagccagag 933
|| ||||| |||| |||| |||||| |||||||| ||||| ||||| || || |||
Sbjct: 449 cctgagcccaaacctgagcctatgcctaaaccagaaccgaaaccggagcccaaacctgag 508
Query: 934 cctaagcccgaaccaaaaccaaagccaaagcc 965
|| | ||| |||| ||||||||||| ||||
Sbjct: 509 cccatgccaaaacctgaaccaaagccagagcc 540
Score = 46.1 bits (23), Expect = 0.003
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 495 gccaaaacctgaaccaaaaccagagcc 521
|||||||||||||||||| ||||||||
Sbjct: 514 gccaaaacctgaaccaaagccagagcc 540
Score = 46.1 bits (23), Expect = 0.003
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 921 gccaaagccagagcctaagcccgaacc 947
||||||||||||||||||||| |||||
Sbjct: 388 gccaaagccagagcctaagccagaacc 414
Score = 44.1 bits (22), Expect = 0.013
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 992 aaccagaaccaaagccagagcctaaacctgaacc 1025
|||| ||||||||||||||||| ||||| |||||
Sbjct: 519 aacctgaaccaaagccagagcccaaacccgaacc 552
Score = 44.1 bits (22), Expect = 0.013
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 910 ccaaaaccagagccaaagccagagcctaagcccgaacc 947
|||||||| || |||||||||||||| || ||||||||
Sbjct: 515 ccaaaacctgaaccaaagccagagcccaaacccgaacc 552
Score = 40.1 bits (20), Expect = 0.20
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 1072 cctgatccaaaaccagagcctaaacccgaacc 1103
||||| ||||| |||||||| |||||||||||
Sbjct: 521 cctgaaccaaagccagagcccaaacccgaacc 552
Score = 40.1 bits (20), Expect = 0.20
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 598 ccaaaaccagagcctaagccagagcctaaacccgaaccga 637
||||| ||||||||||||||||| || || ||||| ||||
Sbjct: 389 ccaaagccagagcctaagccagaacccaagcccgagccga 428
Score = 40.1 bits (20), Expect = 0.20
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1054 ccaaagccagagcctaagcc 1073
||||||||||||||||||||
Sbjct: 389 ccaaagccagagcctaagcc 408
>gb|AV928555.1|AV928555 AV928555 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basdn21 3', mRNA sequence
Length = 713
Score = 56.0 bits (28), Expect = 3e-006
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 613 aagccagagcctaaacccgaaccgaaaccggagccaaagccagagccc 660
||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 446 aagccagagcctaaaccgatgccgaaaccggaaccaaagccagagccc 399
Score = 54.0 bits (27), Expect = 1e-005
Identities = 163/209 (77%), Gaps = 12/209 (5%)
Strand = Plus / Minus
Query: 613 aagccagagcctaaacccgaaccgaaaccggagccaaagccagagccccaacctaagcca 672
||||||||||| || || ||||| || |||||||| | |||| |||| | |||||||||
Sbjct: 653 aagccagagcccaagccggaacccaagccggagccgatgccaaagccagagcctaagcca 594
Query: 673 gagcctaagcctgagccg------aaaccagaaccaaagccagagccacaaccaaagcct 726
|| || ||||| |||||| ||||||||||| || || ||||| |||| |||||
Sbjct: 593 gaacccaagcccgagccgatgcctaaaccagaaccgaaacctgagcccaaacctgagcct 534
Query: 727 gagcctaaaccagaaccaaaaccagagccaaagccagagcctaagcccgaaccaaaacca 786
||||||||||||||| ||||| ||||| || || ||||| | | ||||||||
Sbjct: 533 atgcctaaaccagaaccgaaaccggagcccaaacctgagcccatg------ccaaaacct 480
Query: 787 gagccaaagcctgagcctaaacccgaacc 815
|| |||||||| ||||| |||||||||||
Sbjct: 479 gaaccaaagccagagcccaaacccgaacc 451
Score = 54.0 bits (27), Expect = 1e-005
Identities = 69/83 (83%)
Strand = Plus / Minus
Query: 555 gcctaaacccaaaccgaaaccagagccaaagccagagccacaaccaaaaccagagcctaa 614
||||||||| |||||||||| ||||| || || ||||| |||||||| || || ||
Sbjct: 531 gcctaaaccagaaccgaaaccggagcccaaacctgagcccatgccaaaacctgaaccaaa 472
Query: 615 gccagagcctaaacccgaaccga 637
||||||||| |||||||||||||
Sbjct: 471 gccagagcccaaacccgaaccga 449
Score = 54.0 bits (27), Expect = 1e-005
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 547 aagccagagcctaaacccaaaccgaaaccagagccaaagccagagcc 593
||||||||||||||||| | |||||||| || ||||||||||||||
Sbjct: 446 aagccagagcctaaaccgatgccgaaaccggaaccaaagccagagcc 400
Score = 54.0 bits (27), Expect = 1e-005
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 667 aagccagagcctaagcctgagccgaaaccagaaccaaagccagagcc 713
|||||||||||||| || ||||||||| |||||||||||||||||
Sbjct: 446 aagccagagcctaaaccgatgccgaaaccggaaccaaagccagagcc 400
Score = 52.0 bits (26), Expect = 5e-005
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 886 ccaaagccagagcctaagccagaacc 911
||||||||||||||||||||||||||
Sbjct: 614 ccaaagccagagcctaagccagaacc 589
Score = 50.1 bits (25), Expect = 2e-004
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 535 aaacctgagccaaagccagagcctaaacccaaaccga 571
|||||||| |||||||||||||| |||||| ||||||
Sbjct: 485 aaacctgaaccaaagccagagcccaaacccgaaccga 449
Score = 48.1 bits (24), Expect = 8e-004
Identities = 120/152 (78%)
Strand = Plus / Minus
Query: 814 ccaaggccagaacctaagccagagccaaagcctgagccgaaaccgaaaccagatccaaag 873
|||| |||||| ||||||||||| || ||||| ||||||| || |||||||| || ||
Sbjct: 614 ccaaagccagagcctaagccagaacccaagcccgagccgatgcctaaaccagaaccgaaa 555
Query: 874 ccagagccacaaccaaagccagagcctaagccagaaccaaaaccagagccaaagccagag 933
|| ||||| |||| |||| |||||| |||||||| ||||| ||||| || || |||
Sbjct: 554 cctgagcccaaacctgagcctatgcctaaaccagaaccgaaaccggagcccaaacctgag 495
Query: 934 cctaagcccgaaccaaaaccaaagccaaagcc 965
|| | ||| |||| ||||||||||| ||||
Sbjct: 494 cccatgccaaaacctgaaccaaagccagagcc 463
Score = 46.1 bits (23), Expect = 0.003
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 921 gccaaagccagagcctaagcccgaacc 947
||||||||||||||||||||| |||||
Sbjct: 615 gccaaagccagagcctaagccagaacc 589
Score = 46.1 bits (23), Expect = 0.003
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 495 gccaaaacctgaaccaaaaccagagcc 521
|||||||||||||||||| ||||||||
Sbjct: 489 gccaaaacctgaaccaaagccagagcc 463
Score = 44.1 bits (22), Expect = 0.013
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 910 ccaaaaccagagccaaagccagagcctaagcccgaacc 947
|||||||| || |||||||||||||| || ||||||||
Sbjct: 488 ccaaaacctgaaccaaagccagagcccaaacccgaacc 451
Score = 44.1 bits (22), Expect = 0.013
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 992 aaccagaaccaaagccagagcctaaacctgaacc 1025
|||| ||||||||||||||||| ||||| |||||
Sbjct: 484 aacctgaaccaaagccagagcccaaacccgaacc 451
Score = 40.1 bits (20), Expect = 0.20
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1054 ccaaagccagagcctaagcc 1073
||||||||||||||||||||
Sbjct: 614 ccaaagccagagcctaagcc 595
Score = 40.1 bits (20), Expect = 0.20
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 598 ccaaaaccagagcctaagccagagcctaaacccgaaccga 637
||||| ||||||||||||||||| || || ||||| ||||
Sbjct: 614 ccaaagccagagcctaagccagaacccaagcccgagccga 575
Score = 40.1 bits (20), Expect = 0.20
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 1072 cctgatccaaaaccagagcctaaacccgaacc 1103
||||| ||||| |||||||| |||||||||||
Sbjct: 482 cctgaaccaaagccagagcccaaacccgaacc 451
>gb|BJ447901.1|BJ447901 BJ447901 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak17k22 5', mRNA sequence
Length = 725
Score = 56.0 bits (28), Expect = 3e-006
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 673 gagcctaagcctgagccgaaaccagaaccaaagccagagccacaaccaaagcctgagcct 732
||||||||||||||||| |||||||| || | |||| | || |||||||||| |||||
Sbjct: 29 gagcctaagcctgagcccaaaccagagccgatgccaaaacccgaaccaaagccagagccc 88
Query: 733 aaaccaga 740
||||||||
Sbjct: 89 aaaccaga 96
Score = 52.0 bits (26), Expect = 5e-005
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 946 ccaaaaccaaagccaaagcctgagcctaaacccgaaccaagaccagaaccagaaccaaag 1005
|||||||| |||| ||||||||||| ||||| || || | ||| |||| |||||||||
Sbjct: 20 ccaaaacctgagcctaagcctgagcccaaaccagagccgatgccaaaacccgaaccaaag 79
Query: 1006 ccagagcctaaacc 1019
|||||||| |||||
Sbjct: 80 ccagagcccaaacc 93
Score = 50.1 bits (25), Expect = 2e-004
Identities = 73/89 (82%)
Strand = Plus / Plus
Query: 793 aagcctgagcctaaacccgaaccaaggccagaacctaagccagagccaaagcctgagccg 852
||||||||||||||||| |||| || ||||| ||||||||||| ||||| ||||||
Sbjct: 146 aagcctgagcctaaaccgatgccaaaacccgaaccgaagccagagcccaagcccgagccg 205
Query: 853 aaaccgaaaccagatccaaagccagagcc 881
| || ||||| || || |||||||||||
Sbjct: 206 atgccaaaacctgaacccaagccagagcc 234
Score = 50.1 bits (25), Expect = 2e-004
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 691 aaaccagaaccaaagccagagccacaaccaaagcctgagcctaaaccagaaccaaaacca 750
||||| ||||||||||||||||| ||||| |||| ||| ||||| |||||||| |||
Sbjct: 65 aaacccgaaccaaagccagagcccaaaccagagccgatgccaaaacccgaaccaaagcca 124
Query: 751 gagcc 755
|||||
Sbjct: 125 gagcc 129
Score = 48.1 bits (24), Expect = 8e-004
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 721 aagcctgagcctaaaccagaaccaaaaccagagccaaagccagagcctaagcccga 776
||||||||||||||||| |||||||| || || ||||||||||| ||||||||
Sbjct: 146 aagcctgagcctaaaccgatgccaaaacccgaaccgaagccagagcccaagcccga 201
Score = 48.1 bits (24), Expect = 8e-004
Identities = 62/75 (82%), Gaps = 6/75 (8%)
Strand = Plus / Plus
Query: 1054 ccaaagccagagcctaagcctgatccaaaaccagagccta------aacccgaaccaaaa 1107
||||| || |||||||||||||| || ||||||||||| | |||||||||||||
Sbjct: 20 ccaaaacctgagcctaagcctgagcccaaaccagagccgatgccaaaacccgaaccaaag 79
Query: 1108 ccagagccccaacca 1122
||||||||| |||||
Sbjct: 80 ccagagcccaaacca 94
Score = 46.1 bits (23), Expect = 0.003
Identities = 68/83 (81%)
Strand = Plus / Plus
Query: 823 gaacctaagccagagccaaagcctgagccgaaaccgaaaccagatccaaagccagagcca 882
||||| ||||||||||| ||||| ||||||| || ||||| || || ||||| |||||
Sbjct: 248 gaaccgaagccagagcccaagcccgagccgatgccaaaacctgaacccaagcccgagccg 307
Query: 883 caaccaaagccagagcctaagcc 905
|||||||||||||| |||||
Sbjct: 308 atgccaaagccagagcccaagcc 330
Score = 46.1 bits (23), Expect = 0.003
Identities = 65/79 (82%)
Strand = Plus / Plus
Query: 559 aaacccaaaccgaaaccagagccaaagccagagccacaaccaaaaccagagcctaagcca 618
|||||| |||| || |||||||| || |||||||| |||||||| || || ||||||
Sbjct: 65 aaacccgaaccaaagccagagcccaaaccagagccgatgccaaaacccgaaccaaagcca 124
Query: 619 gagcctaaacccgaaccga 637
||||| |||||||| ||||
Sbjct: 125 gagcccaaacccgagccga 143
Score = 46.1 bits (23), Expect = 0.003
Identities = 88/110 (80%), Gaps = 6/110 (5%)
Strand = Plus / Plus
Query: 778 ccaaaaccagagccaaagcctgagcctaaacccgaaccaaggcca------gaacctaag 831
|||||||| ||||| ||||||||||| ||||| || || | |||| ||||| |||
Sbjct: 20 ccaaaacctgagcctaagcctgagcccaaaccagagccgatgccaaaacccgaaccaaag 79
Query: 832 ccagagccaaagcctgagccgaaaccgaaaccagatccaaagccagagcc 881
|||||||| || || ||||||| || ||||| || ||||||||||||||
Sbjct: 80 ccagagcccaaaccagagccgatgccaaaacccgaaccaaagccagagcc 129
Score = 44.1 bits (22), Expect = 0.013
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 958 ccaaagcctgagcctaaacccgaaccaagaccagaaccagaaccaaagccagagcctaaa 1017
|||||||| ||||| ||||| || || | ||| |||| ||||||||||||||||| |||
Sbjct: 74 ccaaagccagagcccaaaccagagccgatgccaaaacccgaaccaaagccagagcccaaa 133
Query: 1018 cc 1019
||
Sbjct: 134 cc 135
Score = 44.1 bits (22), Expect = 0.013
Identities = 79/98 (80%)
Strand = Plus / Plus
Query: 826 cctaagccagagccaaagcctgagccgaaaccgaaaccagatccaaagccagagccacaa 885
|||||||| ||||| || || ||||||| || ||||| || |||||||||||||| ||
Sbjct: 32 cctaagcctgagcccaaaccagagccgatgccaaaacccgaaccaaagccagagcccaaa 91
Query: 886 ccaaagccagagcctaagccagaaccaaaaccagagcc 923
||| |||| ||| || || |||||||| ||||||||
Sbjct: 92 ccagagccgatgccaaaacccgaaccaaagccagagcc 129
Score = 42.1 bits (21), Expect = 0.051
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 448 cccgaacctaagccagagcctaagcccga 476
|||||||| ||||||||||| ||||||||
Sbjct: 245 cccgaaccgaagccagagcccaagcccga 273
Score = 42.1 bits (21), Expect = 0.051
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 448 cccgaacctaagccagagcctaagcccga 476
|||||||| ||||||||||| ||||||||
Sbjct: 173 cccgaaccgaagccagagcccaagcccga 201
Score = 42.1 bits (21), Expect = 0.051
Identities = 54/65 (83%)
Strand = Plus / Plus
Query: 559 aaacccaaaccgaaaccagagccaaagccagagccacaaccaaaaccagagcctaagcca 618
|||||| ||||||| |||||||| ||||| ||||| |||||||| || || ||||||
Sbjct: 170 aaacccgaaccgaagccagagcccaagcccgagccgatgccaaaacctgaacccaagcca 229
Query: 619 gagcc 623
|||||
Sbjct: 230 gagcc 234
Score = 42.1 bits (21), Expect = 0.051
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1093 aaacccgaaccaaaaccagagccccaacc 1121
|||||||||||||| ||||||||| ||||
Sbjct: 107 aaacccgaaccaaagccagagcccaaacc 135
Score = 40.1 bits (20), Expect = 0.20
Identities = 65/80 (81%)
Strand = Plus / Plus
Query: 1078 ccaaaaccagagcctaaacccgaaccaaaaccagagccccaaccaaaaccagaacctaag 1137
|||||||| |||||||| || || || ||||||||||| |||||||| ||||| |||
Sbjct: 20 ccaaaacctgagcctaagcctgagcccaaaccagagccgatgccaaaacccgaaccaaag 79
Query: 1138 cccgaaccaaaaccacagcc 1157
|| || || |||||| ||||
Sbjct: 80 ccagagcccaaaccagagcc 99
Score = 40.1 bits (20), Expect = 0.20
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 598 ccaaaaccagagcctaagccagagcctaaacc 629
|||||||| ||||||||||| ||||| |||||
Sbjct: 20 ccaaaacctgagcctaagcctgagcccaaacc 51
>gb|BJ469217.1|BJ469217 BJ469217 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal13l10 5', mRNA sequence
Length = 495
Score = 56.0 bits (28), Expect = 3e-006
Identities = 91/112 (81%)
Strand = Plus / Plus
Query: 629 ccgaaccgaaaccggagccaaagccagagccccaacctaagccagagcctaagcctgagc 688
||||||||||||||||||| || || |||||| || || || || || ||||||||||
Sbjct: 36 ccgaaccgaaaccggagcccaaacctgagcccatgccaaaacctgaaccaaagcctgagc 95
Query: 689 cgaaaccagaaccaaagccagagccacaaccaaagcctgagcctaaaccaga 740
| |||||||| || | |||| | || |||||||||| ||||| ||||||||
Sbjct: 96 ccaaaccagagccgatgccaaaacccgaaccaaagccagagcccaaaccaga 147
Score = 52.0 bits (26), Expect = 5e-005
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 958 ccaaagcctgagcctaaacccgaaccaagaccagaaccagaaccaaagccagagcctaaa 1017
|||||||||||||| ||||| || || | ||| |||| ||||||||||||||||| |||
Sbjct: 83 ccaaagcctgagcccaaaccagagccgatgccaaaacccgaaccaaagccagagcccaaa 142
Query: 1018 cc 1019
||
Sbjct: 143 cc 144
Score = 50.1 bits (25), Expect = 2e-004
Identities = 73/89 (82%)
Strand = Plus / Plus
Query: 793 aagcctgagcctaaacccgaaccaaggccagaacctaagccagagccaaagcctgagccg 852
||||||||||||||||| |||| || ||||| ||||||||||| ||||| ||||||
Sbjct: 197 aagcctgagcctaaaccgatgccaaaacccgaaccgaagccagagcccaagcccgagccg 256
Query: 853 aaaccgaaaccagatccaaagccagagcc 881
| || ||||| || || |||||||||||
Sbjct: 257 atgccaaaacctgaacccaagccagagcc 285
Score = 50.1 bits (25), Expect = 2e-004
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 691 aaaccagaaccaaagccagagccacaaccaaagcctgagcctaaaccagaaccaaaacca 750
||||| ||||||||||||||||| ||||| |||| ||| ||||| |||||||| |||
Sbjct: 116 aaacccgaaccaaagccagagcccaaaccagagccgatgccaaaacccgaaccaaagcca 175
Query: 751 gagcc 755
|||||
Sbjct: 176 gagcc 180
Score = 50.1 bits (25), Expect = 2e-004
Identities = 64/77 (83%)
Strand = Plus / Plus
Query: 691 aaaccagaaccaaagccagagccacaaccaaagcctgagcctaaaccagaaccaaaacca 750
||||| ||||||||||| ||||| ||||| |||| ||| ||||| |||||||| |||
Sbjct: 74 aaacctgaaccaaagcctgagcccaaaccagagccgatgccaaaacccgaaccaaagcca 133
Query: 751 gagccaaagccagagcc 767
||||| || ||||||||
Sbjct: 134 gagcccaaaccagagcc 150
Score = 48.1 bits (24), Expect = 8e-004
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 721 aagcctgagcctaaaccagaaccaaaaccagagccaaagccagagcctaagcccga 776
||||||||||||||||| |||||||| || || ||||||||||| ||||||||
Sbjct: 197 aagcctgagcctaaaccgatgccaaaacccgaaccgaagccagagcccaagcccga 252
Score = 46.1 bits (23), Expect = 0.003
Identities = 68/83 (81%)
Strand = Plus / Plus
Query: 823 gaacctaagccagagccaaagcctgagccgaaaccgaaaccagatccaaagccagagcca 882
||||| ||||||||||| || || ||||||| || ||||| || || |||||||||||
Sbjct: 299 gaaccgaagccagagcccaaacccgagccgatgccaaaacctgaacccaagccagagccg 358
Query: 883 caaccaaagccagagcctaagcc 905
|||||||| |||||||||||
Sbjct: 359 atgccaaagccggagcctaagcc 381
Score = 46.1 bits (23), Expect = 0.003
Identities = 65/79 (82%)
Strand = Plus / Plus
Query: 559 aaacccaaaccgaaaccagagccaaagccagagccacaaccaaaaccagagcctaagcca 618
|||||| |||| || |||||||| || |||||||| |||||||| || || ||||||
Sbjct: 116 aaacccgaaccaaagccagagcccaaaccagagccgatgccaaaacccgaaccaaagcca 175
Query: 619 gagcctaaacccgaaccga 637
||||| |||||||| ||||
Sbjct: 176 gagcccaaacccgagccga 194
Score = 46.1 bits (23), Expect = 0.003
Identities = 88/110 (80%), Gaps = 6/110 (5%)
Strand = Plus / Plus
Query: 778 ccaaaaccagagccaaagcctgagcctaaacccgaaccaaggcca------gaacctaag 831
|||||||| || |||||||||||||| ||||| || || | |||| ||||| |||
Sbjct: 71 ccaaaacctgaaccaaagcctgagcccaaaccagagccgatgccaaaacccgaaccaaag 130
Query: 832 ccagagccaaagcctgagccgaaaccgaaaccagatccaaagccagagcc 881
|||||||| || || ||||||| || ||||| || ||||||||||||||
Sbjct: 131 ccagagcccaaaccagagccgatgccaaaacccgaaccaaagccagagcc 180
Score = 44.1 bits (22), Expect = 0.013
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 958 ccaaagcctgagcctaaacccgaaccaagaccagaaccagaaccaaagccagagcctaaa 1017
|||||||| ||||| ||||| || || | ||| |||| ||||||||||||||||| |||
Sbjct: 125 ccaaagccagagcccaaaccagagccgatgccaaaacccgaaccaaagccagagcccaaa 184
Query: 1018 cc 1019
||
Sbjct: 185 cc 186
Score = 44.1 bits (22), Expect = 0.013
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 1093 aaacccgaaccaaaaccagagccccaacca 1122
|||||||||||||| ||||||||| |||||
Sbjct: 116 aaacccgaaccaaagccagagcccaaacca 145
Score = 44.1 bits (22), Expect = 0.013
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 495 gccaaaacctgaaccaaaaccagagcctaagccagagc 532
|||||||||||||||||| || ||||| || |||||||
Sbjct: 70 gccaaaacctgaaccaaagcctgagcccaaaccagagc 107
Score = 42.1 bits (21), Expect = 0.051
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 921 gccaaagccagagcctaagcccgaaccaaaaccaaagccaaagcc 965
||||||||| |||||||||||||| || | ||||||||| ||||
Sbjct: 361 gccaaagccggagcctaagcccgagccgatgccaaagccagagcc 405
Score = 42.1 bits (21), Expect = 0.051
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 448 cccgaacctaagccagagcctaagcccga 476
|||||||| ||||||||||| ||||||||
Sbjct: 224 cccgaaccgaagccagagcccaagcccga 252
Score = 42.1 bits (21), Expect = 0.051
Identities = 54/65 (83%)
Strand = Plus / Plus
Query: 559 aaacccaaaccgaaaccagagccaaagccagagccacaaccaaaaccagagcctaagcca 618
|||||| ||||||| |||||||| ||||| ||||| |||||||| || || ||||||
Sbjct: 221 aaacccgaaccgaagccagagcccaagcccgagccgatgccaaaacctgaacccaagcca 280
Query: 619 gagcc 623
|||||
Sbjct: 281 gagcc 285
Score = 42.1 bits (21), Expect = 0.051
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1093 aaacccgaaccaaaaccagagccccaacc 1121
|||||||||||||| ||||||||| ||||
Sbjct: 158 aaacccgaaccaaagccagagcccaaacc 186
Score = 42.1 bits (21), Expect = 0.051
Identities = 81/101 (80%)
Strand = Plus / Plus
Query: 823 gaacctaagccagagccaaagcctgagccgaaaccgaaaccagatccaaagccagagcca 882
||||| ||||| ||||| || || ||||||| || ||||| || ||||||||||||||
Sbjct: 80 gaaccaaagcctgagcccaaaccagagccgatgccaaaacccgaaccaaagccagagccc 139
Query: 883 caaccaaagccagagcctaagccagaaccaaaaccagagcc 923
||||| |||| ||| || || |||||||| ||||||||
Sbjct: 140 aaaccagagccgatgccaaaacccgaaccaaagccagagcc 180
Score = 40.1 bits (20), Expect = 0.20
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 753 gccaaagccagagcctaagcccga 776
||||||||| ||||||||||||||
Sbjct: 361 gccaaagccggagcctaagcccga 384
Score = 40.1 bits (20), Expect = 0.20
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 598 ccaaaaccagagcctaagccagagcctaaacccgaaccga 637
|||||||| || || ||||||||||| |||||||| ||||
Sbjct: 290 ccaaaacccgaaccgaagccagagcccaaacccgagccga 329
>gb|BQ766471.1|BQ766471 EBro08_SQ006_L02_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ006_L02 5', mRNA sequence
Length = 561
Score = 56.0 bits (28), Expect = 3e-006
Identities = 87/107 (81%), Gaps = 6/107 (5%)
Strand = Plus / Plus
Query: 673 gagcctaagcctgagccgaaaccagaaccaaagccagagccacaaccaaagcctgagcct 732
||||||||||||||||| |||||||| || | |||| | || |||||||||| |||||
Sbjct: 33 gagcctaagcctgagcccaaaccagagccgatgccaaaacccgaaccaaagccagagccc 92
Query: 733 aaaccagaacc------aaaaccagagccaaagccagagcctaagcc 773
|||||||| || |||||| || |||||||||||||| |||||
Sbjct: 93 aaaccagagccgatgccaaaacccgaaccaaagccagagcccaagcc 139
Score = 48.1 bits (24), Expect = 8e-004
Identities = 84/104 (80%)
Strand = Plus / Plus
Query: 826 cctaagccagagccaaagcctgagccgaaaccgaaaccagatccaaagccagagccacaa 885
|||||||| ||||| || || ||||||| || ||||| || |||||||||||||| ||
Sbjct: 36 cctaagcctgagcccaaaccagagccgatgccaaaacccgaaccaaagccagagcccaaa 95
Query: 886 ccaaagccagagcctaagccagaaccaaaaccagagccaaagcc 929
||| |||| ||| || || |||||||| |||||||| |||||
Sbjct: 96 ccagagccgatgccaaaacccgaaccaaagccagagcccaagcc 139
Score = 48.1 bits (24), Expect = 8e-004
Identities = 54/64 (84%)
Strand = Plus / Plus
Query: 956 agccaaagcctgagcctaaacccgaaccaagaccagaaccagaaccaaagccagagccta 1015
|||| ||||||||||| ||||| || || | ||| |||| ||||||||||||||||| |
Sbjct: 34 agcctaagcctgagcccaaaccagagccgatgccaaaacccgaaccaaagccagagccca 93
Query: 1016 aacc 1019
||||
Sbjct: 94 aacc 97
Score = 46.1 bits (23), Expect = 0.003
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 823 gaacctaagccagagccaaagcctgagccgaaaccgaaaccagatccaaagccagagcc 881
||||| ||||||||||| || || ||||||| || ||||| || ||||||||||||||
Sbjct: 75 gaaccaaagccagagcccaaaccagagccgatgccaaaacccgaaccaaagccagagcc 133
Score = 46.1 bits (23), Expect = 0.003
Identities = 55/66 (83%), Gaps = 6/66 (9%)
Strand = Plus / Plus
Query: 1063 gagcctaagcctgatccaaaaccagagccta------aacccgaaccaaaaccagagccc 1116
|||||||||||||| || ||||||||||| | ||||||||||||| |||||||||
Sbjct: 33 gagcctaagcctgagcccaaaccagagccgatgccaaaacccgaaccaaagccagagccc 92
Query: 1117 caacca 1122
|||||
Sbjct: 93 aaacca 98
Score = 40.1 bits (20), Expect = 0.20
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1093 aaacccgaaccaaaaccagagccc 1116
|||||||||||||| |||||||||
Sbjct: 111 aaacccgaaccaaagccagagccc 134
Score = 40.1 bits (20), Expect = 0.20
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 910 ccaaaaccagagccaaagccagagcctaagcc 941
|||||||| || |||||||||||||| |||||
Sbjct: 108 ccaaaacccgaaccaaagccagagcccaagcc 139
Score = 40.1 bits (20), Expect = 0.20
Identities = 47/56 (83%)
Strand = Plus / Plus
Query: 958 ccaaagcctgagcctaaacccgaaccaagaccagaaccagaaccaaagccagagcc 1013
|||||||| ||||| ||||| || || | ||| |||| |||||||||||||||||
Sbjct: 78 ccaaagccagagcccaaaccagagccgatgccaaaacccgaaccaaagccagagcc 133
>emb|AJ234401.1|HVU234401 Hordeum vulgare partial mRNA; clone cMWG0646
Length = 694
Score = 56.0 bits (28), Expect = 3e-006
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 673 gagcctaagcctgagccgaaaccagaaccaaagccagagccacaaccaaagcctgagcct 732
||||||||||||||||| |||||||| || | |||| | || |||||||||| |||||
Sbjct: 427 gagcctaagcctgagcccaaaccagagccgatgccaaaacccgaaccaaagccagagccc 486
Query: 733 aaaccaga 740
||||||||
Sbjct: 487 aaaccaga 494
Score = 54.0 bits (27), Expect = 1e-005
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 823 gaacctaagccagagccaaagcctgagccgaaaccgaaaccagatccaaagccagagcc 881
||||| ||||||||||| ||||| ||||||| || ||||| || ||||||||||||||
Sbjct: 301 gaaccaaagccagagcctaagcccgagccgatgccaaaacccgaaccaaagccagagcc 359
Score = 54.0 bits (27), Expect = 1e-005
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 910 ccaaaaccagagccaaagccagagcctaagcccga 944
|||||||| || |||||||||||||||||||||||
Sbjct: 292 ccaaaacccgaaccaaagccagagcctaagcccga 326
Score = 54.0 bits (27), Expect = 1e-005
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 742 ccaaaaccagagccaaagccagagcctaagcccga 776
|||||||| || |||||||||||||||||||||||
Sbjct: 292 ccaaaacccgaaccaaagccagagcctaagcccga 326
Score = 52.0 bits (26), Expect = 5e-005
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 495 gccaaaacctgaaccaaaaccagagcctaagccagagc 532
||||||||| |||||||| |||||||||||||| ||||
Sbjct: 291 gccaaaacccgaaccaaagccagagcctaagcccgagc 328
Score = 50.1 bits (25), Expect = 2e-004
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 691 aaaccagaaccaaagccagagccacaaccaaagcctgagcctaaaccagaaccaaaacca 750
||||| ||||||||||||||||| ||||| |||| ||| ||||| |||||||| |||
Sbjct: 463 aaacccgaaccaaagccagagcccaaaccagagccgatgccaaaacccgaaccaaagcca 522
Query: 751 gagcc 755
|||||
Sbjct: 523 gagcc 527
Score = 50.1 bits (25), Expect = 2e-004
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 448 cccgaacctaagccagagcctaagcccga 476
|||||||| ||||||||||||||||||||
Sbjct: 298 cccgaaccaaagccagagcctaagcccga 326
Score = 48.1 bits (24), Expect = 8e-004
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 721 aagcctgagcctaaaccagaaccaaaaccagagccaaagccagagcctaagcccga 776
||||||||||||||||| |||||||| || || ||||||||||| ||||||||
Sbjct: 544 aagcctgagcctaaaccgatgccaaaacccgaaccgaagccagagcccaagcccga 599
Score = 48.1 bits (24), Expect = 8e-004
Identities = 54/64 (84%)
Strand = Plus / Plus
Query: 956 agccaaagcctgagcctaaacccgaaccaagaccagaaccagaaccaaagccagagccta 1015
|||| ||||||||||| ||||| || || | ||| |||| ||||||||||||||||| |
Sbjct: 428 agcctaagcctgagcccaaaccagagccgatgccaaaacccgaaccaaagccagagccca 487
Query: 1016 aacc 1019
||||
Sbjct: 488 aacc 491
Score = 48.1 bits (24), Expect = 8e-004
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 958 ccaaagcctgagcctaaacccgaaccaagaccagaaccagaaccaaagccagagcc 1013
|||||||| |||||||| ||||| || | ||| |||| |||||||||||||||||
Sbjct: 304 ccaaagccagagcctaagcccgagccgatgccaaaacccgaaccaaagccagagcc 359
Score = 48.1 bits (24), Expect = 8e-004
Identities = 56/67 (83%), Gaps = 6/67 (8%)
Strand = Plus / Plus
Query: 884 aaccaaagccagagcctaagccagaacc------aaaaccagagccaaagccagagccta 937
|||||||||||||||||||||| || || |||||| || |||||||||||||| |
Sbjct: 302 aaccaaagccagagcctaagcccgagccgatgccaaaacccgaaccaaagccagagccca 361
Query: 938 agcccga 944
|||||||
Sbjct: 362 agcccga 368
Score = 46.1 bits (23), Expect = 0.003
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 823 gaacctaagccagagccaaagcctgagccgaaaccgaaaccagatccaaagccagagcc 881
||||| ||||||||||| || || ||||||| || ||||| || ||||||||||||||
Sbjct: 469 gaaccaaagccagagcccaaaccagagccgatgccaaaacccgaaccaaagccagagcc 527
Score = 46.1 bits (23), Expect = 0.003
Identities = 65/79 (82%)
Strand = Plus / Plus
Query: 559 aaacccaaaccgaaaccagagccaaagccagagccacaaccaaaaccagagcctaagcca 618
|||||| |||| || |||||||| || |||||||| |||||||| || || ||||||
Sbjct: 463 aaacccgaaccaaagccagagcccaaaccagagccgatgccaaaacccgaaccaaagcca 522
Query: 619 gagcctaaacccgaaccga 637
||||| |||||||| ||||
Sbjct: 523 gagcccaaacccgagccga 541
Score = 46.1 bits (23), Expect = 0.003
Identities = 55/66 (83%), Gaps = 6/66 (9%)
Strand = Plus / Plus
Query: 1063 gagcctaagcctgatccaaaaccagagccta------aacccgaaccaaaaccagagccc 1116
|||||||||||||| || ||||||||||| | ||||||||||||| |||||||||
Sbjct: 427 gagcctaagcctgagcccaaaccagagccgatgccaaaacccgaaccaaagccagagccc 486
Query: 1117 caacca 1122
|||||
Sbjct: 487 aaacca 492
Score = 46.1 bits (23), Expect = 0.003
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 823 gaacctaagccagagccaaagcctgagccgaaaccgaaaccagatccaaagccagagcc 881
||||| ||||||||||| ||||| ||||||| |||||||| || || ||||| |||||
Sbjct: 343 gaaccaaagccagagcccaagcccgagccgatgccgaaacccgaaccgaagcctgagcc 401
Score = 46.1 bits (23), Expect = 0.003
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 742 ccaaaaccagagccaaagccagagcctaagcccga 776
|||||||| || |||||||||||||| ||||||||
Sbjct: 334 ccaaaacccgaaccaaagccagagcccaagcccga 368
Score = 46.1 bits (23), Expect = 0.003
Identities = 49/58 (84%), Gaps = 6/58 (10%)
Strand = Plus / Plus
Query: 662 aacctaagccagagcctaagcctgagccg------aaaccagaaccaaagccagagcc 713
|||| ||||||||||||||||| |||||| ||||| |||||||||||||||||
Sbjct: 302 aaccaaagccagagcctaagcccgagccgatgccaaaacccgaaccaaagccagagcc 359
Score = 46.1 bits (23), Expect = 0.003
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 805 aaacccgaaccaaggccagaacctaagccagagcc 839
||||||||||||| |||||| |||||||| |||||
Sbjct: 295 aaacccgaaccaaagccagagcctaagcccgagcc 329
Score = 46.1 bits (23), Expect = 0.003
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 495 gccaaaacctgaaccaaaaccagagcc 521
|||||||||||||||||| ||||||||
Sbjct: 229 gccaaaacctgaaccaaagccagagcc 255
Score = 46.1 bits (23), Expect = 0.003
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 495 gccaaaacctgaaccaaaaccagagcc 521
|||||||||||||||||| ||||||||
Sbjct: 53 gccaaaacctgaaccaaagccagagcc 79
Score = 44.1 bits (22), Expect = 0.013
Identities = 92/114 (80%), Gaps = 1/114 (0%)
Strand = Plus / Plus
Query: 793 aagcctgagcctaaacccgaaccaaggccagaacctaagccagagccaaagcctgagccg 852
||||||||||||||||| |||| || ||||| ||||||||||| ||||| ||||||
Sbjct: 544 aagcctgagcctaaaccgatgccaaaacccgaaccgaagccagagcccaagcccgagccg 603
Query: 853 aaaccgaaa-ccagatccaaagccagagccacaaccaaagccagagcctaagcc 905
| || ||| || || || ||||||||||| |||||||| |||||||||||
Sbjct: 604 aggccaaaaccctgamcccaagccagagccgatgccaaagccggagcctaagcc 657
Score = 44.1 bits (22), Expect = 0.013
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 958 ccaaagcctgagcctaaacccgaaccaagaccagaaccagaaccaaagccagagcctaaa 1017
|||||||| ||||| ||||| || || | ||| |||| ||||||||||||||||| |||
Sbjct: 472 ccaaagccagagcccaaaccagagccgatgccaaaacccgaaccaaagccagagcccaaa 531
Query: 1018 cc 1019
||
Sbjct: 532 cc 533
Score = 44.1 bits (22), Expect = 0.013
Identities = 79/98 (80%)
Strand = Plus / Plus
Query: 826 cctaagccagagccaaagcctgagccgaaaccgaaaccagatccaaagccagagccacaa 885
|||||||| ||||| || || ||||||| || ||||| || |||||||||||||| ||
Sbjct: 430 cctaagcctgagcccaaaccagagccgatgccaaaacccgaaccaaagccagagcccaaa 489
Query: 886 ccaaagccagagcctaagccagaaccaaaaccagagcc 923
||| |||| ||| || || |||||||| ||||||||
Sbjct: 490 ccagagccgatgccaaaacccgaaccaaagccagagcc 527
Score = 44.1 bits (22), Expect = 0.013
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1052 aaccaaagccagagcctaagcc 1073
||||||||||||||||||||||
Sbjct: 302 aaccaaagccagagcctaagcc 323
Score = 44.1 bits (22), Expect = 0.013
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 535 aaacctgagccaaagccagagcctaaaccc 564
|||||||| |||||||||||||| ||||||
Sbjct: 233 aaacctgaaccaaagccagagcccaaaccc 262
Score = 44.1 bits (22), Expect = 0.013
Identities = 64/78 (82%)
Strand = Plus / Plus
Query: 555 gcctaaacccaaaccgaaaccagagccaaagccagagccacaaccaaaaccagagcctaa 614
||||||||| |||||||||| ||||| || || ||||| |||||||| || || ||
Sbjct: 187 gcctaaaccagaaccgaaacctgagcccaaacctgagcccatgccaaaacctgaaccaaa 246
Query: 615 gccagagcctaaacccga 632
||||||||| ||||||||
Sbjct: 247 gccagagcccaaacccga 264
Score = 44.1 bits (22), Expect = 0.013
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 886 ccaaagccagagcctaagccagaacc 911
|||||||| |||||||||||||||||
Sbjct: 116 ccaaagcccgagcctaagccagaacc 141
Score = 44.1 bits (22), Expect = 0.013
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 535 aaacctgagccaaagccagagcctaaaccc 564
|||||||| |||||||||||||| ||||||
Sbjct: 57 aaacctgaaccaaagccagagcccaaaccc 86
Score = 44.1 bits (22), Expect = 0.013
Identities = 64/78 (82%)
Strand = Plus / Plus
Query: 555 gcctaaacccaaaccgaaaccagagccaaagccagagccacaaccaaaaccagagcctaa 614
||||||||| |||||||||| ||||| || || ||||| |||||||| || || ||
Sbjct: 11 gcctaaaccagaaccgaaacctgagcccaaacctgagcccatgccaaaacctgaaccaaa 70
Query: 615 gccagagcctaaacccga 632
||||||||| ||||||||
Sbjct: 71 gccagagcccaaacccga 88
Score = 42.1 bits (21), Expect = 0.051
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 448 cccgaacctaagccagagcctaagcccga 476
|||||||| ||||||||||| ||||||||
Sbjct: 571 cccgaaccgaagccagagcccaagcccga 599
Score = 42.1 bits (21), Expect = 0.051
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1093 aaacccgaaccaaaaccagagccccaacc 1121
|||||||||||||| ||||||||| ||||
Sbjct: 505 aaacccgaaccaaagccagagcccaaacc 533
Score = 42.1 bits (21), Expect = 0.051
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 448 cccgaacctaagccagagcctaagcccga 476
|||||||| ||||||||||| ||||||||
Sbjct: 340 cccgaaccaaagccagagcccaagcccga 368
Score = 42.1 bits (21), Expect = 0.051
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 992 aaccagaaccaaagccagagcctaa 1016
|||| ||||||||||||||||||||
Sbjct: 296 aacccgaaccaaagccagagcctaa 320
Score = 40.1 bits (20), Expect = 0.20
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 921 gccaaagccagagcctaagcccga 944
||||||||| ||||||||||||||
Sbjct: 637 gccaaagccggagcctaagcccga 660
Score = 40.1 bits (20), Expect = 0.20
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 753 gccaaagccagagcctaagcccga 776
||||||||| ||||||||||||||
Sbjct: 637 gccaaagccggagcctaagcccga 660
Score = 40.1 bits (20), Expect = 0.20
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 772 cccgaaccaaaaccagagccaaagcctgagcc 803
||||||||||| |||||||| ||||| |||||
Sbjct: 340 cccgaaccaaagccagagcccaagcccgagcc 371
Score = 40.1 bits (20), Expect = 0.20
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1093 aaacccgaaccaaaaccagagccc 1116
|||||||||||||| |||||||||
Sbjct: 337 aaacccgaaccaaagccagagccc 360
Score = 40.1 bits (20), Expect = 0.20
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 1148 aaccacagccagaacctaagcccgagcc 1175
||||| ||||||| ||||||||||||||
Sbjct: 302 aaccaaagccagagcctaagcccgagcc 329
Score = 40.1 bits (20), Expect = 0.20
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 596 aaccaaaaccagagcctaagccagagcc 623
||||||| |||||||||||||| |||||
Sbjct: 302 aaccaaagccagagcctaagcccgagcc 329
Score = 40.1 bits (20), Expect = 0.20
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 772 cccgaaccaaaaccagagccaaagcctgagcc 803
||||||||||| |||||||| ||||| |||||
Sbjct: 298 cccgaaccaaagccagagcctaagcccgagcc 329
Score = 40.1 bits (20), Expect = 0.20
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 598 ccaaaaccagagcctaagccagagcctaaacccgaaccga 637
|||||||| || || |||||||||||||| ||||| ||||
Sbjct: 292 ccaaaacccgaaccaaagccagagcctaagcccgagccga 331
Score = 40.1 bits (20), Expect = 0.20
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 992 aaccagaaccaaagccagagcctaaacc 1019
|||| ||||||||||||||||| |||||
Sbjct: 234 aacctgaaccaaagccagagcccaaacc 261
Score = 40.1 bits (20), Expect = 0.20
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 910 ccaaaaccagagccaaagccagagcctaagcccgaaccaa 949
|||||||| || |||||||||||||| || ||||| ||||
Sbjct: 230 ccaaaacctgaaccaaagccagagcccaaacccgagccaa 269
Score = 40.1 bits (20), Expect = 0.20
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 621 gcctaaacccgaaccgaaaccggagccaaagccagagccc 660
||||||||| ||||||||||| ||||| || || ||||||
Sbjct: 187 gcctaaaccagaaccgaaacctgagcccaaacctgagccc 226
Score = 40.1 bits (20), Expect = 0.20
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 445 aagcccgaacctaagccagagcctaagcccga 476
|||||||| ||||||||||| || ||||||||
Sbjct: 119 aagcccgagcctaagccagaacccaagcccga 150
Score = 40.1 bits (20), Expect = 0.20
Identities = 44/52 (84%)
Strand = Plus / Plus
Query: 640 ccggagccaaagccagagccccaacctaagccagagcctaagcctgagccga 691
|||||||| | |||| ||||| | ||||||||||| || ||||| |||||||
Sbjct: 104 ccggagccgatgccaaagcccgagcctaagccagaacccaagcccgagccga 155
Score = 40.1 bits (20), Expect = 0.20
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 992 aaccagaaccaaagccagagcctaaacc 1019
|||| ||||||||||||||||| |||||
Sbjct: 58 aacctgaaccaaagccagagcccaaacc 85
Score = 40.1 bits (20), Expect = 0.20
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 910 ccaaaaccagagccaaagccagagcctaagcccgaaccaa 949
|||||||| || |||||||||||||| || ||||| ||||
Sbjct: 54 ccaaaacctgaaccaaagccagagcccaaacccgagccaa 93
Score = 40.1 bits (20), Expect = 0.20
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 742 ccaaaaccagagccaaagccagagcctaagcccgaaccaa 781
|||||||| || |||||||||||||| || ||||| ||||
Sbjct: 54 ccaaaacctgaaccaaagccagagcccaaacccgagccaa 93
Score = 40.1 bits (20), Expect = 0.20
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 621 gcctaaacccgaaccgaaaccggagccaaagccagagccc 660
||||||||| ||||||||||| ||||| || || ||||||
Sbjct: 11 gcctaaaccagaaccgaaacctgagcccaaacctgagccc 50
>gb|AL499815.1|AL499815 AL499815 Hordeum vulgare Barke etiolated leaves Hordeum vulgare
subsp. vulgare cDNA clone HK03J09r 3', mRNA sequence
Length = 617
Score = 54.0 bits (27), Expect = 1e-005
Identities = 66/79 (83%)
Strand = Plus / Plus
Query: 613 aagccagagcctaaacccgaaccgaaaccggagccaaagccagagccccaacctaagcca 672
||||||||||| || || ||||| || |||||||| | |||| ||||| | |||||||||
Sbjct: 181 aagccagagcccaagccggaacccaagccggagccgatgccaaagcccgagcctaagcca 240
Query: 673 gagcctaagcctgagccga 691
|| || ||||| |||||||
Sbjct: 241 gaacccaagcccgagccga 259
Score = 48.1 bits (24), Expect = 8e-004
Identities = 75/90 (83%), Gaps = 4/90 (4%)
Strand = Plus / Plus
Query: 508 ccaaaaccagagcctaagccagagcataaacctgagccaa---agcca-gagcctaaacc 563
|||||||| || || |||||||||| ||||| ||||||| ||||| |||||||||||
Sbjct: 334 ccaaaacctgaaccaaagccagagcccaaacccgagccaatgaagccaagagcctaaacc 393
Query: 564 caaaccgaaaccagagccaaagccagagcc 593
| |||||||| || ||||||||||||||
Sbjct: 394 gatgccgaaaccggaaccaaagccagagcc 423
Score = 46.1 bits (23), Expect = 0.003
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 687 gccgaaaccagaaccaaagccagagcc 713
||||||||| |||||||||||||||||
Sbjct: 397 gccgaaaccggaaccaaagccagagcc 423
Score = 46.1 bits (23), Expect = 0.003
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 618 agagcctaaacccgaaccgaaaccggagccaaagccagagccc 660
|||||||||||| ||||||||||| |||||||||||||||
Sbjct: 382 agagcctaaaccgatgccgaaaccggaaccaaagccagagccc 424
Score = 46.1 bits (23), Expect = 0.003
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 495 gccaaaacctgaaccaaaaccagagcc 521
|||||||||||||||||| ||||||||
Sbjct: 333 gccaaaacctgaaccaaagccagagcc 359
Score = 44.1 bits (22), Expect = 0.013
Identities = 64/78 (82%)
Strand = Plus / Plus
Query: 555 gcctaaacccaaaccgaaaccagagccaaagccagagccacaaccaaaaccagagcctaa 614
||||||||| |||||||||| ||||| || || ||||| |||||||| || || ||
Sbjct: 291 gcctaaaccagaaccgaaacctgagcccaaacctgagcccatgccaaaacctgaaccaaa 350
Query: 615 gccagagcctaaacccga 632
||||||||| ||||||||
Sbjct: 351 gccagagcccaaacccga 368
Score = 44.1 bits (22), Expect = 0.013
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 886 ccaaagccagagcctaagccagaacc 911
|||||||| |||||||||||||||||
Sbjct: 220 ccaaagcccgagcctaagccagaacc 245
Score = 40.1 bits (20), Expect = 0.20
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 913 aaaccagagccaaagccagagcctaagcccga 944
||||| || |||||||||||||| ||||||||
Sbjct: 401 aaaccggaaccaaagccagagcccaagcccga 432
Score = 40.1 bits (20), Expect = 0.20
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 745 aaaccagagccaaagccagagcctaagcccga 776
||||| || |||||||||||||| ||||||||
Sbjct: 401 aaaccggaaccaaagccagagcccaagcccga 432
Score = 40.1 bits (20), Expect = 0.20
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 992 aaccagaaccaaagccagagcctaaacc 1019
|||| ||||||||||||||||| |||||
Sbjct: 338 aacctgaaccaaagccagagcccaaacc 365
Score = 40.1 bits (20), Expect = 0.20
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 910 ccaaaaccagagccaaagccagagcctaagcccgaaccaa 949
|||||||| || |||||||||||||| || ||||| ||||
Sbjct: 334 ccaaaacctgaaccaaagccagagcccaaacccgagccaa 373
Score = 40.1 bits (20), Expect = 0.20
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 742 ccaaaaccagagccaaagccagagcctaagcccgaaccaa 781
|||||||| || |||||||||||||| || ||||| ||||
Sbjct: 334 ccaaaacctgaaccaaagccagagcccaaacccgagccaa 373
Score = 40.1 bits (20), Expect = 0.20
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 621 gcctaaacccgaaccgaaaccggagccaaagccagagccc 660
||||||||| ||||||||||| ||||| || || ||||||
Sbjct: 291 gcctaaaccagaaccgaaacctgagcccaaacctgagccc 330
Score = 40.1 bits (20), Expect = 0.20
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 445 aagcccgaacctaagccagagcctaagcccga 476
|||||||| ||||||||||| || ||||||||
Sbjct: 223 aagcccgagcctaagccagaacccaagcccga 254
>gb|BI958760.1|BI958760 HVSMEn0016H23f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0016H23f, mRNA sequence
Length = 653
Score = 54.0 bits (27), Expect = 1e-005
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 823 gaacctaagccagagccaaagcctgagccgaaaccgaaaccagatccaaagccagagcc 881
||||| ||||||||||| ||||| ||||||| || ||||| || ||||||||||||||
Sbjct: 559 gaaccaaagccagagcccaagcccgagccgatgccaaaacccgaaccaaagccagagcc 617
Score = 48.1 bits (24), Expect = 8e-004
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 889 aagccagagcctaagccagaaccaaaaccagagccaaagccagagcctaagcccga 944
|||||||||||||| || |||||||| || |||||||||||||| ||||||||
Sbjct: 529 aagccagagcctaaaccgatgccaaaaccggaaccaaagccagagcccaagcccga 584
Score = 48.1 bits (24), Expect = 8e-004
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 721 aagcctgagcctaaaccagaaccaaaaccagagccaaagccagagcctaagcccga 776
||||| ||||||||||| |||||||| || |||||||||||||| ||||||||
Sbjct: 529 aagccagagcctaaaccgatgccaaaaccggaaccaaagccagagcccaagcccga 584
Score = 48.1 bits (24), Expect = 8e-004
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 613 aagccagagcctaaacccgaaccgaaaccggagccaaagccagagccc 660
||||||||||||||||| || |||||||| |||||||||||||||
Sbjct: 529 aagccagagcctaaaccgatgccaaaaccggaaccaaagccagagccc 576
Score = 46.1 bits (23), Expect = 0.003
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 667 aagccagagcctaagcctgagccgaaaccagaaccaaagccagagcc 713
|||||||||||||| || ||| ||||| |||||||||||||||||
Sbjct: 529 aagccagagcctaaaccgatgccaaaaccggaaccaaagccagagcc 575
Score = 46.1 bits (23), Expect = 0.003
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 547 aagccagagcctaaacccaaaccgaaaccagagccaaagccagagcc 593
||||||||||||||||| | || ||||| || ||||||||||||||
Sbjct: 529 aagccagagcctaaaccgatgccaaaaccggaaccaaagccagagcc 575
Score = 42.1 bits (21), Expect = 0.051
Identities = 72/89 (80%)
Strand = Plus / Plus
Query: 925 aagccagagcctaagcccgaaccaaaaccaaagccaaagcctgagcctaaacccgaacca 984
|||||||||||||| || |||||||| | |||||||| ||||| || ||||| ||
Sbjct: 529 aagccagagcctaaaccgatgccaaaaccggaaccaaagccagagcccaagcccgagccg 588
Query: 985 agaccagaaccagaaccaaagccagagcc 1013
| ||| |||| |||||||||||||||||
Sbjct: 589 atgccaaaacccgaaccaaagccagagcc 617
Score = 42.1 bits (21), Expect = 0.051
Identities = 54/65 (83%)
Strand = Plus / Plus
Query: 691 aaaccagaaccaaagccagagccacaaccaaagcctgagcctaaaccagaaccaaaacca 750
||||||||||| || || ||||| |||| ||||| ||||||||||||||| |||||
Sbjct: 418 aaaccagaaccgaaacctgagcccaaacctgagcctatgcctaaaccagaaccgaaacct 477
Query: 751 gagcc 755
|||||
Sbjct: 478 gagcc 482
Score = 42.1 bits (21), Expect = 0.051
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 729 gcctaaaccagaaccaaaaccagagccaaagccagagccta 769
||||||||||||||| ||||| ||||| || || |||||||
Sbjct: 414 gcctaaaccagaaccgaaacctgagcccaaacctgagccta 454
Score = 40.1 bits (20), Expect = 0.20
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1093 aaacccgaaccaaaaccagagccc 1116
|||||||||||||| |||||||||
Sbjct: 595 aaacccgaaccaaagccagagccc 618
Score = 40.1 bits (20), Expect = 0.20
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 781 aaaccagagccaaagcctgagcctaaacccga 812
||||||||||| || |||||||| ||||||||
Sbjct: 490 aaaccagagccgaaacctgagcccaaacccga 521
>gb|BQ134669.1|BQ134669 LP30104 Lemma/palea-enriched cDNA library from dough stage of
kernel Hordeum vulgare subsp. vulgare cDNA clone 3-104
similar to Proline-rich protein, mRNA sequence
Length = 523
Score = 54.0 bits (27), Expect = 1e-005
Identities = 69/83 (83%)
Strand = Plus / Minus
Query: 823 gaacctaagccagagccaaagcctgagccgaaaccgaaaccagatccaaagccagagcca 882
||||| ||||||||||| ||||| ||||||| || ||||| || || |||||||||||
Sbjct: 500 gaaccaaagccagagcccaagcccgagccgatgccaaaacctgaacccaagccagagccg 441
Query: 883 caaccaaagccagagcctaagcc 905
|||||||| |||||||||||
Sbjct: 440 atgccaaagccggagcctaagcc 418
Score = 46.1 bits (23), Expect = 0.003
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 742 ccaaaaccagagccaaagccagagcctaagcccga 776
|||||||| || |||||||||||||| ||||||||
Sbjct: 509 ccaaaacccgaaccaaagccagagcccaagcccga 475
Score = 46.1 bits (23), Expect = 0.003
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 910 ccaaaaccagagccaaagccagagcctaagcccga 944
|||||||| || |||||||||||||| ||||||||
Sbjct: 509 ccaaaacccgaaccaaagccagagcccaagcccga 475
Score = 42.1 bits (21), Expect = 0.051
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 448 cccgaacctaagccagagcctaagcccga 476
|||||||| ||||||||||| ||||||||
Sbjct: 503 cccgaaccaaagccagagcccaagcccga 475
Score = 42.1 bits (21), Expect = 0.051
Identities = 39/45 (86%)
Strand = Plus / Minus
Query: 921 gccaaagccagagcctaagcccgaaccaaaaccaaagccaaagcc 965
||||||||| |||||||||||||| || | ||||||||| ||||
Sbjct: 438 gccaaagccggagcctaagcccgagccgatgccaaagccagagcc 394
Score = 40.1 bits (20), Expect = 0.20
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1093 aaacccgaaccaaaaccagagccc 1116
|||||||||||||| |||||||||
Sbjct: 506 aaacccgaaccaaagccagagccc 483
Score = 40.1 bits (20), Expect = 0.20
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 772 cccgaaccaaaaccagagccaaagcctgagcc 803
||||||||||| |||||||| ||||| |||||
Sbjct: 503 cccgaaccaaagccagagcccaagcccgagcc 472
Score = 40.1 bits (20), Expect = 0.20
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 753 gccaaagccagagcctaagcccga 776
||||||||| ||||||||||||||
Sbjct: 438 gccaaagccggagcctaagcccga 415
>gb|AV925292.1|AV925292 AV925292 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd22j06 5', mRNA sequence
Length = 850
Score = 52.0 bits (26), Expect = 5e-005
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 886 ccaaagccagagcctaagccagaacc 911
||||||||||||||||||||||||||
Sbjct: 301 ccaaagccagagcctaagccagaacc 326
Score = 50.1 bits (25), Expect = 2e-004
Identities = 117/149 (78%), Gaps = 6/149 (4%)
Strand = Plus / Plus
Query: 613 aagccagagcctaaacccgaaccgaaaccggagccaaagccagagccccaacctaagcca 672
||||||||||| || || ||||| || |||||||| | |||| |||| | |||||||||
Sbjct: 262 aagccagagcccaagccggaacccaagccggagccgatgccaaagccagagcctaagcca 321
Query: 673 gagcctaagcctgagccg------aaaccagaaccaaagccagagccacaaccaaagcct 726
|| || | ||| |||||| ||||||||||| || || ||||| |||| |||||
Sbjct: 322 gaacccangcccgagccgatgcctaaaccagaaccgaancctgagcccaaacctgagcct 381
Query: 727 gagcctaaaccagaaccaaaaccagagcc 755
||||||||||||||| ||||| |||||
Sbjct: 382 atgcctaaaccagaaccnaaaccggagcc 410
Score = 46.1 bits (23), Expect = 0.003
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 921 gccaaagccagagcctaagcccgaacc 947
||||||||||||||||||||| |||||
Sbjct: 300 gccaaagccagagcctaagccagaacc 326
Score = 46.1 bits (23), Expect = 0.003
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 753 gccaaagccagagcctaagcccgaacc 779
||||||||||||||||||||| |||||
Sbjct: 300 gccaaagccagagcctaagccagaacc 326
Score = 44.1 bits (22), Expect = 0.013
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 616 ccagagcctaaacccgaaccgaaaccggagccaaagccagagccc 660
|||||||||||||| ||||||||||| ||| |||||||||||
Sbjct: 472 ccagagcctaaaccgatgccgaaaccggaaccanagccagagccc 516
Score = 42.1 bits (21), Expect = 0.051
Identities = 38/44 (86%)
Strand = Plus / Plus
Query: 670 ccagagcctaagcctgagccgaaaccagaaccaaagccagagcc 713
||||||||||| || ||||||||| |||||| ||||||||||
Sbjct: 472 ccagagcctaaaccgatgccgaaaccggaaccanagccagagcc 515
Score = 42.1 bits (21), Expect = 0.051
Identities = 38/44 (86%)
Strand = Plus / Plus
Query: 550 ccagagcctaaacccaaaccgaaaccagagccaaagccagagcc 593
|||||||||||||| | |||||||| || ||| ||||||||||
Sbjct: 472 ccagagcctaaaccgatgccgaaaccggaaccanagccagagcc 515
Score = 42.1 bits (21), Expect = 0.051
Identities = 32/37 (86%)
Strand = Plus / Plus
Query: 535 aaacctgagccaaagccagagcctaaacccaaaccga 571
|||||||| |||||||||||||| || ||| |||||
Sbjct: 430 aaacctganccaaagccagagcccaancccnnaccga 466
Score = 42.1 bits (21), Expect = 0.051
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 621 gcctaaacccgaaccgaaaccggagccaaagccagagccc 660
||||||||| ||||| ||||||||||| || || ||||||
Sbjct: 384 gcctaaaccagaaccnaaaccggagcccaaacctgagccc 423
Score = 42.1 bits (21), Expect = 0.051
Identities = 87/110 (79%)
Strand = Plus / Plus
Query: 814 ccaaggccagaacctaagccagagccaaagcctgagccgaaaccgaaaccagatccaaag 873
|||| |||||| ||||||||||| || | ||| ||||||| || |||||||| || ||
Sbjct: 301 ccaaagccagagcctaagccagaacccangcccgagccgatgcctaaaccagaaccgaan 360
Query: 874 ccagagccacaaccaaagccagagcctaagccagaaccaaaaccagagcc 923
|| ||||| |||| |||| |||||| |||||||| ||||| |||||
Sbjct: 361 cctgagcccaaacctgagcctatgcctaaaccagaaccnaaaccggagcc 410
Score = 40.1 bits (20), Expect = 0.20
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 495 gccaaaacctgaaccaaaaccagagcc 521
|||||||||||| ||||| ||||||||
Sbjct: 426 gccaaaacctganccaaagccagagcc 452
Score = 40.1 bits (20), Expect = 0.20
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1054 ccaaagccagagcctaagcc 1073
||||||||||||||||||||
Sbjct: 301 ccaaagccagagcctaagcc 320
>gb|BJ471998.1|BJ471998 BJ471998 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal31a20 5', mRNA sequence
Length = 473
Score = 52.0 bits (26), Expect = 5e-005
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 958 ccaaagcctgagcctaaacccgaaccaagaccagaaccagaaccaaagccagagcctaaa 1017
|||||||||||||| ||||| || || | ||| |||| ||||||||||||||||| |||
Sbjct: 61 ccaaagcctgagcccaaaccagagccgatgccaaaacccgaaccaaagccagagcccaaa 120
Query: 1018 cc 1019
||
Sbjct: 121 cc 122
Score = 50.1 bits (25), Expect = 2e-004
Identities = 73/89 (82%)
Strand = Plus / Plus
Query: 793 aagcctgagcctaaacccgaaccaaggccagaacctaagccagagccaaagcctgagccg 852
||||||||||||||||| |||| || ||||| ||||||||||| ||||| ||||||
Sbjct: 175 aagcctgagcctaaaccgatgccaaaacccgaaccgaagccagagcccaagcccgagccg 234
Query: 853 aaaccgaaaccagatccaaagccagagcc 881
| || ||||| || || |||||||||||
Sbjct: 235 atgccaaaacctgaacccaagccagagcc 263
Score = 50.1 bits (25), Expect = 2e-004
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 691 aaaccagaaccaaagccagagccacaaccaaagcctgagcctaaaccagaaccaaaacca 750
||||| ||||||||||||||||| ||||| |||| ||| ||||| |||||||| |||
Sbjct: 94 aaacccgaaccaaagccagagcccaaaccagagccgatgccaaaacccgaaccaaagcca 153
Query: 751 gagcc 755
|||||
Sbjct: 154 gagcc 158
Score = 50.1 bits (25), Expect = 2e-004
Identities = 64/77 (83%)
Strand = Plus / Plus
Query: 691 aaaccagaaccaaagccagagccacaaccaaagcctgagcctaaaccagaaccaaaacca 750
||||| ||||||||||| ||||| ||||| |||| ||| ||||| |||||||| |||
Sbjct: 52 aaacctgaaccaaagcctgagcccaaaccagagccgatgccaaaacccgaaccaaagcca 111
Query: 751 gagccaaagccagagcc 767
||||| || ||||||||
Sbjct: 112 gagcccaaaccagagcc 128
Score = 50.1 bits (25), Expect = 2e-004
Identities = 88/109 (80%)
Strand = Plus / Plus
Query: 632 aaccgaaaccggagccaaagccagagccccaacctaagccagagcctaagcctgagccga 691
|||||||||||||||| || || |||||| || || || || || ||||||||||| |
Sbjct: 17 aaccgaaaccggagcccaaacctgagcccatgccaaaacctgaaccaaagcctgagccca 76
Query: 692 aaccagaaccaaagccagagccacaaccaaagcctgagcctaaaccaga 740
||||||| || | |||| | || |||||||||| ||||| ||||||||
Sbjct: 77 aaccagagccgatgccaaaacccgaaccaaagccagagcccaaaccaga 125
Score = 48.1 bits (24), Expect = 8e-004
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 721 aagcctgagcctaaaccagaaccaaaaccagagccaaagccagagcctaagcccga 776
||||||||||||||||| |||||||| || || ||||||||||| ||||||||
Sbjct: 175 aagcctgagcctaaaccgatgccaaaacccgaaccgaagccagagcccaagcccga 230
Score = 46.1 bits (23), Expect = 0.003
Identities = 68/83 (81%)
Strand = Plus / Plus
Query: 823 gaacctaagccagagccaaagcctgagccgaaaccgaaaccagatccaaagccagagcca 882
||||| ||||||||||| || || ||||||| || ||||| || || |||||||||||
Sbjct: 277 gaaccgaagccagagcccaaacccgagccgatgccaaaacctgaacccaagccagagccg 336
Query: 883 caaccaaagccagagcctaagcc 905
|||||||| |||||||||||
Sbjct: 337 atgccaaagccggagcctaagcc 359
Score = 46.1 bits (23), Expect = 0.003
Identities = 65/79 (82%)
Strand = Plus / Plus
Query: 559 aaacccaaaccgaaaccagagccaaagccagagccacaaccaaaaccagagcctaagcca 618
|||||| |||| || |||||||| || |||||||| |||||||| || || ||||||
Sbjct: 94 aaacccgaaccaaagccagagcccaaaccagagccgatgccaaaacccgaaccaaagcca 153
Query: 619 gagcctaaacccgaaccga 637
||||| |||||||| ||||
Sbjct: 154 gagcccaaacccgagccga 172
Score = 46.1 bits (23), Expect = 0.003
Identities = 88/110 (80%), Gaps = 6/110 (5%)
Strand = Plus / Plus
Query: 778 ccaaaaccagagccaaagcctgagcctaaacccgaaccaaggcca------gaacctaag 831
|||||||| || |||||||||||||| ||||| || || | |||| ||||| |||
Sbjct: 49 ccaaaacctgaaccaaagcctgagcccaaaccagagccgatgccaaaacccgaaccaaag 108
Query: 832 ccagagccaaagcctgagccgaaaccgaaaccagatccaaagccagagcc 881
|||||||| || || ||||||| || ||||| || ||||||||||||||
Sbjct: 109 ccagagcccaaaccagagccgatgccaaaacccgaaccaaagccagagcc 158
Score = 44.1 bits (22), Expect = 0.013
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 958 ccaaagcctgagcctaaacccgaaccaagaccagaaccagaaccaaagccagagcctaaa 1017
|||||||| ||||| ||||| || || | ||| |||| ||||||||||||||||| |||
Sbjct: 103 ccaaagccagagcccaaaccagagccgatgccaaaacccgaaccaaagccagagcccaaa 162
Query: 1018 cc 1019
||
Sbjct: 163 cc 164
Score = 44.1 bits (22), Expect = 0.013
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 1093 aaacccgaaccaaaaccagagccccaacca 1122
|||||||||||||| ||||||||| |||||
Sbjct: 94 aaacccgaaccaaagccagagcccaaacca 123
Score = 44.1 bits (22), Expect = 0.013
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 495 gccaaaacctgaaccaaaaccagagcctaagccagagc 532
|||||||||||||||||| || ||||| || |||||||
Sbjct: 48 gccaaaacctgaaccaaagcctgagcccaaaccagagc 85
Score = 42.1 bits (21), Expect = 0.051
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 921 gccaaagccagagcctaagcccgaaccaaaaccaaagccaaagcc 965
||||||||| |||||||||||||| || | ||||||||| ||||
Sbjct: 339 gccaaagccggagcctaagcccgagccgatgccaaagccagagcc 383
Score = 42.1 bits (21), Expect = 0.051
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 448 cccgaacctaagccagagcctaagcccga 476
|||||||| ||||||||||| ||||||||
Sbjct: 202 cccgaaccgaagccagagcccaagcccga 230
Score = 42.1 bits (21), Expect = 0.051
Identities = 54/65 (83%)
Strand = Plus / Plus
Query: 559 aaacccaaaccgaaaccagagccaaagccagagccacaaccaaaaccagagcctaagcca 618
|||||| ||||||| |||||||| ||||| ||||| |||||||| || || ||||||
Sbjct: 199 aaacccgaaccgaagccagagcccaagcccgagccgatgccaaaacctgaacccaagcca 258
Query: 619 gagcc 623
|||||
Sbjct: 259 gagcc 263
Score = 42.1 bits (21), Expect = 0.051
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1093 aaacccgaaccaaaaccagagccccaacc 1121
|||||||||||||| ||||||||| ||||
Sbjct: 136 aaacccgaaccaaagccagagcccaaacc 164
Score = 42.1 bits (21), Expect = 0.051
Identities = 81/101 (80%)
Strand = Plus / Plus
Query: 823 gaacctaagccagagccaaagcctgagccgaaaccgaaaccagatccaaagccagagcca 882
||||| ||||| ||||| || || ||||||| || ||||| || ||||||||||||||
Sbjct: 58 gaaccaaagcctgagcccaaaccagagccgatgccaaaacccgaaccaaagccagagccc 117
Query: 883 caaccaaagccagagcctaagccagaaccaaaaccagagcc 923
||||| |||| ||| || || |||||||| ||||||||
Sbjct: 118 aaaccagagccgatgccaaaacccgaaccaaagccagagcc 158
Score = 40.1 bits (20), Expect = 0.20
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 753 gccaaagccagagcctaagcccga 776
||||||||| ||||||||||||||
Sbjct: 339 gccaaagccggagcctaagcccga 362
Score = 40.1 bits (20), Expect = 0.20
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 598 ccaaaaccagagcctaagccagagcctaaacccgaaccga 637
|||||||| || || ||||||||||| |||||||| ||||
Sbjct: 268 ccaaaacccgaaccgaagccagagcccaaacccgagccga 307
>gb|BE601897.1|BE601897 HVSMEh0099O21f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0099O21f, mRNA sequence
Length = 566
Score = 50.1 bits (25), Expect = 2e-004
Identities = 91/113 (80%)
Strand = Plus / Plus
Query: 793 aagcctgagcctaaacccgaaccaaggccagaacctaagccagagccaaagcctgagccg 852
||||||||||||||||| |||| || ||||| ||||| ||||| ||||| ||||||
Sbjct: 62 aagcctgagcctaaaccgatgccaaaacccgaaccaaagccggagcccaagcccgagccg 121
Query: 853 aaaccgaaaccagatccaaagccagagccacaaccaaagccagagcctaagcc 905
| || ||||| || || ||||||||||| |||||||| |||||||||||
Sbjct: 122 atgccaaaacctgaacccaagccagagccgatgccaaagccggagcctaagcc 174
Score = 48.1 bits (24), Expect = 8e-004
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 721 aagcctgagcctaaaccagaaccaaaaccagagccaaagccagagcctaagcccga 776
||||||||||||||||| |||||||| || |||||||| ||||| ||||||||
Sbjct: 62 aagcctgagcctaaaccgatgccaaaacccgaaccaaagccggagcccaagcccga 117
Score = 42.1 bits (21), Expect = 0.051
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 921 gccaaagccagagcctaagcccgaaccaaaaccaaagccaaagcc 965
||||||||| |||||||||||||| || | ||||||||| ||||
Sbjct: 154 gccaaagccggagcctaagcccgagccgatgccaaagccagagcc 198
Score = 40.1 bits (20), Expect = 0.20
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 753 gccaaagccagagcctaagcccga 776
||||||||| ||||||||||||||
Sbjct: 154 gccaaagccggagcctaagcccga 177
>gb|AV912005.1|AV912005 AV912005 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak2g09 3', mRNA sequence
Length = 576
Score = 50.1 bits (25), Expect = 2e-004
Identities = 73/89 (82%)
Strand = Plus / Minus
Query: 793 aagcctgagcctaaacccgaaccaaggccagaacctaagccagagccaaagcctgagccg 852
||||||||||||||||| |||| || ||||| ||||||||||| ||||| ||||||
Sbjct: 533 aagcctgagcctaaaccgatgccaaaacccgaaccgaagccagagcccaagcccgagccg 474
Query: 853 aaaccgaaaccagatccaaagccagagcc 881
| || ||||| || || |||||||||||
Sbjct: 473 atgccaaaacctgaacccaagccagagcc 445
Score = 48.1 bits (24), Expect = 8e-004
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 721 aagcctgagcctaaaccagaaccaaaaccagagccaaagccagagcctaagcccga 776
||||||||||||||||| |||||||| || || ||||||||||| ||||||||
Sbjct: 533 aagcctgagcctaaaccgatgccaaaacccgaaccgaagccagagcccaagcccga 478
Score = 46.1 bits (23), Expect = 0.003
Identities = 68/83 (81%)
Strand = Plus / Minus
Query: 823 gaacctaagccagagccaaagcctgagccgaaaccgaaaccagatccaaagccagagcca 882
||||| ||||||||||| ||||| ||||||| || ||||| || || ||||| |||||
Sbjct: 431 gaaccgaagccagagcccaagcccgagccgatgccaaaacctgaacccaagcccgagccg 372
Query: 883 caaccaaagccagagcctaagcc 905
|||||||||||||| |||||
Sbjct: 371 atgccaaagccagagcccaagcc 349
Score = 42.1 bits (21), Expect = 0.051
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 1093 aaacccgaaccaaaaccagagccccaacc 1121
|||||||||||||| ||||||||| ||||
Sbjct: 572 aaacccgaaccaaagccagagcccaaacc 544
Score = 42.1 bits (21), Expect = 0.051
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 448 cccgaacctaagccagagcctaagcccga 476
|||||||| ||||||||||| ||||||||
Sbjct: 506 cccgaaccgaagccagagcccaagcccga 478
Score = 42.1 bits (21), Expect = 0.051
Identities = 54/65 (83%)
Strand = Plus / Minus
Query: 559 aaacccaaaccgaaaccagagccaaagccagagccacaaccaaaaccagagcctaagcca 618
|||||| ||||||| |||||||| ||||| ||||| |||||||| || || ||||||
Sbjct: 509 aaacccgaaccgaagccagagcccaagcccgagccgatgccaaaacctgaacccaagcca 450
Query: 619 gagcc 623
|||||
Sbjct: 449 gagcc 445
Score = 42.1 bits (21), Expect = 0.051
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 448 cccgaacctaagccagagcctaagcccga 476
|||||||| ||||||||||| ||||||||
Sbjct: 434 cccgaaccgaagccagagcccaagcccga 406
Score = 40.1 bits (20), Expect = 0.20
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 992 aaccagaaccaaagccagagcctaaacc 1019
|||| ||||||||||||||||| |||||
Sbjct: 571 aacccgaaccaaagccagagcccaaacc 544
Score = 40.1 bits (20), Expect = 0.20
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 598 ccaaaaccagagcctaagccagagcctaaacccgaaccga 637
|||||||| || || ||||||||||| |||||||| ||||
Sbjct: 575 ccaaaacccgaaccaaagccagagcccaaacccgagccga 536
>gb|AV919628.1|AV919628 AV919628 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags6o12 3', mRNA sequence
Length = 769
Score = 50.1 bits (25), Expect = 2e-004
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 691 aaaccagaaccaaagccagagccacaaccaaagcctgagcctaaaccagaaccaaaacca 750
||||| ||||||||||||||||| ||||| |||| ||| ||||| |||||||| |||
Sbjct: 627 aaacccgaaccaaagccagagcccaaaccagagccgatgccaaaacccgaaccaaagcca 568
Query: 751 gagcc 755
|||||
Sbjct: 567 gagcc 563
Score = 46.1 bits (23), Expect = 0.003
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 823 gaacctaagccagagccaaagcctgagccgaaaccgaaaccagatccaaagccagagcc 881
||||| ||||||||||| || || ||||||| || ||||| || ||||||||||||||
Sbjct: 621 gaaccaaagccagagcccaaaccagagccgatgccaaaacccgaaccaaagccagagcc 563
Score = 46.1 bits (23), Expect = 0.003
Identities = 65/79 (82%)
Strand = Plus / Minus
Query: 559 aaacccaaaccgaaaccagagccaaagccagagccacaaccaaaaccagagcctaagcca 618
|||||| |||| || |||||||| || |||||||| |||||||| || || ||||||
Sbjct: 627 aaacccgaaccaaagccagagcccaaaccagagccgatgccaaaacccgaaccaaagcca 568
Query: 619 gagcctaaacccgaaccga 637
||||| |||||||| ||||
Sbjct: 567 gagcccaaacccgagccga 549
Score = 46.1 bits (23), Expect = 0.003
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 823 gaacctaagccagagccaaagcctgagccgaaaccgaaaccagatccaaagccagagcc 881
||||| ||||||||||| ||||| ||||||| || ||||| || || |||||||||||
Sbjct: 516 gaaccgaagccagagcccaagcccgagccgatgccaaaacctgaacccaagccagagcc 458
Score = 46.1 bits (23), Expect = 0.003
Identities = 68/83 (81%)
Strand = Plus / Minus
Query: 823 gaacctaagccagagccaaagcctgagccgaaaccgaaaccagatccaaagccagagcca 882
||||| ||||||||||| || || ||||||| || ||||| || || |||||||||||
Sbjct: 444 gaaccgaagccagagcccaaacccgagccgatgccaaaacctgaacccaagccagagccg 385
Query: 883 caaccaaagccagagcctaagcc 905
|||||||| |||||||||||
Sbjct: 384 atgccaaagccggagcctaagcc 362
Score = 44.1 bits (22), Expect = 0.013
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 1093 aaacccgaaccaaaaccagagccccaacca 1122
|||||||||||||| ||||||||| |||||
Sbjct: 627 aaacccgaaccaaagccagagcccaaacca 598
Score = 44.1 bits (22), Expect = 0.013
Identities = 52/62 (83%)
Strand = Plus / Minus
Query: 958 ccaaagcctgagcctaaacccgaaccaagaccagaaccagaaccaaagccagagcctaaa 1017
|||||||| ||||| ||||| || || | ||| |||| ||||||||||||||||| |||
Sbjct: 618 ccaaagccagagcccaaaccagagccgatgccaaaacccgaaccaaagccagagcccaaa 559
Query: 1018 cc 1019
||
Sbjct: 558 cc 557
Score = 42.1 bits (21), Expect = 0.051
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 1093 aaacccgaaccaaaaccagagccccaacc 1121
|||||||||||||| ||||||||| ||||
Sbjct: 585 aaacccgaaccaaagccagagcccaaacc 557
Score = 42.1 bits (21), Expect = 0.051
Identities = 47/56 (83%)
Strand = Plus / Minus
Query: 721 aagcctgagcctaaaccagaaccaaaaccagagccaaagccagagcctaagcccga 776
|||| |||||||||||| |||||||| || || ||||||||||| ||||||||
Sbjct: 546 aagcntgagcctaaaccgatgccaaaacccgaaccgaagccagagcccaagcccga 491
Score = 42.1 bits (21), Expect = 0.051
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 448 cccgaacctaagccagagcctaagcccga 476
|||||||| ||||||||||| ||||||||
Sbjct: 519 cccgaaccgaagccagagcccaagcccga 491
Score = 42.1 bits (21), Expect = 0.051
Identities = 54/65 (83%)
Strand = Plus / Minus
Query: 559 aaacccaaaccgaaaccagagccaaagccagagccacaaccaaaaccagagcctaagcca 618
|||||| ||||||| |||||||| ||||| ||||| |||||||| || || ||||||
Sbjct: 522 aaacccgaaccgaagccagagcccaagcccgagccgatgccaaaacctgaacccaagcca 463
Query: 619 gagcc 623
|||||
Sbjct: 462 gagcc 458
Score = 42.1 bits (21), Expect = 0.051
Identities = 39/45 (86%)
Strand = Plus / Minus
Query: 921 gccaaagccagagcctaagcccgaaccaaaaccaaagccaaagcc 965
||||||||| |||||||||||||| || | ||||||||| ||||
Sbjct: 382 gccaaagccggagcctaagcccgagccgatgccaaagccagagcc 338
Score = 40.1 bits (20), Expect = 0.20
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 992 aaccagaaccaaagccagagcctaaacc 1019
|||| ||||||||||||||||| |||||
Sbjct: 626 aacccgaaccaaagccagagcccaaacc 599
Score = 40.1 bits (20), Expect = 0.20
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 598 ccaaaaccagagcctaagccagagcctaaacccgaaccga 637
|||||||| || || ||||||||||| |||||||| ||||
Sbjct: 453 ccaaaacccgaaccgaagccagagcccaaacccgagccga 414
Score = 40.1 bits (20), Expect = 0.20
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 753 gccaaagccagagcctaagcccga 776
||||||||| ||||||||||||||
Sbjct: 382 gccaaagccggagcctaagcccga 359
>gb|BJ449584.1|BJ449584 BJ449584 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak25m06 5', mRNA sequence
Length = 311
Score = 50.1 bits (25), Expect = 2e-004
Identities = 73/89 (82%)
Strand = Plus / Plus
Query: 793 aagcctgagcctaaacccgaaccaaggccagaacctaagccagagccaaagcctgagccg 852
||||||||||||||||| |||| || ||||| ||||||||||| ||||| ||||||
Sbjct: 61 aagcctgagcctaaaccgatgccaaaacccgaaccgaagccagagcccaagcccgagccg 120
Query: 853 aaaccgaaaccagatccaaagccagagcc 881
| || ||||| || || |||||||||||
Sbjct: 121 atgccaaaacctgaacccaagccagagcc 149
Score = 48.1 bits (24), Expect = 8e-004
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 721 aagcctgagcctaaaccagaaccaaaaccagagccaaagccagagcctaagcccga 776
||||||||||||||||| |||||||| || || ||||||||||| ||||||||
Sbjct: 61 aagcctgagcctaaaccgatgccaaaacccgaaccgaagccagagcccaagcccga 116
Score = 46.1 bits (23), Expect = 0.003
Identities = 68/83 (81%)
Strand = Plus / Plus
Query: 823 gaacctaagccagagccaaagcctgagccgaaaccgaaaccagatccaaagccagagcca 882
||||| ||||||||||| ||||| ||||||| || ||||| || || ||||| |||||
Sbjct: 163 gaaccgaagccagagcccaagcccgagccgatgccaaaacctgaacccaagcccgagccg 222
Query: 883 caaccaaagccagagcctaagcc 905
|||||||||||||| |||||
Sbjct: 223 atgccaaagccagagcccaagcc 245
Score = 42.1 bits (21), Expect = 0.051
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 448 cccgaacctaagccagagcctaagcccga 476
|||||||| ||||||||||| ||||||||
Sbjct: 160 cccgaaccgaagccagagcccaagcccga 188
Score = 42.1 bits (21), Expect = 0.051
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 448 cccgaacctaagccagagcctaagcccga 476
|||||||| ||||||||||| ||||||||
Sbjct: 88 cccgaaccgaagccagagcccaagcccga 116
Score = 42.1 bits (21), Expect = 0.051
Identities = 54/65 (83%)
Strand = Plus / Plus
Query: 559 aaacccaaaccgaaaccagagccaaagccagagccacaaccaaaaccagagcctaagcca 618
|||||| ||||||| |||||||| ||||| ||||| |||||||| || || ||||||
Sbjct: 85 aaacccgaaccgaagccagagcccaagcccgagccgatgccaaaacctgaacccaagcca 144
Query: 619 gagcc 623
|||||
Sbjct: 145 gagcc 149
Score = 42.1 bits (21), Expect = 0.051
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1093 aaacccgaaccaaaaccagagccccaacc 1121
|||||||||||||| ||||||||| ||||
Sbjct: 22 aaacccgaaccaaagccagagcccaaacc 50
Score = 40.1 bits (20), Expect = 0.20
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 992 aaccagaaccaaagccagagcctaaacc 1019
|||| ||||||||||||||||| |||||
Sbjct: 23 aacccgaaccaaagccagagcccaaacc 50
Score = 40.1 bits (20), Expect = 0.20
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 598 ccaaaaccagagcctaagccagagcctaaacccgaaccga 637
|||||||| || || ||||||||||| |||||||| ||||
Sbjct: 19 ccaaaacccgaaccaaagccagagcccaaacccgagccga 58
>gb|BJ451190.1|BJ451190 BJ451190 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak33b03 5', mRNA sequence
Length = 595
Score = 50.1 bits (25), Expect = 2e-004
Identities = 73/89 (82%)
Strand = Plus / Plus
Query: 793 aagcctgagcctaaacccgaaccaaggccagaacctaagccagagccaaagcctgagccg 852
||||||||||||||||| |||| || ||||| ||||||||||| ||||| ||||||
Sbjct: 46 aagcctgagcctaaaccgatgccaaaacccgaaccgaagccagagcccaagcccgagccg 105
Query: 853 aaaccgaaaccagatccaaagccagagcc 881
| || ||||| || || |||||||||||
Sbjct: 106 atgccaaaacctgaacccaagccagagcc 134
Score = 48.1 bits (24), Expect = 8e-004
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 721 aagcctgagcctaaaccagaaccaaaaccagagccaaagccagagcctaagcccga 776
||||||||||||||||| |||||||| || || ||||||||||| ||||||||
Sbjct: 46 aagcctgagcctaaaccgatgccaaaacccgaaccgaagccagagcccaagcccga 101
Score = 46.1 bits (23), Expect = 0.003
Identities = 68/83 (81%)
Strand = Plus / Plus
Query: 823 gaacctaagccagagccaaagcctgagccgaaaccgaaaccagatccaaagccagagcca 882
||||| ||||||||||| ||||| ||||||| || ||||| || || ||||| |||||
Sbjct: 148 gaaccgaagccagagcccaagcccgagccgatgccaaaacctgaacccaagcccgagccg 207
Query: 883 caaccaaagccagagcctaagcc 905
|||||||||||||| |||||
Sbjct: 208 atgccaaagccagagcccaagcc 230
Score = 42.1 bits (21), Expect = 0.051
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 448 cccgaacctaagccagagcctaagcccga 476
|||||||| ||||||||||| ||||||||
Sbjct: 145 cccgaaccgaagccagagcccaagcccga 173
Score = 42.1 bits (21), Expect = 0.051
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 448 cccgaacctaagccagagcctaagcccga 476
|||||||| ||||||||||| ||||||||
Sbjct: 73 cccgaaccgaagccagagcccaagcccga 101
Score = 42.1 bits (21), Expect = 0.051
Identities = 54/65 (83%)
Strand = Plus / Plus
Query: 559 aaacccaaaccgaaaccagagccaaagccagagccacaaccaaaaccagagcctaagcca 618
|||||| ||||||| |||||||| ||||| ||||| |||||||| || || ||||||
Sbjct: 70 aaacccgaaccgaagccagagcccaagcccgagccgatgccaaaacctgaacccaagcca 129
Query: 619 gagcc 623
|||||
Sbjct: 130 gagcc 134
>gb|BJ457011.1|BJ457011 BJ457011 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak25m06 3', mRNA sequence
Length = 682
Score = 50.1 bits (25), Expect = 2e-004
Identities = 73/89 (82%)
Strand = Plus / Minus
Query: 793 aagcctgagcctaaacccgaaccaaggccagaacctaagccagagccaaagcctgagccg 852
||||||||||||||||| |||| || ||||| ||||||||||| ||||| ||||||
Sbjct: 610 aagcctgagcctaaaccgatgccaaaacccgaaccgaagccagagcccaagcccgagccg 551
Query: 853 aaaccgaaaccagatccaaagccagagcc 881
| || ||||| || || |||||||||||
Sbjct: 550 atgccaaaacctgaacccaagccagagcc 522
Score = 48.1 bits (24), Expect = 8e-004
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 721 aagcctgagcctaaaccagaaccaaaaccagagccaaagccagagcctaagcccga 776
||||||||||||||||| |||||||| || || ||||||||||| ||||||||
Sbjct: 610 aagcctgagcctaaaccgatgccaaaacccgaaccgaagccagagcccaagcccga 555
Score = 46.1 bits (23), Expect = 0.003
Identities = 68/83 (81%)
Strand = Plus / Minus
Query: 823 gaacctaagccagagccaaagcctgagccgaaaccgaaaccagatccaaagccagagcca 882
||||| ||||||||||| ||||| ||||||| || ||||| || || ||||| |||||
Sbjct: 508 gaaccgaagccagagcccaagcccgagccgatgccaaaacctgaacccaagcccgagccg 449
Query: 883 caaccaaagccagagcctaagcc 905
|||||||||||||| |||||
Sbjct: 448 atgccaaagccagagcccaagcc 426
Score = 44.1 bits (22), Expect = 0.013
Identities = 52/62 (83%)
Strand = Plus / Minus
Query: 958 ccaaagcctgagcctaaacccgaaccaagaccagaaccagaaccaaagccagagcctaaa 1017
|||||||| ||||| ||||| || || | ||| |||| ||||||||||||||||| |||
Sbjct: 682 ccaaagccagagcccaaaccagagccgatgccaaaacccgaaccaaagccagagcccaaa 623
Query: 1018 cc 1019
||
Sbjct: 622 cc 621
Score = 42.1 bits (21), Expect = 0.051
Identities = 45/53 (84%)
Strand = Plus / Minus
Query: 829 aagccagagccaaagcctgagccgaaaccgaaaccagatccaaagccagagcc 881
||||||||||| || || ||||||| || ||||| || ||||||||||||||
Sbjct: 679 aagccagagcccaaaccagagccgatgccaaaacccgaaccaaagccagagcc 627
Score = 42.1 bits (21), Expect = 0.051
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 1093 aaacccgaaccaaaaccagagccccaacc 1121
|||||||||||||| ||||||||| ||||
Sbjct: 649 aaacccgaaccaaagccagagcccaaacc 621
Score = 42.1 bits (21), Expect = 0.051
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 448 cccgaacctaagccagagcctaagcccga 476
|||||||| ||||||||||| ||||||||
Sbjct: 583 cccgaaccgaagccagagcccaagcccga 555
Score = 42.1 bits (21), Expect = 0.051
Identities = 54/65 (83%)
Strand = Plus / Minus
Query: 559 aaacccaaaccgaaaccagagccaaagccagagccacaaccaaaaccagagcctaagcca 618
|||||| ||||||| |||||||| ||||| ||||| |||||||| || || ||||||
Sbjct: 586 aaacccgaaccgaagccagagcccaagcccgagccgatgccaaaacctgaacccaagcca 527
Query: 619 gagcc 623
|||||
Sbjct: 526 gagcc 522
Score = 42.1 bits (21), Expect = 0.051
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 448 cccgaacctaagccagagcctaagcccga 476
|||||||| ||||||||||| ||||||||
Sbjct: 511 cccgaaccgaagccagagcccaagcccga 483
Score = 40.1 bits (20), Expect = 0.20
Identities = 47/56 (83%)
Strand = Plus / Minus
Query: 700 ccaaagccagagccacaaccaaagcctgagcctaaaccagaaccaaaaccagagcc 755
|||||||||||||| ||||| |||| ||| ||||| |||||||| ||||||||
Sbjct: 682 ccaaagccagagcccaaaccagagccgatgccaaaacccgaaccaaagccagagcc 627
Score = 40.1 bits (20), Expect = 0.20
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 598 ccaaaaccagagcctaagccagagcctaaacccgaaccga 637
|||||||| || || ||||||||||| |||||||| ||||
Sbjct: 652 ccaaaacccgaaccaaagccagagcccaaacccgagccga 613
>gb|BJ458690.1|BJ458690 BJ458690 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak33b03 3', mRNA sequence
Length = 587
Score = 50.1 bits (25), Expect = 2e-004
Identities = 73/89 (82%)
Strand = Plus / Minus
Query: 793 aagcctgagcctaaacccgaaccaaggccagaacctaagccagagccaaagcctgagccg 852
||||||||||||||||| |||| || ||||| ||||||||||| ||||| ||||||
Sbjct: 544 aagcctgagcctaaaccgatgccaaaacccgaaccgaagccagagcccaagcccgagccg 485
Query: 853 aaaccgaaaccagatccaaagccagagcc 881
| || ||||| || || |||||||||||
Sbjct: 484 atgccaaaacctgaacccaagccagagcc 456
Score = 48.1 bits (24), Expect = 8e-004
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 721 aagcctgagcctaaaccagaaccaaaaccagagccaaagccagagcctaagcccga 776
||||||||||||||||| |||||||| || || ||||||||||| ||||||||
Sbjct: 544 aagcctgagcctaaaccgatgccaaaacccgaaccgaagccagagcccaagcccga 489
Score = 46.1 bits (23), Expect = 0.003
Identities = 68/83 (81%)
Strand = Plus / Minus
Query: 823 gaacctaagccagagccaaagcctgagccgaaaccgaaaccagatccaaagccagagcca 882
||||| ||||||||||| ||||| ||||||| || ||||| || || ||||| |||||
Sbjct: 442 gaaccgaagccagagcccaagcccgagccgatgccaaaacctgaacccaagcccgagccg 383
Query: 883 caaccaaagccagagcctaagcc 905
|||||||||||||| |||||
Sbjct: 382 atgccaaagccagagcccaagcc 360
Score = 42.1 bits (21), Expect = 0.051
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 1093 aaacccgaaccaaaaccagagccccaacc 1121
|||||||||||||| ||||||||| ||||
Sbjct: 583 aaacccgaaccaaagccagagcccaaacc 555
Score = 42.1 bits (21), Expect = 0.051
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 448 cccgaacctaagccagagcctaagcccga 476
|||||||| ||||||||||| ||||||||
Sbjct: 517 cccgaaccgaagccagagcccaagcccga 489
Score = 42.1 bits (21), Expect = 0.051
Identities = 54/65 (83%)
Strand = Plus / Minus
Query: 559 aaacccaaaccgaaaccagagccaaagccagagccacaaccaaaaccagagcctaagcca 618
|||||| ||||||| |||||||| ||||| ||||| |||||||| || || ||||||
Sbjct: 520 aaacccgaaccgaagccagagcccaagcccgagccgatgccaaaacctgaacccaagcca 461
Query: 619 gagcc 623
|||||
Sbjct: 460 gagcc 456
Score = 42.1 bits (21), Expect = 0.051
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 448 cccgaacctaagccagagcctaagcccga 476
|||||||| ||||||||||| ||||||||
Sbjct: 445 cccgaaccgaagccagagcccaagcccga 417
Score = 40.1 bits (20), Expect = 0.20
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 992 aaccagaaccaaagccagagcctaaacc 1019
|||| ||||||||||||||||| |||||
Sbjct: 582 aacccgaaccaaagccagagcccaaacc 555
Score = 40.1 bits (20), Expect = 0.20
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 598 ccaaaaccagagcctaagccagagcctaaacccgaaccga 637
|||||||| || || ||||||||||| |||||||| ||||
Sbjct: 586 ccaaaacccgaaccaaagccagagcccaaacccgagccga 547
>gb|BJ463208.1|BJ463208 BJ463208 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags26d23 5', mRNA sequence
Length = 593
Score = 50.1 bits (25), Expect = 2e-004
Identities = 73/89 (82%)
Strand = Plus / Plus
Query: 793 aagcctgagcctaaacccgaaccaaggccagaacctaagccagagccaaagcctgagccg 852
||||||||||||||||| |||| || ||||| ||||||||||| ||||| ||||||
Sbjct: 61 aagcctgagcctaaaccgatgccaaaacccgaaccgaagccagagcccaagcccgagccg 120
Query: 853 aaaccgaaaccagatccaaagccagagcc 881
| || ||||| || || |||||||||||
Sbjct: 121 atgccaaaacctgaacccaagccagagcc 149
Score = 48.1 bits (24), Expect = 8e-004
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 721 aagcctgagcctaaaccagaaccaaaaccagagccaaagccagagcctaagcccga 776
||||||||||||||||| |||||||| || || ||||||||||| ||||||||
Sbjct: 61 aagcctgagcctaaaccgatgccaaaacccgaaccgaagccagagcccaagcccga 116
Score = 46.1 bits (23), Expect = 0.003
Identities = 68/83 (81%)
Strand = Plus / Plus
Query: 823 gaacctaagccagagccaaagcctgagccgaaaccgaaaccagatccaaagccagagcca 882
||||| ||||||||||| || || ||||||| || ||||| || || |||||||||||
Sbjct: 163 gaaccgaagccagagcccaaacccgagccgatgccaaaacctgaacccaagccagagccg 222
Query: 883 caaccaaagccagagcctaagcc 905
|||||||| |||||||||||
Sbjct: 223 atgccaaagccggagcctaagcc 245
Score = 42.1 bits (21), Expect = 0.051
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 921 gccaaagccagagcctaagcccgaaccaaaaccaaagccaaagcc 965
||||||||| |||||||||||||| || | ||||||||| ||||
Sbjct: 225 gccaaagccggagcctaagcccgagccgatgccaaagccagagcc 269
Score = 42.1 bits (21), Expect = 0.051
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 448 cccgaacctaagccagagcctaagcccga 476
|||||||| ||||||||||| ||||||||
Sbjct: 88 cccgaaccgaagccagagcccaagcccga 116
Score = 42.1 bits (21), Expect = 0.051
Identities = 54/65 (83%)
Strand = Plus / Plus
Query: 559 aaacccaaaccgaaaccagagccaaagccagagccacaaccaaaaccagagcctaagcca 618
|||||| ||||||| |||||||| ||||| ||||| |||||||| || || ||||||
Sbjct: 85 aaacccgaaccgaagccagagcccaagcccgagccgatgccaaaacctgaacccaagcca 144
Query: 619 gagcc 623
|||||
Sbjct: 145 gagcc 149
Score = 42.1 bits (21), Expect = 0.051
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1093 aaacccgaaccaaaaccagagccccaacc 1121
|||||||||||||| ||||||||| ||||
Sbjct: 22 aaacccgaaccaaagccagagcccaaacc 50
Score = 40.1 bits (20), Expect = 0.20
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 753 gccaaagccagagcctaagcccga 776
||||||||| ||||||||||||||
Sbjct: 225 gccaaagccggagcctaagcccga 248
Score = 40.1 bits (20), Expect = 0.20
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 598 ccaaaaccagagcctaagccagagcctaaacccgaaccga 637
|||||||| || || ||||||||||| |||||||| ||||
Sbjct: 154 ccaaaacccgaaccgaagccagagcccaaacccgagccga 193
Score = 40.1 bits (20), Expect = 0.20
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 992 aaccagaaccaaagccagagcctaaacc 1019
|||| ||||||||||||||||| |||||
Sbjct: 23 aacccgaaccaaagccagagcccaaacc 50
Score = 40.1 bits (20), Expect = 0.20
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 598 ccaaaaccagagcctaagccagagcctaaacccgaaccga 637
|||||||| || || ||||||||||| |||||||| ||||
Sbjct: 19 ccaaaacccgaaccaaagccagagcccaaacccgagccga 58
>gb|BJ463209.1|BJ463209 BJ463209 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags26d24 5', mRNA sequence
Length = 378
Score = 50.1 bits (25), Expect = 2e-004
Identities = 73/89 (82%)
Strand = Plus / Plus
Query: 793 aagcctgagcctaaacccgaaccaaggccagaacctaagccagagccaaagcctgagccg 852
||||||||||||||||| |||| || ||||| ||||||||||| ||||| ||||||
Sbjct: 103 aagcctgagcctaaaccgatgccaaaacccgaaccgaagccagagcccaagcccgagccg 162
Query: 853 aaaccgaaaccagatccaaagccagagcc 881
| || ||||| || || |||||||||||
Sbjct: 163 atgccaaaacctgaacccaagccagagcc 191
Score = 48.1 bits (24), Expect = 8e-004
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 721 aagcctgagcctaaaccagaaccaaaaccagagccaaagccagagcctaagcccga 776
||||||||||||||||| |||||||| || || ||||||||||| ||||||||
Sbjct: 103 aagcctgagcctaaaccgatgccaaaacccgaaccgaagccagagcccaagcccga 158
Score = 42.1 bits (21), Expect = 0.051
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 921 gccaaagccagagcctaagcccgaaccaaaaccaaagccaaagcc 965
||||||||| |||||||||||||| || | ||||||||| ||||
Sbjct: 267 gccaaagccggagcctaagcccgagccgatgccaaagccagagcc 311
Score = 42.1 bits (21), Expect = 0.051
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 598 ccaaaaccagagcctaagccagagcctaaacccgaaccga 637
|||||||| || || ||||||||||| |||||||| ||||
Sbjct: 196 ccaaaaccngaaccgaagccagagcccaaacccgagccga 235
Score = 42.1 bits (21), Expect = 0.051
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 448 cccgaacctaagccagagcctaagcccga 476
|||||||| ||||||||||| ||||||||
Sbjct: 130 cccgaaccgaagccagagcccaagcccga 158
Score = 42.1 bits (21), Expect = 0.051
Identities = 54/65 (83%)
Strand = Plus / Plus
Query: 559 aaacccaaaccgaaaccagagccaaagccagagccacaaccaaaaccagagcctaagcca 618
|||||| ||||||| |||||||| ||||| ||||| |||||||| || || ||||||
Sbjct: 127 aaacccgaaccgaagccagagcccaagcccgagccgatgccaaaacctgaacccaagcca 186
Query: 619 gagcc 623
|||||
Sbjct: 187 gagcc 191
Score = 42.1 bits (21), Expect = 0.051
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1093 aaacccgaaccaaaaccagagccccaacc 1121
|||||||||||||| ||||||||| ||||
Sbjct: 64 aaacccgaaccaaagccagagcccaaacc 92
Score = 40.1 bits (20), Expect = 0.20
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 753 gccaaagccagagcctaagcccga 776
||||||||| ||||||||||||||
Sbjct: 267 gccaaagccggagcctaagcccga 290
Score = 40.1 bits (20), Expect = 0.20
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 992 aaccagaaccaaagccagagcctaaacc 1019
|||| ||||||||||||||||| |||||
Sbjct: 65 aacccgaaccaaagccagagcccaaacc 92
Score = 40.1 bits (20), Expect = 0.20
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 598 ccaaaaccagagcctaagccagagcctaaacccgaaccga 637
|||||||| || || ||||||||||| |||||||| ||||
Sbjct: 61 ccaaaacccgaaccaaagccagagcccaaacccgagccga 100
>gb|BJ474421.1|BJ474421 BJ474421 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal13l10 3', mRNA sequence
Length = 790
Score = 50.1 bits (25), Expect = 2e-004
Identities = 73/89 (82%)
Strand = Plus / Minus
Query: 793 aagcctgagcctaaacccgaaccaaggccagaacctaagccagagccaaagcctgagccg 852
||||||||||||||||| |||| || ||||| ||||||||||| ||||| ||||||
Sbjct: 638 aagcctgagcctaaaccgatgccaaaacccgaaccgaagccagagcccaagcccgagccg 579
Query: 853 aaaccgaaaccagatccaaagccagagcc 881
| || ||||| || || |||||||||||
Sbjct: 578 atgccaaaacctgaacccaagccagagcc 550
Score = 48.1 bits (24), Expect = 8e-004
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 823 gaacctaagccagagccaaagcctgagccgaaaccgaaaccagatccaaagccagagcc 881
||||| ||||||||||| || || ||||||| || ||||| || ||||||||||||||
Sbjct: 713 gaaccaaagccagagcccaanccagagccgatgccaaaacccgaaccaaagccagagcc 655
Score = 48.1 bits (24), Expect = 8e-004
Identities = 65/79 (82%)
Strand = Plus / Minus
Query: 559 aaacccaaaccgaaaccagagccaaagccagagccacaaccaaaaccagagcctaagcca 618
|||||| |||| || |||||||| || |||||||| |||||||| || || ||||||
Sbjct: 719 aaacccgaaccaaagccagagcccaanccagagccgatgccaaaacccgaaccaaagcca 660
Query: 619 gagcctaaacccgaaccga 637
||||| |||||||| ||||
Sbjct: 659 gagcccaaacccgagccga 641
Score = 48.1 bits (24), Expect = 8e-004
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 721 aagcctgagcctaaaccagaaccaaaaccagagccaaagccagagcctaagcccga 776
||||||||||||||||| |||||||| || || ||||||||||| ||||||||
Sbjct: 638 aagcctgagcctaaaccgatgccaaaacccgaaccgaagccagagcccaagcccga 583
Score = 46.1 bits (23), Expect = 0.003
Identities = 68/83 (81%)
Strand = Plus / Minus
Query: 823 gaacctaagccagagccaaagcctgagccgaaaccgaaaccagatccaaagccagagcca 882
||||| ||||||||||| || || ||||||| || ||||| || || |||||||||||
Sbjct: 536 gaaccgaagccagagcccaaacccgagccgatgccaaaacctgaacccaagccagagccg 477
Query: 883 caaccaaagccagagcctaagcc 905
|||||||| |||||||||||
Sbjct: 476 atgccaaagccggagcctaagcc 454
Score = 44.1 bits (22), Expect = 0.013
Identities = 54/65 (83%)
Strand = Plus / Minus
Query: 691 aaaccagaaccaaagccagagccacaaccaaagcctgagcctaaaccagaaccaaaacca 750
||||| ||||||||||||||||| | ||| |||| ||| ||||| |||||||| |||
Sbjct: 719 aaacccgaaccaaagccagagcccaanccagagccgatgccaaaacccgaaccaaagcca 660
Query: 751 gagcc 755
|||||
Sbjct: 659 gagcc 655
Score = 42.1 bits (21), Expect = 0.051
Identities = 47/56 (83%)
Strand = Plus / Minus
Query: 958 ccaaagcctgagcctaaacccgaaccaagaccagaaccagaaccaaagccagagcc 1013
||||||| |||||| ||||| || || | ||| |||| |||||||||||||||||
Sbjct: 752 ccaaagcntgagcccaaaccagagccgatgccaaaacccgaaccaaagccagagcc 697
Score = 42.1 bits (21), Expect = 0.051
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 1093 aaacccgaaccaaaaccagagccccaacc 1121
|||||||||||||| ||||||||| ||||
Sbjct: 677 aaacccgaaccaaagccagagcccaaacc 649
Score = 42.1 bits (21), Expect = 0.051
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 448 cccgaacctaagccagagcctaagcccga 476
|||||||| ||||||||||| ||||||||
Sbjct: 611 cccgaaccgaagccagagcccaagcccga 583
Score = 42.1 bits (21), Expect = 0.051
Identities = 54/65 (83%)
Strand = Plus / Minus
Query: 559 aaacccaaaccgaaaccagagccaaagccagagccacaaccaaaaccagagcctaagcca 618
|||||| ||||||| |||||||| ||||| ||||| |||||||| || || ||||||
Sbjct: 614 aaacccgaaccgaagccagagcccaagcccgagccgatgccaaaacctgaacccaagcca 555
Query: 619 gagcc 623
|||||
Sbjct: 554 gagcc 550
Score = 42.1 bits (21), Expect = 0.051
Identities = 39/45 (86%)
Strand = Plus / Minus
Query: 921 gccaaagccagagcctaagcccgaaccaaaaccaaagccaaagcc 965
||||||||| |||||||||||||| || | ||||||||| ||||
Sbjct: 474 gccaaagccggagcctaagcccgagccgatgccaaagccagagcc 430
Score = 40.1 bits (20), Expect = 0.20
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1093 aaacccgaaccaaaaccagagccc 1116
|||||||||||||| |||||||||
Sbjct: 719 aaacccgaaccaaagccagagccc 696
Score = 40.1 bits (20), Expect = 0.20
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 992 aaccagaaccaaagccagagcctaaacc 1019
|||| ||||||||||||||||| |||||
Sbjct: 676 aacccgaaccaaagccagagcccaaacc 649
Score = 40.1 bits (20), Expect = 0.20
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 598 ccaaaaccagagcctaagccagagcctaaacccgaaccga 637
|||||||| || || ||||||||||| |||||||| ||||
Sbjct: 545 ccaaaacccgaaccgaagccagagcccaaacccgagccga 506
Score = 40.1 bits (20), Expect = 0.20
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 753 gccaaagccagagcctaagcccga 776
||||||||| ||||||||||||||
Sbjct: 474 gccaaagccggagcctaagcccga 451
>gb|AL505328.1|AL505328 AL505328 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW08B24V 5', mRNA sequence
Length = 689
Score = 48.1 bits (24), Expect = 8e-004
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 894 agagcctaagccagaaccaaaaccagagccaa 925
|||||| ||||||||||| |||||||||||||
Sbjct: 177 agagccaaagccagaacccaaaccagagccaa 208
Score = 42.1 bits (21), Expect = 0.051
Identities = 63/77 (81%)
Strand = Plus / Plus
Query: 908 aaccaaaaccagagccaaagccagagcctaagcccgaaccaaaaccaaagccaaagcctg 967
||||||| ||||| || ||||| ||||| | ||| |||| |||||||||| |||| |
Sbjct: 356 aaccaaagccagatcctaagcccgagccgatgccgaaacccgaaccaaagccggagcccg 415
Query: 968 agcctaaacccgaacca 984
|||||||||| ||||||
Sbjct: 416 agcctaaacctgaacca 432
Score = 42.1 bits (21), Expect = 0.051
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1147 aaaccacagccagaacctaagcccgagcc 1175
|||||| ||||||| ||||||||||||||
Sbjct: 355 aaaccaaagccagatcctaagcccgagcc 383
Score = 40.1 bits (20), Expect = 0.20
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 762 agagcctaagcccgaaccaaaaccagagccaa 793
|||||| ||||| ||||| |||||||||||||
Sbjct: 177 agagccaaagccagaacccaaaccagagccaa 208
>gb|BF260578.2|BF260578 HVSMEf0022G03f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0022G03f, mRNA sequence
Length = 543
Score = 48.1 bits (24), Expect = 8e-004
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 890 agccagagcctaagccagaaccaaaaccagagccaa 925
|||||||||| || |||||||| |||||||||||||
Sbjct: 13 agccagagccaaaaccagaacccaaaccagagccaa 48
Score = 48.1 bits (24), Expect = 8e-004
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 722 agcctgagcctaaaccagaaccaaaaccagagccaa 757
|||| ||||| ||||||||||| |||||||||||||
Sbjct: 13 agccagagccaaaaccagaacccaaaccagagccaa 48
Score = 40.1 bits (20), Expect = 0.20
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 494 agccaaaacctgaaccaaaaccagagcc 521
|||||||||| ||||| |||||||||||
Sbjct: 19 agccaaaaccagaacccaaaccagagcc 46
Score = 40.1 bits (20), Expect = 0.20
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 1084 ccagagcctaaacccgaaccaaaaccagagcc 1115
|||||||| ||||| ||||| |||||||||||
Sbjct: 15 ccagagccaaaaccagaacccaaaccagagcc 46
Score = 40.1 bits (20), Expect = 0.20
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 758 agccagagcctaagcccgaaccaaaaccagagccaa 793
|||||||||| || || ||||| |||||||||||||
Sbjct: 13 agccagagccaaaaccagaacccaaaccagagccaa 48
Score = 40.1 bits (20), Expect = 0.20
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 548 agccagagcctaaacccaaaccgaaaccagagccaa 583
|||||||||| ||||| |||| |||||||||||||
Sbjct: 13 agccagagccaaaaccagaacccaaaccagagccaa 48
>gb|BI960114.1|BI960114 HVSMEn0023E14f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0023E14f, mRNA sequence
Length = 630
Score = 48.1 bits (24), Expect = 8e-004
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 721 aagcctgagcctaaaccagaaccaaaaccagagccaaagccagagcctaagcccga 776
|||| |||||||||||| |||||||| || |||||||||||||| ||||||||
Sbjct: 536 aagcttgagcctaaaccgatgccaaaacccgacccaaagccagagcccaagcccga 481
Score = 46.1 bits (23), Expect = 0.003
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 910 ccaaaaccagagccaaagccagagcctaagcccga 944
|||||||| || |||||||||||||| ||||||||
Sbjct: 515 ccaaaacccgacccaaagccagagcccaagcccga 481
Score = 42.1 bits (21), Expect = 0.051
Identities = 45/53 (84%)
Strand = Plus / Minus
Query: 829 aagccagagccaaagcctgagccgaaaccgaaaccagatccaaagccagagcc 881
||||||||||| ||||| ||||||| || ||||| || || |||||||||||
Sbjct: 500 aagccagagcccaagcccgagccgatgccaaaacctgaacccaagccagagcc 448
>gb|BJ467242.1|BJ467242 BJ467242 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags26d23 3', mRNA sequence
Length = 644
Score = 48.1 bits (24), Expect = 8e-004
Identities = 68/83 (81%)
Strand = Plus / Minus
Query: 823 gaacctaagccagagccaaagcctgagccgaaaccgaaaccagatccaaagccagagcca 882
||||| ||||||||||| || || ||||||| || ||||| || || |||||||||||
Sbjct: 434 gaaccgaagccagagcccaancccgagccgatgccaaaacctgaacccaagccagagccg 375
Query: 883 caaccaaagccagagcctaagcc 905
|||||||| |||||||||||
Sbjct: 374 atgccaaagccggagcctaagcc 352
Score = 42.1 bits (21), Expect = 0.051
Identities = 39/45 (86%)
Strand = Plus / Minus
Query: 921 gccaaagccagagcctaagcccgaaccaaaaccaaagccaaagcc 965
||||||||| |||||||||||||| || | ||||||||| ||||
Sbjct: 372 gccaaagccggagcctaagcccgagccgatgccaaagccagagcc 328
Score = 40.1 bits (20), Expect = 0.20
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 753 gccaaagccagagcctaagcccga 776
||||||||| ||||||||||||||
Sbjct: 372 gccaaagccggagcctaagcccga 349
>gb|BQ761469.1|BQ761469 EBro07_SQ002_O17_R root, 3 week, reduced light, cv Optic, EBro07
Hordeum vulgare subsp. vulgare cDNA clone
EBro07_SQ002_O17 5', mRNA sequence
Length = 518
Score = 48.1 bits (24), Expect = 8e-004
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 448 cccgaacctaagccagagcctaagcccgaacc 479
|||||||||||||||||||| |||||| ||||
Sbjct: 414 cccgaacctaagccagagcccaagcccaaacc 445
>gb|BQ763806.1|BQ763806 EBro03_SQ005_P09_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ005_P09 5', mRNA sequence
Length = 664
Score = 48.1 bits (24), Expect = 8e-004
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1010 agcctaaacctgaaccaaaaccgaaacc 1037
|||||||||||||||| |||||||||||
Sbjct: 411 agcctaaacctgaaccgaaaccgaaacc 438
>gb|BG299293.1|BG299293 HVSMEa0019D20f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0019D20f, mRNA sequence
Length = 644
Score = 46.1 bits (23), Expect = 0.003
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 897 gcctaagccagaaccaaaaccagagccaaagccagagcc 935
|||||||||||| || || |||||||| |||||||||||
Sbjct: 463 gcctaagccagagcccaagccagagcccaagccagagcc 501
Score = 44.1 bits (22), Expect = 0.013
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 675 gcctaagcctgagccgaaaccagaaccaaagccagagccacaaccaaagc 724
||||||||| ||||| || ||||| || ||||||||||||| ||| ||||
Sbjct: 463 gcctaagccagagcccaagccagagcccaagccagagccaccaccgaagc 512
Score = 40.1 bits (20), Expect = 0.20
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 889 aagccagagcctaagccagaaccaaaaccagagcca 924
||||||||||| |||||||| || || |||||||||
Sbjct: 467 aagccagagcccaagccagagcccaagccagagcca 502
Score = 40.1 bits (20), Expect = 0.20
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 664 cctaagccagagcctaagcc 683
||||||||||||||||||||
Sbjct: 434 cctaagccagagcctaagcc 453
Score = 40.1 bits (20), Expect = 0.20
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 454 cctaagccagagcctaagcc 473
||||||||||||||||||||
Sbjct: 434 cctaagccagagcctaagcc 453
>gb|BF256553.2|BF256553 HVSMEf0010F05f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0010F05f, mRNA sequence
Length = 835
Score = 46.1 bits (23), Expect = 0.003
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 897 gcctaagccagaaccaaaaccagagccaaagccagagcc 935
|||||||||||| || || |||||||| |||||||||||
Sbjct: 446 gcctaagccagagcccaagccagagcccaagccagagcc 484
Score = 44.1 bits (22), Expect = 0.013
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 675 gcctaagcctgagccgaaaccagaaccaaagccagagccacaaccaaagc 724
||||||||| ||||| || ||||| || ||||||||||||| ||| ||||
Sbjct: 446 gcctaagccagagcccaagccagagcccaagccagagccaccaccgaagc 495
Score = 40.1 bits (20), Expect = 0.20
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 889 aagccagagcctaagccagaaccaaaaccagagcca 924
||||||||||| |||||||| || || |||||||||
Sbjct: 450 aagccagagcccaagccagagcccaagccagagcca 485
Score = 40.1 bits (20), Expect = 0.20
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 664 cctaagccagagcctaagcc 683
||||||||||||||||||||
Sbjct: 417 cctaagccagagcctaagcc 436
Score = 40.1 bits (20), Expect = 0.20
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 454 cctaagccagagcctaagcc 473
||||||||||||||||||||
Sbjct: 417 cctaagccagagcctaagcc 436
>gb|BI953265.1|BI953265 HVSMEm0011O21f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0011O21f, mRNA sequence
Length = 893
Score = 46.1 bits (23), Expect = 0.003
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 922 ccaaagccagagcctaagcccga 944
|||||||||||||||||||||||
Sbjct: 566 ccaaagccagagcctaagcccga 588
Score = 46.1 bits (23), Expect = 0.003
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 754 ccaaagccagagcctaagcccga 776
|||||||||||||||||||||||
Sbjct: 566 ccaaagccagagcctaagcccga 588
Score = 42.1 bits (21), Expect = 0.051
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 729 gcctaaaccagaaccaaaaccagagccaaagccagagccta 769
||||||||||||||| ||||| ||||| || || |||||||
Sbjct: 418 gcctaaaccagaaccgaaacctgagcccaaacctgagccta 458
Score = 40.1 bits (20), Expect = 0.20
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 457 aagccagagcctaagcccga 476
||||||||||||||||||||
Sbjct: 569 aagccagagcctaagcccga 588
Score = 40.1 bits (20), Expect = 0.20
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1054 ccaaagccagagcctaagcc 1073
||||||||||||||||||||
Sbjct: 566 ccaaagccagagcctaagcc 585
Score = 40.1 bits (20), Expect = 0.20
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 886 ccaaagccagagcctaagcc 905
||||||||||||||||||||
Sbjct: 566 ccaaagccagagcctaagcc 585
>gb|AV909905.1|AV909905 AV909905 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak2g09 5', mRNA sequence
Length = 593
Score = 46.1 bits (23), Expect = 0.003
Identities = 68/83 (81%)
Strand = Plus / Plus
Query: 823 gaacctaagccagagccaaagcctgagccgaaaccgaaaccagatccaaagccagagcca 882
||||| ||||||||||| ||||| ||||||| || ||||| || || ||||| |||||
Sbjct: 120 gaaccgaagccagagcccaagcccgagccgatgccaaaacctgaacccaagcccgagccg 179
Query: 883 caaccaaagccagagcctaagcc 905
|||||||||||||| |||||
Sbjct: 180 atgccaaagccagagcccaagcc 202
Score = 42.1 bits (21), Expect = 0.051
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 448 cccgaacctaagccagagcctaagcccga 476
|||||||| ||||||||||| ||||||||
Sbjct: 117 cccgaaccgaagccagagcccaagcccga 145
>gb|AV919495.1|AV919495 AV919495 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags6e15 3', mRNA sequence
Length = 800
Score = 46.1 bits (23), Expect = 0.003
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 823 gaacctaagccagagccaaagcctgagccgaaaccgaaaccagatccaaagccagagcc 881
||||| ||||||||||| ||||| ||||||| || ||||| || || |||||||||||
Sbjct: 553 gaaccgaagccagagcccaagcccgagccgatgccaaaacctgaacccaagccagagcc 495
Score = 46.1 bits (23), Expect = 0.003
Identities = 68/83 (81%)
Strand = Plus / Minus
Query: 823 gaacctaagccagagccaaagcctgagccgaaaccgaaaccagatccaaagccagagcca 882
||||| ||||||||||| || || ||||||| || ||||| || || |||||||||||
Sbjct: 481 gaaccgaagccagagcccaaacccgagccgatgccaaaacctgaacccaagccagagccg 422
Query: 883 caaccaaagccagagcctaagcc 905
|||||||| |||||||||||
Sbjct: 421 atgccaaagccggagcctaagcc 399
Score = 42.1 bits (21), Expect = 0.051
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 992 aaccagaaccaaagccagagcctaaacc 1019
|||| ||||||||||||||||| |||||
Sbjct: 665 aaccngaaccaaagccagagcccaaacc 638
Score = 42.1 bits (21), Expect = 0.051
Identities = 47/56 (83%)
Strand = Plus / Minus
Query: 721 aagcctgagcctaaaccagaaccaaaaccagagccaaagccagagcctaagcccga 776
|||| |||||||||||| |||||||| || || ||||||||||| ||||||||
Sbjct: 583 aagcntgagcctaaaccgatgccaaaacccgaaccgaagccagagcccaagcccga 528
Score = 42.1 bits (21), Expect = 0.051
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 448 cccgaacctaagccagagcctaagcccga 476
|||||||| ||||||||||| ||||||||
Sbjct: 556 cccgaaccgaagccagagcccaagcccga 528
Score = 42.1 bits (21), Expect = 0.051
Identities = 54/65 (83%)
Strand = Plus / Minus
Query: 559 aaacccaaaccgaaaccagagccaaagccagagccacaaccaaaaccagagcctaagcca 618
|||||| ||||||| |||||||| ||||| ||||| |||||||| || || ||||||
Sbjct: 559 aaacccgaaccgaagccagagcccaagcccgagccgatgccaaaacctgaacccaagcca 500
Query: 619 gagcc 623
|||||
Sbjct: 499 gagcc 495
Score = 42.1 bits (21), Expect = 0.051
Identities = 39/45 (86%)
Strand = Plus / Minus
Query: 921 gccaaagccagagcctaagcccgaaccaaaaccaaagccaaagcc 965
||||||||| |||||||||||||| || | ||||||||| ||||
Sbjct: 419 gccaaagccggagcctaagcccgagccgatgccaaagccagagcc 375
Score = 40.1 bits (20), Expect = 0.20
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 598 ccaaaaccagagcctaagccagagcctaaacccgaaccga 637
|||||||| || || ||||||||||| |||||||| ||||
Sbjct: 490 ccaaaacccgaaccgaagccagagcccaaacccgagccga 451
Score = 40.1 bits (20), Expect = 0.20
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 753 gccaaagccagagcctaagcccga 776
||||||||| ||||||||||||||
Sbjct: 419 gccaaagccggagcctaagcccga 396
>gb|AV919765.1|AV919765 AV919765 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags7i05 3', mRNA sequence
Length = 860
Score = 46.1 bits (23), Expect = 0.003
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 823 gaacctaagccagagccaaagcctgagccgaaaccgaaaccagatccaaagccagagcc 881
||||| ||||||||||| ||||| ||||||| || ||||| || || |||||||||||
Sbjct: 587 gaaccgaagccagagcccaagcccgagccgatgccaaaacctgaacccaagccagagcc 529
Score = 46.1 bits (23), Expect = 0.003
Identities = 68/83 (81%)
Strand = Plus / Minus
Query: 823 gaacctaagccagagccaaagcctgagccgaaaccgaaaccagatccaaagccagagcca 882
||||| ||||||||||| || || ||||||| || ||||| || || |||||||||||
Sbjct: 515 gaaccgaagccagagcccaaacccgagccgatgccaaaacctgaacccaagccagagccg 456
Query: 883 caaccaaagccagagcctaagcc 905
|||||||| |||||||||||
Sbjct: 455 atgccaaagccggagcctaagcc 433
Score = 42.1 bits (21), Expect = 0.051
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 1093 aaacccgaaccaaaaccagagccccaacc 1121
|||||||||||||| ||||||||| ||||
Sbjct: 656 aaacccgaaccaaagccagagcccaaacc 628
Score = 42.1 bits (21), Expect = 0.051
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 448 cccgaacctaagccagagcctaagcccga 476
|||||||| ||||||||||| ||||||||
Sbjct: 590 cccgaaccgaagccagagcccaagcccga 562
Score = 42.1 bits (21), Expect = 0.051
Identities = 54/65 (83%)
Strand = Plus / Minus
Query: 559 aaacccaaaccgaaaccagagccaaagccagagccacaaccaaaaccagagcctaagcca 618
|||||| ||||||| |||||||| ||||| ||||| |||||||| || || ||||||
Sbjct: 593 aaacccgaaccgaagccagagcccaagcccgagccgatgccaaaacctgaacccaagcca 534
Query: 619 gagcc 623
|||||
Sbjct: 533 gagcc 529
Score = 42.1 bits (21), Expect = 0.051
Identities = 39/45 (86%)
Strand = Plus / Minus
Query: 921 gccaaagccagagcctaagcccgaaccaaaaccaaagccaaagcc 965
||||||||| |||||||||||||| || | ||||||||| ||||
Sbjct: 453 gccaaagccggagcctaagcccgagccgatgccaaagccagagcc 409
Score = 40.1 bits (20), Expect = 0.20
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 992 aaccagaaccaaagccagagcctaaacc 1019
|||| ||||||||||||||||| |||||
Sbjct: 655 aacccgaaccaaagccagagcccaaacc 628
Score = 40.1 bits (20), Expect = 0.20
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 598 ccaaaaccagagcctaagccagagcctaaacccgaaccga 637
|||||||| || || ||||||||||| |||||||| ||||
Sbjct: 659 ccaaaacccgaaccaaagccagagcccaaacccgagccga 620
Score = 40.1 bits (20), Expect = 0.20
Identities = 47/56 (83%)
Strand = Plus / Minus
Query: 721 aagcctgagcctaaaccagaaccaaaaccagagccaaagccagagcctaagcccga 776
|||| |||||||||||| |||||||| || || ||||||||||| ||||||||
Sbjct: 617 aagcttgagcctaaaccgatgccaaaacccgaaccgaagccagagcccaagcccga 562
Score = 40.1 bits (20), Expect = 0.20
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 598 ccaaaaccagagcctaagccagagcctaaacccgaaccga 637
|||||||| || || ||||||||||| |||||||| ||||
Sbjct: 524 ccaaaacccgaaccgaagccagagcccaaacccgagccga 485
Score = 40.1 bits (20), Expect = 0.20
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 753 gccaaagccagagcctaagcccga 776
||||||||| ||||||||||||||
Sbjct: 453 gccaaagccggagcctaagcccga 430
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 158,751
Number of Sequences: 312970
Number of extensions: 158751
Number of successful extensions: 48466
Number of sequences better than 0.5: 119
Number of HSP's better than 0.5 without gapping: 119
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 38310
Number of HSP's gapped (non-prelim): 9411
length of query: 1471
length of database: 175,134,539
effective HSP length: 19
effective length of query: 1452
effective length of database: 169,188,109
effective search space: 245661134268
effective search space used: 245661134268
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)