BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2448385.2.9
(708 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AV913433.1|AV913433 AV913433 K. Sato unpublished cDNA li... 583 e-165
gb|AV913612.1|AV913612 AV913612 K. Sato unpublished cDNA li... 583 e-165
gb|BM374231.2|BM374231 EBpi03_SQ003_A15_R pistil, 4 DPA, no... 583 e-165
gb|BQ766896.1|BQ766896 EBro08_SQ007_M11_R root, 3 week, dro... 583 e-165
gb|BU988118.1|BU988118 HF16L12r HF Hordeum vulgare subsp. v... 583 e-165
gb|BU996059.1|BU996059 HM12E22r HM Hordeum vulgare subsp. v... 583 e-165
gb|CB878523.1|CB878523 HP08N17T HP Hordeum vulgare subsp. v... 583 e-165
gb|CV057432.1|CV057432 BNEL27g4 Barley EST endosperm librar... 583 e-165
gb|CV058183.1|CV058183 BNEL35c11 Barley EST endosperm libra... 583 e-165
gb|CV058553.1|CV058553 BNEL39c2 Barley EST endosperm librar... 583 e-165
gb|CV060112.1|CV060112 BNEL54e8 Barley EST endosperm librar... 583 e-165
gb|CV060512.1|CV060512 BNEL59a1 Barley EST endosperm librar... 583 e-165
gb|CV060741.1|CV060741 BNEL60f2 Barley EST endosperm librar... 583 e-165
gb|BF623129.3|BF623129 HVSMEa0014J20f Hordeum vulgare seedl... 575 e-163
gb|BM374939.1|BM374939 EBma05_SQ003_L05_R maternal, 12 DPA,... 575 e-163
gb|AV917410.1|AV917410 AV917410 K. Sato unpublished cDNA li... 575 e-163
gb|AV922589.1|AV922589 AV922589 K. Sato unpublished cDNA li... 575 e-163
gb|AV925376.1|AV925376 AV925376 K. Sato unpublished cDNA li... 575 e-163
gb|AV931726.1|AV931726 AV931726 K. Sato unpublished cDNA li... 575 e-163
gb|BJ471556.1|BJ471556 BJ471556 K. Sato unpublished cDNA li... 575 e-163
gb|BJ474154.1|BJ474154 BJ474154 K. Sato unpublished cDNA li... 575 e-163
gb|BM377511.2|BM377511 EBem04_SQ003_F17_R embryo, 12 DPA, n... 575 e-163
gb|BM374024.2|BM374024 EBma03_SQ003_G16_R maternal, 8 DPA, ... 575 e-163
gb|BM372709.2|BM372709 EBpi05_SQ003_L12_R pistil, 8 DPA, no... 575 e-163
gb|BQ763503.1|BQ763503 EBro02_SQ008_G18_R root, 3 week, hyd... 575 e-163
gb|CV054259.1|CV054259 BNEL108e4 Barley EST endosperm libra... 575 e-163
gb|CV056755.1|CV056755 BNEL20c2 Barley EST endosperm librar... 575 e-163
gb|CV059230.1|CV059230 BNEL45h1 Barley EST endosperm librar... 575 e-163
gb|CV061169.1|CV061169 BNEL65g1 Barley EST endosperm librar... 575 e-163
gb|CV062841.1|CV062841 BNEL83f5 Barley EST endosperm librar... 575 e-163
gb|CV064203.1|CV064203 BNEL99c12 Barley EST endosperm libra... 575 e-163
gb|BU981588.1|BU981588 HA24B01r HA Hordeum vulgare subsp. v... 571 e-161
gb|BM375816.2|BM375816 EBem06_SQ004_H24_R embryo, 21 DPA, n... 569 e-161
gb|BM368947.2|BM368947 EBem07_SQ002_B19_R embryo, 28 DPA, n... 569 e-161
gb|CV057843.1|CV057843 BNEL31d9 Barley EST endosperm librar... 569 e-161
gb|BM096567.2|BM096567 EBma05_SQ001_L23_R maternal, 12 DPA,... 567 e-160
gb|BF629950.2|BF629950 HVSMEb0007H03f Hordeum vulgare seedl... 561 e-158
gb|BQ762368.1|BQ762368 EBro01_SQ005_J17_R root, 3 week, hyd... 561 e-158
gb|CV060606.1|CV060606 BNEL5A9 Barley EST endosperm library... 561 e-158
gb|AV916081.1|AV916081 AV916081 K. Sato unpublished cDNA li... 557 e-157
gb|AJ460735.1|AJ460735 AJ460735 S00002 Hordeum vulgare subs... 557 e-157
gb|BQ761848.1|BQ761848 EBpi01_SQ005_F06_R pistil, 1 DPA, no... 555 e-157
gb|BI959645.1|BI959645 HVSMEn0020J03f Hordeum vulgare rachi... 553 e-156
gb|AL508127.1|AL508127 AL508127 Hordeum vulgare Barke devel... 551 e-155
gb|BQ460148.1|BQ460148 HA07B12r HA Hordeum vulgare subsp. v... 551 e-155
gb|BQ464412.1|BQ464412 HF02D08r HF Hordeum vulgare subsp. v... 551 e-155
gb|BQ469009.1|BQ469009 HM03B14r HM Hordeum vulgare subsp. v... 551 e-155
gb|BU976563.1|BU976563 HA03O16r HA Hordeum vulgare subsp. v... 551 e-155
gb|BU978209.1|BU978209 HA12M04r HA Hordeum vulgare subsp. v... 551 e-155
gb|BU978517.1|BU978517 HA13H11r HA Hordeum vulgare subsp. v... 551 e-155
gb|BU981723.1|BU981723 HA24H04r HA Hordeum vulgare subsp. v... 551 e-155
gb|BU983461.1|BU983461 HA29N06r HA Hordeum vulgare subsp. v... 551 e-155
gb|BU995425.1|BU995425 HM10D13r HM Hordeum vulgare subsp. v... 551 e-155
gb|CA003048.1|CA003048 HS09E03r HS Hordeum vulgare subsp. v... 551 e-155
gb|CA007420.1|CA007420 HU07O14r HU Hordeum vulgare subsp. v... 551 e-155
gb|CA018337.1|CA018337 HV08F10r HV Hordeum vulgare subsp. v... 551 e-155
gb|CA023327.1|CA023327 HZ45O06r HZ Hordeum vulgare subsp. v... 551 e-155
gb|CA025213.1|CA025213 HZ51I11r HZ Hordeum vulgare subsp. v... 551 e-155
gb|CA030777.1|CA030777 HX08B16r HX Hordeum vulgare subsp. v... 551 e-155
gb|CA031768.1|CA031768 HX11B08r HX Hordeum vulgare subsp. v... 551 e-155
gb|BG299706.2|BG299706 HVSMEa0021H17f Hordeum vulgare seedl... 547 e-154
gb|BU990300.1|BU990300 HF24K01r HF Hordeum vulgare subsp. v... 547 e-154
gb|AL507586.1|AL507586 AL507586 Hordeum vulgare Barke devel... 545 e-154
gb|CK124459.1|CK124459 BES1824109d13 BES1824 Hordeum vulgar... 545 e-154
gb|CK125767.1|CK125767 BES1824110l22 BES1824 Hordeum vulgar... 543 e-153
gb|BQ469579.1|BQ469579 HZ01D15r HZ Hordeum vulgare subsp. v... 541 e-152
gb|BU978729.1|BU978729 HA14B19r HA Hordeum vulgare subsp. v... 541 e-152
gb|BM375809.2|BM375809 EBem06_SQ004_H16_R embryo, 21 DPA, n... 539 e-152
gb|AV918916.1|AV918916 AV918916 K. Sato unpublished cDNA li... 535 e-151
gb|AL508128.1|AL508128 AL508128 Hordeum vulgare Barke devel... 533 e-150
gb|BM098433.2|BM098433 EBem08_SQ003_A18_R embryo, 40 DPA, n... 533 e-150
gb|AL506872.1|AL506872 AL506872 Hordeum vulgare Barke devel... 531 e-149
gb|BG416159.2|BG416159 HVSMEk0009P23f Hordeum vulgare testa... 531 e-149
gb|BQ463401.1|BQ463401 HI05C07r HI Hordeum vulgare subsp. v... 531 e-149
gb|BM374955.1|BM374955 EBma05_SQ003_M13_R maternal, 12 DPA,... 529 e-149
gb|AV921202.1|AV921202 AV921202 K. Sato unpublished cDNA li... 529 e-149
gb|CA027077.1|CA027077 HZ57N05r HZ Hordeum vulgare subsp. v... 527 e-148
gb|BE231321.2|BE231321 HVSMEg0019O15f Hordeum vulgare pre-a... 525 e-148
gb|BQ468806.1|BQ468806 HM02G10r HM Hordeum vulgare subsp. v... 521 e-147
gb|AL508630.1|AL508630 AL508630 Hordeum vulgare Barke devel... 519 e-146
gb|AL510532.1|AL510532 AL510532 Hordeum vulgare Barke devel... 519 e-146
gb|AL507368.1|AL507368 AL507368 Hordeum vulgare Barke devel... 515 e-145
gb|BF264839.2|BF264839 HV_CEa0010I10f Hordeum vulgare seedl... 515 e-145
gb|BQ464396.1|BQ464396 HF02C14r HF Hordeum vulgare subsp. v... 511 e-144
gb|BQ465604.1|BQ465604 HU04C09r HU Hordeum vulgare subsp. v... 509 e-143
gb|BG418386.2|BG418386 HVSMEk0022I12f Hordeum vulgare testa... 504 e-141
gb|CB879324.1|CB879324 HP11M01T HP Hordeum vulgare subsp. v... 504 e-141
gb|BQ462478.1|BQ462478 HI01A02T HI Hordeum vulgare subsp. v... 498 e-139
gb|BM441159.2|BM441159 EBed02_SQ002_J14_R endosperm, 8 DPA,... 498 e-139
gb|BQ466059.1|BQ466059 HT01H10T HT Hordeum vulgare subsp. v... 496 e-139
gb|BI776242.2|BI776242 EBem04_SQ001_C08_R embryo, 12 DPA, n... 490 e-137
gb|BM376875.2|BM376875 EBem05_SQ003_H16_R embryo, 14 DPA, n... 482 e-135
gb|BM100344.2|BM100344 EBma01_SQ001_O18_R maternal, 4 DPA, ... 478 e-133
gb|BE060271.3|BE060271 HVSMEg0011M17f Hordeum vulgare pre-a... 474 e-132
gb|CB876372.1|CB876372 HX11B08w HX Hordeum vulgare subsp. v... 474 e-132
gb|BM375397.2|BM375397 EBem06_SQ003_D16_R embryo, 21 DPA, n... 472 e-132
gb|BQ767742.1|BQ767742 EBro08_SQ009_P18_R root, 3 week, dro... 472 e-132
gb|BU979363.1|BU979363 HA15O20r HA Hordeum vulgare subsp. v... 472 e-132
gb|BG299707.2|BG299707 HVSMEa0021H19f Hordeum vulgare seedl... 470 e-131
gb|AV913434.1|AV913434 AV913434 K. Sato unpublished cDNA li... 470 e-131
gb|BQ761610.1|BQ761610 EBem10_SQ001_D11_R embryo, 2 Day ger... 464 e-129
gb|AJ460732.1|AJ460732 AJ460732 S00002 Hordeum vulgare subs... 462 e-129
gb|BQ469907.1|BQ469907 HX01D10T HX Hordeum vulgare subsp. v... 456 e-127
gb|BU970622.1|BU970622 HB15D03r BC Hordeum vulgare subsp. v... 456 e-127
gb|BU971146.1|BU971146 HB16L23r BC Hordeum vulgare subsp. v... 456 e-127
gb|BU973149.1|BU973149 HB23O16r BC Hordeum vulgare subsp. v... 456 e-127
gb|BF621498.1|BF621498 HVSMEa0011D06f Hordeum vulgare seedl... 454 e-126
gb|BI777504.2|BI777504 EBro04_SQ001_G21_R root, 3 week, sal... 454 e-126
gb|BU980603.1|BU980603 HA21C07r HA Hordeum vulgare subsp. v... 452 e-126
gb|CA016567.1|CA016567 HV08F10u HV Hordeum vulgare subsp. v... 452 e-126
gb|BQ663051.1|BQ663051 HT01H10w HT Hordeum vulgare subsp. v... 448 e-124
gb|BQ753466.1|BQ753466 EBan01_SQ004_F15_R anther, yellow st... 448 e-124
gb|BF631575.2|BF631575 HVSMEb0016H13f Hordeum vulgare seedl... 446 e-124
gb|BU985453.1|BU985453 HF07F16r HF Hordeum vulgare subsp. v... 446 e-124
gb|BQ660109.1|BQ660109 HI01A02w HI Hordeum vulgare subsp. v... 440 e-122
gb|AJ460733.1|AJ460733 AJ460733 S00002 Hordeum vulgare subs... 436 e-121
gb|BQ657129.1|BQ657129 HA09J06u HA Hordeum vulgare subsp. v... 436 e-121
gb|AV918352.1|AV918352 AV918352 K. Sato unpublished cDNA li... 434 e-120
gb|BU977665.1|BU977665 HA11N07r HA Hordeum vulgare subsp. v... 424 e-117
gb|CA027364.1|CA027364 HZ58K23r HZ Hordeum vulgare subsp. v... 422 e-117
gb|BU973740.1|BU973740 HB25N08r BC Hordeum vulgare subsp. v... 420 e-116
gb|BU976564.1|BU976564 HA03O16u HA Hordeum vulgare subsp. v... 420 e-116
gb|CA003040.1|CA003040 HS09D04r HS Hordeum vulgare subsp. v... 420 e-116
gb|BF261635.3|BF261635 HV_CEa0001M21f Hordeum vulgare seedl... 418 e-115
gb|BM373157.2|BM373157 EBma04_SQ003_F06_R maternal, 10 DPA,... 416 e-115
gb|AV917097.1|AV917097 AV917097 K. Sato unpublished cDNA li... 410 e-113
gb|BG343444.2|BG343444 HVSMEg0005M13f Hordeum vulgare pre-a... 404 e-111
gb|BF256476.3|BF256476 HVSMEf0010B09f Hordeum vulgare seedl... 396 e-109
gb|BE602640.3|BE602640 HVSMEh0100M15f Hordeum vulgare 5-45 ... 396 e-109
gb|AV916831.1|AV916831 AV916831 K. Sato unpublished cDNA li... 396 e-109
gb|AV922128.1|AV922128 AV922128 K. Sato unpublished cDNA li... 396 e-109
gb|BQ463381.1|BQ463381 HI05A23r HI Hordeum vulgare subsp. v... 396 e-109
gb|BQ754343.1|BQ754343 EBca01_SQ003_K09_R carpel, pre-anthe... 396 e-109
gb|CV054591.1|CV054591 BNEL111b4 Barley EST endosperm libra... 396 e-109
gb|CV055080.1|CV055080 BNEL116f1 Barley EST endosperm libra... 396 e-109
gb|CV057674.1|CV057674 BNEL2E12 Barley EST endosperm librar... 396 e-109
gb|CV057982.1|CV057982 BNEL33a7 Barley EST endosperm librar... 396 e-109
gb|AJ460734.1|AJ460734 AJ460734 S00002 Hordeum vulgare subs... 392 e-108
gb|AL511374.1|AL511374 AL511374 Hordeum vulgare Barke devel... 383 e-105
gb|BQ468656.1|BQ468656 HM01O09T HM Hordeum vulgare subsp. v... 383 e-105
gb|BQ657765.1|BQ657765 HA07B12u HA Hordeum vulgare subsp. v... 383 e-105
gb|BQ661344.1|BQ661344 HM03B14u HM Hordeum vulgare subsp. v... 383 e-105
gb|BU978210.1|BU978210 HA12M04u HA Hordeum vulgare subsp. v... 383 e-105
gb|BU983114.1|BU983114 HA28J15r HA Hordeum vulgare subsp. v... 383 e-105
gb|CA000266.1|CA000266 HS09D04u HS Hordeum vulgare subsp. v... 383 e-105
gb|CA000280.1|CA000280 HS09E03u HS Hordeum vulgare subsp. v... 383 e-105
gb|BQ665818.1|BQ665818 HZ01D15u HZ Hordeum vulgare subsp. v... 381 e-104
gb|AL507402.1|AL507402 AL507402 Hordeum vulgare Barke devel... 375 e-102
gb|BQ459481.1|BQ459481 HA08P24r HA Hordeum vulgare subsp. v... 375 e-102
gb|BI778561.2|BI778561 EBro07_SQ003_K12_R root, 3 week, red... 375 e-102
gb|BU997837.1|BU997837 HI09C18r HI Hordeum vulgare subsp. v... 375 e-102
gb|CA002759.1|CA002759 HS08H03r HS Hordeum vulgare subsp. v... 375 e-102
gb|CA032184.1|CA032184 HX12E11r HX Hordeum vulgare subsp. v... 375 e-102
gb|CB859058.1|CB859058 HI09C18w HI Hordeum vulgare subsp. v... 375 e-102
gb|BQ662775.1|BQ662775 HS04C02u HS Hordeum vulgare subsp. v... 373 e-102
gb|BU983414.1|BU983414 HA29K13r HA Hordeum vulgare subsp. v... 361 2e-098
gb|BU996374.1|BU996374 HM13G13r HM Hordeum vulgare subsp. v... 357 3e-097
gb|BQ463151.1|BQ463151 HI04D10r HI Hordeum vulgare subsp. v... 355 1e-096
gb|BQ756855.1|BQ756855 EBem09_SQ003_P10_R embryo, 1 Day ger... 353 5e-096
gb|AL508701.1|AL508701 AL508701 Hordeum vulgare Barke devel... 351 2e-095
gb|BI959005.1|BI959005 HVSMEn0017K18f Hordeum vulgare rachi... 351 2e-095
gb|AV918734.1|AV918734 AV918734 K. Sato unpublished cDNA li... 347 3e-094
gb|BM098463.2|BM098463 EBem08_SQ003_C03_R embryo, 40 DPA, n... 343 5e-093
gb|BJ463473.1|BJ463473 BJ463473 K. Sato unpublished cDNA li... 341 2e-092
gb|AV918733.1|AV918733 AV918733 K. Sato unpublished cDNA li... 339 7e-092
gb|CB881553.1|CB881553 HM10C14w HM Hordeum vulgare subsp. v... 339 7e-092
gb|BQ464473.1|BQ464473 HF02G04r HF Hordeum vulgare subsp. v... 337 3e-091
gb|AL510873.1|AL510873 AL510873 Hordeum vulgare Barke devel... 329 7e-089
gb|CB875372.1|CB875372 HX08B16w HX Hordeum vulgare subsp. v... 323 4e-087
gb|BM098720.2|BM098720 EBem08_SQ003_O04_R embryo, 40 DPA, n... 317 3e-085
gb|CA028332.1|CA028332 HZ61K16r HZ Hordeum vulgare subsp. v... 311 2e-083
gb|BM097673.2|BM097673 EBem04_SQ002_G02_R embryo, 12 DPA, n... 305 1e-081
gb|BM369518.2|BM369518 EBem07_SQ003_N05_R embryo, 28 DPA, n... 305 1e-081
gb|BQ660708.1|BQ660708 HI05A23u HI Hordeum vulgare subsp. v... 297 3e-079
gb|BU977666.1|BU977666 HA11N07u HA Hordeum vulgare subsp. v... 297 3e-079
gb|BU982421.1|BU982421 HA26I02r HA Hordeum vulgare subsp. v... 297 3e-079
gb|CA000328.1|CA000328 HS08N18u HS Hordeum vulgare subsp. v... 295 1e-078
gb|CA002904.1|CA002904 HS08N18r HS Hordeum vulgare subsp. v... 295 1e-078
gb|AJ434089.1|AJ434089 AJ434089 S00002 Hordeum vulgare subs... 289 6e-077
gb|BM368527.2|BM368527 EBem08_SQ002_K05_R embryo, 40 DPA, n... 283 4e-075
gb|AL510607.1|AL510607 AL510607 Hordeum vulgare Barke devel... 281 2e-074
gb|BU986198.1|BU986198 HF09P13r HF Hordeum vulgare subsp. v... 281 2e-074
gb|CA004218.1|CA004218 HS16O23r HS Hordeum vulgare subsp. v... 276 9e-073
gb|BQ657279.1|BQ657279 HA08P24u HA Hordeum vulgare subsp. v... 272 1e-071
gb|BU980722.1|BU980722 HA21H21r HA Hordeum vulgare subsp. v... 272 1e-071
gb|AL511812.1|AL511812 AL511812 Hordeum vulgare Barke devel... 260 6e-068
gb|BQ762017.1|BQ762017 EBpi01_SQ005_G15_R pistil, 1 DPA, no... 258 2e-067
gb|BU983868.1|BU983868 HA31E16r HA Hordeum vulgare subsp. v... 254 3e-066
gb|BM444349.1|BM444349 EBem09_SQ004_O08_R embryo, 1 Day ger... 252 1e-065
gb|CK123191.1|CK123191 BES1824102g09 BES1824 Hordeum vulgar... 252 1e-065
gb|BU979913.1|BU979913 HA17M09r HA Hordeum vulgare subsp. v... 250 5e-065
gb|BU979980.1|BU979980 HA18B15r HA Hordeum vulgare subsp. v... 250 5e-065
gb|CA002872.1|CA002872 HS08M09r HS Hordeum vulgare subsp. v... 250 5e-065
gb|BM101448.2|BM101448 EBpi01_SQ003_O03_R pistil, 1 DPA, no... 242 1e-062
gb|BM369182.2|BM369182 EBem07_SQ002_M23_R embryo, 28 DPA, n... 230 5e-059
gb|BI779277.2|BI779277 EBro01_SQ003_I14_R root, 3 week, hyd... 222 1e-056
gb|BI957724.1|BI957724 HVSMEn0010O10f Hordeum vulgare rachi... 220 5e-056
gb|BQ762041.1|BQ762041 EBpi01_SQ005_K17_R pistil, 1 DPA, no... 218 2e-055
gb|BM096803.2|BM096803 EBma07_SQ001_L08_R maternal, 21 DPA,... 206 7e-052
gb|BU982297.1|BU982297 HA26B14r HA Hordeum vulgare subsp. v... 200 4e-050
gb|BM373077.1|BM373077 EBma04_SQ003_A04_R maternal, 10 DPA,... 184 3e-045
gb|BJ474158.1|BJ474158 BJ474158 K. Sato unpublished cDNA li... 180 4e-044
gb|BU974937.1|BU974937 HB29J09r BC Hordeum vulgare subsp. v... 178 2e-043
gb|AJ433477.1|AJ433477 AJ433477 S00002 Hordeum vulgare subs... 174 3e-042
gb|CV053507.1|CV053507 BNEL100a8 Barley EST endosperm libra... 167 6e-040
gb|BM100270.1|BM100270 EBma01_SQ001_L05_R maternal, 4 DPA, ... 139 1e-031
gb|BQ660561.1|BQ660561 HI04D10u HI Hordeum vulgare subsp. v... 137 6e-031
gb|BG417204.2|BG417204 HVSMEk0016L18f Hordeum vulgare testa... 129 1e-028
gb|BJ466422.1|BJ466422 BJ466422 K. Sato unpublished cDNA li... 127 5e-028
gb|AV920158.1|AV920158 AV920158 K. Sato unpublished cDNA li... 115 2e-024
gb|CV055892.1|CV055892 BNEL124f11 Barley EST endosperm libr... 109 1e-022
gb|CV058738.1|CV058738 BNEL40c9 Barley EST endosperm librar... 109 1e-022
gb|CV060201.1|CV060201 BNEL55e5 Barley EST endosperm librar... 109 1e-022
gb|CV061556.1|CV061556 BNEL6C6 Barley EST endosperm library... 109 1e-022
gb|CV063447.1|CV063447 BNEL8D5 Barley EST endosperm library... 109 1e-022
gb|CK122806.1|CK122806 BES1824106a09 BES1824 Hordeum vulgar... 109 1e-022
gb|CA024249.1|CA024249 HZ48M14r HZ Hordeum vulgare subsp. v... 101 3e-020
gb|BI951411.1|BI951411 HVSMEl0025N15f Hordeum vulgare spike... 78 4e-013
gb|BQ766362.1|BQ766362 EBro08_SQ005_C24_R root, 3 week, dro... 72 3e-011
gb|CD663191.1|CD663191 UCRHV18_04cg02_b1 Drought-stressed D... 70 1e-010
gb|BQ766328.1|BQ766328 EBro08_SQ005_L18_R root, 3 week, dro... 68 4e-010
gb|BQ467546.1|BQ467546 HS04C02r HS Hordeum vulgare subsp. v... 52 3e-005
gb|BM374101.1|BM374101 EBma03_SQ003_K10_R maternal, 8 DPA, ... 38 0.38
gb|BM816954.1|BM816954 HC05C03_T3.ab1 HC Hordeum vulgare su... 38 0.38
gb|BJ469084.1|BJ469084 BJ469084 K. Sato unpublished cDNA li... 38 0.38
gb|BJ469496.1|BJ469496 BJ469496 K. Sato unpublished cDNA li... 38 0.38
gb|BJ469498.1|BJ469498 BJ469498 K. Sato unpublished cDNA li... 38 0.38
gb|BJ474793.1|BJ474793 BJ474793 K. Sato unpublished cDNA li... 38 0.38
gb|BJ474905.1|BJ474905 BJ474905 K. Sato unpublished cDNA li... 38 0.38
gb|BQ740128.1|BQ740128 HC108F02 HC Hordeum vulgare subsp. v... 38 0.38
gb|BM445119.2|BM445119 EBem09_SQ007_H22_R embryo, 1 Day ger... 38 0.38
gb|BI777215.2|BI777215 EBro03_SQ002_H10_R root, 3 week, wat... 38 0.38
gb|BM097437.2|BM097437 EBro05_SQ003_E03_R root, 3 week, red... 38 0.38
gb|BQ757445.1|BQ757445 EBem10_SQ004_C10_R embryo, 2 Day ger... 38 0.38
gb|BQ757940.1|BQ757940 EBem10_SQ005_M09_R embryo, 2 Day ger... 38 0.38
gb|BQ757944.1|BQ757944 EBem10_SQ005_M13_R embryo, 2 Day ger... 38 0.38
gb|BQ765784.1|BQ765784 EBro03_SQ008_L05_R root, 3 week, wat... 38 0.38
gb|BU969231.1|BU969231 HB10O24r BC Hordeum vulgare subsp. v... 38 0.38
gb|BU994424.1|BU994424 HM07A11r HM Hordeum vulgare subsp. v... 38 0.38
gb|BU994720.1|BU994720 HM07P14r HM Hordeum vulgare subsp. v... 38 0.38
gb|BU995506.1|BU995506 HM10H09r HM Hordeum vulgare subsp. v... 38 0.38
gb|CA025417.1|CA025417 HZ52B17r HZ Hordeum vulgare subsp. v... 38 0.38
gb|CB879946.1|CB879946 HM05A11w HM Hordeum vulgare subsp. v... 38 0.38
gb|CB881628.1|CB881628 HM10G10w HM Hordeum vulgare subsp. v... 38 0.38
gb|CD663392.1|CD663392 UCRHV18_05bd03_b1 Drought-stressed D... 38 0.38
gb|CK125866.1|CK125866 BES1824111A1e10 BES1824 Hordeum vulg... 38 0.38
gb|AY681974.1| Hordeum vulgare subsp. vulgare dehydrin 13 (... 38 0.38
>gb|AV913433.1|AV913433 AV913433 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags22a21 5', mRNA sequence
Length = 666
Score = 583 bits (294), Expect = e-165
Identities = 405/442 (91%)
Strand = Plus / Plus
Query: 86 cctccgccaccatggggaagacacgtggtatgggagctgggcgcaagctcaagacccacc 145
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77 cctccgccatcatggggaagacacgtggtatgggagctgggcgcaagctcaagacccacc 136
Query: 146 gcaggaaccagaggtgggctgacaaagcatacaagaagagccacttgggcaatgagtgga 205
|||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 137 gcaggaaccagaggtgggctgataaggcatacaagaagagccacttgggcaatgagtgga 196
Query: 206 aaaaaccttttgctggatcatctcacgccaagggcatcgttctggagaagattggtattg 265
| ||||| ||||||||||| ||||||||||||||||| || ||||||||||||||||||
Sbjct: 197 agaaaccctttgctggatcgtctcacgccaagggcattgtcttggagaagattggtattg 256
Query: 266 aggccaagcagccaaattcggccatccgtaagtgtgcccgtgttcagctggtgaagaatg 325
||||||||||||| || || ||||||||||||||||| ||||| |||||||||||||| |
Sbjct: 257 aggccaagcagcctaactctgccatccgtaagtgtgctcgtgtccagctggtgaagaacg 316
Query: 326 gaaagaagattgctgcctttgtgccgaatgatggttgcctaaactacatcgaggagaatg 385
| ||||||||||||||||||||||| || ||||||||||| |||| ||||||||| || |
Sbjct: 317 ggaagaagattgctgcctttgtgcctaacgatggttgcctgaacttcatcgaggaaaacg 376
Query: 386 atgaggtgttgattgctggatttggtcgtaagggtcatgctgtgggagacattcctggtg 445
| |||||| |||||||||| ||||||||||||||||| || ||||| || || |||||||
Sbjct: 377 acgaggtgctgattgctgggtttggtcgtaagggtcacgccgtgggtgatatccctggtg 436
Query: 446 tcaggttcaaggttgttaaggtgtctggtgtgtcgctgcttgcactcttcaaggagaaga 505
|||||||||||||||| ||||| ||||||||||| ||||| || |||||||| |||||||
Sbjct: 437 tcaggttcaaggttgtcaaggtatctggtgtgtccctgctggctctcttcaaagagaaga 496
Query: 506 aggagaagccaaggtcttagat 527
|||||||||| |||||||||||
Sbjct: 497 aggagaagcccaggtcttagat 518
>gb|AV913612.1|AV913612 AV913612 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags22l05 5', mRNA sequence
Length = 598
Score = 583 bits (294), Expect = e-165
Identities = 405/442 (91%)
Strand = Plus / Plus
Query: 86 cctccgccaccatggggaagacacgtggtatgggagctgggcgcaagctcaagacccacc 145
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cctccgccatcatggggaagacacgtggtatgggagctgggcgcaagctcaagacccacc 60
Query: 146 gcaggaaccagaggtgggctgacaaagcatacaagaagagccacttgggcaatgagtgga 205
|||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 61 gcaggaaccagaggtgggctgataaggcatacaagaagagccacttgggcaatgagtgga 120
Query: 206 aaaaaccttttgctggatcatctcacgccaagggcatcgttctggagaagattggtattg 265
| ||||| ||||||||||| ||||||||||||||||| || ||||||||||||||||||
Sbjct: 121 agaaaccctttgctggatcgtctcacgccaagggcattgtcttggagaagattggtattg 180
Query: 266 aggccaagcagccaaattcggccatccgtaagtgtgcccgtgttcagctggtgaagaatg 325
||||||||||||| || || ||||||||||||||||| ||||| |||||||||||||| |
Sbjct: 181 aggccaagcagcctaactctgccatccgtaagtgtgctcgtgtccagctggtgaagaacg 240
Query: 326 gaaagaagattgctgcctttgtgccgaatgatggttgcctaaactacatcgaggagaatg 385
| ||||||||||||||||||||||| || ||||||||||| |||| ||||||||| || |
Sbjct: 241 ggaagaagattgctgcctttgtgcctaacgatggttgcctgaacttcatcgaggaaaacg 300
Query: 386 atgaggtgttgattgctggatttggtcgtaagggtcatgctgtgggagacattcctggtg 445
| |||||| |||||||||| ||||||||||||||||| || ||||| || || |||||||
Sbjct: 301 acgaggtgctgattgctgggtttggtcgtaagggtcacgccgtgggtgatatccctggtg 360
Query: 446 tcaggttcaaggttgttaaggtgtctggtgtgtcgctgcttgcactcttcaaggagaaga 505
|||||||||||||||| ||||| ||||||||||| ||||| || |||||||| |||||||
Sbjct: 361 tcaggttcaaggttgtcaaggtatctggtgtgtccctgctggctctcttcaaagagaaga 420
Query: 506 aggagaagccaaggtcttagat 527
|||||||||| |||||||||||
Sbjct: 421 aggagaagcccaggtcttagat 442
>gb|BM374231.2|BM374231 EBpi03_SQ003_A15_R pistil, 4 DPA, no treatment, cv Optic, EBpi03
Hordeum vulgare subsp. vulgare cDNA clone
EBpi03_SQ003_A15 5', mRNA sequence
Length = 549
Score = 583 bits (294), Expect = e-165
Identities = 405/442 (91%)
Strand = Plus / Plus
Query: 86 cctccgccaccatggggaagacacgtggtatgggagctgggcgcaagctcaagacccacc 145
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14 cctccgccatcatggggaagacacgtggtatgggagctgggcgcaagctcaagacccacc 73
Query: 146 gcaggaaccagaggtgggctgacaaagcatacaagaagagccacttgggcaatgagtgga 205
|||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 74 gcaggaaccagaggtgggctgataaggcatacaagaagagccacttgggcaatgagtgga 133
Query: 206 aaaaaccttttgctggatcatctcacgccaagggcatcgttctggagaagattggtattg 265
| ||||| ||||||||||| ||||||||||||||||| || ||||||||||||||||||
Sbjct: 134 agaaaccctttgctggatcgtctcacgccaagggcattgtcttggagaagattggtattg 193
Query: 266 aggccaagcagccaaattcggccatccgtaagtgtgcccgtgttcagctggtgaagaatg 325
||||||||||||| || || ||||||||||||||||| ||||| |||||||||||||| |
Sbjct: 194 aggccaagcagcctaactctgccatccgtaagtgtgctcgtgtccagctggtgaagaacg 253
Query: 326 gaaagaagattgctgcctttgtgccgaatgatggttgcctaaactacatcgaggagaatg 385
| ||||||||||||||||||||||| || ||||||||||| |||| ||||||||| || |
Sbjct: 254 ggaagaagattgctgcctttgtgcctaacgatggttgcctgaacttcatcgaggaaaacg 313
Query: 386 atgaggtgttgattgctggatttggtcgtaagggtcatgctgtgggagacattcctggtg 445
| |||||| |||||||||| ||||||||||||||||| || ||||| || || |||||||
Sbjct: 314 acgaggtgctgattgctgggtttggtcgtaagggtcacgccgtgggtgatatccctggtg 373
Query: 446 tcaggttcaaggttgttaaggtgtctggtgtgtcgctgcttgcactcttcaaggagaaga 505
|||||||||||||||| ||||| ||||||||||| ||||| || |||||||| |||||||
Sbjct: 374 tcaggttcaaggttgtcaaggtatctggtgtgtccctgctggctctcttcaaagagaaga 433
Query: 506 aggagaagccaaggtcttagat 527
|||||||||| |||||||||||
Sbjct: 434 aggagaagcccaggtcttagat 455
>gb|BQ766896.1|BQ766896 EBro08_SQ007_M11_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ007_M11 5', mRNA sequence
Length = 711
Score = 583 bits (294), Expect = e-165
Identities = 405/442 (91%)
Strand = Plus / Plus
Query: 86 cctccgccaccatggggaagacacgtggtatgggagctgggcgcaagctcaagacccacc 145
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80 cctccgccatcatggggaagacacgtggtatgggagctgggcgcaagctcaagacccacc 139
Query: 146 gcaggaaccagaggtgggctgacaaagcatacaagaagagccacttgggcaatgagtgga 205
|||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 140 gcaggaaccagaggtgggctgataaggcatacaagaagagccacttgggcaatgagtgga 199
Query: 206 aaaaaccttttgctggatcatctcacgccaagggcatcgttctggagaagattggtattg 265
| ||||| ||||||||||| ||||||||||||||||| || ||||||||||||||||||
Sbjct: 200 agaaaccctttgctggatcgtctcacgccaagggcattgtcttggagaagattggtattg 259
Query: 266 aggccaagcagccaaattcggccatccgtaagtgtgcccgtgttcagctggtgaagaatg 325
||||||||||||| || || ||||||||||||||||| ||||| |||||||||||||| |
Sbjct: 260 aggccaagcagcctaactctgccatccgtaagtgtgctcgtgtccagctggtgaagaacg 319
Query: 326 gaaagaagattgctgcctttgtgccgaatgatggttgcctaaactacatcgaggagaatg 385
| ||||||||||||||||||||||| || ||||||||||| |||| ||||||||| || |
Sbjct: 320 ggaagaagattgctgcctttgtgcctaacgatggttgcctgaacttcatcgaggaaaacg 379
Query: 386 atgaggtgttgattgctggatttggtcgtaagggtcatgctgtgggagacattcctggtg 445
| |||||| |||||||||| ||||||||||||||||| || ||||| || || |||||||
Sbjct: 380 acgaggtgctgattgctgggtttggtcgtaagggtcacgccgtgggtgatatccctggtg 439
Query: 446 tcaggttcaaggttgttaaggtgtctggtgtgtcgctgcttgcactcttcaaggagaaga 505
|||||||||||||||| ||||| ||||||||||| ||||| || |||||||| |||||||
Sbjct: 440 tcaggttcaaggttgtcaaggtatctggtgtgtccctgctggctctcttcaaagagaaga 499
Query: 506 aggagaagccaaggtcttagat 527
|||||||||| |||||||||||
Sbjct: 500 aggagaagcccaggtcttagat 521
>gb|BU988118.1|BU988118 HF16L12r HF Hordeum vulgare subsp. vulgare cDNA clone HF16L12
5-PRIME, mRNA sequence
Length = 614
Score = 583 bits (294), Expect = e-165
Identities = 405/442 (91%)
Strand = Plus / Plus
Query: 86 cctccgccaccatggggaagacacgtggtatgggagctgggcgcaagctcaagacccacc 145
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 cctccgccatcatggggaagacacgtggtatgggagctgggcgcaagctcaagacccacc 119
Query: 146 gcaggaaccagaggtgggctgacaaagcatacaagaagagccacttgggcaatgagtgga 205
|||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 120 gcaggaaccagaggtgggctgataaggcatacaagaagagccacttgggcaatgagtgga 179
Query: 206 aaaaaccttttgctggatcatctcacgccaagggcatcgttctggagaagattggtattg 265
| ||||| ||||||||||| ||||||||||||||||| || ||||||||||||||||||
Sbjct: 180 agaaaccctttgctggatcgtctcacgccaagggcattgtcttggagaagattggtattg 239
Query: 266 aggccaagcagccaaattcggccatccgtaagtgtgcccgtgttcagctggtgaagaatg 325
||||||||||||| || || ||||||||||||||||| ||||| |||||||||||||| |
Sbjct: 240 aggccaagcagcctaactctgccatccgtaagtgtgctcgtgtccagctggtgaagaacg 299
Query: 326 gaaagaagattgctgcctttgtgccgaatgatggttgcctaaactacatcgaggagaatg 385
| ||||||||||||||||||||||| || ||||||||||| |||| ||||||||| || |
Sbjct: 300 ggaagaagattgctgcctttgtgcctaacgatggttgcctgaacttcatcgaggaaaacg 359
Query: 386 atgaggtgttgattgctggatttggtcgtaagggtcatgctgtgggagacattcctggtg 445
| |||||| |||||||||| ||||||||||||||||| || ||||| || || |||||||
Sbjct: 360 acgaggtgctgattgctgggtttggtcgtaagggtcacgccgtgggtgatatccctggtg 419
Query: 446 tcaggttcaaggttgttaaggtgtctggtgtgtcgctgcttgcactcttcaaggagaaga 505
|||||||||||||||| ||||| ||||||||||| ||||| || |||||||| |||||||
Sbjct: 420 tcaggttcaaggttgtcaaggtatctggtgtgtccctgctggctctcttcaaagagaaga 479
Query: 506 aggagaagccaaggtcttagat 527
|||||||||| |||||||||||
Sbjct: 480 aggagaagcccaggtcttagat 501
>gb|BU996059.1|BU996059 HM12E22r HM Hordeum vulgare subsp. vulgare cDNA clone HM12E22
5-PRIME, mRNA sequence
Length = 596
Score = 583 bits (294), Expect = e-165
Identities = 405/442 (91%)
Strand = Plus / Plus
Query: 86 cctccgccaccatggggaagacacgtggtatgggagctgggcgcaagctcaagacccacc 145
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 cctccgccatcatggggaagacacgtggtatgggagctgggcgcaagctcaagacccacc 148
Query: 146 gcaggaaccagaggtgggctgacaaagcatacaagaagagccacttgggcaatgagtgga 205
|||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 149 gcaggaaccagaggtgggctgataaggcatacaagaagagccacttgggcaatgagtgga 208
Query: 206 aaaaaccttttgctggatcatctcacgccaagggcatcgttctggagaagattggtattg 265
| ||||| ||||||||||| ||||||||||||||||| || ||||||||||||||||||
Sbjct: 209 agaaaccctttgctggatcgtctcacgccaagggcattgtcttggagaagattggtattg 268
Query: 266 aggccaagcagccaaattcggccatccgtaagtgtgcccgtgttcagctggtgaagaatg 325
||||||||||||| || || ||||||||||||||||| ||||| |||||||||||||| |
Sbjct: 269 aggccaagcagcctaactctgccatccgtaagtgtgctcgtgtccagctggtgaagaacg 328
Query: 326 gaaagaagattgctgcctttgtgccgaatgatggttgcctaaactacatcgaggagaatg 385
| ||||||||||||||||||||||| || ||||||||||| |||| ||||||||| || |
Sbjct: 329 ggaagaagattgctgcctttgtgcctaacgatggttgcctgaacttcatcgaggaaaacg 388
Query: 386 atgaggtgttgattgctggatttggtcgtaagggtcatgctgtgggagacattcctggtg 445
| |||||| |||||||||| ||||||||||||||||| || ||||| || || |||||||
Sbjct: 389 acgaggtgctgattgctgggtttggtcgtaagggtcacgccgtgggtgatatccctggtg 448
Query: 446 tcaggttcaaggttgttaaggtgtctggtgtgtcgctgcttgcactcttcaaggagaaga 505
|||||||||||||||| ||||| ||||||||||| ||||| || |||||||| |||||||
Sbjct: 449 tcaggttcaaggttgtcaaggtatctggtgtgtccctgctggctctcttcaaagagaaga 508
Query: 506 aggagaagccaaggtcttagat 527
|||||||||| |||||||||||
Sbjct: 509 aggagaagcccaggtcttagat 530
>gb|CB878523.1|CB878523 HP08N17T HP Hordeum vulgare subsp. vulgare cDNA clone HP08N17
5-PRIME, mRNA sequence
Length = 621
Score = 583 bits (294), Expect = e-165
Identities = 405/442 (91%)
Strand = Plus / Plus
Query: 86 cctccgccaccatggggaagacacgtggtatgggagctgggcgcaagctcaagacccacc 145
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67 cctccgccatcatggggaagacacgtggtatgggagctgggcgcaagctcaagacccacc 126
Query: 146 gcaggaaccagaggtgggctgacaaagcatacaagaagagccacttgggcaatgagtgga 205
|||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 127 gcaggaaccagaggtgggctgataaggcatacaagaagagccacttgggcaatgagtgga 186
Query: 206 aaaaaccttttgctggatcatctcacgccaagggcatcgttctggagaagattggtattg 265
| ||||| ||||||||||| ||||||||||||||||| || ||||||||||||||||||
Sbjct: 187 agaaaccctttgctggatcgtctcacgccaagggcattgtcttggagaagattggtattg 246
Query: 266 aggccaagcagccaaattcggccatccgtaagtgtgcccgtgttcagctggtgaagaatg 325
||||||||||||| || || ||||||||||||||||| ||||| |||||||||||||| |
Sbjct: 247 aggccaagcagcctaactctgccatccgtaagtgtgctcgtgtccagctggtgaagaacg 306
Query: 326 gaaagaagattgctgcctttgtgccgaatgatggttgcctaaactacatcgaggagaatg 385
| ||||||||||||||||||||||| || ||||||||||| |||| ||||||||| || |
Sbjct: 307 ggaagaagattgctgcctttgtgcctaacgatggttgcctgaacttcatcgaggaaaacg 366
Query: 386 atgaggtgttgattgctggatttggtcgtaagggtcatgctgtgggagacattcctggtg 445
| |||||| |||||||||| ||||||||||||||||| || ||||| || || |||||||
Sbjct: 367 acgaggtgctgattgctgggtttggtcgtaagggtcacgccgtgggtgatatccctggtg 426
Query: 446 tcaggttcaaggttgttaaggtgtctggtgtgtcgctgcttgcactcttcaaggagaaga 505
|||||||||||||||| ||||| ||||||||||| ||||| || |||||||| |||||||
Sbjct: 427 tcaggttcaaggttgtcaaggtatctggtgtgtccctgctggctctcttcaaagagaaga 486
Query: 506 aggagaagccaaggtcttagat 527
|||||||||| |||||||||||
Sbjct: 487 aggagaagcccaggtcttagat 508
>gb|CV057432.1|CV057432 BNEL27g4 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL27g4 5' similar to 40S ribosomal
protein S23, mRNA sequence
Length = 556
Score = 583 bits (294), Expect = e-165
Identities = 405/442 (91%)
Strand = Plus / Plus
Query: 86 cctccgccaccatggggaagacacgtggtatgggagctgggcgcaagctcaagacccacc 145
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cctccgccatcatggggaagacacgtggtatgggagctgggcgcaagctcaagacccacc 120
Query: 146 gcaggaaccagaggtgggctgacaaagcatacaagaagagccacttgggcaatgagtgga 205
|||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 121 gcaggaaccagaggtgggctgataaggcatacaagaagagccacttgggcaatgagtgga 180
Query: 206 aaaaaccttttgctggatcatctcacgccaagggcatcgttctggagaagattggtattg 265
| ||||| ||||||||||| ||||| ||||||||||| || ||||||||||||||||||
Sbjct: 181 agaaaccctttgctggatcgtctcatgccaagggcattgtcttggagaagattggtattg 240
Query: 266 aggccaagcagccaaattcggccatccgtaagtgtgcccgtgttcagctggtgaagaatg 325
||||||||||||| || || ||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 241 aggccaagcagcctaactctgccatccgtaagtgtgctcgtgtccagctggtgaagaatg 300
Query: 326 gaaagaagattgctgcctttgtgccgaatgatggttgcctaaactacatcgaggagaatg 385
| |||||||| |||||||||||||| |||||||||||||| |||| ||||||||| || |
Sbjct: 301 ggaagaagatcgctgcctttgtgcctaatgatggttgcctgaacttcatcgaggaaaacg 360
Query: 386 atgaggtgttgattgctggatttggtcgtaagggtcatgctgtgggagacattcctggtg 445
| |||||| |||||||||| ||||||||||||||||| || ||||| || || |||||||
Sbjct: 361 acgaggtgctgattgctgggtttggtcgtaagggtcacgccgtgggtgatatccctggtg 420
Query: 446 tcaggttcaaggttgttaaggtgtctggtgtgtcgctgcttgcactcttcaaggagaaga 505
|||||||||||||||| ||||| ||||||||||| ||||| || |||||||| |||||||
Sbjct: 421 tcaggttcaaggttgtcaaggtatctggtgtgtccctgctggctctcttcaaagagaaga 480
Query: 506 aggagaagccaaggtcttagat 527
|||||||||| |||||||||||
Sbjct: 481 aggagaagcccaggtcttagat 502
>gb|CV058183.1|CV058183 BNEL35c11 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL35c11 5' similar to 40S ribosomal
protein S23, mRNA sequence
Length = 611
Score = 583 bits (294), Expect = e-165
Identities = 405/442 (91%)
Strand = Plus / Plus
Query: 86 cctccgccaccatggggaagacacgtggtatgggagctgggcgcaagctcaagacccacc 145
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cctccgccatcatggggaagacacgtggtatgggagctgggcgcaagctcaagacccacc 120
Query: 146 gcaggaaccagaggtgggctgacaaagcatacaagaagagccacttgggcaatgagtgga 205
|||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 121 gcaggaaccagaggtgggctgataaggcatacaagaagagccacttgggcaatgagtgga 180
Query: 206 aaaaaccttttgctggatcatctcacgccaagggcatcgttctggagaagattggtattg 265
| ||||| ||||||||||| ||||| ||||||||||| || ||||||||||||||||||
Sbjct: 181 agaaaccctttgctggatcgtctcatgccaagggcattgtcttggagaagattggtattg 240
Query: 266 aggccaagcagccaaattcggccatccgtaagtgtgcccgtgttcagctggtgaagaatg 325
||||||||||||| || || ||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 241 aggccaagcagcctaactctgccatccgtaagtgtgctcgtgtccagctggtgaagaatg 300
Query: 326 gaaagaagattgctgcctttgtgccgaatgatggttgcctaaactacatcgaggagaatg 385
| |||||||| |||||||||||||| |||||||||||||| |||| ||||||||| || |
Sbjct: 301 ggaagaagatcgctgcctttgtgcctaatgatggttgcctgaacttcatcgaggaaaacg 360
Query: 386 atgaggtgttgattgctggatttggtcgtaagggtcatgctgtgggagacattcctggtg 445
| |||||| |||||||||| ||||||||||||||||| || ||||| || || |||||||
Sbjct: 361 acgaggtgctgattgctgggtttggtcgtaagggtcacgccgtgggtgatatccctggtg 420
Query: 446 tcaggttcaaggttgttaaggtgtctggtgtgtcgctgcttgcactcttcaaggagaaga 505
|||||||||||||||| ||||| ||||||||||| ||||| || |||||||| |||||||
Sbjct: 421 tcaggttcaaggttgtcaaggtatctggtgtgtccctgctggctctcttcaaagagaaga 480
Query: 506 aggagaagccaaggtcttagat 527
|||||||||| |||||||||||
Sbjct: 481 aggagaagcccaggtcttagat 502
>gb|CV058553.1|CV058553 BNEL39c2 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL39c2 5' similar to 40S ribosomal
protein S23, mRNA sequence
Length = 590
Score = 583 bits (294), Expect = e-165
Identities = 405/442 (91%)
Strand = Plus / Plus
Query: 86 cctccgccaccatggggaagacacgtggtatgggagctgggcgcaagctcaagacccacc 145
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cctccgccatcatggggaagacacgtggtatgggagctgggcgcaagctcaagacccacc 120
Query: 146 gcaggaaccagaggtgggctgacaaagcatacaagaagagccacttgggcaatgagtgga 205
|||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 121 gcaggaaccagaggtgggctgataaggcatacaagaagagccacttgggcaatgagtgga 180
Query: 206 aaaaaccttttgctggatcatctcacgccaagggcatcgttctggagaagattggtattg 265
| ||||| ||||||||||| ||||| ||||||||||| || ||||||||||||||||||
Sbjct: 181 agaaaccctttgctggatcgtctcatgccaagggcattgtcttggagaagattggtattg 240
Query: 266 aggccaagcagccaaattcggccatccgtaagtgtgcccgtgttcagctggtgaagaatg 325
||||||||||||| || || ||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 241 aggccaagcagcctaactctgccatccgtaagtgtgctcgtgtccagctggtgaagaatg 300
Query: 326 gaaagaagattgctgcctttgtgccgaatgatggttgcctaaactacatcgaggagaatg 385
| |||||||| |||||||||||||| |||||||||||||| |||| ||||||||| || |
Sbjct: 301 ggaagaagatcgctgcctttgtgcctaatgatggttgcctgaacttcatcgaggaaaacg 360
Query: 386 atgaggtgttgattgctggatttggtcgtaagggtcatgctgtgggagacattcctggtg 445
| |||||| |||||||||| ||||||||||||||||| || ||||| || || |||||||
Sbjct: 361 acgaggtgctgattgctgggtttggtcgtaagggtcacgccgtgggtgatatccctggtg 420
Query: 446 tcaggttcaaggttgttaaggtgtctggtgtgtcgctgcttgcactcttcaaggagaaga 505
|||||||||||||||| ||||| ||||||||||| ||||| || |||||||| |||||||
Sbjct: 421 tcaggttcaaggttgtcaaggtatctggtgtgtccctgctggctctcttcaaagagaaga 480
Query: 506 aggagaagccaaggtcttagat 527
|||||||||| |||||||||||
Sbjct: 481 aggagaagcccaggtcttagat 502
>gb|CV060112.1|CV060112 BNEL54e8 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL54e8 5' similar to 40S ribosomal
protein S23, mRNA sequence
Length = 612
Score = 583 bits (294), Expect = e-165
Identities = 405/442 (91%)
Strand = Plus / Plus
Query: 86 cctccgccaccatggggaagacacgtggtatgggagctgggcgcaagctcaagacccacc 145
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cctccgccatcatggggaagacacgtggtatgggagctgggcgcaagctcaagacccacc 120
Query: 146 gcaggaaccagaggtgggctgacaaagcatacaagaagagccacttgggcaatgagtgga 205
|||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 121 gcaggaaccagaggtgggctgataaggcatacaagaagagccacttgggcaatgagtgga 180
Query: 206 aaaaaccttttgctggatcatctcacgccaagggcatcgttctggagaagattggtattg 265
| ||||| ||||||||||| ||||| ||||||||||| || ||||||||||||||||||
Sbjct: 181 agaaaccctttgctggatcgtctcatgccaagggcattgtcttggagaagattggtattg 240
Query: 266 aggccaagcagccaaattcggccatccgtaagtgtgcccgtgttcagctggtgaagaatg 325
||||||||||||| || || ||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 241 aggccaagcagcctaactctgccatccgtaagtgtgctcgtgtccagctggtgaagaatg 300
Query: 326 gaaagaagattgctgcctttgtgccgaatgatggttgcctaaactacatcgaggagaatg 385
| |||||||| |||||||||||||| |||||||||||||| |||| ||||||||| || |
Sbjct: 301 ggaagaagatcgctgcctttgtgcctaatgatggttgcctgaacttcatcgaggaaaacg 360
Query: 386 atgaggtgttgattgctggatttggtcgtaagggtcatgctgtgggagacattcctggtg 445
| |||||| |||||||||| ||||||||||||||||| || ||||| || || |||||||
Sbjct: 361 acgaggtgctgattgctgggtttggtcgtaagggtcacgccgtgggtgatatccctggtg 420
Query: 446 tcaggttcaaggttgttaaggtgtctggtgtgtcgctgcttgcactcttcaaggagaaga 505
|||||||||||||||| ||||| ||||||||||| ||||| || |||||||| |||||||
Sbjct: 421 tcaggttcaaggttgtcaaggtatctggtgtgtccctgctggctctcttcaaagagaaga 480
Query: 506 aggagaagccaaggtcttagat 527
|||||||||| |||||||||||
Sbjct: 481 aggagaagcccaggtcttagat 502
>gb|CV060512.1|CV060512 BNEL59a1 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL59a1 5' similar to 40S ribosomal
protein S23, mRNA sequence
Length = 620
Score = 583 bits (294), Expect = e-165
Identities = 405/442 (91%)
Strand = Plus / Plus
Query: 86 cctccgccaccatggggaagacacgtggtatgggagctgggcgcaagctcaagacccacc 145
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cctccgccatcatggggaagacacgtggtatgggagctgggcgcaagctcaagacccacc 120
Query: 146 gcaggaaccagaggtgggctgacaaagcatacaagaagagccacttgggcaatgagtgga 205
|||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 121 gcaggaaccagaggtgggctgataaggcatacaagaagagccacttgggcaatgagtgga 180
Query: 206 aaaaaccttttgctggatcatctcacgccaagggcatcgttctggagaagattggtattg 265
| ||||| ||||||||||| ||||| ||||||||||| || ||||||||||||||||||
Sbjct: 181 agaaaccctttgctggatcgtctcatgccaagggcattgtcttggagaagattggtattg 240
Query: 266 aggccaagcagccaaattcggccatccgtaagtgtgcccgtgttcagctggtgaagaatg 325
||||||||||||| || || ||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 241 aggccaagcagcctaactctgccatccgtaagtgtgctcgtgtccagctggtgaagaatg 300
Query: 326 gaaagaagattgctgcctttgtgccgaatgatggttgcctaaactacatcgaggagaatg 385
| |||||||| |||||||||||||| |||||||||||||| |||| ||||||||| || |
Sbjct: 301 ggaagaagatcgctgcctttgtgcctaatgatggttgcctgaacttcatcgaggaaaacg 360
Query: 386 atgaggtgttgattgctggatttggtcgtaagggtcatgctgtgggagacattcctggtg 445
| |||||| |||||||||| ||||||||||||||||| || ||||| || || |||||||
Sbjct: 361 acgaggtgctgattgctgggtttggtcgtaagggtcacgccgtgggtgatatccctggtg 420
Query: 446 tcaggttcaaggttgttaaggtgtctggtgtgtcgctgcttgcactcttcaaggagaaga 505
|||||||||||||||| ||||| ||||||||||| ||||| || |||||||| |||||||
Sbjct: 421 tcaggttcaaggttgtcaaggtatctggtgtgtccctgctggctctcttcaaagagaaga 480
Query: 506 aggagaagccaaggtcttagat 527
|||||||||| |||||||||||
Sbjct: 481 aggagaagcccaggtcttagat 502
>gb|CV060741.1|CV060741 BNEL60f2 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL60f2 5' similar to 40S ribosomal
protein S23, mRNA sequence
Length = 619
Score = 583 bits (294), Expect = e-165
Identities = 405/442 (91%)
Strand = Plus / Plus
Query: 86 cctccgccaccatggggaagacacgtggtatgggagctgggcgcaagctcaagacccacc 145
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 cctccgccatcatggggaagacacgtggtatgggagctgggcgcaagctcaagacccacc 123
Query: 146 gcaggaaccagaggtgggctgacaaagcatacaagaagagccacttgggcaatgagtgga 205
|||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 124 gcaggaaccagaggtgggctgataaggcatacaagaagagccacttgggcaatgagtgga 183
Query: 206 aaaaaccttttgctggatcatctcacgccaagggcatcgttctggagaagattggtattg 265
| ||||| ||||||||||| ||||| ||||||||||| || ||||||||||||||||||
Sbjct: 184 agaaaccctttgctggatcgtctcatgccaagggcattgtcttggagaagattggtattg 243
Query: 266 aggccaagcagccaaattcggccatccgtaagtgtgcccgtgttcagctggtgaagaatg 325
||||||||||||| || || ||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 244 aggccaagcagcctaactctgccatccgtaagtgtgctcgtgtccagctggtgaagaatg 303
Query: 326 gaaagaagattgctgcctttgtgccgaatgatggttgcctaaactacatcgaggagaatg 385
| |||||||| |||||||||||||| |||||||||||||| |||| ||||||||| || |
Sbjct: 304 ggaagaagatcgctgcctttgtgcctaatgatggttgcctgaacttcatcgaggaaaacg 363
Query: 386 atgaggtgttgattgctggatttggtcgtaagggtcatgctgtgggagacattcctggtg 445
| |||||| |||||||||| ||||||||||||||||| || ||||| || || |||||||
Sbjct: 364 acgaggtgctgattgctgggtttggtcgtaagggtcacgccgtgggtgatatccctggtg 423
Query: 446 tcaggttcaaggttgttaaggtgtctggtgtgtcgctgcttgcactcttcaaggagaaga 505
|||||||||||||||| ||||| ||||||||||| ||||| || |||||||| |||||||
Sbjct: 424 tcaggttcaaggttgtcaaggtatctggtgtgtccctgctggctctcttcaaagagaaga 483
Query: 506 aggagaagccaaggtcttagat 527
|||||||||| |||||||||||
Sbjct: 484 aggagaagcccaggtcttagat 505
>gb|BF623129.3|BF623129 HVSMEa0014J20f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0014J20f, mRNA sequence
Length = 713
Score = 575 bits (290), Expect = e-163
Identities = 401/438 (91%)
Strand = Plus / Plus
Query: 90 cgccaccatggggaagacacgtggtatgggagctgggcgcaagctcaagacccaccgcag 149
||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 cgccaacatgggtaagacacgtggtatgggagctgggcgcaagctcaagacccaccgcag 131
Query: 150 gaaccagaggtgggctgacaaagcatacaagaagagccacttgggcaatgagtggaaaaa 209
||||||||||||||| ||||| ||||||||||||||||||||||| || |||||||| ||
Sbjct: 132 gaaccagaggtgggcagacaaggcatacaagaagagccacttgggtaacgagtggaagaa 191
Query: 210 accttttgctggatcatctcacgccaagggcatcgttctggagaagattggtattgaggc 269
|| || ||||| |||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 192 gcccttcgctgggtcatctcacgccaagggcattgttttggagaagattggtattgaggc 251
Query: 270 caagcagccaaattcggccatccgtaagtgtgcccgtgttcagctggtgaagaatggaaa 329
||||||||| || || ||||||||||||||||| ||||| ||||| ||||||||||||||
Sbjct: 252 caagcagcctaactctgccatccgtaagtgtgctcgtgtccagcttgtgaagaatggaaa 311
Query: 330 gaagattgctgcctttgtgccgaatgatggttgcctaaactacatcgaggagaatgatga 389
|||||||||||| || || || |||||||||||||| |||| ||||||||| ||||| ||
Sbjct: 312 gaagattgctgctttcgttcccaatgatggttgcctgaacttcatcgaggaaaatgacga 371
Query: 390 ggtgttgattgctggatttggtcgtaagggtcatgctgtgggagacattcctggtgtcag 449
|||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||| |
Sbjct: 372 ggtgttgattgctggattcggtcgtaagggacatgctgtgggagatattcctggtgtccg 431
Query: 450 gttcaaggttgttaaggtgtctggtgtgtcgctgcttgcactcttcaaggagaagaagga 509
||||||||| || ||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 432 gttcaaggtcgtcaaggtgtctggtgtgtctctgcttgccctcttcaaggagaagaagga 491
Query: 510 gaagccaaggtcttagat 527
||| || |||||||||||
Sbjct: 492 gaaacccaggtcttagat 509
>gb|BM374939.1|BM374939 EBma05_SQ003_L05_R maternal, 12 DPA, no treatment, cv Optic, EBma05
Hordeum vulgare subsp. vulgare cDNA clone
EBma05_SQ003_L05 5', mRNA sequence
Length = 532
Score = 575 bits (290), Expect = e-163
Identities = 401/438 (91%)
Strand = Plus / Plus
Query: 90 cgccaccatggggaagacacgtggtatgggagctgggcgcaagctcaagacccaccgcag 149
||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 cgccaacatgggtaagacacgtggtatgggagctgggcgcaagctcaagacccaccgcag 132
Query: 150 gaaccagaggtgggctgacaaagcatacaagaagagccacttgggcaatgagtggaaaaa 209
||||||||||||||| ||||| ||||||||||||||||||||||| || |||||||| ||
Sbjct: 133 gaaccagaggtgggcagacaaggcatacaagaagagccacttgggtaacgagtggaagaa 192
Query: 210 accttttgctggatcatctcacgccaagggcatcgttctggagaagattggtattgaggc 269
|| || ||||| |||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 193 gcccttcgctgggtcatctcacgccaagggcattgttttggagaagattggtattgaggc 252
Query: 270 caagcagccaaattcggccatccgtaagtgtgcccgtgttcagctggtgaagaatggaaa 329
||||||||| || || ||||||||||||||||| ||||| ||||| ||||||||||||||
Sbjct: 253 caagcagcctaactctgccatccgtaagtgtgctcgtgtccagcttgtgaagaatggaaa 312
Query: 330 gaagattgctgcctttgtgccgaatgatggttgcctaaactacatcgaggagaatgatga 389
|||||||||||| || || || |||||||||||||| |||| ||||||||| ||||| ||
Sbjct: 313 gaagattgctgctttcgttcccaatgatggttgcctgaacttcatcgaggaaaatgacga 372
Query: 390 ggtgttgattgctggatttggtcgtaagggtcatgctgtgggagacattcctggtgtcag 449
|||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||| |
Sbjct: 373 ggtgttgattgctggattcggtcgtaagggacatgctgtgggagatattcctggtgtccg 432
Query: 450 gttcaaggttgttaaggtgtctggtgtgtcgctgcttgcactcttcaaggagaagaagga 509
||||||||| || ||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 433 gttcaaggtcgtcaaggtgtctggtgtgtctctgcttgccctcttcaaggagaagaagga 492
Query: 510 gaagccaaggtcttagat 527
||| || |||||||||||
Sbjct: 493 gaaacccaggtcttagat 510
>gb|AV917410.1|AV917410 AV917410 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags18m21 5', mRNA sequence
Length = 637
Score = 575 bits (290), Expect = e-163
Identities = 401/438 (91%)
Strand = Plus / Plus
Query: 90 cgccaccatggggaagacacgtggtatgggagctgggcgcaagctcaagacccaccgcag 149
||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 cgccaacatgggtaagacacgtggtatgggagctgggcgcaagctcaagacccaccgcag 72
Query: 150 gaaccagaggtgggctgacaaagcatacaagaagagccacttgggcaatgagtggaaaaa 209
||||||||||||||| ||||| ||||||||||||||||||||||| || |||||||| ||
Sbjct: 73 gaaccagaggtgggcagacaaggcatacaagaagagccacttgggtaacgagtggaagaa 132
Query: 210 accttttgctggatcatctcacgccaagggcatcgttctggagaagattggtattgaggc 269
|| || ||||| |||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 133 gcccttcgctgggtcatctcacgccaagggcattgttttggagaagattggtattgaggc 192
Query: 270 caagcagccaaattcggccatccgtaagtgtgcccgtgttcagctggtgaagaatggaaa 329
||||||||| || || ||||||||||||||||| ||||| ||||| ||||||||||||||
Sbjct: 193 caagcagcctaactctgccatccgtaagtgtgctcgtgtccagcttgtgaagaatggaaa 252
Query: 330 gaagattgctgcctttgtgccgaatgatggttgcctaaactacatcgaggagaatgatga 389
|||||||||||| || || || |||||||||||||| |||| ||||||||| ||||| ||
Sbjct: 253 gaagattgctgctttcgttcccaatgatggttgcctgaacttcatcgaggaaaatgacga 312
Query: 390 ggtgttgattgctggatttggtcgtaagggtcatgctgtgggagacattcctggtgtcag 449
|||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||| |
Sbjct: 313 ggtgttgattgctggattcggtcgtaagggacatgctgtgggagatattcctggtgtccg 372
Query: 450 gttcaaggttgttaaggtgtctggtgtgtcgctgcttgcactcttcaaggagaagaagga 509
||||||||| || ||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 373 gttcaaggtcgtcaaggtgtctggtgtgtctctgcttgccctcttcaaggagaagaagga 432
Query: 510 gaagccaaggtcttagat 527
||| || |||||||||||
Sbjct: 433 gaaacccaggtcttagat 450
>gb|AV922589.1|AV922589 AV922589 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags18m21 3', mRNA sequence
Length = 576
Score = 575 bits (290), Expect = e-163
Identities = 401/438 (91%)
Strand = Plus / Minus
Query: 90 cgccaccatggggaagacacgtggtatgggagctgggcgcaagctcaagacccaccgcag 149
||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 cgccaacatgggtaagacacgtggtatgggagctgggcgcaagctcaagacccaccgcag 505
Query: 150 gaaccagaggtgggctgacaaagcatacaagaagagccacttgggcaatgagtggaaaaa 209
||||||||||||||| ||||| ||||||||||||||||||||||| || |||||||| ||
Sbjct: 504 gaaccagaggtgggcagacaaggcatacaagaagagccacttgggtaacgagtggaagaa 445
Query: 210 accttttgctggatcatctcacgccaagggcatcgttctggagaagattggtattgaggc 269
|| || ||||| |||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 444 gcccttcgctgggtcatctcacgccaagggcattgttttggagaagattggtattgaggc 385
Query: 270 caagcagccaaattcggccatccgtaagtgtgcccgtgttcagctggtgaagaatggaaa 329
||||||||| || || ||||||||||||||||| ||||| ||||| ||||||||||||||
Sbjct: 384 caagcagcctaactctgccatccgtaagtgtgctcgtgtccagcttgtgaagaatggaaa 325
Query: 330 gaagattgctgcctttgtgccgaatgatggttgcctaaactacatcgaggagaatgatga 389
|||||||||||| || || || |||||||||||||| |||| ||||||||| ||||| ||
Sbjct: 324 gaagattgctgctttcgttcccaatgatggttgcctgaacttcatcgaggaaaatgacga 265
Query: 390 ggtgttgattgctggatttggtcgtaagggtcatgctgtgggagacattcctggtgtcag 449
|||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||| |
Sbjct: 264 ggtgttgattgctggattcggtcgtaagggacatgctgtgggagatattcctggtgtccg 205
Query: 450 gttcaaggttgttaaggtgtctggtgtgtcgctgcttgcactcttcaaggagaagaagga 509
||||||||| || ||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 204 gttcaaggtcgtcaaggtgtctggtgtgtctctgcttgccctcttcaaggagaagaagga 145
Query: 510 gaagccaaggtcttagat 527
||| || |||||||||||
Sbjct: 144 gaaacccaggtcttagat 127
>gb|AV925376.1|AV925376 AV925376 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd22p05 5', mRNA sequence
Length = 666
Score = 575 bits (290), Expect = e-163
Identities = 401/438 (91%)
Strand = Plus / Plus
Query: 90 cgccaccatggggaagacacgtggtatgggagctgggcgcaagctcaagacccaccgcag 149
||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 cgccaacatgggtaagacacgtggtatgggagctgggcgcaagctcaagacccaccgcag 132
Query: 150 gaaccagaggtgggctgacaaagcatacaagaagagccacttgggcaatgagtggaaaaa 209
||||||||||||||| ||||| ||||||||||||||||||||||| || |||||||| ||
Sbjct: 133 gaaccagaggtgggcagacaaggcatacaagaagagccacttgggtaacgagtggaagaa 192
Query: 210 accttttgctggatcatctcacgccaagggcatcgttctggagaagattggtattgaggc 269
|| || ||||| |||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 193 gcccttcgctgggtcatctcacgccaagggcattgttttggagaagattggtattgaggc 252
Query: 270 caagcagccaaattcggccatccgtaagtgtgcccgtgttcagctggtgaagaatggaaa 329
||||||||| || || ||||||||||||||||| ||||| ||||| ||||||||||||||
Sbjct: 253 caagcagcctaactctgccatccgtaagtgtgctcgtgtccagcttgtgaagaatggaaa 312
Query: 330 gaagattgctgcctttgtgccgaatgatggttgcctaaactacatcgaggagaatgatga 389
|||||||||||| || || || |||||||||||||| |||| ||||||||| ||||| ||
Sbjct: 313 gaagattgctgctttcgttcccaatgatggttgcctgaacttcatcgaggaaaatgacga 372
Query: 390 ggtgttgattgctggatttggtcgtaagggtcatgctgtgggagacattcctggtgtcag 449
|||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||| |
Sbjct: 373 ggtgttgattgctggattcggtcgtaagggacatgctgtgggagatattcctggtgtccg 432
Query: 450 gttcaaggttgttaaggtgtctggtgtgtcgctgcttgcactcttcaaggagaagaagga 509
||||||||| || ||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 433 gttcaaggtcgtcaaggtgtctggtgtgtctctgcttgccctcttcaaggagaagaagga 492
Query: 510 gaagccaaggtcttagat 527
||| || |||||||||||
Sbjct: 493 gaaacccaggtcttagat 510
>gb|AV931726.1|AV931726 AV931726 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd23p05 3', mRNA sequence
Length = 629
Score = 575 bits (290), Expect = e-163
Identities = 401/438 (91%)
Strand = Plus / Minus
Query: 90 cgccaccatggggaagacacgtggtatgggagctgggcgcaagctcaagacccaccgcag 149
||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 cgccaacatgggtaagacacgtggtatgggagctgggcgcaagctcaagacccaccgcag 547
Query: 150 gaaccagaggtgggctgacaaagcatacaagaagagccacttgggcaatgagtggaaaaa 209
||||||||||||||| ||||| ||||||||||||||||||||||| || |||||||| ||
Sbjct: 546 gaaccagaggtgggcagacaaggcatacaagaagagccacttgggtaacgagtggaagaa 487
Query: 210 accttttgctggatcatctcacgccaagggcatcgttctggagaagattggtattgaggc 269
|| || ||||| |||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 486 gcccttcgctgggtcatctcacgccaagggcattgttttggagaagattggtattgaggc 427
Query: 270 caagcagccaaattcggccatccgtaagtgtgcccgtgttcagctggtgaagaatggaaa 329
||||||||| || || ||||||||||||||||| ||||| ||||| ||||||||||||||
Sbjct: 426 caagcagcctaactctgccatccgtaagtgtgctcgtgtccagcttgtgaagaatggaaa 367
Query: 330 gaagattgctgcctttgtgccgaatgatggttgcctaaactacatcgaggagaatgatga 389
|||||||||||| || || || |||||||||||||| |||| ||||||||| ||||| ||
Sbjct: 366 gaagattgctgctttcgttcccaatgatggttgcctgaacttcatcgaggaaaatgacga 307
Query: 390 ggtgttgattgctggatttggtcgtaagggtcatgctgtgggagacattcctggtgtcag 449
|||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||| |
Sbjct: 306 ggtgttgattgctggattcggtcgtaagggacatgctgtgggagatattcctggtgtccg 247
Query: 450 gttcaaggttgttaaggtgtctggtgtgtcgctgcttgcactcttcaaggagaagaagga 509
||||||||| || ||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 246 gttcaaggtcgtcaaggtgtctggtgtgtctctgcttgccctcttcaaggagaagaagga 187
Query: 510 gaagccaaggtcttagat 527
||| || |||||||||||
Sbjct: 186 gaaacccaggtcttagat 169
>gb|BJ471556.1|BJ471556 BJ471556 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal19e24 5', mRNA sequence
Length = 631
Score = 575 bits (290), Expect = e-163
Identities = 401/438 (91%)
Strand = Plus / Plus
Query: 90 cgccaccatggggaagacacgtggtatgggagctgggcgcaagctcaagacccaccgcag 149
||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74 cgccaacatgggtaagacacgtggtatgggagctgggcgcaagctcaagacccaccgcag 133
Query: 150 gaaccagaggtgggctgacaaagcatacaagaagagccacttgggcaatgagtggaaaaa 209
||||||||||||||| ||||| ||||||||||||||||||||||| || |||||||| ||
Sbjct: 134 gaaccagaggtgggcagacaaggcatacaagaagagccacttgggtaacgagtggaagaa 193
Query: 210 accttttgctggatcatctcacgccaagggcatcgttctggagaagattggtattgaggc 269
|| || ||||| |||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 194 gcccttcgctgggtcatctcacgccaagggcattgttttggagaagattggtattgaggc 253
Query: 270 caagcagccaaattcggccatccgtaagtgtgcccgtgttcagctggtgaagaatggaaa 329
||||||||| || || ||||||||||||||||| ||||| ||||| ||||||||||||||
Sbjct: 254 caagcagcctaactctgccatccgtaagtgtgctcgtgtccagcttgtgaagaatggaaa 313
Query: 330 gaagattgctgcctttgtgccgaatgatggttgcctaaactacatcgaggagaatgatga 389
|||||||||||| || || || |||||||||||||| |||| ||||||||| ||||| ||
Sbjct: 314 gaagattgctgctttcgttcccaatgatggttgcctgaacttcatcgaggaaaatgacga 373
Query: 390 ggtgttgattgctggatttggtcgtaagggtcatgctgtgggagacattcctggtgtcag 449
|||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||| |
Sbjct: 374 ggtgttgattgctggattcggtcgtaagggacatgctgtgggagatattcctggtgtccg 433
Query: 450 gttcaaggttgttaaggtgtctggtgtgtcgctgcttgcactcttcaaggagaagaagga 509
||||||||| || ||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 434 gttcaaggtcgtcaaggtgtctggtgtgtctctgcttgccctcttcaaggagaagaagga 493
Query: 510 gaagccaaggtcttagat 527
||| || |||||||||||
Sbjct: 494 gaaacccaggtcttagat 511
>gb|BJ474154.1|BJ474154 BJ474154 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal19e24 3', mRNA sequence
Length = 679
Score = 575 bits (290), Expect = e-163
Identities = 401/438 (91%)
Strand = Plus / Minus
Query: 90 cgccaccatggggaagacacgtggtatgggagctgggcgcaagctcaagacccaccgcag 149
||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 cgccaacatgggtaagacacgtggtatgggagctgggcgcaagctcaagacccaccgcag 550
Query: 150 gaaccagaggtgggctgacaaagcatacaagaagagccacttgggcaatgagtggaaaaa 209
||||||||||||||| ||||| ||||||||||||||||||||||| || |||||||| ||
Sbjct: 549 gaaccagaggtgggcagacaaggcatacaagaagagccacttgggtaacgagtggaagaa 490
Query: 210 accttttgctggatcatctcacgccaagggcatcgttctggagaagattggtattgaggc 269
|| || ||||| |||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 489 gcccttcgctgggtcatctcacgccaagggcattgttttggagaagattggtattgaggc 430
Query: 270 caagcagccaaattcggccatccgtaagtgtgcccgtgttcagctggtgaagaatggaaa 329
||||||||| || || ||||||||||||||||| ||||| ||||| ||||||||||||||
Sbjct: 429 caagcagcctaactctgccatccgtaagtgtgctcgtgtccagcttgtgaagaatggaaa 370
Query: 330 gaagattgctgcctttgtgccgaatgatggttgcctaaactacatcgaggagaatgatga 389
|||||||||||| || || || |||||||||||||| |||| ||||||||| ||||| ||
Sbjct: 369 gaagattgctgctttcgttcccaatgatggttgcctgaacttcatcgaggaaaatgacga 310
Query: 390 ggtgttgattgctggatttggtcgtaagggtcatgctgtgggagacattcctggtgtcag 449
|||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||| |
Sbjct: 309 ggtgttgattgctggattcggtcgtaagggacatgctgtgggagatattcctggtgtccg 250
Query: 450 gttcaaggttgttaaggtgtctggtgtgtcgctgcttgcactcttcaaggagaagaagga 509
||||||||| || ||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 249 gttcaaggtcgtcaaggtgtctggtgtgtctctgcttgccctcttcaaggagaagaagga 190
Query: 510 gaagccaaggtcttagat 527
||| || |||||||||||
Sbjct: 189 gaaacccaggtcttagat 172
>gb|BM377511.2|BM377511 EBem04_SQ003_F17_R embryo, 12 DPA, no treatment, cv Optic, EBem04
Hordeum vulgare subsp. vulgare cDNA clone
EBem04_SQ003_F17 5', mRNA sequence
Length = 538
Score = 575 bits (290), Expect = e-163
Identities = 401/438 (91%)
Strand = Plus / Plus
Query: 90 cgccaccatggggaagacacgtggtatgggagctgggcgcaagctcaagacccaccgcag 149
||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66 cgccaacatgggtaagacacgtggtatgggagctgggcgcaagctcaagacccaccgcag 125
Query: 150 gaaccagaggtgggctgacaaagcatacaagaagagccacttgggcaatgagtggaaaaa 209
||||||||||||||| ||||| ||||||||||||||||||||||| || |||||||| ||
Sbjct: 126 gaaccagaggtgggcagacaaggcatacaagaagagccacttgggtaacgagtggaagaa 185
Query: 210 accttttgctggatcatctcacgccaagggcatcgttctggagaagattggtattgaggc 269
|| || ||||| |||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 186 gcccttcgctgggtcatctcacgccaagggcattgttttggagaagattggtattgaggc 245
Query: 270 caagcagccaaattcggccatccgtaagtgtgcccgtgttcagctggtgaagaatggaaa 329
||||||||| || || ||||||||||||||||| ||||| ||||| ||||||||||||||
Sbjct: 246 caagcagcctaactctgccatccgtaagtgtgctcgtgtccagcttgtgaagaatggaaa 305
Query: 330 gaagattgctgcctttgtgccgaatgatggttgcctaaactacatcgaggagaatgatga 389
|||||||||||| || || || |||||||||||||| |||| ||||||||| ||||| ||
Sbjct: 306 gaagattgctgctttcgttcccaatgatggttgcctgaacttcatcgaggaaaatgacga 365
Query: 390 ggtgttgattgctggatttggtcgtaagggtcatgctgtgggagacattcctggtgtcag 449
|||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||| |
Sbjct: 366 ggtgttgattgctggattcggtcgtaagggacatgctgtgggagatattcctggtgtccg 425
Query: 450 gttcaaggttgttaaggtgtctggtgtgtcgctgcttgcactcttcaaggagaagaagga 509
||||||||| || ||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 426 gttcaaggtcgtcaaggtgtctggtgtgtctctgcttgccctcttcaaggagaagaagga 485
Query: 510 gaagccaaggtcttagat 527
||| || |||||||||||
Sbjct: 486 gaaacccaggtcttagat 503
>gb|BM374024.2|BM374024 EBma03_SQ003_G16_R maternal, 8 DPA, no treatment, cv Optic, EBma03
Hordeum vulgare subsp. vulgare cDNA clone
EBma03_SQ003_G16 5', mRNA sequence
Length = 546
Score = 575 bits (290), Expect = e-163
Identities = 401/438 (91%)
Strand = Plus / Plus
Query: 90 cgccaccatggggaagacacgtggtatgggagctgggcgcaagctcaagacccaccgcag 149
||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 cgccaacatgggtaagacacgtggtatgggagctgggcgcaagctcaagacccaccgcag 132
Query: 150 gaaccagaggtgggctgacaaagcatacaagaagagccacttgggcaatgagtggaaaaa 209
||||||||||||||| ||||| ||||||||||||||||||||||| || |||||||| ||
Sbjct: 133 gaaccagaggtgggcagacaaggcatacaagaagagccacttgggtaacgagtggaagaa 192
Query: 210 accttttgctggatcatctcacgccaagggcatcgttctggagaagattggtattgaggc 269
|| || ||||| |||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 193 gcccttcgctgggtcatctcacgccaagggcattgttttggagaagattggtattgaggc 252
Query: 270 caagcagccaaattcggccatccgtaagtgtgcccgtgttcagctggtgaagaatggaaa 329
||||||||| || || ||||||||||||||||| ||||| ||||| ||||||||||||||
Sbjct: 253 caagcagcctaactctgccatccgtaagtgtgctcgtgtccagcttgtgaagaatggaaa 312
Query: 330 gaagattgctgcctttgtgccgaatgatggttgcctaaactacatcgaggagaatgatga 389
|||||||||||| || || || |||||||||||||| |||| ||||||||| ||||| ||
Sbjct: 313 gaagattgctgctttcgttcccaatgatggttgcctgaacttcatcgaggaaaatgacga 372
Query: 390 ggtgttgattgctggatttggtcgtaagggtcatgctgtgggagacattcctggtgtcag 449
|||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||| |
Sbjct: 373 ggtgttgattgctggattcggtcgtaagggacatgctgtgggagatattcctggtgtccg 432
Query: 450 gttcaaggttgttaaggtgtctggtgtgtcgctgcttgcactcttcaaggagaagaagga 509
||||||||| || ||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 433 gttcaaggtcgtcaaggtgtctggtgtgtctctgcttgccctcttcaaggagaagaagga 492
Query: 510 gaagccaaggtcttagat 527
||| || |||||||||||
Sbjct: 493 gaaacccaggtcttagat 510
>gb|BM372709.2|BM372709 EBpi05_SQ003_L12_R pistil, 8 DPA, no treatment, cv Optic, EBpi05
Hordeum vulgare subsp. vulgare cDNA clone
EBpi05_SQ003_L12 5', mRNA sequence
Length = 542
Score = 575 bits (290), Expect = e-163
Identities = 401/438 (91%)
Strand = Plus / Plus
Query: 90 cgccaccatggggaagacacgtggtatgggagctgggcgcaagctcaagacccaccgcag 149
||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 cgccaacatgggtaagacacgtggtatgggagctgggcgcaagctcaagacccaccgcag 128
Query: 150 gaaccagaggtgggctgacaaagcatacaagaagagccacttgggcaatgagtggaaaaa 209
||||||||||||||| ||||| ||||||||||||||||||||||| || |||||||| ||
Sbjct: 129 gaaccagaggtgggcagacaaggcatacaagaagagccacttgggtaacgagtggaagaa 188
Query: 210 accttttgctggatcatctcacgccaagggcatcgttctggagaagattggtattgaggc 269
|| || ||||| |||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 189 gcccttcgctgggtcatctcacgccaagggcattgttttggagaagattggtattgaggc 248
Query: 270 caagcagccaaattcggccatccgtaagtgtgcccgtgttcagctggtgaagaatggaaa 329
||||||||| || || ||||||||||||||||| ||||| ||||| ||||||||||||||
Sbjct: 249 caagcagcctaactctgccatccgtaagtgtgctcgtgtccagcttgtgaagaatggaaa 308
Query: 330 gaagattgctgcctttgtgccgaatgatggttgcctaaactacatcgaggagaatgatga 389
|||||||||||| || || || |||||||||||||| |||| ||||||||| ||||| ||
Sbjct: 309 gaagattgctgctttcgttcccaatgatggttgcctgaacttcatcgaggaaaatgacga 368
Query: 390 ggtgttgattgctggatttggtcgtaagggtcatgctgtgggagacattcctggtgtcag 449
|||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||| |
Sbjct: 369 ggtgttgattgctggattcggtcgtaagggacatgctgtgggagatattcctggtgtccg 428
Query: 450 gttcaaggttgttaaggtgtctggtgtgtcgctgcttgcactcttcaaggagaagaagga 509
||||||||| || ||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 429 gttcaaggtcgtcaaggtgtctggtgtgtctctgcttgccctcttcaaggagaagaagga 488
Query: 510 gaagccaaggtcttagat 527
||| || |||||||||||
Sbjct: 489 gaaacccaggtcttagat 506
>gb|BQ763503.1|BQ763503 EBro02_SQ008_G18_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ008_G18 5', mRNA sequence
Length = 571
Score = 575 bits (290), Expect = e-163
Identities = 405/442 (91%), Gaps = 1/442 (0%)
Strand = Plus / Plus
Query: 86 cctccgccaccatggggaagacacgtggtatgggagctgggcgcaagctcaagacccacc 145
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99 cctccgccatcatggggaagacacgtggtatgggagctgggcgcaagctcaagacccacc 158
Query: 146 gcaggaaccagaggtgggctgacaaagcatacaagaagagccacttgggcaatgagtgga 205
|||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 159 gcaggaaccagaggtgggctgataaggcatacaagaagagccacttgggcaatgagtgga 218
Query: 206 aaaaaccttttgctggatcatctcacgccaagggcatcgttctggagaagattggtattg 265
| ||||| ||||||||||| ||||||||||||||||| || ||||||||||||||||||
Sbjct: 219 agaaaccctttgctggatcgtctcacgccaagggcattgtcttggagaagattggtattg 278
Query: 266 aggccaagcagccaaattcggccatccgtaagtgtgcccgtgttcagctggtgaagaatg 325
||||||||||||| || || ||||||||||||||||| ||||| |||||||||||||| |
Sbjct: 279 aggccaagcagcctaactctgccatccgtaagtgtgctcgtgtccagctggtgaagaacg 338
Query: 326 gaaagaagattgctgcctttgtgccgaatgatggttgcctaaactacatcgaggagaatg 385
| ||||||||||||||||||||||| || ||||||||||| |||| ||||||||| || |
Sbjct: 339 ggaagaagattgctgcctttgtgcctaacgatggttgcctgaacttcatcgaggaaaacg 398
Query: 386 atgaggtgttgattgctggatttggtcgtaagggtcatgctgtgggagacattcctggtg 445
| |||||| |||||||||| ||||||||||||||||| || ||||| || || |||||||
Sbjct: 399 acgaggtgctgattgctgggtttggtcgtaagggtcacgccgtgggtgatatccctggtg 458
Query: 446 tcaggttcaaggttgttaaggtgtctggtgtgtcgctgcttgcactcttcaaggagaaga 505
|||||||||||||||| ||||| ||||||||||| ||||| || |||||||| |||||||
Sbjct: 459 tcaggttcaaggttgtcaaggtatctggtgtgtccctgctggctctcttcaa-gagaaga 517
Query: 506 aggagaagccaaggtcttagat 527
|||||||||| |||||||||||
Sbjct: 518 aggagaagcccaggtcttagat 539
>gb|CV054259.1|CV054259 BNEL108e4 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL108e4 5' similar to 40S ribosomal
protein S23, mRNA sequence
Length = 593
Score = 575 bits (290), Expect = e-163
Identities = 401/438 (91%)
Strand = Plus / Plus
Query: 90 cgccaccatggggaagacacgtggtatgggagctgggcgcaagctcaagacccaccgcag 149
||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77 cgccaacatgggtaagacacgtggtatgggagctgggcgcaagctcaagacccaccgcag 136
Query: 150 gaaccagaggtgggctgacaaagcatacaagaagagccacttgggcaatgagtggaaaaa 209
||||||||||||||| ||||| ||||||||||||||||||||||| || |||||||| ||
Sbjct: 137 gaaccagaggtgggcagacaaggcatacaagaagagccacttgggtaacgagtggaagaa 196
Query: 210 accttttgctggatcatctcacgccaagggcatcgttctggagaagattggtattgaggc 269
|| || ||||| |||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 197 gcccttcgctgggtcatctcacgccaagggcattgttttggagaagattggtattgaggc 256
Query: 270 caagcagccaaattcggccatccgtaagtgtgcccgtgttcagctggtgaagaatggaaa 329
||||||||| || || ||||||||||||||||| ||||| ||||| ||||||||||||||
Sbjct: 257 caagcagcctaactctgccatccgtaagtgtgctcgtgtccagcttgtgaagaatggaaa 316
Query: 330 gaagattgctgcctttgtgccgaatgatggttgcctaaactacatcgaggagaatgatga 389
|||||||||||| || || || |||||||||||||| |||| ||||||||| ||||| ||
Sbjct: 317 gaagattgctgctttcgttcccaatgatggttgcctgaacttcatcgaggaaaatgacga 376
Query: 390 ggtgttgattgctggatttggtcgtaagggtcatgctgtgggagacattcctggtgtcag 449
|||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||| |
Sbjct: 377 ggtgttgattgctggattcggtcgtaagggacatgctgtgggagatattcctggtgtccg 436
Query: 450 gttcaaggttgttaaggtgtctggtgtgtcgctgcttgcactcttcaaggagaagaagga 509
||||||||| || ||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 437 gttcaaggtcgtcaaggtgtctggtgtgtctctgcttgccctcttcaaggagaagaagga 496
Query: 510 gaagccaaggtcttagat 527
||| || |||||||||||
Sbjct: 497 gaaacccaggtcttagat 514
>gb|CV056755.1|CV056755 BNEL20c2 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL20c2 5' similar to 40S ribosomal
protein S23, mRNA sequence
Length = 625
Score = 575 bits (290), Expect = e-163
Identities = 401/438 (91%)
Strand = Plus / Plus
Query: 90 cgccaccatggggaagacacgtggtatgggagctgggcgcaagctcaagacccaccgcag 149
||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 cgccaacatgggtaagacacgtggtatgggagctgggcgcaagctcaagacccaccgcag 130
Query: 150 gaaccagaggtgggctgacaaagcatacaagaagagccacttgggcaatgagtggaaaaa 209
||||||||||||||| ||||| ||||||||||||||||||||||| || |||||||| ||
Sbjct: 131 gaaccagaggtgggcagacaaggcatacaagaagagccacttgggtaacgagtggaagaa 190
Query: 210 accttttgctggatcatctcacgccaagggcatcgttctggagaagattggtattgaggc 269
|| || ||||| |||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 191 gcccttcgctgggtcatctcacgccaagggcattgttttggagaagattggtattgaggc 250
Query: 270 caagcagccaaattcggccatccgtaagtgtgcccgtgttcagctggtgaagaatggaaa 329
||||||||| || || ||||||||||||||||| ||||| ||||| ||||||||||||||
Sbjct: 251 caagcagcctaactctgccatccgtaagtgtgctcgtgtccagcttgtgaagaatggaaa 310
Query: 330 gaagattgctgcctttgtgccgaatgatggttgcctaaactacatcgaggagaatgatga 389
|||||||||||| || || || |||||||||||||| |||| ||||||||| ||||| ||
Sbjct: 311 gaagattgctgctttcgttcccaatgatggttgcctgaacttcatcgaggaaaatgacga 370
Query: 390 ggtgttgattgctggatttggtcgtaagggtcatgctgtgggagacattcctggtgtcag 449
|||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||| |
Sbjct: 371 ggtgttgattgctggattcggtcgtaagggacatgctgtgggagatattcctggtgtccg 430
Query: 450 gttcaaggttgttaaggtgtctggtgtgtcgctgcttgcactcttcaaggagaagaagga 509
||||||||| || ||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 431 gttcaaggtcgtcaaggtgtctggtgtgtctctgcttgccctcttcaaggagaagaagga 490
Query: 510 gaagccaaggtcttagat 527
||| || |||||||||||
Sbjct: 491 gaaacccaggtcttagat 508
>gb|CV059230.1|CV059230 BNEL45h1 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL45h1 5' similar to 40S ribosomal
protein S23, mRNA sequence
Length = 637
Score = 575 bits (290), Expect = e-163
Identities = 401/438 (91%)
Strand = Plus / Plus
Query: 90 cgccaccatggggaagacacgtggtatgggagctgggcgcaagctcaagacccaccgcag 149
||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77 cgccaacatgggtaagacacgtggtatgggagctgggcgcaagctcaagacccaccgcag 136
Query: 150 gaaccagaggtgggctgacaaagcatacaagaagagccacttgggcaatgagtggaaaaa 209
||||||||||||||| ||||| ||||||||||||||||||||||| || |||||||| ||
Sbjct: 137 gaaccagaggtgggcagacaaggcatacaagaagagccacttgggtaacgagtggaagaa 196
Query: 210 accttttgctggatcatctcacgccaagggcatcgttctggagaagattggtattgaggc 269
|| || ||||| |||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 197 gcccttcgctgggtcatctcacgccaagggcattgttttggagaagattggtattgaggc 256
Query: 270 caagcagccaaattcggccatccgtaagtgtgcccgtgttcagctggtgaagaatggaaa 329
||||||||| || || ||||||||||||||||| ||||| ||||| ||||||||||||||
Sbjct: 257 caagcagcctaactctgccatccgtaagtgtgctcgtgtccagcttgtgaagaatggaaa 316
Query: 330 gaagattgctgcctttgtgccgaatgatggttgcctaaactacatcgaggagaatgatga 389
|||||||||||| || || || |||||||||||||| |||| ||||||||| ||||| ||
Sbjct: 317 gaagattgctgctttcgttcccaatgatggttgcctgaacttcatcgaggaaaatgacga 376
Query: 390 ggtgttgattgctggatttggtcgtaagggtcatgctgtgggagacattcctggtgtcag 449
|||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||| |
Sbjct: 377 ggtgttgattgctggattcggtcgtaagggacatgctgtgggagatattcctggtgtccg 436
Query: 450 gttcaaggttgttaaggtgtctggtgtgtcgctgcttgcactcttcaaggagaagaagga 509
||||||||| || ||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 437 gttcaaggtcgtcaaggtgtctggtgtgtctctgcttgccctcttcaaggagaagaagga 496
Query: 510 gaagccaaggtcttagat 527
||| || |||||||||||
Sbjct: 497 gaaacccaggtcttagat 514
>gb|CV061169.1|CV061169 BNEL65g1 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL65g1 5' similar to 40S ribosomal
protein S23, mRNA sequence
Length = 596
Score = 575 bits (290), Expect = e-163
Identities = 401/438 (91%)
Strand = Plus / Plus
Query: 90 cgccaccatggggaagacacgtggtatgggagctgggcgcaagctcaagacccaccgcag 149
||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67 cgccaacatgggtaagacacgtggtatgggagctgggcgcaagctcaagacccaccgcag 126
Query: 150 gaaccagaggtgggctgacaaagcatacaagaagagccacttgggcaatgagtggaaaaa 209
||||||||||||||| ||||| ||||||||||||||||||||||| || |||||||| ||
Sbjct: 127 gaaccagaggtgggcagacaaggcatacaagaagagccacttgggtaacgagtggaagaa 186
Query: 210 accttttgctggatcatctcacgccaagggcatcgttctggagaagattggtattgaggc 269
|| || ||||| |||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 187 gcccttcgctgggtcatctcacgccaagggcattgttttggagaagattggtattgaggc 246
Query: 270 caagcagccaaattcggccatccgtaagtgtgcccgtgttcagctggtgaagaatggaaa 329
||||||||| || || ||||||||||||||||| ||||| ||||| ||||||||||||||
Sbjct: 247 caagcagcctaactctgccatccgtaagtgtgctcgtgtccagcttgtgaagaatggaaa 306
Query: 330 gaagattgctgcctttgtgccgaatgatggttgcctaaactacatcgaggagaatgatga 389
|||||||||||| || || || |||||||||||||| |||| ||||||||| ||||| ||
Sbjct: 307 gaagattgctgctttcgttcccaatgatggttgcctgaacttcatcgaggaaaatgacga 366
Query: 390 ggtgttgattgctggatttggtcgtaagggtcatgctgtgggagacattcctggtgtcag 449
|||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||| |
Sbjct: 367 ggtgttgattgctggattcggtcgtaagggacatgctgtgggagatattcctggtgtccg 426
Query: 450 gttcaaggttgttaaggtgtctggtgtgtcgctgcttgcactcttcaaggagaagaagga 509
||||||||| || ||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 427 gttcaaggtcgtcaaggtgtctggtgtgtctctgcttgccctcttcaaggagaagaagga 486
Query: 510 gaagccaaggtcttagat 527
||| || |||||||||||
Sbjct: 487 gaaacccaggtcttagat 504
>gb|CV062841.1|CV062841 BNEL83f5 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL83f5 5' similar to 40S ribosomal
protein S23, mRNA sequence
Length = 587
Score = 575 bits (290), Expect = e-163
Identities = 401/438 (91%)
Strand = Plus / Plus
Query: 90 cgccaccatggggaagacacgtggtatgggagctgggcgcaagctcaagacccaccgcag 149
||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 58 cgccaacatgggtaagacacgtggtatgggagctgggcgcaagctcaagacccaccgcag 117
Query: 150 gaaccagaggtgggctgacaaagcatacaagaagagccacttgggcaatgagtggaaaaa 209
||||||||||||||| ||||| ||||||||||||||||||||||| || |||||||| ||
Sbjct: 118 gaaccagaggtgggcagacaaggcatacaagaagagccacttgggtaacgagtggaagaa 177
Query: 210 accttttgctggatcatctcacgccaagggcatcgttctggagaagattggtattgaggc 269
|| || ||||| |||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 178 gcccttcgctgggtcatctcacgccaagggcattgttttggagaagattggtattgaggc 237
Query: 270 caagcagccaaattcggccatccgtaagtgtgcccgtgttcagctggtgaagaatggaaa 329
||||||||| || || ||||||||||||||||| ||||| ||||| ||||||||||||||
Sbjct: 238 caagcagcctaactctgccatccgtaagtgtgctcgtgtccagcttgtgaagaatggaaa 297
Query: 330 gaagattgctgcctttgtgccgaatgatggttgcctaaactacatcgaggagaatgatga 389
|||||||||||| || || || |||||||||||||| |||| ||||||||| ||||| ||
Sbjct: 298 gaagattgctgctttcgttcccaatgatggttgcctgaacttcatcgaggaaaatgacga 357
Query: 390 ggtgttgattgctggatttggtcgtaagggtcatgctgtgggagacattcctggtgtcag 449
|||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||| |
Sbjct: 358 ggtgttgattgctggattcggtcgtaagggacatgctgtgggagatattcctggtgtccg 417
Query: 450 gttcaaggttgttaaggtgtctggtgtgtcgctgcttgcactcttcaaggagaagaagga 509
||||||||| || ||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 418 gttcaaggtcgtcaaggtgtctggtgtgtctctgcttgccctcttcaaggagaagaagga 477
Query: 510 gaagccaaggtcttagat 527
||| || |||||||||||
Sbjct: 478 gaaacccaggtcttagat 495
>gb|CV064203.1|CV064203 BNEL99c12 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL99c12 5' similar to 40S ribosomal
protein S23, mRNA sequence
Length = 674
Score = 575 bits (290), Expect = e-163
Identities = 401/438 (91%)
Strand = Plus / Plus
Query: 90 cgccaccatggggaagacacgtggtatgggagctgggcgcaagctcaagacccaccgcag 149
||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 58 cgccaacatgggtaagacacgtggtatgggagctgggcgcaagctcaagacccaccgcag 117
Query: 150 gaaccagaggtgggctgacaaagcatacaagaagagccacttgggcaatgagtggaaaaa 209
||||||||||||||| ||||| ||||||||||||||||||||||| || |||||||| ||
Sbjct: 118 gaaccagaggtgggcagacaaggcatacaagaagagccacttgggtaacgagtggaagaa 177
Query: 210 accttttgctggatcatctcacgccaagggcatcgttctggagaagattggtattgaggc 269
|| || ||||| |||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 178 gcccttcgctgggtcatctcacgccaagggcattgttttggagaagattggtattgaggc 237
Query: 270 caagcagccaaattcggccatccgtaagtgtgcccgtgttcagctggtgaagaatggaaa 329
||||||||| || || ||||||||||||||||| ||||| ||||| ||||||||||||||
Sbjct: 238 caagcagcctaactctgccatccgtaagtgtgctcgtgtccagcttgtgaagaatggaaa 297
Query: 330 gaagattgctgcctttgtgccgaatgatggttgcctaaactacatcgaggagaatgatga 389
|||||||||||| || || || |||||||||||||| |||| ||||||||| ||||| ||
Sbjct: 298 gaagattgctgctttcgttcccaatgatggttgcctgaacttcatcgaggaaaatgacga 357
Query: 390 ggtgttgattgctggatttggtcgtaagggtcatgctgtgggagacattcctggtgtcag 449
|||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||| |
Sbjct: 358 ggtgttgattgctggattcggtcgtaagggacatgctgtgggagatattcctggtgtccg 417
Query: 450 gttcaaggttgttaaggtgtctggtgtgtcgctgcttgcactcttcaaggagaagaagga 509
||||||||| || ||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 418 gttcaaggtcgtcaaggtgtctggtgtgtctctgcttgccctcttcaaggagaagaagga 477
Query: 510 gaagccaaggtcttagat 527
||| || |||||||||||
Sbjct: 478 gaaacccaggtcttagat 495
>gb|BU981588.1|BU981588 HA24B01r HA Hordeum vulgare subsp. vulgare cDNA clone HA24B01
5-PRIME, mRNA sequence
Length = 516
Score = 571 bits (288), Expect = e-161
Identities = 399/436 (91%)
Strand = Plus / Plus
Query: 86 cctccgccaccatggggaagacacgtggtatgggagctgggcgcaagctcaagacccacc 145
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81 cctccgccatcatggggaagacacgtggtatgggagctgggcgcaagctcaagacccacc 140
Query: 146 gcaggaaccagaggtgggctgacaaagcatacaagaagagccacttgggcaatgagtgga 205
|||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 141 gcaggaaccagaggtgggctgataaggcatacaagaagagccacttgggcaatgagtgga 200
Query: 206 aaaaaccttttgctggatcatctcacgccaagggcatcgttctggagaagattggtattg 265
| ||||| ||||||||||| ||||||||||||||||| || ||||||||||||||||||
Sbjct: 201 agaaaccctttgctggatcgtctcacgccaagggcattgtcttggagaagattggtattg 260
Query: 266 aggccaagcagccaaattcggccatccgtaagtgtgcccgtgttcagctggtgaagaatg 325
||||||||||||| || || ||||||||||||||||| ||||| |||||||||||||| |
Sbjct: 261 aggccaagcagcctaactctgccatccgtaagtgtgctcgtgtccagctggtgaagaacg 320
Query: 326 gaaagaagattgctgcctttgtgccgaatgatggttgcctaaactacatcgaggagaatg 385
| ||||||||||||||||||||||| || ||||||||||| |||| ||||||||| || |
Sbjct: 321 ggaagaagattgctgcctttgtgcctaacgatggttgcctgaacttcatcgaggaaaacg 380
Query: 386 atgaggtgttgattgctggatttggtcgtaagggtcatgctgtgggagacattcctggtg 445
| |||||| |||||||||| ||||||||||||||||| || ||||| || || |||||||
Sbjct: 381 acgaggtgctgattgctgggtttggtcgtaagggtcacgccgtgggtgatatccctggtg 440
Query: 446 tcaggttcaaggttgttaaggtgtctggtgtgtcgctgcttgcactcttcaaggagaaga 505
|||||||||||||||| ||||| ||||||||||| ||||| || |||||||| |||||||
Sbjct: 441 tcaggttcaaggttgtcaaggtatctggtgtgtccctgctggctctcttcaaagagaaga 500
Query: 506 aggagaagccaaggtc 521
|||||||||| |||||
Sbjct: 501 aggagaagcccaggtc 516
>gb|BM375816.2|BM375816 EBem06_SQ004_H24_R embryo, 21 DPA, no treatment, cv Optic, EBem06
Hordeum vulgare subsp. vulgare cDNA clone
EBem06_SQ004_H24 5', mRNA sequence
Length = 555
Score = 569 bits (287), Expect = e-161
Identities = 398/435 (91%)
Strand = Plus / Plus
Query: 90 cgccaccatggggaagacacgtggtatgggagctgggcgcaagctcaagacccaccgcag 149
||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 cgccaacatgggtaagacacgtggtatgggagctgggcgcaagctcaagacccaccgcag 121
Query: 150 gaaccagaggtgggctgacaaagcatacaagaagagccacttgggcaatgagtggaaaaa 209
||||||||||||||| ||||| ||||||||||||||||||||||| || |||||||| ||
Sbjct: 122 gaaccagaggtgggcagacaaggcatacaagaagagccacttgggtaacgagtggaagaa 181
Query: 210 accttttgctggatcatctcacgccaagggcatcgttctggagaagattggtattgaggc 269
|| || ||||| |||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 182 gcccttcgctgggtcatctcacgccaagggcattgttttggagaagattggtattgaggc 241
Query: 270 caagcagccaaattcggccatccgtaagtgtgcccgtgttcagctggtgaagaatggaaa 329
||||||||| || || ||||||||||||||||| ||||| ||||| ||||||||||||||
Sbjct: 242 caagcagcctaactctgccatccgtaagtgtgctcgtgtccagcttgtgaagaatggaaa 301
Query: 330 gaagattgctgcctttgtgccgaatgatggttgcctaaactacatcgaggagaatgatga 389
|||||||||||| || || || |||||||||||||| |||| ||||||||| ||||| ||
Sbjct: 302 gaagattgctgctttcgttcccaatgatggttgcctgaacttcatcgaggaaaatgacga 361
Query: 390 ggtgttgattgctggatttggtcgtaagggtcatgctgtgggagacattcctggtgtcag 449
|||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||| |
Sbjct: 362 ggtgttgattgctggattcggtcgtaagggacatgctgtgggagatattcctggtgtccg 421
Query: 450 gttcaaggttgttaaggtgtctggtgtgtcgctgcttgcactcttcaaggagaagaagga 509
||||||||| || ||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 422 gttcaaggtcgtcaaggtgtctggtgtgtctctgcttgccctcttcaaggagaagaagga 481
Query: 510 gaagccaaggtctta 524
||| || ||||||||
Sbjct: 482 gaaacccaggtctta 496
>gb|BM368947.2|BM368947 EBem07_SQ002_B19_R embryo, 28 DPA, no treatment, cv Optic, EBem07
Hordeum vulgare subsp. vulgare cDNA clone
EBem07_SQ002_B19 5', mRNA sequence
Length = 514
Score = 569 bits (287), Expect = e-161
Identities = 398/435 (91%)
Strand = Plus / Plus
Query: 90 cgccaccatggggaagacacgtggtatgggagctgggcgcaagctcaagacccaccgcag 149
||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22 cgccaacatgggtaagacacgtggtatgggagctgggcgcaagctcaagacccaccgcag 81
Query: 150 gaaccagaggtgggctgacaaagcatacaagaagagccacttgggcaatgagtggaaaaa 209
||||||||||||||| ||||| ||||||||||||||||||||||| || |||||||| ||
Sbjct: 82 gaaccagaggtgggcagacaaggcatacaagaagagccacttgggtaacgagtggaagaa 141
Query: 210 accttttgctggatcatctcacgccaagggcatcgttctggagaagattggtattgaggc 269
|| || ||||| |||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 142 gcccttcgctgggtcatctcacgccaagggcattgttttggagaagattggtattgaggc 201
Query: 270 caagcagccaaattcggccatccgtaagtgtgcccgtgttcagctggtgaagaatggaaa 329
||||||||| || || ||||||||||||||||| ||||| ||||| ||||||||||||||
Sbjct: 202 caagcagcctaactctgccatccgtaagtgtgctcgtgtccagcttgtgaagaatggaaa 261
Query: 330 gaagattgctgcctttgtgccgaatgatggttgcctaaactacatcgaggagaatgatga 389
|||||||||||| || || || |||||||||||||| |||| ||||||||| ||||| ||
Sbjct: 262 gaagattgctgctttcgttcccaatgatggttgcctgaacttcatcgaggaaaatgacga 321
Query: 390 ggtgttgattgctggatttggtcgtaagggtcatgctgtgggagacattcctggtgtcag 449
|||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||| |
Sbjct: 322 ggtgttgattgctggattcggtcgtaagggacatgctgtgggagatattcctggtgtccg 381
Query: 450 gttcaaggttgttaaggtgtctggtgtgtcgctgcttgcactcttcaaggagaagaagga 509
||||||||| || ||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 382 gttcaaggtcgtcaaggtgtctggtgtgtctctgcttgccctcttcaaggagaagaagga 441
Query: 510 gaagccaaggtctta 524
||| || ||||||||
Sbjct: 442 gaaacccaggtctta 456
>gb|CV057843.1|CV057843 BNEL31d9 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL31d9 5' similar to 40S ribosomal
protein S23, mRNA sequence
Length = 645
Score = 569 bits (287), Expect = e-161
Identities = 403/442 (91%)
Strand = Plus / Plus
Query: 86 cctccgccaccatggggaagacacgtggtatgggagctgggcgcaagctcaagacccacc 145
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cctccgccatcatggggaagacacgtggtatgggagctgggcgcaagctcaagacccacc 120
Query: 146 gcaggaaccagaggtgggctgacaaagcatacaagaagagccacttgggcaatgagtgga 205
|||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 121 gcaggaaccagaggtgggctgataaggcatacaagaagagccacttgggcaatgagtgga 180
Query: 206 aaaaaccttttgctggatcatctcacgccaagggcatcgttctggagaagattggtattg 265
| ||||| ||||||||||| ||||| ||||||||||| || ||||||||||||||||||
Sbjct: 181 agaaaccctttgctggatcgtctcatgccaagggcattgtcttggagaagattggtattg 240
Query: 266 aggccaagcagccaaattcggccatccgtaagtgtgcccgtgttcagctggtgaagaatg 325
||||||||||||| || || ||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 241 aggccaagcagcctaactctgccatccgtaagtgtgctcgtgtccagctggtgaagaatg 300
Query: 326 gaaagaagattgctgcctttgtgccgaatgatggttgcctaaactacatcgaggagaatg 385
| |||||||| |||||||||||||| |||||||||||||| |||| ||||||||| || |
Sbjct: 301 ggaagaagatcgctgcctttgtgcctaatgatggttgcctgaacttcatcgaggaaaacg 360
Query: 386 atgaggtgttgattgctggatttggtcgtaagggtcatgctgtgggagacattcctggtg 445
| |||||| |||||||||| ||||||||||||||||| || ||||| || || |||||||
Sbjct: 361 acgaggtgctgattgctgggtttggtcgtaagggtcacgccgtgggtgatatccctggtg 420
Query: 446 tcaggttcaaggttgttaaggtgtctggtgtgtcgctgcttgcactcttcaaggagaaga 505
|||||||||||||||| ||||| ||||||||||| ||||| || ||||| | |||||||
Sbjct: 421 tcaggttcaaggttgtcaaggtatctggtgtgtccctgctggctctcttncaagagaaga 480
Query: 506 aggagaagccaaggtcttagat 527
|||||||||| |||||||||||
Sbjct: 481 aggagaagcccaggtcttagat 502
>gb|BM096567.2|BM096567 EBma05_SQ001_L23_R maternal, 12 DPA, no treatment, cv Optic, EBma05
Hordeum vulgare subsp. vulgare cDNA clone
EBma05_SQ001_L23 5', mRNA sequence
Length = 495
Score = 567 bits (286), Expect = e-160
Identities = 397/434 (91%)
Strand = Plus / Plus
Query: 90 cgccaccatggggaagacacgtggtatgggagctgggcgcaagctcaagacccaccgcag 149
||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 cgccaacatgggtaagacacgtggtatgggagctgggcgcaagctcaagacccaccgcag 121
Query: 150 gaaccagaggtgggctgacaaagcatacaagaagagccacttgggcaatgagtggaaaaa 209
||||||||||||||| ||||| ||||||||||||||||||||||| || |||||||| ||
Sbjct: 122 gaaccagaggtgggcagacaaggcatacaagaagagccacttgggtaacgagtggaagaa 181
Query: 210 accttttgctggatcatctcacgccaagggcatcgttctggagaagattggtattgaggc 269
|| || ||||| |||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 182 gcccttcgctgggtcatctcacgccaagggcattgttttggagaagattggtattgaggc 241
Query: 270 caagcagccaaattcggccatccgtaagtgtgcccgtgttcagctggtgaagaatggaaa 329
||||||||| || || ||||||||||||||||| ||||| ||||| ||||||||||||||
Sbjct: 242 caagcagcctaactctgccatccgtaagtgtgctcgtgtccagcttgtgaagaatggaaa 301
Query: 330 gaagattgctgcctttgtgccgaatgatggttgcctaaactacatcgaggagaatgatga 389
|||||||||||| || || || |||||||||||||| |||| ||||||||| ||||| ||
Sbjct: 302 gaagattgctgctttcgttcccaatgatggttgcctgaacttcatcgaggaaaatgacga 361
Query: 390 ggtgttgattgctggatttggtcgtaagggtcatgctgtgggagacattcctggtgtcag 449
|||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||| |
Sbjct: 362 ggtgttgattgctggattcggtcgtaagggacatgctgtgggagatattcctggtgtccg 421
Query: 450 gttcaaggttgttaaggtgtctggtgtgtcgctgcttgcactcttcaaggagaagaagga 509
||||||||| || ||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 422 gttcaaggtcgtcaaggtgtctggtgtgtctctgcttgccctcttcaaggagaagaagga 481
Query: 510 gaagccaaggtctt 523
||| || |||||||
Sbjct: 482 gaaacccaggtctt 495
>gb|BF629950.2|BF629950 HVSMEb0007H03f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0007H03f, mRNA sequence
Length = 501
Score = 561 bits (283), Expect = e-158
Identities = 388/423 (91%)
Strand = Plus / Plus
Query: 90 cgccaccatggggaagacacgtggtatgggagctgggcgcaagctcaagacccaccgcag 149
||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 cgccaacatgggtaagacacgtggtatgggagctgggcgcaagctcaagacccaccgcag 131
Query: 150 gaaccagaggtgggctgacaaagcatacaagaagagccacttgggcaatgagtggaaaaa 209
||||||||||||||| ||||| ||||||||||||||||||||||| || |||||||| ||
Sbjct: 132 gaaccagaggtgggcagacaaggcatacaagaagagccacttgggtaacgagtggaagaa 191
Query: 210 accttttgctggatcatctcacgccaagggcatcgttctggagaagattggtattgaggc 269
|| || ||||| |||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 192 gcccttcgctgggtcatctcacgccaagggcattgttttggagaagattggtattgaggc 251
Query: 270 caagcagccaaattcggccatccgtaagtgtgcccgtgttcagctggtgaagaatggaaa 329
||||||||| || || ||||||||||||||||| ||||| ||||| ||||||||||||||
Sbjct: 252 caagcagcctaactctgccatccgtaagtgtgctcgtgtccagcttgtgaagaatggaaa 311
Query: 330 gaagattgctgcctttgtgccgaatgatggttgcctaaactacatcgaggagaatgatga 389
|||||||||||| || || || |||||||||||||| |||| ||||||||| ||||| ||
Sbjct: 312 gaagattgctgctttcgttcccaatgatggttgcctgaacttcatcgaggaaaatgacga 371
Query: 390 ggtgttgattgctggatttggtcgtaagggtcatgctgtgggagacattcctggtgtcag 449
|||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||| |
Sbjct: 372 ggtgttgattgctggattcggtcgtaagggacatgctgtgggagatattcctggtgtccg 431
Query: 450 gttcaaggttgttaaggtgtctggtgtgtcgctgcttgcactcttcaaggagaagaagga 509
||||||||| || ||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 432 gttcaaggtcgtcaaggtgtctggtgtgtctctgcttgccctcttcaaggagaagaagga 491
Query: 510 gaa 512
|||
Sbjct: 492 gaa 494
>gb|BQ762368.1|BQ762368 EBro01_SQ005_J17_R root, 3 week, hydroponic grown, no treatment, cv
Optic, EBro01 Hordeum vulgare subsp. vulgare cDNA clone
EBro01_SQ005_J17 5', mRNA sequence
Length = 551
Score = 561 bits (283), Expect = e-158
Identities = 401/439 (91%), Gaps = 1/439 (0%)
Strand = Plus / Plus
Query: 90 cgccaccatggggaagacacgtggtatgggagctgggcgcaagctcaagacccaccgcag 149
||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81 cgccaacatgggtaagacacgtggtatgggagctgggcgcaagctcaagacccaccgcag 140
Query: 150 gaaccagaggtgggctgacaaagcatacaagaagagccacttgggcaatgagtggaaaaa 209
||||||||||||||| ||||| ||||||||||||||||||||||| || |||||||| ||
Sbjct: 141 gaaccagaggtgggcagacaaggcatacaagaagagccacttgggtaacgagtggaagaa 200
Query: 210 accttttgctggatcatctcacgccaagggcatcgttctggagaagattggtattgaggc 269
|| || ||||| |||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 201 gcccttcgctgggtcatctcacgccaagggcattgttttggagaagattggtattgaggc 260
Query: 270 caagcagccaaattcggccatccgtaagtgtgcccgtgttcagctggtgaagaatggaaa 329
||||||||| || || ||||||||||||||||| ||||| ||||| ||||||||||||||
Sbjct: 261 caagcagcctaactctgccatccgtaagtgtgctcgtgtccagcttgtgaagaatggaaa 320
Query: 330 gaagattgctgcctttgtgccgaatgatggttgcctaaactacatcgaggagaatgatga 389
|||||||||||| || || || |||||||||||||| |||| ||||||||| ||||| ||
Sbjct: 321 gaagattgctgctttcgttcccaatgatggttgcctgaacttcatcgaggaaaatgacga 380
Query: 390 ggtgttgattgctggatttggtcgtaagggtcatgctgtgggagacattcctggtgtcag 449
|||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||| |
Sbjct: 381 ggtgttgattgctggattcggtcgtaagggacatgctgtgggagatattcctggtgtccg 440
Query: 450 gttcaaggttgttaaggt-gtctggtgtgtcgctgcttgcactcttcaaggagaagaagg 508
||||||||| || ||||| |||||||||||| |||||||| |||||||||||||||||||
Sbjct: 441 gttcaaggtcgtcaaggtggtctggtgtgtctctgcttgccctcttcaaggagaagaagg 500
Query: 509 agaagccaaggtcttagat 527
|||| || |||||||||||
Sbjct: 501 agaaacccaggtcttagat 519
>gb|CV060606.1|CV060606 BNEL5A9 Barley EST endosperm library Hordeum vulgare subsp. vulgare
cDNA clone BNEL5A9 5' similar to 40S ribosomal protein
S23, mRNA sequence
Length = 636
Score = 561 bits (283), Expect = e-158
Identities = 403/442 (91%), Gaps = 1/442 (0%)
Strand = Plus / Plus
Query: 86 cctccgccaccatggggaagacacgtggtatgggagctgggcgcaagctcaagacccacc 145
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56 cctccgccatcatggggaagacacgtggtatgggagctgggcgcaagctcaagacccacc 115
Query: 146 gcaggaaccagaggtgggctgacaaagcatacaagaagagccacttgggcaatgagtgga 205
|||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 116 gcaggaaccagaggtgggctgataaggcatacaagaagagccacttgggcaatgagtgga 175
Query: 206 aaaaaccttttgctggatcatctcacgccaagggcatcgttctggagaagattggtattg 265
| ||||| ||||||||||| ||||| ||||||||||| || ||||||||||||||||||
Sbjct: 176 agaaaccctttgctggatcgtctcatgccaagggcattgtcttggagaagattggtattg 235
Query: 266 aggccaagcagccaaattcggccatccgtaagtgtgcccgtgttcagctggtgaagaatg 325
||||||||||||| || || ||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 236 aggccaagcagcctaactctgccatccgtaagtgtgctcgtgtccagctggtgaagaatg 295
Query: 326 gaaagaagattgctgcctttgtgccgaatgatggttgcctaaactacatcgaggagaatg 385
| |||||||| |||||||||||||| |||||||||||||| |||| ||||||||| || |
Sbjct: 296 ggaagaagatcgctgcctttgtgcctaatgatggttgcctgaacttcatcgaggaaaacg 355
Query: 386 atgaggtgttgattgctggatttggtcgtaagggtcatgctgtgggagacattcctggtg 445
| |||||| |||||||||| || ||||||| |||||| || ||||| || || |||||||
Sbjct: 356 acgaggtgctgattgctgg-ttnggtcgtaggggtcacgccgtgggtgatatccctggtg 414
Query: 446 tcaggttcaaggttgttaaggtgtctggtgtgtcgctgcttgcactcttcaaggagaaga 505
|||||||||||||||| ||||| ||||||||||| ||||| || |||||||| |||||||
Sbjct: 415 tcaggttcaaggttgtcaaggtatctggtgtgtccctgctggctctcttcaaagagaaga 474
Query: 506 aggagaagccaaggtcttagat 527
|||||||||| |||||||||||
Sbjct: 475 aggagaagcccaggtcttagat 496
>gb|AV916081.1|AV916081 AV916081 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags1g03 5', mRNA sequence
Length = 621
Score = 557 bits (281), Expect = e-157
Identities = 403/443 (90%), Gaps = 1/443 (0%)
Strand = Plus / Plus
Query: 86 cctccgccaccatggggaagacacgtggtatgggagctgggcgcaagctcaag-acccac 144
||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 31 cctccgccatcatggggaagacacgtggtatgggagctgggcgcaagctcaagcacccac 90
Query: 145 cgcaggaaccagaggtgggctgacaaagcatacaagaagagccacttgggcaatgagtgg 204
||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 91 cgcaggaaccagaggtgggctgataaggcatacaagaagagccacttgggcaatgagtgg 150
Query: 205 aaaaaaccttttgctggatcatctcacgccaagggcatcgttctggagaagattggtatt 264
|| ||||| ||||||||||| ||||||||||||||||| || || ||||||||||||||
Sbjct: 151 aagaaaccctttgctggatcgtctcacgccaagggcattgtcttgnagaagattggtatt 210
Query: 265 gaggccaagcagccaaattcggccatccgtaagtgtgcccgtgttcagctggtgaagaat 324
|||||||||||||| || || ||||| ||||||||||| ||||| ||||||||||||||
Sbjct: 211 gaggccaagcagcctaactctgccatncgtaagtgtgctcgtgtccagctggtgaagaac 270
Query: 325 ggaaagaagattgctgcctttgtgccgaatgatggttgcctaaactacatcgaggagaat 384
|| ||||||||||||||||||||||| || ||||||||||| |||| ||||||||| ||
Sbjct: 271 gggaagaagattgctgcctttgtgcctaacgatggttgcctgaacttcatcgaggaaaac 330
Query: 385 gatgaggtgttgattgctggatttggtcgtaagggtcatgctgtgggagacattcctggt 444
|| |||||| |||||||||| ||||||||||||||||| || ||||| || || ||||||
Sbjct: 331 gacgaggtgctgattgctgggtttggtcgtaagggtcacgccgtgggtgatatccctggt 390
Query: 445 gtcaggttcaaggttgttaaggtgtctggtgtgtcgctgcttgcactcttcaaggagaag 504
||||||||||||||||| ||||| ||||||||||| ||||| || |||||||| ||||||
Sbjct: 391 gtcaggttcaaggttgtcaaggtatctggtgtgtccctgctggctctcttcaaagagaag 450
Query: 505 aaggagaagccaaggtcttagat 527
||||||||||| |||||||||||
Sbjct: 451 aaggagaagcccaggtcttagat 473
>gb|AJ460735.1|AJ460735 AJ460735 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200078B03F1, mRNA sequence
Length = 420
Score = 557 bits (281), Expect = e-157
Identities = 383/417 (91%)
Strand = Plus / Plus
Query: 96 catggggaagacacgtggtatgggagctgggcgcaagctcaagacccaccgcaggaacca 155
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 catgggtaagacacgtggtatgggagctgggcgcaagctcaagacccaccgcaggaacca 63
Query: 156 gaggtgggctgacaaagcatacaagaagagccacttgggcaatgagtggaaaaaaccttt 215
||||||||| ||||| ||||||||||||||||||||||| || |||||||| || || ||
Sbjct: 64 gaggtgggcagacaaggcatacaagaagagccacttgggtaacgagtggaagaagccctt 123
Query: 216 tgctggatcatctcacgccaagggcatcgttctggagaagattggtattgaggccaagca 275
||||| |||||||||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 124 cgctgggtcatctcacgccaagggcattgttttggagaagattggtattgaggccaagca 183
Query: 276 gccaaattcggccatccgtaagtgtgcccgtgttcagctggtgaagaatggaaagaagat 335
||| || || ||||||||||||||||| ||||| ||||| ||||||||||||||||||||
Sbjct: 184 gcctaactctgccatccgtaagtgtgctcgtgtccagcttgtgaagaatggaaagaagat 243
Query: 336 tgctgcctttgtgccgaatgatggttgcctaaactacatcgaggagaatgatgaggtgtt 395
|||||| || || || |||||||||||||| |||| ||||||||| ||||| ||||||||
Sbjct: 244 tgctgctttcgttcccaatgatggttgcctgaacttcatcgaggaaaatgacgaggtgtt 303
Query: 396 gattgctggatttggtcgtaagggtcatgctgtgggagacattcctggtgtcaggttcaa 455
|||||||||||| ||||||||||| |||||||||||||| |||||||||||| |||||||
Sbjct: 304 gattgctggattcggtcgtaagggacatgctgtgggagatattcctggtgtccggttcaa 363
Query: 456 ggttgttaaggtgtctggtgtgtcgctgcttgcactcttcaaggagaagaaggagaa 512
||| || ||||||||||||||||| |||||||| |||||||||||||||||||||||
Sbjct: 364 ggtcgtcaaggtgtctggtgtgtctctgcttgccctcttcaaggagaagaaggagaa 420
>gb|BQ761848.1|BQ761848 EBpi01_SQ005_F06_R pistil, 1 DPA, no treatment, cv Optic, EBpi01
Hordeum vulgare subsp. vulgare cDNA clone
EBpi01_SQ005_F06 5', mRNA sequence
Length = 581
Score = 555 bits (280), Expect = e-157
Identities = 405/444 (91%), Gaps = 2/444 (0%)
Strand = Plus / Plus
Query: 86 cctccgccaccatggggaagacacgtggtatgggagctgggcgcaagctcaagacccacc 145
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44 cctccgccatcatggggaagacacgtggtatgggagctgggcgcaagctcaagacccacc 103
Query: 146 gcaggaaccagaggtgggctgacaaagcatacaagaagagccacttgggcaatgagtgga 205
|||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 104 gcaggaaccagaggtgggctgataaggcatacaagaagagccacttgggcaatgagtgga 163
Query: 206 aaaaaccttttgctggatcatctcacgccaagggcatcgttctggagaagattggtattg 265
| ||||| ||||||||||| ||||||||||||||||| || ||||||||||||||||||
Sbjct: 164 agaaaccctttgctggatcgtctcacgccaagggcattgtcttggagaagattggtattg 223
Query: 266 aggccaagcagccaaattcggccatccgtaagtgtgcccgtgttcagctggtgaagaatg 325
||||||||||||| || || ||||||||||||||||| ||||| |||||||||||||| |
Sbjct: 224 aggccaagcagcctaactctgccatccgtaagtgtgctcgtgtccagctggtgaagaacg 283
Query: 326 gaaagaagattgctgcctttgtgccgaatgatggttgcctaaactacatcgaggagaatg 385
| ||||||||||||||||||||||| || ||||||||||| |||| ||||||||| || |
Sbjct: 284 ggaagaagattgctgcctttgtgcctaacgatggttgcctgaacttcatcgaggaaaacg 343
Query: 386 atgaggtgttgatt-gctggatttggtcgtaagggtcatgctgtgggagacattcctggt 444
| |||||| ||||| ||||| ||||||||||||||||| || ||||| || || ||||||
Sbjct: 344 acgaggtgctgattggctgggtttggtcgtaagggtcacgccgtgggtgatatccctggt 403
Query: 445 gtcaggttcaaggttgttaa-ggtgtctggtgtgtcgctgcttgcactcttcaaggagaa 503
||||||||||||||||| || ||| ||||||||||| ||||| || |||||||| |||||
Sbjct: 404 gtcaggttcaaggttgtcaagggtatctggtgtgtccctgctggctctcttcaaagagaa 463
Query: 504 gaaggagaagccaaggtcttagat 527
|||||||||||| |||||||||||
Sbjct: 464 gaaggagaagcccaggtcttagat 487
>gb|BI959645.1|BI959645 HVSMEn0020J03f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0020J03f, mRNA sequence
Length = 637
Score = 553 bits (279), Expect = e-156
Identities = 396/435 (91%)
Strand = Plus / Plus
Query: 90 cgccaccatggggaagacacgtggtatgggagctgggcgcaagctcaagacccaccgcag 149
||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 cgccaacatgggtaagacacgtggtatgggagctgggcgcaagctcaagacccaccgcag 132
Query: 150 gaaccagaggtgggctgacaaagcatacaagaagagccacttgggcaatgagtggaaaaa 209
||||||||||||||| ||||| ||||||||||||||||||||||| | |||||||| ||
Sbjct: 133 gaaccagaggtgggcagacaaggcatacaagaagagccacttgggggacgagtggaagaa 192
Query: 210 accttttgctggatcatctcacgccaagggcatcgttctggagaagattggtattgaggc 269
|| || ||||| |||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 193 gcccttcgctgggtcatctcacgccaagggcattgttttggagaagattggtattgaggc 252
Query: 270 caagcagccaaattcggccatccgtaagtgtgcccgtgttcagctggtgaagaatggaaa 329
||||||||| || || ||||||||||||||||| ||||| ||||| ||||||||||||||
Sbjct: 253 caagcagcctaactctgccatccgtaagtgtgctcgtgtccagcttgtgaagaatggaaa 312
Query: 330 gaagattgctgcctttgtgccgaatgatggttgcctaaactacatcgaggagaatgatga 389
|||||||||||| || || || |||||||||||||| |||| ||||||||| ||||| ||
Sbjct: 313 gaagattgctgctttcgttcccaatgatggttgcctgaacttcatcgaggaaaatgacga 372
Query: 390 ggtgttgattgctggatttggtcgtaagggtcatgctgtgggagacattcctggtgtcag 449
|||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||| |
Sbjct: 373 ggtgttgattgctggattcggtcgtaagggacatgctgtgggagatattcctggtgtccg 432
Query: 450 gttcaaggttgttaaggtgtctggtgtgtcgctgcttgcactcttcaaggagaagaagga 509
|||||||| || ||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 433 gttcaagggcgtcaaggtgtctggtgtgtctctgcttgccctcttcaaggagaagaagga 492
Query: 510 gaagccaaggtctta 524
||| || ||||||||
Sbjct: 493 gaaacccaggtctta 507
>gb|AL508127.1|AL508127 AL508127 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY07N18V 5',
mRNA sequence
Length = 684
Score = 551 bits (278), Expect = e-155
Identities = 398/438 (90%)
Strand = Plus / Plus
Query: 90 cgccaccatggggaagacacgtggtatgggagctgggcgcaagctcaagacccaccgcag 149
||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 cgccaacatgggtaagacacgtggtatgggagctgggcgcaagctcaagacccaccgcag 131
Query: 150 gaaccagaggtgggctgacaaagcatacaagaagagccacttgggcaatgagtggaaaaa 209
||||||||||||||| ||||| ||||||||||||||||||||||| || |||||||| ||
Sbjct: 132 gaaccagaggtgggcagacaaggcatacaagaagagccacttgggtaacgagtggaagaa 191
Query: 210 accttttgctggatcatctcacgccaagggcatcgttctggagaagattggtattgaggc 269
|| || || || |||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 192 gcccttcgccgggtcatctcacgccaagggcattgttttggagaagattggtattgaggc 251
Query: 270 caagcagccaaattcggccatccgtaagtgtgcccgtgttcagctggtgaagaatggaaa 329
||||||||| || || ||||||||||||||||| ||||| ||||| ||||||||||||||
Sbjct: 252 caagcagcctaactctgccatccgtaagtgtgctcgtgtccagcttgtgaagaatggaaa 311
Query: 330 gaagattgctgcctttgtgccgaatgatggttgcctaaactacatcgaggagaatgatga 389
|||||||||||| || || || |||||||||||||| |||| ||| ||||| ||||| ||
Sbjct: 312 gaagattgctgctttcgttcccaatgatggttgcctgaacttcattgaggaaaatgacga 371
Query: 390 ggtgttgattgctggatttggtcgtaagggtcatgctgtgggagacattcctggtgtcag 449
|||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||| |
Sbjct: 372 ggtgttgattgctggattcggtcgtaagggacatgctgtgggagatattcctggtgtccg 431
Query: 450 gttcaaggttgttaaggtgtctggtgtgtcgctgcttgcactcttcaaggagaagaagga 509
||||||||| || ||||||||||||||||| ||||| || ||||||||||||||||||||
Sbjct: 432 gttcaaggtcgtcaaggtgtctggtgtgtctctgctcgccctcttcaaggagaagaagga 491
Query: 510 gaagccaaggtcttagat 527
||| || |||||||||||
Sbjct: 492 gaaacccaggtcttagat 509
>gb|BQ460148.1|BQ460148 HA07B12r HA Hordeum vulgare subsp. vulgare cDNA clone HA07B12
5-PRIME, mRNA sequence
Length = 560
Score = 551 bits (278), Expect = e-155
Identities = 398/438 (90%)
Strand = Plus / Plus
Query: 90 cgccaccatggggaagacacgtggtatgggagctgggcgcaagctcaagacccaccgcag 149
||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87 cgccaacatgggtaagacacgtggtatgggagctgggcgcaagctcaagacccaccgcag 146
Query: 150 gaaccagaggtgggctgacaaagcatacaagaagagccacttgggcaatgagtggaaaaa 209
||||||||||||||| ||||| ||||||||||||||||||||||| || |||||||| ||
Sbjct: 147 gaaccagaggtgggcagacaaggcatacaagaagagccacttgggtaacgagtggaagaa 206
Query: 210 accttttgctggatcatctcacgccaagggcatcgttctggagaagattggtattgaggc 269
|| || || || |||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 207 gcccttcgccgggtcatctcacgccaagggcattgttttggagaagattggtattgaggc 266
Query: 270 caagcagccaaattcggccatccgtaagtgtgcccgtgttcagctggtgaagaatggaaa 329
||||||||| || || ||||||||||||||||| ||||| ||||| ||||||||||||||
Sbjct: 267 caagcagcctaactctgccatccgtaagtgtgctcgtgtccagcttgtgaagaatggaaa 326
Query: 330 gaagattgctgcctttgtgccgaatgatggttgcctaaactacatcgaggagaatgatga 389
|||||||||||| || || || |||||||||||||| |||| ||| ||||| ||||| ||
Sbjct: 327 gaagattgctgctttcgttcccaatgatggttgcctgaacttcattgaggaaaatgacga 386
Query: 390 ggtgttgattgctggatttggtcgtaagggtcatgctgtgggagacattcctggtgtcag 449
|||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||| |
Sbjct: 387 ggtgttgattgctggattcggtcgtaagggacatgctgtgggagatattcctggtgtccg 446
Query: 450 gttcaaggttgttaaggtgtctggtgtgtcgctgcttgcactcttcaaggagaagaagga 509
||||||||| || ||||||||||||||||| ||||| || ||||||||||||||||||||
Sbjct: 447 gttcaaggtcgtcaaggtgtctggtgtgtctctgctcgccctcttcaaggagaagaagga 506
Query: 510 gaagccaaggtcttagat 527
||| || |||||||||||
Sbjct: 507 gaaacccaggtcttagat 524
>gb|BQ464412.1|BQ464412 HF02D08r HF Hordeum vulgare subsp. vulgare cDNA clone HF02D08
5-PRIME, mRNA sequence
Length = 566
Score = 551 bits (278), Expect = e-155
Identities = 398/438 (90%)
Strand = Plus / Plus
Query: 90 cgccaccatggggaagacacgtggtatgggagctgggcgcaagctcaagacccaccgcag 149
||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94 cgccaacatgggtaagacacgtggtatgggagctgggcgcaagctcaagacccaccgcag 153
Query: 150 gaaccagaggtgggctgacaaagcatacaagaagagccacttgggcaatgagtggaaaaa 209
||||||||||||||| ||||| ||||||||||||||||||||||| || |||||||| ||
Sbjct: 154 gaaccagaggtgggcagacaaggcatacaagaagagccacttgggtaacgagtggaagaa 213
Query: 210 accttttgctggatcatctcacgccaagggcatcgttctggagaagattggtattgaggc 269
|| || || || |||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 214 gcccttcgccgggtcatctcacgccaagggcattgttttggagaagattggtattgaggc 273
Query: 270 caagcagccaaattcggccatccgtaagtgtgcccgtgttcagctggtgaagaatggaaa 329
||||||||| || || ||||||||||||||||| ||||| ||||| ||||||||||||||
Sbjct: 274 caagcagcctaactctgccatccgtaagtgtgctcgtgtccagcttgtgaagaatggaaa 333
Query: 330 gaagattgctgcctttgtgccgaatgatggttgcctaaactacatcgaggagaatgatga 389
|||||||||||| || || || |||||||||||||| |||| ||| ||||| ||||| ||
Sbjct: 334 gaagattgctgctttcgttcccaatgatggttgcctgaacttcattgaggaaaatgacga 393
Query: 390 ggtgttgattgctggatttggtcgtaagggtcatgctgtgggagacattcctggtgtcag 449
|||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||| |
Sbjct: 394 ggtgttgattgctggattcggtcgtaagggacatgctgtgggagatattcctggtgtccg 453
Query: 450 gttcaaggttgttaaggtgtctggtgtgtcgctgcttgcactcttcaaggagaagaagga 509
||||||||| || ||||||||||||||||| ||||| || ||||||||||||||||||||
Sbjct: 454 gttcaaggtcgtcaaggtgtctggtgtgtctctgctcgccctcttcaaggagaagaagga 513
Query: 510 gaagccaaggtcttagat 527
||| || |||||||||||
Sbjct: 514 gaaacccaggtcttagat 531
>gb|BQ469009.1|BQ469009 HM03B14r HM Hordeum vulgare subsp. vulgare cDNA clone HM03B14
5-PRIME, mRNA sequence
Length = 586
Score = 551 bits (278), Expect = e-155
Identities = 398/438 (90%)
Strand = Plus / Plus
Query: 90 cgccaccatggggaagacacgtggtatgggagctgggcgcaagctcaagacccaccgcag 149
||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 cgccaacatgggtaagacacgtggtatgggagctgggcgcaagctcaagacccaccgcag 128
Query: 150 gaaccagaggtgggctgacaaagcatacaagaagagccacttgggcaatgagtggaaaaa 209
||||||||||||||| ||||| ||||||||||||||||||||||| || |||||||| ||
Sbjct: 129 gaaccagaggtgggcagacaaggcatacaagaagagccacttgggtaacgagtggaagaa 188
Query: 210 accttttgctggatcatctcacgccaagggcatcgttctggagaagattggtattgaggc 269
|| || || || |||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 189 gcccttcgccgggtcatctcacgccaagggcattgttttggagaagattggtattgaggc 248
Query: 270 caagcagccaaattcggccatccgtaagtgtgcccgtgttcagctggtgaagaatggaaa 329
||||||||| || || ||||||||||||||||| ||||| ||||| ||||||||||||||
Sbjct: 249 caagcagcctaactctgccatccgtaagtgtgctcgtgtccagcttgtgaagaatggaaa 308
Query: 330 gaagattgctgcctttgtgccgaatgatggttgcctaaactacatcgaggagaatgatga 389
|||||||||||| || || || |||||||||||||| |||| ||| ||||| ||||| ||
Sbjct: 309 gaagattgctgctttcgttcccaatgatggttgcctgaacttcattgaggaaaatgacga 368
Query: 390 ggtgttgattgctggatttggtcgtaagggtcatgctgtgggagacattcctggtgtcag 449
|||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||| |
Sbjct: 369 ggtgttgattgctggattcggtcgtaagggacatgctgtgggagatattcctggtgtccg 428
Query: 450 gttcaaggttgttaaggtgtctggtgtgtcgctgcttgcactcttcaaggagaagaagga 509
||||||||| || ||||||||||||||||| ||||| || ||||||||||||||||||||
Sbjct: 429 gttcaaggtcgtcaaggtgtctggtgtgtctctgctcgccctcttcaaggagaagaagga 488
Query: 510 gaagccaaggtcttagat 527
||| || |||||||||||
Sbjct: 489 gaaacccaggtcttagat 506
>gb|BU976563.1|BU976563 HA03O16r HA Hordeum vulgare subsp. vulgare cDNA clone HA03O16
5-PRIME, mRNA sequence
Length = 556
Score = 551 bits (278), Expect = e-155
Identities = 398/438 (90%)
Strand = Plus / Plus
Query: 90 cgccaccatggggaagacacgtggtatgggagctgggcgcaagctcaagacccaccgcag 149
||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84 cgccaacatgggtaagacacgtggtatgggagctgggcgcaagctcaagacccaccgcag 143
Query: 150 gaaccagaggtgggctgacaaagcatacaagaagagccacttgggcaatgagtggaaaaa 209
||||||||||||||| ||||| ||||||||||||||||||||||| || |||||||| ||
Sbjct: 144 gaaccagaggtgggcagacaaggcatacaagaagagccacttgggtaacgagtggaagaa 203
Query: 210 accttttgctggatcatctcacgccaagggcatcgttctggagaagattggtattgaggc 269
|| || || || |||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 204 gcccttcgccgggtcatctcacgccaagggcattgttttggagaagattggtattgaggc 263
Query: 270 caagcagccaaattcggccatccgtaagtgtgcccgtgttcagctggtgaagaatggaaa 329
||||||||| || || ||||||||||||||||| ||||| ||||| ||||||||||||||
Sbjct: 264 caagcagcctaactctgccatccgtaagtgtgctcgtgtccagcttgtgaagaatggaaa 323
Query: 330 gaagattgctgcctttgtgccgaatgatggttgcctaaactacatcgaggagaatgatga 389
|||||||||||| || || || |||||||||||||| |||| ||| ||||| ||||| ||
Sbjct: 324 gaagattgctgctttcgttcccaatgatggttgcctgaacttcattgaggaaaatgacga 383
Query: 390 ggtgttgattgctggatttggtcgtaagggtcatgctgtgggagacattcctggtgtcag 449
|||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||| |
Sbjct: 384 ggtgttgattgctggattcggtcgtaagggacatgctgtgggagatattcctggtgtccg 443
Query: 450 gttcaaggttgttaaggtgtctggtgtgtcgctgcttgcactcttcaaggagaagaagga 509
||||||||| || ||||||||||||||||| ||||| || ||||||||||||||||||||
Sbjct: 444 gttcaaggtcgtcaaggtgtctggtgtgtctctgctcgccctcttcaaggagaagaagga 503
Query: 510 gaagccaaggtcttagat 527
||| || |||||||||||
Sbjct: 504 gaaacccaggtcttagat 521
>gb|BU978209.1|BU978209 HA12M04r HA Hordeum vulgare subsp. vulgare cDNA clone HA12M04
5-PRIME, mRNA sequence
Length = 550
Score = 551 bits (278), Expect = e-155
Identities = 398/438 (90%)
Strand = Plus / Plus
Query: 90 cgccaccatggggaagacacgtggtatgggagctgggcgcaagctcaagacccaccgcag 149
||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78 cgccaacatgggtaagacacgtggtatgggagctgggcgcaagctcaagacccaccgcag 137
Query: 150 gaaccagaggtgggctgacaaagcatacaagaagagccacttgggcaatgagtggaaaaa 209
||||||||||||||| ||||| ||||||||||||||||||||||| || |||||||| ||
Sbjct: 138 gaaccagaggtgggcagacaaggcatacaagaagagccacttgggtaacgagtggaagaa 197
Query: 210 accttttgctggatcatctcacgccaagggcatcgttctggagaagattggtattgaggc 269
|| || || || |||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 198 gcccttcgccgggtcatctcacgccaagggcattgttttggagaagattggtattgaggc 257
Query: 270 caagcagccaaattcggccatccgtaagtgtgcccgtgttcagctggtgaagaatggaaa 329
||||||||| || || ||||||||||||||||| ||||| ||||| ||||||||||||||
Sbjct: 258 caagcagcctaactctgccatccgtaagtgtgctcgtgtccagcttgtgaagaatggaaa 317
Query: 330 gaagattgctgcctttgtgccgaatgatggttgcctaaactacatcgaggagaatgatga 389
|||||||||||| || || || |||||||||||||| |||| ||| ||||| ||||| ||
Sbjct: 318 gaagattgctgctttcgttcccaatgatggttgcctgaacttcattgaggaaaatgacga 377
Query: 390 ggtgttgattgctggatttggtcgtaagggtcatgctgtgggagacattcctggtgtcag 449
|||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||| |
Sbjct: 378 ggtgttgattgctggattcggtcgtaagggacatgctgtgggagatattcctggtgtccg 437
Query: 450 gttcaaggttgttaaggtgtctggtgtgtcgctgcttgcactcttcaaggagaagaagga 509
||||||||| || ||||||||||||||||| ||||| || ||||||||||||||||||||
Sbjct: 438 gttcaaggtcgtcaaggtgtctggtgtgtctctgctcgccctcttcaaggagaagaagga 497
Query: 510 gaagccaaggtcttagat 527
||| || |||||||||||
Sbjct: 498 gaaacccaggtcttagat 515
>gb|BU978517.1|BU978517 HA13H11r HA Hordeum vulgare subsp. vulgare cDNA clone HA13H11
5-PRIME, mRNA sequence
Length = 546
Score = 551 bits (278), Expect = e-155
Identities = 398/438 (90%)
Strand = Plus / Plus
Query: 90 cgccaccatggggaagacacgtggtatgggagctgggcgcaagctcaagacccaccgcag 149
||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74 cgccaacatgggtaagacacgtggtatgggagctgggcgcaagctcaagacccaccgcag 133
Query: 150 gaaccagaggtgggctgacaaagcatacaagaagagccacttgggcaatgagtggaaaaa 209
||||||||||||||| ||||| ||||||||||||||||||||||| || |||||||| ||
Sbjct: 134 gaaccagaggtgggcagacaaggcatacaagaagagccacttgggtaacgagtggaagaa 193
Query: 210 accttttgctggatcatctcacgccaagggcatcgttctggagaagattggtattgaggc 269
|| || || || |||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 194 gcccttcgccgggtcatctcacgccaagggcattgttttggagaagattggtattgaggc 253
Query: 270 caagcagccaaattcggccatccgtaagtgtgcccgtgttcagctggtgaagaatggaaa 329
||||||||| || || ||||||||||||||||| ||||| ||||| ||||||||||||||
Sbjct: 254 caagcagcctaactctgccatccgtaagtgtgctcgtgtccagcttgtgaagaatggaaa 313
Query: 330 gaagattgctgcctttgtgccgaatgatggttgcctaaactacatcgaggagaatgatga 389
|||||||||||| || || || |||||||||||||| |||| ||| ||||| ||||| ||
Sbjct: 314 gaagattgctgctttcgttcccaatgatggttgcctgaacttcattgaggaaaatgacga 373
Query: 390 ggtgttgattgctggatttggtcgtaagggtcatgctgtgggagacattcctggtgtcag 449
|||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||| |
Sbjct: 374 ggtgttgattgctggattcggtcgtaagggacatgctgtgggagatattcctggtgtccg 433
Query: 450 gttcaaggttgttaaggtgtctggtgtgtcgctgcttgcactcttcaaggagaagaagga 509
||||||||| || ||||||||||||||||| ||||| || ||||||||||||||||||||
Sbjct: 434 gttcaaggtcgtcaaggtgtctggtgtgtctctgctcgccctcttcaaggagaagaagga 493
Query: 510 gaagccaaggtcttagat 527
||| || |||||||||||
Sbjct: 494 gaaacccaggtcttagat 511
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 94,811
Number of Sequences: 312970
Number of extensions: 94811
Number of successful extensions: 31135
Number of sequences better than 0.5: 247
Number of HSP's better than 0.5 without gapping: 247
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 30827
Number of HSP's gapped (non-prelim): 283
length of query: 708
length of database: 175,134,539
effective HSP length: 19
effective length of query: 689
effective length of database: 169,188,109
effective search space: 116570607101
effective search space used: 116570607101
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)