BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2477970.2.1
(699 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AL508436.1|AL508436 AL508436 Hordeum vulgare Barke devel... 464 e-129
gb|BF625537.1|BF625537 HVSMEa0011C06f Hordeum vulgare seedl... 464 e-129
gb|BF258428.2|BF258428 HVSMEf0015L04f Hordeum vulgare seedl... 464 e-129
gb|BF263565.1|BF263565 HV_CEa0007B07f Hordeum vulgare seedl... 464 e-129
gb|BE455739.3|BE455739 HVSMEg0019I02f Hordeum vulgare pre-a... 464 e-129
gb|BE193544.3|BE193544 HVSMEh0081I18f Hordeum vulgare 5-45 ... 464 e-129
gb|AV933720.1|AV933720 AV933720 K. Sato unpublished cDNA li... 464 e-129
gb|BQ459634.1|BQ459634 HA08I17r HA Hordeum vulgare subsp. v... 464 e-129
gb|BQ460154.1|BQ460154 HA07B07r HA Hordeum vulgare subsp. v... 464 e-129
gb|BQ460559.1|BQ460559 HA09C11r HA Hordeum vulgare subsp. v... 464 e-129
gb|BQ462523.1|BQ462523 HI01C15T HI Hordeum vulgare subsp. v... 464 e-129
gb|BQ464469.1|BQ464469 HF02F24r HF Hordeum vulgare subsp. v... 464 e-129
gb|BQ464669.1|BQ464669 HF02O21r HF Hordeum vulgare subsp. v... 464 e-129
gb|BQ466911.1|BQ466911 HS01P11T HS Hordeum vulgare subsp. v... 464 e-129
gb|BQ467196.1|BQ467196 HS02P11r HS Hordeum vulgare subsp. v... 464 e-129
gb|BQ472021.1|BQ472021 HV04C24r HV Hordeum vulgare subsp. v... 464 e-129
gb|BM096577.2|BM096577 EBma05_SQ001_M17_R maternal, 12 DPA,... 464 e-129
gb|BM101069.2|BM101069 EBpi01_SQ002_M15_R pistil, 1 DPA, no... 464 e-129
gb|BM370624.2|BM370624 EBro08_SQ004_M12_R root, 3 week, dro... 464 e-129
gb|BQ761977.1|BQ761977 EBpi01_SQ005_N12_R pistil, 1 DPA, no... 464 e-129
gb|BQ765267.1|BQ765267 EBro03_SQ006_N16_R root, 3 week, wat... 464 e-129
gb|BU976684.1|BU976684 HA10B23r HA Hordeum vulgare subsp. v... 464 e-129
gb|BU977306.1|BU977306 HA11D05r HA Hordeum vulgare subsp. v... 464 e-129
gb|BU978130.1|BU978130 HA12K04r HA Hordeum vulgare subsp. v... 464 e-129
gb|BU983445.1|BU983445 HA29M05r HA Hordeum vulgare subsp. v... 464 e-129
gb|BU983658.1|BU983658 HA30H20r HA Hordeum vulgare subsp. v... 464 e-129
gb|BU983953.1|BU983953 HA31I18r HA Hordeum vulgare subsp. v... 464 e-129
gb|BU994920.1|BU994920 HM08J23r HM Hordeum vulgare subsp. v... 464 e-129
gb|BU995159.1|BU995159 HM09G09r HM Hordeum vulgare subsp. v... 464 e-129
gb|BU995572.1|BU995572 HM10K13r HM Hordeum vulgare subsp. v... 464 e-129
gb|BU997859.1|BU997859 HI09D19r HI Hordeum vulgare subsp. v... 464 e-129
gb|CA003127.1|CA003127 HS09H24r HS Hordeum vulgare subsp. v... 464 e-129
gb|CA021554.1|CA021554 HZ40G24r HZ Hordeum vulgare subsp. v... 464 e-129
gb|CA022311.1|CA022311 HZ42M02r HZ Hordeum vulgare subsp. v... 464 e-129
gb|CA023078.1|CA023078 HZ45C21r HZ Hordeum vulgare subsp. v... 464 e-129
gb|CA024593.1|CA024593 HZ49M01r HZ Hordeum vulgare subsp. v... 464 e-129
gb|CA029521.1|CA029521 HZ65H09r HZ Hordeum vulgare subsp. v... 464 e-129
gb|CA030122.1|CA030122 HX06C11r HX Hordeum vulgare subsp. v... 464 e-129
gb|CA031309.1|CA031309 HX09J10r HX Hordeum vulgare subsp. v... 464 e-129
gb|CA032961.1|CA032961 HX14L09r HX Hordeum vulgare subsp. v... 464 e-129
gb|CB881050.1|CB881050 HM08J23w HM Hordeum vulgare subsp. v... 464 e-129
gb|CB881864.1|CB881864 HM11C02w HM Hordeum vulgare subsp. v... 464 e-129
gb|CB883688.1|CB883688 HQ02P20w HQ Hordeum vulgare subsp. v... 464 e-129
gb|CV053918.1|CV053918 BNEL104f5 Barley EST endosperm libra... 464 e-129
gb|BF629931.2|BF629931 HVSMEb0007F20f Hordeum vulgare seedl... 460 e-128
gb|AV921646.1|AV921646 AV921646 K. Sato unpublished cDNA li... 460 e-128
gb|BM369641.2|BM369641 EBem07_SQ004_D07_R embryo, 28 DPA, n... 460 e-128
gb|BM099462.2|BM099462 EBes01_SQ003_F04_R embryo sac, 4-6 D... 460 e-128
gb|BU981394.1|BU981394 HA23H21r HA Hordeum vulgare subsp. v... 460 e-128
gb|BU995711.1|BU995711 HM11C02r HM Hordeum vulgare subsp. v... 460 e-128
gb|CK125403.1|CK125403 BES1824107o13 BES1824 Hordeum vulgar... 458 e-127
gb|BI947285.1|BI947285 HVSMEl0005A10f Hordeum vulgare spike... 456 e-127
gb|BQ767814.1|BQ767814 EBro08_SQ009_M21_R root, 3 week, dro... 456 e-127
gb|AL507259.1|AL507259 AL507259 Hordeum vulgare Barke devel... 452 e-126
gb|BM443494.2|BM443494 EBro02_SQ005_F22_R root, 3 week, hyd... 452 e-126
gb|BQ766083.1|BQ766083 EBro08_SQ005_B01_R root, 3 week, dro... 452 e-126
gb|CB875866.1|CB875866 HX09J10w HX Hordeum vulgare subsp. v... 452 e-126
gb|CK122619.1|CK122619 BES1824104k15 BES1824 Hordeum vulgar... 452 e-126
gb|AV913219.1|AV913219 AV913219 K. Sato unpublished cDNA li... 450 e-125
gb|BJ549276.1|BJ549276 BJ549276 K. Sato unpublished cDNA li... 450 e-125
gb|BM370978.2|BM370978 EBro04_SQ003_B23_R root, 3 week, sal... 448 e-124
gb|BJ549799.1|BJ549799 BJ549799 K. Sato unpublished cDNA li... 446 e-124
gb|CK125050.1|CK125050 BES1824111B1d07 BES1824 Hordeum vulg... 446 e-124
gb|AV918512.1|AV918512 AV918512 K. Sato unpublished cDNA li... 442 e-123
gb|AJ460353.1|AJ460353 AJ460353 S00002 Hordeum vulgare subs... 440 e-122
gb|BQ660143.1|BQ660143 HI01C15w HI Hordeum vulgare subsp. v... 440 e-122
gb|BU995295.1|BU995295 HM09M18r HM Hordeum vulgare subsp. v... 440 e-122
gb|BM369742.2|BM369742 EBem07_SQ004_H16_R embryo, 28 DPA, n... 432 e-120
gb|BU983015.1|BU983015 HA28E17r HA Hordeum vulgare subsp. v... 432 e-120
gb|CB881434.1|CB881434 HM09M18w HM Hordeum vulgare subsp. v... 414 e-114
gb|BQ767276.1|BQ767276 EBro08_SQ008_O10_R root, 3 week, dro... 412 e-114
gb|CA024229.1|CA024229 HZ48L16r HZ Hordeum vulgare subsp. v... 408 e-112
gb|CA026830.1|CA026830 HZ57B11r HZ Hordeum vulgare subsp. v... 406 e-112
gb|AW983058.3|AW983058 HVSMEg0004P07f Hordeum vulgare pre-a... 404 e-111
gb|CK124366.1|CK124366 BES1824108i07 BES1824 Hordeum vulgar... 400 e-110
gb|CA000383.1|CA000383 HS08M03u HS Hordeum vulgare subsp. v... 398 e-110
gb|AV916223.1|AV916223 AV916223 K. Sato unpublished cDNA li... 396 e-109
gb|BJ547250.1|BJ547250 BJ547250 K. Sato unpublished cDNA li... 396 e-109
gb|BQ468103.1|BQ468103 HR01P07r HR Hordeum vulgare subsp. v... 391 e-107
gb|BF629583.3|BF629583 HVSMEb0013G19f Hordeum vulgare seedl... 385 e-105
gb|BQ657231.1|BQ657231 HA09C11u HA Hordeum vulgare subsp. v... 381 e-104
gb|CB881712.1|CB881712 HM10K13w HM Hordeum vulgare subsp. v... 379 e-104
gb|BQ664633.1|BQ664633 HV04C24u HV Hordeum vulgare subsp. v... 375 e-102
gb|BU989484.1|BU989484 HF21N22r HF Hordeum vulgare subsp. v... 375 e-102
gb|CB881302.1|CB881302 HM09G09w HM Hordeum vulgare subsp. v... 375 e-102
gb|AL509336.1|AL509336 AL509336 Hordeum vulgare Barke devel... 371 e-101
gb|BM444427.1|BM444427 EBem09_SQ005_D06_R embryo, 1 Day ger... 371 e-101
gb|BJ546572.1|BJ546572 BJ546572 K. Sato unpublished cDNA li... 369 e-101
gb|BU980860.1|BU980860 HA21O14r HA Hordeum vulgare subsp. v... 367 e-100
gb|CA027771.1|CA027771 HZ59P16r HZ Hordeum vulgare subsp. v... 367 e-100
gb|AV936921.1|AV936921 AV936921 K. Sato unpublished cDNA li... 365 1e-099
gb|BU986216.1|BU986216 HF11A15r HF Hordeum vulgare subsp. v... 365 1e-099
gb|CA023934.1|CA023934 HZ47N20r HZ Hordeum vulgare subsp. v... 365 1e-099
gb|CV060009.1|CV060009 BNEL53d4 Barley EST endosperm librar... 365 1e-099
gb|BQ760069.1|BQ760069 EBpi07_SQ003_I05_R pistil, 12 DPA, n... 355 1e-096
gb|BJ549720.1|BJ549720 BJ549720 K. Sato unpublished cDNA li... 355 1e-096
gb|AL501860.1|AL501860 AL501860 Hordeum vulgare Barke roots... 353 5e-096
gb|BQ470834.1|BQ470834 HX04C21r HX Hordeum vulgare subsp. v... 353 5e-096
gb|BJ545092.1|BJ545092 BJ545092 K. Sato unpublished cDNA li... 353 5e-096
gb|AL504554.1|AL504554 AL504554 Hordeum vulgare Barke roots... 349 8e-095
gb|BM099830.2|BM099830 EBes01_SQ004_G10_R embryo sac, 4-6 D... 349 8e-095
gb|BU981351.1|BU981351 HA23F19r HA Hordeum vulgare subsp. v... 349 8e-095
gb|BF264609.2|BF264609 HV_CEa0009O05f Hordeum vulgare seedl... 343 5e-093
gb|BU976604.1|BU976604 HA03P15u HA Hordeum vulgare subsp. v... 343 5e-093
gb|CA020530.1|CA020530 HZ36J10r HZ Hordeum vulgare subsp. v... 343 5e-093
gb|CA020704.1|CA020704 HZ37D18r HZ Hordeum vulgare subsp. v... 343 5e-093
gb|BQ469684.1|BQ469684 HZ01I23r HZ Hordeum vulgare subsp. v... 341 2e-092
gb|CA004351.1|CA004351 HS17F07r HS Hordeum vulgare subsp. v... 341 2e-092
gb|BU976685.1|BU976685 HA10B23u HA Hordeum vulgare subsp. v... 337 3e-091
gb|BU983170.1|BU983170 HA28M09r HA Hordeum vulgare subsp. v... 337 3e-091
gb|BU976518.1|BU976518 HA03N12r HA Hordeum vulgare subsp. v... 335 1e-090
gb|CA001572.1|CA001572 HS17F07u HS Hordeum vulgare subsp. v... 335 1e-090
gb|BQ657393.1|BQ657393 HA08I17u HA Hordeum vulgare subsp. v... 329 7e-089
gb|CA030233.1|CA030233 HX06H13r HX Hordeum vulgare subsp. v... 329 7e-089
gb|BQ662189.1|BQ662189 HR01P07u HR Hordeum vulgare subsp. v... 327 3e-088
gb|BU981863.1|BU981863 HA24N17r HA Hordeum vulgare subsp. v... 321 2e-086
gb|BJ549598.1|BJ549598 BJ549598 K. Sato unpublished cDNA li... 313 4e-084
gb|BJ550224.1|BJ550224 BJ550224 K. Sato unpublished cDNA li... 313 4e-084
gb|BM377776.2|BM377776 EBem04_SQ004_C07_R embryo, 12 DPA, n... 311 2e-083
gb|BJ549325.1|BJ549325 BJ549325 K. Sato unpublished cDNA li... 311 2e-083
gb|BJ550075.1|BJ550075 BJ550075 K. Sato unpublished cDNA li... 311 2e-083
gb|AJ460358.1|AJ460358 AJ460358 S00002 Hordeum vulgare subs... 309 7e-083
gb|BU980409.1|BU980409 HA20J06r HA Hordeum vulgare subsp. v... 305 1e-081
gb|CA002257.1|CA002257 HS07A02r HS Hordeum vulgare subsp. v... 305 1e-081
gb|CA002867.1|CA002867 HS08M03r HS Hordeum vulgare subsp. v... 305 1e-081
gb|CA027724.1|CA027724 HZ59N04r HZ Hordeum vulgare subsp. v... 305 1e-081
gb|BQ657768.1|BQ657768 HA07B07u HA Hordeum vulgare subsp. v... 291 2e-077
gb|BU978131.1|BU978131 HA12K04u HA Hordeum vulgare subsp. v... 285 1e-075
gb|BF627190.2|BF627190 HVSMEb0004D02f Hordeum vulgare seedl... 280 6e-074
gb|BU977307.1|BU977307 HA11D05u HA Hordeum vulgare subsp. v... 278 2e-073
gb|BQ767191.1|BQ767191 EBro08_SQ008_A07_R root, 3 week, dro... 270 6e-071
gb|AJ460355.1|AJ460355 AJ460355 S00002 Hordeum vulgare subs... 266 9e-070
gb|AL511648.1|AL511648 AL511648 Hordeum vulgare Barke devel... 262 1e-068
gb|CD664060.1|CD664060 UCRHV18_07cc12_b1 Drought-stressed D... 250 5e-065
gb|BU988050.1|BU988050 HF16I11r HF Hordeum vulgare subsp. v... 248 2e-064
gb|CA026541.1|CA026541 HZ56D09r HZ Hordeum vulgare subsp. v... 248 2e-064
gb|AV928701.1|AV928701 AV928701 K. Sato unpublished cDNA li... 246 8e-064
gb|AV928702.1|AV928702 AV928702 K. Sato unpublished cDNA li... 246 8e-064
gb|BF259781.3|BF259781 HVSMEf0020D24f Hordeum vulgare seedl... 244 3e-063
gb|AJ460356.1|AJ460356 AJ460356 S00002 Hordeum vulgare subs... 244 3e-063
gb|BU970935.1|BU970935 HB16B22r BC Hordeum vulgare subsp. v... 244 3e-063
gb|CA020886.1|CA020886 HZ38D10r HZ Hordeum vulgare subsp. v... 242 1e-062
gb|AV925924.1|AV925924 AV925924 K. Sato unpublished cDNA li... 238 2e-061
gb|AJ433166.1|AJ433166 AJ433166 S00002 Hordeum vulgare subs... 238 2e-061
gb|AJ460354.1|AJ460354 AJ460354 S00002 Hordeum vulgare subs... 236 8e-061
gb|AJ461098.1|AJ461098 AJ461098 S00002 Hordeum vulgare subs... 228 2e-058
gb|AV925925.1|AV925925 AV925925 K. Sato unpublished cDNA li... 226 8e-058
gb|BM444424.1|BM444424 EBem09_SQ005_D03_R embryo, 1 Day ger... 220 5e-056
gb|AJ460357.1|AJ460357 AJ460357 S00002 Hordeum vulgare subs... 212 1e-053
gb|BQ768660.1|BQ768660 EBro08_SQ012_G08_R root, 3 week, dro... 210 5e-053
gb|BI956918.1|BI956918 HVSMEn0006A19f Hordeum vulgare rachi... 190 4e-047
gb|AJ463137.1|AJ463137 AJ463137 S00002 Hordeum vulgare subs... 145 2e-033
gb|BJ544297.1|BJ544297 BJ544297 K. Sato unpublished cDNA li... 135 2e-030
gb|BM370873.1|BM370873 EBro04_SQ002_K01_R root, 3 week, sal... 125 2e-027
gb|BQ460461.1|BQ460461 HA09I16r HA Hordeum vulgare subsp. v... 125 2e-027
gb|BQ657136.1|BQ657136 HA09I16u HA Hordeum vulgare subsp. v... 125 2e-027
gb|BI779338.2|BI779338 EBro01_SQ003_L14_R root, 3 week, hyd... 125 2e-027
gb|BQ757552.1|BQ757552 EBem10_SQ004_H17_R embryo, 2 Day ger... 125 2e-027
gb|BM440941.2|BM440941 EBro08_SQ004_P12_R root, 3 week, dro... 117 5e-025
gb|BI957765.1|BI957765 HVSMEn0011B10f Hordeum vulgare rachi... 105 2e-021
gb|BJ545761.1|BJ545761 BJ545761 K. Sato unpublished cDNA li... 100 1e-019
gb|BQ757721.1|BQ757721 EBem10_SQ005_A05_R embryo, 2 Day ger... 86 2e-015
gb|BQ471240.1|BQ471240 HV01L21T HV Hordeum vulgare subsp. v... 48 4e-004
gb|BQ765193.1|BQ765193 EBro03_SQ006_A16_R root, 3 week, wat... 46 0.002
gb|CB878931.1|CB878931 HP10F15T HP Hordeum vulgare subsp. v... 42 0.024
gb|CV059180.1|CV059180 BNEL45c4 Barley EST endosperm librar... 42 0.024
gb|BF257096.3|BF257096 HVSMEf0011N14f Hordeum vulgare seedl... 38 0.38
gb|BM370955.2|BM370955 EBro04_SQ003_A15_R root, 3 week, sal... 38 0.38
gb|BQ765862.1|BQ765862 EBro03_SQ008_J11_R root, 3 week, wat... 38 0.38
gb|CB877903.1|CB877903 HP06J12T HP Hordeum vulgare subsp. v... 38 0.38
gb|AF334758.1|AF334758 Hordeum vulgare homeodomain protein ... 38 0.38
>gb|AL508436.1|AL508436 AL508436 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY08M02V 5',
mRNA sequence
Length = 655
Score = 464 bits (234), Expect = e-129
Identities = 396/450 (88%)
Strand = Plus / Plus
Query: 39 cggcggcggcgatgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccg 98
|||||||||||||||| || ||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 41 cggcggcggcgatgacgacccgcctcaagaagaaccgcaagaagcgcggccacgtctccg 100
Query: 99 ccgggcacggccgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtg 158
|||||||||| || | ||||||||| | ||||| || ||||| |||||||||||||| |
Sbjct: 101 ccgggcacgggcgtgtgggcaagcaccgcaagcatcccggaggccgcggtaacgccggag 160
Query: 159 gcatgcaccaccaccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttg 218
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||| || |
Sbjct: 161 gcatgcaccaccaccgcatcctcttcgacaagtaccatcccggctacttcggcaaagtcg 220
Query: 219 gcatgcgttacttccataagctccgcaacaagttctactgccccgcggtcaacatcgagc 278
| ||| | |||||||| |||||| |||||| ||||||| ||| | |||||| |||||
Sbjct: 221 gtatgaggtacttccacaagctcagcaacaggttctacaccccgaccgtcaacgtcgaga 280
Query: 279 gcctctggtcgatggtgcccaccgacaaggcggcggaggccggcggcgacaaggccccgc 338
| |||||||| |||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 281 ggctctggtccatggtgccgtccgacaaggccgcggaggccggcggcgacaaggcccccg 340
Query: 339 agatcgacgtcacgcagttcggctacttcaaggtgctcgggaagggggtgctgccgccaa 398
|||||||| |||||||||||||||||||||||||||| |||||| |||||||| |
Sbjct: 341 tcgtcgacgtctcgcagttcggctacttcaaggtgctcggcaaggggatgctgccggaga 400
Query: 399 agcccattgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggcag 458
||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |
Sbjct: 401 agcccatcgtcgtcaaggccaagctcatctccaagatcgccgagaagaagatcaaggccg 460
Query: 459 caggcggcgccgtcgtgctcaccgcctagg 488
| |||||||| ||||||||| ||||||||
Sbjct: 461 ccggcggcgctgtcgtgctcgtcgcctagg 490
>gb|BF625537.1|BF625537 HVSMEa0011C06f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0011C06f, mRNA sequence
Length = 653
Score = 464 bits (234), Expect = e-129
Identities = 396/450 (88%)
Strand = Plus / Plus
Query: 39 cggcggcggcgatgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccg 98
|||||||||||||||| || ||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 38 cggcggcggcgatgacgacccgcctcaagaagaaccgcaagaagcgcggccacgtctccg 97
Query: 99 ccgggcacggccgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtg 158
|||||||||| || | ||||||||| | ||||| || ||||| |||||||||||||| |
Sbjct: 98 ccgggcacgggcgtgtgggcaagcaccgcaagcatcccggaggccgcggtaacgccggag 157
Query: 159 gcatgcaccaccaccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttg 218
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||| || |
Sbjct: 158 gcatgcaccaccaccgcatcctcttcgacaagtaccatcccggctacttcggcaaagtcg 217
Query: 219 gcatgcgttacttccataagctccgcaacaagttctactgccccgcggtcaacatcgagc 278
| ||| | |||||||| |||||| |||||| ||||||| ||| | |||||| |||||
Sbjct: 218 gtatgaggtacttccacaagctcagcaacaggttctacaccccgaccgtcaacgtcgaga 277
Query: 279 gcctctggtcgatggtgcccaccgacaaggcggcggaggccggcggcgacaaggccccgc 338
| |||||||| |||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 278 ggctctggtccatggtgccgtccgacaaggccgcggaggccggcggcgacaaggcccccg 337
Query: 339 agatcgacgtcacgcagttcggctacttcaaggtgctcgggaagggggtgctgccgccaa 398
|||||||| |||||||||||||||||||||||||||| |||||| |||||||| |
Sbjct: 338 tcgtcgacgtctcgcagttcggctacttcaaggtgctcggcaaggggatgctgccggaga 397
Query: 399 agcccattgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggcag 458
||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |
Sbjct: 398 agcccatcgtcgtcaaggccaagctcatctccaagatcgccgagaagaagatcaaggccg 457
Query: 459 caggcggcgccgtcgtgctcaccgcctagg 488
| |||||||| ||||||||| ||||||||
Sbjct: 458 ccggcggcgctgtcgtgctcgtcgcctagg 487
>gb|BF258428.2|BF258428 HVSMEf0015L04f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0015L04f, mRNA sequence
Length = 761
Score = 464 bits (234), Expect = e-129
Identities = 396/450 (88%)
Strand = Plus / Plus
Query: 39 cggcggcggcgatgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccg 98
|||||||||||||||| || ||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 53 cggcggcggcgatgacgacccgcctcaagaagaaccgcaagaagcgcggccacgtctccg 112
Query: 99 ccgggcacggccgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtg 158
|||||||||| || | ||||||||| | ||||| || ||||| |||||||||||||| |
Sbjct: 113 ccgggcacgggcgtgtgggcaagcaccgcaagcatcccggaggccgcggtaacgccggag 172
Query: 159 gcatgcaccaccaccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttg 218
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||| || |
Sbjct: 173 gcatgcaccaccaccgcatcctcttcgacaagtaccatcccggctacttcggcaaagtcg 232
Query: 219 gcatgcgttacttccataagctccgcaacaagttctactgccccgcggtcaacatcgagc 278
| ||| | |||||||| |||||| |||||| ||||||| ||| | |||||| |||||
Sbjct: 233 gtatgaggtacttccacaagctcagcaacaggttctacaccccgaccgtcaacgtcgaga 292
Query: 279 gcctctggtcgatggtgcccaccgacaaggcggcggaggccggcggcgacaaggccccgc 338
| |||||||| |||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 293 ggctctggtccatggtgccgtccgacaaggccgcggaggccggcggcgacaaggcccccg 352
Query: 339 agatcgacgtcacgcagttcggctacttcaaggtgctcgggaagggggtgctgccgccaa 398
|||||||| |||||||||||||||||||||||||||| |||||| |||||||| |
Sbjct: 353 tcgtcgacgtctcgcagttcggctacttcaaggtgctcggcaaggggatgctgccggaga 412
Query: 399 agcccattgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggcag 458
||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |
Sbjct: 413 agcccatcgtcgtcaaggccaagctcatctccaagatcgccgagaagaagatcaaggccg 472
Query: 459 caggcggcgccgtcgtgctcaccgcctagg 488
| |||||||| ||||||||| ||||||||
Sbjct: 473 ccggcggcgctgtcgtgctcgtcgcctagg 502
>gb|BF263565.1|BF263565 HV_CEa0007B07f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0007B07f, mRNA sequence
Length = 603
Score = 464 bits (234), Expect = e-129
Identities = 396/450 (88%)
Strand = Plus / Plus
Query: 39 cggcggcggcgatgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccg 98
|||||||||||||||| || ||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 53 cggcggcggcgatgacgacccgcctcaagaagaaccgcaagaagcgcggccacgtctccg 112
Query: 99 ccgggcacggccgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtg 158
|||||||||| || | ||||||||| | ||||| || ||||| |||||||||||||| |
Sbjct: 113 ccgggcacgggcgtgtgggcaagcaccgcaagcatcccggaggccgcggtaacgccggag 172
Query: 159 gcatgcaccaccaccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttg 218
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||| || |
Sbjct: 173 gcatgcaccaccaccgcatcctcttcgacaagtaccatcccggctacttcggcaaagtcg 232
Query: 219 gcatgcgttacttccataagctccgcaacaagttctactgccccgcggtcaacatcgagc 278
| ||| | |||||||| |||||| |||||| ||||||| ||| | |||||| |||||
Sbjct: 233 gtatgaggtacttccacaagctcagcaacaggttctacaccccgaccgtcaacgtcgaga 292
Query: 279 gcctctggtcgatggtgcccaccgacaaggcggcggaggccggcggcgacaaggccccgc 338
| |||||||| |||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 293 ggctctggtccatggtgccgtccgacaaggccgcggaggccggcggcgacaaggcccccg 352
Query: 339 agatcgacgtcacgcagttcggctacttcaaggtgctcgggaagggggtgctgccgccaa 398
|||||||| |||||||||||||||||||||||||||| |||||| |||||||| |
Sbjct: 353 tcgtcgacgtctcgcagttcggctacttcaaggtgctcggcaaggggatgctgccggaga 412
Query: 399 agcccattgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggcag 458
||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |
Sbjct: 413 agcccatcgtcgtcaaggccaagctcatctccaagatcgccgagaagaagatcaaggccg 472
Query: 459 caggcggcgccgtcgtgctcaccgcctagg 488
| |||||||| ||||||||| ||||||||
Sbjct: 473 ccggcggcgctgtcgtgctcgtcgcctagg 502
>gb|BE455739.3|BE455739 HVSMEg0019I02f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0019I02f, mRNA sequence
Length = 844
Score = 464 bits (234), Expect = e-129
Identities = 396/450 (88%)
Strand = Plus / Plus
Query: 39 cggcggcggcgatgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccg 98
|||||||||||||||| || ||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 45 cggcggcggcgatgacgacccgcctcaagaagaaccgcaagaagcgcggccacgtctccg 104
Query: 99 ccgggcacggccgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtg 158
|||||||||| || | ||||||||| | ||||| || ||||| |||||||||||||| |
Sbjct: 105 ccgggcacgggcgtgtgggcaagcaccgcaagcatcccggaggccgcggtaacgccggag 164
Query: 159 gcatgcaccaccaccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttg 218
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||| || |
Sbjct: 165 gcatgcaccaccaccgcatcctcttcgacaagtaccatcccggctacttcggcaaagtcg 224
Query: 219 gcatgcgttacttccataagctccgcaacaagttctactgccccgcggtcaacatcgagc 278
| ||| | |||||||| |||||| |||||| ||||||| ||| | |||||| |||||
Sbjct: 225 gtatgaggtacttccacaagctcagcaacaggttctacaccccgaccgtcaacgtcgaga 284
Query: 279 gcctctggtcgatggtgcccaccgacaaggcggcggaggccggcggcgacaaggccccgc 338
| |||||||| |||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 285 ggctctggtccatggtgccgtccgacaaggccgcggaggccggcggcgacaaggcccccg 344
Query: 339 agatcgacgtcacgcagttcggctacttcaaggtgctcgggaagggggtgctgccgccaa 398
|||||||| |||||||||||||||||||||||||||| |||||| |||||||| |
Sbjct: 345 tcgtcgacgtctcgcagttcggctacttcaaggtgctcggcaaggggatgctgccggaga 404
Query: 399 agcccattgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggcag 458
||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |
Sbjct: 405 agcccatcgtcgtcaaggccaagctcatctccaagatcgccgagaagaagatcaaggccg 464
Query: 459 caggcggcgccgtcgtgctcaccgcctagg 488
| |||||||| ||||||||| ||||||||
Sbjct: 465 ccggcggcgctgtcgtgctcgtcgcctagg 494
>gb|BE193544.3|BE193544 HVSMEh0081I18f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0081I18f, mRNA sequence
Length = 710
Score = 464 bits (234), Expect = e-129
Identities = 396/450 (88%)
Strand = Plus / Plus
Query: 39 cggcggcggcgatgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccg 98
|||||||||||||||| || ||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 39 cggcggcggcgatgacgacccgcctcaagaagaaccgcaagaagcgcggccacgtctccg 98
Query: 99 ccgggcacggccgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtg 158
|||||||||| || | ||||||||| | ||||| || ||||| |||||||||||||| |
Sbjct: 99 ccgggcacgggcgtgtgggcaagcaccgcaagcatcccggaggccgcggtaacgccggag 158
Query: 159 gcatgcaccaccaccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttg 218
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||| || |
Sbjct: 159 gcatgcaccaccaccgcatcctcttcgacaagtaccatcccggctacttcggcaaagtcg 218
Query: 219 gcatgcgttacttccataagctccgcaacaagttctactgccccgcggtcaacatcgagc 278
| ||| | |||||||| |||||| |||||| ||||||| ||| | |||||| |||||
Sbjct: 219 gtatgaggtacttccacaagctcagcaacaggttctacaccccgaccgtcaacgtcgaga 278
Query: 279 gcctctggtcgatggtgcccaccgacaaggcggcggaggccggcggcgacaaggccccgc 338
| |||||||| |||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 279 ggctctggtccatggtgccgtccgacaaggccgcggaggccggcggcgacaaggcccccg 338
Query: 339 agatcgacgtcacgcagttcggctacttcaaggtgctcgggaagggggtgctgccgccaa 398
|||||||| |||||||||||||||||||||||||||| |||||| |||||||| |
Sbjct: 339 tcgtcgacgtctcgcagttcggctacttcaaggtgctcggcaaggggatgctgccggaga 398
Query: 399 agcccattgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggcag 458
||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |
Sbjct: 399 agcccatcgtcgtcaaggccaagctcatctccaagatcgccgagaagaagatcaaggccg 458
Query: 459 caggcggcgccgtcgtgctcaccgcctagg 488
| |||||||| ||||||||| ||||||||
Sbjct: 459 ccggcggcgctgtcgtgctcgtcgcctagg 488
>gb|AV933720.1|AV933720 AV933720 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal8f07 5', mRNA sequence
Length = 674
Score = 464 bits (234), Expect = e-129
Identities = 396/450 (88%)
Strand = Plus / Plus
Query: 39 cggcggcggcgatgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccg 98
|||||||||||||||| || ||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 41 cggcggcggcgatgacgacccgcctcaagaagaaccgcaagaagcgcggccacgtctccg 100
Query: 99 ccgggcacggccgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtg 158
|||||||||| || | ||||||||| | ||||| || ||||| |||||||||||||| |
Sbjct: 101 ccgggcacgggcgtgtgggcaagcaccgcaagcatcccggaggccgcggtaacgccggag 160
Query: 159 gcatgcaccaccaccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttg 218
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||| || |
Sbjct: 161 gcatgcaccaccaccgcatcctcttcgacaagtaccatcccggctacttcggcaaagtcg 220
Query: 219 gcatgcgttacttccataagctccgcaacaagttctactgccccgcggtcaacatcgagc 278
| ||| | |||||||| |||||| |||||| ||||||| ||| | |||||| |||||
Sbjct: 221 gtatgaggtacttccacaagctcagcaacaggttctacaccccgaccgtcaacgtcgaga 280
Query: 279 gcctctggtcgatggtgcccaccgacaaggcggcggaggccggcggcgacaaggccccgc 338
| |||||||| |||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 281 ggctctggtccatggtgccgtccgacaaggccgcggaggccggcggcgacaaggcccccg 340
Query: 339 agatcgacgtcacgcagttcggctacttcaaggtgctcgggaagggggtgctgccgccaa 398
|||||||| |||||||||||||||||||||||||||| |||||| |||||||| |
Sbjct: 341 tcgtcgacgtctcgcagttcggctacttcaaggtgctcggcaaggggatgctgccggaga 400
Query: 399 agcccattgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggcag 458
||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |
Sbjct: 401 agcccatcgtcgtcaaggccaagctcatctccaagatcgccgagaagaagatcaaggccg 460
Query: 459 caggcggcgccgtcgtgctcaccgcctagg 488
| |||||||| ||||||||| ||||||||
Sbjct: 461 ccggcggcgctgtcgtgctcgtcgcctagg 490
>gb|BQ459634.1|BQ459634 HA08I17r HA Hordeum vulgare subsp. vulgare cDNA clone HA08I17
5-PRIME, mRNA sequence
Length = 557
Score = 464 bits (234), Expect = e-129
Identities = 396/450 (88%)
Strand = Plus / Plus
Query: 39 cggcggcggcgatgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccg 98
|||||||||||||||| || ||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 65 cggcggcggcgatgacgacccgcctcaagaagaaccgcaagaagcgcggccacgtctccg 124
Query: 99 ccgggcacggccgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtg 158
|||||||||| || | ||||||||| | ||||| || ||||| |||||||||||||| |
Sbjct: 125 ccgggcacgggcgtgtgggcaagcaccgcaagcatcccggaggccgcggtaacgccggag 184
Query: 159 gcatgcaccaccaccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttg 218
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||| || |
Sbjct: 185 gcatgcaccaccaccgcatcctcttcgacaagtaccatcccggctacttcggcaaagtcg 244
Query: 219 gcatgcgttacttccataagctccgcaacaagttctactgccccgcggtcaacatcgagc 278
| ||| | |||||||| |||||| |||||| ||||||| ||| | |||||| |||||
Sbjct: 245 gtatgaggtacttccacaagctcagcaacaggttctacaccccgaccgtcaacgtcgaga 304
Query: 279 gcctctggtcgatggtgcccaccgacaaggcggcggaggccggcggcgacaaggccccgc 338
| |||||||| |||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 305 ggctctggtccatggtgccgtccgacaaggccgcggaggccggcggcgacaaggcccccg 364
Query: 339 agatcgacgtcacgcagttcggctacttcaaggtgctcgggaagggggtgctgccgccaa 398
|||||||| |||||||||||||||||||||||||||| |||||| |||||||| |
Sbjct: 365 tcgtcgacgtctcgcagttcggctacttcaaggtgctcggcaaggggatgctgccggaga 424
Query: 399 agcccattgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggcag 458
||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |
Sbjct: 425 agcccatcgtcgtcaaggccaagctcatctccaagatcgccgagaagaagatcaaggccg 484
Query: 459 caggcggcgccgtcgtgctcaccgcctagg 488
| |||||||| ||||||||| ||||||||
Sbjct: 485 ccggcggcgctgtcgtgctcgtcgcctagg 514
>gb|BQ460154.1|BQ460154 HA07B07r HA Hordeum vulgare subsp. vulgare cDNA clone HA07B07
5-PRIME, mRNA sequence
Length = 676
Score = 464 bits (234), Expect = e-129
Identities = 396/450 (88%)
Strand = Plus / Plus
Query: 39 cggcggcggcgatgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccg 98
|||||||||||||||| || ||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 52 cggcggcggcgatgacgacccgcctcaagaagaaccgcaagaagcgcggccacgtctccg 111
Query: 99 ccgggcacggccgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtg 158
|||||||||| || | ||||||||| | ||||| || ||||| |||||||||||||| |
Sbjct: 112 ccgggcacgggcgtgtgggcaagcaccgcaagcatcccggaggccgcggtaacgccggag 171
Query: 159 gcatgcaccaccaccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttg 218
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||| || |
Sbjct: 172 gcatgcaccaccaccgcatcctcttcgacaagtaccatcccggctacttcggcaaagtcg 231
Query: 219 gcatgcgttacttccataagctccgcaacaagttctactgccccgcggtcaacatcgagc 278
| ||| | |||||||| |||||| |||||| ||||||| ||| | |||||| |||||
Sbjct: 232 gtatgaggtacttccacaagctcagcaacaggttctacaccccgaccgtcaacgtcgaga 291
Query: 279 gcctctggtcgatggtgcccaccgacaaggcggcggaggccggcggcgacaaggccccgc 338
| |||||||| |||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 292 ggctctggtccatggtgccgtccgacaaggccgcggaggccggcggcgacaaggcccccg 351
Query: 339 agatcgacgtcacgcagttcggctacttcaaggtgctcgggaagggggtgctgccgccaa 398
|||||||| |||||||||||||||||||||||||||| |||||| |||||||| |
Sbjct: 352 tcgtcgacgtctcgcagttcggctacttcaaggtgctcggcaaggggatgctgccggaga 411
Query: 399 agcccattgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggcag 458
||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |
Sbjct: 412 agcccatcgtcgtcaaggccaagctcatctccaagatcgccgagaagaagatcaaggccg 471
Query: 459 caggcggcgccgtcgtgctcaccgcctagg 488
| |||||||| ||||||||| ||||||||
Sbjct: 472 ccggcggcgctgtcgtgctcgtcgcctagg 501
>gb|BQ460559.1|BQ460559 HA09C11r HA Hordeum vulgare subsp. vulgare cDNA clone HA09C11
5-PRIME, mRNA sequence
Length = 602
Score = 464 bits (234), Expect = e-129
Identities = 396/450 (88%)
Strand = Plus / Plus
Query: 39 cggcggcggcgatgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccg 98
|||||||||||||||| || ||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 48 cggcggcggcgatgacgacccgcctcaagaagaaccgcaagaagcgcggccacgtctccg 107
Query: 99 ccgggcacggccgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtg 158
|||||||||| || | ||||||||| | ||||| || ||||| |||||||||||||| |
Sbjct: 108 ccgggcacgggcgtgtgggcaagcaccgcaagcatcccggaggccgcggtaacgccggag 167
Query: 159 gcatgcaccaccaccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttg 218
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||| || |
Sbjct: 168 gcatgcaccaccaccgcatcctcttcgacaagtaccatcccggctacttcggcaaagtcg 227
Query: 219 gcatgcgttacttccataagctccgcaacaagttctactgccccgcggtcaacatcgagc 278
| ||| | |||||||| |||||| |||||| ||||||| ||| | |||||| |||||
Sbjct: 228 gtatgaggtacttccacaagctcagcaacaggttctacaccccgaccgtcaacgtcgaga 287
Query: 279 gcctctggtcgatggtgcccaccgacaaggcggcggaggccggcggcgacaaggccccgc 338
| |||||||| |||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 288 ggctctggtccatggtgccgtccgacaaggccgcggaggccggcggcgacaaggcccccg 347
Query: 339 agatcgacgtcacgcagttcggctacttcaaggtgctcgggaagggggtgctgccgccaa 398
|||||||| |||||||||||||||||||||||||||| |||||| |||||||| |
Sbjct: 348 tcgtcgacgtctcgcagttcggctacttcaaggtgctcggcaaggggatgctgccggaga 407
Query: 399 agcccattgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggcag 458
||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |
Sbjct: 408 agcccatcgtcgtcaaggccaagctcatctccaagatcgccgagaagaagatcaaggccg 467
Query: 459 caggcggcgccgtcgtgctcaccgcctagg 488
| |||||||| ||||||||| ||||||||
Sbjct: 468 ccggcggcgctgtcgtgctcgtcgcctagg 497
>gb|BQ462523.1|BQ462523 HI01C15T HI Hordeum vulgare subsp. vulgare cDNA clone HI01C15
5-PRIME, mRNA sequence
Length = 547
Score = 464 bits (234), Expect = e-129
Identities = 396/450 (88%)
Strand = Plus / Plus
Query: 39 cggcggcggcgatgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccg 98
|||||||||||||||| || ||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 45 cggcggcggcgatgacgacccgcctcaagaagaaccgcaagaagcgcggccacgtctccg 104
Query: 99 ccgggcacggccgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtg 158
|||||||||| || | ||||||||| | ||||| || ||||| |||||||||||||| |
Sbjct: 105 ccgggcacgggcgtgtgggcaagcaccgcaagcatcccggaggccgcggtaacgccggag 164
Query: 159 gcatgcaccaccaccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttg 218
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||| || |
Sbjct: 165 gcatgcaccaccaccgcatcctcttcgacaagtaccatcccggctacttcggcaaagtcg 224
Query: 219 gcatgcgttacttccataagctccgcaacaagttctactgccccgcggtcaacatcgagc 278
| ||| | |||||||| |||||| |||||| ||||||| ||| | |||||| |||||
Sbjct: 225 gtatgaggtacttccacaagctcagcaacaggttctacaccccgaccgtcaacgtcgaga 284
Query: 279 gcctctggtcgatggtgcccaccgacaaggcggcggaggccggcggcgacaaggccccgc 338
| |||||||| |||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 285 ggctctggtccatggtgccgtccgacaaggccgcggaggccggcggcgacaaggcccccg 344
Query: 339 agatcgacgtcacgcagttcggctacttcaaggtgctcgggaagggggtgctgccgccaa 398
|||||||| |||||||||||||||||||||||||||| |||||| |||||||| |
Sbjct: 345 tcgtcgacgtctcgcagttcggctacttcaaggtgctcggcaaggggatgctgccggaga 404
Query: 399 agcccattgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggcag 458
||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |
Sbjct: 405 agcccatcgtcgtcaaggccaagctcatctccaagatcgccgagaagaagatcaaggccg 464
Query: 459 caggcggcgccgtcgtgctcaccgcctagg 488
| |||||||| ||||||||| ||||||||
Sbjct: 465 ccggcggcgctgtcgtgctcgtcgcctagg 494
>gb|BQ464469.1|BQ464469 HF02F24r HF Hordeum vulgare subsp. vulgare cDNA clone HF02F24
5-PRIME, mRNA sequence
Length = 567
Score = 464 bits (234), Expect = e-129
Identities = 396/450 (88%)
Strand = Plus / Plus
Query: 39 cggcggcggcgatgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccg 98
|||||||||||||||| || ||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 47 cggcggcggcgatgacgacccgcctcaagaagaaccgcaagaagcgcggccacgtctccg 106
Query: 99 ccgggcacggccgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtg 158
|||||||||| || | ||||||||| | ||||| || ||||| |||||||||||||| |
Sbjct: 107 ccgggcacgggcgtgtgggcaagcaccgcaagcatcccggaggccgcggtaacgccggag 166
Query: 159 gcatgcaccaccaccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttg 218
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||| || |
Sbjct: 167 gcatgcaccaccaccgcatcctcttcgacaagtaccatcccggctacttcggcaaagtcg 226
Query: 219 gcatgcgttacttccataagctccgcaacaagttctactgccccgcggtcaacatcgagc 278
| ||| | |||||||| |||||| |||||| ||||||| ||| | |||||| |||||
Sbjct: 227 gtatgaggtacttccacaagctcagcaacaggttctacaccccgaccgtcaacgtcgaga 286
Query: 279 gcctctggtcgatggtgcccaccgacaaggcggcggaggccggcggcgacaaggccccgc 338
| |||||||| |||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 287 ggctctggtccatggtgccgtccgacaaggccgcggaggccggcggcgacaaggcccccg 346
Query: 339 agatcgacgtcacgcagttcggctacttcaaggtgctcgggaagggggtgctgccgccaa 398
|||||||| |||||||||||||||||||||||||||| |||||| |||||||| |
Sbjct: 347 tcgtcgacgtctcgcagttcggctacttcaaggtgctcggcaaggggatgctgccggaga 406
Query: 399 agcccattgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggcag 458
||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |
Sbjct: 407 agcccatcgtcgtcaaggccaagctcatctccaagatcgccgagaagaagatcaaggccg 466
Query: 459 caggcggcgccgtcgtgctcaccgcctagg 488
| |||||||| ||||||||| ||||||||
Sbjct: 467 ccggcggcgctgtcgtgctcgtcgcctagg 496
>gb|BQ464669.1|BQ464669 HF02O21r HF Hordeum vulgare subsp. vulgare cDNA clone HF02O21
5-PRIME, mRNA sequence
Length = 548
Score = 464 bits (234), Expect = e-129
Identities = 396/450 (88%)
Strand = Plus / Plus
Query: 39 cggcggcggcgatgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccg 98
|||||||||||||||| || ||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 47 cggcggcggcgatgacgacccgcctcaagaagaaccgcaagaagcgcggccacgtctccg 106
Query: 99 ccgggcacggccgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtg 158
|||||||||| || | ||||||||| | ||||| || ||||| |||||||||||||| |
Sbjct: 107 ccgggcacgggcgtgtgggcaagcaccgcaagcatcccggaggccgcggtaacgccggag 166
Query: 159 gcatgcaccaccaccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttg 218
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||| || |
Sbjct: 167 gcatgcaccaccaccgcatcctcttcgacaagtaccatcccggctacttcggcaaagtcg 226
Query: 219 gcatgcgttacttccataagctccgcaacaagttctactgccccgcggtcaacatcgagc 278
| ||| | |||||||| |||||| |||||| ||||||| ||| | |||||| |||||
Sbjct: 227 gtatgaggtacttccacaagctcagcaacaggttctacaccccgaccgtcaacgtcgaga 286
Query: 279 gcctctggtcgatggtgcccaccgacaaggcggcggaggccggcggcgacaaggccccgc 338
| |||||||| |||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 287 ggctctggtccatggtgccgtccgacaaggccgcggaggccggcggcgacaaggcccccg 346
Query: 339 agatcgacgtcacgcagttcggctacttcaaggtgctcgggaagggggtgctgccgccaa 398
|||||||| |||||||||||||||||||||||||||| |||||| |||||||| |
Sbjct: 347 tcgtcgacgtctcgcagttcggctacttcaaggtgctcggcaaggggatgctgccggaga 406
Query: 399 agcccattgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggcag 458
||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |
Sbjct: 407 agcccatcgtcgtcaaggccaagctcatctccaagatcgccgagaagaagatcaaggccg 466
Query: 459 caggcggcgccgtcgtgctcaccgcctagg 488
| |||||||| ||||||||| ||||||||
Sbjct: 467 ccggcggcgctgtcgtgctcgtcgcctagg 496
>gb|BQ466911.1|BQ466911 HS01P11T HS Hordeum vulgare subsp. vulgare cDNA clone HS01P11
5-PRIME, mRNA sequence
Length = 651
Score = 464 bits (234), Expect = e-129
Identities = 396/450 (88%)
Strand = Plus / Plus
Query: 39 cggcggcggcgatgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccg 98
|||||||||||||||| || ||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 65 cggcggcggcgatgacgacccgcctcaagaagaaccgcaagaagcgcggccacgtctccg 124
Query: 99 ccgggcacggccgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtg 158
|||||||||| || | ||||||||| | ||||| || ||||| |||||||||||||| |
Sbjct: 125 ccgggcacgggcgtgtgggcaagcaccgcaagcatcccggaggccgcggtaacgccggag 184
Query: 159 gcatgcaccaccaccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttg 218
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||| || |
Sbjct: 185 gcatgcaccaccaccgcatcctcttcgacaagtaccatcccggctacttcggcaaagtcg 244
Query: 219 gcatgcgttacttccataagctccgcaacaagttctactgccccgcggtcaacatcgagc 278
| ||| | |||||||| |||||| |||||| ||||||| ||| | |||||| |||||
Sbjct: 245 gtatgaggtacttccacaagctcagcaacaggttctacaccccgaccgtcaacgtcgaga 304
Query: 279 gcctctggtcgatggtgcccaccgacaaggcggcggaggccggcggcgacaaggccccgc 338
| |||||||| |||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 305 ggctctggtccatggtgccgtccgacaaggccgcggaggccggcggcgacaaggcccccg 364
Query: 339 agatcgacgtcacgcagttcggctacttcaaggtgctcgggaagggggtgctgccgccaa 398
|||||||| |||||||||||||||||||||||||||| |||||| |||||||| |
Sbjct: 365 tcgtcgacgtctcgcagttcggctacttcaaggtgctcggcaaggggatgctgccggaga 424
Query: 399 agcccattgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggcag 458
||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |
Sbjct: 425 agcccatcgtcgtcaaggccaagctcatctccaagatcgccgagaagaagatcaaggccg 484
Query: 459 caggcggcgccgtcgtgctcaccgcctagg 488
| |||||||| ||||||||| ||||||||
Sbjct: 485 ccggcggcgctgtcgtgctcgtcgcctagg 514
>gb|BQ467196.1|BQ467196 HS02P11r HS Hordeum vulgare subsp. vulgare cDNA clone HS02P11
5-PRIME, mRNA sequence
Length = 554
Score = 464 bits (234), Expect = e-129
Identities = 396/450 (88%)
Strand = Plus / Plus
Query: 39 cggcggcggcgatgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccg 98
|||||||||||||||| || ||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 65 cggcggcggcgatgacgacccgcctcaagaagaaccgcaagaagcgcggccacgtctccg 124
Query: 99 ccgggcacggccgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtg 158
|||||||||| || | ||||||||| | ||||| || ||||| |||||||||||||| |
Sbjct: 125 ccgggcacgggcgtgtgggcaagcaccgcaagcatcccggaggccgcggtaacgccggag 184
Query: 159 gcatgcaccaccaccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttg 218
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||| || |
Sbjct: 185 gcatgcaccaccaccgcatcctcttcgacaagtaccatcccggctacttcggcaaagtcg 244
Query: 219 gcatgcgttacttccataagctccgcaacaagttctactgccccgcggtcaacatcgagc 278
| ||| | |||||||| |||||| |||||| ||||||| ||| | |||||| |||||
Sbjct: 245 gtatgaggtacttccacaagctcagcaacaggttctacaccccgaccgtcaacgtcgaga 304
Query: 279 gcctctggtcgatggtgcccaccgacaaggcggcggaggccggcggcgacaaggccccgc 338
| |||||||| |||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 305 ggctctggtccatggtgccgtccgacaaggccgcggaggccggcggcgacaaggcccccg 364
Query: 339 agatcgacgtcacgcagttcggctacttcaaggtgctcgggaagggggtgctgccgccaa 398
|||||||| |||||||||||||||||||||||||||| |||||| |||||||| |
Sbjct: 365 tcgtcgacgtctcgcagttcggctacttcaaggtgctcggcaaggggatgctgccggaga 424
Query: 399 agcccattgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggcag 458
||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |
Sbjct: 425 agcccatcgtcgtcaaggccaagctcatctccaagatcgccgagaagaagatcaaggccg 484
Query: 459 caggcggcgccgtcgtgctcaccgcctagg 488
| |||||||| ||||||||| ||||||||
Sbjct: 485 ccggcggcgctgtcgtgctcgtcgcctagg 514
>gb|BQ472021.1|BQ472021 HV04C24r HV Hordeum vulgare subsp. vulgare cDNA clone HV04C24
5-PRIME, mRNA sequence
Length = 656
Score = 464 bits (234), Expect = e-129
Identities = 396/450 (88%)
Strand = Plus / Plus
Query: 39 cggcggcggcgatgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccg 98
|||||||||||||||| || ||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 52 cggcggcggcgatgacgacccgcctcaagaagaaccgcaagaagcgcggccacgtctccg 111
Query: 99 ccgggcacggccgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtg 158
|||||||||| || | ||||||||| | ||||| || ||||| |||||||||||||| |
Sbjct: 112 ccgggcacgggcgtgtgggcaagcaccgcaagcatcccggaggccgcggtaacgccggag 171
Query: 159 gcatgcaccaccaccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttg 218
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||| || |
Sbjct: 172 gcatgcaccaccaccgcatcctcttcgacaagtaccatcccggctacttcggcaaagtcg 231
Query: 219 gcatgcgttacttccataagctccgcaacaagttctactgccccgcggtcaacatcgagc 278
| ||| | |||||||| |||||| |||||| ||||||| ||| | |||||| |||||
Sbjct: 232 gtatgaggtacttccacaagctcagcaacaggttctacaccccgaccgtcaacgtcgaga 291
Query: 279 gcctctggtcgatggtgcccaccgacaaggcggcggaggccggcggcgacaaggccccgc 338
| |||||||| |||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 292 ggctctggtccatggtgccgtccgacaaggccgcggaggccggcggcgacaaggcccccg 351
Query: 339 agatcgacgtcacgcagttcggctacttcaaggtgctcgggaagggggtgctgccgccaa 398
|||||||| |||||||||||||||||||||||||||| |||||| |||||||| |
Sbjct: 352 tcgtcgacgtctcgcagttcggctacttcaaggtgctcggcaaggggatgctgccggaga 411
Query: 399 agcccattgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggcag 458
||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |
Sbjct: 412 agcccatcgtcgtcaaggccaagctcatctccaagatcgccgagaagaagatcaaggccg 471
Query: 459 caggcggcgccgtcgtgctcaccgcctagg 488
| |||||||| ||||||||| ||||||||
Sbjct: 472 ccggcggcgctgtcgtgctcgtcgcctagg 501
>gb|BM096577.2|BM096577 EBma05_SQ001_M17_R maternal, 12 DPA, no treatment, cv Optic, EBma05
Hordeum vulgare subsp. vulgare cDNA clone
EBma05_SQ001_M17 5', mRNA sequence
Length = 557
Score = 464 bits (234), Expect = e-129
Identities = 396/450 (88%)
Strand = Plus / Plus
Query: 39 cggcggcggcgatgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccg 98
|||||||||||||||| || ||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 62 cggcggcggcgatgacgacccgcctcaagaagaaccgcaagaagcgcggccacgtctccg 121
Query: 99 ccgggcacggccgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtg 158
|||||||||| || | ||||||||| | ||||| || ||||| |||||||||||||| |
Sbjct: 122 ccgggcacgggcgtgtgggcaagcaccgcaagcatcccggaggccgcggtaacgccggag 181
Query: 159 gcatgcaccaccaccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttg 218
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||| || |
Sbjct: 182 gcatgcaccaccaccgcatcctcttcgacaagtaccatcccggctacttcggcaaagtcg 241
Query: 219 gcatgcgttacttccataagctccgcaacaagttctactgccccgcggtcaacatcgagc 278
| ||| | |||||||| |||||| |||||| ||||||| ||| | |||||| |||||
Sbjct: 242 gtatgaggtacttccacaagctcagcaacaggttctacaccccgaccgtcaacgtcgaga 301
Query: 279 gcctctggtcgatggtgcccaccgacaaggcggcggaggccggcggcgacaaggccccgc 338
| |||||||| |||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 302 ggctctggtccatggtgccgtccgacaaggccgcggaggccggcggcgacaaggcccccg 361
Query: 339 agatcgacgtcacgcagttcggctacttcaaggtgctcgggaagggggtgctgccgccaa 398
|||||||| |||||||||||||||||||||||||||| |||||| |||||||| |
Sbjct: 362 tcgtcgacgtctcgcagttcggctacttcaaggtgctcggcaaggggatgctgccggaga 421
Query: 399 agcccattgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggcag 458
||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |
Sbjct: 422 agcccatcgtcgtcaaggccaagctcatctccaagatcgccgagaagaagatcaaggccg 481
Query: 459 caggcggcgccgtcgtgctcaccgcctagg 488
| |||||||| ||||||||| ||||||||
Sbjct: 482 ccggcggcgctgtcgtgctcgtcgcctagg 511
>gb|BM101069.2|BM101069 EBpi01_SQ002_M15_R pistil, 1 DPA, no treatment, cv Optic, EBpi01
Hordeum vulgare subsp. vulgare cDNA clone
EBpi01_SQ002_M15 5', mRNA sequence
Length = 588
Score = 464 bits (234), Expect = e-129
Identities = 396/450 (88%)
Strand = Plus / Plus
Query: 39 cggcggcggcgatgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccg 98
|||||||||||||||| || ||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 52 cggcggcggcgatgacgacccgcctcaagaagaaccgcaagaagcgcggccacgtctccg 111
Query: 99 ccgggcacggccgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtg 158
|||||||||| || | ||||||||| | ||||| || ||||| |||||||||||||| |
Sbjct: 112 ccgggcacgggcgtgtgggcaagcaccgcaagcatcccggaggccgcggtaacgccggag 171
Query: 159 gcatgcaccaccaccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttg 218
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||| || |
Sbjct: 172 gcatgcaccaccaccgcatcctcttcgacaagtaccatcccggctacttcggcaaagtcg 231
Query: 219 gcatgcgttacttccataagctccgcaacaagttctactgccccgcggtcaacatcgagc 278
| ||| | |||||||| |||||| |||||| ||||||| ||| | |||||| |||||
Sbjct: 232 gtatgaggtacttccacaagctcagcaacaggttctacaccccgaccgtcaacgtcgaga 291
Query: 279 gcctctggtcgatggtgcccaccgacaaggcggcggaggccggcggcgacaaggccccgc 338
| |||||||| |||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 292 ggctctggtccatggtgccgtccgacaaggccgcggaggccggcggcgacaaggcccccg 351
Query: 339 agatcgacgtcacgcagttcggctacttcaaggtgctcgggaagggggtgctgccgccaa 398
|||||||| |||||||||||||||||||||||||||| |||||| |||||||| |
Sbjct: 352 tcgtcgacgtctcgcagttcggctacttcaaggtgctcggcaaggggatgctgccggaga 411
Query: 399 agcccattgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggcag 458
||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |
Sbjct: 412 agcccatcgtcgtcaaggccaagctcatctccaagatcgccgagaagaagatcaaggccg 471
Query: 459 caggcggcgccgtcgtgctcaccgcctagg 488
| |||||||| ||||||||| ||||||||
Sbjct: 472 ccggcggcgctgtcgtgctcgtcgcctagg 501
>gb|BM370624.2|BM370624 EBro08_SQ004_M12_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ004_M12 5', mRNA sequence
Length = 661
Score = 464 bits (234), Expect = e-129
Identities = 396/450 (88%)
Strand = Plus / Plus
Query: 39 cggcggcggcgatgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccg 98
|||||||||||||||| || ||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 38 cggcggcggcgatgacgacccgcctcaagaagaaccgcaagaagcgcggccacgtctccg 97
Query: 99 ccgggcacggccgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtg 158
|||||||||| || | ||||||||| | ||||| || ||||| |||||||||||||| |
Sbjct: 98 ccgggcacgggcgtgtgggcaagcaccgcaagcatcccggaggccgcggtaacgccggag 157
Query: 159 gcatgcaccaccaccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttg 218
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||| || |
Sbjct: 158 gcatgcaccaccaccgcatcctcttcgacaagtaccatcccggctacttcggcaaagtcg 217
Query: 219 gcatgcgttacttccataagctccgcaacaagttctactgccccgcggtcaacatcgagc 278
| ||| | |||||||| |||||| |||||| ||||||| ||| | |||||| |||||
Sbjct: 218 gtatgaggtacttccacaagctcagcaacaggttctacaccccgaccgtcaacgtcgaga 277
Query: 279 gcctctggtcgatggtgcccaccgacaaggcggcggaggccggcggcgacaaggccccgc 338
| |||||||| |||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 278 ggctctggtccatggtgccgtccgacaaggccgcggaggccggcggcgacaaggcccccg 337
Query: 339 agatcgacgtcacgcagttcggctacttcaaggtgctcgggaagggggtgctgccgccaa 398
|||||||| |||||||||||||||||||||||||||| |||||| |||||||| |
Sbjct: 338 tcgtcgacgtctcgcagttcggctacttcaaggtgctcggcaaggggatgctgccggaga 397
Query: 399 agcccattgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggcag 458
||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |
Sbjct: 398 agcccatcgtcgtcaaggccaagctcatctccaagatcgccgagaagaagatcaaggccg 457
Query: 459 caggcggcgccgtcgtgctcaccgcctagg 488
| |||||||| ||||||||| ||||||||
Sbjct: 458 ccggcggcgctgtcgtgctcgtcgcctagg 487
>gb|BQ761977.1|BQ761977 EBpi01_SQ005_N12_R pistil, 1 DPA, no treatment, cv Optic, EBpi01
Hordeum vulgare subsp. vulgare cDNA clone
EBpi01_SQ005_N12 5', mRNA sequence
Length = 548
Score = 464 bits (234), Expect = e-129
Identities = 396/450 (88%)
Strand = Plus / Plus
Query: 39 cggcggcggcgatgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccg 98
|||||||||||||||| || ||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 52 cggcggcggcgatgacgacccgcctcaagaagaaccgcaagaagcgcggccacgtctccg 111
Query: 99 ccgggcacggccgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtg 158
|||||||||| || | ||||||||| | ||||| || ||||| |||||||||||||| |
Sbjct: 112 ccgggcacgggcgtgtgggcaagcaccgcaagcatcccggaggccgcggtaacgccggag 171
Query: 159 gcatgcaccaccaccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttg 218
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||| || |
Sbjct: 172 gcatgcaccaccaccgcatcctcttcgacaagtaccatcccggctacttcggcaaagtcg 231
Query: 219 gcatgcgttacttccataagctccgcaacaagttctactgccccgcggtcaacatcgagc 278
| ||| | |||||||| |||||| |||||| ||||||| ||| | |||||| |||||
Sbjct: 232 gtatgaggtacttccacaagctcagcaacaggttctacaccccgaccgtcaacgtcgaga 291
Query: 279 gcctctggtcgatggtgcccaccgacaaggcggcggaggccggcggcgacaaggccccgc 338
| |||||||| |||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 292 ggctctggtccatggtgccgtccgacaaggccgcggaggccggcggcgacaaggcccccg 351
Query: 339 agatcgacgtcacgcagttcggctacttcaaggtgctcgggaagggggtgctgccgccaa 398
|||||||| |||||||||||||||||||||||||||| |||||| |||||||| |
Sbjct: 352 tcgtcgacgtctcgcagttcggctacttcaaggtgctcggcaaggggatgctgccggaga 411
Query: 399 agcccattgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggcag 458
||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |
Sbjct: 412 agcccatcgtcgtcaaggccaagctcatctccaagatcgccgagaagaagatcaaggccg 471
Query: 459 caggcggcgccgtcgtgctcaccgcctagg 488
| |||||||| ||||||||| ||||||||
Sbjct: 472 ccggcggcgctgtcgtgctcgtcgcctagg 501
>gb|BQ765267.1|BQ765267 EBro03_SQ006_N16_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ006_N16 5', mRNA sequence
Length = 611
Score = 464 bits (234), Expect = e-129
Identities = 396/450 (88%)
Strand = Plus / Plus
Query: 39 cggcggcggcgatgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccg 98
|||||||||||||||| || ||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 2 cggcggcggcgatgacgacccgcctcaagaagaaccgcaagaagcgcggccacgtctccg 61
Query: 99 ccgggcacggccgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtg 158
|||||||||| || | ||||||||| | ||||| || ||||| |||||||||||||| |
Sbjct: 62 ccgggcacgggcgtgtgggcaagcaccgcaagcatcccggaggccgcggtaacgccggag 121
Query: 159 gcatgcaccaccaccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttg 218
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||| || |
Sbjct: 122 gcatgcaccaccaccgcatcctcttcgacaagtaccatcccggctacttcggcaaagtcg 181
Query: 219 gcatgcgttacttccataagctccgcaacaagttctactgccccgcggtcaacatcgagc 278
| ||| | |||||||| |||||| |||||| ||||||| ||| | |||||| |||||
Sbjct: 182 gtatgaggtacttccacaagctcagcaacaggttctacaccccgaccgtcaacgtcgaga 241
Query: 279 gcctctggtcgatggtgcccaccgacaaggcggcggaggccggcggcgacaaggccccgc 338
| |||||||| |||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 242 ggctctggtccatggtgccgtccgacaaggccgcggaggccggcggcgacaaggcccccg 301
Query: 339 agatcgacgtcacgcagttcggctacttcaaggtgctcgggaagggggtgctgccgccaa 398
|||||||| |||||||||||||||||||||||||||| |||||| |||||||| |
Sbjct: 302 tcgtcgacgtctcgcagttcggctacttcaaggtgctcggcaaggggatgctgccggaga 361
Query: 399 agcccattgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggcag 458
||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |
Sbjct: 362 agcccatcgtcgtcaaggccaagctcatctccaagatcgccgagaagaagatcaaggccg 421
Query: 459 caggcggcgccgtcgtgctcaccgcctagg 488
| |||||||| ||||||||| ||||||||
Sbjct: 422 ccggcggcgctgtcgtgctcgtcgcctagg 451
>gb|BU976684.1|BU976684 HA10B23r HA Hordeum vulgare subsp. vulgare cDNA clone HA10B23
5-PRIME, mRNA sequence
Length = 530
Score = 464 bits (234), Expect = e-129
Identities = 396/450 (88%)
Strand = Plus / Plus
Query: 39 cggcggcggcgatgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccg 98
|||||||||||||||| || ||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 28 cggcggcggcgatgacgacccgcctcaagaagaaccgcaagaagcgcggccacgtctccg 87
Query: 99 ccgggcacggccgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtg 158
|||||||||| || | ||||||||| | ||||| || ||||| |||||||||||||| |
Sbjct: 88 ccgggcacgggcgtgtgggcaagcaccgcaagcatcccggaggccgcggtaacgccggag 147
Query: 159 gcatgcaccaccaccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttg 218
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||| || |
Sbjct: 148 gcatgcaccaccaccgcatcctcttcgacaagtaccatcccggctacttcggcaaagtcg 207
Query: 219 gcatgcgttacttccataagctccgcaacaagttctactgccccgcggtcaacatcgagc 278
| ||| | |||||||| |||||| |||||| ||||||| ||| | |||||| |||||
Sbjct: 208 gtatgaggtacttccacaagctcagcaacaggttctacaccccgaccgtcaacgtcgaga 267
Query: 279 gcctctggtcgatggtgcccaccgacaaggcggcggaggccggcggcgacaaggccccgc 338
| |||||||| |||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 268 ggctctggtccatggtgccgtccgacaaggccgcggaggccggcggcgacaaggcccccg 327
Query: 339 agatcgacgtcacgcagttcggctacttcaaggtgctcgggaagggggtgctgccgccaa 398
|||||||| |||||||||||||||||||||||||||| |||||| |||||||| |
Sbjct: 328 tcgtcgacgtctcgcagttcggctacttcaaggtgctcggcaaggggatgctgccggaga 387
Query: 399 agcccattgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggcag 458
||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |
Sbjct: 388 agcccatcgtcgtcaaggccaagctcatctccaagatcgccgagaagaagatcaaggccg 447
Query: 459 caggcggcgccgtcgtgctcaccgcctagg 488
| |||||||| ||||||||| ||||||||
Sbjct: 448 ccggcggcgctgtcgtgctcgtcgcctagg 477
>gb|BU977306.1|BU977306 HA11D05r HA Hordeum vulgare subsp. vulgare cDNA clone HA11D05
5-PRIME, mRNA sequence
Length = 606
Score = 464 bits (234), Expect = e-129
Identities = 396/450 (88%)
Strand = Plus / Plus
Query: 39 cggcggcggcgatgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccg 98
|||||||||||||||| || ||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 52 cggcggcggcgatgacgacccgcctcaagaagaaccgcaagaagcgcggccacgtctccg 111
Query: 99 ccgggcacggccgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtg 158
|||||||||| || | ||||||||| | ||||| || ||||| |||||||||||||| |
Sbjct: 112 ccgggcacgggcgtgtgggcaagcaccgcaagcatcccggaggccgcggtaacgccggag 171
Query: 159 gcatgcaccaccaccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttg 218
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||| || |
Sbjct: 172 gcatgcaccaccaccgcatcctcttcgacaagtaccatcccggctacttcggcaaagtcg 231
Query: 219 gcatgcgttacttccataagctccgcaacaagttctactgccccgcggtcaacatcgagc 278
| ||| | |||||||| |||||| |||||| ||||||| ||| | |||||| |||||
Sbjct: 232 gtatgaggtacttccacaagctcagcaacaggttctacaccccgaccgtcaacgtcgaga 291
Query: 279 gcctctggtcgatggtgcccaccgacaaggcggcggaggccggcggcgacaaggccccgc 338
| |||||||| |||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 292 ggctctggtccatggtgccgtccgacaaggccgcggaggccggcggcgacaaggcccccg 351
Query: 339 agatcgacgtcacgcagttcggctacttcaaggtgctcgggaagggggtgctgccgccaa 398
|||||||| |||||||||||||||||||||||||||| |||||| |||||||| |
Sbjct: 352 tcgtcgacgtctcgcagttcggctacttcaaggtgctcggcaaggggatgctgccggaga 411
Query: 399 agcccattgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggcag 458
||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |
Sbjct: 412 agcccatcgtcgtcaaggccaagctcatctccaagatcgccgagaagaagatcaaggccg 471
Query: 459 caggcggcgccgtcgtgctcaccgcctagg 488
| |||||||| ||||||||| ||||||||
Sbjct: 472 ccggcggcgctgtcgtgctcgtcgcctagg 501
>gb|BU978130.1|BU978130 HA12K04r HA Hordeum vulgare subsp. vulgare cDNA clone HA12K04
5-PRIME, mRNA sequence
Length = 568
Score = 464 bits (234), Expect = e-129
Identities = 396/450 (88%)
Strand = Plus / Plus
Query: 39 cggcggcggcgatgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccg 98
|||||||||||||||| || ||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 58 cggcggcggcgatgacgacccgcctcaagaagaaccgcaagaagcgcggccacgtctccg 117
Query: 99 ccgggcacggccgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtg 158
|||||||||| || | ||||||||| | ||||| || ||||| |||||||||||||| |
Sbjct: 118 ccgggcacgggcgtgtgggcaagcaccgcaagcatcccggaggccgcggtaacgccggag 177
Query: 159 gcatgcaccaccaccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttg 218
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||| || |
Sbjct: 178 gcatgcaccaccaccgcatcctcttcgacaagtaccatcccggctacttcggcaaagtcg 237
Query: 219 gcatgcgttacttccataagctccgcaacaagttctactgccccgcggtcaacatcgagc 278
| ||| | |||||||| |||||| |||||| ||||||| ||| | |||||| |||||
Sbjct: 238 gtatgaggtacttccacaagctcagcaacaggttctacaccccgaccgtcaacgtcgaga 297
Query: 279 gcctctggtcgatggtgcccaccgacaaggcggcggaggccggcggcgacaaggccccgc 338
| |||||||| |||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 298 ggctctggtccatggtgccgtccgacaaggccgcggaggccggcggcgacaaggcccccg 357
Query: 339 agatcgacgtcacgcagttcggctacttcaaggtgctcgggaagggggtgctgccgccaa 398
|||||||| |||||||||||||||||||||||||||| |||||| |||||||| |
Sbjct: 358 tcgtcgacgtctcgcagttcggctacttcaaggtgctcggcaaggggatgctgccggaga 417
Query: 399 agcccattgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggcag 458
||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |
Sbjct: 418 agcccatcgtcgtcaaggccaagctcatctccaagatcgccgagaagaagatcaaggccg 477
Query: 459 caggcggcgccgtcgtgctcaccgcctagg 488
| |||||||| ||||||||| ||||||||
Sbjct: 478 ccggcggcgctgtcgtgctcgtcgcctagg 507
>gb|BU983445.1|BU983445 HA29M05r HA Hordeum vulgare subsp. vulgare cDNA clone HA29M05
5-PRIME, mRNA sequence
Length = 550
Score = 464 bits (234), Expect = e-129
Identities = 396/450 (88%)
Strand = Plus / Plus
Query: 39 cggcggcggcgatgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccg 98
|||||||||||||||| || ||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 49 cggcggcggcgatgacgacccgcctcaagaagaaccgcaagaagcgcggccacgtctccg 108
Query: 99 ccgggcacggccgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtg 158
|||||||||| || | ||||||||| | ||||| || ||||| |||||||||||||| |
Sbjct: 109 ccgggcacgggcgtgtgggcaagcaccgcaagcatcccggaggccgcggtaacgccggag 168
Query: 159 gcatgcaccaccaccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttg 218
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||| || |
Sbjct: 169 gcatgcaccaccaccgcatcctcttcgacaagtaccatcccggctacttcggcaaagtcg 228
Query: 219 gcatgcgttacttccataagctccgcaacaagttctactgccccgcggtcaacatcgagc 278
| ||| | |||||||| |||||| |||||| ||||||| ||| | |||||| |||||
Sbjct: 229 gtatgaggtacttccacaagctcagcaacaggttctacaccccgaccgtcaacgtcgaga 288
Query: 279 gcctctggtcgatggtgcccaccgacaaggcggcggaggccggcggcgacaaggccccgc 338
| |||||||| |||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 289 ggctctggtccatggtgccgtccgacaaggccgcggaggccggcggcgacaaggcccccg 348
Query: 339 agatcgacgtcacgcagttcggctacttcaaggtgctcgggaagggggtgctgccgccaa 398
|||||||| |||||||||||||||||||||||||||| |||||| |||||||| |
Sbjct: 349 tcgtcgacgtctcgcagttcggctacttcaaggtgctcggcaaggggatgctgccggaga 408
Query: 399 agcccattgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggcag 458
||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |
Sbjct: 409 agcccatcgtcgtcaaggccaagctcatctccaagatcgccgagaagaagatcaaggccg 468
Query: 459 caggcggcgccgtcgtgctcaccgcctagg 488
| |||||||| ||||||||| ||||||||
Sbjct: 469 ccggcggcgctgtcgtgctcgtcgcctagg 498
>gb|BU983658.1|BU983658 HA30H20r HA Hordeum vulgare subsp. vulgare cDNA clone HA30H20
5-PRIME, mRNA sequence
Length = 506
Score = 464 bits (234), Expect = e-129
Identities = 396/450 (88%)
Strand = Plus / Plus
Query: 39 cggcggcggcgatgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccg 98
|||||||||||||||| || ||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 5 cggcggcggcgatgacgacccgcctcaagaagaaccgcaagaagcgcggccacgtctccg 64
Query: 99 ccgggcacggccgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtg 158
|||||||||| || | ||||||||| | ||||| || ||||| |||||||||||||| |
Sbjct: 65 ccgggcacgggcgtgtgggcaagcaccgcaagcatcccggaggccgcggtaacgccggag 124
Query: 159 gcatgcaccaccaccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttg 218
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||| || |
Sbjct: 125 gcatgcaccaccaccgcatcctcttcgacaagtaccatcccggctacttcggcaaagtcg 184
Query: 219 gcatgcgttacttccataagctccgcaacaagttctactgccccgcggtcaacatcgagc 278
| ||| | |||||||| |||||| |||||| ||||||| ||| | |||||| |||||
Sbjct: 185 gtatgaggtacttccacaagctcagcaacaggttctacaccccgaccgtcaacgtcgaga 244
Query: 279 gcctctggtcgatggtgcccaccgacaaggcggcggaggccggcggcgacaaggccccgc 338
| |||||||| |||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 245 ggctctggtccatggtgccgtccgacaaggccgcggaggccggcggcgacaaggcccccg 304
Query: 339 agatcgacgtcacgcagttcggctacttcaaggtgctcgggaagggggtgctgccgccaa 398
|||||||| |||||||||||||||||||||||||||| |||||| |||||||| |
Sbjct: 305 tcgtcgacgtctcgcagttcggctacttcaaggtgctcggcaaggggatgctgccggaga 364
Query: 399 agcccattgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggcag 458
||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |
Sbjct: 365 agcccatcgtcgtcaaggccaagctcatctccaagatcgccgagaagaagatcaaggccg 424
Query: 459 caggcggcgccgtcgtgctcaccgcctagg 488
| |||||||| ||||||||| ||||||||
Sbjct: 425 ccggcggcgctgtcgtgctcgtcgcctagg 454
>gb|BU983953.1|BU983953 HA31I18r HA Hordeum vulgare subsp. vulgare cDNA clone HA31I18
5-PRIME, mRNA sequence
Length = 559
Score = 464 bits (234), Expect = e-129
Identities = 396/450 (88%)
Strand = Plus / Plus
Query: 39 cggcggcggcgatgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccg 98
|||||||||||||||| || ||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 58 cggcggcggcgatgacgacccgcctcaagaagaaccgcaagaagcgcggccacgtctccg 117
Query: 99 ccgggcacggccgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtg 158
|||||||||| || | ||||||||| | ||||| || ||||| |||||||||||||| |
Sbjct: 118 ccgggcacgggcgtgtgggcaagcaccgcaagcatcccggaggccgcggtaacgccggag 177
Query: 159 gcatgcaccaccaccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttg 218
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||| || |
Sbjct: 178 gcatgcaccaccaccgcatcctcttcgacaagtaccatcccggctacttcggcaaagtcg 237
Query: 219 gcatgcgttacttccataagctccgcaacaagttctactgccccgcggtcaacatcgagc 278
| ||| | |||||||| |||||| |||||| ||||||| ||| | |||||| |||||
Sbjct: 238 gtatgaggtacttccacaagctcagcaacaggttctacaccccgaccgtcaacgtcgaga 297
Query: 279 gcctctggtcgatggtgcccaccgacaaggcggcggaggccggcggcgacaaggccccgc 338
| |||||||| |||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 298 ggctctggtccatggtgccgtccgacaaggccgcggaggccggcggcgacaaggcccccg 357
Query: 339 agatcgacgtcacgcagttcggctacttcaaggtgctcgggaagggggtgctgccgccaa 398
|||||||| |||||||||||||||||||||||||||| |||||| |||||||| |
Sbjct: 358 tcgtcgacgtctcgcagttcggctacttcaaggtgctcggcaaggggatgctgccggaga 417
Query: 399 agcccattgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggcag 458
||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |
Sbjct: 418 agcccatcgtcgtcaaggccaagctcatctccaagatcgccgagaagaagatcaaggccg 477
Query: 459 caggcggcgccgtcgtgctcaccgcctagg 488
| |||||||| ||||||||| ||||||||
Sbjct: 478 ccggcggcgctgtcgtgctcgtcgcctagg 507
>gb|BU994920.1|BU994920 HM08J23r HM Hordeum vulgare subsp. vulgare cDNA clone HM08J23
5-PRIME, mRNA sequence
Length = 639
Score = 464 bits (234), Expect = e-129
Identities = 396/450 (88%)
Strand = Plus / Plus
Query: 39 cggcggcggcgatgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccg 98
|||||||||||||||| || ||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 40 cggcggcggcgatgacgacccgcctcaagaagaaccgcaagaagcgcggccacgtctccg 99
Query: 99 ccgggcacggccgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtg 158
|||||||||| || | ||||||||| | ||||| || ||||| |||||||||||||| |
Sbjct: 100 ccgggcacgggcgtgtgggcaagcaccgcaagcatcccggaggccgcggtaacgccggag 159
Query: 159 gcatgcaccaccaccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttg 218
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||| || |
Sbjct: 160 gcatgcaccaccaccgcatcctcttcgacaagtaccatcccggctacttcggcaaagtcg 219
Query: 219 gcatgcgttacttccataagctccgcaacaagttctactgccccgcggtcaacatcgagc 278
| ||| | |||||||| |||||| |||||| ||||||| ||| | |||||| |||||
Sbjct: 220 gtatgaggtacttccacaagctcagcaacaggttctacaccccgaccgtcaacgtcgaga 279
Query: 279 gcctctggtcgatggtgcccaccgacaaggcggcggaggccggcggcgacaaggccccgc 338
| |||||||| |||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 280 ggctctggtccatggtgccgtccgacaaggccgcggaggccggcggcgacaaggcccccg 339
Query: 339 agatcgacgtcacgcagttcggctacttcaaggtgctcgggaagggggtgctgccgccaa 398
|||||||| |||||||||||||||||||||||||||| |||||| |||||||| |
Sbjct: 340 tcgtcgacgtctcgcagttcggctacttcaaggtgctcggcaaggggatgctgccggaga 399
Query: 399 agcccattgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggcag 458
||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |
Sbjct: 400 agcccatcgtcgtcaaggccaagctcatctccaagatcgccgagaagaagatcaaggccg 459
Query: 459 caggcggcgccgtcgtgctcaccgcctagg 488
| |||||||| ||||||||| ||||||||
Sbjct: 460 ccggcggcgctgtcgtgctcgtcgcctagg 489
>gb|BU995159.1|BU995159 HM09G09r HM Hordeum vulgare subsp. vulgare cDNA clone HM09G09
5-PRIME, mRNA sequence
Length = 638
Score = 464 bits (234), Expect = e-129
Identities = 396/450 (88%)
Strand = Plus / Plus
Query: 39 cggcggcggcgatgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccg 98
|||||||||||||||| || ||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 63 cggcggcggcgatgacgacccgcctcaagaagaaccgcaagaagcgcggccacgtctccg 122
Query: 99 ccgggcacggccgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtg 158
|||||||||| || | ||||||||| | ||||| || ||||| |||||||||||||| |
Sbjct: 123 ccgggcacgggcgtgtgggcaagcaccgcaagcatcccggaggccgcggtaacgccggag 182
Query: 159 gcatgcaccaccaccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttg 218
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||| || |
Sbjct: 183 gcatgcaccaccaccgcatcctcttcgacaagtaccatcccggctacttcggcaaagtcg 242
Query: 219 gcatgcgttacttccataagctccgcaacaagttctactgccccgcggtcaacatcgagc 278
| ||| | |||||||| |||||| |||||| ||||||| ||| | |||||| |||||
Sbjct: 243 gtatgaggtacttccacaagctcagcaacaggttctacaccccgaccgtcaacgtcgaga 302
Query: 279 gcctctggtcgatggtgcccaccgacaaggcggcggaggccggcggcgacaaggccccgc 338
| |||||||| |||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 303 ggctctggtccatggtgccgtccgacaaggccgcggaggccggcggcgacaaggcccccg 362
Query: 339 agatcgacgtcacgcagttcggctacttcaaggtgctcgggaagggggtgctgccgccaa 398
|||||||| |||||||||||||||||||||||||||| |||||| |||||||| |
Sbjct: 363 tcgtcgacgtctcgcagttcggctacttcaaggtgctcggcaaggggatgctgccggaga 422
Query: 399 agcccattgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggcag 458
||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |
Sbjct: 423 agcccatcgtcgtcaaggccaagctcatctccaagatcgccgagaagaagatcaaggccg 482
Query: 459 caggcggcgccgtcgtgctcaccgcctagg 488
| |||||||| ||||||||| ||||||||
Sbjct: 483 ccggcggcgctgtcgtgctcgtcgcctagg 512
>gb|BU995572.1|BU995572 HM10K13r HM Hordeum vulgare subsp. vulgare cDNA clone HM10K13
5-PRIME, mRNA sequence
Length = 605
Score = 464 bits (234), Expect = e-129
Identities = 396/450 (88%)
Strand = Plus / Plus
Query: 39 cggcggcggcgatgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccg 98
|||||||||||||||| || ||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 51 cggcggcggcgatgacgacccgcctcaagaagaaccgcaagaagcgcggccacgtctccg 110
Query: 99 ccgggcacggccgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtg 158
|||||||||| || | ||||||||| | ||||| || ||||| |||||||||||||| |
Sbjct: 111 ccgggcacgggcgtgtgggcaagcaccgcaagcatcccggaggccgcggtaacgccggag 170
Query: 159 gcatgcaccaccaccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttg 218
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||| || |
Sbjct: 171 gcatgcaccaccaccgcatcctcttcgacaagtaccatcccggctacttcggcaaagtcg 230
Query: 219 gcatgcgttacttccataagctccgcaacaagttctactgccccgcggtcaacatcgagc 278
| ||| | |||||||| |||||| |||||| ||||||| ||| | |||||| |||||
Sbjct: 231 gtatgaggtacttccacaagctcagcaacaggttctacaccccgaccgtcaacgtcgaga 290
Query: 279 gcctctggtcgatggtgcccaccgacaaggcggcggaggccggcggcgacaaggccccgc 338
| |||||||| |||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 291 ggctctggtccatggtgccgtccgacaaggccgcggaggccggcggcgacaaggcccccg 350
Query: 339 agatcgacgtcacgcagttcggctacttcaaggtgctcgggaagggggtgctgccgccaa 398
|||||||| |||||||||||||||||||||||||||| |||||| |||||||| |
Sbjct: 351 tcgtcgacgtctcgcagttcggctacttcaaggtgctcggcaaggggatgctgccggaga 410
Query: 399 agcccattgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggcag 458
||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |
Sbjct: 411 agcccatcgtcgtcaaggccaagctcatctccaagatcgccgagaagaagatcaaggccg 470
Query: 459 caggcggcgccgtcgtgctcaccgcctagg 488
| |||||||| ||||||||| ||||||||
Sbjct: 471 ccggcggcgctgtcgtgctcgtcgcctagg 500
>gb|BU997859.1|BU997859 HI09D19r HI Hordeum vulgare subsp. vulgare cDNA clone HI09D19
5-PRIME, mRNA sequence
Length = 571
Score = 464 bits (234), Expect = e-129
Identities = 396/450 (88%)
Strand = Plus / Plus
Query: 39 cggcggcggcgatgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccg 98
|||||||||||||||| || ||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 52 cggcggcggcgatgacgacccgcctcaagaagaaccgcaagaagcgcggccacgtctccg 111
Query: 99 ccgggcacggccgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtg 158
|||||||||| || | ||||||||| | ||||| || ||||| |||||||||||||| |
Sbjct: 112 ccgggcacgggcgtgtgggcaagcaccgcaagcatcccggaggccgcggtaacgccggag 171
Query: 159 gcatgcaccaccaccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttg 218
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||| || |
Sbjct: 172 gcatgcaccaccaccgcatcctcttcgacaagtaccatcccggctacttcggcaaagtcg 231
Query: 219 gcatgcgttacttccataagctccgcaacaagttctactgccccgcggtcaacatcgagc 278
| ||| | |||||||| |||||| |||||| ||||||| ||| | |||||| |||||
Sbjct: 232 gtatgaggtacttccacaagctcagcaacaggttctacaccccgaccgtcaacgtcgaga 291
Query: 279 gcctctggtcgatggtgcccaccgacaaggcggcggaggccggcggcgacaaggccccgc 338
| |||||||| |||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 292 ggctctggtccatggtgccgtccgacaaggccgcggaggccggcggcgacaaggcccccg 351
Query: 339 agatcgacgtcacgcagttcggctacttcaaggtgctcgggaagggggtgctgccgccaa 398
|||||||| |||||||||||||||||||||||||||| |||||| |||||||| |
Sbjct: 352 tcgtcgacgtctcgcagttcggctacttcaaggtgctcggcaaggggatgctgccggaga 411
Query: 399 agcccattgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggcag 458
||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |
Sbjct: 412 agcccatcgtcgtcaaggccaagctcatctccaagatcgccgagaagaagatcaaggccg 471
Query: 459 caggcggcgccgtcgtgctcaccgcctagg 488
| |||||||| ||||||||| ||||||||
Sbjct: 472 ccggcggcgctgtcgtgctcgtcgcctagg 501
>gb|CA003127.1|CA003127 HS09H24r HS Hordeum vulgare subsp. vulgare cDNA clone HS09H24
5-PRIME, mRNA sequence
Length = 546
Score = 464 bits (234), Expect = e-129
Identities = 396/450 (88%)
Strand = Plus / Plus
Query: 39 cggcggcggcgatgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccg 98
|||||||||||||||| || ||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 55 cggcggcggcgatgacgacccgcctcaagaagaaccgcaagaagcgcggccacgtctccg 114
Query: 99 ccgggcacggccgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtg 158
|||||||||| || | ||||||||| | ||||| || ||||| |||||||||||||| |
Sbjct: 115 ccgggcacgggcgtgtgggcaagcaccgcaagcatcccggaggccgcggtaacgccggag 174
Query: 159 gcatgcaccaccaccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttg 218
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||| || |
Sbjct: 175 gcatgcaccaccaccgcatcctcttcgacaagtaccatcccggctacttcggcaaagtcg 234
Query: 219 gcatgcgttacttccataagctccgcaacaagttctactgccccgcggtcaacatcgagc 278
| ||| | |||||||| |||||| |||||| ||||||| ||| | |||||| |||||
Sbjct: 235 gtatgaggtacttccacaagctcagcaacaggttctacaccccgaccgtcaacgtcgaga 294
Query: 279 gcctctggtcgatggtgcccaccgacaaggcggcggaggccggcggcgacaaggccccgc 338
| |||||||| |||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 295 ggctctggtccatggtgccgtccgacaaggccgcggaggccggcggcgacaaggcccccg 354
Query: 339 agatcgacgtcacgcagttcggctacttcaaggtgctcgggaagggggtgctgccgccaa 398
|||||||| |||||||||||||||||||||||||||| |||||| |||||||| |
Sbjct: 355 tcgtcgacgtctcgcagttcggctacttcaaggtgctcggcaaggggatgctgccggaga 414
Query: 399 agcccattgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggcag 458
||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |
Sbjct: 415 agcccatcgtcgtcaaggccaagctcatctccaagatcgccgagaagaagatcaaggccg 474
Query: 459 caggcggcgccgtcgtgctcaccgcctagg 488
| |||||||| ||||||||| ||||||||
Sbjct: 475 ccggcggcgctgtcgtgctcgtcgcctagg 504
>gb|CA021554.1|CA021554 HZ40G24r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ40G24
5-PRIME, mRNA sequence
Length = 519
Score = 464 bits (234), Expect = e-129
Identities = 396/450 (88%)
Strand = Plus / Plus
Query: 39 cggcggcggcgatgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccg 98
|||||||||||||||| || ||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 66 cggcggcggcgatgacgacccgcctcaagaagaaccgcaagaagcgcggccacgtctccg 125
Query: 99 ccgggcacggccgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtg 158
|||||||||| || | ||||||||| | ||||| || ||||| |||||||||||||| |
Sbjct: 126 ccgggcacgggcgtgtgggcaagcaccgcaagcatcccggaggccgcggtaacgccggag 185
Query: 159 gcatgcaccaccaccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttg 218
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||| || |
Sbjct: 186 gcatgcaccaccaccgcatcctcttcgacaagtaccatcccggctacttcggcaaagtcg 245
Query: 219 gcatgcgttacttccataagctccgcaacaagttctactgccccgcggtcaacatcgagc 278
| ||| | |||||||| |||||| |||||| ||||||| ||| | |||||| |||||
Sbjct: 246 gtatgaggtacttccacaagctcagcaacaggttctacaccccgaccgtcaacgtcgaga 305
Query: 279 gcctctggtcgatggtgcccaccgacaaggcggcggaggccggcggcgacaaggccccgc 338
| |||||||| |||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 306 ggctctggtccatggtgccgtccgacaaggccgcggaggccggcggcgacaaggcccccg 365
Query: 339 agatcgacgtcacgcagttcggctacttcaaggtgctcgggaagggggtgctgccgccaa 398
|||||||| |||||||||||||||||||||||||||| |||||| |||||||| |
Sbjct: 366 tcgtcgacgtctcgcagttcggctacttcaaggtgctcggcaaggggatgctgccggaga 425
Query: 399 agcccattgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggcag 458
||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |
Sbjct: 426 agcccatcgtcgtcaaggccaagctcatctccaagatcgccgagaagaagatcaaggccg 485
Query: 459 caggcggcgccgtcgtgctcaccgcctagg 488
| |||||||| ||||||||| ||||||||
Sbjct: 486 ccggcggcgctgtcgtgctcgtcgcctagg 515
>gb|CA022311.1|CA022311 HZ42M02r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ42M02
5-PRIME, mRNA sequence
Length = 597
Score = 464 bits (234), Expect = e-129
Identities = 396/450 (88%)
Strand = Plus / Plus
Query: 39 cggcggcggcgatgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccg 98
|||||||||||||||| || ||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 51 cggcggcggcgatgacgacccgcctcaagaagaaccgcaagaagcgcggccacgtctccg 110
Query: 99 ccgggcacggccgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtg 158
|||||||||| || | ||||||||| | ||||| || ||||| |||||||||||||| |
Sbjct: 111 ccgggcacgggcgtgtgggcaagcaccgcaagcatcccggaggccgcggtaacgccggag 170
Query: 159 gcatgcaccaccaccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttg 218
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||| || |
Sbjct: 171 gcatgcaccaccaccgcatcctcttcgacaagtaccatcccggctacttcggcaaagtcg 230
Query: 219 gcatgcgttacttccataagctccgcaacaagttctactgccccgcggtcaacatcgagc 278
| ||| | |||||||| |||||| |||||| ||||||| ||| | |||||| |||||
Sbjct: 231 gtatgaggtacttccacaagctcagcaacaggttctacaccccgaccgtcaacgtcgaga 290
Query: 279 gcctctggtcgatggtgcccaccgacaaggcggcggaggccggcggcgacaaggccccgc 338
| |||||||| |||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 291 ggctctggtccatggtgccgtccgacaaggccgcggaggccggcggcgacaaggcccccg 350
Query: 339 agatcgacgtcacgcagttcggctacttcaaggtgctcgggaagggggtgctgccgccaa 398
|||||||| |||||||||||||||||||||||||||| |||||| |||||||| |
Sbjct: 351 tcgtcgacgtctcgcagttcggctacttcaaggtgctcggcaaggggatgctgccggaga 410
Query: 399 agcccattgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggcag 458
||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |
Sbjct: 411 agcccatcgtcgtcaaggccaagctcatctccaagatcgccgagaagaagatcaaggccg 470
Query: 459 caggcggcgccgtcgtgctcaccgcctagg 488
| |||||||| ||||||||| ||||||||
Sbjct: 471 ccggcggcgctgtcgtgctcgtcgcctagg 500
>gb|CA023078.1|CA023078 HZ45C21r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ45C21
5-PRIME, mRNA sequence
Length = 549
Score = 464 bits (234), Expect = e-129
Identities = 396/450 (88%)
Strand = Plus / Plus
Query: 39 cggcggcggcgatgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccg 98
|||||||||||||||| || ||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 58 cggcggcggcgatgacgacccgcctcaagaagaaccgcaagaagcgcggccacgtctccg 117
Query: 99 ccgggcacggccgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtg 158
|||||||||| || | ||||||||| | ||||| || ||||| |||||||||||||| |
Sbjct: 118 ccgggcacgggcgtgtgggcaagcaccgcaagcatcccggaggccgcggtaacgccggag 177
Query: 159 gcatgcaccaccaccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttg 218
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||| || |
Sbjct: 178 gcatgcaccaccaccgcatcctcttcgacaagtaccatcccggctacttcggcaaagtcg 237
Query: 219 gcatgcgttacttccataagctccgcaacaagttctactgccccgcggtcaacatcgagc 278
| ||| | |||||||| |||||| |||||| ||||||| ||| | |||||| |||||
Sbjct: 238 gtatgaggtacttccacaagctcagcaacaggttctacaccccgaccgtcaacgtcgaga 297
Query: 279 gcctctggtcgatggtgcccaccgacaaggcggcggaggccggcggcgacaaggccccgc 338
| |||||||| |||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 298 ggctctggtccatggtgccgtccgacaaggccgcggaggccggcggcgacaaggcccccg 357
Query: 339 agatcgacgtcacgcagttcggctacttcaaggtgctcgggaagggggtgctgccgccaa 398
|||||||| |||||||||||||||||||||||||||| |||||| |||||||| |
Sbjct: 358 tcgtcgacgtctcgcagttcggctacttcaaggtgctcggcaaggggatgctgccggaga 417
Query: 399 agcccattgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggcag 458
||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |
Sbjct: 418 agcccatcgtcgtcaaggccaagctcatctccaagatcgccgagaagaagatcaaggccg 477
Query: 459 caggcggcgccgtcgtgctcaccgcctagg 488
| |||||||| ||||||||| ||||||||
Sbjct: 478 ccggcggcgctgtcgtgctcgtcgcctagg 507
>gb|CA024593.1|CA024593 HZ49M01r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ49M01
5-PRIME, mRNA sequence
Length = 563
Score = 464 bits (234), Expect = e-129
Identities = 396/450 (88%)
Strand = Plus / Plus
Query: 39 cggcggcggcgatgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccg 98
|||||||||||||||| || ||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 50 cggcggcggcgatgacgacccgcctcaagaagaaccgcaagaagcgcggccacgtctccg 109
Query: 99 ccgggcacggccgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtg 158
|||||||||| || | ||||||||| | ||||| || ||||| |||||||||||||| |
Sbjct: 110 ccgggcacgggcgtgtgggcaagcaccgcaagcatcccggaggccgcggtaacgccggag 169
Query: 159 gcatgcaccaccaccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttg 218
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||| || |
Sbjct: 170 gcatgcaccaccaccgcatcctcttcgacaagtaccatcccggctacttcggcaaagtcg 229
Query: 219 gcatgcgttacttccataagctccgcaacaagttctactgccccgcggtcaacatcgagc 278
| ||| | |||||||| |||||| |||||| ||||||| ||| | |||||| |||||
Sbjct: 230 gtatgaggtacttccacaagctcagcaacaggttctacaccccgaccgtcaacgtcgaga 289
Query: 279 gcctctggtcgatggtgcccaccgacaaggcggcggaggccggcggcgacaaggccccgc 338
| |||||||| |||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 290 ggctctggtccatggtgccgtccgacaaggccgcggaggccggcggcgacaaggcccccg 349
Query: 339 agatcgacgtcacgcagttcggctacttcaaggtgctcgggaagggggtgctgccgccaa 398
|||||||| |||||||||||||||||||||||||||| |||||| |||||||| |
Sbjct: 350 tcgtcgacgtctcgcagttcggctacttcaaggtgctcggcaaggggatgctgccggaga 409
Query: 399 agcccattgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggcag 458
||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |
Sbjct: 410 agcccatcgtcgtcaaggccaagctcatctccaagatcgccgagaagaagatcaaggccg 469
Query: 459 caggcggcgccgtcgtgctcaccgcctagg 488
| |||||||| ||||||||| ||||||||
Sbjct: 470 ccggcggcgctgtcgtgctcgtcgcctagg 499
>gb|CA029521.1|CA029521 HZ65H09r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ65H09
5-PRIME, mRNA sequence
Length = 605
Score = 464 bits (234), Expect = e-129
Identities = 396/450 (88%)
Strand = Plus / Plus
Query: 39 cggcggcggcgatgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccg 98
|||||||||||||||| || ||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 53 cggcggcggcgatgacgacccgcctcaagaagaaccgcaagaagcgcggccacgtctccg 112
Query: 99 ccgggcacggccgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtg 158
|||||||||| || | ||||||||| | ||||| || ||||| |||||||||||||| |
Sbjct: 113 ccgggcacgggcgtgtgggcaagcaccgcaagcatcccggaggccgcggtaacgccggag 172
Query: 159 gcatgcaccaccaccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttg 218
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||| || |
Sbjct: 173 gcatgcaccaccaccgcatcctcttcgacaagtaccatcccggctacttcggcaaagtcg 232
Query: 219 gcatgcgttacttccataagctccgcaacaagttctactgccccgcggtcaacatcgagc 278
| ||| | |||||||| |||||| |||||| ||||||| ||| | |||||| |||||
Sbjct: 233 gtatgaggtacttccacaagctcagcaacaggttctacaccccgaccgtcaacgtcgaga 292
Query: 279 gcctctggtcgatggtgcccaccgacaaggcggcggaggccggcggcgacaaggccccgc 338
| |||||||| |||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 293 ggctctggtccatggtgccgtccgacaaggccgcggaggccggcggcgacaaggcccccg 352
Query: 339 agatcgacgtcacgcagttcggctacttcaaggtgctcgggaagggggtgctgccgccaa 398
|||||||| |||||||||||||||||||||||||||| |||||| |||||||| |
Sbjct: 353 tcgtcgacgtctcgcagttcggctacttcaaggtgctcggcaaggggatgctgccggaga 412
Query: 399 agcccattgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggcag 458
||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |
Sbjct: 413 agcccatcgtcgtcaaggccaagctcatctccaagatcgccgagaagaagatcaaggccg 472
Query: 459 caggcggcgccgtcgtgctcaccgcctagg 488
| |||||||| ||||||||| ||||||||
Sbjct: 473 ccggcggcgctgtcgtgctcgtcgcctagg 502
>gb|CA030122.1|CA030122 HX06C11r HX Hordeum vulgare subsp. vulgare cDNA clone HX06C11
5-PRIME, mRNA sequence
Length = 616
Score = 464 bits (234), Expect = e-129
Identities = 396/450 (88%)
Strand = Plus / Plus
Query: 39 cggcggcggcgatgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccg 98
|||||||||||||||| || ||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 54 cggcggcggcgatgacgacccgcctcaagaagaaccgcaagaagcgcggccacgtctccg 113
Query: 99 ccgggcacggccgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtg 158
|||||||||| || | ||||||||| | ||||| || ||||| |||||||||||||| |
Sbjct: 114 ccgggcacgggcgtgtgggcaagcaccgcaagcatcccggaggccgcggtaacgccggag 173
Query: 159 gcatgcaccaccaccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttg 218
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||| || |
Sbjct: 174 gcatgcaccaccaccgcatcctcttcgacaagtaccatcccggctacttcggcaaagtcg 233
Query: 219 gcatgcgttacttccataagctccgcaacaagttctactgccccgcggtcaacatcgagc 278
| ||| | |||||||| |||||| |||||| ||||||| ||| | |||||| |||||
Sbjct: 234 gtatgaggtacttccacaagctcagcaacaggttctacaccccgaccgtcaacgtcgaga 293
Query: 279 gcctctggtcgatggtgcccaccgacaaggcggcggaggccggcggcgacaaggccccgc 338
| |||||||| |||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 294 ggctctggtccatggtgccgtccgacaaggccgcggaggccggcggcgacaaggcccccg 353
Query: 339 agatcgacgtcacgcagttcggctacttcaaggtgctcgggaagggggtgctgccgccaa 398
|||||||| |||||||||||||||||||||||||||| |||||| |||||||| |
Sbjct: 354 tcgtcgacgtctcgcagttcggctacttcaaggtgctcggcaaggggatgctgccggaga 413
Query: 399 agcccattgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggcag 458
||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |
Sbjct: 414 agcccatcgtcgtcaaggccaagctcatctccaagatcgccgagaagaagatcaaggccg 473
Query: 459 caggcggcgccgtcgtgctcaccgcctagg 488
| |||||||| ||||||||| ||||||||
Sbjct: 474 ccggcggcgctgtcgtgctcgtcgcctagg 503
>gb|CA031309.1|CA031309 HX09J10r HX Hordeum vulgare subsp. vulgare cDNA clone HX09J10
5-PRIME, mRNA sequence
Length = 670
Score = 464 bits (234), Expect = e-129
Identities = 396/450 (88%)
Strand = Plus / Plus
Query: 39 cggcggcggcgatgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccg 98
|||||||||||||||| || ||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 64 cggcggcggcgatgacgacccgcctcaagaagaaccgcaagaagcgcggccacgtctccg 123
Query: 99 ccgggcacggccgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtg 158
|||||||||| || | ||||||||| | ||||| || ||||| |||||||||||||| |
Sbjct: 124 ccgggcacgggcgtgtgggcaagcaccgcaagcatcccggaggccgcggtaacgccggag 183
Query: 159 gcatgcaccaccaccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttg 218
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||| || |
Sbjct: 184 gcatgcaccaccaccgcatcctcttcgacaagtaccatcccggctacttcggcaaagtcg 243
Query: 219 gcatgcgttacttccataagctccgcaacaagttctactgccccgcggtcaacatcgagc 278
| ||| | |||||||| |||||| |||||| ||||||| ||| | |||||| |||||
Sbjct: 244 gtatgaggtacttccacaagctcagcaacaggttctacaccccgaccgtcaacgtcgaga 303
Query: 279 gcctctggtcgatggtgcccaccgacaaggcggcggaggccggcggcgacaaggccccgc 338
| |||||||| |||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 304 ggctctggtccatggtgccgtccgacaaggccgcggaggccggcggcgacaaggcccccg 363
Query: 339 agatcgacgtcacgcagttcggctacttcaaggtgctcgggaagggggtgctgccgccaa 398
|||||||| |||||||||||||||||||||||||||| |||||| |||||||| |
Sbjct: 364 tcgtcgacgtctcgcagttcggctacttcaaggtgctcggcaaggggatgctgccggaga 423
Query: 399 agcccattgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggcag 458
||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |
Sbjct: 424 agcccatcgtcgtcaaggccaagctcatctccaagatcgccgagaagaagatcaaggccg 483
Query: 459 caggcggcgccgtcgtgctcaccgcctagg 488
| |||||||| ||||||||| ||||||||
Sbjct: 484 ccggcggcgctgtcgtgctcgtcgcctagg 513
>gb|CA032961.1|CA032961 HX14L09r HX Hordeum vulgare subsp. vulgare cDNA clone HX14L09
5-PRIME, mRNA sequence
Length = 644
Score = 464 bits (234), Expect = e-129
Identities = 396/450 (88%)
Strand = Plus / Plus
Query: 39 cggcggcggcgatgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccg 98
|||||||||||||||| || ||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 53 cggcggcggcgatgacgacccgcctcaagaagaaccgcaagaagcgcggccacgtctccg 112
Query: 99 ccgggcacggccgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtg 158
|||||||||| || | ||||||||| | ||||| || ||||| |||||||||||||| |
Sbjct: 113 ccgggcacgggcgtgtgggcaagcaccgcaagcatcccggaggccgcggtaacgccggag 172
Query: 159 gcatgcaccaccaccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttg 218
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||| || |
Sbjct: 173 gcatgcaccaccaccgcatcctcttcgacaagtaccatcccggctacttcggcaaagtcg 232
Query: 219 gcatgcgttacttccataagctccgcaacaagttctactgccccgcggtcaacatcgagc 278
| ||| | |||||||| |||||| |||||| ||||||| ||| | |||||| |||||
Sbjct: 233 gtatgaggtacttccacaagctcagcaacaggttctacaccccgaccgtcaacgtcgaga 292
Query: 279 gcctctggtcgatggtgcccaccgacaaggcggcggaggccggcggcgacaaggccccgc 338
| |||||||| |||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 293 ggctctggtccatggtgccgtccgacaaggccgcggaggccggcggcgacaaggcccccg 352
Query: 339 agatcgacgtcacgcagttcggctacttcaaggtgctcgggaagggggtgctgccgccaa 398
|||||||| |||||||||||||||||||||||||||| |||||| |||||||| |
Sbjct: 353 tcgtcgacgtctcgcagttcggctacttcaaggtgctcggcaaggggatgctgccggaga 412
Query: 399 agcccattgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggcag 458
||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |
Sbjct: 413 agcccatcgtcgtcaaggccaagctcatctccaagatcgccgagaagaagatcaaggccg 472
Query: 459 caggcggcgccgtcgtgctcaccgcctagg 488
| |||||||| ||||||||| ||||||||
Sbjct: 473 ccggcggcgctgtcgtgctcgtcgcctagg 502
>gb|CB881050.1|CB881050 HM08J23w HM Hordeum vulgare subsp. vulgare cDNA clone HM08J23
3-PRIME, mRNA sequence
Length = 634
Score = 464 bits (234), Expect = e-129
Identities = 396/450 (88%)
Strand = Plus / Minus
Query: 39 cggcggcggcgatgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccg 98
|||||||||||||||| || ||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 626 cggcggcggcgatgacgacccgcctcaagaagaaccgcaagaagcgcggccacgtctccg 567
Query: 99 ccgggcacggccgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtg 158
|||||||||| || | ||||||||| | ||||| || ||||| |||||||||||||| |
Sbjct: 566 ccgggcacgggcgtgtgggcaagcaccgcaagcatcccggaggccgcggtaacgccggag 507
Query: 159 gcatgcaccaccaccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttg 218
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||| || |
Sbjct: 506 gcatgcaccaccaccgcatcctcttcgacaagtaccatcccggctacttcggcaaagtcg 447
Query: 219 gcatgcgttacttccataagctccgcaacaagttctactgccccgcggtcaacatcgagc 278
| ||| | |||||||| |||||| |||||| ||||||| ||| | |||||| |||||
Sbjct: 446 gtatgaggtacttccacaagctcagcaacaggttctacaccccgaccgtcaacgtcgaga 387
Query: 279 gcctctggtcgatggtgcccaccgacaaggcggcggaggccggcggcgacaaggccccgc 338
| |||||||| |||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 386 ggctctggtccatggtgccgtccgacaaggccgcggaggccggcggcgacaaggcccccg 327
Query: 339 agatcgacgtcacgcagttcggctacttcaaggtgctcgggaagggggtgctgccgccaa 398
|||||||| |||||||||||||||||||||||||||| |||||| |||||||| |
Sbjct: 326 tcgtcgacgtctcgcagttcggctacttcaaggtgctcggcaaggggatgctgccggaga 267
Query: 399 agcccattgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggcag 458
||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |
Sbjct: 266 agcccatcgtcgtcaaggccaagctcatctccaagatcgccgagaagaagatcaaggccg 207
Query: 459 caggcggcgccgtcgtgctcaccgcctagg 488
| |||||||| ||||||||| ||||||||
Sbjct: 206 ccggcggcgctgtcgtgctcgtcgcctagg 177
>gb|CB881864.1|CB881864 HM11C02w HM Hordeum vulgare subsp. vulgare cDNA clone HM11C02
3-PRIME, mRNA sequence
Length = 638
Score = 464 bits (234), Expect = e-129
Identities = 396/450 (88%)
Strand = Plus / Minus
Query: 39 cggcggcggcgatgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccg 98
|||||||||||||||| || ||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 626 cggcggcggcgatgacgacccgcctcaagaagaaccgcaagaagcgcggccacgtctccg 567
Query: 99 ccgggcacggccgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtg 158
|||||||||| || | ||||||||| | ||||| || ||||| |||||||||||||| |
Sbjct: 566 ccgggcacgggcgtgtgggcaagcaccgcaagcatcccggaggccgcggtaacgccggag 507
Query: 159 gcatgcaccaccaccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttg 218
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||| || |
Sbjct: 506 gcatgcaccaccaccgcatcctcttcgacaagtaccatcccggctacttcggcaaagtcg 447
Query: 219 gcatgcgttacttccataagctccgcaacaagttctactgccccgcggtcaacatcgagc 278
| ||| | |||||||| |||||| |||||| ||||||| ||| | |||||| |||||
Sbjct: 446 gtatgaggtacttccacaagctcagcaacaggttctacaccccgaccgtcaacgtcgaga 387
Query: 279 gcctctggtcgatggtgcccaccgacaaggcggcggaggccggcggcgacaaggccccgc 338
| |||||||| |||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 386 ggctctggtccatggtgccgtccgacaaggccgcggaggccggcggcgacaaggcccccg 327
Query: 339 agatcgacgtcacgcagttcggctacttcaaggtgctcgggaagggggtgctgccgccaa 398
|||||||| |||||||||||||||||||||||||||| |||||| |||||||| |
Sbjct: 326 tcgtcgacgtctcgcagttcggctacttcaaggtgctcggcaaggggatgctgccggaga 267
Query: 399 agcccattgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggcag 458
||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |
Sbjct: 266 agcccatcgtcgtcaaggccaagctcatctccaagatcgccgagaagaagatcaaggccg 207
Query: 459 caggcggcgccgtcgtgctcaccgcctagg 488
| |||||||| ||||||||| ||||||||
Sbjct: 206 ccggcggcgctgtcgtgctcgtcgcctagg 177
>gb|CB883688.1|CB883688 HQ02P20w HQ Hordeum vulgare subsp. vulgare cDNA clone HQ02P20
3-PRIME, mRNA sequence
Length = 607
Score = 464 bits (234), Expect = e-129
Identities = 396/450 (88%)
Strand = Plus / Plus
Query: 39 cggcggcggcgatgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccg 98
|||||||||||||||| || ||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 67 cggcggcggcgatgacgacccgcctcaagaagaaccgcaagaagcgcggccacgtctccg 126
Query: 99 ccgggcacggccgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtg 158
|||||||||| || | ||||||||| | ||||| || ||||| |||||||||||||| |
Sbjct: 127 ccgggcacgggcgtgtgggcaagcaccgcaagcatcccggaggccgcggtaacgccggag 186
Query: 159 gcatgcaccaccaccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttg 218
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||| || |
Sbjct: 187 gcatgcaccaccaccgcatcctcttcgacaagtaccatcccggctacttcggcaaagtcg 246
Query: 219 gcatgcgttacttccataagctccgcaacaagttctactgccccgcggtcaacatcgagc 278
| ||| | |||||||| |||||| |||||| ||||||| ||| | |||||| |||||
Sbjct: 247 gtatgaggtacttccacaagctcagcaacaggttctacaccccgaccgtcaacgtcgaga 306
Query: 279 gcctctggtcgatggtgcccaccgacaaggcggcggaggccggcggcgacaaggccccgc 338
| |||||||| |||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 307 ggctctggtccatggtgccgtccgacaaggccgcggaggccggcggcgacaaggcccccg 366
Query: 339 agatcgacgtcacgcagttcggctacttcaaggtgctcgggaagggggtgctgccgccaa 398
|||||||| |||||||||||||||||||||||||||| |||||| |||||||| |
Sbjct: 367 tcgtcgacgtctcgcagttcggctacttcaaggtgctcggcaaggggatgctgccggaga 426
Query: 399 agcccattgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggcag 458
||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |
Sbjct: 427 agcccatcgtcgtcaaggccaagctcatctccaagatcgccgagaagaagatcaaggccg 486
Query: 459 caggcggcgccgtcgtgctcaccgcctagg 488
| |||||||| ||||||||| ||||||||
Sbjct: 487 ccggcggcgctgtcgtgctcgtcgcctagg 516
>gb|CV053918.1|CV053918 BNEL104f5 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL104f5 5' similar to putative
ribosomal protein L27a, mRNA sequence
Length = 634
Score = 464 bits (234), Expect = e-129
Identities = 396/450 (88%)
Strand = Plus / Plus
Query: 39 cggcggcggcgatgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccg 98
|||||||||||||||| || ||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 45 cggcggcggcgatgacgacccgcctcaagaagaaccgcaagaagcgcggccacgtctccg 104
Query: 99 ccgggcacggccgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtg 158
|||||||||| || | ||||||||| | ||||| || ||||| |||||||||||||| |
Sbjct: 105 ccgggcacgggcgtgtgggcaagcaccgcaagcatcccggaggccgcggtaacgccggag 164
Query: 159 gcatgcaccaccaccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttg 218
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||| || |
Sbjct: 165 gcatgcaccaccaccgcatcctcttcgacaagtaccatcccggctacttcggcaaagtcg 224
Query: 219 gcatgcgttacttccataagctccgcaacaagttctactgccccgcggtcaacatcgagc 278
| ||| | |||||||| |||||| |||||| ||||||| ||| | |||||| |||||
Sbjct: 225 gtatgaggtacttccacaagctcagcaacaggttctacaccccgaccgtcaacgtcgaga 284
Query: 279 gcctctggtcgatggtgcccaccgacaaggcggcggaggccggcggcgacaaggccccgc 338
| |||||||| |||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 285 ggctctggtccatggtgccgtccgacaaggccgcggaggccggcggcgacaaggcccccg 344
Query: 339 agatcgacgtcacgcagttcggctacttcaaggtgctcgggaagggggtgctgccgccaa 398
|||||||| |||||||||||||||||||||||||||| |||||| |||||||| |
Sbjct: 345 tcgtcgacgtctcgcagttcggctacttcaaggtgctcggcaaggggatgctgccggaga 404
Query: 399 agcccattgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggcag 458
||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |
Sbjct: 405 agcccatcgtcgtcaaggccaagctcatctccaagatcgccgagaagaagatcaaggccg 464
Query: 459 caggcggcgccgtcgtgctcaccgcctagg 488
| |||||||| ||||||||| ||||||||
Sbjct: 465 ccggcggcgctgtcgtgctcgtcgcctagg 494
>gb|BF629931.2|BF629931 HVSMEb0007F20f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0007F20f, mRNA sequence
Length = 503
Score = 460 bits (232), Expect = e-128
Identities = 388/440 (88%)
Strand = Plus / Plus
Query: 39 cggcggcggcgatgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccg 98
|||||||||||||||| || ||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 40 cggcggcggcgatgacgacccgcctcaagaagaaccgcaagaagcgcggccacgtctccg 99
Query: 99 ccgggcacggccgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtg 158
|||||||||| || | ||||||||| | ||||| || ||||| |||||||||||||| |
Sbjct: 100 ccgggcacgggcgtgtgggcaagcaccgcaagcatcccggaggccgcggtaacgccggag 159
Query: 159 gcatgcaccaccaccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttg 218
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||| || |
Sbjct: 160 gcatgcaccaccaccgcatcctcttcgacaagtaccatcccggctacttcggcaaagtcg 219
Query: 219 gcatgcgttacttccataagctccgcaacaagttctactgccccgcggtcaacatcgagc 278
| ||| | |||||||| |||||| |||||| ||||||| ||| | |||||| |||||
Sbjct: 220 gtatgaggtacttccacaagctcagcaacaggttctacaccccgaccgtcaacgtcgaga 279
Query: 279 gcctctggtcgatggtgcccaccgacaaggcggcggaggccggcggcgacaaggccccgc 338
| |||||||| |||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 280 ggctctggtccatggtgccgtccgacaaggccgcggaggccggcggcgacaaggcccccg 339
Query: 339 agatcgacgtcacgcagttcggctacttcaaggtgctcgggaagggggtgctgccgccaa 398
|||||||| |||||||||||||||||||||||||||| |||||| |||||||| |
Sbjct: 340 tcgtcgacgtctcgcagttcggctacttcaaggtgctcggcaaggggatgctgccggaga 399
Query: 399 agcccattgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggcag 458
||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |
Sbjct: 400 agcccatcgtcgtcaaggccaagctcatctccaagatcgccgagaagaagatcaaggccg 459
Query: 459 caggcggcgccgtcgtgctc 478
| |||||||| |||||||||
Sbjct: 460 ccggcggcgctgtcgtgctc 479
>gb|AV921646.1|AV921646 AV921646 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags12c24 3', mRNA sequence
Length = 585
Score = 460 bits (232), Expect = e-128
Identities = 394/448 (87%)
Strand = Plus / Minus
Query: 41 gcggcggcgatgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccgcc 100
|||||||||||||| || ||| ||||||||||||||||||||||||||||||| ||||||
Sbjct: 580 gcggcggcgatgacgacccgcctcaagaagaaccgcaagaagcgcggccacgtctccgcc 521
Query: 101 gggcacggccgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtggc 160
|||||||| || | ||||||||| | ||||| || ||||| |||||||||||||| |||
Sbjct: 520 gggcacgggcgtgtgggcaagcaccgcaagcatcccggaggccgcggtaacgccggaggc 461
Query: 161 atgcaccaccaccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttggc 220
|||||||||||||| ||||||||||||||||||||||| |||||||||||||| || ||
Sbjct: 460 atgcaccaccaccgcatcctcttcgacaagtaccatcccggctacttcggcaaagtcggt 401
Query: 221 atgcgttacttccataagctccgcaacaagttctactgccccgcggtcaacatcgagcgc 280
||| | |||||||| |||||| |||||| ||||||| ||| | |||||| ||||| |
Sbjct: 400 atgaggtacttccacaagctcagcaacaggttctacaccccgaccgtcaacgtcgagagg 341
Query: 281 ctctggtcgatggtgcccaccgacaaggcggcggaggccggcggcgacaaggccccgcag 340
|||||||| |||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 340 ctctggtccatggtgccgtccgacaaggccgcggaggccggcggcgacaaggcccccgtc 281
Query: 341 atcgacgtcacgcagttcggctacttcaaggtgctcgggaagggggtgctgccgccaaag 400
|||||||| |||||||||||||||||||||||||||| |||||| |||||||| |||
Sbjct: 280 gtcgacgtctcgcagttcggctacttcaaggtgctcggcaaggggatgctgccggagaag 221
Query: 401 cccattgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggcagca 460
||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| ||
Sbjct: 220 cccatcgtcgtcaaggccaagctcatctccaagatcgccgagaagaagatcaaggccgcc 161
Query: 461 ggcggcgccgtcgtgctcaccgcctagg 488
|||||||| ||||||||| ||||||||
Sbjct: 160 ggcggcgctgtcgtgctcgtcgcctagg 133
>gb|BM369641.2|BM369641 EBem07_SQ004_D07_R embryo, 28 DPA, no treatment, cv Optic, EBem07
Hordeum vulgare subsp. vulgare cDNA clone
EBem07_SQ004_D07 5', mRNA sequence
Length = 501
Score = 460 bits (232), Expect = e-128
Identities = 388/440 (88%)
Strand = Plus / Plus
Query: 39 cggcggcggcgatgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccg 98
|||||||||||||||| || ||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 35 cggcggcggcgatgacgacccgcctcaagaagaaccgcaagaagcgcggccacgtctccg 94
Query: 99 ccgggcacggccgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtg 158
|||||||||| || | ||||||||| | ||||| || ||||| |||||||||||||| |
Sbjct: 95 ccgggcacgggcgtgtgggcaagcaccgcaagcatcccggaggccgcggtaacgccggag 154
Query: 159 gcatgcaccaccaccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttg 218
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||| || |
Sbjct: 155 gcatgcaccaccaccgcatcctcttcgacaagtaccatcccggctacttcggcaaagtcg 214
Query: 219 gcatgcgttacttccataagctccgcaacaagttctactgccccgcggtcaacatcgagc 278
| ||| | |||||||| |||||| |||||| ||||||| ||| | |||||| |||||
Sbjct: 215 gtatgaggtacttccacaagctcagcaacaggttctacaccccgaccgtcaacgtcgaga 274
Query: 279 gcctctggtcgatggtgcccaccgacaaggcggcggaggccggcggcgacaaggccccgc 338
| |||||||| |||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 275 ggctctggtccatggtgccgtccgacaaggccgcggaggccggcggcgacaaggcccccg 334
Query: 339 agatcgacgtcacgcagttcggctacttcaaggtgctcgggaagggggtgctgccgccaa 398
|||||||| |||||||||||||||||||||||||||| |||||| |||||||| |
Sbjct: 335 tcgtcgacgtctcgcagttcggctacttcaaggtgctcggcaaggggatgctgccggaga 394
Query: 399 agcccattgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggcag 458
||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |
Sbjct: 395 agcccatcgtcgtcaaggccaagctcatctccaagatcgccgagaagaagatcaaggccg 454
Query: 459 caggcggcgccgtcgtgctc 478
| |||||||| |||||||||
Sbjct: 455 ccggcggcgctgtcgtgctc 474
>gb|BM099462.2|BM099462 EBes01_SQ003_F04_R embryo sac, 4-6 DPA, no treatment, cv Optic,
EBes01 Hordeum vulgare subsp. vulgare cDNA clone
EBes01_SQ003_F04 5', mRNA sequence
Length = 615
Score = 460 bits (232), Expect = e-128
Identities = 388/440 (88%)
Strand = Plus / Plus
Query: 39 cggcggcggcgatgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccg 98
|||||||||||||||| || ||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 48 cggcggcggcgatgacgacccgcctcaagaagaaccgcaagaagcgcggccacgtctccg 107
Query: 99 ccgggcacggccgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtg 158
|||||||||| || | ||||||||| | ||||| || ||||| |||||||||||||| |
Sbjct: 108 ccgggcacgggcgtgtgggcaagcaccgcaagcatcccggaggccgcggtaacgccggag 167
Query: 159 gcatgcaccaccaccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttg 218
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||| || |
Sbjct: 168 gcatgcaccaccaccgcatcctcttcgacaagtaccatcccggctacttcggcaaagtcg 227
Query: 219 gcatgcgttacttccataagctccgcaacaagttctactgccccgcggtcaacatcgagc 278
| ||| | |||||||| |||||| |||||| ||||||| ||| | |||||| |||||
Sbjct: 228 gtatgaggtacttccacaagctcagcaacaggttctacaccccgaccgtcaacgtcgaga 287
Query: 279 gcctctggtcgatggtgcccaccgacaaggcggcggaggccggcggcgacaaggccccgc 338
| |||||||| |||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 288 ggctctggtccatggtgccgtccgacaaggccgcggaggccggcggcgacaaggcccccg 347
Query: 339 agatcgacgtcacgcagttcggctacttcaaggtgctcgggaagggggtgctgccgccaa 398
|||||||| |||||||||||||||||||||||||||| |||||| |||||||| |
Sbjct: 348 tcgtcgacgtctcgcagttcggctacttcaaggtgctcggcaaggggatgctgccggaga 407
Query: 399 agcccattgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggcag 458
||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |
Sbjct: 408 agcccatcgtcgtcaaggccaagctcatctccaagatcgccgagaagaagatcaaggccg 467
Query: 459 caggcggcgccgtcgtgctc 478
| |||||||| |||||||||
Sbjct: 468 ccggcggcgctgtcgtgctc 487
>gb|BU981394.1|BU981394 HA23H21r HA Hordeum vulgare subsp. vulgare cDNA clone HA23H21
5-PRIME, mRNA sequence
Length = 496
Score = 460 bits (232), Expect = e-128
Identities = 388/440 (88%)
Strand = Plus / Plus
Query: 39 cggcggcggcgatgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccg 98
|||||||||||||||| || ||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 54 cggcggcggcgatgacgacccgcctcaagaagaaccgcaagaagcgcggccacgtctccg 113
Query: 99 ccgggcacggccgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtg 158
|||||||||| || | ||||||||| | ||||| || ||||| |||||||||||||| |
Sbjct: 114 ccgggcacgggcgtgtgggcaagcaccgcaagcatcccggaggccgcggtaacgccggag 173
Query: 159 gcatgcaccaccaccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttg 218
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||| || |
Sbjct: 174 gcatgcaccaccaccgcatcctcttcgacaagtaccatcccggctacttcggcaaagtcg 233
Query: 219 gcatgcgttacttccataagctccgcaacaagttctactgccccgcggtcaacatcgagc 278
| ||| | |||||||| |||||| |||||| ||||||| ||| | |||||| |||||
Sbjct: 234 gtatgaggtacttccacaagctcagcaacaggttctacaccccgaccgtcaacgtcgaga 293
Query: 279 gcctctggtcgatggtgcccaccgacaaggcggcggaggccggcggcgacaaggccccgc 338
| |||||||| |||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 294 ggctctggtccatggtgccgtccgacaaggccgcggaggccggcggcgacaaggcccccg 353
Query: 339 agatcgacgtcacgcagttcggctacttcaaggtgctcgggaagggggtgctgccgccaa 398
|||||||| |||||||||||||||||||||||||||| |||||| |||||||| |
Sbjct: 354 tcgtcgacgtctcgcagttcggctacttcaaggtgctcggcaaggggatgctgccggaga 413
Query: 399 agcccattgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggcag 458
||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |
Sbjct: 414 agcccatcgtcgtcaaggccaagctcatctccaagatcgccgagaagaagatcaaggccg 473
Query: 459 caggcggcgccgtcgtgctc 478
| |||||||| |||||||||
Sbjct: 474 ccggcggcgctgtcgtgctc 493
>gb|BU995711.1|BU995711 HM11C02r HM Hordeum vulgare subsp. vulgare cDNA clone HM11C02
5-PRIME, mRNA sequence
Length = 500
Score = 460 bits (232), Expect = e-128
Identities = 388/440 (88%)
Strand = Plus / Plus
Query: 39 cggcggcggcgatgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccg 98
|||||||||||||||| || ||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 59 cggcggcggcgatgacgacccgcctcaagaagaaccgcaagaagcgcggccacgtctccg 118
Query: 99 ccgggcacggccgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtg 158
|||||||||| || | ||||||||| | ||||| || ||||| |||||||||||||| |
Sbjct: 119 ccgggcacgggcgtgtgggcaagcaccgcaagcatcccggaggccgcggtaacgccggag 178
Query: 159 gcatgcaccaccaccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttg 218
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||| || |
Sbjct: 179 gcatgcaccaccaccgcatcctcttcgacaagtaccatcccggctacttcggcaaagtcg 238
Query: 219 gcatgcgttacttccataagctccgcaacaagttctactgccccgcggtcaacatcgagc 278
| ||| | |||||||| |||||| |||||| ||||||| ||| | |||||| |||||
Sbjct: 239 gtatgaggtacttccacaagctcagcaacaggttctacaccccgaccgtcaacgtcgaga 298
Query: 279 gcctctggtcgatggtgcccaccgacaaggcggcggaggccggcggcgacaaggccccgc 338
| |||||||| |||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 299 ggctctggtccatggtgccgtccgacaaggccgcggaggccggcggcgacaaggcccccg 358
Query: 339 agatcgacgtcacgcagttcggctacttcaaggtgctcgggaagggggtgctgccgccaa 398
|||||||| |||||||||||||||||||||||||||| |||||| |||||||| |
Sbjct: 359 tcgtcgacgtctcgcagttcggctacttcaaggtgctcggcaaggggatgctgccggaga 418
Query: 399 agcccattgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggcag 458
||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |
Sbjct: 419 agcccatcgtcgtcaaggccaagctcatctccaagatcgccgagaagaagatcaaggccg 478
Query: 459 caggcggcgccgtcgtgctc 478
| |||||||| |||||||||
Sbjct: 479 ccggcggcgctgtcgtgctc 498
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 151,524
Number of Sequences: 312970
Number of extensions: 151524
Number of successful extensions: 46944
Number of sequences better than 0.5: 172
Number of HSP's better than 0.5 without gapping: 171
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 46509
Number of HSP's gapped (non-prelim): 284
length of query: 699
length of database: 175,134,539
effective HSP length: 19
effective length of query: 680
effective length of database: 169,188,109
effective search space: 115047914120
effective search space used: 115047914120
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)