BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2493944.2.2
(2027 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CK122199.1|CK122199 BES1824102c17 BES1824 Hordeum vulgar... 396 e-108
emb|AJ534447.1|HVU534447 Hordeum vulgare mRNA for apoplasti... 396 e-108
gb|BU994370.1|BU994370 HM06N08r HM Hordeum vulgare subsp. v... 349 2e-094
gb|BF625535.2|BF625535 HVSMEa0011C02f Hordeum vulgare seedl... 190 1e-046
gb|BE559434.1|BE559434 HV_CEb0024K20f Hordeum vulgare seedl... 190 1e-046
gb|BF264866.2|BF264866 HV_CEa0010J14f Hordeum vulgare seedl... 190 1e-046
gb|BE214358.2|BE214358 HV_CEb0003D11f Hordeum vulgare seedl... 190 1e-046
gb|BI778225.2|BI778225 EBro07_SQ002_J10_R root, 3 week, red... 190 1e-046
gb|BQ468711.1|BQ468711 HM02B12r HM Hordeum vulgare subsp. v... 188 5e-046
gb|BQ468801.1|BQ468801 HM02G04r HM Hordeum vulgare subsp. v... 168 5e-040
gb|BU973477.1|BU973477 HB25B07r BC Hordeum vulgare subsp. v... 168 5e-040
gb|BU996678.1|BU996678 HM14G07r HM Hordeum vulgare subsp. v... 165 7e-039
gb|BU996531.1|BU996531 HM13O15r HM Hordeum vulgare subsp. v... 161 1e-037
gb|BQ764136.1|BQ764136 EBro03_SQ006_J10_R root, 3 week, wat... 155 7e-036
gb|BQ762965.1|BQ762965 EBro02_SQ006_O16_R root, 3 week, hyd... 123 2e-026
gb|AL503000.1|AL503000 AL503000 Hordeum vulgare Barke roots... 119 4e-025
gb|AL505748.1|AL505748 AL505748 Hordeum vulgare Barke roots... 119 4e-025
gb|BF267660.3|BF267660 HV_CEa0018I16f Hordeum vulgare seedl... 119 4e-025
gb|BF064963.3|BF064963 HV_CEb0022D03f Hordeum vulgare seedl... 119 4e-025
gb|AV924971.1|AV924971 AV924971 K. Sato unpublished cDNA li... 119 4e-025
gb|AV924972.1|AV924972 AV924972 K. Sato unpublished cDNA li... 119 4e-025
gb|AV930059.1|AV930059 AV930059 K. Sato unpublished cDNA li... 119 4e-025
gb|AV930060.1|AV930060 AV930060 K. Sato unpublished cDNA li... 119 4e-025
gb|AJ434754.1|AJ434754 AJ434754 S00002 Hordeum vulgare subs... 119 4e-025
gb|BJ449827.1|BJ449827 BJ449827 K. Sato unpublished cDNA li... 119 4e-025
gb|BJ457246.1|BJ457246 BJ457246 K. Sato unpublished cDNA li... 119 4e-025
gb|BJ467660.1|BJ467660 BJ467660 K. Sato unpublished cDNA li... 119 4e-025
gb|BQ760946.1|BQ760946 EBro03_SQ003_O23_R root, 3 week, wat... 119 4e-025
gb|BF260173.2|BF260173 HVSMEf0021E20f Hordeum vulgare seedl... 101 9e-020
gb|BI959253.1|BI959253 HVSMEn0018O17f Hordeum vulgare rachi... 82 8e-014
gb|BI960418.1|BI960418 HVSMEn0024I13f Hordeum vulgare rachi... 82 8e-014
gb|BQ754305.1|BQ754305 EBca01_SQ003_I07_R carpel, pre-anthe... 82 8e-014
gb|BI951140.1|BI951140 HVSMEl0024K02f Hordeum vulgare spike... 80 3e-013
gb|CB879899.1|CB879899 HP08F21T HP Hordeum vulgare subsp. v... 74 2e-011
gb|BG343465.2|BG343465 HVSMEg0005N10f Hordeum vulgare pre-a... 70 3e-010
gb|BQ765899.1|BQ765899 EBro03_SQ008_A13_R root, 3 week, wat... 70 3e-010
gb|BF630067.2|BF630067 HVSMEb0007N12f Hordeum vulgare seedl... 68 1e-009
gb|BF258913.2|BF258913 HVSMEf0017A16f Hordeum vulgare seedl... 68 1e-009
gb|BF065803.2|BF065803 HV_CEb0014A16f Hordeum vulgare seedl... 68 1e-009
gb|BE558756.2|BE558756 HV_CEb0020F02f Hordeum vulgare seedl... 68 1e-009
gb|AV926089.1|AV926089 AV926089 K. Sato unpublished cDNA li... 68 1e-009
gb|BQ471962.1|BQ471962 HV04A04r HV Hordeum vulgare subsp. v... 68 1e-009
gb|BQ768116.1|BQ768116 EBro08_SQ010_A24_R root, 3 week, dro... 68 1e-009
gb|BU995607.1|BU995607 HM10M18r HM Hordeum vulgare subsp. v... 68 1e-009
gb|BQ468368.1|BQ468368 HM01B03T HM Hordeum vulgare subsp. v... 66 5e-009
gb|BF254441.2|BF254441 HVSMEf0004A12f Hordeum vulgare seedl... 62 8e-008
gb|CB882214.1|CB882214 HL01D13w HL Hordeum vulgare subsp. v... 62 8e-008
gb|AL505004.1|AL505004 AL505004 Hordeum vulgare Barke roots... 60 3e-007
gb|BF254279.2|BF254279 HVSMEf0003I12f Hordeum vulgare seedl... 60 3e-007
gb|BF616993.2|BF616993 HVSMEc0014D10f Hordeum vulgare seedl... 54 2e-005
gb|BF255160.2|BF255160 HVSMEf0006B22f Hordeum vulgare seedl... 54 2e-005
gb|BE559132.2|BE559132 HV_CEb0023A11f Hordeum vulgare seedl... 54 2e-005
gb|BQ468810.1|BQ468810 HM02G15r HM Hordeum vulgare subsp. v... 54 2e-005
gb|AL505127.1|AL505127 AL505127 Hordeum vulgare Barke roots... 50 3e-004
gb|BF627833.2|BF627833 HVSMEb0005O19f Hordeum vulgare seedl... 50 3e-004
gb|BI952001.1|BI952001 HVSMEm0004C17f Hordeum vulgare green... 50 3e-004
gb|BI952802.1|BI952802 HVSMEm0007M07f Hordeum vulgare green... 50 3e-004
gb|AV923014.1|AV923014 AV923014 K. Sato unpublished cDNA li... 50 3e-004
gb|AV923840.1|AV923840 AV923840 K. Sato unpublished cDNA li... 50 3e-004
gb|AV923941.1|AV923941 AV923941 K. Sato unpublished cDNA li... 50 3e-004
gb|AV924542.1|AV924542 AV924542 K. Sato unpublished cDNA li... 50 3e-004
gb|AV926810.1|AV926810 AV926810 K. Sato unpublished cDNA li... 50 3e-004
gb|BQ463718.1|BQ463718 HG01D14r HG Hordeum vulgare subsp. v... 50 3e-004
gb|BQ767484.1|BQ767484 EBro08_SQ009_D05_R root, 3 week, dro... 50 3e-004
gb|CA020717.1|CA020717 HZ37F12r HZ Hordeum vulgare subsp. v... 50 3e-004
gb|AL450603.1|AL450603 AL450603 Hordeum vulgare Barke etiol... 48 0.001
gb|CA019964.1|CA019964 HV13O24r HV Hordeum vulgare subsp. v... 48 0.001
gb|AL507249.1|AL507249 AL507249 Hordeum vulgare Barke devel... 46 0.005
gb|AL507250.1|AL507250 AL507250 Hordeum vulgare Barke devel... 46 0.005
gb|AL507294.1|AL507294 AL507294 Hordeum vulgare Barke devel... 46 0.005
gb|AL507193.1|AL507193 AL507193 Hordeum vulgare Barke devel... 44 0.018
gb|BF254630.1|BF254630 HVSMEf0004I24f Hordeum vulgare seedl... 44 0.018
gb|AV927370.1|AV927370 AV927370 K. Sato unpublished cDNA li... 44 0.018
gb|CB883585.1|CB883585 HQ02L05w HQ Hordeum vulgare subsp. v... 44 0.018
gb|BE420989.1|BE420989 HWM004.F06 ITEC HWM Barley Leaf Libr... 42 0.071
gb|AL502406.1|AL502406 AL502406 Hordeum vulgare Barke roots... 42 0.071
gb|BF618065.2|BF618065 HVSMEc0003K12f Hordeum vulgare seedl... 42 0.071
gb|BF256656.2|BF256656 HVSMEf0010J22f Hordeum vulgare seedl... 42 0.071
gb|BF260867.2|BF260867 HVSMEf0023C11f Hordeum vulgare seedl... 42 0.071
gb|BI953662.1|BI953662 HVSMEm0013M11f Hordeum vulgare green... 42 0.071
gb|BF263316.2|BF263316 HV_CEa0006G21f Hordeum vulgare seedl... 42 0.071
gb|BF263973.2|BF263973 HV_CEa0008D03f Hordeum vulgare seedl... 42 0.071
gb|BF258931.3|BF258931 HVSMEf0017B15f Hordeum vulgare seedl... 42 0.071
gb|BF267767.3|BF267767 HV_CEa0018N10f Hordeum vulgare seedl... 42 0.071
gb|AV928934.1|AV928934 AV928934 K. Sato unpublished cDNA li... 42 0.071
gb|AV930971.1|AV930971 AV930971 K. Sato unpublished cDNA li... 42 0.071
gb|AV931702.1|AV931702 AV931702 K. Sato unpublished cDNA li... 42 0.071
gb|BQ468675.1|BQ468675 HM01P04T HM Hordeum vulgare subsp. v... 42 0.071
gb|BQ659924.1|BQ659924 HG01D14u HG Hordeum vulgare subsp. v... 42 0.071
gb|BQ660912.1|BQ660912 HM01B03w HM Hordeum vulgare subsp. v... 42 0.071
gb|BQ661106.1|BQ661106 HM01P04w HM Hordeum vulgare subsp. v... 42 0.071
gb|CA030695.1|CA030695 HX07N13r HX Hordeum vulgare subsp. v... 42 0.071
gb|CB875288.1|CB875288 HX07N13w HX Hordeum vulgare subsp. v... 42 0.071
gb|CB881780.1|CB881780 HM10N17w HM Hordeum vulgare subsp. v... 42 0.071
gb|BF631001.2|BF631001 HVSMEb0014L01f Hordeum vulgare seedl... 40 0.28
gb|BE216034.1|BE216034 HV_CEb0009C24f Hordeum vulgare seedl... 40 0.28
gb|BG344005.2|BG344005 HVSMEg0007F22f Hordeum vulgare pre-a... 40 0.28
gb|BE195367.3|BE195367 HVSMEh0089A16f Hordeum vulgare 5-45 ... 40 0.28
gb|BF262904.3|BF262904 HV_CEa0005E13f Hordeum vulgare seedl... 40 0.28
gb|BQ470110.1|BQ470110 HX01M22T HX Hordeum vulgare subsp. v... 40 0.28
gb|BI778837.2|BI778837 EBro01_SQ001_L05_R root, 3 week, hyd... 40 0.28
gb|BU982210.1|BU982210 HA25N13r HA Hordeum vulgare subsp. v... 40 0.28
gb|CA030107.1|CA030107 HX06B19r HX Hordeum vulgare subsp. v... 40 0.28
gb|CA030358.1|CA030358 HX06N04r HX Hordeum vulgare subsp. v... 40 0.28
gb|CD662700.1|CD662700 UCRHV18_02dd02_b1 Drought-stressed D... 40 0.28
gb|CD240721.1|CD240721 LP10327 Lemma/palea-enriched cDNA li... 40 0.28
emb|AJ567377.2|HVU567377 Hordeum vulgare partial mRNA for s... 40 0.28
>gb|CK122199.1|CK122199 BES1824102c17 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010C172 5-PRIME, mRNA sequence
Length = 718
Score = 396 bits (200), Expect = e-108
Identities = 394/458 (86%), Gaps = 3/458 (0%)
Strand = Plus / Plus
Query: 857 ccggcccaagggtgaagcacgtgctcaagaacagcctcgacctccggcggtacgactact 916
||||||| ||||||||||||||||||||||||||||||||||| || || ||||||||||
Sbjct: 168 ccggccccagggtgaagcacgtgctcaagaacagcctcgacctgcgccgctacgactact 227
Query: 917 acaccgtgggcacgtaccacccgagggccgagcggtacgtgccggacgaccccgccggcg 976
||||||| ||||| ||| ||| | | | |||||||||||||||||| ||||||||||||
Sbjct: 228 acaccgtcggcacctacgaccgcaagacggagcggtacgtgccggacaaccccgccggcg 287
Query: 977 acgagcaccgcctgcgctacgactacggcaacttctacgcgtccaagacgttctacgacc 1036
||||||||| |||||||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 288 acgagcaccacctgcgctacgactacggcaacttctacgcctccaagaccttctacgacc 347
Query: 1037 cggccaagcggcgccgcatcctgtggggctgggctaacgagtccgacaccgccgccgacg 1096
||| |||||| ||||||||||| ||||||||||| |||||||||||| |||||| |||||
Sbjct: 348 cggtcaagcgccgccgcatcctctggggctgggccaacgagtccgacgccgccgtcgacg 407
Query: 1097 atgtggccaaaggctgggctggaatccaggccattccaaggacggtgtggctggacccca 1156
| || ||||| || ||||| ||||||||||| ||||| || | ||| ||||||||||| |
Sbjct: 408 acgtcgccaagggatgggccggaatccaggcgattccgagaaaggtttggctggacccga 467
Query: 1157 gcgggaagcagctgttgcagtggcctatcgaggaggtggaggcgctgagag---caaagt 1213
| |||| ||||||| |||||||||| | |||||| | ||||||||||| | || |
Sbjct: 468 gtgggaggcagctgatgcagtggcccgtggaggagcttgaggcgctgagggggaaaaggc 527
Query: 1214 cggtcactctcaagaacagggtaatcaaggcaggacatcacgtcgaggtgaccgggatac 1273
|||||| ||||||||||||| ||||| ||| | ||||||||||| |||||| |||
Sbjct: 528 cggtcagcatcaagaacagggtggtcaagcggggagagcacgtcgaggtcaccgggctac 587
Query: 1274 agacggcacaggctgacgtggaggtgagcttcgaggtg 1311
||| ||||||||||||||||||||||||| ||||||
Sbjct: 588 ggacctcacaggctgacgtggaggtgagctttgaggtg 625
Score = 149 bits (75), Expect = 4e-034
Identities = 105/115 (91%)
Strand = Plus / Plus
Query: 695 cccgcggcgtggcgtacgtgtaccgcagccgcgacttccggcggtggaggcgggtgcggc 754
||||||||||||||||||||||||| |||||||||||| |||||||| ||||||| ||
Sbjct: 3 cccgcggcgtggcgtacgtgtaccggagccgcgacttcatgcggtggacgcgggtgagga 62
Query: 755 ggccgctgcactcggcgcccacggggatgtgggagtgccccgacttctacccggt 809
||||||||||||||||||||||||||||||||||||||| ||| | ||||||||
Sbjct: 63 agccgctgcactcggcgcccacggggatgtgggagtgcccggacctgtacccggt 117
>emb|AJ534447.1|HVU534447 Hordeum vulgare mRNA for apoplastic invertase 1 (cwinw1 gene)
Length = 2095
Score = 396 bits (200), Expect = e-108
Identities = 394/458 (86%), Gaps = 3/458 (0%)
Strand = Plus / Plus
Query: 857 ccggcccaagggtgaagcacgtgctcaagaacagcctcgacctccggcggtacgactact 916
||||||| ||||||||||||||||||||||||||||||||||| || || ||||||||||
Sbjct: 862 ccggccccagggtgaagcacgtgctcaagaacagcctcgacctgcgccgctacgactact 921
Query: 917 acaccgtgggcacgtaccacccgagggccgagcggtacgtgccggacgaccccgccggcg 976
||||||| ||||| ||| ||| | | | |||||||||||||||||| ||||||||||||
Sbjct: 922 acaccgtcggcacctacgaccgcaagacggagcggtacgtgccggacaaccccgccggcg 981
Query: 977 acgagcaccgcctgcgctacgactacggcaacttctacgcgtccaagacgttctacgacc 1036
||||||||| |||||||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 982 acgagcaccacctgcgctacgactacggcaacttctacgcctccaagaccttctacgacc 1041
Query: 1037 cggccaagcggcgccgcatcctgtggggctgggctaacgagtccgacaccgccgccgacg 1096
||| |||||| ||||||||||| ||||||||||| |||||||||||| |||||| |||||
Sbjct: 1042 cggtcaagcgccgccgcatcctctggggctgggccaacgagtccgacgccgccgtcgacg 1101
Query: 1097 atgtggccaaaggctgggctggaatccaggccattccaaggacggtgtggctggacccca 1156
| || ||||| || ||||| ||||||||||| ||||| || | ||| ||||||||||| |
Sbjct: 1102 acgtcgccaagggatgggccggaatccaggcgattccgagaaaggtttggctggacccga 1161
Query: 1157 gcgggaagcagctgttgcagtggcctatcgaggaggtggaggcgctgagag---caaagt 1213
| |||| ||||||| |||||||||| | |||||| | ||||||||||| | || |
Sbjct: 1162 gtgggaggcagctgatgcagtggcccgtggaggagcttgaggcgctgagggggaaaaggc 1221
Query: 1214 cggtcactctcaagaacagggtaatcaaggcaggacatcacgtcgaggtgaccgggatac 1273
|||||| ||||||||||||| ||||| ||| | ||||||||||| |||||| |||
Sbjct: 1222 cggtcagcatcaagaacagggtggtcaagcggggagagcacgtcgaggtcaccgggctac 1281
Query: 1274 agacggcacaggctgacgtggaggtgagcttcgaggtg 1311
||| ||||||||||||||||||||||||| ||||||
Sbjct: 1282 ggacctcacaggctgacgtggaggtgagctttgaggtg 1319
Score = 321 bits (162), Expect = 5e-086
Identities = 365/431 (84%), Gaps = 3/431 (0%)
Strand = Plus / Plus
Query: 202 gggtaccacttccagccccccaagaactggatcaatgatcccaacgcgcccatgtactac 261
||||||||||||| |||| |||||||||||||| ||||||||||||||||||||||||
Sbjct: 216 gggtaccacttccggcccataaagaactggatcaacgatcccaacgcgcccatgtactac 275
Query: 262 aaggggtggtaccatttcttctaccaatacaatcccaagggcgccgtatggggcaacatc 321
||||||||||||||||| |||||||| ||||| |||||||| || || ||||||||||||
Sbjct: 276 aaggggtggtaccatttgttctaccagtacaaccccaagggtgcggtgtggggcaacatc 335
Query: 322 gtgtgggcgcactcggtgtcgcgagacctcatcaactgggtggcgctagagccggcgctc 381
||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||| ||
Sbjct: 336 gtgtgggcgcactcggtgtcgcgtgacctcatcaactgggtggcgctggagacggcaatc 395
Query: 382 agaccaagcatcccgggcgacaggtacggctgctggtccgggtcggcgacggtgctgccc 441
|| |||||| | |||| |||||| |||||||| |||||||||| | |||| |
Sbjct: 396 cagccgagcatcaagtcggacaagtacgggtgctggtcggggtcggcgaycatcctgcgc 455
Query: 442 gacggcggcggcccggtgatcatgtacacgggcgtggaccacccggacatcaactaccag 501
|||||| || |||| |||||||||||||||| | |||| | | |||||||||||| ||
Sbjct: 456 gacggc-acg--ccggcgatcatgtacacgggcatcgaccgcgccgacatcaactacgag 512
Query: 502 gtccagaacgtggcgtacccgaagaacgtgtcggacccgctgctccgggagtgggtgaag 561
|| |||||| | || | ||| |||||| |||||||||||||||||| ||||||||||||
Sbjct: 513 gtgcagaacatcgccttccccaagaacaagtcggacccgctgctccgcgagtgggtgaag 572
Query: 562 ccctcgcacaaccccgtcatcgtccccgagggcggcatcaacgcgacgcagttccgcgac 621
|| | |||||| ||||||| || ||||||||||||||||| || |||||||| |||
Sbjct: 573 ccgcggggcaacccgatcatcgtgccggagggcggcatcaacgccacccagttccgggac 632
Query: 622 ccgaccacggc 632
||||| |||||
Sbjct: 633 ccgacgacggc 643
Score = 188 bits (95), Expect = 5e-046
Identities = 245/295 (83%)
Strand = Plus / Plus
Query: 1504 aagcccgtggtgctcatgtgcaccgaccctaccaagtcgtcccagaacccgaacctgtac 1563
|||||||| || ||||||||| |||| || |||| ||| || | |||||||||||| |||
Sbjct: 1521 aagcccgtcgtcctcatgtgctccgatccaaccatgtcatctctgaacccgaacctatac 1580
Query: 1564 cgcccgacatttgcaggatttgtcgacacggacatctcgaacggcaagatatccctgaga 1623
||||| || ||||| ||||| ||||| ||||| | || ||||||||||| ||||||
Sbjct: 1581 aagccgaccttcgcaggctttgttgacactgacatagccaagggcaagatatctctgaga 1640
Query: 1624 agcctgatcgaccgatcggtcgttgagagcttcggagccgggggcaagacctgcatcctc 1683
||||||||||| || || ||||| ||||||||||| || ||||||| |||||||||||||
Sbjct: 1641 agcctgatcgatcggtccgtcgtggagagcttcggggcagggggcaggacctgcatcctc 1700
Query: 1684 tccagggtctacccgtcgctggccatcggcaaggacgctcgcctctacgtgttcaacaac 1743
||| ||||||||||| |||| || | |||||| |||||||||| |||| |||||||||
Sbjct: 1701 tcccgggtctacccgacgctcgcgctgggcaagaacgctcgccttcacgtcttcaacaac 1760
Query: 1744 gggagggcgcacgtcaaggtgtcccgtctcaccgcgtgggagatgaagaagccgg 1798
|| | || | || |||||||||| ||||| ||||||||||||||||||||||
Sbjct: 1761 ggcaaggtggacatcaaggtgtcggagctcacggcgtgggagatgaagaagccgg 1815
Score = 149 bits (75), Expect = 4e-034
Identities = 105/115 (91%)
Strand = Plus / Plus
Query: 695 cccgcggcgtggcgtacgtgtaccgcagccgcgacttccggcggtggaggcgggtgcggc 754
||||||||||||||||||||||||| |||||||||||| |||||||| ||||||| ||
Sbjct: 697 cccgcggcgtggcgtacgtgtaccggagccgcgacttcatgcggtggacgcgggtgagga 756
Query: 755 ggccgctgcactcggcgcccacggggatgtgggagtgccccgacttctacccggt 809
||||||||||||||||||||||||||||||||||||||| ||| | ||||||||
Sbjct: 757 agccgctgcactcggcgcccacggggatgtgggagtgcccggacctgtacccggt 811
Score = 58.0 bits (29), Expect = 1e-006
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 80 tgctgctgttgcagctcgcaggagcgtcgcatgtcgtctac 120
|||||||| |||||||||| || ||||||||||||||||||
Sbjct: 99 tgctgctgctgcagctcgccggggcgtcgcatgtcgtctac 139
Score = 54.0 bits (27), Expect = 2e-005
Identities = 120/151 (79%)
Strand = Plus / Plus
Query: 1343 tggacccggcgctggcctacgacgcggagaggctgtgcggcgtgaagcgcgcggacgtga 1402
||||||||||||| ||| ||||||| ||| ||||||| || ||| | | || |||||
Sbjct: 1345 tggacccggcgctagccaacgacgcccagaagctgtgcagcatgaggggtgcccacgtgg 1404
Query: 1403 ggggcggcgtggggccgttcgggctgtgggtgctggcctccgccaaccgcaaggagagaa 1462
||||||||||| || ||||| ||||||||||| ||||| |||| | |||||| |
Sbjct: 1405 aaggcggcgtgggccccttcggcctgtgggtgctcgcctcgtccaagctggaggagaaga 1464
Query: 1463 ccgcggtgttcttcagggtgttcaagcccgc 1493
| ||||| |||||| ||||||||||| ||||
Sbjct: 1465 cggcggtcttcttccgggtgttcaaggccgc 1495
>gb|BU994370.1|BU994370 HM06N08r HM Hordeum vulgare subsp. vulgare cDNA clone HM06N08
5-PRIME, mRNA sequence
Length = 590
Score = 349 bits (176), Expect = 2e-094
Identities = 367/430 (85%), Gaps = 3/430 (0%)
Strand = Plus / Plus
Query: 885 gaacagcctcgacctccggcggtacgactactacaccgtgggcacgtaccacccgagggc 944
||||||||||||||| || || ||||||||||||||||| ||||| ||| ||| | | |
Sbjct: 11 gaacagcctcgacctgcgccgctacgactactacaccgtcggcacctacgaccgcaagac 70
Query: 945 cgagcggtacgtgccggacgaccccgccggcgacgagcaccgcctgcgctacgactacgg 1004
|||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||
Sbjct: 71 ggagcggtacgtgccggacaaccccgccggcgacgagcaccacctgcgctacgactacgg 130
Query: 1005 caacttctacgcgtccaagacgttctacgacccggccaagcggcgccgcatcctgtgggg 1064
|||||||||||| |||||||| ||||||||||||| |||||| ||||||||||| |||||
Sbjct: 131 caacttctacgcctccaagaccttctacgacccggtcaagcgccgccgcatcctctgggg 190
Query: 1065 ctgggctaacgagtccgacaccgccgccgacgatgtggccaaaggctgggctggaatcca 1124
|||||| |||||||||||| |||||| |||||| || ||||| || ||||| ||||||||
Sbjct: 191 ctgggccaacgagtccgacgccgccgtcgacgacgtcgccaagggatgggccggaatcca 250
Query: 1125 ggccattccaaggacggtgtggctggaccccagcgggaagcagctgttgcagtggcctat 1184
||| ||||| || | ||| ||||||||||| || |||| ||||||| |||||||||| |
Sbjct: 251 ggcgattccgagaaaggtttggctggacccgagtgggaggcagctgatgcagtggcccgt 310
Query: 1185 cgaggaggtggaggcgctgagag---caaagtcggtcactctcaagaacagggtaatcaa 1241
|||||| | ||||||||||| | || | |||||| ||||||||||||| ||||
Sbjct: 311 ggaggagcttgaggcgctgagggggaaaaggccggtcagcatcaagaacagggtggtcaa 370
Query: 1242 ggcaggacatcacgtcgaggtgaccgggatacagacggcacaggctgacgtggaggtgag 1301
| ||| | ||||||||||| |||||| ||| ||| ||||||||||||||||||||||
Sbjct: 371 gcggggagagcacgtcgaggtcaccgggctacggacctcacaggctgacgtggaggtgag 430
Query: 1302 cttcgaggtg 1311
||| ||||||
Sbjct: 431 ctttgaggtg 440
Score = 42.1 bits (21), Expect = 0.071
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 1406 gcggcgtggggccgttcgggctgtgggtgctggcctc 1442
|||||||||| || ||||| ||||||||||| |||||
Sbjct: 525 gcggcgtgggccccttcggcctgtgggtgctcgcctc 561
>gb|BF625535.2|BF625535 HVSMEa0011C02f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0011C02f, mRNA sequence
Length = 641
Score = 190 bits (96), Expect = 1e-046
Identities = 168/192 (87%)
Strand = Plus / Plus
Query: 186 ccccctgctcaggacggggtaccacttccagccccccaagaactggatcaatgatcccaa 245
|||||||||| ||||||| ||||||||||| ||||||| |||||||||||| ||||| ||
Sbjct: 158 ccccctgctccggacgggctaccacttccaaccccccatgaactggatcaacgatccaaa 217
Query: 246 cgcgcccatgtactacaaggggtggtaccatttcttctaccaatacaatcccaagggcgc 305
| ||| | ||||||||||| |||||||| || |||||||| ||||| |||||||||||
Sbjct: 218 tgggccgctctactacaagggatggtaccacttgttctaccagtacaaccccaagggcgc 277
Query: 306 cgtatggggcaacatcgtgtgggcgcactcggtgtcgcgagacctcatcaactgggtggc 365
|| |||||||||||| | ||||||||||||||||| || ||||||||||||||| ||||
Sbjct: 278 ggtgtggggcaacatcatctgggcgcactcggtgtcccgcgacctcatcaactggatggc 337
Query: 366 gctagagccggc 377
||| ||||||||
Sbjct: 338 gctggagccggc 349
Score = 95.6 bits (48), Expect = 5e-018
Identities = 126/152 (82%)
Strand = Plus / Plus
Query: 478 gaccacccggacatcaactaccaggtccagaacgtggcgtacccgaagaacgtgtcggac 537
|||| ||||| || |||||||||| |||||||| | || | ||| ||| || ||||||
Sbjct: 447 gaccgcccgggcaccaactaccagatccagaacatcgccttccccaaggacccctcggac 506
Query: 538 ccgctgctccgggagtgggtgaagccctcgcacaaccccgtcatcgtccccgagggcggc 597
|||||||||||||||||||| |||||| | |||||||| || ||| || |||| ||||
Sbjct: 507 ccgctgctccgggagtgggtcaagcccgggtacaaccccatcgccgtgccggaggccggc 566
Query: 598 atcaacgcgacgcagttccgcgacccgaccac 629
|| ||||| || ||||||||||||||||||||
Sbjct: 567 atgaacgccacccagttccgcgacccgaccac 598
>gb|BE559434.1|BE559434 HV_CEb0024K20f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0024K20f, mRNA sequence
Length = 513
Score = 190 bits (96), Expect = 1e-046
Identities = 168/192 (87%)
Strand = Plus / Plus
Query: 186 ccccctgctcaggacggggtaccacttccagccccccaagaactggatcaatgatcccaa 245
|||||||||| ||||||| ||||||||||| ||||||| |||||||||||| ||||| ||
Sbjct: 210 ccccctgctccggacgggctaccacttccaaccccccatgaactggatcaacgatccaaa 269
Query: 246 cgcgcccatgtactacaaggggtggtaccatttcttctaccaatacaatcccaagggcgc 305
| ||| | ||||||||||| |||||||| || |||||||| ||||| |||||||||||
Sbjct: 270 tgggccgctctactacaagggatggtaccacttgttctaccagtacaaccccaagggcgc 329
Query: 306 cgtatggggcaacatcgtgtgggcgcactcggtgtcgcgagacctcatcaactgggtggc 365
|| |||||||||||| | ||||||||||||||||| || ||||||||||||||| ||||
Sbjct: 330 ggtgtggggcaacatcatctgggcgcactcggtgtcccgcgacctcatcaactggatggc 389
Query: 366 gctagagccggc 377
||| ||||||||
Sbjct: 390 gctggagccggc 401
>gb|BF264866.2|BF264866 HV_CEa0010J14f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0010J14f, mRNA sequence
Length = 835
Score = 190 bits (96), Expect = 1e-046
Identities = 168/192 (87%)
Strand = Plus / Plus
Query: 186 ccccctgctcaggacggggtaccacttccagccccccaagaactggatcaatgatcccaa 245
|||||||||| ||||||| ||||||||||| ||||||| |||||||||||| ||||| ||
Sbjct: 70 ccccctgctccggacgggctaccacttccaaccccccatgaactggatcaacgatccaaa 129
Query: 246 cgcgcccatgtactacaaggggtggtaccatttcttctaccaatacaatcccaagggcgc 305
| ||| | ||||||||||| |||||||| || |||||||| ||||| |||||||||||
Sbjct: 130 tgggccgctctactacaagggatggtaccacttgttctaccagtacaaccccaagggcgc 189
Query: 306 cgtatggggcaacatcgtgtgggcgcactcggtgtcgcgagacctcatcaactgggtggc 365
|| |||||||||||| | ||||||||||||||||| || ||||||||||||||| ||||
Sbjct: 190 ggtgtggggcaacatcatctgggcgcactcggtgtcccgcgacctcatcaactggatggc 249
Query: 366 gctagagccggc 377
||| ||||||||
Sbjct: 250 gctggagccggc 261
Score = 103 bits (52), Expect = 2e-020
Identities = 133/160 (83%)
Strand = Plus / Plus
Query: 478 gaccacccggacatcaactaccaggtccagaacgtggcgtacccgaagaacgtgtcggac 537
|||| ||||| || |||||||||| |||||||| | || | ||| ||| || ||||||
Sbjct: 359 gaccgcccgggcaccaactaccagatccagaacatcgccttccccaaggacccctcggac 418
Query: 538 ccgctgctccgggagtgggtgaagccctcgcacaaccccgtcatcgtccccgagggcggc 597
|||||||||||||||||||| |||||| | |||||||| || ||| || |||| ||||
Sbjct: 419 ccgctgctccgggagtgggtcaagcccgggtacaaccccatcgccgtgccggaggccggc 478
Query: 598 atcaacgcgacgcagttccgcgacccgaccacggcctggc 637
|| ||||| || |||||||||||||||||||| |||||||
Sbjct: 479 atgaacgccacccagttccgcgacccgaccaccgcctggc 518
Score = 48.1 bits (24), Expect = 0.001
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 757 ccgctgcactcggcgcccacggggatgtgggagtgccccgactt 800
||||| |||||||||| || || ||||||||||||||||||||
Sbjct: 635 ccgctccactcggcgctgaccggcatgtgggagtgccccgactt 678
>gb|BE214358.2|BE214358 HV_CEb0003D11f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0003D11f, mRNA sequence
Length = 701
Score = 190 bits (96), Expect = 1e-046
Identities = 168/192 (87%)
Strand = Plus / Plus
Query: 186 ccccctgctcaggacggggtaccacttccagccccccaagaactggatcaatgatcccaa 245
|||||||||| ||||||| ||||||||||| ||||||| |||||||||||| ||||| ||
Sbjct: 198 ccccctgctccggacgggctaccacttccaaccccccatgaactggatcaacgatccaaa 257
Query: 246 cgcgcccatgtactacaaggggtggtaccatttcttctaccaatacaatcccaagggcgc 305
| ||| | ||||||||||| |||||||| || |||||||| ||||| |||||||||||
Sbjct: 258 tgggccgctctactacaagggatggtaccacttgttctaccagtacaaccccaagggcgc 317
Query: 306 cgtatggggcaacatcgtgtgggcgcactcggtgtcgcgagacctcatcaactgggtggc 365
|| |||||||||||| | ||||||||||||||||| || ||||||||||||||| ||||
Sbjct: 318 ggtgtggggcaacatcatctgggcgcactcggtgtcccgcgacctcatcaactggatggc 377
Query: 366 gctagagccggc 377
||| ||||||||
Sbjct: 378 gctggagccggc 389
Score = 71.9 bits (36), Expect = 8e-011
Identities = 123/152 (80%)
Strand = Plus / Plus
Query: 478 gaccacccggacatcaactaccaggtccagaacgtggcgtacccgaagaacgtgtcggac 537
|||| ||||| || |||||||||| |||||||| | || | ||| ||| || ||||||
Sbjct: 487 gaccgcccgggcaccaactaccagatccagaacatcgccttccccaaggacccctcggac 546
Query: 538 ccgctgctccgggagtgggtgaagccctcgcacaaccccgtcatcgtccccgagggcggc 597
|||||||||||||||||||| |||||| | |||||||| || ||| || |||| ||||
Sbjct: 547 ccgctgctccgggagtgggtcaagcccgggtacaaccccatcgccgtgccggaggccggc 606
Query: 598 atcaacgcgacgcagttccgcgacccgaccac 629
|| ||||| | || |||||||| ||||||||
Sbjct: 607 atgaacgccccccaattccgcgaaccgaccac 638
>gb|BI778225.2|BI778225 EBro07_SQ002_J10_R root, 3 week, reduced light, cv Optic, EBro07
Hordeum vulgare subsp. vulgare cDNA clone
EBro07_SQ002_J10 5', mRNA sequence
Length = 695
Score = 190 bits (96), Expect = 1e-046
Identities = 168/192 (87%)
Strand = Plus / Plus
Query: 186 ccccctgctcaggacggggtaccacttccagccccccaagaactggatcaatgatcccaa 245
|||||||||| ||||||| ||||||||||| ||||||| |||||||||||| ||||| ||
Sbjct: 96 ccccctgctccggacgggctaccacttccaaccccccatgaactggatcaacgatccaaa 155
Query: 246 cgcgcccatgtactacaaggggtggtaccatttcttctaccaatacaatcccaagggcgc 305
| ||| | ||||||||||| |||||||| || |||||||| ||||| |||||||||||
Sbjct: 156 tgggccgctctactacaagggatggtaccacttgttctaccagtacaaccccaagggcgc 215
Query: 306 cgtatggggcaacatcgtgtgggcgcactcggtgtcgcgagacctcatcaactgggtggc 365
|| |||||||||||| | ||||||||||||||||| || ||||||||||||||| ||||
Sbjct: 216 ggtgtggggcaacatcatctgggcgcactcggtgtcccgcgacctcatcaactggatggc 275
Query: 366 gctagagccggc 377
||| ||||||||
Sbjct: 276 gctggagccggc 287
Score = 103 bits (52), Expect = 2e-020
Identities = 133/160 (83%)
Strand = Plus / Plus
Query: 478 gaccacccggacatcaactaccaggtccagaacgtggcgtacccgaagaacgtgtcggac 537
|||| ||||| || |||||||||| |||||||| | || | ||| ||| || ||||||
Sbjct: 385 gaccgcccgggcaccaactaccagatccagaacatcgccttccccaaggacccctcggac 444
Query: 538 ccgctgctccgggagtgggtgaagccctcgcacaaccccgtcatcgtccccgagggcggc 597
|||||||||||||||||||| |||||| | |||||||| || ||| || |||| ||||
Sbjct: 445 ccgctgctccgggagtgggtcaagcccgggtacaaccccatcgccgtgccggaggccggc 504
Query: 598 atcaacgcgacgcagttccgcgacccgaccacggcctggc 637
|| ||||| || |||||||||||||||||||| |||||||
Sbjct: 505 atgaacgccacccagttccgcgacccgaccaccgcctggc 544
>gb|BQ468711.1|BQ468711 HM02B12r HM Hordeum vulgare subsp. vulgare cDNA clone HM02B12
5-PRIME, mRNA sequence
Length = 528
Score = 188 bits (95), Expect = 5e-046
Identities = 245/295 (83%)
Strand = Plus / Plus
Query: 1504 aagcccgtggtgctcatgtgcaccgaccctaccaagtcgtcccagaacccgaacctgtac 1563
|||||||| || ||||||||| |||| || |||| ||| || | |||||||||||| |||
Sbjct: 27 aagcccgtcgtcctcatgtgctccgatccaaccatgtcatctctgaacccgaacctatac 86
Query: 1564 cgcccgacatttgcaggatttgtcgacacggacatctcgaacggcaagatatccctgaga 1623
||||| || ||||| ||||| ||||| ||||| | || ||||||||||| ||||||
Sbjct: 87 aagccgaccttcgcaggctttgttgacactgacatagccaagggcaagatatctctgaga 146
Query: 1624 agcctgatcgaccgatcggtcgttgagagcttcggagccgggggcaagacctgcatcctc 1683
||||||||||| || || ||||| ||||||||||| || ||||||| |||||||||||||
Sbjct: 147 agcctgatcgatcggtccgtcgtggagagcttcggggcagggggcaggacctgcatcctc 206
Query: 1684 tccagggtctacccgtcgctggccatcggcaaggacgctcgcctctacgtgttcaacaac 1743
||| ||||||||||| |||| || | |||||| |||||||||| |||| |||||||||
Sbjct: 207 tcccgggtctacccgacgctcgcgctgggcaagaacgctcgccttcacgtcttcaacaac 266
Query: 1744 gggagggcgcacgtcaaggtgtcccgtctcaccgcgtgggagatgaagaagccgg 1798
|| | || | || |||||||||| ||||| ||||||||||||||||||||||
Sbjct: 267 ggcaaggtggacatcaaggtgtcggagctcacggcgtgggagatgaagaagccgg 321
>gb|BQ468801.1|BQ468801 HM02G04r HM Hordeum vulgare subsp. vulgare cDNA clone HM02G04
5-PRIME, mRNA sequence
Length = 502
Score = 168 bits (85), Expect = 5e-040
Identities = 127/141 (90%)
Strand = Plus / Plus
Query: 857 ccggcccaagggtgaagcacgtgctcaagaacagcctcgacctccggcggtacgactact 916
||||||| ||||||||||||||||||||||||||||||||||| || || ||||||||||
Sbjct: 362 ccggccccagggtgaagcacgtgctcaagaacagcctcgacctgcgccgctacgactact 421
Query: 917 acaccgtgggcacgtaccacccgagggccgagcggtacgtgccggacgaccccgccggcg 976
||||||| ||||| ||| ||| | | | |||||||||||||||||| ||||||||||||
Sbjct: 422 acaccgtcggcacctacgaccgcaagacggagcggtacgtgccggacaaccccgccggcg 481
Query: 977 acgagcaccgcctgcgctacg 997
||||||||| |||||||||||
Sbjct: 482 acgagcaccacctgcgctacg 502
Score = 149 bits (75), Expect = 4e-034
Identities = 105/115 (91%)
Strand = Plus / Plus
Query: 695 cccgcggcgtggcgtacgtgtaccgcagccgcgacttccggcggtggaggcgggtgcggc 754
||||||||||||||||||||||||| |||||||||||| |||||||| ||||||| ||
Sbjct: 197 cccgcggcgtggcgtacgtgtaccggagccgcgacttcatgcggtggacgcgggtgagga 256
Query: 755 ggccgctgcactcggcgcccacggggatgtgggagtgccccgacttctacccggt 809
||||||||||||||||||||||||||||||||||||||| ||| | ||||||||
Sbjct: 257 agccgctgcactcggcgcccacggggatgtgggagtgcccggacctgtacccggt 311
Score = 91.7 bits (46), Expect = 9e-017
Identities = 88/102 (86%)
Strand = Plus / Plus
Query: 531 gtcggacccgctgctccgggagtgggtgaagccctcgcacaaccccgtcatcgtccccga 590
|||||||||||||||||| |||||||||||||| | |||||| ||||||| || ||
Sbjct: 42 gtcggacccgctgctccgcgagtgggtgaagccgcggggcaacccgatcatcgtgccgga 101
Query: 591 gggcggcatcaacgcgacgcagttccgcgacccgaccacggc 632
||||||||||||||| || |||||||| |||||||| |||||
Sbjct: 102 gggcggcatcaacgccacccagttccgggacccgacgacggc 143
>gb|BU973477.1|BU973477 HB25B07r BC Hordeum vulgare subsp. vulgare cDNA clone HB25B07
5-PRIME, mRNA sequence
Length = 477
Score = 168 bits (85), Expect = 5e-040
Identities = 235/285 (82%)
Strand = Plus / Plus
Query: 1504 aagcccgtggtgctcatgtgcaccgaccctaccaagtcgtcccagaacccgaacctgtac 1563
|||||||| || ||||||||| |||| || |||| ||| || | |||||||||||| |||
Sbjct: 193 aagcccgtcgtcctcatgtgctccgatccaaccatgtcatctctgaacccgaacctatac 252
Query: 1564 cgcccgacatttgcaggatttgtcgacacggacatctcgaacggcaagatatccctgaga 1623
||||| || ||||| ||||| ||||| ||||| | || ||||||||||| ||||||
Sbjct: 253 aagccgaccttcgcaggctttgttgacactgacatagccaagggcaagatatctctgaga 312
Query: 1624 agcctgatcgaccgatcggtcgttgagagcttcggagccgggggcaagacctgcatcctc 1683
||||||||||| || || ||||| ||||||||||| || ||||||| |||||||||||||
Sbjct: 313 agcctgatcgatcggtccgtcgtggagagcttcggggcagggggcaggacctgcatcctc 372
Query: 1684 tccagggtctacccgtcgctggccatcggcaaggacgctcgcctctacgtgttcaacaac 1743
||| ||||||||||| |||| || | |||||| |||||||||| |||| |||||||||
Sbjct: 373 tcccgggtctacccgacgctcgcgctgggcaagaacgctcgccttcacgtcttcaacaac 432
Query: 1744 gggagggcgcacgtcaaggtgtcccgtctcaccgcgtgggagatg 1788
|| | || | || |||||||||| ||||| ||||||||||||
Sbjct: 433 ggcaaggtggacatcaaggtgtcggagctcacggcgtgggagatg 477
Score = 54.0 bits (27), Expect = 2e-005
Identities = 120/151 (79%)
Strand = Plus / Plus
Query: 1343 tggacccggcgctggcctacgacgcggagaggctgtgcggcgtgaagcgcgcggacgtga 1402
||||||||||||| ||| ||||||| ||| ||||||| || ||| | | || |||||
Sbjct: 17 tggacccggcgctagccaacgacgcccagaagctgtgcagcatgaggggtgcccacgtgg 76
Query: 1403 ggggcggcgtggggccgttcgggctgtgggtgctggcctccgccaaccgcaaggagagaa 1462
||||||||||| || ||||| ||||||||||| ||||| |||| | |||||| |
Sbjct: 77 aaggcggcgtgggccccttcggcctgtgggtgctcgcctcgtccaagctggaggagaaga 136
Query: 1463 ccgcggtgttcttcagggtgttcaagcccgc 1493
| ||||| |||||| ||||||||||| ||||
Sbjct: 137 cggcggtcttcttccgggtgttcaaggccgc 167
>gb|BU996678.1|BU996678 HM14G07r HM Hordeum vulgare subsp. vulgare cDNA clone HM14G07
5-PRIME, mRNA sequence
Length = 540
Score = 165 bits (83), Expect = 7e-039
Identities = 218/263 (82%)
Strand = Plus / Plus
Query: 1504 aagcccgtggtgctcatgtgcaccgaccctaccaagtcgtcccagaacccgaacctgtac 1563
|||||||| || ||||||||| |||| || |||| ||| || | |||||||||||| |||
Sbjct: 271 aagcccgtcgtcctcatgtgctccgatccaaccatgtcatctctgaacccgaacctatac 330
Query: 1564 cgcccgacatttgcaggatttgtcgacacggacatctcgaacggcaagatatccctgaga 1623
||||| || ||||| ||||| ||||| ||||| | || ||||||||||| ||||||
Sbjct: 331 aagccgaccttcgcaggctttgttgacactgacatagccaagggcaagatatctctgaga 390
Query: 1624 agcctgatcgaccgatcggtcgttgagagcttcggagccgggggcaagacctgcatcctc 1683
||||||||||| || || ||||| ||||||||||| || ||||||| |||||||||||||
Sbjct: 391 agcctgatcgatcggtccgtcgtggagagcttcggggcagggggcaggacctgcatcctc 450
Query: 1684 tccagggtctacccgtcgctggccatcggcaaggacgctcgcctctacgtgttcaacaac 1743
||| ||||||||||| |||| || | |||||| |||||||||| |||| |||||||||
Sbjct: 451 tcccgggtctacccgacgctcgcgctgggcaagaacgctcgccttcacgtcttcaacaac 510
Query: 1744 gggagggcgcacgtcaaggtgtc 1766
|| | || | || ||||||||||
Sbjct: 511 ggcaaggtggacatcaaggtgtc 533
Score = 56.0 bits (28), Expect = 5e-006
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 1280 cacaggctgacgtggaggtgagcttcgaggtg 1311
||||||||||||||||||||||||| ||||||
Sbjct: 38 cacaggctgacgtggaggtgagctttgaggtg 69
Score = 54.0 bits (27), Expect = 2e-005
Identities = 120/151 (79%)
Strand = Plus / Plus
Query: 1343 tggacccggcgctggcctacgacgcggagaggctgtgcggcgtgaagcgcgcggacgtga 1402
||||||||||||| ||| ||||||| ||| ||||||| || ||| | | || |||||
Sbjct: 95 tggacccggcgctagccaacgacgcccagaagctgtgcagcatgaggggtgcccacgtgg 154
Query: 1403 ggggcggcgtggggccgttcgggctgtgggtgctggcctccgccaaccgcaaggagagaa 1462
||||||||||| || ||||| ||||||||||| ||||| |||| | |||||| |
Sbjct: 155 aaggcggcgtgggccccttcggcctgtgggtgctcgcctcgtccaagctggaggagaaga 214
Query: 1463 ccgcggtgttcttcagggtgttcaagcccgc 1493
| ||||| |||||| ||||||||||| ||||
Sbjct: 215 cggcggtcttcttccgggtgttcaaggccgc 245
>gb|BU996531.1|BU996531 HM13O15r HM Hordeum vulgare subsp. vulgare cDNA clone HM13O15
5-PRIME, mRNA sequence
Length = 481
Score = 161 bits (81), Expect = 1e-037
Identities = 165/193 (85%)
Strand = Plus / Plus
Query: 1606 ggcaagatatccctgagaagcctgatcgaccgatcggtcgttgagagcttcggagccggg 1665
||||||||||| ||||||||||||||||| || || ||||| ||||||||||| || |||
Sbjct: 10 ggcaagatatctctgagaagcctgatcgatcggtccgtcgtggagagcttcggggcaggg 69
Query: 1666 ggcaagacctgcatcctctccagggtctacccgtcgctggccatcggcaaggacgctcgc 1725
|||| |||||||||||||||| ||||||||||| |||| || | |||||| ||||||||
Sbjct: 70 ggcaggacctgcatcctctcccgggtctacccgacgctcgcgctgggcaagaacgctcgc 129
Query: 1726 ctctacgtgttcaacaacgggagggcgcacgtcaaggtgtcccgtctcaccgcgtgggag 1785
|| |||| ||||||||||| | || | || |||||||||| ||||| |||||||||
Sbjct: 130 cttcacgtcttcaacaacggcaaggtggacatcaaggtgtcggagctcacggcgtgggag 189
Query: 1786 atgaagaagccgg 1798
|||||||||||||
Sbjct: 190 atgaagaagccgg 202
>gb|BQ764136.1|BQ764136 EBro03_SQ006_J10_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ006_J10 5', mRNA sequence
Length = 725
Score = 155 bits (78), Expect = 7e-036
Identities = 245/300 (81%), Gaps = 3/300 (1%)
Strand = Plus / Plus
Query: 885 gaacagcctcgacctccggcggtacgactactacaccgtgggcacgtaccacccgagggc 944
|||||||||||||||| || ||||||||||||||||||||||| ||| || ||| |
Sbjct: 1 gaacagcctcgacctcacccgctacgactactacaccgtgggcacctacaacaacaggac 60
Query: 945 cgagcggtacgtgccggacgaccccgccggcgacg---agcaccgcctgcgctacgacta 1001
||||||||||| || ||| ||||| ||||||||| | || || || | ||||||||
Sbjct: 61 ggagcggtacgtccccgacaaccccaccggcgacgtctaccagcggctccagtacgacta 120
Query: 1002 cggcaacttctacgcgtccaagacgttctacgacccggccaagcggcgccgcatcctgtg 1061
|||||||||||||||||||||||| |||||||||||||||||| |||||| | |||
Sbjct: 121 cggcaacttctacgcgtccaagaccttctacgacccggccaagaaccgccgcgtgctgct 180
Query: 1062 gggctgggctaacgagtccgacaccgccgccgacgatgtggccaaaggctgggctggaat 1121
|||||||| ||||||||||||| || |||| |||| |||||||| ||||| || ||
Sbjct: 181 cggctgggccaacgagtccgacagcgtcgcccacgacaacgccaaaggatgggccggcat 240
Query: 1122 ccaggccattccaaggacggtgtggctggaccccagcgggaagcagctgttgcagtggcc 1181
||| || || || |||| | | |||||||| || ||||| ||||||||| ||||||||||
Sbjct: 241 ccacgcaatcccgaggaagatatggctggatccgagcggcaagcagctgctgcagtggcc 300
Score = 52.0 bits (26), Expect = 7e-005
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1286 ctgacgtggaggtgagcttcgaggtg 1311
||||||||||||||||||||||||||
Sbjct: 405 ctgacgtggaggtgagcttcgaggtg 430
>gb|BQ762965.1|BQ762965 EBro02_SQ006_O16_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ006_O16 5', mRNA sequence
Length = 557
Score = 123 bits (62), Expect = 2e-026
Identities = 155/186 (83%)
Strand = Plus / Plus
Query: 996 cgactacggcaacttctacgcgtccaagacgttctacgacccggccaagcggcgccgcat 1055
|||||||||||||||||||||||||||||| |||||||||||||||||| |||||| |
Sbjct: 1 cgactacggcaacttctacgcgtccaagaccttctacgacccggccaagaaccgccgcgt 60
Query: 1056 cctgtggggctgggctaacgagtccgacaccgccgccgacgatgtggccaaaggctgggc 1115
||| |||||||| ||||||||||||| || |||| |||| |||||||| |||||
Sbjct: 61 gctgctcggctgggccaacgagtccgacagcgtcgcccacgacaacgccaaaggatgggc 120
Query: 1116 tggaatccaggccattccaaggacggtgtggctggaccccagcgggaagcagctgttgca 1175
|| ||||| || || || |||| | | |||||||| || ||||| ||||||||| ||||
Sbjct: 121 cggcatccacgcaatcccgaggaagatatggctggatccgagcggcaagcagctgctgca 180
Query: 1176 gtggcc 1181
||||||
Sbjct: 181 gtggcc 186
Score = 52.0 bits (26), Expect = 7e-005
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1286 ctgacgtggaggtgagcttcgaggtg 1311
||||||||||||||||||||||||||
Sbjct: 291 ctgacgtggaggtgagcttcgaggtg 316
>gb|AL503000.1|AL503000 AL503000 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW09G14u 3', mRNA sequence
Length = 595
Score = 119 bits (60), Expect = 4e-025
Identities = 156/188 (82%)
Strand = Plus / Minus
Query: 1609 aagatatccctgagaagcctgatcgaccgatcggtcgttgagagcttcggagccgggggc 1668
||||| ||| |||||||| |||||||||| || || |||||||||||||| ||||| ||
Sbjct: 461 aagatctccttgagaagcttgatcgaccgttccgtggttgagagcttcggcgccggaggg 402
Query: 1669 aagacctgcatcctctccagggtctacccgtcgctggccatcggcaaggacgctcgcctc 1728
||||||||||||||||| || || |||||||| |||| ||||| || ||||| | |||
Sbjct: 401 aagacctgcatcctctcgagagtgtacccgtccatggcgatcgggaaagacgcgcatctc 342
Query: 1729 tacgtgttcaacaacgggagggcgcacgtcaaggtgtcccgtctcaccgcgtgggagatg 1788
|||||||||||||| ||| | || | ||||||| |||| |||| ||||||||||||
Sbjct: 341 tacgtgttcaacaatggggagacggatatcaaggtatcccaactcaaggcgtgggagatg 282
Query: 1789 aagaagcc 1796
||||||||
Sbjct: 281 aagaagcc 274
>gb|AL505748.1|AL505748 AL505748 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW09G14V 5', mRNA sequence
Length = 465
Score = 119 bits (60), Expect = 4e-025
Identities = 156/188 (82%)
Strand = Plus / Plus
Query: 994 tacgactacggcaacttctacgcgtccaagacgttctacgacccggccaagcggcgccgc 1053
|||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||
Sbjct: 13 tacgactacggcaacttctacgcgtccaagaccttctacgacccggccaagaaccgccgc 72
Query: 1054 atcctgtggggctgggctaacgagtccgacaccgccgccgacgatgtggccaaaggctgg 1113
| ||| |||||||| ||||||||||||| || |||| |||| ||||| || |||
Sbjct: 73 gtgctgctcggctgggccaacgagtccgacagcgtcgcccacgacaacgccaagggatgg 132
Query: 1114 gctggaatccaggccattccaaggacggtgtggctggaccccagcgggaagcagctgttg 1173
|| || ||||| || || || |||| | | |||||||| || ||||| ||||||||| ||
Sbjct: 133 gccggcatccacgcaatcccgaggaagatatggctggatccgagcggcaagcagctgctg 192
Query: 1174 cagtggcc 1181
||||||||
Sbjct: 193 cagtggcc 200
Score = 52.0 bits (26), Expect = 7e-005
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1286 ctgacgtggaggtgagcttcgaggtg 1311
||||||||||||||||||||||||||
Sbjct: 305 ctgacgtggaggtgagcttcgaggtg 330
>gb|BF267660.3|BF267660 HV_CEa0018I16f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0018I16f, mRNA sequence
Length = 519
Score = 119 bits (60), Expect = 4e-025
Identities = 156/188 (82%)
Strand = Plus / Plus
Query: 994 tacgactacggcaacttctacgcgtccaagacgttctacgacccggccaagcggcgccgc 1053
|||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||
Sbjct: 48 tacgactacggcaacttctacgcgtccaagaccttctacgacccggccaagaaccgccgc 107
Query: 1054 atcctgtggggctgggctaacgagtccgacaccgccgccgacgatgtggccaaaggctgg 1113
| ||| |||||||| ||||||||||||| || |||| |||| ||||| || |||
Sbjct: 108 gtgctgctcggctgggccaacgagtccgacagcgtcgcccacgacaacgccaagggatgg 167
Query: 1114 gctggaatccaggccattccaaggacggtgtggctggaccccagcgggaagcagctgttg 1173
|| || ||||| || || || |||| | | |||||||| || ||||| ||||||||| ||
Sbjct: 168 gccggcatccacgcaatcccgaggaagatatggctggatccgagcggcaagcagctgctg 227
Query: 1174 cagtggcc 1181
||||||||
Sbjct: 228 cagtggcc 235
Score = 44.1 bits (22), Expect = 0.018
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1286 ctgacgtggaggtgagcttcgaggtg 1311
|||||||||| |||||||||||||||
Sbjct: 340 ctgacgtggaagtgagcttcgaggtg 365
>gb|BF064963.3|BF064963 HV_CEb0022D03f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0022D03f, mRNA sequence
Length = 690
Score = 119 bits (60), Expect = 4e-025
Identities = 156/188 (82%)
Strand = Plus / Plus
Query: 1609 aagatatccctgagaagcctgatcgaccgatcggtcgttgagagcttcggagccgggggc 1668
||||| ||| |||||||| |||||||||| || || |||||||||||||| ||||| ||
Sbjct: 226 aagatctccttgagaagcttgatcgaccgttccgtggttgagagcttcggcgccggaggg 285
Query: 1669 aagacctgcatcctctccagggtctacccgtcgctggccatcggcaaggacgctcgcctc 1728
||||||||||||||||| || || |||||||| |||| ||||| || ||||| | |||
Sbjct: 286 aagacctgcatcctctcgagagtgtacccgtccatggcgatcgggaaagacgcgcatctc 345
Query: 1729 tacgtgttcaacaacgggagggcgcacgtcaaggtgtcccgtctcaccgcgtgggagatg 1788
|||||||||||||| ||| | || | ||||||| |||| |||| ||||||||||||
Sbjct: 346 tacgtgttcaacaatggggagacggatatcaaggtatcccaactcaaggcgtgggagatg 405
Query: 1789 aagaagcc 1796
||||||||
Sbjct: 406 aagaagcc 413
>gb|AV924971.1|AV924971 AV924971 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp. vulgare
cDNA clone basd17l01 5', mRNA sequence
Length = 577
Score = 119 bits (60), Expect = 4e-025
Identities = 156/188 (82%)
Strand = Plus / Plus
Query: 994 tacgactacggcaacttctacgcgtccaagacgttctacgacccggccaagcggcgccgc 1053
|||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||
Sbjct: 50 tacgactacggcaacttctacgcgtccaagaccttctacgacccggccaagaaccgccgc 109
Query: 1054 atcctgtggggctgggctaacgagtccgacaccgccgccgacgatgtggccaaaggctgg 1113
| ||| |||||||| ||||||||||||| || |||| |||| ||||| || |||
Sbjct: 110 gtgctgctcggctgggccaacgagtccgacagcgtcgcccacgacaacgccaagggatgg 169
Query: 1114 gctggaatccaggccattccaaggacggtgtggctggaccccagcgggaagcagctgttg 1173
|| || ||||| || || || |||| | | |||||||| || ||||| ||||||||| ||
Sbjct: 170 gccggcatccacgcaatcccgaggaagatatggctggatccgagcggcaagcagctgctg 229
Query: 1174 cagtggcc 1181
||||||||
Sbjct: 230 cagtggcc 237
Score = 52.0 bits (26), Expect = 7e-005
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1286 ctgacgtggaggtgagcttcgaggtg 1311
||||||||||||||||||||||||||
Sbjct: 342 ctgacgtggaggtgagcttcgaggtg 367
>gb|AV924972.1|AV924972 AV924972 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp. vulgare
cDNA clone basd17l02 5', mRNA sequence
Length = 549
Score = 119 bits (60), Expect = 4e-025
Identities = 156/188 (82%)
Strand = Plus / Plus
Query: 994 tacgactacggcaacttctacgcgtccaagacgttctacgacccggccaagcggcgccgc 1053
|||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||
Sbjct: 89 tacgactacggcaacttctacgcgtccaagaccttctacgacccggccaagaaccgccgc 148
Query: 1054 atcctgtggggctgggctaacgagtccgacaccgccgccgacgatgtggccaaaggctgg 1113
| ||| |||||||| ||||||||||||| || |||| |||| ||||| || |||
Sbjct: 149 gtgctgctcggctgggccaacgagtccgacagcgtcgcccacgacaacgccaagggatgg 208
Query: 1114 gctggaatccaggccattccaaggacggtgtggctggaccccagcgggaagcagctgttg 1173
|| || ||||| || || || |||| | | |||||||| || ||||| ||||||||| ||
Sbjct: 209 gccggcatccacgcaatcccgaggaagatatggctggatccgagcggcaagcagctgctg 268
Query: 1174 cagtggcc 1181
||||||||
Sbjct: 269 cagtggcc 276
Score = 52.0 bits (26), Expect = 7e-005
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1286 ctgacgtggaggtgagcttcgaggtg 1311
||||||||||||||||||||||||||
Sbjct: 381 ctgacgtggaggtgagcttcgaggtg 406
>gb|AV930059.1|AV930059 AV930059 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp. vulgare
cDNA clone basd17l01 3', mRNA sequence
Length = 502
Score = 119 bits (60), Expect = 4e-025
Identities = 156/188 (82%)
Strand = Plus / Minus
Query: 1609 aagatatccctgagaagcctgatcgaccgatcggtcgttgagagcttcggagccgggggc 1668
||||| ||| |||||||| |||||||||| || || |||||||||||||| ||||| ||
Sbjct: 430 aagatctccttgagaagcttgatcgaccgttccgtggttgagagcttcggcgccggaggg 371
Query: 1669 aagacctgcatcctctccagggtctacccgtcgctggccatcggcaaggacgctcgcctc 1728
||||||||||||||||| || || |||||||| |||| ||||| || ||||| | |||
Sbjct: 370 aagacctgcatcctctcgagagtgtacccgtccatggcgatcgggaaagacgcgcatctc 311
Query: 1729 tacgtgttcaacaacgggagggcgcacgtcaaggtgtcccgtctcaccgcgtgggagatg 1788
|||||||||||||| ||| | || | ||||||| |||| |||| ||||||||||||
Sbjct: 310 tacgtgttcaacaatggggagacggatatcaaggtatcccaactcaaggcgtgggagatg 251
Query: 1789 aagaagcc 1796
||||||||
Sbjct: 250 aagaagcc 243
>gb|AV930060.1|AV930060 AV930060 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp. vulgare
cDNA clone basd17l02 3', mRNA sequence
Length = 425
Score = 119 bits (60), Expect = 4e-025
Identities = 156/188 (82%)
Strand = Plus / Minus
Query: 1609 aagatatccctgagaagcctgatcgaccgatcggtcgttgagagcttcggagccgggggc 1668
||||| ||| |||||||| |||||||||| || || |||||||||||||| ||||| ||
Sbjct: 405 aagatctccttgagaagcttgatcgaccgttccgtggttgagagcttcggcgccggaggg 346
Query: 1669 aagacctgcatcctctccagggtctacccgtcgctggccatcggcaaggacgctcgcctc 1728
||||||||||||||||| || || |||||||| |||| ||||| || ||||| | |||
Sbjct: 345 aagacctgcatcctctcgagagtgtacccgtccatggcgatcgggaaagacgcgcatctc 286
Query: 1729 tacgtgttcaacaacgggagggcgcacgtcaaggtgtcccgtctcaccgcgtgggagatg 1788
|||||||||||||| ||| | || | ||||||| |||| |||| ||||||||||||
Sbjct: 285 tacgtgttcaacaatggggagacggatatcaaggtatcccaactcaaggcgtgggagatg 226
Query: 1789 aagaagcc 1796
||||||||
Sbjct: 225 aagaagcc 218
>gb|AJ434754.1|AJ434754 AJ434754 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200078A03F1, mRNA sequence
Length = 502
Score = 119 bits (60), Expect = 4e-025
Identities = 156/188 (82%)
Strand = Plus / Plus
Query: 1609 aagatatccctgagaagcctgatcgaccgatcggtcgttgagagcttcggagccgggggc 1668
||||| ||| |||||||| |||||||||| || || |||||||||||||| ||||| ||
Sbjct: 36 aagatctccttgagaagcttgatcgaccgttccgtggttgagagcttcggcgccggaggg 95
Query: 1669 aagacctgcatcctctccagggtctacccgtcgctggccatcggcaaggacgctcgcctc 1728
||||||||||||||||| || || |||||||| |||| ||||| || ||||| | |||
Sbjct: 96 aagacctgcatcctctcgagagtgtacccgtccatggcgatcgggaaagacgcgcatctc 155
Query: 1729 tacgtgttcaacaacgggagggcgcacgtcaaggtgtcccgtctcaccgcgtgggagatg 1788
|||||||||||||| ||| | || | ||||||| |||| |||| ||||||||||||
Sbjct: 156 tacgtgttcaacaatggggagacggatatcaaggtatcccaactcaaggcgtgggagatg 215
Query: 1789 aagaagcc 1796
||||||||
Sbjct: 216 aagaagcc 223
>gb|BJ449827.1|BJ449827 BJ449827 K. Sato unpublished cDNA library, cv. Akashinriki vegetative
stage leaves Hordeum vulgare subsp. vulgare cDNA clone
baak26o06 5', mRNA sequence
Length = 600
Score = 119 bits (60), Expect = 4e-025
Identities = 156/188 (82%)
Strand = Plus / Plus
Query: 1609 aagatatccctgagaagcctgatcgaccgatcggtcgttgagagcttcggagccgggggc 1668
||||| ||| |||||||| |||||||||| || || |||||||||||||| ||||| ||
Sbjct: 156 aagatctccttgagaagcttgatcgaccgttccgtggttgagagcttcggcgccggaggg 215
Query: 1669 aagacctgcatcctctccagggtctacccgtcgctggccatcggcaaggacgctcgcctc 1728
||||||||||||||||| || || |||||||| |||| ||||| || ||||| | |||
Sbjct: 216 aagacctgcatcctctcgagagtgtacccgtccatggcgatcgggaaagacgcgcatctc 275
Query: 1729 tacgtgttcaacaacgggagggcgcacgtcaaggtgtcccgtctcaccgcgtgggagatg 1788
|||||||||||||| ||| | || | ||||||| |||| |||| ||||||||||||
Sbjct: 276 tacgtgttcaacaatggggagacggatatcaaggtatcccaactcaaggcgtgggagatg 335
Query: 1789 aagaagcc 1796
||||||||
Sbjct: 336 aagaagcc 343
>gb|BJ457246.1|BJ457246 BJ457246 K. Sato unpublished cDNA library, cv. Akashinriki vegetative
stage leaves Hordeum vulgare subsp. vulgare cDNA clone
baak26o06 3', mRNA sequence
Length = 581
Score = 119 bits (60), Expect = 4e-025
Identities = 156/188 (82%)
Strand = Plus / Minus
Query: 1609 aagatatccctgagaagcctgatcgaccgatcggtcgttgagagcttcggagccgggggc 1668
||||| ||| |||||||| |||||||||| || || |||||||||||||| ||||| ||
Sbjct: 427 aagatctccttgagaagcttgatcgaccgttccgtggttgagagcttcggcgccggaggg 368
Query: 1669 aagacctgcatcctctccagggtctacccgtcgctggccatcggcaaggacgctcgcctc 1728
||||||||||||||||| || || |||||||| |||| ||||| || ||||| | |||
Sbjct: 367 aagacctgcatcctctcgagagtgtacccgtccatggcgatcgggaaagacgcgcatctc 308
Query: 1729 tacgtgttcaacaacgggagggcgcacgtcaaggtgtcccgtctcaccgcgtgggagatg 1788
|||||||||||||| ||| | || | ||||||| |||| |||| ||||||||||||
Sbjct: 307 tacgtgttcaacaatggggagacggatatcaaggtatcccaactcaaggcgtgggagatg 248
Query: 1789 aagaagcc 1796
||||||||
Sbjct: 247 aagaagcc 240
>gb|BJ467660.1|BJ467660 BJ467660 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags29e15 3', mRNA sequence
Length = 602
Score = 119 bits (60), Expect = 4e-025
Identities = 156/188 (82%)
Strand = Plus / Minus
Query: 1609 aagatatccctgagaagcctgatcgaccgatcggtcgttgagagcttcggagccgggggc 1668
||||| ||| |||||||| |||||||||| || || |||||||||||||| ||||| ||
Sbjct: 435 aagatctccttgagaagcttgatcgaccgttccgtggttgagagcttcggcgccggaggg 376
Query: 1669 aagacctgcatcctctccagggtctacccgtcgctggccatcggcaaggacgctcgcctc 1728
||||||||||||||||| || || |||||||| |||| ||||| || ||||| | |||
Sbjct: 375 aagacctgcatcctctcgagagtgtacccgtccatggcgatcgggaaagacgcgcatctc 316
Query: 1729 tacgtgttcaacaacgggagggcgcacgtcaaggtgtcccgtctcaccgcgtgggagatg 1788
|||||||||||||| ||| | || | ||||||| |||| |||| ||||||||||||
Sbjct: 315 tacgtgttcaacaatggggagacggatatcaaggtatcccaactcaaggcgtgggagatg 256
Query: 1789 aagaagcc 1796
||||||||
Sbjct: 255 aagaagcc 248
>gb|BQ760946.1|BQ760946 EBro03_SQ003_O23_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ003_O23 5', mRNA sequence
Length = 484
Score = 119 bits (60), Expect = 4e-025
Identities = 156/188 (82%)
Strand = Plus / Plus
Query: 1609 aagatatccctgagaagcctgatcgaccgatcggtcgttgagagcttcggagccgggggc 1668
||||| ||| |||||||| |||||||||| || || |||||||||||||| ||||| ||
Sbjct: 35 aagatctccttgagaagcttgatcgaccgttccgtggttgagagcttcggcgccggaggg 94
Query: 1669 aagacctgcatcctctccagggtctacccgtcgctggccatcggcaaggacgctcgcctc 1728
||||||||||||||||| || || |||||||| |||| ||||| || ||||| | |||
Sbjct: 95 aagacctgcatcctctcgagagtgtacccgtccatggcgatcgggaaagacgcgcatctc 154
Query: 1729 tacgtgttcaacaacgggagggcgcacgtcaaggtgtcccgtctcaccgcgtgggagatg 1788
|||||||||||||| ||| | || | ||||||| |||| |||| ||||||||||||
Sbjct: 155 tacgtgttcaacaatggggagacggatatcaaggtatcccaactcaaggcgtgggagatg 214
Query: 1789 aagaagcc 1796
||||||||
Sbjct: 215 aagaagcc 222
>gb|BF260173.2|BF260173 HVSMEf0021E20f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0021E20f, mRNA sequence
Length = 790
Score = 101 bits (51), Expect = 9e-020
Identities = 113/134 (84%)
Strand = Plus / Plus
Query: 1609 aagatatccctgagaagcctgatcgaccgatcggtcgttgagagcttcggagccgggggc 1668
||||| ||| |||||||| |||||||||| || || |||||||||||||| ||||| ||
Sbjct: 351 aagatctccttgagaagcttgatcgaccgttccgtggttgagagcttcggcgccggaggg 410
Query: 1669 aagacctgcatcctctccagggtctacccgtcgctggccatcggcaaggacgctcgcctc 1728
||||||||||||||||| || || ||||||| |||| ||||| || ||||| | |||
Sbjct: 411 aagacctgcatcctctcgagagtgtacccgtncatggcgatcgggaaagacgcgcatctc 470
Query: 1729 tacgtgttcaacaa 1742
||||||||||||||
Sbjct: 471 tacgtgttcaacaa 484
Score = 52.0 bits (26), Expect = 7e-005
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1286 ctgacgtggaggtgagcttcgaggtg 1311
||||||||||||||||||||||||||
Sbjct: 37 ctgacgtggaggtgagcttcgaggtg 62
>gb|BI959253.1|BI959253 HVSMEn0018O17f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0018O17f, mRNA sequence
Length = 647
Score = 81.8 bits (41), Expect = 8e-014
Identities = 101/121 (83%)
Strand = Plus / Plus
Query: 199 acggggtaccacttccagccccccaagaactggatcaatgatcccaacgcgcccatgtac 258
||||||| ||||||||||||| ||||||||||| || || ||||||| || | |||
Sbjct: 455 acggggttccacttccagcccgagaagaactggatgaacgaccccaacggtccggtttac 514
Query: 259 tacaaggggtggtaccatttcttctaccaatacaatcccaagggcgccgtatggggcaac 318
||||||||||||||||| |||||||||| ||||| ||| | |||||| | |||||||||
Sbjct: 515 tacaaggggtggtaccacctcttctaccagtacaaccccgacggcgccatttggggcaac 574
Query: 319 a 319
|
Sbjct: 575 a 575
>gb|BI960418.1|BI960418 HVSMEn0024I13f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0024I13f, mRNA sequence
Length = 660
Score = 81.8 bits (41), Expect = 8e-014
Identities = 95/113 (84%)
Strand = Plus / Plus
Query: 207 ccacttccagccccccaagaactggatcaatgatcccaacgcgcccatgtactacaaggg 266
||||||||||||| ||||||||||| || || ||||||| ||| |||||||||||||
Sbjct: 487 ccacttccagcccgagaagaactggatgaacgaccccaacggtcccgtgtactacaaggg 546
Query: 267 gtggtaccatttcttctaccaatacaatcccaagggcgccgtatggggcaaca 319
|||||||| ||||||||||||||| ||| | |||||| | ||||||||||
Sbjct: 547 atggtaccacctcttctaccaatacacccccgacggcgccatctggggcaaca 599
>gb|BQ754305.1|BQ754305 EBca01_SQ003_I07_R carpel, pre-anthesis, no treatment, cv Optic,
EBca01 Hordeum vulgare subsp. vulgare cDNA clone
EBca01_SQ003_I07 5', mRNA sequence
Length = 585
Score = 81.8 bits (41), Expect = 8e-014
Identities = 101/121 (83%)
Strand = Plus / Plus
Query: 199 acggggtaccacttccagccccccaagaactggatcaatgatcccaacgcgcccatgtac 258
||||||| ||||||||||||| ||||||||||| || || ||||||| || | |||
Sbjct: 443 acggggttccacttccagcccgagaagaactggatgaacgaccccaacggtccggtttac 502
Query: 259 tacaaggggtggtaccatttcttctaccaatacaatcccaagggcgccgtatggggcaac 318
||||||||||||||||| |||||||||| ||||| ||| | |||||| | |||||||||
Sbjct: 503 tacaaggggtggtaccacctcttctaccagtacaaccccgacggcgccatttggggcaac 562
Query: 319 a 319
|
Sbjct: 563 a 563
>gb|BI951140.1|BI951140 HVSMEl0024K02f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0024K02f, mRNA sequence
Length = 877
Score = 79.8 bits (40), Expect = 3e-013
Identities = 97/116 (83%)
Strand = Plus / Plus
Query: 183 caaccccctgctcaggacggggtaccacttccagccccccaagaactggatcaatgatcc 242
||||||| |||||||||| || |||||||||||||||||||| |||||||| || |||||
Sbjct: 180 caaccccttgctcaggacaggataccacttccagccccccaaaaactggattaacgatcc 239
Query: 243 caacgcgcccatgtactacaaggggtggtaccatttcttctaccaatacaatccca 298
|| | ||| | ||||||||||| |||| ||| || || ||||| ||||| ||||
Sbjct: 240 aaatgggccactatactacaagggatggtgccacttgttttaccagtacaacccca 295
>gb|CB879899.1|CB879899 HP08F21T HP Hordeum vulgare subsp. vulgare cDNA clone HP08F21
5-PRIME, mRNA sequence
Length = 511
Score = 73.8 bits (37), Expect = 2e-011
Identities = 76/89 (85%)
Strand = Plus / Plus
Query: 205 taccacttccagccccccaagaactggatcaatgatcccaacgcgcccatgtactacaag 264
||||||||||||||| ||||||||||||| || ||||| || | ||||||||| ||||
Sbjct: 328 taccacttccagcccgccaagaactggatgaacgatccgaatggtcccatgtaccacaac 387
Query: 265 gggtggtaccatttcttctaccaatacaa 293
|| | |||||| ||||||||||| |||||
Sbjct: 388 ggattgtaccacttcttctaccagtacaa 416
>gb|BG343465.2|BG343465 HVSMEg0005N10f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0005N10f, mRNA sequence
Length = 912
Score = 69.9 bits (35), Expect = 3e-010
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 205 taccacttccagccccccaagaactggatcaatgatcccaacgcgcccatgtactacaa 263
|||||||| ||||||||||||||||||||||| ||||| || | ||| |||||||||||
Sbjct: 134 taccacttacagccccccaagaactggatcaacgatccaaatgggccaatgtactacaa 192
>gb|BQ765899.1|BQ765899 EBro03_SQ008_A13_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ008_A13 5', mRNA sequence
Length = 460
Score = 69.9 bits (35), Expect = 3e-010
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 186 ccccctgctcaggacggggtaccacttccagccccccaagaactggatcaa 236
|||||||||| ||||||| ||||||||||| ||||||| ||||||||||||
Sbjct: 195 ccccctgctccggacgggctaccacttccaaccccccatgaactggatcaa 245
>gb|BF630067.2|BF630067 HVSMEb0007N12f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0007N12f, mRNA sequence
Length = 497
Score = 67.9 bits (34), Expect = 1e-009
Identities = 73/86 (84%)
Strand = Plus / Plus
Query: 497 accaggtccagaacgtggcgtacccgaagaacgtgtcggacccgctgctccgggagtggg 556
|||||||||||||||| || ||||| ||||||| || |||||||| ||| ||| ||||
Sbjct: 201 accaggtccagaacgtcgcctaccccaagaacgcctctgacccgctcctcgtggaatggg 260
Query: 557 tgaagccctcgcacaaccccgtcatc 582
|||||||| | ||||||||||||||
Sbjct: 261 tgaagcccgagtacaaccccgtcatc 286
>gb|BF258913.2|BF258913 HVSMEf0017A16f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0017A16f, mRNA sequence
Length = 803
Score = 67.9 bits (34), Expect = 1e-009
Identities = 73/86 (84%)
Strand = Plus / Plus
Query: 497 accaggtccagaacgtggcgtacccgaagaacgtgtcggacccgctgctccgggagtggg 556
|||||||||||||||| || ||||| ||||||| || |||||||| ||| ||| ||||
Sbjct: 455 accaggtccagaacgtcgcctaccccaagaacgcctctgacccgctcctcgtggaatggg 514
Query: 557 tgaagccctcgcacaaccccgtcatc 582
|||||||| | ||||||||||||||
Sbjct: 515 tgaagcccgagtacaaccccgtcatc 540
Score = 50.1 bits (25), Expect = 3e-004
Identities = 73/89 (82%)
Strand = Plus / Plus
Query: 205 taccacttccagccccccaagaactggatcaatgatcccaacgcgcccatgtactacaag 264
|||||||| ||||| ||||||||||| || |||||||| | ||||||||| ||||
Sbjct: 166 taccactttcagccggccaagaactggcagaacgatcccaatggtcccatgtaccacaac 225
Query: 265 gggtggtaccatttcttctaccaatacaa 293
|| | |||||| ||||||||||| |||||
Sbjct: 226 ggattgtaccacttcttctaccagtacaa 254
>gb|BF065803.2|BF065803 HV_CEb0014A16f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0014A16f, mRNA sequence
Length = 920
Score = 67.9 bits (34), Expect = 1e-009
Identities = 73/86 (84%)
Strand = Plus / Plus
Query: 497 accaggtccagaacgtggcgtacccgaagaacgtgtcggacccgctgctccgggagtggg 556
|||||||||||||||| || ||||| ||||||| || |||||||| ||| ||| ||||
Sbjct: 31 accaggtccagaacgtcgcctaccccaagaacgcctctgacccgctcctcgtggaatggg 90
Query: 557 tgaagccctcgcacaaccccgtcatc 582
|||||||| | ||||||||||||||
Sbjct: 91 tgaagcccgagtacaaccccgtcatc 116
Score = 42.1 bits (21), Expect = 0.071
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1060 tggggctgggctaacgagtccgaca 1084
||||||||||| |||||||||||||
Sbjct: 579 tggggctgggccaacgagtccgaca 603
>gb|BE558756.2|BE558756 HV_CEb0020F02f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0020F02f, mRNA sequence
Length = 799
Score = 67.9 bits (34), Expect = 1e-009
Identities = 73/86 (84%)
Strand = Plus / Plus
Query: 497 accaggtccagaacgtggcgtacccgaagaacgtgtcggacccgctgctccgggagtggg 556
|||||||||||||||| || ||||| ||||||| || |||||||| ||| ||| ||||
Sbjct: 246 accaggtccagaacgtcgcctaccccaagaacgcctctgacccgctcctcgtggaatggg 305
Query: 557 tgaagccctcgcacaaccccgtcatc 582
|||||||| | ||||||||||||||
Sbjct: 306 tgaagcccgagtacaaccccgtcatc 331
Score = 40.1 bits (20), Expect = 0.28
Identities = 38/44 (86%)
Strand = Plus / Plus
Query: 250 cccatgtactacaaggggtggtaccatttcttctaccaatacaa 293
||||||||| |||| || | |||||| ||||||||||| |||||
Sbjct: 2 cccatgtaccacaacggattgtaccacttcttctaccagtacaa 45
>gb|AV926089.1|AV926089 AV926089 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd18b04 5', mRNA sequence
Length = 550
Score = 67.9 bits (34), Expect = 1e-009
Identities = 73/86 (84%)
Strand = Plus / Plus
Query: 497 accaggtccagaacgtggcgtacccgaagaacgtgtcggacccgctgctccgggagtggg 556
|||||||||||||||| || ||||| ||||||| || |||||||| ||| ||| ||||
Sbjct: 156 accaggtccagaacgtcgcctaccccaagaacgcctctgacccgctcctcgtggaatggg 215
Query: 557 tgaagccctcgcacaaccccgtcatc 582
|||||||| | ||||||||||||||
Sbjct: 216 tgaagcccgagtacaaccccgtcatc 241
>gb|BQ471962.1|BQ471962 HV04A04r HV Hordeum vulgare subsp. vulgare cDNA clone HV04A04
5-PRIME, mRNA sequence
Length = 460
Score = 67.9 bits (34), Expect = 1e-009
Identities = 73/86 (84%)
Strand = Plus / Plus
Query: 497 accaggtccagaacgtggcgtacccgaagaacgtgtcggacccgctgctccgggagtggg 556
|||||||||||||||| || ||||| ||||||| || |||||||| ||| ||| ||||
Sbjct: 311 accaggtccagaacgtcgcctaccccaagaacgcctctgacccgctcctcgtggaatggg 370
Query: 557 tgaagccctcgcacaaccccgtcatc 582
|||||||| | ||||||||||||||
Sbjct: 371 tgaagcccgagtacaaccccgtcatc 396
Score = 65.9 bits (33), Expect = 5e-009
Identities = 75/89 (84%)
Strand = Plus / Plus
Query: 205 taccacttccagccccccaagaactggatcaatgatcccaacgcgcccatgtactacaag 264
||||||||||||||| ||||||||||| || |||||||| | ||||||||| ||||
Sbjct: 22 taccacttccagcccgccaagaactggcagaacgatcccaatggtcccatgtaccacaac 81
Query: 265 gggtggtaccatttcttctaccaatacaa 293
|| | |||||| ||||||||||| |||||
Sbjct: 82 ggattgtaccacttcttctaccagtacaa 110
>gb|BQ768116.1|BQ768116 EBro08_SQ010_A24_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ010_A24 5', mRNA sequence
Length = 642
Score = 67.9 bits (34), Expect = 1e-009
Identities = 73/86 (84%)
Strand = Plus / Plus
Query: 497 accaggtccagaacgtggcgtacccgaagaacgtgtcggacccgctgctccgggagtggg 556
|||||||||||||||| || ||||| ||||||| || |||||||| ||| ||| ||||
Sbjct: 500 accaggtccagaacgtcgcctaccccaagaacgcctctgacccgctcctcgtggaatggg 559
Query: 557 tgaagccctcgcacaaccccgtcatc 582
|||||||| | ||||||||||||||
Sbjct: 560 tgaagcccgagtacaaccccgtcatc 585
Score = 65.9 bits (33), Expect = 5e-009
Identities = 75/89 (84%)
Strand = Plus / Plus
Query: 205 taccacttccagccccccaagaactggatcaatgatcccaacgcgcccatgtactacaag 264
||||||||||||||| ||||||||||| || |||||||| | ||||||||| ||||
Sbjct: 211 taccacttccagcccgccaagaactggcagaacgatcccaatggtcccatgtaccacaac 270
Query: 265 gggtggtaccatttcttctaccaatacaa 293
|| | |||||| ||||||||||| |||||
Sbjct: 271 ggattgtaccacttcttctaccagtacaa 299
>gb|BU995607.1|BU995607 HM10M18r HM Hordeum vulgare subsp. vulgare cDNA clone HM10M18
5-PRIME, mRNA sequence
Length = 625
Score = 67.9 bits (34), Expect = 1e-009
Identities = 73/86 (84%)
Strand = Plus / Plus
Query: 497 accaggtccagaacgtggcgtacccgaagaacgtgtcggacccgctgctccgggagtggg 556
|||||||||||||||| || ||||| ||||||| || |||||||| ||| ||| ||||
Sbjct: 279 accaggtccagaacgtcgcctaccccaagaacgcctctgacccgctcctcgtggaatggg 338
Query: 557 tgaagccctcgcacaaccccgtcatc 582
|||||||| | ||||||||||||||
Sbjct: 339 tgaagcccgagtacaaccccgtcatc 364
Score = 44.1 bits (22), Expect = 0.018
Identities = 64/78 (82%)
Strand = Plus / Plus
Query: 216 gccccccaagaactggatcaatgatcccaacgcgcccatgtactacaaggggtggtacca 275
|||| ||||||||||| || |||||||| | ||||||||| |||| || | ||||||
Sbjct: 1 gcccgccaagaactggcagaacgatcccaatggtcccatgtaccacaacggattgtacca 60
Query: 276 tttcttctaccaatacaa 293
||||||||||| |||||
Sbjct: 61 cttcttctaccagtacaa 78
>gb|BQ468368.1|BQ468368 HM01B03T HM Hordeum vulgare subsp. vulgare cDNA clone HM01B03
5-PRIME, mRNA sequence
Length = 569
Score = 65.9 bits (33), Expect = 5e-009
Identities = 75/89 (84%)
Strand = Plus / Plus
Query: 205 taccacttccagccccccaagaactggatcaatgatcccaacgcgcccatgtactacaag 264
||||||||||||||| ||||||||||| || |||||||| | ||||||||| ||||
Sbjct: 227 taccacttccagcccgccaagaactggcagaacgatcccaatggtcccatgtaccacaac 286
Query: 265 gggtggtaccatttcttctaccaatacaa 293
|| | |||||| ||||||||||| |||||
Sbjct: 287 ggattgtaccacttcttctaccagtacaa 315
Score = 44.1 bits (22), Expect = 0.018
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 497 accaggtccagaacgtggcgtacccgaagaacgtgtcggacccgct 542
|||||||||||||||| || ||||| ||||||| || ||||||||
Sbjct: 516 accaggtccagaacgttgcctaccccaagaacgcctctgacccgct 561
>gb|BF254441.2|BF254441 HVSMEf0004A12f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0004A12f, mRNA sequence
Length = 855
Score = 61.9 bits (31), Expect = 8e-008
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 994 tacgactacggcaacttctacgcgtccaagacgttctacgacccggccaag 1044
||||||| ||||| ||||||||||||||||| ||||||||||| ||||||
Sbjct: 28 tacgactggggcaagttctacgcgtccaagaccttctacgaccctgccaag 78
>gb|CB882214.1|CB882214 HL01D13w HL Hordeum vulgare subsp. vulgare cDNA clone HL01D13
3-PRIME, mRNA sequence
Length = 624
Score = 61.9 bits (31), Expect = 8e-008
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 535 gacccgctgctccgggagtgggtgaagccctcgcacaaccccgtcat 581
|||||||||||||| ||||||||||||||| | |||||||||||||
Sbjct: 381 gacccgctgctccgcgagtgggtgaagcccgcctacaaccccgtcat 427
Score = 44.1 bits (22), Expect = 0.018
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 611 agttccgcgacccgaccacggcctgg 636
||||||||||||| ||||||||||||
Sbjct: 457 agttccgcgaccctaccacggcctgg 482
>gb|AL505004.1|AL505004 AL505004 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW07B12V 5', mRNA sequence
Length = 700
Score = 60.0 bits (30), Expect = 3e-007
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 1003 ggcaacttctacgcgtccaagacgttctacgacccggccaag 1044
||||| ||||||||||||||||| ||||||||||| ||||||
Sbjct: 306 ggcaagttctacgcgtccaagaccttctacgaccccgccaag 347
>gb|BF254279.2|BF254279 HVSMEf0003I12f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0003I12f, mRNA sequence
Length = 775
Score = 60.0 bits (30), Expect = 3e-007
Identities = 81/98 (82%)
Strand = Plus / Plus
Query: 532 tcggacccgctgctccgggagtgggtgaagccctcgcacaaccccgtcatcgtccccgag 591
|||||||||||||||||||||||||| |||||| | |||||||| || || || |||
Sbjct: 109 tcggacccgctgctccgggagtgggtcaagcccgggtacaaccccatcgccgagccggag 168
Query: 592 ggcggcatcaacgcgacgcagttccgcgacccgaccac 629
| |||||| ||||| || ||| | || |||||||||||
Sbjct: 169 gccggcatgaacgccacccaggtgcgggacccgaccac 206
>gb|BF616993.2|BF616993 HVSMEc0014D10f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0014D10f, mRNA sequence
Length = 738
Score = 54.0 bits (27), Expect = 2e-005
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 256 tactacaaggggtggtaccatttcttctaccaatacaatcccaagggcgccgtatggggc 315
|||||||||||||||||||| |||||||||| ||||| ||| | || ||| | ||||||
Sbjct: 492 tactacaaggggtggtaccacctcttctaccagtacaaccccgacggggccctttggggc 551
Query: 316 aac 318
|||
Sbjct: 552 aac 554
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 307,034
Number of Sequences: 312970
Number of extensions: 307034
Number of successful extensions: 95108
Number of sequences better than 0.5: 107
Number of HSP's better than 0.5 without gapping: 94
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 94771
Number of HSP's gapped (non-prelim): 282
length of query: 2027
length of database: 175,134,539
effective HSP length: 20
effective length of query: 2007
effective length of database: 168,875,139
effective search space: 338932403973
effective search space used: 338932403973
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)