BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2441542.2.1
(3782 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BF624748.2|BF624748 HVSMEa0017K05f Hordeum vulgare seedl... 805 0.0
gb|BQ468579.1|BQ468579 HM01K12T HM Hordeum vulgare subsp. v... 714 0.0
gb|BG368813.1|BG368813 HVSMEi0020M13f Hordeum vulgare 20 DA... 710 0.0
gb|CK124710.1|CK124710 BES1824110c01 BES1824 Hordeum vulgar... 698 0.0
gb|CB882206.1|CB882206 HL01D01w HL Hordeum vulgare subsp. v... 648 0.0
gb|BI956967.1|BI956967 HVSMEn0006I08f Hordeum vulgare rachi... 646 0.0
gb|AL504419.1|AL504419 AL504419 Hordeum vulgare Barke roots... 644 0.0
gb|AV836682.1|AV836682 AV836682 K. Sato unpublished cDNA li... 636 e-180
gb|BF259426.2|BF259426 HVSMEf0019B07f Hordeum vulgare seedl... 626 e-177
gb|BQ471177.1|BQ471177 HV01F24T HV Hordeum vulgare subsp. v... 618 e-175
gb|BM816138.1|BM816138 HC109B12_T3.ab1 HC Hordeum vulgare s... 613 e-173
gb|AW982533.3|AW982533 HVSMEg0003I09f Hordeum vulgare pre-a... 599 e-169
gb|CB883651.1|CB883651 HQ02O03w HQ Hordeum vulgare subsp. v... 595 e-168
gb|BU995821.1|BU995821 HM11H13r HM Hordeum vulgare subsp. v... 593 e-167
gb|BU999035.1|BU999035 HI12P13r HI Hordeum vulgare subsp. v... 591 e-167
gb|CV061189.1|CV061189 BNEL65h6 Barley EST endosperm librar... 591 e-167
gb|CA009062.1|CA009062 HU13B03r HU Hordeum vulgare subsp. v... 587 e-165
gb|BF255020.3|BF255020 HVSMEf0005K21f Hordeum vulgare seedl... 575 e-162
gb|AV932043.1|AV932043 AV932043 K. Sato unpublished cDNA li... 573 e-161
gb|CA019265.1|CA019265 HV11G20r HV Hordeum vulgare subsp. v... 563 e-158
gb|BQ471393.1|BQ471393 HV02E21r HV Hordeum vulgare subsp. v... 539 e-151
gb|CA031458.1|CA031458 HX10A06r HX Hordeum vulgare subsp. v... 533 e-149
gb|BI951084.1|BI951084 HVSMEl0024F09f Hordeum vulgare spike... 507 e-142
gb|CA020225.1|CA020225 HV14L03r HV Hordeum vulgare subsp. v... 494 e-137
gb|CA019676.1|CA019676 HV12L21r HV Hordeum vulgare subsp. v... 486 e-135
gb|BE193304.2|BE193304 HVSMEh0080I07f Hordeum vulgare 5-45 ... 478 e-133
gb|BQ468619.1|BQ468619 HM01M13T HM Hordeum vulgare subsp. v... 472 e-131
gb|BM442929.2|BM442929 EBro02_SQ001_O08_R root, 3 week, hyd... 470 e-130
gb|CA012990.1|CA012990 HT07B01r HT Hordeum vulgare subsp. v... 466 e-129
gb|AV914933.1|AV914933 AV914933 K. Sato unpublished cDNA li... 464 e-128
gb|BF624752.2|BF624752 HVSMEa0017K09f Hordeum vulgare seedl... 458 e-127
gb|BQ463573.1|BQ463573 HI05L24r HI Hordeum vulgare subsp. v... 454 e-125
gb|BU986849.1|BU986849 HF13B10r HF Hordeum vulgare subsp. v... 442 e-122
gb|BG414971.1|BG414971 HVSMEk0004I03f Hordeum vulgare testa... 436 e-120
gb|BM816139.1|BM816139 HC105G09_T3.ab1 HC Hordeum vulgare s... 430 e-118
gb|AV914152.1|AV914152 AV914152 K. Sato unpublished cDNA li... 412 e-113
gb|CB876338.1|CB876338 HX10P19w HX Hordeum vulgare subsp. v... 412 e-113
gb|BE195554.3|BE195554 HVSMEh0089G13f Hordeum vulgare 5-45 ... 410 e-112
gb|CA023762.1|CA023762 HZ47F10r HZ Hordeum vulgare subsp. v... 410 e-112
gb|BU988138.1|BU988138 HF16M09r HF Hordeum vulgare subsp. v... 408 e-112
gb|AV925215.1|AV925215 AV925215 K. Sato unpublished cDNA li... 404 e-111
gb|BI776485.2|BI776485 EBpi05_SQ001_J01_R pistil, 8 DPA, no... 402 e-110
gb|BQ739972.1|BQ739972 HB107G12 HB Hordeum vulgare subsp. v... 400 e-109
gb|AV926207.1|AV926207 AV926207 K. Sato unpublished cDNA li... 394 e-108
gb|CB860194.1|CB860194 HI12P13w HI Hordeum vulgare subsp. v... 387 e-105
gb|AV931092.1|AV931092 AV931092 K. Sato unpublished cDNA li... 383 e-104
gb|BU967242.1|BU967242 HB03K11r BC Hordeum vulgare subsp. v... 383 e-104
gb|AV931093.1|AV931093 AV931093 K. Sato unpublished cDNA li... 379 e-103
gb|BU990492.1|BU990492 HF25D10r HF Hordeum vulgare subsp. v... 367 2e-099
gb|BJ464018.1|BJ464018 BJ464018 K. Sato unpublished cDNA li... 359 4e-097
gb|AV926208.1|AV926208 AV926208 K. Sato unpublished cDNA li... 355 7e-096
gb|AV913277.1|AV913277 AV913277 K. Sato unpublished cDNA li... 353 3e-095
gb|AV913278.1|AV913278 AV913278 K. Sato unpublished cDNA li... 353 3e-095
gb|BQ465284.1|BQ465284 HU03C22r HU Hordeum vulgare subsp. v... 353 3e-095
gb|CA022476.1|CA022476 HZ43F10r HZ Hordeum vulgare subsp. v... 351 1e-094
gb|BU989992.1|BU989992 HF23J07r HF Hordeum vulgare subsp. v... 339 4e-091
gb|BU984513.1|BU984513 HF04C11r HF Hordeum vulgare subsp. v... 337 2e-090
gb|BI779022.2|BI779022 EBro01_SQ002_J19_R root, 3 week, hyd... 325 6e-087
gb|CA025257.1|CA025257 HZ51J24r HZ Hordeum vulgare subsp. v... 321 1e-085
gb|AV930906.1|AV930906 AV930906 K. Sato unpublished cDNA li... 317 1e-084
gb|AV925770.1|AV925770 AV925770 K. Sato unpublished cDNA li... 297 1e-078
gb|CA009005.1|CA009005 HU12N24r HU Hordeum vulgare subsp. v... 287 1e-075
gb|AV930365.1|AV930365 AV930365 K. Sato unpublished cDNA li... 280 3e-073
gb|BJ466285.1|BJ466285 BJ466285 K. Sato unpublished cDNA li... 272 8e-071
gb|BG417165.1|BG417165 HVSMEk0016J06f Hordeum vulgare testa... 270 3e-070
gb|AV918572.1|AV918572 AV918572 K. Sato unpublished cDNA li... 270 3e-070
gb|AV832882.1|AV832882 AV832882 K. Sato unpublished cDNA li... 264 2e-068
gb|BU967165.1|BU967165 HB03H16r BC Hordeum vulgare subsp. v... 252 7e-065
gb|AV920051.1|AV920051 AV920051 K. Sato unpublished cDNA li... 250 3e-064
gb|BI959339.1|BI959339 HVSMEn0019E20f Hordeum vulgare rachi... 242 7e-062
gb|BI960696.1|BI960696 HVSMEn0025O11f Hordeum vulgare rachi... 242 7e-062
gb|AL503512.1|AL503512 AL503512 Hordeum vulgare Barke roots... 238 1e-060
gb|AV934882.1|AV934882 AV934882 K. Sato unpublished cDNA li... 238 1e-060
gb|CA026701.1|CA026701 HZ56L02r HZ Hordeum vulgare subsp. v... 238 1e-060
gb|CA030609.1|CA030609 HX07J05r HX Hordeum vulgare subsp. v... 238 1e-060
gb|CA030647.1|CA030647 HX07L05r HX Hordeum vulgare subsp. v... 238 1e-060
gb|BQ660846.1|BQ660846 HI05L24u HI Hordeum vulgare subsp. v... 234 2e-059
gb|BJ453328.1|BJ453328 BJ453328 K. Sato unpublished cDNA li... 212 6e-053
gb|AV919198.1|AV919198 AV919198 K. Sato unpublished cDNA li... 208 1e-051
gb|AV936150.1|AV936150 AV936150 K. Sato unpublished cDNA li... 206 4e-051
gb|AV918571.1|AV918571 AV918571 K. Sato unpublished cDNA li... 196 4e-048
gb|BQ660756.1|BQ660756 HI05F03u HI Hordeum vulgare subsp. v... 190 2e-046
gb|BQ766406.1|BQ766406 EBro08_SQ005_L20_R root, 3 week, dro... 190 2e-046
gb|BM370580.2|BM370580 EBro08_SQ004_K11_R root, 3 week, dro... 178 9e-043
gb|BF259974.3|BF259974 HVSMEf0020M07f Hordeum vulgare seedl... 167 3e-039
gb|AV923333.1|AV923333 AV923333 K. Sato unpublished cDNA li... 161 2e-037
gb|AV928513.1|AV928513 AV928513 K. Sato unpublished cDNA li... 161 2e-037
gb|BI958555.1|BI958555 HVSMEn0015J16f Hordeum vulgare rachi... 155 1e-035
gb|BE411751.1|BE411751 ISC008.H06F990806 ITEC ISC Barley Le... 151 2e-034
gb|BQ467842.1|BQ467842 HR01B16r HR Hordeum vulgare subsp. v... 151 2e-034
gb|BU994416.1|BU994416 HM07A02r HM Hordeum vulgare subsp. v... 149 8e-034
gb|CA019440.1|CA019440 HV11P23r HV Hordeum vulgare subsp. v... 149 8e-034
gb|CB875240.1|CB875240 HX07L05w HX Hordeum vulgare subsp. v... 149 8e-034
gb|CB875201.1|CB875201 HX07J05w HX Hordeum vulgare subsp. v... 147 3e-033
gb|CA017356.1|CA017356 HV12L21u HV Hordeum vulgare subsp. v... 145 1e-032
gb|BG343763.2|BG343763 HVSMEg0006L01f Hordeum vulgare pre-a... 141 2e-031
gb|BG300950.1|BG300950 HVSMEb0019A22f Hordeum vulgare seedl... 137 3e-030
gb|BI949437.1|BI949437 HVSMEl0013O09f Hordeum vulgare spike... 137 3e-030
gb|BI955734.1|BI955734 HVSMEm0024E12f Hordeum vulgare green... 137 3e-030
gb|AV917031.1|AV917031 AV917031 K. Sato unpublished cDNA li... 137 3e-030
gb|AJ462437.1|AJ462437 AJ462437 S00002 Hordeum vulgare subs... 137 3e-030
gb|BQ767053.1|BQ767053 EBro08_SQ007_H22_R root, 3 week, dro... 137 3e-030
gb|BU971759.1|BU971759 HB19J12r BC Hordeum vulgare subsp. v... 137 3e-030
gb|CA025840.1|CA025840 HZ53E19r HZ Hordeum vulgare subsp. v... 137 3e-030
gb|BG368285.2|BG368285 HVSMEi0017H01f Hordeum vulgare 20 DA... 135 1e-029
gb|AV929091.1|AV929091 AV929091 K. Sato unpublished cDNA li... 135 1e-029
gb|BJ460872.1|BJ460872 BJ460872 K. Sato unpublished cDNA li... 135 1e-029
gb|BQ469740.1|BQ469740 HZ01L16r HZ Hordeum vulgare subsp. v... 135 1e-029
gb|BF064711.2|BF064711 HV_CEb0017G02f Hordeum vulgare seedl... 131 2e-028
gb|BU985115.1|BU985115 HF06C19r HF Hordeum vulgare subsp. v... 131 2e-028
gb|AL503528.1|AL503528 AL503528 Hordeum vulgare Barke roots... 129 7e-028
gb|BF258768.2|BF258768 HVSMEf0016K01f Hordeum vulgare seedl... 129 7e-028
gb|BJ468308.1|BJ468308 BJ468308 K. Sato unpublished cDNA li... 129 7e-028
gb|BI779535.2|BI779535 EBro01_SQ004_F12_R root, 3 week, hyd... 129 7e-028
gb|CA031178.1|CA031178 HX09D18r HX Hordeum vulgare subsp. v... 129 7e-028
gb|AL499724.1|AL499724 AL499724 Hordeum vulgare Barke etiol... 127 3e-027
gb|BJ447699.1|BJ447699 BJ447699 K. Sato unpublished cDNA li... 127 3e-027
gb|BJ455449.1|BJ455449 BJ455449 K. Sato unpublished cDNA li... 127 3e-027
gb|BE411894.1|BE411894 ISC010.D05F990917 ITEC ISC Barley Le... 125 1e-026
gb|BQ663566.1|BQ663566 HU03C22u HU Hordeum vulgare subsp. v... 125 1e-026
gb|AV836573.1|AV836573 AV836573 K. Sato unpublished cDNA li... 123 5e-026
gb|AV927219.1|AV927219 AV927219 K. Sato unpublished cDNA li... 123 5e-026
gb|BF258638.2|BF258638 HVSMEf0016E13f Hordeum vulgare seedl... 121 2e-025
gb|BE060794.1|BE060794 HVSMEg0013G05f Hordeum vulgare pre-a... 119 7e-025
gb|BG343963.1|BG343963 HVSMEg0007D23f Hordeum vulgare pre-a... 119 7e-025
gb|BI948889.1|BI948889 HVSMEl0011E15f Hordeum vulgare spike... 119 7e-025
gb|AV923841.1|AV923841 AV923841 K. Sato unpublished cDNA li... 119 7e-025
gb|CA015150.1|CA015150 HT13H01r HT Hordeum vulgare subsp. v... 119 7e-025
gb|AL505671.1|AL505671 AL505671 Hordeum vulgare Barke roots... 115 1e-023
gb|AL505797.1|AL505797 AL505797 Hordeum vulgare Barke roots... 111 2e-022
gb|BF263370.1|BF263370 HV_CEa0006J03f Hordeum vulgare seedl... 111 2e-022
gb|BE214667.2|BE214667 HV_CEb0004C10f Hordeum vulgare seedl... 111 2e-022
gb|BQ463453.1|BQ463453 HI05F03r HI Hordeum vulgare subsp. v... 111 2e-022
gb|BQ472793.1|BQ472793 HB01H14r BC Hordeum vulgare subsp. v... 111 2e-022
gb|BF260649.2|BF260649 HVSMEf0022J05f Hordeum vulgare seedl... 109 7e-022
gb|BJ447591.1|BJ447591 BJ447591 K. Sato unpublished cDNA li... 109 7e-022
gb|CB882157.1|CB882157 HL01A17w HL Hordeum vulgare subsp. v... 109 7e-022
gb|BU972673.1|BU972673 HB22G06r BC Hordeum vulgare subsp. v... 107 3e-021
gb|AV923682.1|AV923682 AV923682 K. Sato unpublished cDNA li... 105 1e-020
gb|CA017986.1|CA017986 HV07A23r HV Hordeum vulgare subsp. v... 103 4e-020
gb|BQ468970.1|BQ468970 HM02P11r HM Hordeum vulgare subsp. v... 101 2e-019
gb|BF253907.1|BF253907 HVSMEf0002H08f Hordeum vulgare seedl... 100 7e-019
gb|BM376392.2|BM376392 EBem05_SQ002_B14_R embryo, 14 DPA, n... 96 1e-017
gb|CA011082.1|CA011082 HT07B01u HT Hordeum vulgare subsp. v... 96 1e-017
gb|BI956663.1|BI956663 HVSMEn0004K08f Hordeum vulgare rachi... 94 4e-017
gb|AL503049.1|AL503049 AL503049 Hordeum vulgare Barke roots... 92 2e-016
gb|CA015920.1|CA015920 HV11G20u HV Hordeum vulgare subsp. v... 90 6e-016
gb|BQ465804.1|BQ465804 HU04L18r HU Hordeum vulgare subsp. v... 88 2e-015
gb|BF628750.2|BF628750 HVSMEb0007M11f Hordeum vulgare seedl... 84 4e-014
gb|CA020497.1|CA020497 HZ36H21r HZ Hordeum vulgare subsp. v... 84 4e-014
gb|BE060456.3|BE060456 HVSMEg0012F17f Hordeum vulgare pre-a... 80 6e-013
gb|BG299430.2|BG299430 HVSMEa0019P14f Hordeum vulgare seedl... 78 2e-012
gb|BI948539.1|BI948539 HVSMEl0010A07f Hordeum vulgare spike... 76 1e-011
gb|BQ464910.1|BQ464910 HU02B19r HU Hordeum vulgare subsp. v... 74 4e-011
gb|BM372877.2|BM372877 EBma04_SQ002_E01_R maternal, 10 DPA,... 74 4e-011
gb|BI957138.1|BI957138 HVSMEn0007L07f Hordeum vulgare rachi... 72 1e-010
gb|BQ469182.1|BQ469182 HM03K08r HM Hordeum vulgare subsp. v... 72 1e-010
gb|BI959331.1|BI959331 HVSMEn0019E12f Hordeum vulgare rachi... 70 6e-010
gb|AL501744.1|AL501744 AL501744 Hordeum vulgare Barke roots... 66 9e-009
gb|BI958142.1|BI958142 HVSMEn0013J15f Hordeum vulgare rachi... 66 9e-009
gb|BQ661318.1|BQ661318 HM02P11u HM Hordeum vulgare subsp. v... 66 9e-009
gb|BQ765797.1|BQ765797 EBro03_SQ008_O01_R root, 3 week, wat... 66 9e-009
gb|CA024787.1|CA024787 HZ50E24r HZ Hordeum vulgare subsp. v... 66 9e-009
gb|BQ760759.1|BQ760759 EBro03_SQ003_G08_R root, 3 week, wat... 64 4e-008
gb|BU996532.1|BU996532 HM13O16r HM Hordeum vulgare subsp. v... 64 4e-008
gb|BU996252.1|BU996252 HM13A10r HM Hordeum vulgare subsp. v... 62 1e-007
gb|BM442942.2|BM442942 EBro02_SQ001_P12_R root, 3 week, hyd... 60 6e-007
gb|BQ768380.1|BQ768380 EBro08_SQ011_E16_R root, 3 week, dro... 60 6e-007
gb|BF631398.2|BF631398 HVSMEb0015N06f Hordeum vulgare seedl... 58 2e-006
gb|BI956476.1|BI956476 HVSMEn0003J21f Hordeum vulgare rachi... 58 2e-006
gb|BE216853.1|BE216853 HV_CEb0011N06f Hordeum vulgare seedl... 58 2e-006
gb|BF259601.3|BF259601 HVSMEf0019M06f Hordeum vulgare seedl... 56 9e-006
gb|AV836384.1|AV836384 AV836384 K. Sato unpublished cDNA li... 54 3e-005
gb|BG365821.2|BG365821 HVSMEi0004F18f Hordeum vulgare 20 DA... 54 3e-005
gb|BM817226.1|BM817226 HC109A10_T3.ab1 HC Hordeum vulgare s... 54 3e-005
gb|AL500926.1|AL500926 AL500926 Hordeum vulgare Barke roots... 52 1e-004
gb|BQ754945.1|BQ754945 EBed02_SQ003_E09_R endosperm, 8 DPA,... 52 1e-004
gb|BU969975.1|BU969975 HB13D11r BC Hordeum vulgare subsp. v... 50 5e-004
gb|AV930581.1|AV930581 AV930581 K. Sato unpublished cDNA li... 48 0.002
gb|BQ465393.1|BQ465393 HU03I04r HU Hordeum vulgare subsp. v... 44 0.034
gb|BQ661800.1|BQ661800 HP01F17w HP Hordeum vulgare subsp. v... 44 0.034
gb|BU967435.1|BU967435 HB04E22r BC Hordeum vulgare subsp. v... 44 0.034
gb|CA009625.1|CA009625 HU14K11r HU Hordeum vulgare subsp. v... 44 0.034
gb|CA031702.1|CA031702 HX10O05r HX Hordeum vulgare subsp. v... 44 0.034
>gb|BF624748.2|BF624748 HVSMEa0017K05f Hordeum vulgare seedling shoot EST library HVcDNA0001
(Cold stress) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEa0017K05f, mRNA sequence
Length = 750
Score = 805 bits (406), Expect = 0.0
Identities = 646/724 (89%), Gaps = 4/724 (0%)
Strand = Plus / Minus
Query: 1400 tcatttgagacataagaagtgatttctcatcatcaaatccagcgccttcaactccctcct 1459
||||||||||||| |||| | |||||||||||||||| ||||| |||||||| ||||| |
Sbjct: 729 tcatttgagacatgagaatt-atttctcatcatcaaacccagcaccttcaacgccctctt 671
Query: 1460 ctatatcttcaagattgaatactggcacagaactgtccacatgcttctgtgactttttct 1519
|||| |||||||||||||| ||||| ||||||||||| |||||||| | |||||||||||
Sbjct: 670 ctatgtcttcaagattgaacactggaacagaactgtcgacatgcttgtttgactttttct 611
Query: 1520 tgtctgagccc---ttctttgatttgcttcccttcttcctgccaccacatagtgatgaca 1576
| ||||||| | |||||||| |||||| |||||||| |||| ||||| ||||||| ||
Sbjct: 610 tatctgagctccttttctttgacttgcttgccttcttcttgcccccacacagtgatgcca 551
Query: 1577 agaaaccacccttcttttgcttaattgggggctcataaccatatagagctgttctgttga 1636
|||||| |||||| |||||| ||||| ||||||||||| | ||| ||||||||||
Sbjct: 550 agaaacttggcttcttcgccttaatcgggggttcataaccatagatagccgttctgttga 491
Query: 1637 aaacacagccagtgcccacataaactggtccttggatgccatcaagacctctcaagttaa 1696
||||||| ||||| |||||||||||||| ||||| ||||||||||| || ||||||||||
Sbjct: 490 aaacacaaccagttcccacataaactggcccttgaatgccatcaaggcccctcaagttaa 431
Query: 1697 tatcgaaaaacacggtgttcctgttggcatatcgatcattcctatcaataccatcgaacc 1756
|||| ||||| || ||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 430 tatcaaaaaagacagtgttcctgttcgcatatcgatcattcctatcaataccatcaaacc 371
Query: 1757 tctggggaaactgaacatagcagacactccttcctaggttaggatccataaggaagcaca 1816
|||| || ||||| ||||| ||||| | |||||||| |||||||| ||||||||||
Sbjct: 370 tctgtgggaactgcacataacagacttgcggacctaggtttggatccattaggaagcaca 311
Query: 1817 tagcttccctgagagccttactgttgttgatgtagtgatcacaatcaagattcaacatgt 1876
||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 tagcttcccggacagccttgctgttgttgatgtagtgatcacaatcaagattcaacatgt 251
Query: 1877 attgtccattggtaagcacagctgagacgcggacaagagcattcatggcaccagctttct 1936
|||||||||| ||||| ||||| ||||| || ||||| ||||||||||||||||| ||||
Sbjct: 250 attgtccattagtaaggacagccgagacacgaacaagggcattcatggcaccagccttct 191
Query: 1937 tgtgatgctggaatccaggacgtttttcacgagaaacatagaccaaacggggtagctcat 1996
|||| ||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||
Sbjct: 190 tgtggtgctggaatccaggacgcttttcacgagacacatagaccaaacgggggagctcat 131
Query: 1997 taccctcagtatcaagaccaccactgtgaccaaggaaaacctgaatcattccaggatggt 2056
||||||| |||||||| |||||||||||||||||||||||||||||||||||||| || |
Sbjct: 130 taccctcggtatcaaggccaccactgtgaccaaggaaaacctgaatcattccagggtgat 71
Query: 2057 ccctggtattgtttcctggccatggtgtgccatcttgcatgatccatccttcctcaggga 2116
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 70 ccctggtattgtttcctggccatggtgtgccatcttgcatgatccatccttcctcgggga 11
Query: 2117 cttt 2120
||||
Sbjct: 10 cttt 7
>gb|BQ468579.1|BQ468579 HM01K12T HM Hordeum vulgare subsp. vulgare cDNA clone HM01K12
5-PRIME, mRNA sequence
Length = 676
Score = 714 bits (360), Expect = 0.0
Identities = 591/668 (88%)
Strand = Plus / Minus
Query: 2801 ccatgttgtaatcagttgatgcatcaatatcaccaacaccccggccctcagagggagcaa 2860
|||||||||| ||||| |||||||| || ||| | | |||| || |||||||||||||
Sbjct: 676 ccatgttgtattcagtagatgcatcgatgtcagtagctgcccgaccttcagagggagcaa 617
Query: 2861 tgcttgtgccattcgtcatgggaattgttcccttgtcctgcttcattttccagccatcaa 2920
||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 616 tgcttgtgccattagtcatgggaattgcacccttgtcctgcttcattttccagccatcaa 557
Query: 2921 ccctctctttccaggcaacattcccaacgctaccagagaattccctcgacggatttgatg 2980
| ||||||||||| ||||||||||||| || |||||||| ||||| |||||||||| ||
Sbjct: 556 ctctctctttccaagcaacattcccaatactgccagagaactcccttgacggatttggtg 497
Query: 2981 aatgattcatatagggaaatggggcgcgcctgccaatgttcccagtaggagacatcatat 3040
||||||||| ||||| || || || || |||| |||||||||||||| ||||||||||
Sbjct: 496 aatgattcacgtaggggaacggagcacgtctgctgatgttcccagtaggggacatcatat 437
Query: 3041 gatggtcaggggaagcaccagggatttctcccgaaatctggctgttagtgactgacggga 3100
|||| ||||||||||| ||||||||||||| || |||||||||||||||||||| ||||
Sbjct: 436 gatgatcaggggaagctccagggatttctcttgacatctggctgttagtgactgaaggga 377
Query: 3101 tgtatccccgagggatctcaccactgtcgtacttggtaagcccgatctcaccactgtcat 3160
|||||||| ||||||||| |||||||||||||||| ||||||||||| ||||||||||
Sbjct: 376 cgtatcccctagggatctctccactgtcgtacttggagagcccgatctcgccactgtcat 317
Query: 3161 acttggggcggccaacatccccgctgcccccagcattcatgcgccagctgcgcatcctgt 3220
|||||||| ||||||||| ||| |||||||| | ||||||||||||||||||||||| |
Sbjct: 316 acttggggtggccaacattcccactgcccccggtgttcatgcgccagctgcgcatcctat 257
Query: 3221 cagcaatcttctgcttctggtcgtcattgccagatgcagggtagttgaagtcgctagcat 3280
|||||||||||||||||||||| ||| ||||||||||||||||||||||||| || |||
Sbjct: 256 cagcaatcttctgcttctggtcctcagtgccagatgcagggtagttgaagtcactgccat 197
Query: 3281 catcggcatcagtatcgtctccttcctcccctcggatcgctggactccccttgtggcgct 3340
||||||||||||| ||||| ||||||||||| ||||||||||| ||||| ||||||||||
Sbjct: 196 catcggcatcagtgtcgtcgccttcctccccgcggatcgctgggctccctttgtggcgct 137
Query: 3341 tgtacttgtttttgcactgggggcacgcttgtgtgccgtccttgcgctcgtactcgtagc 3400
|||||||| | ||||||||| |||| || || ||||| ||||||||||||| ||||||||
Sbjct: 136 tgtacttggtcttgcactggaggcaggcctgggtgccctccttgcgctcgtgctcgtagc 77
Query: 3401 aggggcggcacaccgggaacccgcagacgtcgcaggcggtgaagacgtctccctccgccg 3460
|||||||||| |||||||| | |||||||||||||||||||||||| || || ||| |||
Sbjct: 76 aggggcggcagaccgggaagcggcagacgtcgcaggcggtgaagacctcgccgtccaccg 17
Query: 3461 tagtgccc 3468
| ||||||
Sbjct: 16 tggtgccc 9
>gb|BG368813.1|BG368813 HVSMEi0020M13f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0020M13f, mRNA sequence
Length = 870
Score = 710 bits (358), Expect = 0.0
Identities = 674/774 (87%), Gaps = 7/774 (0%)
Strand = Plus / Minus
Query: 1090 agcacctggttcagacggtctgagagattgatgggagccgatcccttgaaggccggccgc 1149
||||| ||||||||||| | ||| ||||||||||| || ||||||||||| || ||| ||
Sbjct: 772 agcacttggttcagacgatttgaaagattgatgggggcagatcccttgaaagctggc-gc 714
Query: 1150 tta-ggcatgcagtagatcgacc-gccagcctcgtgcgtgcatcttgaacccagtgagaa 1207
||| |||||||| |||| |||| ||||||||| ||||||| ||||||| ||||||||||
Sbjct: 713 ttaaggcatgcaatagactgacccgccagcctcttgcgtgcttcttgaatccagtgagaa 654
Query: 1208 tatcttccgtcacagaaccatagatccacccaatctcagttccccattcaatcttgtcct 1267
||||||| || ||||| ||||| ||||| ||||||||||||||||| ||| |||||| |
Sbjct: 653 tatcttctgtgacagatccataaatccaaccaatctcagttccccactcagacttgtcnt 594
Query: 1268 cgtagccacaacttatgacatggatagcttctttcagaagagattccggagtcgcagact 1327
| |||||||| ||||||||||||||||||||| || ||||||||| ||||| | ||||
Sbjct: 593 catagccacacnttatgacatggatagcttctt-caaaagagattctggagtggaggact 535
Query: 1328 gaggaacaccaccatattccatcagagtggacgcaacaaaagctgcagattggccaaatc 1387
||||||||||||||||||||||||||||||| |||||||| ||||| || ||||||||||
Sbjct: 534 gaggaacaccaccatattccatcagagtggaggcaacaaatgctgctgactggccaaatc 475
Query: 1388 tcttctccaagctcatttgagacataagaagtgatttctcatcatcaaatccagcgcctt 1447
||||||| ||||||||||||||||| |||| |||||||||||||||||| ||||| ||||
Sbjct: 474 tcttctctaagctcatttgagacatgagaactgatttctcatcatcaaacccagcacctt 415
Query: 1448 caactccctcctctatatcttcaagattgaatactggcacagaactgtccacatgcttct 1507
|||| ||||||||||| |||||||||||||| ||||| ||||||||||| |||||||| |
Sbjct: 414 caacaccctcctctatgtcttcaagattgaacactggaacagaactgtcgacatgcttgt 355
Query: 1508 gtgactttttcttgtctgagccc---ttctttgatttgcttcccttcttcctgccaccac 1564
|||||||||||| ||||||| | |||||||| |||||| |||||||| |||| ||||
Sbjct: 354 ttgactttttcttatctgagctccttttctttgacttgcttgccttcttcttgcccccac 295
Query: 1565 atagtgatgacaagaaaccacccttcttttgcttaattgggggctcataaccatatagag 1624
| ||||||| |||||||| |||||| |||||| ||||| ||||||||||| | ||
Sbjct: 294 acagtgatgccaagaaacttggcttcttcgccttaatcgggggttcataaccatagatag 235
Query: 1625 ctgttctgttgaaaacacagccagtgcccacataaactggtccttggatgccatcaagac 1684
| ||||||||||||||||| ||||| |||||||||||||| ||||| ||||||||||| |
Sbjct: 234 ccgttctgttgaaaacacaaccagttcccacataaactggcccttgaatgccatcaaggc 175
Query: 1685 ctctcaagttaatatcgaaaaacacggtgttcctgttggcatatcgatcattcctatcaa 1744
| |||||||||||||| ||||| || ||||||||||| ||||||||||||||||||||||
Sbjct: 174 ccctcaagttaatatcaaaaaagacagtgttcctgttcgcatatcgatcattcctatcaa 115
Query: 1745 taccatcgaacctctggggaaactgaacatagcagacactccttcctaggttaggatcca 1804
||||||| |||||||| || ||||| ||||| ||||| | |||||||| |||||||
Sbjct: 114 taccatcaaacctctgtgggaactgcacataacagacttgcggacctaggtttggatcca 55
Query: 1805 taaggaagcacatagcttccctgagagccttactgttgttgatgtagtgatcac 1858
| ||||||||||||||||||| || |||||| ||||||||||||||||||||||
Sbjct: 54 ttaggaagcacatagcttcccggacagccttgctgttgttgatgtagtgatcac 1
>gb|CK124710.1|CK124710 BES1824110c01 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010C0110 5-PRIME, mRNA sequence
Length = 710
Score = 698 bits (352), Expect = 0.0
Identities = 600/681 (88%), Gaps = 6/681 (0%)
Strand = Plus / Minus
Query: 1446 ttcaactccctcctctatatcttcaagattgaatactggcacagaactgtccacatgctt 1505
|||||| ||||| | ||| | |||||||||||| |||| ||||||||||| ||||||||
Sbjct: 690 ttcaacaccctcntttatnttttcaagattgaacnctggaacagaactgtcgacatgctt 631
Query: 1506 ctgt-gactttttcttgtctgagccc----ttctttgatttgcttcccttcttcctg-cc 1559
| | ||||||||||| | ||||| | |||||||| |||||| |||||||| || ||
Sbjct: 630 gtttngactttttcttatntgagctcctttttctttgacttgcttgccttcttcttgncc 571
Query: 1560 accacatagtgatgacaagaaaccacccttcttttgcttaattgggggctcataaccata 1619
||||| ||||||| |||||||| |||||| |||||| ||||| |||||||||||
Sbjct: 570 cccacacagtgatgccaagaaacttggcttcttcgccttaatcgggggttcataaccata 511
Query: 1620 tagagctgttctgttgaaaacacagccagtgcccacataaactggtccttggatgccatc 1679
| ||| ||||||||||||||||| ||||| ||||||||||||| ||||| ||||||||
Sbjct: 510 gatagccgttctgttgaaaacacaaccagtttccacataaactggcccttgaatgccatc 451
Query: 1680 aagacctctcaagttaatatcgaaaaacacggtgttcctgttggcatatcgatcattcct 1739
||| || |||||||||||||| ||||| || ||||||||||| |||||||||||||||||
Sbjct: 450 aaggcccctcaagttaatatcaaaaaagacagtgttcctgttcgcatatcgatcattcct 391
Query: 1740 atcaataccatcgaacctctggggaaactgaacatagcagacactccttcctaggttagg 1799
|||||||||||| |||||||| || ||||| ||||| ||||| | |||||||| ||
Sbjct: 390 atcaataccatcaaacctctgtgggaactgcacataacagacttgcggacctaggtttgg 331
Query: 1800 atccataaggaagcacatagcttccctgagagccttactgttgttgatgtagtgatcaca 1859
|||||| ||||||||||||||||||| || |||||| |||||||||||||||||||||||
Sbjct: 330 atccattaggaagcacatagcttcccggacagccttgctgttgttgatgtagtgatcaca 271
Query: 1860 atcaagattcaacatgtattgtccattggtaagcacagctgagacgcggacaagagcatt 1919
||||||||||||||||||||||||||| ||||| ||||| ||||| || ||||| |||||
Sbjct: 270 atcaagattcaacatgtattgtccattagtaaggacagccgagacacgaacaagggcatt 211
Query: 1920 catggcaccagctttcttgtgatgctggaatccaggacgtttttcacgagaaacatagac 1979
|||||||||||| |||||||| ||||||||||||||||| ||||||||||| ||||||||
Sbjct: 210 catggcaccagccttcttgtggtgctggaatccaggacgcttttcacgagacacatagac 151
Query: 1980 caaacggggtagctcattaccctcagtatcaagaccaccactgtgaccaaggaaaacctg 2039
||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 150 caaacgggggagctcattaccctcggtatcaaggccaccactgtgaccaaggaaaacctg 91
Query: 2040 aatcattccaggatggtccctggtattgtttcctggccatggtgtgccatcttgcatgat 2099
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90 aatcattccagggtgatccctggtattgtttcctggccatggtgtgccatcttgcatgat 31
Query: 2100 ccatccttcctcagggacttt 2120
|||||||||||| ||||||||
Sbjct: 30 ccatccttcctcggggacttt 10
>gb|CB882206.1|CB882206 HL01D01w HL Hordeum vulgare subsp. vulgare cDNA clone HL01D01
3-PRIME, mRNA sequence
Length = 700
Score = 648 bits (327), Expect = 0.0
Identities = 612/702 (87%), Gaps = 5/702 (0%)
Strand = Plus / Minus
Query: 2361 atcagatacatagcaagagaccttatccacaggatagtccacagcgagaatggatagcac 2420
|||||||||||||||||||||||| ||||| ||||| || ||||| ||||||||||||||
Sbjct: 700 atcagatacatagcaagagaccttgtccacgggataatcaacagcaagaatggatagcac 641
Query: 2421 ggtattggcagtgacaagaggaggctccttcattgggtcgacagtactgacaaaaatgtc 2480
||| ||||||||||| | ||| |||||||||| |||||||| |||||||| || |||||
Sbjct: 640 ggtgttggcagtgacgataggtggctccttcaaggggtcgactgtactgacgaatatgtc 581
Query: 2481 aacagcagccaactgagatggctcaccttcccggtcataccttaatgcgagtctatcaag 2540
|||||||||||||||||| || |||||||| |||||||||||||| || |||||||||||
Sbjct: 580 aacagcagccaactgagagggttcaccttctcggtcataccttaaagccagtctatcaag 521
Query: 2541 gtaagtctcgcggttgattggaaaccactttggaaactgatccaatatccaggaaagagc 2600
||| ||||| |||||||||||||||||||| || |||||||||| ||||||||| | |||
Sbjct: 520 gtaggtctcccggttgattggaaaccacttcgggaactgatccagtatccaggataaagc 461
Query: 2601 aaaccagatctcacatataacagatagaagccacagtgggtatgcattacgcacaggatt 2660
|||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||||
Sbjct: 460 aaaccaaatctcacatataacagataaaagccacagcgggtatgcattacgcacaggatt 401
Query: 2661 tgtgatccggtagtgcaagaagatgcttagaacaatcaatcgtagcacaatgaccatcct 2720
||||| |||||||||| ||||||||||||||||| ||| || || ||||||||||| ||
Sbjct: 400 tgtgagacggtagtgcaggaagatgcttagaacaaccaaccgcagaacaatgaccattct 341
Query: 2721 gtatggatttatcctggaggaaggaagtggaactttcctagatagaggctggcgagtttc 2780
||| |||||||| |||| |||| || || || || |||||||||||||||||||||||
Sbjct: 340 gtacggatttattttggatgaagcaatggggacctttctagatagaggctggcgagtttc 281
Query: 2781 atcgtttaataaggcatcttccatgttgtaatcagttgatgcatcaatatcaccaacacc 2840
||| || | ||| || |||||||||||||| ||||| |||||||| || ||| | | |
Sbjct: 280 atcattcagtaaagcgtcttccatgttgtattcagtagatgcatcgatgtcagtagctgc 221
Query: 2841 ccggccctcagagggagcaatgcttgtgccattcgtcatgggaattgttcccttgtcctg 2900
||| || |||||||||||||||||||||||||| ||||||||||||| |||||||||||
Sbjct: 220 ccgaccttcagagggagcaatgcttgtgccattagtcatgggaattgcacccttgtcctg 161
Query: 2901 cttcattttccagccatcaaccctctctttccaggcaacattcccaacgctaccagagaa 2960
||||||||||||||||||||| ||||||||||| ||||||||||||| || |||||||
Sbjct: 160 cttcattttccagccatcaactctctctttccaagcaacattcccaatactgccagagac 101
Query: 2961 ttccctcgacggatttgatgaatgattcatatagggaaatggggcgcgcctgccaatgtt 3020
| ||| |||||| ||| ||||||||||| ||||| | || || || |||| |||||
Sbjct: 100 t--cct-gacgga-ttggtgaatgattcacgtaggg-gacggagcacgtctgctgatgtt 46
Query: 3021 cccagtaggagacatcatatgatggtcaggggaagcaccagg 3062
||||||||| |||||||||||||| ||||||||||| |||||
Sbjct: 45 cccagtaggggacatcatatgatgatcaggggaagctccagg 4
>gb|BI956967.1|BI956967 HVSMEn0006I08f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0006I08f,
mRNA sequence
Length = 898
Score = 646 bits (326), Expect = 0.0
Identities = 487/538 (90%), Gaps = 2/538 (0%)
Strand = Plus / Minus
Query: 1917 attcatggcaccagctttcttgtgatgctggaatccaggacg-tttttcacgagaaacat 1975
||||||||||||||| |||||||| |||||||||||||| | |||||||||||| ||||
Sbjct: 540 attcatggcaccagccttcttgtggggctggaatccaggaggctttttcacgagacacat 481
Query: 1976 agaccaaacggggtagctcattaccctcagtatcaagaccacc-actgtgaccaaggaaa 2034
||||||||||||| ||||||||||||| |||||||| ||||| ||||||||||||||||
Sbjct: 480 agaccaaacgggggagctcattacccttggtatcaaggccacccactgtgaccaaggaaa 421
Query: 2035 acctgaatcattccaggatggtccctggtattgtttcctggccatggtgtgccatcttgc 2094
||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 420 acctgaatcattccagggtgatccctggtattgtttcctggccatggtgtgccatcttgc 361
Query: 2095 atgatccatccttcctcagggactttttgtgccttagcaacaaggccatttaccctaatt 2154
||||||||||||||||| |||||||| |||||||| ||| |||||||||| |||||||
Sbjct: 360 atgatccatccttcctcggggactttcaatgccttagaaactaggccatttatcctaatt 301
Query: 2155 ttgaattcttcatattctctcttcatggcccggcggtctttaacaaatgaagggtgcact 2214
|| |||||||||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 300 ttaaattcttcatattctctcttcatggcccggcggtctttaacaaatgaaggctggact 241
Query: 2215 ttgtccttcaagtaatcaattttctgggagaagtaccattcaggagctctaggttcaatg 2274
||||| |||||||||||||||||||| ||||||||||| ||||||||||| ||||| |||
Sbjct: 240 ttgtctttcaagtaatcaattttctgagagaagtaccactcaggagctctgggttcgatg 181
Query: 2275 ttgtacttcttaacaaatggcacccattttctagcaaactctgaagtctcagctagtgca 2334
| ||||||||||||||||| ||||| || ||||||||||||||||||||||| | |||
Sbjct: 180 tcatacttcttaacaaatggtacccacttcctagcaaactctgaagtctcagccaatgcg 121
Query: 2335 tcaaatgtcagcatagcagctccatcatcagatacatagcaagagaccttatccacagga 2394
||||| || ||||| | ||||| |||||||||||||||||||||||||| ||||| |||
Sbjct: 120 tcaaaagtgagcattgatgctccgtcatcagatacatagcaagagaccttgtccacggga 61
Query: 2395 tagtccacagcgagaatggatagcacggtattggcagtgacaagaggaggctccttca 2452
|| ||| |||| ||||||||||||||||| ||||||||||| | ||| ||||||||||
Sbjct: 60 taatccccagcaagaatggatagcacggtgttggcagtgacgataggtggctccttca 3
>gb|AL504419.1|AL504419 AL504419 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW05D18V 5', mRNA sequence
Length = 671
Score = 644 bits (325), Expect = 0.0
Identities = 581/662 (87%), Gaps = 6/662 (0%)
Strand = Plus / Minus
Query: 994 gcgaatctctccaag-aacttcaggcgtcc-tccgtagccgtaccatag-ggggcaatgc 1050
|||||||||||| || ||||| ||||| || || |||||| ||||||| ||||||||||
Sbjct: 671 gcgaatctctcccaggaacttgaggcggccctcggtagccataccataaaggggcaatgc 612
Query: 1051 cggctgaaaaggatttccactgaaccgagagcccaccggagcacctggttcagacggtct 1110
||||||||||| ||||| | ||||| ||||||||||||||||| ||||||||||| |||
Sbjct: 611 cggctgaaaagaatttcancggaaccaagagcccaccggagcacttggttcagacgatct 552
Query: 1111 gagagattgatgggagccgatcccttgaaggccggccgcttaggcatgcagtagatcgac 1170
|| ||||||||||| || ||||||||||| || || |||||||||||||| |||| |||
Sbjct: 551 gaaagattgatgggggcagatcccttgaaagctgggcgcttaggcatgcaatagactgac 492
Query: 1171 cgccagcctcgtgcgtgcatcttgaacccagtgagaatatcttccgtcacagaaccatag 1230
|||||||||| ||||||||||||||| ||||||||||||||||| || ||||| |||||
Sbjct: 491 cgccagcctcttgcgtgcatcttgaatccagtgagaatatcttctgtgacagatccataa 432
Query: 1231 atccacccaatctcagttccccattcaatcttgtcctcgtagccacaacttatgacatgg 1290
||||| ||||||||||||||||| ||| ||||||||| |||||||||||||||||||||
Sbjct: 431 atccaaccaatctcagttccccactcagacttgtcctcatagccacaacttatgacatgg 372
Query: 1291 atagcttctttcagaagagattccggagtcgcagactgaggaacaccaccatattccatc 1350
||||||||||||| ||||||||| ||||| | |||||||||||||||||||||||||||
Sbjct: 371 atagcttctttcaaaagagattctggagtggaggactgaggaacaccaccatattccatc 312
Query: 1351 agagtggacgcaacaaaagctgcagattggccaaatctcttctccaagctcatttgagac 1410
|||||||| |||||||| ||||| || ||||||||||||||||| |||||||||||||||
Sbjct: 311 agagtggaggcaacaaatgctgctgactggccaaatctcttctctaagctcatttgagac 252
Query: 1411 ataagaagtgatttctcatcatcaaatccagcgccttcaactccctcctctatatcttca 1470
|| |||| |||||||||||||||||| ||||| |||||||| ||||||||||| ||||||
Sbjct: 251 atgagaactgatttctcatcatcaaacccagcaccttcaacaccctcctctatgtcttca 192
Query: 1471 agattgaatactggcacagaactgtccacatgcttctgtgactttttcttgtctgagccc 1530
|||||||| ||||| ||||||||||| |||||||| | |||||||||||| ||||||| |
Sbjct: 191 agattgaacactggaacagaactgtcgacatgcttgtttgactttttcttatctgagctc 132
Query: 1531 ---ttctttgatttgcttcccttcttcctgccaccacatagtgatgacaagaaaccaccc 1587
|||||||| |||||| |||||||| |||| ||||| ||||||| |||||||| |
Sbjct: 131 cttttctttgacttgcttgccttcttcttgcccccacacagtgatgccaagaaacttggc 72
Query: 1588 ttcttttgcttaattgggggctcataaccatatagagctgttctgttgaaaacacagcca 1647
||||| |||||| ||||| ||||||||||| | ||| ||||||||||||||||| |||
Sbjct: 71 ttcttcgccttaatcgggggttcataaccatagatagccgttctgttgaaaacacaacca 12
Query: 1648 gt 1649
||
Sbjct: 11 gt 10
>gb|AV836682.1|AV836682 AV836682 K. Sato unpublished cDNA library: Hordeum vulgare subsp.
vulgare seedling leaves second leaf stage Hordeum vulgare
subsp. vulgare cDNA clone basd24c20, mRNA sequence
Length = 505
Score = 636 bits (321), Expect = e-180
Identities = 459/505 (90%)
Strand = Plus / Minus
Query: 1667 cttggatgccatcaagacctctcaagttaatatcgaaaaacacggtgttcctgttggcat 1726
|||| ||||||||||| || |||||||||||||| ||||| || ||||||||||| ||||
Sbjct: 505 cttgaatgccatcaaggcccctcaagttaatatcaaaaaagacagtgttcctgttcgcat 446
Query: 1727 atcgatcattcctatcaataccatcgaacctctggggaaactgaacatagcagacactcc 1786
||||||||||||||||||||||||| |||||||| || ||||| ||||| ||||| |
Sbjct: 445 atcgatcattcctatcaataccatcaaacctctgtgggaactgcacataacagacttgcg 386
Query: 1787 ttcctaggttaggatccataaggaagcacatagcttccctgagagccttactgttgttga 1846
|||||||| |||||||| ||||||||||||||||||| || |||||| ||||||||||
Sbjct: 385 gacctaggtttggatccattaggaagcacatagcttcccggacagccttgctgttgttga 326
Query: 1847 tgtagtgatcacaatcaagattcaacatgtattgtccattggtaagcacagctgagacgc 1906
|||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||| |
Sbjct: 325 tgtagtgatcacaatcaagattcaacatgtattgtccattagtaaggacagccgagacac 266
Query: 1907 ggacaagagcattcatggcaccagctttcttgtgatgctggaatccaggacgtttttcac 1966
| ||||| ||||||||||||||||| |||||||| ||||||||||||||||| |||||||
Sbjct: 265 gaacaagggcattcatggcaccagccttcttgtggtgctggaatccaggacgcttttcac 206
Query: 1967 gagaaacatagaccaaacggggtagctcattaccctcagtatcaagaccaccactgtgac 2026
|||| ||||||||||||||||| |||||||||||||| |||||||| |||||||||||||
Sbjct: 205 gagacacatagaccaaacgggggagctcattaccctcggtatcaaggccaccactgtgac 146
Query: 2027 caaggaaaacctgaatcattccaggatggtccctggtattgtttcctggccatggtgtgc 2086
||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 145 caaggaaaacctgaatcattccagggtgatccctggtattgtttcctggccatggtgtgc 86
Query: 2087 catcttgcatgatccatccttcctcagggactttttgtgccttagcaacaaggccattta 2146
||||||||||||||||||||||||| |||||||| |||||||| ||| ||||||||||
Sbjct: 85 catcttgcatgatccatccttcctcggggactttcaatgccttagaaactaggccattta 26
Query: 2147 ccctaattttgaattcttcatattc 2171
||||||||| ||||||||||||||
Sbjct: 25 tcctaattttaaattcttcatattc 1
>gb|BF259426.2|BF259426 HVSMEf0019B07f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0019B07f, mRNA sequence
Length = 755
Score = 626 bits (316), Expect = e-177
Identities = 646/753 (85%), Gaps = 5/753 (0%)
Strand = Plus / Minus
Query: 1182 tgcgtgcatcttgaacccagtgagaatatcttccgtcacagaaccatagatccacccaat 1241
|||||||||||||| |||||||||| || ||| || |||| ||||| |||| |||||
Sbjct: 754 tgcgtgcatcttgattccagtgagaaaattttctgtgccagatccataattccaaccaat 695
Query: 1242 ctcagttccccattcaatcttgtcctcgtagccacaacttatgacatggatagcttcttt 1301
|||||||||||| ||| |||||| || |||||||||||||||||||||||||||| |||
Sbjct: 694 ctcagttccccactcagacttgtcttcatagccacaacttatgacatggatagctt-ttt 636
Query: 1302 cagaagagattccggagtcgcagactgaggaacaccaccatattccatcagagtggacgc 1361
|| ||||||||| ||||| | ||||||||||||||||||||||||||||||||||| ||
Sbjct: 635 caaaagagattctggagtggaggactgaggaacaccaccatattccatcagagtggaggc 576
Query: 1362 aacaaaagctgcagattggccaaatctcttctccaagctcatttgagacataagaagtga 1421
|||||| ||||| || |||| |||| ||||||| ||||||||||||||||| |||| |||
Sbjct: 575 aacaaatgctgctgactggc-aaatttcttctctaagctcatttgagacatgagaactga 517
Query: 1422 tttctcatcatcaaatccagcgccttcaactccctcctctatatcttcaagattgaatac 1481
||||||||||||||| ||||| |||||||| ||||||||||| |||||||||||||| ||
Sbjct: 516 tttctcatcatcaaacccagcaccttcaacaccctcctctatgtcttcaagattgaacac 457
Query: 1482 tggcacagaactgtccacatgcttctgtgactttttcttgtctgagccc---ttctttga 1538
|| ||||||||||| |||||||| | |||||||||||| ||||||| | ||||||||
Sbjct: 456 tgcaacagaactgtcgacatgcttgtttgactttttcttatctgagctccttttctttga 397
Query: 1539 tttgcttcccttcttcctgccaccacatagtgatgacaagaaaccacccttcttttgctt 1598
|||||| ||||| || |||| ||||| ||||||| |||||||| ||| || |||
Sbjct: 396 cttgcttgccttcatcttgcccccacacagtgatgccaagaaacttggcttattcgcctt 337
Query: 1599 aattgggggctcataaccatatagagctgttctgttgaaaacacagccagtgcccacata 1658
||| ||||| ||||||||||| | ||| ||||||||||||||||| |||| || |||||
Sbjct: 336 aatcgggggttcataaccatagatagccgttctgttgaaaacacaagcagttccgacata 277
Query: 1659 aactggtccttggatgccatcaagacctctcaagttaatatcgaaaaacacggtgttcct 1718
| |||| ||||| ||||||| || | |||||||||||||| ||||| || ||||||||
Sbjct: 276 agctggcccttgagtgccatcnaggcacctcaagttaatatcaaaaaagacagtgttcct 217
Query: 1719 gttggcatatcgatcattcctatcaataccatcgaacctctggggaaactgaacatagca 1778
||||||||||||||||||||||||||||||||| | | |||| || || || ||||| ||
Sbjct: 216 gttggcatatcgatcattcctatcaataccatcaaccttctgtgggaattgcacataaca 157
Query: 1779 gacactccttcctaggttaggatccataaggaagcacatagcttccctgagagccttact 1838
||| | | |||||| |||||||| ||||||||||||||||||| || |||||| ||
Sbjct: 156 gacttccggacttaggtttggatccattaggaagcacatagcttcccggacagccttgct 97
Query: 1839 gttgttgatgtagtgatcacaatcaagattcaacatgtattgtccattggtaagcacagc 1898
|||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct: 96 gttgttgatgtagtgatcacaatcaagattcaacatgtattgtccattagtaaggacagc 37
Query: 1899 tgagacgcggacaagagcattcatggcaccagc 1931
||||| || ||||| |||||||||||||||||
Sbjct: 36 cgagacacgaacaagggcattcatggcaccagc 4
>gb|BQ471177.1|BQ471177 HV01F24T HV Hordeum vulgare subsp. vulgare cDNA clone HV01F24
5-PRIME, mRNA sequence
Length = 625
Score = 618 bits (312), Expect = e-175
Identities = 531/604 (87%)
Strand = Plus / Minus
Query: 2575 aactgatccaatatccaggaaagagcaaaccagatctcacatataacagatagaagccac 2634
|||||||||| ||||||||| | ||||||||| ||||||||||||||||||| |||||||
Sbjct: 617 aactgatccagtatccaggataaagcaaaccaaatctcacatataacagataaaagccac 558
Query: 2635 agtgggtatgcattacgcacaggatttgtgatccggtagtgcaagaagatgcttagaaca 2694
|| |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||
Sbjct: 557 agcgggtatgcattacgcacaggatttgtgagacggtagtgcaggaagatgcttagaaca 498
Query: 2695 atcaatcgtagcacaatgaccatcctgtatggatttatcctggaggaaggaagtggaact 2754
| ||| || || ||||||||||| ||||| |||||||| |||| |||| || || ||
Sbjct: 497 accaaccgcagaacaatgaccattctgtacggatttattttggatgaagcaatggggacc 438
Query: 2755 ttcctagatagaggctggcgagtttcatcgtttaataaggcatcttccatgttgtaatca 2814
|| |||||||||||||||||||||||||| || | ||| || |||||||||||||| |||
Sbjct: 437 tttctagatagaggctggcgagtttcatcattcagtaaagcgtcttccatgttgtattca 378
Query: 2815 gttgatgcatcaatatcaccaacaccccggccctcagagggagcaatgcttgtgccattc 2874
|| |||||||| || ||| | | |||| || ||||||||||||||||||||||||||
Sbjct: 377 gtagatgcatcgatgtcagtagctgcccgaccttcagagggagcaatgcttgtgccatta 318
Query: 2875 gtcatgggaattgttcccttgtcctgcttcattttccagccatcaaccctctctttccag 2934
||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 317 gtcatgggaattgcacccttgtcctgcttcattttccagccatcaactctctctttccaa 258
Query: 2935 gcaacattcccaacgctaccagagaattccctcgacggatttgatgaatgattcatatag 2994
||||||||||||| || |||||||| ||||| |||||||||| ||||||||||| |||
Sbjct: 257 gcaacattcccaatactgccagagaactcccttgacggatttggtgaatgattcacgtag 198
Query: 2995 ggaaatggggcgcgcctgccaatgttcccagtaggagacatcatatgatggtcaggggaa 3054
|| || || || || |||| |||||||||||||| |||||||||||||| |||||||||
Sbjct: 197 gggaacggagcacgtctgctgatgttcccagtaggggacatcatatgatgatcaggggaa 138
Query: 3055 gcaccagggatttctcccgaaatctggctgttagtgactgacgggatgtatccccgaggg 3114
|| |||||||||||||| || |||||||||||||||||||| |||| |||||||| ||||
Sbjct: 137 gctccagggatttctcctgacatctggctgttagtgactgaagggacgtatcccctaggg 78
Query: 3115 atctcaccactgtcgtacttggtaagcccgatctcaccactgtcatacttggggcggcca 3174
||||| |||||||||||||||| ||||||||||| |||||||||||||||||| |||||
Sbjct: 77 atctctccactgtcgtacttggagagcccgatctcgccactgtcatacttggggtggcca 18
Query: 3175 acat 3178
||||
Sbjct: 17 acat 14
>gb|BM816138.1|BM816138 HC109B12_T3.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC109B12_T3.ab1 similar to (AF200528) cellulose
synthase-4 [Zea mays],(AF200529) cellulose synthase-5
[Zea mays],(AF200533) cellulose synthase-9 [Zea
mays],cellulose synthase catalytic subunit [Arabidopsis
thaliana],unnamed protein product [Arabidopsis
thaliana],, mRNA sequence
Length = 880
Score = 613 bits (309), Expect = e-173
Identities = 648/760 (85%), Gaps = 1/760 (0%)
Strand = Plus / Minus
Query: 374 cccacagcaaggagaagatcgacgccagcaggatcgcccagacaaccacgatggtcgggg 433
||||||||||||||||||| || ||||| |||| |||||||| | || || ||||| |
Sbjct: 812 cccacagcaaggagaagattgaagccaggaggacagcccagacgatgacaatcgtcggtg 753
Query: 434 tgcggttctgccgacccatgagacccttgaggaacgggtacaggtgaacgatcacccaga 493
||||||| ||| ||||| |||||||||||||| ||||| | |||||| ||||||||||
Sbjct: 752 tgcggttttgcntgcccataagacccttgaggaaggggtataagtgaacaatcacccaga 693
Query: 494 aggcgaagaagagcttgccgaagagcggaccccacgactggtacccgctgttgatggcgt 553
|||| ||||||||||| ||||||||||| ||||| || ||||| || |||||||||||||
Sbjct: 692 aggcaaagaagagcttcccgaagagcggcccccaagattggtaaccactgttgatggcgt 633
Query: 554 aggagatgccggcaacaacgccgaccaggttgatgatcaggatggtggtgggcgggatca 613
||||| | || ||||| || ||||||| ||| ||||||| |||||| || || ||||| |
Sbjct: 632 aggaggtaccagcaacgacaccgaccatgttaatgatcaagatggtcgtcggagggatga 573
Query: 614 gaagtgtcgtccacttgaacatgtacagctccgcgaagtcgccgtcttcatccgaggcct 673
|||| |||||||||||||||||||| ||||| || |||||||| ||||| || ||||
Sbjct: 572 gaagcgtcgtccacttgaacatgtagagctcagcaaagtcgccttcttcgtcattagcct 513
Query: 674 tggaggtgacggtgaagttggtgtcgatgccggcaagcaccttgaggaggccctggaaga 733
| |||||||| ||||||||||||||||| |||||||||||||| || || ||||| ||||
Sbjct: 512 ttgaggtgacagtgaagttggtgtcgataccggcaagcaccttcagaagaccctgaaaga 453
Query: 734 cggcgaagaggtgggcggagatgcctccgatgacccagaactgctcgttcctccaccact 793
|||| || || ||||| ||||| ||||| |||||||||||||| || |||||||||||||
Sbjct: 452 cggcaaacagatgggcagagatacctccaatgacccagaactgttcattcctccaccact 393
Query: 794 cgtcgatgcccacgccgctccacctcatctccaggatacccgtggcgaagatcgagatga 853
|||| ||||| || || |||||||||||||| |||||||| ||||| || || || | ||
Sbjct: 392 cgtcaatgccaacaccactccacctcatctcaaggataccggtggcaaaaattgaaagga 333
Query: 854 agagagagatgaaccagatactagcgaagttgctgatctctgggatgatgaacttccccg 913
|||||| |||||||||||||| || |||||||| |||||||| ||||||||||| || |
Sbjct: 332 agagagcaatgaaccagatactggccaagttgctaatctctggcatgatgaactttccag 273
Query: 914 tgagcaggcagatggcaggcaggatacagtaaatgaggagcgggagggacgtgagcgggt 973
|||||| ||||| ||||||| ||||| || | || |||||||| ||||| || ||||
Sbjct: 272 tgagcaaacagatagcaggcaatatacaatagactagaagcgggagagacgttagtgggt 213
Query: 974 agatggtggtgttgatgtaggcgaatctctccaagaacttcaggcgtcctccgtagccgt 1033
| ||||||||||||||||| ||||||||||||| |||||| ||||| ||||||||||| |
Sbjct: 212 aaatggtggtgttgatgtaagcgaatctctccaggaacttgaggcgccctccgtagccat 153
Query: 1034 accatagggggcaatgccggctgaaaaggatttccactgaaccgagagcccaccggagca 1093
|||||| ||||||||||||||||||||| ||||| || ||||| ||||||||||||||||
Sbjct: 152 accataaggggcaatgccggctgaaaagaatttcaacggaaccaagagcccaccggagca 93
Query: 1094 cctggttcagacggtctgagagattgatgggagccgatcc 1133
|||||||||||| ||||| ||||||||||| || |||||
Sbjct: 92 -ctggttcagacgatctgaaagattgatgggggcagatcc 54
>gb|AW982533.3|AW982533 HVSMEg0003I09f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0003I09f, mRNA sequence
Length = 854
Score = 599 bits (302), Expect = e-169
Identities = 489/550 (88%), Gaps = 1/550 (0%)
Strand = Plus / Minus
Query: 1945 tggaatccaggacgtttttcacgagaaacatagaccaaacggggtagctcattaccctca 2004
|||||||||||||||||| | ||||| |||||| |||| |||| ||||||||||| ||
Sbjct: 549 tggaatccaggacgttttcc-cgagacacatagcccaacggggggagctcattaccttcg 491
Query: 2005 gtatcaagaccaccactgtgaccaaggaaaacctgaatcattccaggatggtccctggta 2064
|||||||| ||||| ||| |||||||||||||||||||||||||| || ||| |||||
Sbjct: 490 gtatcaaggccaccctggtgcccaaggaaaacctgaatcattccagggtgatccttggta 431
Query: 2065 ttgtttcctggccatggtgtgccatcttgcatgatccatccttcctcagggactttttgt 2124
|||||||||||||||||||||||||||||||||||||||| |||||| |||||||| |
Sbjct: 430 ttgtttcctggccatggtgtgccatcttgcatgatccatctttcctcggggactttcaat 371
Query: 2125 gccttagcaacaaggccatttaccctaattttgaattcttcatattctctcttcatggcc 2184
||||||| ||| |||||||||| ||||||||| |||||||||||||||||||||||||||
Sbjct: 370 gccttagaaactaggccatttatcctaattttaaattcttcatattctctcttcatggcc 311
Query: 2185 cggcggtctttaacaaatgaagggtgcactttgtccttcaagtaatcaattttctgggag 2244
||||||||||||||||||||||| || |||||||| |||||||||||||||||||| |||
Sbjct: 310 cggcggtctttaacaaatgaaggctggactttgtctttcaagtaatcaattttctgagag 251
Query: 2245 aagtaccattcaggagctctaggttcaatgttgtacttcttaacaaatggcacccatttt 2304
|||||||| ||||||||||| ||||| |||| ||||||||||||||||| ||||| ||
Sbjct: 250 aagtaccactcaggagctctgggttcgatgtcatacttcttaacaaatggtacccacttc 191
Query: 2305 ctagcaaactctgaagtctcagctagtgcatcaaatgtcagcatagcagctccatcatca 2364
||||||||||||||||||||||| | ||| ||||| || ||||| | ||||| ||||||
Sbjct: 190 ctagcaaactctgaagtctcagccaatgcgtcaaaagtgagcattgatgctccgtcatca 131
Query: 2365 gatacatagcaagagaccttatccacaggatagtccacagcgagaatggatagcacggta 2424
|||||||||||||||||||| ||||| ||||| || ||||| |||||||||||||||||
Sbjct: 130 gatacatagcaagagaccttgtccacgggataatcaacagcaagaatggatagcacggtg 71
Query: 2425 ttggcagtgacaagaggaggctccttcattgggtcgacagtactgacaaaaatgtcaaca 2484
||||||||||| | ||| |||||||||| |||||||| |||||||| || |||||||||
Sbjct: 70 ttggcagtgacgataggtggctccttcaaggggtcgactgtactgacgaatatgtcaaca 11
Query: 2485 gcagccaact 2494
||||||||||
Sbjct: 10 gcagccaact 1
>gb|CB883651.1|CB883651 HQ02O03w HQ Hordeum vulgare subsp. vulgare cDNA clone HQ02O03
3-PRIME, mRNA sequence
Length = 601
Score = 595 bits (300), Expect = e-168
Identities = 516/588 (87%)
Strand = Plus / Minus
Query: 2530 agtctatcaaggtaagtctcgcggttgattggaaaccactttggaaactgatccaatatc 2589
|||||||||||||| ||||| |||||||||||||||||||| || |||||||||| ||||
Sbjct: 595 agtctatcaaggtaggtctcccggttgattggaaaccacttcgggaactgatccagtatc 536
Query: 2590 caggaaagagcaaaccagatctcacatataacagatagaagccacagtgggtatgcatta 2649
||||| | ||||||||| ||||||||||||||||||| ||||||||| ||||||||||||
Sbjct: 535 caggataaagcaaaccaaatctcacatataacagataaaagccacagcgggtatgcatta 476
Query: 2650 cgcacaggatttgtgatccggtagtgcaagaagatgcttagaacaatcaatcgtagcaca 2709
|||||||||||||||| |||||||||| ||||||||||||||||| ||| || || |||
Sbjct: 475 cgcacaggatttgtgagacggtagtgcaggaagatgcttagaacaaccaaccgcagaaca 416
Query: 2710 atgaccatcctgtatggatttatcctggaggaaggaagtggaactttcctagatagaggc 2769
|||||||| ||||| |||||||| |||| |||| || || || || ||||||||||||
Sbjct: 415 atgaccattctgtacggatttattttggatgaagcaatggggacctttctagatagaggc 356
Query: 2770 tggcgagtttcatcgtttaataaggcatcttccatgttgtaatcagttgatgcatcaata 2829
|||||||||||||| || | ||| || |||||||||||||| ||||| |||||||| ||
Sbjct: 355 tggcgagtttcatcattcagtaaagcgtcttccatgttgtattcagtagatgcatcgatg 296
Query: 2830 tcaccaacaccccggccctcagagggagcaatgcttgtgccattcgtcatgggaattgtt 2889
||| | | |||| || |||||||||||||||||||||||||| |||||||||||||
Sbjct: 295 tcagtagctgcccgaccttcagagggagcaatgcttgtgccattagtcatgggaattgca 236
Query: 2890 cccttgtcctgcttcattttccagccatcaaccctctctttccaggcaacattcccaacg 2949
|||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 235 cccttgtcctgcttcattttccagccatcaactctctctttccaagcaacattcccaata 176
Query: 2950 ctaccagagaattccctcgacggatttgatgaatgattcatatagggaaatggggcgcgc 3009
|| |||||||| ||||| |||||||||| ||||||||||| ||||| || || || ||
Sbjct: 175 ctgccagagaactcccttgacggatttggtgaatgattcacgtaggggaacggagcacgt 116
Query: 3010 ctgccaatgttcccagtaggagacatcatatgatggtcaggggaagcaccagggatttct 3069
|||| |||||||||||||| |||||||||||||| ||||||||||| ||||||||||||
Sbjct: 115 ctgctgatgttcccagtaggggacatcatatgatgatcaggggaagctccagggatttct 56
Query: 3070 cccgaaatctggctgttagtgactgacgggatgtatccccgagggatc 3117
|| || |||||||||||||||||||| |||| |||||||| |||||||
Sbjct: 55 cctgacatctggctgttagtgactgaagggacgtatcccctagggatc 8
>gb|BU995821.1|BU995821 HM11H13r HM Hordeum vulgare subsp. vulgare cDNA clone HM11H13
5-PRIME, mRNA sequence
Length = 591
Score = 593 bits (299), Expect = e-167
Identities = 512/581 (88%), Gaps = 4/581 (0%)
Strand = Plus / Minus
Query: 1078 agagcccaccggagcacctggttcagacggtctgagagattgatgggagccgatcccttg 1137
||||||||||||||||| ||||||||||| ||||| ||||||||||| || |||||||||
Sbjct: 590 agagcccaccggagcacttggttcagacgatctgaaagattgatgggggcagatcccttg 531
Query: 1138 aaggccggccgcttaggcatgcagtagatcgaccgccagcctcgtgcgtgcatcttgaac 1197
|| || || |||||||||||||| |||| ||||||||||||| |||||||||||||||
Sbjct: 530 aaagctgggcgcttaggcatgcaatagactgaccgccagcctcttgcgtgcatcttgaat 471
Query: 1198 ccagtgagaatatcttccgtcacagaaccatagatccacccaatctcagttccccattca 1257
||||||||||||||||| || ||||| ||||| ||||| ||||||||||||||||| |||
Sbjct: 470 ccagtgagaatatcttctgtgacagatccataaatccaaccaatctcagttccccactca 411
Query: 1258 atcttgtcctcgtagccacaacttatgacatggatagcttctttcagaagagattccgga 1317
||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||
Sbjct: 410 gacttgtcctcatagccacaacttatgacatggatagcttctttcaaaagagattctgga 351
Query: 1318 gtcgcagactgaggaacaccaccatattccatcagagtggacgcaacaaaagctgcagat 1377
|| | ||||||||||||||||||||||||||||||||||| |||||||| ||||| ||
Sbjct: 350 gtggaggactgaggaacaccaccatattccatcagagtggaggcaacaaatgctgctgac 291
Query: 1378 tggccaaatctcttctccaagctcatttgagacataagaagtgatttctcatcatcaaat 1437
||||||||||||||||| ||||||||||||||||| |||| ||||||||||||||||||
Sbjct: 290 tggccaaatctcttctctaagctcatttgagacatgagaactgatttctcatcatcaaac 231
Query: 1438 ccagcgccttcaactccctcctctatatcttcaagattgaatactggcacagaactgtcc 1497
||||| |||||||| ||||||||||| |||||||||||||| ||||| |||||||||||
Sbjct: 230 ccagcaccttcaacaccctcctctatgtcttcaagattgaacactggaacagaactgtcg 171
Query: 1498 acatgcttctgtgactttttcttgtctgagccc---ttctttgatttgcttcccttcttc 1554
|||||||| | |||||||||||| ||||||| | |||||||| |||||| ||||||||
Sbjct: 170 acatgcttgtttgactttttcttatctgagctccttttctttgacttgcttgccttcttc 111
Query: 1555 ctgccaccacatagtgatgacaagaaaccacccttcttttgcttaattgggggctcataa 1614
|||| ||||| ||||||| |||||||| |||||| |||||| ||||| ||||||
Sbjct: 110 ttgcccccacacagtgatgccaagaaacttggcttcttcgccttaatcgggggttcataa 51
Query: 1615 ccatatagagctgttctgttgaaaacacagccagtgcccac 1655
||||| | ||| |||||||| |||||||| ||||| |||||
Sbjct: 50 ccatagatagccgttctgtt-aaaacacaaccagttcccac 11
>gb|BU999035.1|BU999035 HI12P13r HI Hordeum vulgare subsp. vulgare cDNA clone HI12P13
5-PRIME, mRNA sequence
Length = 656
Score = 591 bits (298), Expect = e-167
Identities = 542/622 (87%), Gaps = 1/622 (0%)
Strand = Plus / Minus
Query: 1784 tccttcctaggttaggatccataaggaagcacatagcttccctgagagccttactgttgt 1843
|||||||||| ||||| |||||||| ||||||||||| || || ||||| | || ||||
Sbjct: 634 tccttcctagattagggtccataagaaagcacatagcctctcttagagcgctgctattgt 575
Query: 1844 tgatgtagtgatcacaatcaagattcaacatgtattgtccattggtaagcacagctgaga 1903
|||||||||||||||||||||||||||||||||| || ||||| ||||| |||||||| |
Sbjct: 574 tgatgtagtgatcacaatcaagattcaacatgtactgcccattagtaaggacagctgata 515
Query: 1904 cgcggacaagagcattcatggcaccagctttcttgtgatgctggaatccaggacgttttt 1963
| || ||||| |||||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 514 cacgaacaagtgcattcatggcaccagctttcttgtggtgctggaatccaggacgtttct 455
Query: 1964 cacgagaaacatagaccaaacggggtagctcattaccctcagtatcaagaccaccactgt 2023
||||||| ||||| |||||||| || |||||||| || |||||||| || || ||||| |
Sbjct: 454 cacgagacacataaaccaaacgaggaagctcattgccatcagtatcgaggcctccactat 395
Query: 2024 gaccaaggaaaacctgaatcattccaggatggtccctggtattgtttcctggccatggtg 2083
|||||||||||||||||| |||||||||||||||||| |||||||| || ||||| ||||
Sbjct: 394 gaccaaggaaaacctgaagcattccaggatggtccctagtattgttcccaggccaaggtg 335
Query: 2084 tgccatcttgcatgatccatccttcctcagggactttttgtgccttagcaacaaggccat 2143
|||| |||||||||||||||||||||||||| ||||| | || || || ||||||| ||
Sbjct: 334 tgccgtcttgcatgatccatccttcctcaggaactttctcggctttggctacaaggctat 275
Query: 2144 ttaccctaattttgaattcttcatattctctcttcatggcccggcggtctttaacaaatg 2203
| || | || |||||| ||||||||||||||||||||||| || ||||||||||| ||||
Sbjct: 274 taacgcgaactttgaactcttcatattctctcttcatggctcgacggtctttaacgaatg 215
Query: 2204 aagggtgcactttgtccttcaagtaatcaattttctgggagaagtaccattcaggagctc 2263
||| || |||||||| |||||| ||||||||||||| | |||||||| || || ||||
Sbjct: 214 aagtctgaactttgtctttcaagaaatcaattttctgagcaaagtaccactctggtgctc 155
Query: 2264 taggttcaatgttgtacttcttaacaaatggcacccattttctagcaaactctgaagtct 2323
| ||||| ||||| ||||| ||| ||| || ||||||||||||||||||||||||||||
Sbjct: 154 tgggttctatgttatactttttacaaaacggtacccattttctagcaaactctgaagtct 95
Query: 2324 cagctagtgcatcaaatgtcagcatagcagctccatcatcagatacatagcaagagacct 2383
|||| ||||||||||| || ||||| ||||||||||||||||||||||||||||| | ||
Sbjct: 94 cagcaagtgcatcaaaggtaagcatcgcagctccatcatcagatacatagcaagata-ct 36
Query: 2384 tatccacaggatagtccacagc 2405
| || ||||| |||||||||||
Sbjct: 35 tgtcaacagggtagtccacagc 14
>gb|CV061189.1|CV061189 BNEL65h6 Barley EST endosperm library Hordeum vulgare subsp. vulgare
cDNA clone BNEL65h6 5' similar to putative cellulose
synthase, mRNA sequence
Length = 590
Score = 591 bits (298), Expect = e-167
Identities = 517/590 (87%)
Strand = Plus / Minus
Query: 819 catctccaggatacccgtggcgaagatcgagatgaagagagagatgaaccagatactagc 878
|||||| |||||||| ||||| || || || | |||||||| |||||||||||||| ||
Sbjct: 590 catctcaaggataccggtggcaaaaattgaaaggaagagagcaatgaaccagatactggc 531
Query: 879 gaagttgctgatctctgggatgatgaacttccccgtgagcaggcagatggcaggcaggat 938
|||||||| |||||||| ||||||||||| || |||||||| ||||| ||||||| ||
Sbjct: 530 caagttgctaatctctggcatgatgaactttccagtgagcagacagatagcaggcaatat 471
Query: 939 acagtaaatgaggagcgggagggacgtgagcgggtagatggtggtgttgatgtaggcgaa 998
||| || | || |||||||| ||||| || ||||| ||||||||||||||||| |||||
Sbjct: 470 acaatagactagaagcgggagagacgttagtgggtaaatggtggtgttgatgtaagcgaa 411
Query: 999 tctctccaagaacttcaggcgtcctccgtagccgtaccatagggggcaatgccggctgaa 1058
|||||||| |||||| ||||| ||||||||||| ||||||| ||||||||||||||||||
Sbjct: 410 tctctccaggaacttgaggcgccctccgtagccataccataaggggcaatgccggctgaa 351
Query: 1059 aaggatttccactgaaccgagagcccaccggagcacctggttcagacggtctgagagatt 1118
||| ||||| ||||| ||||||||||||||||| ||||||||||| ||||| |||||
Sbjct: 350 aagaatttcacgggaaccaagagcccaccggagcacttggttcagacgatctgaaagatt 291
Query: 1119 gatgggagccgatcccttgaaggccggccgcttaggcatgcagtagatcgaccgccagcc 1178
|||||| || ||||||||||| || || |||||||||||||| |||| |||||||||||
Sbjct: 290 gatgggggcagatcccttgaaagctgggcgcttaggcatgcaatagactgaccgccagcc 231
Query: 1179 tcgtgcgtgcatcttgaacccagtgagaatatcttccgtcacagaaccatagatccaccc 1238
|| ||||||||||||||| ||||||||||||||||| || ||||| ||||| ||||| ||
Sbjct: 230 tcttgcgtgcatcttgaatccagtgagaatatcttctgtgacagatccataaatccaacc 171
Query: 1239 aatctcagttccccattcaatcttgtcctcgtagccacaacttatgacatggatagcttc 1298
||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 170 aatctcagttccccactcagacttgtcctcatagccacaacttatgacatggatagcttc 111
Query: 1299 tttcagaagagattccggagtcgcagactgaggaacaccaccatattccatcagagtgga 1358
||||| ||||||||| ||||| | |||||||| ||||||||||||||||||||||||||
Sbjct: 110 tttcaaaagagattctggagtggaggactgagggacaccaccatattccatcagagtgga 51
Query: 1359 cgcaacaaaagctgcagattggccaaatctcttctccaagctcatttgag 1408
|||||||| ||||| || ||||||||||||||||| |||||||||||||
Sbjct: 50 ggcaacaaatgctgctgactggccaaatctcttctctaagctcatttgag 1
>gb|CA009062.1|CA009062 HU13B03r HU Hordeum vulgare subsp. vulgare cDNA clone HU13B03
5-PRIME, mRNA sequence
Length = 588
Score = 587 bits (296), Expect = e-165
Identities = 507/577 (87%), Gaps = 3/577 (0%)
Strand = Plus / Minus
Query: 1397 agctcatttgagacataagaagtgatttctcatcatcaaatccagcgccttcaactccct 1456
|||||||||||||||| |||| |||||||||||||||||| |||| |||||||| ||||
Sbjct: 588 agctcatttgagacatgagaactgatttctcatcatcaaacncagcaccttcaacaccct 529
Query: 1457 cctctatatcttcaagattgaatactggcacagaactgtccacatgcttctgtgactttt 1516
||||||| |||||||||||||| ||||| ||||||||||| |||||||| | ||||||||
Sbjct: 528 cctctatgtcttcaagattgaacactggaacagaactgtcgacatgcttgtttgactttt 469
Query: 1517 tcttgtctgagccc---ttctttgatttgcttcccttcttcctgccaccacatagtgatg 1573
|||| ||||||| | |||||||| |||||| |||||||| |||| ||||| |||||||
Sbjct: 468 tcttatctgagctccttttctttgacttgcttgccttcttcttgcccccacacagtgatg 409
Query: 1574 acaagaaaccacccttcttttgcttaattgggggctcataaccatatagagctgttctgt 1633
|||||||| |||||| |||||| ||||| ||||||||||| | ||| |||||||
Sbjct: 408 ccaagaaacttggcttcttcgccttaatcgggggttcataaccatagatagccgttctgt 349
Query: 1634 tgaaaacacagccagtgcccacataaactggtccttggatgccatcaagacctctcaagt 1693
|||||||||| ||||| |||||||||||||| ||||| ||||||||||| || |||||||
Sbjct: 348 tgaaaacacaaccagttcccacataaactggcccttgaatgccatcaaggcccctcaagt 289
Query: 1694 taatatcgaaaaacacggtgttcctgttggcatatcgatcattcctatcaataccatcga 1753
||||||| ||||| || ||||||||||| ||||||||||||||||||||||||||||| |
Sbjct: 288 taatatcaaaaaagacagtgttcctgttcgcatatcgatcattcctatcaataccatcaa 229
Query: 1754 acctctggggaaactgaacatagcagacactccttcctaggttaggatccataaggaagc 1813
||||||| || ||||| ||||| ||||| | |||||||| |||||||| |||||||
Sbjct: 228 acctctgtgggaactgcacataacagacttgcggacctaggtttggatccattaggaagc 169
Query: 1814 acatagcttccctgagagccttactgttgttgatgtagtgatcacaatcaagattcaaca 1873
|||||||||||| || |||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 168 acatagcttcccggacagccttgctgttgttgatgtagtgatcacaatcaagattcaaca 109
Query: 1874 tgtattgtccattggtaagcacagctgagacgcggacaagagcattcatggcaccagctt 1933
||||||||||||| ||||| ||||| ||||| || ||||| ||||||||||||||||| |
Sbjct: 108 tgtattgtccattagtaaggacagccgagacacgaacaagggcattcatggcaccagcct 49
Query: 1934 tcttgtgatgctggaatccaggacgtttttcacgaga 1970
||||||| ||||||||||||||||| |||||||||||
Sbjct: 48 tcttgtggtgctggaatccaggacgcttttcacgaga 12
>gb|BF255020.3|BF255020 HVSMEf0005K21f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0005K21f, mRNA sequence
Length = 594
Score = 575 bits (290), Expect = e-162
Identities = 517/588 (87%), Gaps = 6/588 (1%)
Strand = Plus / Minus
Query: 970 gggtagatggtggtgttgatgtaggcgaatctctccaagaacttcaggcgtcctccgtag 1029
||||| ||||||||||||||||| ||||||||||||| |||||| | ||| |||||||||
Sbjct: 587 gggtaaatggtggtgttgatgtaagcgaatctctccaggaacttgaagcgccctccgtag 528
Query: 1030 ccgtaccatagggggcaatgccggctgaaaaggatttccactgaaccgagagcccaccgg 1089
| |||||| ||||||||||||||||||||| ||||| || ||||| ||||||| ||||
Sbjct: 527 caa-accataaggggcaatgccggctgaaaagaatttcaacggaaccaagagccccccgg 469
Query: 1090 agcacctggttcagacggtctgagagattgatgggagccgatcccttgaaggccggccgc 1149
||||| ||||||| || ||||| ||||||||||| || ||||||||||| || || |||
Sbjct: 468 agcacttggttcaagcgatctgaaagattgatgggggcagatcccttgaaagctgggcgc 409
Query: 1150 tt-aggcatgcagtagatcgaccgccagcctcgtgcgtgcat-cttgaacccagtgagaa 1207
|| ||||||||| |||| ||||||||||||| ||||||||| |||||| ||||||||||
Sbjct: 408 tttaggcatgcaatagactgaccgccagcctcttgcgtgcattcttgaatccagtgagaa 349
Query: 1208 tatcttccgtcacagaaccatagatccacccaatctcagttccccattcaatcttgtcct 1267
||||||| || ||||| ||||| ||||| ||||||||||||||||| ||| ||||||||
Sbjct: 348 tatcttctgtgacagatccataaatccaaccaatctcagttccccactcagacttgtcct 289
Query: 1268 cgtagccacaacttatgacatggatagcttctttcagaagagattccggagtcgcagact 1327
| |||||||||||||||||||||||||||||||||| ||||||||| ||||| | ||||
Sbjct: 288 catagccacaacttatgacatggatagcttctttcaaaagagattctggagtggaggact 229
Query: 1328 gaggaacaccaccatattccatcagagtggacgcaacaaaagctgcagattggccaaatc 1387
||||||||||||||||||||||||||||||| |||||||| ||||| || ||||||||||
Sbjct: 228 gaggaacaccaccatattccatcagagtggaggcaacaaatgctgctgactggccaaatc 169
Query: 1388 tcttctccaagctcatttgagacataagaagtgatttctcatcatcaaatccagcgcctt 1447
| ||||| ||||||||||||||||| |||| |||||||||||||||||| ||||| ||||
Sbjct: 168 ttttctctaagctcatttgagacatgagaactgatttctcatcatcaaacccagcacctt 109
Query: 1448 caactccctcctctatatcttcaagattgaatactggcacagaactgtccacatgcttct 1507
|||| ||||||||||| |||||||||||||| ||||| ||||||||||| |||||||| |
Sbjct: 108 caacaccctcctctatgtcttcaagattgaacactggaacagaactgtcgacatgcttgt 49
Query: 1508 gtgactttttcttgtctgagccc---ttctttgatttgcttcccttct 1552
|||||||||||| | ||||| | |||||||| |||||| ||||||
Sbjct: 48 ttgactttttcttatatgagctccttttctttgacttgcttgccttct 1
>gb|AV932043.1|AV932043 AV932043 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal2a04 5', mRNA sequence
Length = 615
Score = 573 bits (289), Expect = e-161
Identities = 514/589 (87%)
Strand = Plus / Minus
Query: 724 ccctggaagacggcgaagaggtgggcggagatgcctccgatgacccagaactgctcgttc 783
||||| |||||||| || || ||||| ||||| ||||| |||||||||||||| || |||
Sbjct: 603 ccctgaaagacggcaaacagatgggcagagatacctccaatgacccagaactgttcattc 544
Query: 784 ctccaccactcgtcgatgcccacgccgctccacctcatctccaggatacccgtggcgaag 843
|||||||||||||| ||||| || || |||||||||||||| |||||||| ||||| ||
Sbjct: 543 ctccaccactcgtcaatgccaacaccactccacctcatctcaaggataccggtggcaaaa 484
Query: 844 atcgagatgaagagagagatgaaccagatactagcgaagttgctgatctctgggatgatg 903
|| || | |||||||| |||||||||||||| || |||||||| |||||||| ||||||
Sbjct: 483 attgaaaggaagagagcaatgaaccagatactggccaagttgctaatctctggcatgatg 424
Query: 904 aacttccccgtgagcaggcagatggcaggcaggatacagtaaatgaggagcgggagggac 963
||||| || ||||||| ||||| ||||||| ||||| || | || |||||||| |||
Sbjct: 423 aactttccagtgagcaaacagatagcaggcaatatacaatagactagaagcgggagagac 364
Query: 964 gtgagcgggtagatggtggtgttgatgtaggcgaatctctccaagaacttcaggcgtcct 1023
|| || ||||| ||||||||||||||||| ||||||||||||| |||||| ||||| |||
Sbjct: 363 gttagtgggtaaatggtggtgttgatgtaagcgaatctctccaggaacttgaggcgccct 304
Query: 1024 ccgtagccgtaccatagggggcaatgccggctgaaaaggatttccactgaaccgagagcc 1083
|||||||| ||||||| ||||||||||||||||||||| ||||| || ||||| ||||||
Sbjct: 303 ccgtagccataccataaggggcaatgccggctgaaaagaatttcaacggaaccaagagcc 244
Query: 1084 caccggagcacctggttcagacggtctgagagattgatgggagccgatcccttgaaggcc 1143
||||||||||| ||||||||||| ||||| ||||||||||| || ||||||||||| ||
Sbjct: 243 caccggagcacttggttcagacgatctgaaagattgatgggggcagatcccttgaaagct 184
Query: 1144 ggccgcttaggcatgcagtagatcgaccgccagcctcgtgcgtgcatcttgaacccagtg 1203
|| |||||||||||||| |||| ||||||||||||| ||||||||||||||| ||||||
Sbjct: 183 gggcgcttaggcatgcaatagactgaccgccagcctcttgcgtgcatcttgaatccagtg 124
Query: 1204 agaatatcttccgtcacagaaccatagatccacccaatctcagttccccattcaatcttg 1263
||||||||||| || ||||| ||||| ||||| ||||||||||||||||| ||| ||||
Sbjct: 123 agaatatcttctgtgacagatccataaatccaaccaatctcagttccccactcagacttg 64
Query: 1264 tcctcgtagccacaacttatgacatggatagcttctttcagaagagatt 1312
||||| |||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 63 tcctcatagccacaacttatgacatggatagcttctttcaaaagagatt 15
>gb|CA019265.1|CA019265 HV11G20r HV Hordeum vulgare subsp. vulgare cDNA clone HV11G20
5-PRIME, mRNA sequence
Length = 579
Score = 563 bits (284), Expect = e-158
Identities = 494/564 (87%)
Strand = Plus / Minus
Query: 2586 tatccaggaaagagcaaaccagatctcacatataacagatagaagccacagtgggtatgc 2645
||||||||| | ||||||||| ||||||||||||||||||| ||||||||| ||||||||
Sbjct: 575 tatccaggataaagcaaaccaaatctcacatataacagataaaagccacagcgggtatgc 516
Query: 2646 attacgcacaggatttgtgatccggtagtgcaagaagatgcttagaacaatcaatcgtag 2705
|||||||||||||||||||| |||||||||| ||||||||||||||||| ||| || ||
Sbjct: 515 attacgcacaggatttgtgagacggtagtgcaggaagatgcttagaacaaccaaccgcag 456
Query: 2706 cacaatgaccatcctgtatggatttatcctggaggaaggaagtggaactttcctagatag 2765
||||||||||| ||||| |||||||| |||| |||| || || || || ||||||||
Sbjct: 455 aacaatgaccattctgtacggatttattttggatgaagcaatggggacctttctagatag 396
Query: 2766 aggctggcgagtttcatcgtttaataaggcatcttccatgttgtaatcagttgatgcatc 2825
|||||||||||||||||| || | ||| || |||||||||||||| ||||| ||||||||
Sbjct: 395 aggctggcgagtttcatcattcagtaaagcgtcttccatgttgtattcagtagatgcatc 336
Query: 2826 aatatcaccaacaccccggccctcagagggagcaatgcttgtgccattcgtcatgggaat 2885
|| ||| | | |||| || |||||||||||||||||||||||||| |||||||||||
Sbjct: 335 gatgtcagtagctgcccgaccttcagagggagcaatgcttgtgccattagtcatgggaat 276
Query: 2886 tgttcccttgtcctgcttcattttccagccatcaaccctctctttccaggcaacattccc 2945
|| |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 275 tgcacccttgtcctgcttcattttccagccatcaactctctctttccaagcaacattccc 216
Query: 2946 aacgctaccagagaattccctcgacggatttgatgaatgattcatatagggaaatggggc 3005
|| || |||||||| ||||| |||||||||| ||||||||||| ||||| || || ||
Sbjct: 215 aatactgccagagaactcccttgacggatttggtgaatgattcacgtaggggaacggagc 156
Query: 3006 gcgcctgccaatgttcccagtaggagacatcatatgatggtcaggggaagcaccagggat 3065
|| |||| |||||||||||||| |||||||||||||| ||||||||||| ||||||||
Sbjct: 155 acgtctgctgatgttcccagtaggggacatcatatgatgatcaggggaagctccagggat 96
Query: 3066 ttctcccgaaatctggctgttagtgactgacgggatgtatccccgagggatctcaccact 3125
|||||| || |||||||||||||||||||| |||| |||||||| ||||||||| |||||
Sbjct: 95 ttctcctgacatctggctgttagtgactgaagggacgtatcccctagggatctctccact 36
Query: 3126 gtcgtacttggtaagcccgatctc 3149
||||||||||| |||||||||||
Sbjct: 35 gtcgtacttggagagcccgatctc 12
>gb|BQ471393.1|BQ471393 HV02E21r HV Hordeum vulgare subsp. vulgare cDNA clone HV02E21
5-PRIME, mRNA sequence
Length = 553
Score = 539 bits (272), Expect = e-151
Identities = 473/540 (87%)
Strand = Plus / Minus
Query: 2639 ggtatgcattacgcacaggatttgtgatccggtagtgcaagaagatgcttagaacaatca 2698
||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| ||
Sbjct: 553 ggtatgcattacgcacaggatttgtgagacggtagtgcaggaagatgcttagaacaacca 494
Query: 2699 atcgtagcacaatgaccatcctgtatggatttatcctggaggaaggaagtggaactttcc 2758
| || || ||||||||||| ||||| |||||||| |||| |||| || || || || |
Sbjct: 493 accgcagaacaatgaccattctgtacggatttattttggatgaagcaatggggacctttc 434
Query: 2759 tagatagaggctggcgagtttcatcgtttaataaggcatcttccatgttgtaatcagttg 2818
||||||||||||||||||||||||| || | ||| || |||||||||||||| ||||| |
Sbjct: 433 tagatagaggctggcgagtttcatcattcagtaaagcgtcttccatgttgtattcagtag 374
Query: 2819 atgcatcaatatcaccaacaccccggccctcagagggagcaatgcttgtgccattcgtca 2878
||||||| || ||| | | |||| || |||||||||||||||||||||||||| ||||
Sbjct: 373 atgcatcgatgtcagtagctgcccgaccttcagagggagcaatgcttgtgccattagtca 314
Query: 2879 tgggaattgttcccttgtcctgcttcattttccagccatcaaccctctctttccaggcaa 2938
||||||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 313 tgggaattgcacccttgtcctgcttcattttccagccatcaactctctctttccaagcaa 254
Query: 2939 cattcccaacgctaccagagaattccctcgacggatttgatgaatgattcatatagggaa 2998
||||||||| || |||||||| ||||| |||||||||| ||||||||||| ||||| |
Sbjct: 253 cattcccaatactgccagagaactcccttgacggatttggtgaatgattcacgtagggga 194
Query: 2999 atggggcgcgcctgccaatgttcccagtaggagacatcatatgatggtcaggggaagcac 3058
| || || || |||| |||||||||||||| |||||||||||||| ||||||||||| |
Sbjct: 193 acggagcacgtctgctgatgttcccagtaggggacatcatatgatgatcaggggaagctc 134
Query: 3059 cagggatttctcccgaaatctggctgttagtgactgacgggatgtatccccgagggatct 3118
||||||||||||| || |||||||||||||||||||| |||| |||||||| ||||||||
Sbjct: 133 cagggatttctcctgacatctggctgttagtgactgaagggacgtatcccctagggatct 74
Query: 3119 caccactgtcgtacttggtaagcccgatctcaccactgtcatacttggggcggccaacat 3178
| |||||||||||||||| ||||||||||| |||||||||||||||||| |||||||||
Sbjct: 73 ctccactgtcgtacttggagagcccgatctcgccactgtcatacttggggtggccaacat 14
>gb|CA031458.1|CA031458 HX10A06r HX Hordeum vulgare subsp. vulgare cDNA clone HX10A06
5-PRIME, mRNA sequence
Length = 627
Score = 533 bits (269), Expect = e-149
Identities = 535/623 (85%), Gaps = 3/623 (0%)
Strand = Plus / Minus
Query: 2344 agcatagcagctccatcatcagatacatagcaagagaccttatccacaggatagtccaca 2403
||||| ||||||||||||||||||||||||||||| || || || ||||| |||||||||
Sbjct: 620 agcatcgcagctccatcatcagatacatagcaagatactttgtcaacagggtagtccaca 561
Query: 2404 gcgagaatggatagcacggtattggcagtgacaagaggaggctccttcattgggtcgaca 2463
|| || || || ||||| ||||| |||||||| ||||||||||||||||| || || |||
Sbjct: 560 gcaaggatagaaagcacagtatttgcagtgacgagaggaggctccttcataggatccaca 501
Query: 2464 gtactgacaaaaatgtcaacagcagccaactgagatggctcaccttcccggtcatacctt 2523
|||||||||||||||||||||| |||||||||||| |||||| |||||||||||||||
Sbjct: 500 gtactgacaaaaatgtcaacaggagccaactgagacaactcaccatcccggtcatacctt 441
Query: 2524 aatgcgagtctatcaaggtaagtctcgcggttgattggaaaccactttggaaactgatcc 2583
|| || || || ||||||||||| || || || | |||| ||||||| || |||||||||
Sbjct: 440 aaagccagcctgtcaaggtaagtttcacgattcactggagaccacttggggaactgatcc 381
Query: 2584 aatatccaggaaagagcaaaccagatctcacatataacagatagaagccacagtgggtat 2643
|| |||||||||| ||||||||| ||||||||||| || ||||| ||||| ||||| |||
Sbjct: 380 aaaatccaggaaaaagcaaaccaaatctcacatatcaccgatagcagccaaagtggatat 321
Query: 2644 gcattacgcacaggatttgtgatccggtagtgcaagaagatgcttagaacaatcaatcgt 2703
|||||||| ||||| |||||||| |||||||||| |||||||| || ||||||||||||
Sbjct: 320 gcattacggacagggtttgtgatacggtagtgcaggaagatgcagaggacaatcaatcgt 261
Query: 2704 agcacaatgaccatcctgtatggatttatcctggaggaaggaagtggaactttcctagat 2763
|||||||||||||| ||||| |||||||| ||||| ||||||| ||| ||||| |||||
Sbjct: 260 agcacaatgaccattctgtagggatttattctggatgaaggaattggcacttttctagag 201
Query: 2764 agaggctggcgagtttcatcgtttaataaggcatcttccatgttgtaatcagttgatgca 2823
||||||||||| |||||||| || | ||||| ||||||||| ||| ||||| |||||
Sbjct: 200 agaggctggcgtgtttcatcattcagtaaggggtcttccatgccgtagtcagtacatgca 141
Query: 2824 tcaatatcaccaacaccccggccctcagagggagcaatgcttgtgccattcgtcatggga 2883
|| ||||||||| || ||||| || || |||||||||||||| ||||| |||||||||
Sbjct: 140 tcgatatcaccatttccacggccttcggaaggagcaatgcttgttccattagtcatggga 81
Query: 2884 attgttcccttgtcctgcttcattttccagccatcaaccctctctttccaggcaacattc 2943
|||| |||||||| |||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 80 attgcacccttgtc---tttcattttccagccatcaactctctctttccacgcaacattg 24
Query: 2944 ccaacgctaccagagaattccct 2966
|||| |||||||||||| |||||
Sbjct: 23 ccaaggctaccagagaactccct 1
>gb|BI951084.1|BI951084 HVSMEl0024F09f Hordeum vulgare spike EST library HVcDNA0012 (Fusarium
infected) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEl0024F09f, mRNA sequence
Length = 900
Score = 507 bits (256), Expect = e-142
Identities = 471/540 (87%), Gaps = 2/540 (0%)
Strand = Plus / Minus
Query: 781 ttcctccaccactcgtcgatgcc-cacgccgctccacctcatctccaggatacccgtggc 839
||||||||| ||||||| ||||| ||| || |||||||||||||| |||||||| |||||
Sbjct: 547 ttcctccacgactcgtcaatgccacac-ccactccacctcatctcaaggataccggtggc 489
Query: 840 gaagatcgagatgaagagagagatgaaccagatactagcgaagttgctgatctctgggat 899
|| || || | |||||||| |||| ||||||||| || |||||| | |||||||| ||
Sbjct: 488 aaaaattgaaaggaagagagcaatgagccagatactggccaagttgttaatctctggcat 429
Query: 900 gatgaacttccccgtgagcaggcagatggcaggcaggatacagtaaatgaggagcgggag 959
||||||||| || |||||||| ||||| ||||||| ||||| || | || ||||||||
Sbjct: 428 gatgaactttccagtgagcagacagattgcaggcaatatacaatagactagaagcgggag 369
Query: 960 ggacgtgagcgggtagatggtggtgttgatgtaggcgaatctctccaagaacttcaggcg 1019
||||| || ||||| ||||||||||||||||| ||||||||||||| |||||| |||||
Sbjct: 368 agacgttagtgggtaaatggtggtgttgatgtaagcgaatctctccaggaacttgaggcg 309
Query: 1020 tcctccgtagccgtaccatagggggcaatgccggctgaaaaggatttccactgaaccgag 1079
||||||||||| ||||||| ||||||||||||||||||||| ||||| || ||||| ||
Sbjct: 308 ccctccgtagccataccataaggggcaatgccggctgaaaagaatttcaacggaaccaag 249
Query: 1080 agcccaccggagcacctggttcagacggtctgagagattgatgggagccgatcccttgaa 1139
||||||||||||||| ||||||||||| ||||| ||||||||||| || |||||||||||
Sbjct: 248 agcccaccggagcacttggttcagacgatctgaaagattgatgggggcagatcccttgaa 189
Query: 1140 ggccggccgcttaggcatgcagtagatcgaccgccagcctcgtgcgtgcatcttgaaccc 1199
|| || |||||||||||||| |||| ||||||||||||| ||||||||||||||| ||
Sbjct: 188 agctgggcgcttaggcatgcaatagactgaccgccagcctcttgcgtgcatcttgaatcc 129
Query: 1200 agtgagaatatcttccgtcacagaaccatagatccacccaatctcagttccccattcaat 1259
||||||||||||||| || ||||| ||||| ||||| ||||||||||||||||| |||
Sbjct: 128 agtgagaatatcttctgtgacagatccataaatccaaccaatctcagttccccactcaga 69
Query: 1260 cttgtcctcgtagccacaacttatgacatggatagcttctttcagaagagattccggagt 1319
||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||
Sbjct: 68 cttgtcctcatagccacaacttatgacatggatagcttctttcaaaagagattctggagt 9
>gb|CA020225.1|CA020225 HV14L03r HV Hordeum vulgare subsp. vulgare cDNA clone HV14L03
5-PRIME, mRNA sequence
Length = 582
Score = 494 bits (249), Expect = e-137
Identities = 402/453 (88%)
Strand = Plus / Minus
Query: 1603 gggggctcataaccatatagagctgttctgttgaaaacacagccagtgcccacataaact 1662
||||| ||||||||||||| ||||||||||||||| ||||| ||||| ||||||||||||
Sbjct: 463 gggggttcataaccatataaagctgttctgttgaacacacaaccagtccccacataaact 404
Query: 1663 ggtccttggatgccatcaagacctctcaagttaatatcgaaaaacacggtgttcctgttg 1722
|||||||| |||||||| ||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 403 ggtccttgaatgccatcgagacccctcaagttaatatcaaaaaacacggtgttcctgttt 344
Query: 1723 gcatatcgatcattcctatcaataccatcgaacctctggggaaactgaacatagcagaca 1782
||||||| ||||||| ||||||| |||||||||||||| ||||| || ||||| ||||
Sbjct: 343 gcatatctatcattcgtatcaatgccatcgaacctctgaggaaattggacataacagatt 284
Query: 1783 ctccttcctaggttaggatccataaggaagcacatagcttccctgagagccttactgttg 1842
|||||||||| ||||| |||||||| ||||||||||| || || ||||| | || |||
Sbjct: 283 ttccttcctagattagggtccataagaaagcacatagcctctcttagagcgctgctattg 224
Query: 1843 ttgatgtagtgatcacaatcaagattcaacatgtattgtccattggtaagcacagctgag 1902
||||||||||||||||||||||||||||||||||| || ||||| ||||| ||||||||
Sbjct: 223 ttgatgtagtgatcacaatcaagattcaacatgtactgcccattagtaaggacagctgat 164
Query: 1903 acgcggacaagagcattcatggcaccagctttcttgtgatgctggaatccaggacgtttt 1962
|| || ||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 163 acacgaacaagtgcattcatggcaccagctttcttgtggtgctggaatccaggacgtttc 104
Query: 1963 tcacgagaaacatagaccaaacggggtagctcattaccctcagtatcaagaccaccactg 2022
|||||||| ||||| |||||||| || |||||||| || |||||||| || || |||||
Sbjct: 103 tcacgagacacataaaccaaacgaggaagctcattgccatcagtatcgaggcctccacta 44
Query: 2023 tgaccaaggaaaacctgaatcattccaggatgg 2055
||||||||||||||||||| |||||||||||||
Sbjct: 43 tgaccaaggaaaacctgaagcattccaggatgg 11
Score = 44.1 bits (22), Expect = 0.034
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 1469 caagattgaatactggcacagaactgtccacatgcttctgtgactt 1514
|||||||||| |||||||| |||| |||| ||||||| | ||||||
Sbjct: 582 caagattgaaaactggcacggaaccgtccgcatgcttgtctgactt 537
>gb|CA019676.1|CA019676 HV12L21r HV Hordeum vulgare subsp. vulgare cDNA clone HV12L21
5-PRIME, mRNA sequence
Length = 516
Score = 486 bits (245), Expect = e-135
Identities = 440/505 (87%)
Strand = Plus / Minus
Query: 2645 cattacgcacaggatttgtgatccggtagtgcaagaagatgcttagaacaatcaatcgta 2704
||||||||||||||||||||| |||||||||| ||||||||||||||||| ||| || |
Sbjct: 516 cattacgcacaggatttgtgagacggtagtgcaggaagatgcttagaacaaccaaccgca 457
Query: 2705 gcacaatgaccatcctgtatggatttatcctggaggaaggaagtggaactttcctagata 2764
| ||||||||||| ||||| |||||||| |||| |||| || || || || |||||||
Sbjct: 456 gaacaatgaccattctgtacggatttattttggatgaagcaatggggacctttctagata 397
Query: 2765 gaggctggcgagtttcatcgtttaataaggcatcttccatgttgtaatcagttgatgcat 2824
||||||||||||||||||| || | ||| || |||||||||||||| ||||| |||||||
Sbjct: 396 gaggctggcgagtttcatcattcagtaaagcgtcttccatgttgtattcagtagatgcat 337
Query: 2825 caatatcaccaacaccccggccctcagagggagcaatgcttgtgccattcgtcatgggaa 2884
| || ||| | | |||| || |||||||||||||||||||||||||| ||||||||||
Sbjct: 336 cgatgtcagtagctgcccgaccttcagagggagcaatgcttgtgccattagtcatgggaa 277
Query: 2885 ttgttcccttgtcctgcttcattttccagccatcaaccctctctttccaggcaacattcc 2944
||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 276 ttgcacccttgtcctgcttcattttccagccatcaactctctctttccaagcaacattcc 217
Query: 2945 caacgctaccagagaattccctcgacggatttgatgaatgattcatatagggaaatgggg 3004
||| || |||||||| ||||| |||||||||| ||||||||||| ||||| || || |
Sbjct: 216 caatactgccagagaactcccttgacggatttggtgaatgattcacgtaggggaacggag 157
Query: 3005 cgcgcctgccaatgttcccagtaggagacatcatatgatggtcaggggaagcaccaggga 3064
| || |||| |||||||||||||| |||||||||||||| ||||||||||| |||||||
Sbjct: 156 cacgtctgctgatgttcccagtaggggacatcatatgatgatcaggggaagctccaggga 97
Query: 3065 tttctcccgaaatctggctgttagtgactgacgggatgtatccccgagggatctcaccac 3124
||||||| || |||||||||||||||||||| |||| |||||||| ||||||||| ||||
Sbjct: 96 tttctcctgacatctggctgttagtgactgaagggacgtatcccctagggatctctccac 37
Query: 3125 tgtcgtacttggtaagcccgatctc 3149
|||||||||||| |||||||||||
Sbjct: 36 tgtcgtacttggagagcccgatctc 12
>gb|BE193304.2|BE193304 HVSMEh0080I07f Hordeum vulgare 5-45 DAP spike EST library HVcDNA0009
(5 to 45 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEh0080I07f, mRNA sequence
Length = 682
Score = 478 bits (241), Expect = e-133
Identities = 362/403 (89%)
Strand = Plus / Minus
Query: 1645 ccagtgcccacataaactggtccttggatgccatcaagacctctcaagttaatatcgaaa 1704
||||| |||||||||||||| | ||| ||||||||||| || |||||||||||||| |||
Sbjct: 403 ccagttcccacataaactggcctttgaatgccatcaaggcccctcaagttaatatcaaaa 344
Query: 1705 aacacggtgttcctgttggcatatcgatcattcctatcaataccatcgaacctctgggga 1764
|| || ||||||||||| ||||||||||||||||||||||||||||| |||||||| ||
Sbjct: 343 aagacagtgttcctgttcgcatatcgatcattcctatcaataccatcaaacctctgtggg 284
Query: 1765 aactgaacatagcagacactccttcctaggttaggatccataaggaagcacatagcttcc 1824
||||| ||||| ||||| | | |||||| |||||||| ||||||||||||||||||
Sbjct: 283 aactgcacataacagacttgcggacntaggtttggatccattaggaagcacatagcttcc 224
Query: 1825 ctgagagccttactgttgttgatgtagtgatcacaatcaagattcaacatgtattgtcca 1884
| || |||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 cggacagccttgctgttgttgatgtagtgatcacaatcaagattcaacatgtattgtcca 164
Query: 1885 ttggtaagcacagctgagacgcggacaagagcattcatggcaccagctttcttgtgatgc 1944
|| ||||| ||||| ||||| || ||||| ||||||||||||||||| |||||||| |||
Sbjct: 163 ttagtaaggacagccgagacacgaacaagggcattcatggcaccagccttcttgtggtgc 104
Query: 1945 tggaatccaggacgtttttcacgagaaacatagaccaaacggggtagctcattaccctca 2004
|||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||
Sbjct: 103 tggaatccaggacgcttttcacgagacacatagaccaaacgggggagctcattaccctcg 44
Query: 2005 gtatcaagaccaccactgtgaccaaggaaaacctgaatcattc 2047
|||||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 43 gtatcaaggccaccactgtgaccaaggaaaacntgaatcattc 1
>gb|BQ468619.1|BQ468619 HM01M13T HM Hordeum vulgare subsp. vulgare cDNA clone HM01M13
5-PRIME, mRNA sequence
Length = 653
Score = 472 bits (238), Expect = e-131
Identities = 511/602 (84%)
Strand = Plus / Minus
Query: 305 cctagcagttgatgccacacgttcgagtatccgggccagtgacgcgggtggtgaacggat 364
|||||||||||||||||||| || | |||| || |||||||| || ||||||||||| |
Sbjct: 612 cctagcagttgatgccacacatttggatatctggcccagtgactcgtgtggtgaacgggt 553
Query: 365 cgatgcgaacccacagcaaggagaagatcgacgccagcaggatcgcccagacaaccacga 424
|||||||||||||||||||||||||||| | || || ||||| |||||||| || ||||
Sbjct: 552 cgatgcgaacccacagcaaggagaagatgtatgcaagaaggatggcccagacgacaacga 493
Query: 425 tggtcggggtgcggttctgccgacccatgagacccttgaggaacgggtacaggtgaacga 484
||||||| |||||||||||||| ||||| || ||||||||||| ||||||| ||| | |
Sbjct: 492 tggtcggcgtgcggttctgccgtcccattagccccttgaggaatgggtacaagtggataa 433
Query: 485 tcacccagaaggcgaagaagagcttgccgaagagcggaccccacgactggtacccgctgt 544
||||||||||||| ||||||||||| ||||| ||||| ||||| ||||| || |||||||
Sbjct: 432 tcacccagaaggcaaagaagagcttcccgaaaagcggtccccatgactgatagccgctgt 373
Query: 545 tgatggcgtaggagatgccggcaacaacgccgaccaggttgatgatcaggatggtggtgg 604
|||| ||||||||| | || || ||||| ||||| ||||||||||||| ||| || || |
Sbjct: 372 tgatcgcgtaggaggtaccagccacaacaccgacaaggttgatgatcaagatagttgttg 313
Query: 605 gcgggatcagaagtgtcgtccacttgaacatgtacagctccgcgaagtcgccgtcttcat 664
| ||||||||||| |||||||||||||||||||| ||||| || || || ||||| |
Sbjct: 312 gtgggatcagaagagtcgtccacttgaacatgtagagctcggcaaaatcattatcttcgt 253
Query: 665 ccgaggccttggaggtgacggtgaagttggtgtcgatgccggcaagcaccttgaggaggc 724
| || || || || ||||| |||||| ||||||||||||| ||||| ||||| ||||| |
Sbjct: 252 cggatgcttttgaagtgacagtgaagctggtgtcgatgccagcaagtaccttcaggagac 193
Query: 725 cctggaagacggcgaagaggtgggcggagatgcctccgatgacccagaactgctcgttcc 784
| |||||||| || || || || || || || |||||||||||||||||||| || ||||
Sbjct: 192 cttggaagacagcaaacagatgtgcagaaatacctccgatgacccagaactgttcattcc 133
Query: 785 tccaccactcgtcgatgcccacgccgctccacctcatctccaggatacccgtggcgaaga 844
||||||||||||||||||| || ||||||||||||||||| |||||||| ||||| ||||
Sbjct: 132 tccaccactcgtcgatgccaacaccgctccacctcatctcaaggataccagtggcaaaga 73
Query: 845 tcgagatgaagagagagatgaaccagatactagcgaagttgctgatctctgggatgatga 904
|||| || ||||||||||| ||||| ||||| || | |||||| |||| |||||||||||
Sbjct: 72 tcgaaataaagagagagataaaccaaatactggcaatgttgctaatctgtgggatgatga 13
Query: 905 ac 906
||
Sbjct: 12 ac 11
>gb|BM442929.2|BM442929 EBro02_SQ001_O08_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ001_O08 5', mRNA sequence
Length = 463
Score = 470 bits (237), Expect = e-130
Identities = 408/463 (88%), Gaps = 4/463 (0%)
Strand = Plus / Minus
Query: 1275 acaacttatgacatggatagcttctttcagaagagattccggagtcgcagactgaggaac 1334
||||||||||||||||||||||||||||| ||||||||| ||||| | |||||||||||
Sbjct: 463 acaacttatgacatggatagcttctttcaaaagagattctggagtggaggactgaggaac 404
Query: 1335 acc-accatattccatcagagtggacgcaacaaaagctgcagattggccaaatctcttct 1393
||| ||||||||||||||||||||| |||||||| ||||| || ||||||||||||||||
Sbjct: 403 acccaccatattccatcagagtggaggcaacaaatgctgctgactggccaaatctcttct 344
Query: 1394 ccaagctcatttgagacataagaagtgatttctcatcatcaaatccagcgccttcaactc 1453
| ||||||||||||||||| |||| |||||||||||||||||| ||||| |||||||| |
Sbjct: 343 ctaagctcatttgagacatgagaactgatttctcatcatcaaacccagcaccttcaacac 284
Query: 1454 cctcctctatatcttcaagattgaatactggcacagaactgtccacatgcttctgtgact 1513
|||||||||| |||||||||||||| ||||| ||||||||||| |||||||| | |||||
Sbjct: 283 cctcctctatgtcttcaagattgaacactggaacagaactgtcgacatgcttgtttgact 224
Query: 1514 ttttcttgtctgagccc---ttctttgatttgcttcccttcttcctgccaccacatagtg 1570
||||||| ||||||| | |||||||| |||||| |||||||| |||| ||||| ||||
Sbjct: 223 ttttcttatctgagctccttttctttgacttgcttgccttcttcttgcccccacacagtg 164
Query: 1571 atgacaagaaaccacccttcttttgcttaattgggggctcataaccatatagagctgttc 1630
||| |||||||| |||||| |||||| ||||| ||||||||||| | ||| ||||
Sbjct: 163 atgccaagaaacttggcttcttcgccttaatcgggggttcataaccatagatagccgttc 104
Query: 1631 tgttgaaaacacagccagtgcccacataaactggtccttggatgccatcaagacctctca 1690
||||||||||||| ||||| |||||||||||||| ||||| ||||||||||| || ||||
Sbjct: 103 tgttgaaaacacaaccagttcccacataaactggcccttgaatgccatcaaggcccctca 44
Query: 1691 agttaatatcgaaaaacacggtgttcctgttggcatatcgatc 1733
|||||||||| ||||| || ||||||||||| |||||||||||
Sbjct: 43 agttaatatcaaaaaagacagtgttcctgttcgcatatcgatc 1
>gb|CA012990.1|CA012990 HT07B01r HT Hordeum vulgare subsp. vulgare cDNA clone HT07B01
5-PRIME, mRNA sequence
Length = 579
Score = 466 bits (235), Expect = e-129
Identities = 482/563 (85%), Gaps = 1/563 (0%)
Strand = Plus / Minus
Query: 541 ctgttgatggcgtaggagatgccggcaacaacgccgaccaggttgatgatcaggatggtg 600
|||||||||||||||||| | || ||||| || ||||||| ||| ||||||| ||||||
Sbjct: 571 ctgttgatggcgtaggaggtaccagcaacgacaccgaccatgttaatgatcaagatggtc 512
Query: 601 gtgggcgggatcagaagtgtcgtccacttgaacatgtacagctccgcgaagtcgccgtct 660
|| || ||||| ||||| |||||||||||||||||||| ||||| || |||||||| |||
Sbjct: 511 gtcggagggatgagaagcgtcgtccacttgaacatgtagagctcagcaaagtcgccttct 452
Query: 661 tcatccgaggccttggaggtgacggtgaagttggtgtcgatgccggcaagcaccttgagg 720
|| || ||||| |||||||| ||||||||||||||||| |||||||||||||| ||
Sbjct: 451 tcgtcattagcctttgaggtgacagtgaagttggtgtcgataccggcaagcaccttcaga 392
Query: 721 aggccctggaagacggcgaagaggtgggcggagatgcctccgatgacccagaactgctcg 780
|| ||||| |||||||| || || ||||| ||||| ||||| |||||||||||||| ||
Sbjct: 391 agaccctgaaagacggcaaacagatgggcagagatacctccaatgacccagaactgttca 332
Query: 781 ttcctccaccactcgtcgatgcccacgccgctccacctcatctccaggatacccgtggcg 840
||||||||||||||||| ||||| || || |||||||||||||| |||||||| |||||
Sbjct: 331 ttcctccaccactcgtcaatgccaacaccactccacctcatctcaaggataccggtggca 272
Query: 841 aagatcgagatgaagagagagatgaaccagatactagcgaagttgctgatctctgggatg 900
|| || || | |||||||| |||||||||||||| || |||||||| |||||||| |||
Sbjct: 271 aaaattgaaaggaagagagcaatgaaccagatactggccaagttgctaatctctggcatg 212
Query: 901 atgaacttccccgtgagcaggcagatggcaggcaggatacagtaaatgaggagcgggagg 960
|||||||| || ||||||| ||||| ||||||| ||||| || | || ||||||||
Sbjct: 211 atgaactttccagtgagcaaacagatagcaggcaatatacaatagactagaagcgggaga 152
Query: 961 gacgtgagcgggtagatggtggtgttgatgtaggcgaatctctccaagaacttcaggcgt 1020
||||| || ||||| ||||||||||||||||| ||||||||||||| |||||| |||||
Sbjct: 151 gacgttagtgggtaaatggtggtgttgatgtaagcgaatctctccaggaacttgaggcgc 92
Query: 1021 cctccgtagccgtaccatagggggcaatgccggctgaaaaggatttccactgaaccgaga 1080
||||||||||| ||||||| ||||||||||||||||||||| ||||| || ||||| |||
Sbjct: 91 cctccgtagccataccataaggggcaatgccggctgaaaagaatttcaacggaaccaaga 32
Query: 1081 gcccaccggagcacctggttcag 1103
||||||||||||| |||||||||
Sbjct: 31 gcccaccggagca-ctggttcag 10
>gb|AV914933.1|AV914933 AV914933 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags9b06 5', mRNA sequence
Length = 654
Score = 464 bits (234), Expect = e-128
Identities = 522/618 (84%)
Strand = Plus / Minus
Query: 370 cgaacccacagcaaggagaagatcgacgccagcaggatcgcccagacaaccacgatggtc 429
||||||||||||||||||||||| || ||||| |||| |||||||| | || || |||
Sbjct: 618 cgaacccacagcaaggagaagattgaagccaggaggacagcccagacgatgacaatcgtc 559
Query: 430 ggggtgcggttctgccgacccatgagacccttgaggaacgggtacaggtgaacgatcacc 489
|| |||||||| |||| ||||| |||||||||||||| ||||| | |||||| ||||||
Sbjct: 558 ggtgtgcggttttgcctgcccataagacccttgaggaaggggtataagtgaacaatcacc 499
Query: 490 cagaaggcgaagaagagcttgccgaagagcggaccccacgactggtacccgctgttgatg 549
|||||||| ||||||||||| ||||||||||| ||||| || ||||| || |||||||||
Sbjct: 498 cagaaggcaaagaagagcttcccgaagagcggcccccaagattggtaaccactgttgatg 439
Query: 550 gcgtaggagatgccggcaacaacgccgaccaggttgatgatcaggatggtggtgggcggg 609
||||||||| | || ||||| || ||||||| ||| ||||||| |||||| || || |||
Sbjct: 438 gcgtaggaggtaccagcaacgacaccgaccatgttaatgatcaagatggtcgtcggaggg 379
Query: 610 atcagaagtgtcgtccacttgaacatgtacagctccgcgaagtcgccgtcttcatccgag 669
|| ||||| |||||||||||||||||||| ||||| || |||||||| ||||| ||
Sbjct: 378 atgagaagcgtcgtccacttgaacatgtagagctcagcaaagtcgccttcttcgtcatta 319
Query: 670 gccttggaggtgacggtgaagttggtgtcgatgccggcaagcaccttgaggaggccctgg 729
||||| |||||||| ||||||||||||||||| |||||||||||||| || || |||||
Sbjct: 318 gcctttgaggtgacagtgaagttggtgtcgataccggcaagcaccttcagaagaccctga 259
Query: 730 aagacggcgaagaggtgggcggagatgcctccgatgacccagaactgctcgttcctccac 789
|||||||| || || ||||| ||||| ||||| |||||||||||||| || |||||||||
Sbjct: 258 aagacggcaaacagatgggcagagatacctccaatgacccagaactgttcattcctccac 199
Query: 790 cactcgtcgatgcccacgccgctccacctcatctccaggatacccgtggcgaagatcgag 849
|||||||| ||||| || || |||||||||||||| |||||||| ||||| || || ||
Sbjct: 198 cactcgtcaatgccaacaccactccacctcatctcaaggataccggtggcaaaaattgaa 139
Query: 850 atgaagagagagatgaaccagatactagcgaagttgctgatctctgggatgatgaacttc 909
| |||||||| |||||||||||||| || |||||||| |||||||| |||||||||||
Sbjct: 138 aggaagagagcaatgaaccagatactggccaagttgctaatctctggcatgatgaacttt 79
Query: 910 cccgtgagcaggcagatggcaggcaggatacagtaaatgaggagcgggagggacgtgagc 969
|| ||||||| ||||| ||||||| ||||| || | || |||||||| ||||| ||
Sbjct: 78 ccagtgagcaaacagatagcaggcaatatacaatagactagaagcgggagagacgttagt 19
Query: 970 gggtagatggtggtgttg 987
||||| ||||||||||||
Sbjct: 18 gggtaaatggtggtgttg 1
>gb|BF624752.2|BF624752 HVSMEa0017K09f Hordeum vulgare seedling shoot EST library HVcDNA0001
(Cold stress) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEa0017K09f, mRNA sequence
Length = 789
Score = 458 bits (231), Expect = e-127
Identities = 390/443 (88%)
Strand = Plus / Minus
Query: 1604 ggggctcataaccatatagagctgttctgttgaaaacacagccagtgcccacataaactg 1663
|||| ||||||||||| | ||| ||| ||||||||||||| ||||| || ||||||||||
Sbjct: 525 ggggttcataaccatagatagccgttgtgttgaaaacacaaccagttccgacataaactg 466
Query: 1664 gtccttggatgccatcaagacctctcaagttaatatcgaaaaacacggtgttcctgttgg 1723
| ||| ||||||||||| || |||||||||||||| ||||| || ||||||||||| |
Sbjct: 465 gccctgaaatgccatcaaggcccctcaagttaatatcaaaaaagacagtgttcctgttcg 406
Query: 1724 catatcgatcattcctatcaataccatcgaacctctggggaaactgaacatagcagacac 1783
||||||||||||||||||||| ||||||||||||||| || ||||| ||||| |||||
Sbjct: 405 catatcgatcattcctatcaagaccatcgaacctctgtgggaactgcacataacagactt 346
Query: 1784 tccttcctaggttaggatccataaggaagcacatagcttccctgagagccttactgttgt 1843
| |||||||| |||||||| ||||||||||||||||||| || ||| || |||||||
Sbjct: 345 gcggacctaggtttggatccattaggaagcacatagcttcccggacagcattgctgttgt 286
Query: 1844 tgatgtagtgatcacaatcaagattcaacatgtattgtccattggtaagcacagctgaga 1903
||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||
Sbjct: 285 tgatgtagtgatcacaatcaagattcaacatgtattgtccattagtaaggacagccgaga 226
Query: 1904 cgcggacaagagcattcatggcaccagctttcttgtgatgctggaatccaggacgttttt 1963
| || ||||| ||||||||||||||||| || ||||| ||||||||||||||||| ||||
Sbjct: 225 cacgaacaagggcattcatggcaccagccttattgtggtgctggaatccaggacgctttt 166
Query: 1964 cacgagaaacatagaccaaacggggtagctcattaccctcagtatcaagaccaccactgt 2023
||||||| ||||||||||||||||| |||||||||||||| |||||||| ||||| ||||
Sbjct: 165 cacgagacacatagaccaaacgggggagctcattaccctcggtatcaaggccacctctgt 106
Query: 2024 gaccaaggaaaacctgaatcatt 2046
||||||| ||| | |||||||||
Sbjct: 105 gaccaagtaaatcttgaatcatt 83
>gb|BQ463573.1|BQ463573 HI05L24r HI Hordeum vulgare subsp. vulgare cDNA clone HI05L24
5-PRIME, mRNA sequence
Length = 591
Score = 454 bits (229), Expect = e-125
Identities = 459/536 (85%)
Strand = Plus / Minus
Query: 630 gaacatgtacagctccgcgaagtcgccgtcttcatccgaggccttggaggtgacggtgaa 689
||||||||| ||||| || |||||||| ||||| || |||| |||||||| |||||
Sbjct: 591 gaacatgtagagctcagcaaagtcgccttcttcgtcattagcctntgaggtgacagtgaa 532
Query: 690 gttggtgtcgatgccggcaagcaccttgaggaggccctggaagacggcgaagaggtgggc 749
|||||||||||| |||||||||||||| || || ||||| |||||||| || || |||||
Sbjct: 531 gttggtgtcgataccggcaagcaccttcagaagaccctgaaagacggcaaacagatgggc 472
Query: 750 ggagatgcctccgatgacccagaactgctcgttcctccaccactcgtcgatgcccacgcc 809
||||| ||||| |||||||||||||| || ||||||||||||||||| ||||| || ||
Sbjct: 471 agagatacctccaatgacccagaactgttcattcctccaccactcgtcaatgccaacacc 412
Query: 810 gctccacctcatctccaggatacccgtggcgaagatcgagatgaagagagagatgaacca 869
|||||||||||||| |||||||| ||||| || || || | |||||||| ||||||||
Sbjct: 411 actccacctcatctcaaggataccggtggcaaaaattgaaaggaagagagcaatgaacca 352
Query: 870 gatactagcgaagttgctgatctctgggatgatgaacttccccgtgagcaggcagatggc 929
|||||| || |||||||| |||||||| ||||||||||| || ||||||| ||||| ||
Sbjct: 351 gatactggccaagttgctaatctctggcatgatgaactttccagtgagcaaacagatagc 292
Query: 930 aggcaggatacagtaaatgaggagcgggagggacgtgagcgggtagatggtggtgttgat 989
||||| ||||| || | || |||||||| ||||| || ||||| ||||||||||||||
Sbjct: 291 aggcaatatacaatagactagaagcgggagagacgttagtgggtaaatggtggtgttgat 232
Query: 990 gtaggcgaatctctccaagaacttcaggcgtcctccgtagccgtaccatagggggcaatg 1049
||| ||||||||||||| |||||| ||||| ||||||||||| ||||||| |||||||||
Sbjct: 231 gtaagcgaatctctccaggaacttgaggcgccctccgtagccataccataaggggcaatg 172
Query: 1050 ccggctgaaaaggatttccactgaaccgagagcccaccggagcacctggttcagacggtc 1109
|||||||||||| ||||| || ||||| ||||||||||||||||| ||||||||||| ||
Sbjct: 171 ccggctgaaaagaatttcaacggaaccaagagcccaccggagcacttggttcagacgatc 112
Query: 1110 tgagagattgatgggagccgatcccttgaaggccggccgcttaggcatgcagtaga 1165
||| ||||||||||| || ||||||||||| || || |||||||||||||| ||||
Sbjct: 111 tgaaagattgatgggggcagatcccttgaaagctgggcgcttaggcatgcaataga 56
>gb|BU986849.1|BU986849 HF13B10r HF Hordeum vulgare subsp. vulgare cDNA clone HF13B10
5-PRIME, mRNA sequence
Length = 622
Score = 442 bits (223), Expect = e-122
Identities = 469/551 (85%)
Strand = Plus / Minus
Query: 367 atgcgaacccacagcaaggagaagatcgacgccagcaggatcgcccagacaaccacgatg 426
|||||||||||||||||||||||||| || || || ||||| |||||||| || ||||||
Sbjct: 622 atgcgaacccacagcaaggagaagatggatgcaagaaggatggcccagacgacaacgatg 563
Query: 427 gtcggggtgcggttctgccgacccatgagacccttgaggaacgggtacaggtgaacgatc 486
||||| |||||||||||||| ||||| || ||||||||||| ||||||| ||| | |||
Sbjct: 562 gtcggcgtgcggttctgccgtcccattagccccttgaggaatgggtacaagtggataatc 503
Query: 487 acccagaaggcgaagaagagcttgccgaagagcggaccccacgactggtacccgctgttg 546
||||||||||| ||||||||||| ||||| ||||| ||||| ||||| || |||||||||
Sbjct: 502 acccagaaggcaaagaagagcttcccgaaaagcggtccccatgactgatagccgctgttg 443
Query: 547 atggcgtaggagatgccggcaacaacgccgaccaggttgatgatcaggatggtggtgggc 606
|| ||||||||| | || || ||||| ||||| ||||||||||||| ||| || || ||
Sbjct: 442 atcgcgtaggaggtaccagccacaacaccgacaaggttgatgatcaagatagttgttggt 383
Query: 607 gggatcagaagtgtcgtccacttgaacatgtacagctccgcgaagtcgccgtcttcatcc 666
||||||||||| |||||||||||||||||||| ||||| || || || ||||| ||
Sbjct: 382 gggatcagaagagtcgtccacttgaacatgtagagctcggcaaaatcattatcttcgtcg 323
Query: 667 gaggccttggaggtgacggtgaagttggtgtcgatgccggcaagcaccttgaggaggccc 726
|| || || || ||||| |||||| ||||||||||||| ||||| ||||| ||||| ||
Sbjct: 322 gatgcttttgaagtgacagtgaagctggtgtcgatgccagcaagtaccttcaggagacct 263
Query: 727 tggaagacggcgaagaggtgggcggagatgcctccgatgacccagaactgctcgttcctc 786
|||||||| || || || || || || || |||||||||||||||||||| || ||||||
Sbjct: 262 tggaagacagcaaacagatgtgcagaaatacctccgatgacccagaactgttcattcctc 203
Query: 787 caccactcgtcgatgcccacgccgctccacctcatctccaggatacccgtggcgaagatc 846
||||||||||||||||| || ||||||||||||||||| |||||||| ||||| ||||||
Sbjct: 202 caccactcgtcgatgccaacaccgctccacctcatctcaaggataccagtggcaaagatc 143
Query: 847 gagatgaagagagagatgaaccagatactagcgaagttgctgatctctgggatgatgaac 906
|| || ||||||||||| ||||| ||||| || | |||||| |||| |||||||||||||
Sbjct: 142 gaaataaagagagagataaaccaaatactggcaatgttgctaatctgtgggatgatgaac 83
Query: 907 ttccccgtgag 917
|| ||||||||
Sbjct: 82 tttcccgtgag 72
>gb|BG414971.1|BG414971 HVSMEk0004I03f Hordeum vulgare testa/pericarp EST library HVcDNA0013
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEk0004I03f, mRNA sequence
Length = 634
Score = 436 bits (220), Expect = e-120
Identities = 499/591 (84%), Gaps = 1/591 (0%)
Strand = Plus / Minus
Query: 477 gtgaacgatcacccagaaggcgaagaagagcttgccgaagagcggaccccacgact-ggt 535
|||||| |||||||||||||| ||||| |||| | |||| ||| ||||| || | ||
Sbjct: 591 gtgaacaatcacccagaaggcaaagaatggcttcctaaagaacggcccccaagaattgga 532
Query: 536 acccgctgttgatggcgtaggagatgccggcaacaacgccgaccaggttgatgatcagga 595
| || |||||||||||||||||| | || ||||| || ||||||| ||| ||||||| ||
Sbjct: 531 aaccactgttgatggcgtaggaggtaccagcaacgacaccgaccatgttaatgatcaaga 472
Query: 596 tggtggtgggcgggatcagaagtgtcgtccacttgaacatgtacagctccgcgaagtcgc 655
|||| || || ||||| ||||| |||||||||||||||||||| ||||| || ||||||
Sbjct: 471 tggtcgtcggagggatgagaagcgtcgtccacttgaacatgtagagctcagcanagtcgc 412
Query: 656 cgtcttcatccgaggccttggaggtgacggtgaagttggtgtcgatgccggcaagcacct 715
| ||||| || ||||| |||||||| ||||||||||||||||| |||||||||||||
Sbjct: 411 cttcttcgtcattagcctttgaggtgacagtgaagttggtgtcgataccggcaagcacct 352
Query: 716 tgaggaggccctggaagacggcgaagaggtgggcggagatgcctccgatgacccagaact 775
| || || ||||| |||||||| || || ||||| ||||| ||||| |||||||||||||
Sbjct: 351 tcagaagaccctgaaagacggcaaacagatgggcagagatacctccaatgacccagaact 292
Query: 776 gctcgttcctccaccactcgtcgatgcccacgccgctccacctcatctccaggatacccg 835
| || ||||||||||||||||| ||||| || || |||||||||||||| |||||||| |
Sbjct: 291 gttcattcctccaccactcgtcaatgccaacaccactccacctcatctcaaggataccgg 232
Query: 836 tggcgaagatcgagatgaagagagagatgaaccagatactagcgaagttgctgatctctg 895
|||| || || || | |||||||| |||||||||||||| || |||||||| |||||||
Sbjct: 231 tggcaaaaattgaaaggaagagagcaatgaaccagatactggccaagttgctaatctctg 172
Query: 896 ggatgatgaacttccccgtgagcaggcagatggcaggcaggatacagtaaatgaggagcg 955
| ||||||||||| || |||||||| ||||| ||||||| ||||| || | || ||||
Sbjct: 171 gcatgatgaactttccagtgagcagacagattgcaggcaatatacaatagactagaagcg 112
Query: 956 ggagggacgtgagcgggtagatggtggtgttgatgtaggcgaatctctccaagaacttca 1015
|||| ||||| || ||||| ||||||||||||||||| ||||||||||||| |||||| |
Sbjct: 111 ggagagacgttagtgggtaaatggtggtgttgatgtaagcgaatctctccaggaacttga 52
Query: 1016 ggcgtcctccgtagccgtaccatagggggcaatgccggctgaaaaggattt 1066
|||| ||||||||||| ||||||| ||||||||||||||||||||| ||||
Sbjct: 51 ggcgccctccgtagccataccataaggggcaatgccggctgaaaagaattt 1
>gb|BM816139.1|BM816139 HC105G09_T3.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC105G09_T3.ab1 similar to (AF200528) cellulose
synthase-4 [Zea mays],(AF200529) cellulose synthase-5
[Zea mays],(AF200533) cellulose synthase-9 [Zea
mays],cellulose synthase catalytic subunit [Arabidopsis
thaliana],unnamed protein product [Arabidopsis
thaliana],, mRNA sequence
Length = 916
Score = 430 bits (217), Expect = e-118
Identities = 515/613 (84%), Gaps = 1/613 (0%)
Strand = Plus / Minus
Query: 307 tagcagttgatgccacacgttcgagtatccgggccagtgacgcgggtggtgaacggatcg 366
||||||||||||||||| ||| | ||| ||||||| || || || ||||| |||||
Sbjct: 641 tagcagttgatgccacaggtttggatatttgggccagcgagacgtgtagtgaatggatca 582
Query: 367 atgcgaacccacagcaaggagaagatcgacgccagcaggatcgcccagacaaccacgatg 426
| ||||||||||||||||||||||| || ||||| |||| |||||||| | || ||
Sbjct: 581 acacgaacccacagcaaggagaagattgaagccaggaggacagcccagacgatgacaatc 522
Query: 427 gtcggggtgcggttctgccgacccatgagacccttgaggaacgggtacaggtgaacgatc 486
||||| |||||||| |||| ||||| |||||||||||||| ||||| | |||||| |||
Sbjct: 521 gtcggtgtgcggttttgcctgcccataagacccttgaggaaggggtataagtgaacaatc 462
Query: 487 acccagaaggcgaagaagagcttgccgaagagcggaccccacgactggtacccgctgttg 546
||||||||||| ||||||||||| ||||||||||| ||||| || ||||| || ||||||
Sbjct: 461 acccagaaggcaaagaagagcttcccgaagagcggcccccaagattggtaaccactgttg 402
Query: 547 atggcgtaggagatgccggcaacaacgccgaccaggttgatgatcaggatggtggtgggc 606
|||||||||||| | || ||||| || ||||||| ||| ||||||| |||||| || ||
Sbjct: 401 atggcgtaggaggtaccagcaacgacaccgaccatgttaatgatcaagatggtcgtcgga 342
Query: 607 gggatcagaagtgtcgtccacttgaacatgtacagctccgcgaagtcgccgtcttcatcc 666
||||| ||||| |||||||||||||||||||| ||||| || |||||||| ||||| ||
Sbjct: 341 gggatgagaagcgtcgtccacttgaacatgtagagctcagcaaagtcgccttcttcgtca 282
Query: 667 gaggccttggaggtgacggtgaagttggtgtcgatgccggcaagcaccttgaggaggccc 726
||||| |||||||| ||||||||||||||||| |||||||||||||| || || |||
Sbjct: 281 ttagcctttgaggtgacagtgaagttggtgtcgataccggcaagcaccttcagaagaccc 222
Query: 727 tggaagacggcgaagaggtgggcggagatgcctccgatgacccagaactgctcgttcctc 786
|| |||||||| || || ||||| ||||| ||||| |||||||||||||| || ||||||
Sbjct: 221 tgaaagacggcaaacagatgggcagagatacctccaatgacccagaactgttcattcctc 162
Query: 787 caccactcgtcgatgcccacgccgctccacctcatctccaggatacccgtggcgaagatc 846
||||||||||| ||||| || || |||||||||||||| |||||||| ||||| || ||
Sbjct: 161 caccactcgtcaatgccaacaccactccacctcatctcaaggataccggtggcaaaaatt 102
Query: 847 gagatgaagagagagatgaaccagatactagcgaagttgctgatctctgggatgatgaac 906
|| | |||||||| |||||||||||||| || |||||||| |||||||| | |||||||
Sbjct: 101 gaaaggaagagagcaatgaaccagatactggccaagttgctaatctctggca-gatgaac 43
Query: 907 ttccccgtgagca 919
|| || |||||||
Sbjct: 42 tttccagtgagca 30
>gb|AV914152.1|AV914152 AV914152 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags4p09 5', mRNA sequence
Length = 583
Score = 412 bits (208), Expect = e-113
Identities = 433/508 (85%)
Strand = Plus / Minus
Query: 427 gtcggggtgcggttctgccgacccatgagacccttgaggaacgggtacaggtgaacgatc 486
||||| |||||||| |||| ||||| |||||||||||||| ||||| | |||||| |||
Sbjct: 560 gtcggtgtgcggttttgcctgcccataagacccttgaggaaggggtataagtgaacaatc 501
Query: 487 acccagaaggcgaagaagagcttgccgaagagcggaccccacgactggtacccgctgttg 546
||||||||||| ||||||||||| ||||||||||| ||||| || ||||| || ||||||
Sbjct: 500 acccagaaggcaaagaagagcttcccgaagagcggcccccaagattggtaaccactgttg 441
Query: 547 atggcgtaggagatgccggcaacaacgccgaccaggttgatgatcaggatggtggtgggc 606
|||||||||||| | || ||||| || ||||||| ||| ||||||| |||||| || ||
Sbjct: 440 atggcgtaggaggtaccagcaacgacaccgaccatgttaatgatcaagatggtcgtcgga 381
Query: 607 gggatcagaagtgtcgtccacttgaacatgtacagctccgcgaagtcgccgtcttcatcc 666
||||| ||||| |||||||||||||||||||| ||||| || |||||||| ||||| ||
Sbjct: 380 gggatgagaagcgtcgtccacttgaacatgtagagctcagcaaagtcgccttcttcgtca 321
Query: 667 gaggccttggaggtgacggtgaagttggtgtcgatgccggcaagcaccttgaggaggccc 726
||||| |||||||| ||||||||||||||||| |||||||||||||| || || |||
Sbjct: 320 ttagcctttgaggtgacagtgaagttggtgtcgataccggcaagcaccttcagaagaccc 261
Query: 727 tggaagacggcgaagaggtgggcggagatgcctccgatgacccagaactgctcgttcctc 786
|| |||||||| || || ||||| ||||| ||||| |||||||||||||| || ||||||
Sbjct: 260 tgaaagacggcaaacagatgggcagagatacctccaatgacccagaactgttcattcctc 201
Query: 787 caccactcgtcgatgcccacgccgctccacctcatctccaggatacccgtggcgaagatc 846
||||||||||| ||||| || || |||||||||||||| |||||||| ||||| || ||
Sbjct: 200 caccactcgtcaatgccaacaccactccacctcatctcaaggataccggtggcaaaaatt 141
Query: 847 gagatgaagagagagatgaaccagatactagcgaagttgctgatctctgggatgatgaac 906
|| | |||||||| |||||||||||||| || |||||||| |||||||| |||||||||
Sbjct: 140 gaaaggaagagagcaatgaaccagatactggccaagttgctaatctctggcatgatgaac 81
Query: 907 ttccccgtgagcaggcagatggcaggca 934
|| || ||||||| ||||| |||||||
Sbjct: 80 tttccagtgagcaaacagatagcaggca 53
>gb|CB876338.1|CB876338 HX10P19w HX Hordeum vulgare subsp. vulgare cDNA clone HX10P19
3-PRIME, mRNA sequence
Length = 616
Score = 412 bits (208), Expect = e-113
Identities = 442/520 (85%)
Strand = Plus / Plus
Query: 305 cctagcagttgatgccacacgttcgagtatccgggccagtgacgcgggtggtgaacggat 364
|||||||||||||||||||| || | |||| || |||||||| || ||||||||||| |
Sbjct: 93 cctagcagttgatgccacacatttggatatctggcccagtgactcgtgtggtgaacgggt 152
Query: 365 cgatgcgaacccacagcaaggagaagatcgacgccagcaggatcgcccagacaaccacga 424
|||||||||||||||||||||||||||| || || || ||||| |||||||| || ||||
Sbjct: 153 cgatgcgaacccacagcaaggagaagatggatgcaagaaggatggcccagacgacaacga 212
Query: 425 tggtcggggtgcggttctgccgacccatgagacccttgaggaacgggtacaggtgaacga 484
||||||| |||||||||||||| ||||| || ||||||||||| ||||||| ||| | |
Sbjct: 213 tggtcggcgtgcggttctgccgtcccattagccccttgaggaatgggtacaagtggataa 272
Query: 485 tcacccagaaggcgaagaagagcttgccgaagagcggaccccacgactggtacccgctgt 544
||||||||||||| ||||||||||| ||||| ||||| ||||| ||||| || |||||||
Sbjct: 273 tcacccagaaggcaaagaagagcttcccgaaaagcggtccccatgactgatagccgctgt 332
Query: 545 tgatggcgtaggagatgccggcaacaacgccgaccaggttgatgatcaggatggtggtgg 604
|||| ||||||||| | || || ||||| ||||| ||||||||||||| ||| || || |
Sbjct: 333 tgatcgcgtaggaggtaccagccacaacaccgacaaggttgatgatcaagatagttgttg 392
Query: 605 gcgggatcagaagtgtcgtccacttgaacatgtacagctccgcgaagtcgccgtcttcat 664
| ||||||||||| |||||||||||||||||||| ||||| || || || ||||| |
Sbjct: 393 gtgggatcagaagagtcgtccacttgaacatgtagagctcggcaaaatcattatcttcgt 452
Query: 665 ccgaggccttggaggtgacggtgaagttggtgtcgatgccggcaagcaccttgaggaggc 724
| || || || || ||||| |||||| ||||||||||||| ||||| ||||| ||||| |
Sbjct: 453 cggatgcttttgaagtgacagtgaagctggtgtcgatgccagcaagtaccttcaggagac 512
Query: 725 cctggaagacggcgaagaggtgggcggagatgcctccgatgacccagaactgctcgttcc 784
| |||||||| || || || || || || || |||||||||||||||||||| || ||||
Sbjct: 513 cttggaagacagcaaacagatgtgcagaaatacctccgatgacccagaactgttcattcc 572
Query: 785 tccaccactcgtcgatgcccacgccgctccacctcatctc 824
||||||||||||||||||| || |||||||||||||||||
Sbjct: 573 tccaccactcgtcgatgccaacaccgctccacctcatctc 612
>gb|BE195554.3|BE195554 HVSMEh0089G13f Hordeum vulgare 5-45 DAP spike EST library HVcDNA0009
(5 to 45 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEh0089G13f, mRNA sequence
Length = 845
Score = 410 bits (207), Expect = e-112
Identities = 438/511 (85%), Gaps = 3/511 (0%)
Strand = Plus / Minus
Query: 2359 tcatcagatacatagcaagagaccttatccacaggatagtccaca-gcgagaatggatag 2417
|||||||||||||||||||||||||| |||| ||||| || ||| || |||||||||||
Sbjct: 510 tcatcagatacatagcaagagaccttgtccatgggataatc-acacgcaagaatggatag 452
Query: 2418 cacggtattggcagtgacaagaggaggctccttcattgggtcgacagtactgacaaaaat 2477
| |||| ||| |||| || | ||| |||||||||| |||||||| ||||||| || ||
Sbjct: 451 cccggtgttgacagtaacgataggtggctccttcaaggggtcgactgtactgaggaatat 392
Query: 2478 gtcaacagcagccaactgagatggctcaccttcccggtcataccttaatgcgagtctatc 2537
||||||||||||||||||||| || |||| | |||||||||||||| || ||||||||
Sbjct: 391 gtcaacagcagccaactgagagggttcacttcttcggtcataccttaaagccagtctatc 332
Query: 2538 aaggtaagtctcgcggttgattgg-aaaccactttggaaactgatccaatatccaggaaa 2596
|||||| ||||| ||||||||||| ||||||||| || |||||||||| ||||||||| |
Sbjct: 331 aaggtaggtctcccggttgattgggaaaccacttcgggaactgatccagtatccaggata 272
Query: 2597 gagcaaaccagatctcacatataacagatagaagccacagtgggtatgcattacgcacag 2656
||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||
Sbjct: 271 aagcaaaccaaatctcacatataacagataaaagccacagcgggtatgcattacgcacag 212
Query: 2657 gatttgtgatccggtagtgcaagaagatgcttagaacaatcaatcgtagcacaatgacca 2716
||||||||| |||||||||| ||||||||||||||||| ||| || || ||||||||||
Sbjct: 211 gatttgtgagacggtagtgcaggaagatgcttagaacaaccaaccgcagaacaatgacca 152
Query: 2717 tcctgtatggatttatcctggaggaaggaagtggaactttcctagatagaggctggcgag 2776
| ||||| |||||||| |||| |||| || || || || |||||||||||||||||||
Sbjct: 151 ttctgtacggatttattttggatgaagcaatggggacctttctagatagaggctggcgag 92
Query: 2777 tttcatcgtttaataaggcatcttccatgttgtaatcagttgatgcatcaatatcaccaa 2836
||||||| || | ||| || |||||||||||||| ||||| |||||||| || ||| |
Sbjct: 91 tttcatcattcagtaaagcgtcttccatgttgtattcagtagatgcatcgatgtcagtag 32
Query: 2837 caccccggccctcagagggagcaatgcttgt 2867
| |||| || ||||||||||||||||||||
Sbjct: 31 ctgcccgaccttcagagggagcaatgcttgt 1
>gb|CA023762.1|CA023762 HZ47F10r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ47F10
5-PRIME, mRNA sequence
Length = 404
Score = 410 bits (207), Expect = e-112
Identities = 323/361 (89%), Gaps = 3/361 (0%)
Strand = Plus / Minus
Query: 1225 ccatagatccacccaatctcagttccccattcaatcttgtcctcgtagccacaacttatg 1284
||||| ||||| ||||||||||||||||| ||| ||||||||| |||||||||||||||
Sbjct: 404 ccataaatccaaccaatctcagttccccactcagacttgtcctcatagccacaacttatg 345
Query: 1285 acatggatagcttctttcagaagagattccggagtcgcagactgaggaacaccaccatat 1344
||||||||||||||||||| ||||||||| ||||| | |||||||||||||||||||||
Sbjct: 344 acatggatagcttctttcaaaagagattctggagtggaggactgaggaacaccaccatat 285
Query: 1345 tccatcagagtggacgcaacaaaagctgcagattggccaaatctcttctccaagctcatt 1404
|||||||||||||| |||||||| ||||| || ||||||||||||||||| |||||||||
Sbjct: 284 tccatcagagtggaggcaacaaatgctgctgactggccaaatctcttctctaagctcatt 225
Query: 1405 tgagacataagaagtgatttctcatcatcaaatccagcgccttcaactccctcctctata 1464
|||||||| |||| |||||||||||||||||| ||||| |||||||| |||||||||||
Sbjct: 224 tgagacatgagaactgatttctcatcatcaaacccagcaccttcaacaccctcctctatg 165
Query: 1465 tcttcaagattgaatactggcacagaactgtccacatgcttctgtgactttttcttgtct 1524
|||||||||||||| ||||| ||||||||||| |||||||| | |||||||||||| |||
Sbjct: 164 tcttcaagattgaacactggaacagaactgtcgacatgcttgtttgactttttcttatct 105
Query: 1525 gagccc---ttctttgatttgcttcccttcttcctgccaccacatagtgatgacaagaaa 1581
|||| | |||||||| |||||| |||||||| |||| ||||| ||||||| |||||||
Sbjct: 104 gagctccttttctttgacttgcttgccttcttcttgcccccacacagtgatgccaagaaa 45
Query: 1582 c 1582
|
Sbjct: 44 c 44
>gb|BU988138.1|BU988138 HF16M09r HF Hordeum vulgare subsp. vulgare cDNA clone HF16M09
5-PRIME, mRNA sequence
Length = 643
Score = 408 bits (206), Expect = e-112
Identities = 527/634 (83%)
Strand = Plus / Minus
Query: 443 gccgacccatgagacccttgaggaacgggtacaggtgaacgatcacccagaaggcgaaga 502
|||| ||||| || ||||||||||| ||||||| ||| | |||||||||||||| ||||
Sbjct: 643 gccgtcccattagccccttgaggaatgggtacaagtggataatcacccagaaggcaaaga 584
Query: 503 agagcttgccgaagagcggaccccacgactggtacccgctgttgatggcgtaggagatgc 562
||||||| ||||| ||||| ||||| ||||| || ||||||||||| ||||||||| | |
Sbjct: 583 agagcttcccgaaaagcggtccccatgactgatagccgctgttgatcgcgtaggaggtac 524
Query: 563 cggcaacaacgccgaccaggttgatgatcaggatggtggtgggcgggatcagaagtgtcg 622
| || ||||| ||||| ||||||||||||| ||| || || || ||||||||||| ||||
Sbjct: 523 cagccacaacaccgacaaggttgatgatcaagatagttgttggtgggatcagaagagtcg 464
Query: 623 tccacttgaacatgtacagctccgcgaagtcgccgtcttcatccgaggccttggaggtga 682
|||||||||||||||| ||||| || || || ||||| || || || || || ||||
Sbjct: 463 tccacttgaacatgtagagctcggcaaaatcattatcttcgtcggatgcttttgaagtga 404
Query: 683 cggtgaagttggtgtcgatgccggcaagcaccttgaggaggccctggaagacggcgaaga 742
| |||||| ||||||||||||| ||||| ||||| ||||| || |||||||| || || |
Sbjct: 403 cagtgaagctggtgtcgatgccagcaagtaccttcaggagaccttggaagacagcaaaca 344
Query: 743 ggtgggcggagatgcctccgatgacccagaactgctcgttcctccaccactcgtcgatgc 802
| || || || || |||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 343 gatgtgcagaaatacctccgatgacccagaactgttcattcctccaccactcgtcgatgc 284
Query: 803 ccacgccgctccacctcatctccaggatacccgtggcgaagatcgagatgaagagagaga 862
| || ||||||||||||||||| |||||||| ||||| |||||||| || ||||||||||
Sbjct: 283 caacaccgctccacctcatctcaaggataccagtggcaaagatcgaaataaagagagaga 224
Query: 863 tgaaccagatactagcgaagttgctgatctctgggatgatgaacttccccgtgagcaggc 922
| ||||| ||||| || | |||||| |||| ||||||||||||||| |||||||| || |
Sbjct: 223 taaaccaaatactggcaatgttgctaatctgtgggatgatgaactttcccgtgagaagac 164
Query: 923 agatggcaggcaggatacagtaaatgaggagcgggagggacgtgagcgggtagatggtgg 982
| | || || | || ||||| |||||||| || | || ||||| || ||||| ||||
Sbjct: 163 aaacagctggtaatatgcagtatatgaggagtggtattgatgtgagtggatagatagtgg 104
Query: 983 tgttgatgtaggcgaatctctccaagaacttcaggcgtcctccgtagccgtaccataggg 1042
|||||||||| || |||||||||| ||| || || ||||| || ||||| ||||||| ||
Sbjct: 103 tgttgatgtaagcaaatctctccaggaatttaagccgtccgccatagccataccatatgg 44
Query: 1043 ggcaatgccggctgaaaaggatttccactgaacc 1076
| ||||||| |||||||| ||||||||||||||
Sbjct: 43 gacaatgcctactgaaaagaatttccactgaacc 10
>gb|AV925215.1|AV925215 AV925215 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd22e04 5', mRNA sequence
Length = 656
Score = 404 bits (204), Expect = e-111
Identities = 438/516 (84%)
Strand = Plus / Minus
Query: 370 cgaacccacagcaaggagaagatcgacgccagcaggatcgcccagacaaccacgatggtc 429
||||||||||||||||||||||| || ||||| |||| |||||||| | || || |||
Sbjct: 625 cgaacccacagcaaggagaagattgaagccaggaggacagcccagacgatgacaatcgtc 566
Query: 430 ggggtgcggttctgccgacccatgagacccttgaggaacgggtacaggtgaacgatcacc 489
|| |||||||| |||| ||||| |||||||||||||| ||||| | |||||| ||||||
Sbjct: 565 ggtgtgcggttttgcctgcccataagacccttgaggaaggggtataagtgaacaatcacc 506
Query: 490 cagaaggcgaagaagagcttgccgaagagcggaccccacgactggtacccgctgttgatg 549
|||||||| ||||||||||| ||||||||||| ||||| || ||||| || |||||||||
Sbjct: 505 cagaaggcaaagaagagcttcccgaagagcggcccccaagattggtaaccactgttgatg 446
Query: 550 gcgtaggagatgccggcaacaacgccgaccaggttgatgatcaggatggtggtgggcggg 609
||||||||| | || ||||| || ||||||| ||| ||||||| |||||| || || |||
Sbjct: 445 gcgtaggaggtaccagcaacgacaccgaccatgttaatgatcaagatggtcgtcggaggg 386
Query: 610 atcagaagtgtcgtccacttgaacatgtacagctccgcgaagtcgccgtcttcatccgag 669
|| ||||| |||||||||||||||||||| ||||| || |||||||| ||||| ||
Sbjct: 385 atgagaagcgtcgtccacttgaacatgtagagctcagcaaagtcgccttcttcgtcatta 326
Query: 670 gccttggaggtgacggtgaagttggtgtcgatgccggcaagcaccttgaggaggccctgg 729
||||| |||||||| ||||||||||||||||| |||||||||||||| || || |||||
Sbjct: 325 gcctttgaggtgacagtgaagttggtgtcgataccggcaagcaccttcagaagaccctga 266
Query: 730 aagacggcgaagaggtgggcggagatgcctccgatgacccagaactgctcgttcctccac 789
|||||||| || || ||||| ||||| ||||| |||||||||||||| || |||||||||
Sbjct: 265 aagacggcaaacagatgggcagagatacctccaatgacccagaactgttcattcctccac 206
Query: 790 cactcgtcgatgcccacgccgctccacctcatctccaggatacccgtggcgaagatcgag 849
|||||||| ||||| || || |||||||||||||| |||||||| ||||| || || ||
Sbjct: 205 cactcgtcaatgccaacaccactccacctcatctcaaggataccggtggcaaaaattgaa 146
Query: 850 atgaagagagagatgaaccagatactagcgaagttg 885
| |||||||| |||||||||||||| || ||||||
Sbjct: 145 aggaagagagcaatgaaccagatactggccaagttg 110
>gb|BI776485.2|BI776485 EBpi05_SQ001_J01_R pistil, 8 DPA, no treatment, cv Optic, EBpi05
Hordeum vulgare subsp. vulgare cDNA clone
EBpi05_SQ001_J01 5', mRNA sequence
Length = 518
Score = 402 bits (203), Expect = e-110
Identities = 437/515 (84%)
Strand = Plus / Minus
Query: 310 cagttgatgccacacgttcgagtatccgggccagtgacgcgggtggtgaacggatcgatg 369
||||||||||||||| || | |||| || |||||||| || ||||||||||| ||||||
Sbjct: 518 cagttgatgccacacatttggatatctggcccagtgactcgtgtggtgaacgggtcgatg 459
Query: 370 cgaacccacagcaaggagaagatcgacgccagcaggatcgcccagacaaccacgatggtc 429
||||||||||||||||||||||| || || || ||||| |||||||| || |||||||||
Sbjct: 458 cgaacccacagcaaggagaagatggatgcaagaaggatggcccagacgacaacgatggtc 399
Query: 430 ggggtgcggttctgccgacccatgagacccttgaggaacgggtacaggtgaacgatcacc 489
|| |||||||||||||| ||||| || ||||||||||| ||||||| ||| | ||||||
Sbjct: 398 ggcgtgcggttctgccgtcccattagccccttgaggaatgggtacaagtggataatcacc 339
Query: 490 cagaaggcgaagaagagcttgccgaagagcggaccccacgactggtacccgctgttgatg 549
|||||||| ||||||||||| ||||| ||||| ||||| ||||| || |||||||||||
Sbjct: 338 cagaaggcaaagaagagcttcccgaaaagcggtccccatgactgatagccgctgttgatc 279
Query: 550 gcgtaggagatgccggcaacaacgccgaccaggttgatgatcaggatggtggtgggcggg 609
||||||||| | || || ||||| ||||| ||||||||||||| ||| || || || |||
Sbjct: 278 gcgtaggaggtaccagccacaacaccgacaaggttgatgatcaagatagttgttggtggg 219
Query: 610 atcagaagtgtcgtccacttgaacatgtacagctccgcgaagtcgccgtcttcatccgag 669
|||||||| |||||||||||||||||||| ||||| || || || ||||| || ||
Sbjct: 218 atcagaagagtcgtccacttgaacatgtagagctcggcaaaatcattatcttcgtcggat 159
Query: 670 gccttggaggtgacggtgaagttggtgtcgatgccggcaagcaccttgaggaggccctgg 729
|| || || ||||| |||||| ||||||||||||| ||||| ||||| ||||| || |||
Sbjct: 158 gcttttgaagtgacagtgaagctggtgtcgatgccagcaagtaccttcaggagaccttgg 99
Query: 730 aagacggcgaagaggtgggcggagatgcctccgatgacccagaactgctcgttcctccac 789
||||| || || || || || || || |||||||||||||||||||| || |||||||||
Sbjct: 98 aagacagcaaacagatgtgcagaaatacctccgatgacccagaactgttcattcctccac 39
Query: 790 cactcgtcgatgcccacgccgctccacctcatctc 824
|||||||||||||| || |||||||||||||||||
Sbjct: 38 cactcgtcgatgccaacaccgctccacctcatctc 4
>gb|BQ739972.1|BQ739972 HB107G12 HB Hordeum vulgare subsp. vulgare cDNA clone HB107G12
similar to (AF200533) cellulose synthase-9 [Zea mays],
mRNA sequence
Length = 623
Score = 400 bits (202), Expect = e-109
Identities = 418/490 (85%)
Strand = Plus / Minus
Query: 746 gggcggagatgcctccgatgacccagaactgctcgttcctccaccactcgtcgatgccca 805
|||| ||||| ||||| |||||||||||||| || |||||||||| || ||| ||||| |
Sbjct: 493 gggcagagatacctccaatgacccagaactgttctttcctccacccctggtcaatgccaa 434
Query: 806 cgccgctccacctcatctccaggatacccgtggcgaagatcgagatgaagagagagatga 865
| || ||||||||||| || || |||| |||| || || || | |||||||| ||||
Sbjct: 433 caccactccacctcatttcaagattaccgttggcaaaaattgaaaggaagagagcaatga 374
Query: 866 accagatactagcgaagttgctgatctctgggatgatgaacttccccgtgagcaggcaga 925
|||||||||| || |||||||| |||||||| ||||||||||| || ||||||| ||||
Sbjct: 373 accagatactggccaagttgctaatctctggcatgatgaactttccagtgagcaaacaga 314
Query: 926 tggcaggcaggatacagtaaatgaggagcgggagggacgtgagcgggtagatggtggtgt 985
| ||||||| ||||| || | || |||||||| ||||| || ||||| ||||||||||
Sbjct: 313 tagcaggcaatatacaatagactagaagcgggagagacgttagtgggtaaatggtggtgt 254
Query: 986 tgatgtaggcgaatctctccaagaacttcaggcgtcctccgtagccgtaccatagggggc 1045
||||||| ||||||||||||| |||||| ||||| |||| |||||| ||||||| |||||
Sbjct: 253 tgatgtaagcgaatctctccaggaacttgaggcgccctcggtagccataccataaggggc 194
Query: 1046 aatgccggctgaaaaggatttccactgaaccgagagcccaccggagcacctggttcagac 1105
|||||||||||||||| ||||| || ||||| ||||||||||||||||| ||||||||||
Sbjct: 193 aatgccggctgaaaagaatttcaacggaaccaagagcccaccggagcacttggttcagac 134
Query: 1106 ggtctgagagattgatgggagccgatcccttgaaggccggccgcttaggcatgcagtaga 1165
| ||||| ||||||||||| || ||||||||||| || || |||||||||||||| ||||
Sbjct: 133 gatctgaaagattgatgggggcagatcccttgaaagctgggcgcttaggcatgcaataga 74
Query: 1166 tcgaccgccagcctcgtgcgtgcatcttgaacccagtgagaatatcttccgtcacagaac 1225
||||||||||||| ||||||||||||||| ||||||||||||||||| || ||||| |
Sbjct: 73 ctgaccgccagcctcttgcgtgcatcttgaatccagtgagaatatcttctgtgacagatc 14
Query: 1226 catagatcca 1235
|||| |||||
Sbjct: 13 cataaatcca 4
>gb|AV926207.1|AV926207 AV926207 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp. vulgare
cDNA clone basd18i05 5', mRNA sequence
Length = 668
Score = 394 bits (199), Expect = e-108
Identities = 545/659 (82%), Gaps = 1/659 (0%)
Strand = Plus / Minus
Query: 499 aagaagagcttgccgaagagcggaccccacgactggtacccgctgttgatggcgtaggag 558
||||||||||| ||||| ||||| ||||| ||||| || ||| ||||||| |||||||||
Sbjct: 664 aagaagagcttcccgaaaagcggtccccatgactgatagccgatgttgatcgcgtaggag 605
Query: 559 atgccggcaacaacgccgaccaggttgatgatcaggatggtggtgggcgggatcagaagt 618
| || || ||||| ||||| ||||||||||||| ||| || || || |||||||||||
Sbjct: 604 gtaccagccacaacaccgacaaggttgatgatcaagatagttgttggtgggatcagaaga 545
Query: 619 gtcgtccacttgaacatgtacagctccgcgaagtcgccgtcttcatccgaggccttggag 678
|||||||||||||||||||| ||||| || || || ||||| || || || || ||
Sbjct: 544 gtcgtccacttgaacatgtagagctcggcaaaatcattatcttcgtcggatgcttttgaa 485
Query: 679 gtgacggtgaagttggtgtcgatgccggcaagcaccttgaggaggccctggaagacggcg 738
||||| |||||| ||||||||||||| ||||| ||||| ||||| || |||||||| ||
Sbjct: 484 gtgacagtgaagctggtgtcgatgccagcaagtaccttcaggagaccttggaagacagca 425
Query: 739 aagaggtgggcggagatgcctccgatgacccagaactgctcgttcctccaccactcgtcg 798
|| || || || || || |||||||||||||||||||| || ||||||||||||||||||
Sbjct: 424 aacagatgtgcagaaatacctccgatgacccagaactgttcattcctccaccactcgtcg 365
Query: 799 atgcccacgccgctccacctcatctccaggatacccgtggcgaagatcgagatgaagaga 858
||||| || ||||||||||||||||| |||||||| ||||| |||||||| || ||||||
Sbjct: 364 atgccaacaccgctccacctcatctcaaggataccagtggcaaagatcgaaataaagaga 305
Query: 859 gagatgaaccagatactagcgaagttgctgatctctgggatgatgaacttccccgtgagc 918
||||| ||||| ||||| || | |||||| |||| ||||||||||||||| ||||||||
Sbjct: 304 gagataaaccaaatactggcaatgttgctaatctgtgggatgatgaactttcccgtgaga 245
Query: 919 aggcagatggcaggcaggatacagtaaatgaggagcgggagggacgtgagcgggtagatg 978
|| || | || || | || ||||| |||||||| || | || ||||| || |||||
Sbjct: 244 agacaaacagctggtaatatgcagtatatgaggagtggtattgatgtgagtggatagata 185
Query: 979 gtggtgttgatgtaggcgaatctctccaagaacttcaggcgtcctccgtagccgtaccat 1038
|||||||||||||| || |||||||||| ||| || || ||||| || ||||| ||||||
Sbjct: 184 gtggtgttgatgtaagcaaatctctccaggaatttaagccgtccgccatagccataccat 125
Query: 1039 agggggcaatgccggctgaaaaggatttccactgaaccgagagcccaccggagcacctgg 1098
| ||| ||||||| |||||||| |||||||||||||| || |||||||| ||||| ||
Sbjct: 124 atgggacaatgcctactgaaaagaatttccactgaaccaagcgcccaccgaagcacttga 65
Query: 1099 ttcagacggtctgagagattgatgggagccgatcccttgaaggccggccgcttaggcat 1157
|||||||| ||||| || ||||| || || || |||||||| | ||| |||||||||||
Sbjct: 64 ttcagacgatctgaaaggttgataggggcagagcccttgaaag-cggtcgcttaggcat 7
>gb|CB860194.1|CB860194 HI12P13w HI Hordeum vulgare subsp. vulgare cDNA clone HI12P13
3-PRIME, mRNA sequence
Length = 651
Score = 387 bits (195), Expect = e-105
Identities = 423/499 (84%)
Strand = Plus / Plus
Query: 305 cctagcagttgatgccacacgttcgagtatccgggccagtgacgcgggtggtgaacggat 364
|||||||||||||||||||| || | |||| || |||||||| || ||||||||||| |
Sbjct: 150 cctagcagttgatgccacacatttggatatctggcccagtgactcgtgtggtgaacgggt 209
Query: 365 cgatgcgaacccacagcaaggagaagatcgacgccagcaggatcgcccagacaaccacga 424
|||||||||||||||||||||||||||| || || || ||||| |||||||| || ||||
Sbjct: 210 cgatgcgaacccacagcaaggagaagatggatgcaagaaggatggcccagacgacaacga 269
Query: 425 tggtcggggtgcggttctgccgacccatgagacccttgaggaacgggtacaggtgaacga 484
||||||| |||||||||||||| ||||| || ||||||||||| ||||||| ||| | |
Sbjct: 270 tggtcggcgtgcggttctgccgtcccattagccccttgaggaatgggtacaagtggataa 329
Query: 485 tcacccagaaggcgaagaagagcttgccgaagagcggaccccacgactggtacccgctgt 544
||||||||||||| ||||||||||| ||||| ||||| ||||| ||||| || |||||||
Sbjct: 330 tcacccagaaggcaaagaagagcttcccgaaaagcggtccccatgactgatagccgctgt 389
Query: 545 tgatggcgtaggagatgccggcaacaacgccgaccaggttgatgatcaggatggtggtgg 604
|||| ||||||||| | || || ||||| ||||| ||||||||||||| ||| || || |
Sbjct: 390 tgatcgcgtaggaggtaccagccacaacaccgacaaggttgatgatcaagatagttgttg 449
Query: 605 gcgggatcagaagtgtcgtccacttgaacatgtacagctccgcgaagtcgccgtcttcat 664
| ||||||||||| |||||||||||||||||||| ||||| || || || ||||| |
Sbjct: 450 gtgggatcagaagagtcgtccacttgaacatgtagagctcggcaaaatcattatcttcgt 509
Query: 665 ccgaggccttggaggtgacggtgaagttggtgtcgatgccggcaagcaccttgaggaggc 724
| || || || || ||||| |||||| ||||||||||||| ||||| ||||| ||||| |
Sbjct: 510 cggatgcttttgaagtgacagtgaagctggtgtcgatgccagcaagtaccttcaggagac 569
Query: 725 cctggaagacggcgaagaggtgggcggagatgcctccgatgacccagaactgctcgttcc 784
| |||||||| || || || || || || || |||||||||||||||||||| || ||||
Sbjct: 570 cttggaagacagcaaacagatgtgcagaaatacctccgatgacccagaactgttcattcc 629
Query: 785 tccaccactcgtcgatgcc 803
|||||||||||||||||||
Sbjct: 630 tccaccactcgtcgatgcc 648
>gb|AV931092.1|AV931092 AV931092 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd18i05 3', mRNA sequence
Length = 658
Score = 383 bits (193), Expect = e-104
Identities = 430/509 (84%)
Strand = Plus / Plus
Query: 305 cctagcagttgatgccacacgttcgagtatccgggccagtgacgcgggtggtgaacggat 364
|||||||||||||||||||| || | |||| || |||||||| || ||||||||||| |
Sbjct: 150 cctagcagttgatgccacacatttggatatctggcccagtgactcgtgtggtgaacgggt 209
Query: 365 cgatgcgaacccacagcaaggagaagatcgacgccagcaggatcgcccagacaaccacga 424
|||||||||||||||||||||||||||| || || || ||||| |||||||| || ||||
Sbjct: 210 cgatgcgaacccacagcaaggagaagatggatgcaagaaggatggcccagacgacaacga 269
Query: 425 tggtcggggtgcggttctgccgacccatgagacccttgaggaacgggtacaggtgaacga 484
||||||| |||||||||||||| ||||| || ||||||||||| ||||||| ||| | |
Sbjct: 270 tggtcggcgtgcggttctgccgtcccattagccccttgaggaatgggtacaagtggataa 329
Query: 485 tcacccagaaggcgaagaagagcttgccgaagagcggaccccacgactggtacccgctgt 544
||||||||||||| ||||||||||| ||||| ||||| ||||| ||||| || ||| |||
Sbjct: 330 tcacccagaaggcaaagaagagcttcccgaaaagcggtccccatgactgatagccgatgt 389
Query: 545 tgatggcgtaggagatgccggcaacaacgccgaccaggttgatgatcaggatggtggtgg 604
|||| ||||||||| | || || ||||| ||||| ||||||||||||| ||| || || |
Sbjct: 390 tgatcgcgtaggaggtaccagccacaacaccgacaaggttgatgatcaagatagttgttg 449
Query: 605 gcgggatcagaagtgtcgtccacttgaacatgtacagctccgcgaagtcgccgtcttcat 664
| ||||||||||| |||||||||||||||||||| ||||| || || || ||||| |
Sbjct: 450 gtgggatcagaagagtcgtccacttgaacatgtagagctcggcaaaatcattatcttcgt 509
Query: 665 ccgaggccttggaggtgacggtgaagttggtgtcgatgccggcaagcaccttgaggaggc 724
| || || || || ||||| |||||| ||||||||||||| ||||| ||||| ||||| |
Sbjct: 510 cggatgcttttgaagtgacagtgaagctggtgtcgatgccagcaagtaccttcaggagac 569
Query: 725 cctggaagacggcgaagaggtgggcggagatgcctccgatgacccagaactgctcgttcc 784
| |||||||| || || || || || || || |||||||||||||||||||| || ||||
Sbjct: 570 cttggaagacagcaaacagatgtgcagaaatacctccgatgacccagaactgttcattcc 629
Query: 785 tccaccactcgtcgatgcccacgccgctc 813
||||||||||||||||||| || ||||||
Sbjct: 630 tccaccactcgtcgatgccaacaccgctc 658
>gb|BU967242.1|BU967242 HB03K11r BC Hordeum vulgare subsp. vulgare cDNA clone HB03K11
5-PRIME, mRNA sequence
Length = 577
Score = 383 bits (193), Expect = e-104
Identities = 421/497 (84%)
Strand = Plus / Minus
Query: 305 cctagcagttgatgccacacgttcgagtatccgggccagtgacgcgggtggtgaacggat 364
|||||||||||||||||||| || | |||| || |||||||| || ||||||||||| |
Sbjct: 517 cctagcagttgatgccacacatttggatatctggcccagtgactcgtgtggtgaacgggt 458
Query: 365 cgatgcgaacccacagcaaggagaagatcgacgccagcaggatcgcccagacaaccacga 424
|||||||||||||||||||||||||||| || || || ||||| |||||||| || ||||
Sbjct: 457 cgatgcgaacccacagcaaggagaagatggatgcaagaaggatggcccagacgacaacga 398
Query: 425 tggtcggggtgcggttctgccgacccatgagacccttgaggaacgggtacaggtgaacga 484
||||||| |||||||||||||| ||||| || ||||||||||| ||||||| ||| | |
Sbjct: 397 tggtcggcgtgcggttctgccgtcccattagccccttgaggaatgggtacaagtggataa 338
Query: 485 tcacccagaaggcgaagaagagcttgccgaagagcggaccccacgactggtacccgctgt 544
||||||||||||| ||||||||||| ||||| ||||| ||||| ||||| || |||||||
Sbjct: 337 tcacccagaaggcaaagaagagcttcccgaaaagcggtccccatgactgatagccgctgt 278
Query: 545 tgatggcgtaggagatgccggcaacaacgccgaccaggttgatgatcaggatggtggtgg 604
|||| ||||||||| | || || ||||| ||||| ||||||||||||| ||| || || |
Sbjct: 277 tgatcgcgtaggaggtaccagccacaacaccgacaaggttgatgatcaagatagttgttg 218
Query: 605 gcgggatcagaagtgtcgtccacttgaacatgtacagctccgcgaagtcgccgtcttcat 664
| ||||||||||| |||||||||||||||||||| ||||| || || || ||||| |
Sbjct: 217 gtgggatcagaagagtcgtccacttgaacatgtagagctcggcaaaatcattatcttcgt 158
Query: 665 ccgaggccttggaggtgacggtgaagttggtgtcgatgccggcaagcaccttgaggaggc 724
| || || || || ||||| |||||| ||||||||||||| ||||| ||||| ||||| |
Sbjct: 157 cggatgcttttgaagtgacagtgaagctggtgtcgatgccagcaagtaccttcaggagac 98
Query: 725 cctggaagacggcgaagaggtgggcggagatgcctccgatgacccagaactgctcgttcc 784
| |||||||| || || || || || || || |||||||||||||||||||| || ||||
Sbjct: 97 cttggaagacagcaaacagatgtgcagaaatacctccgatgacccagaactgttcattcc 38
Query: 785 tccaccactcgtcgatg 801
|||||||||||||||||
Sbjct: 37 tccaccactcgtcgatg 21
>gb|AV931093.1|AV931093 AV931093 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd18i06 3', mRNA sequence
Length = 658
Score = 379 bits (191), Expect = e-103
Identities = 422/499 (84%)
Strand = Plus / Plus
Query: 305 cctagcagttgatgccacacgttcgagtatccgggccagtgacgcgggtggtgaacggat 364
|||||||||||||||||||| || | |||| || |||||||| || ||||||||||| |
Sbjct: 157 cctagcagttgatgccacacatttggatatctggcccagtgactcgtgtggtgaacgggt 216
Query: 365 cgatgcgaacccacagcaaggagaagatcgacgccagcaggatcgcccagacaaccacga 424
|||||||||||||||||||||||||||| || || || ||||| |||||||| || ||||
Sbjct: 217 cgatgcgaacccacagcaaggagaagatggatgcaagaaggatggcccagacgacaacga 276
Query: 425 tggtcggggtgcggttctgccgacccatgagacccttgaggaacgggtacaggtgaacga 484
||||||| |||||||||||||| ||||| || ||||||||||| ||||||| ||| | |
Sbjct: 277 tggtcggcgtgcggttctgccgtcccattagccccttgaggaatgggtacaagtggataa 336
Query: 485 tcacccagaaggcgaagaagagcttgccgaagagcggaccccacgactggtacccgctgt 544
||||||||||||| ||||||||||| ||||| ||||| ||||| ||||| || ||| |||
Sbjct: 337 tcacccagaaggcaaagaagagcttcccgaaaagcggtccccatgactgatagccgatgt 396
Query: 545 tgatggcgtaggagatgccggcaacaacgccgaccaggttgatgatcaggatggtggtgg 604
|||| ||||||||| | || || ||||| ||||| ||||||||||||| ||| || || |
Sbjct: 397 tgatcgcgtaggaggtaccagccacaacaccgacaaggttgatgatcaagatagttgttg 456
Query: 605 gcgggatcagaagtgtcgtccacttgaacatgtacagctccgcgaagtcgccgtcttcat 664
| ||||||||||| |||||||||||||||||||| ||||| || || || ||||| |
Sbjct: 457 gtgggatcagaagagtcgtccacttgaacatgtagagctcggcaaaatcattatcttcgt 516
Query: 665 ccgaggccttggaggtgacggtgaagttggtgtcgatgccggcaagcaccttgaggaggc 724
| || || || || ||||| |||||| ||||||||||||| ||||| ||||| ||||| |
Sbjct: 517 cggatgcttttgaagtgacagtgaagctggtgtcgatgccagcaagtaccttcaggagac 576
Query: 725 cctggaagacggcgaagaggtgggcggagatgcctccgatgacccagaactgctcgttcc 784
| |||||||| || || || || || || || |||||||||||||||||||| || ||||
Sbjct: 577 cttggaagacagcaaacagatgtgcagaaatacctccgatgacccagaactgttcattcc 636
Query: 785 tccaccactcgtcgatgcc 803
|||||||||||||||||||
Sbjct: 637 tccaccactcgtcgatgcc 655
>gb|BU990492.1|BU990492 HF25D10r HF Hordeum vulgare subsp. vulgare cDNA clone HF25D10
5-PRIME, mRNA sequence
Length = 621
Score = 367 bits (185), Expect = 2e-099
Identities = 431/513 (84%)
Strand = Plus / Minus
Query: 305 cctagcagttgatgccacacgttcgagtatccgggccagtgacgcgggtggtgaacggat 364
||||||||||||||||||| ||| | ||| ||||||| || || || ||||| ||||
Sbjct: 522 cctagcagttgatgccacaggtttggatatttgggccagcgagacgtgtagtgaatggat 463
Query: 365 cgatgcgaacccacagcaaggagaagatcgacgccagcaggatcgcccagacaaccacga 424
| | ||||||||||||||||||||||| || ||||| |||| |||||||| | || |
Sbjct: 462 caacacgaacccacagcaaggagaagattgaagccaggaggacagcccagacgatgacaa 403
Query: 425 tggtcggggtgcggttctgccgacccatgagacccttgaggaacgggtacaggtgaacga 484
| ||||| |||||||| |||| ||||| |||||||||||||| ||||| | |||||| |
Sbjct: 402 tcgtcggtgtgcggttttgcctgcccataagacccttgaggaaggggtataagtgaacaa 343
Query: 485 tcacccagaaggcgaagaagagcttgccgaagagcggaccccacgactggtacccgctgt 544
||||||||||||| ||||||||||| ||||||||||| ||||| || ||||| || ||||
Sbjct: 342 tcacccagaaggcaaagaagagcttcccgaagagcggcccccaagattggtaaccactgt 283
Query: 545 tgatggcgtaggagatgccggcaacaacgccgaccaggttgatgatcaggatggtggtgg 604
|||||||||||||| | || ||||| || ||||||| ||| ||||||| |||||| || |
Sbjct: 282 tgatggcgtaggaggtaccagcaacgacaccgaccatgttaatgatcaagatggtcgtcg 223
Query: 605 gcgggatcagaagtgtcgtccacttgaacatgtacagctccgcgaagtcgccgtcttcat 664
| ||||| ||||| |||||||||||||||||||| ||||| || |||||||| ||||| |
Sbjct: 222 gagggatgagaagcgtcgtccacttgaacatgtagagctcagcaaagtcgccttcttcgt 163
Query: 665 ccgaggccttggaggtgacggtgaagttggtgtcgatgccggcaagcaccttgaggaggc 724
| ||||| |||||||| ||||||||||||||||| |||||||||||||| || || |
Sbjct: 162 cattagcctttgaggtgacagtgaagttggtgtcgataccggcaagcaccttcagaagac 103
Query: 725 cctggaagacggcgaagaggtgggcggagatgcctccgatgacccagaactgctcgttcc 784
|||| |||||||| || || ||||| ||||| ||||| |||||||||||||| || ||||
Sbjct: 102 cctgaaagacggcaaacagatgggcagagatacctccaatgacccagaactgttcattcc 43
Query: 785 tccaccactcgtcgatgcccacgccgctccacc 817
||||||||||||| ||||| || || |||||||
Sbjct: 42 tccaccactcgtcaatgccaacaccactccacc 10
>gb|BJ464018.1|BJ464018 BJ464018 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags31h15 5', mRNA sequence
Length = 419
Score = 359 bits (181), Expect = 4e-097
Identities = 358/416 (86%), Gaps = 1/416 (0%)
Strand = Plus / Minus
Query: 763 atgacccagaactgctcgttcctccaccactcgtcgatgcccacgccgctccacctcatc 822
|||||||||||||| || ||||||||||||||||| ||||| || || ||||||||||||
Sbjct: 416 atgacccagaactgttcattcctccaccactcgtcaatgccaacaccactccacctcatc 357
Query: 823 tccaggatacccgtggcgaagatcgagatgaagagagagatgaaccagatactagcgaag 882
|| |||||||| ||||| || || || | |||||||| ||||||||||| || || |||
Sbjct: 356 tcaaggataccggtggcaaaaattgaaaggaagagagcaatgaaccagatnctggccaag 297
Query: 883 ttgctgatctctgggatgatgaacttccccgtgagcaggcagatggcaggcaggatacag 942
||||| |||||||| ||||||||||| || ||||||| ||||| ||||||| |||||
Sbjct: 296 ttgctaatctctggcatgatgaactttccagtgagcaaacagatagcaggcaatatacaa 237
Query: 943 taaatgaggagcgggagggacgtgagcgggtagatggtggtgttgatgtaggcgaatctc 1002
|| | || |||||||| ||||| || ||||| ||||||||||||||||| |||||||||
Sbjct: 236 tagactagaagcgggagagacgttagtgggtaaatggtggtgttgatgtaagcgaatctc 177
Query: 1003 t-ccaagaacttcaggcgtcctccgtagccgtaccatagggggcaatgccggctgaaaag 1061
| ||| |||||| ||||| ||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 176 tcccaggaacttgaggcgccctccgtagccataccataaggggcaatgccggctgaaaag 117
Query: 1062 gatttccactgaaccgagagcccaccggagcacctggttcagacggtctgagagattgat 1121
||||| || ||||| ||||||||||||||||| ||||||||||| ||||| ||||||||
Sbjct: 116 aatttcaacggaaccaagagcccaccggagcacttggttcagacgatctgaaagattgat 57
Query: 1122 gggagccgatcccttgaaggccggccgcttaggcatgcagtagatcgaccgccagc 1177
||| || ||||||||||| || || |||||||||||||| |||| ||||||||||
Sbjct: 56 gggggcagatcccttgaaagctgggcgcttaggcatgcaatagactgaccgccagc 1
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 382,940
Number of Sequences: 312970
Number of extensions: 382940
Number of successful extensions: 110093
Number of sequences better than 0.5: 184
Number of HSP's better than 0.5 without gapping: 183
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 109566
Number of HSP's gapped (non-prelim): 414
length of query: 3782
length of database: 175,134,539
effective HSP length: 20
effective length of query: 3762
effective length of database: 168,875,139
effective search space: 635308272918
effective search space used: 635308272918
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)