BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2440918.2.1
(1469 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BE455929.2|BE455929 HVSMEg0017J22f Hordeum vulgare pre-a... 228 4e-058
gb|BM372726.2|BM372726 EBpi05_SQ003_M06_R pistil, 8 DPA, no... 153 2e-035
gb|BU998458.1|BU998458 HI11C02r HI Hordeum vulgare subsp. v... 100 3e-019
gb|BU998705.1|BU998705 HI11O16r HI Hordeum vulgare subsp. v... 100 3e-019
gb|CA029763.1|CA029763 HX05C10r HX Hordeum vulgare subsp. v... 100 3e-019
gb|CK125378.1|CK125378 BES1824107n11 BES1824 Hordeum vulgar... 100 3e-019
gb|CK124503.1|CK124503 BES1824109g06 BES1824 Hordeum vulgar... 90 2e-016
gb|AL507993.1|AL507993 AL507993 Hordeum vulgare Barke devel... 84 2e-014
gb|BI779458.2|BI779458 EBro01_SQ004_B16_R root, 3 week, hyd... 84 2e-014
gb|BU994276.1|BU994276 HM06H06r HM Hordeum vulgare subsp. v... 84 2e-014
gb|CB882315.1|CB882315 HL01I08w HL Hordeum vulgare subsp. v... 84 2e-014
gb|BQ461135.1|BQ461135 HE01C07r HE Hordeum vulgare subsp. v... 82 6e-014
gb|BF627946.2|BF627946 HVSMEb0006O05f Hordeum vulgare seedl... 74 1e-011
gb|BG300276.1|BG300276 HVSMEb0011O12f Hordeum vulgare seedl... 74 1e-011
gb|BF616802.2|BF616802 HVSMEc0012M16f Hordeum vulgare seedl... 74 1e-011
gb|BF620372.2|BF620372 HVSMEc0019K08f Hordeum vulgare seedl... 74 1e-011
gb|BF261063.2|BF261063 HVSMEf0023K15f Hordeum vulgare seedl... 74 1e-011
gb|BM374908.1|BM374908 EBma05_SQ003_I04_R maternal, 12 DPA,... 74 1e-011
gb|BQ468840.1|BQ468840 HM02H24r HM Hordeum vulgare subsp. v... 74 1e-011
gb|BI778693.2|BI778693 EBro01_SQ001_B17_R root, 3 week, hyd... 74 1e-011
gb|BM442793.2|BM442793 EBro02_SQ001_E08_R root, 3 week, hyd... 74 1e-011
gb|BQ766290.1|BQ766290 EBro08_SQ005_F15_R root, 3 week, dro... 74 1e-011
gb|BQ766361.1|BQ766361 EBro08_SQ005_C23_R root, 3 week, dro... 74 1e-011
gb|BQ767861.1|BQ767861 EBro08_SQ010_E03_R root, 3 week, dro... 74 1e-011
gb|CA020728.1|CA020728 HZ37G15r HZ Hordeum vulgare subsp. v... 74 1e-011
gb|BF625705.2|BF625705 HVSMEa0013F06f Hordeum vulgare seedl... 72 6e-011
gb|BF253465.2|BF253465 HVSMEf0001H23f Hordeum vulgare seedl... 72 6e-011
gb|BQ460256.1|BQ460256 HA06M17r HA Hordeum vulgare subsp. v... 72 6e-011
gb|BM097476.2|BM097476 EBro05_SQ003_K09_R root, 3 week, red... 72 6e-011
gb|BQ763624.1|BQ763624 EBro02_SQ008_P23_R root, 3 week, hyd... 72 6e-011
gb|BU994792.1|BU994792 HM08D11r HM Hordeum vulgare subsp. v... 72 6e-011
gb|AL504856.1|AL504856 AL504856 Hordeum vulgare Barke roots... 70 2e-010
gb|BF259479.2|BF259479 HVSMEf0019D14f Hordeum vulgare seedl... 70 2e-010
gb|BM442969.2|BM442969 EBro02_SQ002_B10_R root, 3 week, hyd... 70 2e-010
gb|BM443023.2|BM443023 EBro02_SQ002_D14_R root, 3 week, hyd... 70 2e-010
gb|CA026596.1|CA026596 HZ56F22r HZ Hordeum vulgare subsp. v... 70 2e-010
gb|BF621307.2|BF621307 HVSMEa0006G23f Hordeum vulgare seedl... 68 9e-010
gb|BE603249.2|BE603249 HVSMEh0102L21f Hordeum vulgare 5-45 ... 68 9e-010
gb|BQ462734.1|BQ462734 HI01N15T HI Hordeum vulgare subsp. v... 68 9e-010
gb|CA017409.1|CA017409 HV05B23r HV Hordeum vulgare subsp. v... 68 9e-010
gb|CB878393.1|CB878393 HP08G07T HP Hordeum vulgare subsp. v... 68 9e-010
gb|BF626945.1|BF626945 HVSMEb0001M09f Hordeum vulgare seedl... 66 4e-009
gb|BF261118.2|BF261118 HVSMEf0023M22f Hordeum vulgare seedl... 66 4e-009
gb|BG367841.1|BG367841 HVSMEi0013O18f Hordeum vulgare 20 DA... 66 4e-009
gb|BI950074.1|BI950074 HVSMEl0018F18f Hordeum vulgare spike... 66 4e-009
gb|BG417113.2|BG417113 HVSMEk0016F06f Hordeum vulgare testa... 66 4e-009
gb|AL509011.1|AL509011 AL509011 Hordeum vulgare Barke devel... 64 1e-008
gb|BF628685.2|BF628685 HVSMEb0007A23f Hordeum vulgare seedl... 64 1e-008
gb|BG301055.1|BG301055 HVSMEb0019H01f Hordeum vulgare seedl... 64 1e-008
gb|BF619877.2|BF619877 HVSMEc0009I18f Hordeum vulgare seedl... 64 1e-008
gb|BI959702.1|BI959702 HVSMEn0020N23f Hordeum vulgare rachi... 64 1e-008
gb|BF256219.3|BF256219 HVSMEf0009C16f Hordeum vulgare seedl... 64 1e-008
gb|BQ459303.1|BQ459303 HA01J08r HA Hordeum vulgare subsp. v... 64 1e-008
gb|BI780646.2|BI780646 EBes01_SQ001_J21_R embryo sac, 4-6 D... 64 1e-008
gb|BI776795.2|BI776795 EBpi07_SQ001_M11_R pistil, 12 DPA, n... 64 1e-008
gb|BU978904.1|BU978904 HA14J15r HA Hordeum vulgare subsp. v... 64 1e-008
gb|BU981968.1|BU981968 HA25C05r HA Hordeum vulgare subsp. v... 64 1e-008
gb|BU982434.1|BU982434 HA26I17r HA Hordeum vulgare subsp. v... 64 1e-008
gb|BU983159.1|BU983159 HA28L21r HA Hordeum vulgare subsp. v... 64 1e-008
gb|BU983515.1|BU983515 HA29P18r HA Hordeum vulgare subsp. v... 64 1e-008
gb|CA032297.1|CA032297 HX12J19r HX Hordeum vulgare subsp. v... 64 1e-008
gb|AL503679.1|AL503679 AL503679 Hordeum vulgare Barke roots... 62 6e-008
gb|BF258381.2|BF258381 HVSMEf0015J04f Hordeum vulgare seedl... 62 6e-008
gb|BI777401.2|BI777401 EBro04_SQ001_B20_R root, 3 week, sal... 62 6e-008
gb|BU980781.1|BU980781 HA21K21r HA Hordeum vulgare subsp. v... 62 6e-008
gb|CA028711.1|CA028711 HZ63A13r HZ Hordeum vulgare subsp. v... 62 6e-008
gb|CB882018.1|CB882018 HM11J22w HM Hordeum vulgare subsp. v... 62 6e-008
gb|CK122110.1|CK122110 BES1824101h12 BES1824 Hordeum vulgar... 62 6e-008
gb|BI957348.1|BI957348 HVSMEn0009B12f Hordeum vulgare rachi... 60 2e-007
gb|BI958538.1|BI958538 HVSMEn0015H22f Hordeum vulgare rachi... 60 2e-007
gb|BI958706.1|BI958706 HVSMEn0016E19f Hordeum vulgare rachi... 60 2e-007
gb|BF263705.3|BF263705 HV_CEa0007H04f Hordeum vulgare seedl... 60 2e-007
gb|BU995865.1|BU995865 HM11J22r HM Hordeum vulgare subsp. v... 60 2e-007
gb|CA020951.1|CA020951 HZ38I21r HZ Hordeum vulgare subsp. v... 60 2e-007
gb|BF260557.2|BF260557 HVSMEf0022F06f Hordeum vulgare seedl... 58 9e-007
gb|BG368743.1|BG368743 HVSMEi0020H06f Hordeum vulgare 20 DA... 58 9e-007
gb|BE602254.3|BE602254 HVSMEh0098D17f Hordeum vulgare 5-45 ... 58 9e-007
gb|BG365659.2|BG365659 HVSMEi0003K04f Hordeum vulgare 20 DA... 58 9e-007
gb|BG369910.2|BG369910 HVSMEi0026I06f Hordeum vulgare 20 DA... 58 9e-007
gb|BQ460486.1|BQ460486 HA09G22r HA Hordeum vulgare subsp. v... 58 9e-007
gb|BQ462569.1|BQ462569 HI01F03T HI Hordeum vulgare subsp. v... 58 9e-007
gb|BQ462709.1|BQ462709 HI01M09T HI Hordeum vulgare subsp. v... 58 9e-007
gb|BQ465202.1|BQ465202 HU02O23r HU Hordeum vulgare subsp. v... 58 9e-007
gb|BQ465796.1|BQ465796 HU04L10r HU Hordeum vulgare subsp. v... 58 9e-007
gb|BQ471176.1|BQ471176 HV01F23T HV Hordeum vulgare subsp. v... 58 9e-007
gb|BI777125.2|BI777125 EBro03_SQ002_A24_R root, 3 week, wat... 58 9e-007
gb|BQ758522.1|BQ758522 EBma07_SQ002_C01_R maternal, 21 DPA,... 58 9e-007
gb|BU998025.1|BU998025 HI09M06r HI Hordeum vulgare subsp. v... 58 9e-007
gb|CA029975.1|CA029975 HX05L21r HX Hordeum vulgare subsp. v... 58 9e-007
gb|CV060511.1|CV060511 BNEL58h9 Barley EST endosperm librar... 58 9e-007
gb|CV060719.1|CV060719 BNEL60d4 Barley EST endosperm librar... 58 9e-007
gb|AL450807.1|AL450807 AL450807 Hordeum vulgare Barke etiol... 56 3e-006
gb|AL503342.1|AL503342 AL503342 Hordeum vulgare Barke roots... 56 3e-006
gb|AL503614.1|AL503614 AL503614 Hordeum vulgare Barke roots... 56 3e-006
gb|AL505521.1|AL505521 AL505521 Hordeum vulgare Barke roots... 56 3e-006
gb|BF260334.1|BF260334 HVSMEf0021L14f Hordeum vulgare seedl... 56 3e-006
gb|BF627148.2|BF627148 HVSMEb0004B06f Hordeum vulgare seedl... 56 3e-006
gb|BF254984.2|BF254984 HVSMEf0005J21f Hordeum vulgare seedl... 56 3e-006
gb|BF255149.2|BF255149 HVSMEf0006B11f Hordeum vulgare seedl... 56 3e-006
gb|BF258178.2|BF258178 HVSMEf0015A09f Hordeum vulgare seedl... 56 3e-006
gb|BF260130.2|BF260130 HVSMEf0021D01f Hordeum vulgare seedl... 56 3e-006
gb|BF263244.2|BF263244 HV_CEa0006D18f Hordeum vulgare seedl... 56 3e-006
gb|BF264659.2|BF264659 HV_CEa0010A08f Hordeum vulgare seedl... 56 3e-006
gb|BF265587.2|BF265587 HV_CEa0012L15f Hordeum vulgare seedl... 56 3e-006
gb|BF265694.2|BF265694 HV_CEa0013B11f Hordeum vulgare seedl... 56 3e-006
gb|BG417701.1|BG417701 HVSMEk0019C23f Hordeum vulgare testa... 56 3e-006
gb|BF255610.2|BF255610 HVSMEf0007F05f Hordeum vulgare seedl... 56 3e-006
gb|BF256962.3|BF256962 HVSMEf0011H20f Hordeum vulgare seedl... 56 3e-006
gb|BG366603.2|BG366603 HVSMEi0007J14f Hordeum vulgare 20 DA... 56 3e-006
gb|BG415623.2|BG415623 HVSMEk0007D11f Hordeum vulgare testa... 56 3e-006
gb|BF264663.3|BF264663 HV_CEa0010A12f Hordeum vulgare seedl... 56 3e-006
gb|BQ467946.1|BQ467946 HR01G22r HR Hordeum vulgare subsp. v... 56 3e-006
gb|BM377980.2|BM377980 EBem04_SQ004_M14_R embryo, 12 DPA, n... 56 3e-006
gb|BI781117.2|BI781117 EBma03_SQ001_H19_R maternal, 8 DPA, ... 56 3e-006
gb|BI778762.2|BI778762 EBro01_SQ001_G05_R root, 3 week, hyd... 56 3e-006
gb|BM370877.2|BM370877 EBro04_SQ002_K07_R root, 3 week, sal... 56 3e-006
gb|BI777969.2|BI777969 EBro07_SQ001_J07_R root, 3 week, red... 56 3e-006
gb|BQ762884.1|BQ762884 EBro02_SQ006_L12_R root, 3 week, hyd... 56 3e-006
gb|BQ763802.1|BQ763802 EBro03_SQ005_O11_R root, 3 week, wat... 56 3e-006
gb|BQ768438.1|BQ768438 EBro08_SQ011_P16_R root, 3 week, dro... 56 3e-006
gb|BU982210.1|BU982210 HA25N13r HA Hordeum vulgare subsp. v... 56 3e-006
gb|BU985389.1|BU985389 HF06P23r HF Hordeum vulgare subsp. v... 56 3e-006
gb|CA017431.1|CA017431 HV05C24r HV Hordeum vulgare subsp. v... 56 3e-006
gb|CA017478.1|CA017478 HV05F07r HV Hordeum vulgare subsp. v... 56 3e-006
gb|CA017585.1|CA017585 HV05K02r HV Hordeum vulgare subsp. v... 56 3e-006
gb|CA020040.1|CA020040 HV14C15r HV Hordeum vulgare subsp. v... 56 3e-006
gb|CB877065.1|CB877065 HP03H03T HP Hordeum vulgare subsp. v... 56 3e-006
gb|CB878214.1|CB878214 HP07L18T HP Hordeum vulgare subsp. v... 56 3e-006
gb|CB878922.1|CB878922 HP10E23T HP Hordeum vulgare subsp. v... 56 3e-006
gb|CB879728.1|CB879728 HP03H03w HP Hordeum vulgare subsp. v... 56 3e-006
gb|CB882520.1|CB882520 HL02B17w HL Hordeum vulgare subsp. v... 56 3e-006
gb|CK122651.1|CK122651 BES1824104o18 BES1824 Hordeum vulgar... 56 3e-006
gb|BE194057.1|BE194057 HVSMEh0083L15f Hordeum vulgare 5-45 ... 54 1e-005
gb|BG310052.1|BG310052 HVSMEc0016D09f Hordeum vulgare seedl... 54 1e-005
gb|BI954294.1|BI954294 HVSMEm0017A16f Hordeum vulgare green... 54 1e-005
gb|BI954572.1|BI954572 HVSMEm0018K24f Hordeum vulgare green... 54 1e-005
gb|BE215115.1|BE215115 HV_CEb0005N17f Hordeum vulgare seedl... 54 1e-005
gb|BF065823.1|BF065823 HV_CEb0014B12f Hordeum vulgare seedl... 54 1e-005
gb|BI959850.1|BI959850 HVSMEn0022A22f Hordeum vulgare rachi... 54 1e-005
gb|BF258593.2|BF258593 HVSMEf0016C14f Hordeum vulgare seedl... 54 1e-005
gb|BG368329.2|BG368329 HVSMEi0017L14f Hordeum vulgare 20 DA... 54 1e-005
gb|BG369970.2|BG369970 HVSMEi0026M01f Hordeum vulgare 20 DA... 54 1e-005
gb|AV926393.1|AV926393 AV926393 K. Sato unpublished cDNA li... 54 1e-005
gb|BQ465324.1|BQ465324 HU03E21r HU Hordeum vulgare subsp. v... 54 1e-005
gb|BQ465846.1|BQ465846 HU04N17r HU Hordeum vulgare subsp. v... 54 1e-005
gb|BQ466063.1|BQ466063 HT01H14T HT Hordeum vulgare subsp. v... 54 1e-005
gb|BQ466539.1|BQ466539 HT02N05r HT Hordeum vulgare subsp. v... 54 1e-005
gb|BQ471385.1|BQ471385 HV02E13r HV Hordeum vulgare subsp. v... 54 1e-005
gb|BQ472279.1|BQ472279 HV04O24r HV Hordeum vulgare subsp. v... 54 1e-005
gb|BI777214.2|BI777214 EBro03_SQ002_H09_R root, 3 week, wat... 54 1e-005
gb|BM369932.2|BM369932 EBro08_SQ002_G03_R root, 3 week, dro... 54 1e-005
gb|BQ761706.1|BQ761706 EBem10_SQ001_I17_R embryo, 2 Day ger... 54 1e-005
gb|BQ765641.1|BQ765641 EBro03_SQ007_B24_R root, 3 week, wat... 54 1e-005
gb|BQ768278.1|BQ768278 EBro08_SQ011_C09_R root, 3 week, dro... 54 1e-005
gb|CA004487.1|CA004487 HS17M05r HS Hordeum vulgare subsp. v... 54 1e-005
gb|CA004590.1|CA004590 HS18B07r HS Hordeum vulgare subsp. v... 54 1e-005
gb|CA004768.1|CA004768 HS18K04r HS Hordeum vulgare subsp. v... 54 1e-005
gb|CA006566.1|CA006566 HU05A23r HU Hordeum vulgare subsp. v... 54 1e-005
gb|CA006879.1|CA006879 HU05P13r HU Hordeum vulgare subsp. v... 54 1e-005
gb|CA006923.1|CA006923 HU06B24r HU Hordeum vulgare subsp. v... 54 1e-005
gb|CA007957.1|CA007957 HU09H22r HU Hordeum vulgare subsp. v... 54 1e-005
gb|CA008771.1|CA008771 HU12A18r HU Hordeum vulgare subsp. v... 54 1e-005
gb|CA011781.1|CA011781 HT03I11r HT Hordeum vulgare subsp. v... 54 1e-005
gb|CA011830.1|CA011830 HT03K18r HT Hordeum vulgare subsp. v... 54 1e-005
gb|CA012204.1|CA012204 HT04M05r HT Hordeum vulgare subsp. v... 54 1e-005
gb|CA012271.1|CA012271 HT04P05r HT Hordeum vulgare subsp. v... 54 1e-005
gb|CA012660.1|CA012660 HT06A24r HT Hordeum vulgare subsp. v... 54 1e-005
gb|CA012790.1|CA012790 HT06H04r HT Hordeum vulgare subsp. v... 54 1e-005
gb|CA013498.1|CA013498 HT08K11r HT Hordeum vulgare subsp. v... 54 1e-005
gb|CA013893.1|CA013893 HT09M17r HT Hordeum vulgare subsp. v... 54 1e-005
gb|CA013921.1|CA013921 HT09N11r HT Hordeum vulgare subsp. v... 54 1e-005
gb|CA014171.1|CA014171 HT10J10r HT Hordeum vulgare subsp. v... 54 1e-005
gb|CA014417.1|CA014417 HT11E16r HT Hordeum vulgare subsp. v... 54 1e-005
gb|CA015159.1|CA015159 HT13H11r HT Hordeum vulgare subsp. v... 54 1e-005
gb|CA015354.1|CA015354 HT14A21r HT Hordeum vulgare subsp. v... 54 1e-005
gb|CA015430.1|CA015430 HT14E17r HT Hordeum vulgare subsp. v... 54 1e-005
gb|CA015506.1|CA015506 HT14I06r HT Hordeum vulgare subsp. v... 54 1e-005
gb|CA015595.1|CA015595 HT14M20r HT Hordeum vulgare subsp. v... 54 1e-005
gb|CA017296.1|CA017296 HV12P04u HV Hordeum vulgare subsp. v... 54 1e-005
gb|CA017736.1|CA017736 HV06B12r HV Hordeum vulgare subsp. v... 54 1e-005
gb|CA019215.1|CA019215 HV11E04r HV Hordeum vulgare subsp. v... 54 1e-005
gb|CA019604.1|CA019604 HV12I09r HV Hordeum vulgare subsp. v... 54 1e-005
gb|CA019733.1|CA019733 HV12P04r HV Hordeum vulgare subsp. v... 54 1e-005
gb|AL504245.1|AL504245 AL504245 Hordeum vulgare Barke roots... 52 5e-005
gb|AL507901.1|AL507901 AL507901 Hordeum vulgare Barke devel... 52 5e-005
gb|AL509033.1|AL509033 AL509033 Hordeum vulgare Barke devel... 52 5e-005
gb|BF253464.2|BF253464 HVSMEf0001H22f Hordeum vulgare seedl... 52 5e-005
gb|BF254185.2|BF254185 HVSMEf0003E03f Hordeum vulgare seedl... 52 5e-005
gb|BI956874.1|BI956874 HVSMEn0005M13f Hordeum vulgare rachi... 52 5e-005
gb|BF629416.3|BF629416 HVSMEb0012D22f Hordeum vulgare seedl... 52 5e-005
gb|BF631373.3|BF631373 HVSMEb0015L24f Hordeum vulgare seedl... 52 5e-005
gb|BG344369.2|BG344369 HVSMEg0009B05f Hordeum vulgare pre-a... 52 5e-005
gb|BQ469578.1|BQ469578 HZ01D14r HZ Hordeum vulgare subsp. v... 52 5e-005
gb|BQ470900.1|BQ470900 HX04G04r HX Hordeum vulgare subsp. v... 52 5e-005
gb|BQ664493.1|BQ664493 HV03J07u HV Hordeum vulgare subsp. v... 52 5e-005
gb|BQ763669.1|BQ763669 EBro03_SQ005_H06 _R root, 3 week, wa... 52 5e-005
gb|BQ765739.1|BQ765739 EBro03_SQ008_D05_R root, 3 week, wat... 52 5e-005
gb|CA020760.1|CA020760 HZ37J21r HZ Hordeum vulgare subsp. v... 52 5e-005
gb|CA021155.1|CA021155 HZ39E09r HZ Hordeum vulgare subsp. v... 52 5e-005
gb|CA022532.1|CA022532 HZ43I08r HZ Hordeum vulgare subsp. v... 52 5e-005
gb|CA022585.1|CA022585 HZ43L10r HZ Hordeum vulgare subsp. v... 52 5e-005
gb|CA028452.1|CA028452 HZ62A05r HZ Hordeum vulgare subsp. v... 52 5e-005
gb|AL503882.1|AL503882 AL503882 Hordeum vulgare Barke roots... 50 2e-004
gb|AL503885.1|AL503885 AL503885 Hordeum vulgare Barke roots... 50 2e-004
gb|AL503918.1|AL503918 AL503918 Hordeum vulgare Barke roots... 50 2e-004
gb|AL505762.1|AL505762 AL505762 Hordeum vulgare Barke roots... 50 2e-004
gb|BF625001.1|BF625001 HVSMEa0005H07f Hordeum vulgare seedl... 50 2e-004
gb|BF618606.2|BF618606 HVSMEc0006K07f Hordeum vulgare seedl... 50 2e-004
gb|BF617039.2|BF617039 HVSMEc0014G04f Hordeum vulgare seedl... 50 2e-004
gb|BF620751.2|BF620751 HVSMEc0020M03f Hordeum vulgare seedl... 50 2e-004
gb|BF620798.2|BF620798 HVSMEc0020O05f Hordeum vulgare seedl... 50 2e-004
gb|BF259360.2|BF259360 HVSMEf0019G04f Hordeum vulgare seedl... 50 2e-004
gb|BE454557.2|BE454557 HVSMEh0094E01f Hordeum vulgare 5-45 ... 50 2e-004
gb|BI951776.1|BI951776 HVSMEm0002L16f Hordeum vulgare green... 50 2e-004
gb|BI952845.1|BI952845 HVSMEm0007P04f Hordeum vulgare green... 50 2e-004
gb|BI954451.1|BI954451 HVSMEm0017P19f Hordeum vulgare green... 50 2e-004
gb|BI954673.1|BI954673 HVSMEm0019C12f Hordeum vulgare green... 50 2e-004
gb|BI956180.1|BI956180 HVSMEm0025O19f Hordeum vulgare green... 50 2e-004
gb|BE216352.1|BE216352 HV_CEb0010E08f Hordeum vulgare seedl... 50 2e-004
gb|BE558780.1|BE558780 HV_CEb0020F19f Hordeum vulgare seedl... 50 2e-004
gb|BE215675.2|BE215675 HV_CEb0007N22f Hordeum vulgare seedl... 50 2e-004
gb|BG416384.1|BG416384 HVSMEk0011O17f Hordeum vulgare testa... 50 2e-004
gb|BI960099.1|BI960099 HVSMEn0023D18f Hordeum vulgare rachi... 50 2e-004
gb|BF626685.3|BF626685 HVSMEb0001B05f Hordeum vulgare seedl... 50 2e-004
gb|BF627973.3|BF627973 HVSMEb0002D13f Hordeum vulgare seedl... 50 2e-004
gb|BG301221.2|BG301221 HVSMEb0019P19f Hordeum vulgare seedl... 50 2e-004
gb|BG366283.2|BG366283 HVSMEi0006J06f Hordeum vulgare 20 DA... 50 2e-004
gb|AV915449.1|AV915449 AV915449 K. Sato unpublished cDNA li... 50 2e-004
gb|BI779196.2|BI779196 EBro01_SQ003_E18_R root, 3 week, hyd... 50 2e-004
gb|BQ763953.1|BQ763953 EBro03_SQ005_J19_R root, 3 week, wat... 50 2e-004
gb|BQ768382.1|BQ768382 EBro08_SQ011_E18_R root, 3 week, dro... 50 2e-004
gb|CA017900.1|CA017900 HV06L11r HV Hordeum vulgare subsp. v... 50 2e-004
gb|CA019537.1|CA019537 HV12E17r HV Hordeum vulgare subsp. v... 50 2e-004
gb|CA019914.1|CA019914 HV13L06r HV Hordeum vulgare subsp. v... 50 2e-004
gb|CA032893.1|CA032893 HX14H24r HX Hordeum vulgare subsp. v... 50 2e-004
gb|BF625544.2|BF625544 HVSMEa0011C20f Hordeum vulgare seedl... 48 8e-004
gb|BF259871.2|BF259871 HVSMEf0020H22f Hordeum vulgare seedl... 48 8e-004
gb|BG366591.1|BG366591 HVSMEi0007J01f Hordeum vulgare 20 DA... 48 8e-004
gb|BI957601.1|BI957601 HVSMEn0010F08f Hordeum vulgare rachi... 48 8e-004
gb|BI959295.1|BI959295 HVSMEn0019C06f Hordeum vulgare rachi... 48 8e-004
gb|BI959710.1|BI959710 HVSMEn0020O14f Hordeum vulgare rachi... 48 8e-004
gb|BG417623.2|BG417623 HVSMEk0018K24f Hordeum vulgare testa... 48 8e-004
gb|BQ768821.1|BQ768821 EBro08_SQ012_C24_R root, 3 week, dro... 48 8e-004
gb|CA019377.1|CA019377 HV11M17r HV Hordeum vulgare subsp. v... 48 8e-004
gb|CB877775.1|CB877775 HP06B24T HP Hordeum vulgare subsp. v... 48 8e-004
gb|AL501077.1|AL501077 AL501077 Hordeum vulgare Barke roots... 46 0.003
gb|AL502590.1|AL502590 AL502590 Hordeum vulgare Barke roots... 46 0.003
gb|AL504878.1|AL504878 AL504878 Hordeum vulgare Barke roots... 46 0.003
gb|BI947764.1|BI947764 HVSMEl0006M23f Hordeum vulgare spike... 46 0.003
gb|BF253710.3|BF253710 HVSMEf0001O15f Hordeum vulgare seedl... 46 0.003
gb|BF255916.3|BF255916 HVSMEf0008D04f Hordeum vulgare seedl... 46 0.003
gb|BG365717.2|BG365717 HVSMEi0003O11f Hordeum vulgare 20 DA... 46 0.003
gb|CA004325.1|CA004325 HS17E03r HS Hordeum vulgare subsp. v... 46 0.003
gb|CA004401.1|CA004401 HS17H17r HS Hordeum vulgare subsp. v... 46 0.003
gb|CA008188.1|CA008188 HU10C21r HU Hordeum vulgare subsp. v... 46 0.003
gb|CA012370.1|CA012370 HT05D22r HT Hordeum vulgare subsp. v... 46 0.003
gb|CA012445.1|CA012445 HT05H07r HT Hordeum vulgare subsp. v... 46 0.003
gb|CA014052.1|CA014052 HT10E02r HT Hordeum vulgare subsp. v... 46 0.003
gb|CA027879.1|CA027879 HZ60F01r HZ Hordeum vulgare subsp. v... 46 0.003
gb|BF622053.1|BF622053 HVSMEa0001K05f Hordeum vulgare seedl... 44 0.013
gb|BF626296.2|BF626296 HVSMEa0018E11f Hordeum vulgare seedl... 44 0.013
gb|BF620038.2|BF620038 HVSMEc0011F07f Hordeum vulgare seedl... 44 0.013
gb|BF254535.2|BF254535 HVSMEf0004E20f Hordeum vulgare seedl... 44 0.013
gb|BF259404.2|BF259404 HVSMEf0019A08f Hordeum vulgare seedl... 44 0.013
gb|BF259792.2|BF259792 HVSMEf0020E11f Hordeum vulgare seedl... 44 0.013
gb|BF265962.2|BF265962 HV_CEa0013M17f Hordeum vulgare seedl... 44 0.013
gb|BI960213.1|BI960213 HVSMEn0023M03f Hordeum vulgare rachi... 44 0.013
gb|BI960469.1|BI960469 HVSMEn0024L08f Hordeum vulgare rachi... 44 0.013
gb|BF628118.3|BF628118 HVSMEb0003C22f Hordeum vulgare seedl... 44 0.013
gb|BF257410.3|BF257410 HVSMEf0012N08f Hordeum vulgare seedl... 44 0.013
gb|BM816712.1|BM816712 HB01H08_T3.ab1 HB Hordeum vulgare su... 44 0.013
gb|BQ468054.1|BQ468054 HR01M21r HR Hordeum vulgare subsp. v... 44 0.013
gb|BM441989.2|BM441989 EBan01_SQ001_H04_R anther, yellow st... 44 0.013
gb|BM099366.2|BM099366 EBes01_SQ003_A19_R embryo sac, 4-6 D... 44 0.013
gb|BM370739.2|BM370739 EBro04_SQ002_A21_R root, 3 week, sal... 44 0.013
gb|BM370497.2|BM370497 EBro08_SQ004_G12_R root, 3 week, dro... 44 0.013
gb|BM370611.2|BM370611 EBro08_SQ004_L20_R root, 3 week, dro... 44 0.013
gb|BQ760790.1|BQ760790 EBro03_SQ003_H17_R root, 3 week, wat... 44 0.013
gb|BQ766880.1|BQ766880 EBro08_SQ007_J12_R root, 3 week, dro... 44 0.013
gb|BQ767215.1|BQ767215 EBro08_SQ008_E08_R root, 3 week, dro... 44 0.013
gb|CA007768.1|CA007768 HU08P09r HU Hordeum vulgare subsp. v... 44 0.013
gb|CA008155.1|CA008155 HU10A24r HU Hordeum vulgare subsp. v... 44 0.013
gb|CA018119.1|CA018119 HV07I21r HV Hordeum vulgare subsp. v... 44 0.013
gb|CK122767.1|CK122767 BES1824105l08 BES1824 Hordeum vulgar... 44 0.013
emb|Z23131.1|HVPRX6GNA H.vulgare prx6 gene, complete CDS 44 0.013
gb|AL450693.1|AL450693 AL450693 Hordeum vulgare Barke etiol... 42 0.051
gb|AL499636.1|AL499636 AL499636 Hordeum vulgare Barke etiol... 42 0.051
gb|AL499671.1|AL499671 AL499671 Hordeum vulgare Barke etiol... 42 0.051
gb|AL500048.1|AL500048 AL500048 Hordeum vulgare Barke etiol... 42 0.051
gb|AL500841.1|AL500841 AL500841 Hordeum vulgare Barke roots... 42 0.051
gb|AL501913.1|AL501913 AL501913 Hordeum vulgare Barke roots... 42 0.051
gb|AL503424.1|AL503424 AL503424 Hordeum vulgare Barke roots... 42 0.051
gb|AL504610.1|AL504610 AL504610 Hordeum vulgare Barke roots... 42 0.051
gb|BI951493.1|BI951493 HVSMEm0001B21f Hordeum vulgare green... 42 0.051
gb|BI951997.1|BI951997 HVSMEm0004C12f Hordeum vulgare green... 42 0.051
gb|BI952378.1|BI952378 HVSMEm0006C11f Hordeum vulgare green... 42 0.051
gb|BI952379.1|BI952379 HVSMEm0006C12f Hordeum vulgare green... 42 0.051
gb|BI952385.1|BI952385 HVSMEm0006C18f Hordeum vulgare green... 42 0.051
gb|BI952405.1|BI952405 HVSMEm0006E22f Hordeum vulgare green... 42 0.051
gb|BI952884.1|BI952884 HVSMEm0008D05f Hordeum vulgare green... 42 0.051
gb|BI953667.1|BI953667 HVSMEm0013M16f Hordeum vulgare green... 42 0.051
gb|BI953761.1|BI953761 HVSMEm0014E11f Hordeum vulgare green... 42 0.051
gb|BI954229.1|BI954229 HVSMEm0016L14f Hordeum vulgare green... 42 0.051
gb|BI954554.1|BI954554 HVSMEm0018J11f Hordeum vulgare green... 42 0.051
gb|BI954569.1|BI954569 HVSMEm0018K18f Hordeum vulgare green... 42 0.051
gb|BI954880.1|BI954880 HVSMEm0020D18f Hordeum vulgare green... 42 0.051
gb|BI955152.1|BI955152 HVSMEm0021K08f Hordeum vulgare green... 42 0.051
gb|BI955203.1|BI955203 HVSMEm0021N22f Hordeum vulgare green... 42 0.051
gb|BI955646.1|BI955646 HVSMEm0023O09f Hordeum vulgare green... 42 0.051
gb|BI955736.1|BI955736 HVSMEm0024E14f Hordeum vulgare green... 42 0.051
gb|BE214065.1|BE214065 HV_CEb0002B16f Hordeum vulgare seedl... 42 0.051
gb|BE215774.1|BE215774 HV_CEb0008H07f Hordeum vulgare seedl... 42 0.051
gb|BE215997.1|BE215997 HV_CEb0009A21f Hordeum vulgare seedl... 42 0.051
gb|BE216803.1|BE216803 HV_CEb0011K04f Hordeum vulgare seedl... 42 0.051
gb|BE519843.1|BE519843 HV_CEb0021G20f Hordeum vulgare seedl... 42 0.051
gb|BE519980.1|BE519980 HV_CEb0021P01f Hordeum vulgare seedl... 42 0.051
gb|BF064577.1|BF064577 HV_CEb0015P03f Hordeum vulgare seedl... 42 0.051
gb|BF262341.2|BF262341 HV_CEa0003L10f Hordeum vulgare seedl... 42 0.051
gb|BF263236.2|BF263236 HV_CEa0006D10f Hordeum vulgare seedl... 42 0.051
gb|BF264190.2|BF264190 HV_CEa0008M06f Hordeum vulgare seedl... 42 0.051
gb|BF264384.2|BF264384 HV_CEa0009E13f Hordeum vulgare seedl... 42 0.051
gb|BF265004.2|BF265004 HV_CEa0010P24f Hordeum vulgare seedl... 42 0.051
gb|BF266102.2|BF266102 HV_CEa0014D01f Hordeum vulgare seedl... 42 0.051
gb|BF266620.2|BF266620 HV_CEa0015J22f Hordeum vulgare seedl... 42 0.051
gb|BF267038.2|BF267038 HV_CEa0016M07f Hordeum vulgare seedl... 42 0.051
gb|BF267576.2|BF267576 HV_CEa0018F04f Hordeum vulgare seedl... 42 0.051
gb|BF267708.2|BF267708 HV_CEa0018K17f Hordeum vulgare seedl... 42 0.051
gb|BF267910.2|BF267910 HV_CEa0019E05f Hordeum vulgare seedl... 42 0.051
gb|BE215250.2|BE215250 HV_CEb0006E13f Hordeum vulgare seedl... 42 0.051
gb|BE215466.2|BE215466 HV_CEb0006O01f Hordeum vulgare seedl... 42 0.051
gb|BE216103.2|BE216103 HV_CEb0009G22f Hordeum vulgare seedl... 42 0.051
gb|BE216546.2|BE216546 HV_CEb0010M13f Hordeum vulgare seedl... 42 0.051
gb|BF065930.2|BF065930 HV_CEb0014G05f Hordeum vulgare seedl... 42 0.051
gb|BF065954.2|BF065954 HV_CEb0014H05f Hordeum vulgare seedl... 42 0.051
gb|BF066011.2|BF066011 HV_CEb0014J14f Hordeum vulgare seedl... 42 0.051
gb|BE558443.2|BE558443 HV_CEb0017L06f Hordeum vulgare seedl... 42 0.051
gb|BE558514.2|BE558514 HV_CEb0018B07f Hordeum vulgare seedl... 42 0.051
gb|BF065109.2|BF065109 HV_CEb0023A20f Hordeum vulgare seedl... 42 0.051
gb|BI959359.1|BI959359 HVSMEn0019F21f Hordeum vulgare rachi... 42 0.051
gb|BF260922.3|BF260922 HVSMEf0023E18f Hordeum vulgare seedl... 42 0.051
gb|BG367796.2|BG367796 HVSMEi0013L07f Hordeum vulgare 20 DA... 42 0.051
gb|BF263468.3|BF263468 HV_CEa0006N05f Hordeum vulgare seedl... 42 0.051
gb|BF267330.3|BF267330 HV_CEa0017J15f Hordeum vulgare seedl... 42 0.051
gb|BF267871.3|BF267871 HV_CEa0019C10f Hordeum vulgare seedl... 42 0.051
gb|AV923316.1|AV923316 AV923316 K. Sato unpublished cDNA li... 42 0.051
gb|AV925367.1|AV925367 AV925367 K. Sato unpublished cDNA li... 42 0.051
gb|AV925450.1|AV925450 AV925450 K. Sato unpublished cDNA li... 42 0.051
gb|AV926038.1|AV926038 AV926038 K. Sato unpublished cDNA li... 42 0.051
gb|BJ448641.1|BJ448641 BJ448641 K. Sato unpublished cDNA li... 42 0.051
gb|BQ461125.1|BQ461125 HE01C14r HE Hordeum vulgare subsp. v... 42 0.051
gb|BQ461183.1|BQ461183 HE01P17r HE Hordeum vulgare subsp. v... 42 0.051
gb|BQ471820.1|BQ471820 HV03J07r HV Hordeum vulgare subsp. v... 42 0.051
gb|BQ135353.1|BQ135353 LP10116 Lemma/palea-enriched cDNA li... 42 0.051
gb|BQ661223.1|BQ661223 HM02H24u HM Hordeum vulgare subsp. v... 42 0.051
gb|BQ661568.1|BQ661568 HM04A12u HM Hordeum vulgare subsp. v... 42 0.051
gb|BQ662082.1|BQ662082 HR01H14u HR Hordeum vulgare subsp. v... 42 0.051
gb|BI779510.2|BI779510 EBro01_SQ004_E09_R root, 3 week, hyd... 42 0.051
gb|BI779578.2|BI779578 EBro01_SQ004_H15_R root, 3 week, hyd... 42 0.051
gb|BI777729.2|BI777729 EBro08_SQ001_K11_R root, 3 week, dro... 42 0.051
gb|BU979090.1|BU979090 HA15C02r HA Hordeum vulgare subsp. v... 42 0.051
gb|BU994924.1|BU994924 HM08K04r HM Hordeum vulgare subsp. v... 42 0.051
gb|BU996825.1|BU996825 HM14O06r HM Hordeum vulgare subsp. v... 42 0.051
gb|CA002255.1|CA002255 HS06P24r HS Hordeum vulgare subsp. v... 42 0.051
gb|CA016957.1|CA016957 HV05K16u HV Hordeum vulgare subsp. v... 42 0.051
gb|CA017597.1|CA017597 HV05K16r HV Hordeum vulgare subsp. v... 42 0.051
gb|CA028704.1|CA028704 HZ63A06r HZ Hordeum vulgare subsp. v... 42 0.051
gb|BJ544176.1|BJ544176 BJ544176 K. Sato unpublished cDNA li... 42 0.051
gb|BJ544565.1|BJ544565 BJ544565 K. Sato unpublished cDNA li... 42 0.051
gb|CB877848.1|CB877848 HP06G09T HP Hordeum vulgare subsp. v... 42 0.051
gb|CK124974.1|CK124974 BES1824111A2e07 BES1824 Hordeum vulg... 42 0.051
emb|AJ234441.1|HVU234441 Hordeum vulgare partial mRNA; clon... 42 0.051
gb|AL502141.1|AL502141 AL502141 Hordeum vulgare Barke roots... 40 0.20
gb|AL503419.1|AL503419 AL503419 Hordeum vulgare Barke roots... 40 0.20
gb|AL504948.1|AL504948 AL504948 Hordeum vulgare Barke roots... 40 0.20
gb|BF628321.2|BF628321 HVSMEb0003L13f Hordeum vulgare seedl... 40 0.20
gb|BF255232.2|BF255232 HVSMEf0006E24f Hordeum vulgare seedl... 40 0.20
gb|BI951600.1|BI951600 HVSMEm0001J11f Hordeum vulgare green... 40 0.20
gb|BI952130.1|BI952130 HVSMEm0004L13f Hordeum vulgare green... 40 0.20
gb|BI952323.1|BI952323 HVSMEm0005P05f Hordeum vulgare green... 40 0.20
gb|BI952553.1|BI952553 HVSMEm0006O22f Hordeum vulgare green... 40 0.20
gb|BI953391.1|BI953391 HVSMEm0012H21f Hordeum vulgare green... 40 0.20
gb|BI955078.1|BI955078 HVSMEm0021D11f Hordeum vulgare green... 40 0.20
gb|BI955180.1|BI955180 HVSMEm0021M03f Hordeum vulgare green... 40 0.20
gb|BF262639.1|BF262639 HV_CEa0004I16f Hordeum vulgare seedl... 40 0.20
gb|BF263829.2|BF263829 HV_CEa0007M15f Hordeum vulgare seedl... 40 0.20
gb|BF263830.2|BF263830 HV_CEa0007M16f Hordeum vulgare seedl... 40 0.20
gb|BF264390.2|BF264390 HV_CEa0009E19f Hordeum vulgare seedl... 40 0.20
gb|BF265719.2|BF265719 HV_CEa0013C12f Hordeum vulgare seedl... 40 0.20
gb|BF065721.2|BF065721 HV_CEb0013J24f Hordeum vulgare seedl... 40 0.20
gb|BG365154.2|BG365154 HVSMEi0001I12f Hordeum vulgare 20 DA... 40 0.20
gb|BG417495.2|BG417495 HVSMEk0017N02f Hordeum vulgare testa... 40 0.20
gb|BE559124.3|BE559124 HV_CEb0022P20f Hordeum vulgare seedl... 40 0.20
gb|AV926145.1|AV926145 AV926145 K. Sato unpublished cDNA li... 40 0.20
gb|AV926163.1|AV926163 AV926163 K. Sato unpublished cDNA li... 40 0.20
gb|AV926712.1|AV926712 AV926712 K. Sato unpublished cDNA li... 40 0.20
gb|BM100377.2|BM100377 EBma01_SQ005_A15_R maternal, 4 DPA, ... 40 0.20
gb|BI778948.2|BI778948 EBro01_SQ002_D16_R root, 3 week, hyd... 40 0.20
gb|BI779393.2|BI779393 EBro01_SQ003_O01_R root, 3 week, hyd... 40 0.20
gb|BM442791.2|BM442791 EBro02_SQ001_E03_R root, 3 week, hyd... 40 0.20
gb|BM370575.2|BM370575 EBro08_SQ004_K06_R root, 3 week, dro... 40 0.20
gb|BQ762842.1|BQ762842 EBro02_SQ006_D08_R root, 3 week, hyd... 40 0.20
gb|BQ768097.1|BQ768097 EBro08_SQ010_N15_R root, 3 week, dro... 40 0.20
gb|BU975155.1|BU975155 HB30D24r BC Hordeum vulgare subsp. v... 40 0.20
gb|BU982316.1|BU982316 HA26C14r HA Hordeum vulgare subsp. v... 40 0.20
gb|CA026284.1|CA026284 HZ55H10r HZ Hordeum vulgare subsp. v... 40 0.20
gb|CA029532.1|CA029532 HZ65H20r HZ Hordeum vulgare subsp. v... 40 0.20
gb|CV055643.1|CV055643 BNEL121h4 Barley EST endosperm libra... 40 0.20
emb|AJ276227.1|HVU276227 Hordeum vulgare partial mRNA for p... 40 0.20
>gb|BE455929.2|BE455929 HVSMEg0017J22f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0017J22f, mRNA sequence
Length = 802
Score = 228 bits (115), Expect = 4e-058
Identities = 218/253 (86%)
Strand = Plus / Plus
Query: 498 gcggtccgttctggagcgtgccgacggggaggcgcgacggcaccgtgtccatcaagcagg 557
|||| ||||||||| | |||||||||| | |||||||||||| ||||| ||||||||||
Sbjct: 175 gcgggccgttctggcgggtgccgacggngcggcgcgacggcagggtgtcgatcaagcagg 234
Query: 558 aggcgctggaccagatccccgcgcccaccatgaacttcacccaactcctccagtccttcc 617
||||||||||||||||||| ||||||||||||||||||||| | || ||| |||||||
Sbjct: 235 aggcgctggaccagatcccggcgcccaccatgaacttcaccgacctgctcgcctccttcc 294
Query: 618 agaacaagagcctcaacctcgccgacctcgtctggctctcaggggctcacacgatcggca 677
|||| | ||| || |||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 295 gcgccaagggactcgacgtcgccgacctcgtctggctctcaggggcgcacaccatcggca 354
Query: 678 tctcccaatgcaactccttcagcgagcgcctgtacaacttcacggggcacggcgggcccg 737
|||| || |||||||||||||||||||| || ||||||||||| || | |||||| ||||
Sbjct: 355 tctcgcactgcaactccttcagcgagcggctatacaacttcaccggccgcggcggccccg 414
Query: 738 acgacgcggaccc 750
|||||||||||
Sbjct: 415 gngacgcggaccc 427
Score = 129 bits (65), Expect = 3e-028
Identities = 121/141 (85%)
Strand = Plus / Plus
Query: 787 caagtgcaagacgctgacggacaacacgacgatcgtggagatggaccccggcagcttccg 846
|||||||| |||| ||||||||||| || || |||||||||||||| | |||||||
Sbjct: 467 caagtgcatcacgcncacggacaacaccaccattgtggagatggaccctgngagcttcct 526
Query: 847 caccttcgacctgagctactaccgcggcgtgctcaagcggcggggcctgttccagtccga 906
|||||| ||||| |||||||||||||| |||||||| ||||| || |||||||||||
Sbjct: 527 cacctttgaccttagctactaccgcggnnctctcaagcgccggggactcttccagtccga 586
Query: 907 cgccgcgctcatcaccgacgc 927
|||||||||||||||||||||
Sbjct: 587 cgccgcgctcatcaccgacgc 607
Score = 48.1 bits (24), Expect = 8e-004
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 308 tgcgacgcgtcagtgctgctcaacgcgacgggcggc 343
||||||||||| |||||||| |||||||||| ||||
Sbjct: 106 tgcgacgcgtcggtgctgctgaacgcgacggccggc 141
>gb|BM372726.2|BM372726 EBpi05_SQ003_M06_R pistil, 8 DPA, no treatment, cv Optic, EBpi05
Hordeum vulgare subsp. vulgare cDNA clone
EBpi05_SQ003_M06 5', mRNA sequence
Length = 563
Score = 153 bits (77), Expect = 2e-035
Identities = 191/229 (83%)
Strand = Plus / Plus
Query: 787 caagtgcaagacgctgacggacaacacgacgatcgtggagatggaccccggcagcttccg 846
|||||||| |||| |||||||||||| || || |||||||||||||| || |||||||
Sbjct: 68 caagtgcaccacgccgacggacaacaccaccattgtggagatggaccctgggagcttcct 127
Query: 847 caccttcgacctgagctactaccgcggcgtgctcaagcggcggggcctgttccagtccga 906
|||||| ||||| ||||||||||||||| | ||||||| ||||| || |||||||||||
Sbjct: 128 cacctttgaccttagctactaccgcggcctcctcaagcaccggggactcttccagtccga 187
Query: 907 cgccgcgctcatcaccgacgccgcctccaaggccgacatcctcagcgtgatcaacgcgcc 966
||||||||||||||||||||| || | | ||||||| || |||||| ||| | ||
Sbjct: 188 cgccgcgctcatcaccgacgcggcggcgagggccgacgtcgagagcgtggccaagggtcc 247
Query: 967 gcccgaggtgttcttccaggtcttcgcgggctccatggtcaagatgggc 1015
||| ||||||||||||||||| ||||| | |||||||| | |||||||
Sbjct: 248 gccggaggtgttcttccaggtgttcgcacggtccatggtgaggatgggc 296
>gb|BU998458.1|BU998458 HI11C02r HI Hordeum vulgare subsp. vulgare cDNA clone HI11C02
5-PRIME, mRNA sequence
Length = 618
Score = 99.6 bits (50), Expect = 3e-019
Identities = 74/82 (90%)
Strand = Plus / Plus
Query: 406 catcaaggcgctgctcgagaaggagtgccccggcgtggtgtcctgcgccgacatcgtcgc 465
||||||||||| ||||||||| | |||||| ||||| || |||||||| |||||||||||
Sbjct: 458 catcaaggcgcagctcgagaaagcgtgcccgggcgtcgtctcctgcgctgacatcgtcgc 517
Query: 466 gctcgccgcccgcgactccgtc 487
|||||||||||||||| |||||
Sbjct: 518 gctcgccgcccgcgacgccgtc 539
Score = 67.9 bits (34), Expect = 9e-010
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 281 cacttccacgactgcttcgtcaggggctgcgacgcgtc 318
|||||||||||||||||||||| |||||||||||||||
Sbjct: 342 cacttccacgactgcttcgtcaagggctgcgacgcgtc 379
>gb|BU998705.1|BU998705 HI11O16r HI Hordeum vulgare subsp. vulgare cDNA clone HI11O16
5-PRIME, mRNA sequence
Length = 657
Score = 99.6 bits (50), Expect = 3e-019
Identities = 74/82 (90%)
Strand = Plus / Plus
Query: 406 catcaaggcgctgctcgagaaggagtgccccggcgtggtgtcctgcgccgacatcgtcgc 465
||||||||||| ||||||||| | |||||| ||||| || |||||||| |||||||||||
Sbjct: 27 catcaaggcgcagctcgagaaagcgtgcccgggcgtcgtctcctgcgctgacatcgtcgc 86
Query: 466 gctcgccgcccgcgactccgtc 487
|||||||||||||||| |||||
Sbjct: 87 gctcgccgcccgcgacgccgtc 108
>gb|CA029763.1|CA029763 HX05C10r HX Hordeum vulgare subsp. vulgare cDNA clone HX05C10
5-PRIME, mRNA sequence
Length = 585
Score = 99.6 bits (50), Expect = 3e-019
Identities = 74/82 (90%)
Strand = Plus / Plus
Query: 406 catcaaggcgctgctcgagaaggagtgccccggcgtggtgtcctgcgccgacatcgtcgc 465
||||||||||| ||||||||| | |||||| ||||| || |||||||| |||||||||||
Sbjct: 465 catcaaggcgcagctcgagaaagcgtgcccgggcgtcgtctcctgcgctgacatcgtcgc 524
Query: 466 gctcgccgcccgcgactccgtc 487
|||||||||||||||| |||||
Sbjct: 525 gctcgccgcccgcgacgccgtc 546
Score = 67.9 bits (34), Expect = 9e-010
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 281 cacttccacgactgcttcgtcaggggctgcgacgcgtc 318
|||||||||||||||||||||| |||||||||||||||
Sbjct: 349 cacttccacgactgcttcgtcaagggctgcgacgcgtc 386
>gb|CK125378.1|CK125378 BES1824107n11 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010N117 5-PRIME, mRNA sequence
Length = 738
Score = 99.6 bits (50), Expect = 3e-019
Identities = 74/82 (90%)
Strand = Plus / Plus
Query: 406 catcaaggcgctgctcgagaaggagtgccccggcgtggtgtcctgcgccgacatcgtcgc 465
||||||||||| ||||||||| | |||||| ||||| || |||||||| |||||||||||
Sbjct: 260 catcaaggcgcagctcgagaaagcgtgcccgggcgtcgtctcctgcgctgacatcgtcgc 319
Query: 466 gctcgccgcccgcgactccgtc 487
|||||||||||||||| |||||
Sbjct: 320 gctcgccgcccgcgacgccgtc 341
Score = 67.9 bits (34), Expect = 9e-010
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 281 cacttccacgactgcttcgtcaggggctgcgacgcgtc 318
|||||||||||||||||||||| |||||||||||||||
Sbjct: 144 cacttccacgactgcttcgtcaagggctgcgacgcgtc 181
>gb|CK124503.1|CK124503 BES1824109g06 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010G069 5-PRIME, mRNA sequence
Length = 775
Score = 89.7 bits (45), Expect = 2e-016
Identities = 150/185 (81%)
Strand = Plus / Plus
Query: 287 cacgactgcttcgtcaggggctgcgacgcgtcagtgctgctcaacgcgacgggcggcagc 346
|||||||| ||||||||||| ||||||||||| ||||| || || |||||| |||| |
Sbjct: 1 cacgactgtttcgtcagggggtgcgacgcgtcgctgctgatcgactcgacggcgggcaac 60
Query: 347 gaggcggagaaggacgcggcgcccaacctgacgctgcgcggcttcggcttcatcgaccgc 406
|||||||||||||| ||||| ||| | ||||| ||||||||| | |||||||| |
Sbjct: 61 accgcggagaaggacgctgcgccgaacgggtcgctgggcggcttcgacgtcatcgacacc 120
Query: 407 atcaaggcgctgctcgagaaggagtgccccggcgtggtgtcctgcgccgacatcgtcgcg 466
|||||| |||| ||| | ||||||||||| || |||||||||||||||||||||
Sbjct: 121 gccaaggccgtgctggaggccgtctgccccggcgtcgtctcctgcgccgacatcgtcgcg 180
Query: 467 ctcgc 471
|||||
Sbjct: 181 ctcgc 185
>gb|AL507993.1|AL507993 AL507993 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY07H07V 5',
mRNA sequence
Length = 607
Score = 83.8 bits (42), Expect = 2e-014
Identities = 81/94 (86%)
Strand = Plus / Plus
Query: 280 ccacttccacgactgcttcgtcaggggctgcgacgcgtcagtgctgctcaacgcgacggg 339
||||||||||||||||||||||||||| ||||||| ||| |||||| | || ||||||
Sbjct: 384 ccacttccacgactgcttcgtcaggggttgcgacgggtcggtgctggtggactcgacggc 443
Query: 340 cggcagcgaggcggagaaggacgcggcgcccaac 373
|| | | ||||||||||||||||| ||||||||
Sbjct: 444 ggggaaccaggcggagaaggacgcgccgcccaac 477
>gb|BI779458.2|BI779458 EBro01_SQ004_B16_R root, 3 week, hydroponic grown, no treatment, cv
Optic, EBro01 Hordeum vulgare subsp. vulgare cDNA clone
EBro01_SQ004_B16 5', mRNA sequence
Length = 611
Score = 83.8 bits (42), Expect = 2e-014
Identities = 81/94 (86%)
Strand = Plus / Plus
Query: 280 ccacttccacgactgcttcgtcaggggctgcgacgcgtcagtgctgctcaacgcgacggg 339
||||||||||||||||||||||||||| ||||||| ||| |||||| | || ||||||
Sbjct: 97 ccacttccacgactgcttcgtcaggggttgcgacgggtcggtgctggtggactcgacggc 156
Query: 340 cggcagcgaggcggagaaggacgcggcgcccaac 373
|| | | ||||||||||||||||| ||||||||
Sbjct: 157 ggggaaccaggcggagaaggacgcgccgcccaac 190
>gb|BU994276.1|BU994276 HM06H06r HM Hordeum vulgare subsp. vulgare cDNA clone HM06H06
5-PRIME, mRNA sequence
Length = 562
Score = 83.8 bits (42), Expect = 2e-014
Identities = 81/94 (86%)
Strand = Plus / Plus
Query: 280 ccacttccacgactgcttcgtcaggggctgcgacgcgtcagtgctgctcaacgcgacggg 339
||||||||||||||||||||||||||| ||||||| ||| |||||| | || ||||||
Sbjct: 439 ccacttccacgactgcttcgtcaggggttgcgacgggtcggtgctggtggactcgacggc 498
Query: 340 cggcagcgaggcggagaaggacgcggcgcccaac 373
|| | | ||||||||||||||||| ||||||||
Sbjct: 499 ggggaaccaggcggagaaggacgcgccgcccaac 532
>gb|CB882315.1|CB882315 HL01I08w HL Hordeum vulgare subsp. vulgare cDNA clone HL01I08
3-PRIME, mRNA sequence
Length = 475
Score = 83.8 bits (42), Expect = 2e-014
Identities = 81/94 (86%)
Strand = Plus / Plus
Query: 280 ccacttccacgactgcttcgtcaggggctgcgacgcgtcagtgctgctcaacgcgacggg 339
||||||||||||||||||||||||||| ||||||| ||| |||||| | || ||||||
Sbjct: 382 ccacttccacgactgcttcgtcaggggttgcgacgggtcggtgctggtggactcgacggc 441
Query: 340 cggcagcgaggcggagaaggacgcggcgcccaac 373
|| | | ||||||||||||||||| ||||||||
Sbjct: 442 ggggaaccaggcggagaaggacgcgccgcccaac 475
>gb|BQ461135.1|BQ461135 HE01C07r HE Hordeum vulgare subsp. vulgare cDNA clone HE01C07
5-PRIME, mRNA sequence
Length = 426
Score = 81.8 bits (41), Expect = 6e-014
Identities = 44/45 (97%)
Strand = Plus / Plus
Query: 283 cttccacgactgcttcgtcaggggctgcgacgcgtcagtgctgct 327
|||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 22 cttccacgactgcttcgtcaggggctgcgacgcgtcggtgctgct 66
Score = 48.1 bits (24), Expect = 8e-004
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 446 tcctgcgccgacatcgtcgcgctcgccgcccgcgac 481
|||||||||||||||||||| |||| |||||||||
Sbjct: 200 tcctgcgccgacatcgtcgccttcgcggcccgcgac 235
>gb|BF627946.2|BF627946 HVSMEb0006O05f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0006O05f, mRNA sequence
Length = 755
Score = 73.8 bits (37), Expect = 1e-011
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 283 cttccacgactgcttcgtcaggggctgcgacgcgtcagtgctgct 327
||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 141 cttccacgactgcttcgtcaggggctgtgacgcgtcggtgctgct 185
>gb|BG300276.1|BG300276 HVSMEb0011O12f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0011O12f, mRNA sequence
Length = 516
Score = 73.8 bits (37), Expect = 1e-011
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 409 caaggcgctgctcgagaaggagtgccccggcgtggtgtcctgcgccgacatcgtcgcgct 468
||||||| ||||||| || |||||||||| || || |||||||||||||||||||| ||
Sbjct: 372 caaggcggagctcgaggagcagtgccccggggtcgtctcctgcgccgacatcgtcgctct 431
Query: 469 cgccgcccgcgac 481
|||||| ||||||
Sbjct: 432 cgccgcacgcgac 444
Score = 60.0 bits (30), Expect = 2e-007
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 284 ttccacgactgcttcgtcaggggctgcgacgcgtcagtgctg 325
|||||||||||||||||||| || ||||||||||| ||||||
Sbjct: 256 ttccacgactgcttcgtcagaggatgcgacgcgtcggtgctg 297
>gb|BF616802.2|BF616802 HVSMEc0012M16f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0012M16f, mRNA sequence
Length = 759
Score = 73.8 bits (37), Expect = 1e-011
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 283 cttccacgactgcttcgtcaggggctgcgacgcgtcagtgctgct 327
||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 324 cttccacgactgcttcgtcaggggctgtgacgcgtcggtgctgct 368
>gb|BF620372.2|BF620372 HVSMEc0019K08f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0019K08f, mRNA sequence
Length = 676
Score = 73.8 bits (37), Expect = 1e-011
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 283 cttccacgactgcttcgtcaggggctgcgacgcgtcagtgctgct 327
||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 322 cttccacgactgcttcgtcaggggctgtgacgcgtcggtgctgct 366
>gb|BF261063.2|BF261063 HVSMEf0023K15f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0023K15f, mRNA sequence
Length = 752
Score = 73.8 bits (37), Expect = 1e-011
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 283 cttccacgactgcttcgtcaggggctgcgacgcgtcagtgctgct 327
||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 78 cttccacgactgcttcgtcaggggctgtgacgcgtcggtgctgct 122
>gb|BM374908.1|BM374908 EBma05_SQ003_I04_R maternal, 12 DPA, no treatment, cv Optic, EBma05
Hordeum vulgare subsp. vulgare cDNA clone
EBma05_SQ003_I04 5', mRNA sequence
Length = 384
Score = 73.8 bits (37), Expect = 1e-011
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 283 cttccacgactgcttcgtcaggggctgcgacgcgtcagtgctgct 327
||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 316 cttccacgactgcttcgtcaggggctgtgacgcgtcggtgctgct 360
>gb|BQ468840.1|BQ468840 HM02H24r HM Hordeum vulgare subsp. vulgare cDNA clone HM02H24
5-PRIME, mRNA sequence
Length = 599
Score = 73.8 bits (37), Expect = 1e-011
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 283 cttccacgactgcttcgtcaggggctgcgacgcgtcagtgctgct 327
||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 380 cttccacgactgcttcgtcaggggctgtgacgcgtcggtgctgct 424
>gb|BI778693.2|BI778693 EBro01_SQ001_B17_R root, 3 week, hydroponic grown, no treatment, cv
Optic, EBro01 Hordeum vulgare subsp. vulgare cDNA clone
EBro01_SQ001_B17 5', mRNA sequence
Length = 449
Score = 73.8 bits (37), Expect = 1e-011
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 999 ccatggtcaagatgggcgccatcgaggtcaagaccggctccgagggcgagatcaggaagc 1058
||||||| ||||||| || |||||||||||||||||||| | ||||| |||||||||||
Sbjct: 75 ccatggtgaagatggccggcatcgaggtcaagaccggctaccagggccagatcaggaaga 134
Query: 1059 actgc 1063
|||||
Sbjct: 135 actgc 139
>gb|BM442793.2|BM442793 EBro02_SQ001_E08_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ001_E08 5', mRNA sequence
Length = 532
Score = 73.8 bits (37), Expect = 1e-011
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 999 ccatggtcaagatgggcgccatcgaggtcaagaccggctccgagggcgagatcaggaagc 1058
||||||| ||||||| || |||||||||||||||||||| | ||||| |||||||||||
Sbjct: 342 ccatggtgaagatggccggcatcgaggtcaagaccggctaccagggccagatcaggaaga 401
Query: 1059 actgc 1063
|||||
Sbjct: 402 actgc 406
>gb|BQ766290.1|BQ766290 EBro08_SQ005_F15_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ005_F15 5', mRNA sequence
Length = 476
Score = 73.8 bits (37), Expect = 1e-011
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 999 ccatggtcaagatgggcgccatcgaggtcaagaccggctccgagggcgagatcaggaagc 1058
||||||| ||||||| || |||||||||||||||||||| | ||||| |||||||||||
Sbjct: 107 ccatggtgaagatggccggcatcgaggtcaagaccggctaccagggccagatcaggaaga 166
Query: 1059 actgc 1063
|||||
Sbjct: 167 actgc 171
>gb|BQ766361.1|BQ766361 EBro08_SQ005_C23_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ005_C23 5', mRNA sequence
Length = 345
Score = 73.8 bits (37), Expect = 1e-011
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 283 cttccacgactgcttcgtcaggggctgcgacgcgtcagtgctgct 327
||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 281 cttccacgactgcttcgtcaggggctgtgacgcgtccgtgctgct 325
>gb|BQ767861.1|BQ767861 EBro08_SQ010_E03_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ010_E03 5', mRNA sequence
Length = 526
Score = 73.8 bits (37), Expect = 1e-011
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 999 ccatggtcaagatgggcgccatcgaggtcaagaccggctccgagggcgagatcaggaagc 1058
||||||| ||||||| || |||||||||||||||||||| | ||||| |||||||||||
Sbjct: 143 ccatggtgaagatggccggcatcgaggtcaagaccggctaccagggccagatcaggaaga 202
Query: 1059 actgc 1063
|||||
Sbjct: 203 actgc 207
>gb|CA020728.1|CA020728 HZ37G15r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ37G15
5-PRIME, mRNA sequence
Length = 468
Score = 73.8 bits (37), Expect = 1e-011
Identities = 106/129 (82%)
Strand = Plus / Plus
Query: 409 caaggcgctgctcgagaaggagtgccccggcgtggtgtcctgcgccgacatcgtcgcgct 468
|||||||| ||||||| || |||||||||||| || || ||||||||| |||||| ||
Sbjct: 233 caaggcgcagctcgagtcggtgtgccccggcgtcgtctcgtgcgccgacgtcgtcgtcct 292
Query: 469 cgccgcccgcgactccgtcggcgtcatcggcggtccgttctggagcgtgccgacggggag 528
||||||||||||| |||||| ||| |||||| |||| | ||||||||||||| |
Sbjct: 293 cgccgcccgcgacgccgtcgcattcaccggcgggccgtcgttcgacgtgccgacggggcg 352
Query: 529 gcgcgacgg 537
|||||||||
Sbjct: 353 gcgcgacgg 361
Score = 69.9 bits (35), Expect = 2e-010
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 284 ttccacgactgcttcgtcaggggctgcgacgcgtcagtgctgctcaa 330
||||||||||||||||||||||| ||||||||||| |||||| ||||
Sbjct: 111 ttccacgactgcttcgtcagggggtgcgacgcgtcggtgctgatcaa 157
>gb|BF625705.2|BF625705 HVSMEa0013F06f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0013F06f, mRNA sequence
Length = 523
Score = 71.9 bits (36), Expect = 6e-011
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 284 ttccacgactgcttcgtcaggggctgcgacgcgtcagtgctgct 327
||||||||||||||||||| ||||||||||||||| ||||||||
Sbjct: 298 ttccacgactgcttcgtcaagggctgcgacgcgtccgtgctgct 341
>gb|BF253465.2|BF253465 HVSMEf0001H23f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0001H23f, mRNA sequence
Length = 908
Score = 71.9 bits (36), Expect = 6e-011
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 284 ttccacgactgcttcgtcaggggctgcgacgcgtcagtgctgct 327
||||||||||||||||||| ||||||||||||||| ||||||||
Sbjct: 293 ttccacgactgcttcgtcaagggctgcgacgcgtccgtgctgct 336
>gb|BQ460256.1|BQ460256 HA06M17r HA Hordeum vulgare subsp. vulgare cDNA clone HA06M17
5-PRIME, mRNA sequence
Length = 574
Score = 71.9 bits (36), Expect = 6e-011
Identities = 69/80 (86%)
Strand = Plus / Plus
Query: 409 caaggcgctgctcgagaaggagtgccccggcgtggtgtcctgcgccgacatcgtcgcgct 468
|||||||| ||||||| || |||||||||||| || || ||||||||| |||||| ||
Sbjct: 372 caaggcgcagctcgagtcggtgtgccccggcgtcgtctcgtgcgccgacgtcgtcgtcct 431
Query: 469 cgccgcccgcgactccgtcg 488
||||||||||||| ||||||
Sbjct: 432 cgccgcccgcgacgccgtcg 451
Score = 69.9 bits (35), Expect = 2e-010
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 284 ttccacgactgcttcgtcaggggctgcgacgcgtcagtgctgctcaa 330
||||||||||||||||||||||| ||||||||||| |||||| ||||
Sbjct: 250 ttccacgactgcttcgtcagggggtgcgacgcgtcggtgctgatcaa 296
>gb|BM097476.2|BM097476 EBro05_SQ003_K09_R root, 3 week, reduced light, cv Optic, EBro05
Hordeum vulgare subsp. vulgare cDNA clone
EBro05_SQ003_K09 5', mRNA sequence
Length = 415
Score = 71.9 bits (36), Expect = 6e-011
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 284 ttccacgactgcttcgtcaggggctgcgacgcgtcagtgctgct 327
||||||||||||||||||| ||||||||||||||| ||||||||
Sbjct: 309 ttccacgactgcttcgtcaagggctgcgacgcgtccgtgctgct 352
>gb|BQ763624.1|BQ763624 EBro02_SQ008_P23_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ008_P23 5', mRNA sequence
Length = 637
Score = 71.9 bits (36), Expect = 6e-011
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 284 ttccacgactgcttcgtcaggggctgcgacgcgtcagtgctgct 327
||||||||||||||||||| ||||||||||||||| ||||||||
Sbjct: 294 ttccacgactgcttcgtcaagggctgcgacgcgtccgtgctgct 337
>gb|BU994792.1|BU994792 HM08D11r HM Hordeum vulgare subsp. vulgare cDNA clone HM08D11
5-PRIME, mRNA sequence
Length = 596
Score = 71.9 bits (36), Expect = 6e-011
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 284 ttccacgactgcttcgtcaggggctgcgacgcgtcagtgctgct 327
||||||||||||||||||| ||||||||||||||| ||||||||
Sbjct: 266 ttccacgactgcttcgtcaagggctgcgacgcgtccgtgctgct 309
>gb|AL504856.1|AL504856 AL504856 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW06J19V 5', mRNA sequence
Length = 357
Score = 69.9 bits (35), Expect = 2e-010
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 281 cacttccacgactgcttcgtcaggggctgcgacgcgtcagtgctgct 327
|||||||||||||||||||||||||| ||||||| ||| ||||||||
Sbjct: 187 cacttccacgactgcttcgtcagggggtgcgacgggtcggtgctgct 233
Score = 40.1 bits (20), Expect = 0.20
Identities = 38/44 (86%)
Strand = Plus / Plus
Query: 353 gagaaggacgcggcgcccaacctgacgctgcgcggcttcggctt 396
|||||||||||| ||| |||| |||||| || |||||||||||
Sbjct: 256 gagaaggacgcgctgccaaaccagacgctccgtggcttcggctt 299
>gb|BF259479.2|BF259479 HVSMEf0019D14f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0019D14f, mRNA sequence
Length = 574
Score = 69.9 bits (35), Expect = 2e-010
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 281 cacttccacgactgcttcgtcaggggctgcgacgcgtcagtgctgct 327
|||||||||||||||||||||||||| ||||||| ||| ||||||||
Sbjct: 222 cacttccacgactgcttcgtcagggggtgcgacgggtcggtgctgct 268
Score = 54.0 bits (27), Expect = 1e-005
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 349 ggcggagaaggacgcggcgcccaacctgacgctgcgcggcttcggcttcatcgac 403
|||||||||||||||| ||| |||| |||||| || |||||||||||| |||||
Sbjct: 287 ggcggagaaggacgcgctgccaaaccagacgctccgtggcttcggcttcgtcgac 341
>gb|BM442969.2|BM442969 EBro02_SQ002_B10_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ002_B10 5', mRNA sequence
Length = 308
Score = 69.9 bits (35), Expect = 2e-010
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 281 cacttccacgactgcttcgtcaggggctgcgacgcgtcagtgctgct 327
|||||||||||||||||||||||||| ||||||| ||| ||||||||
Sbjct: 218 cacttccacgactgcttcgtcagggggtgcgacgggtcggtgctgct 264
>gb|BM443023.2|BM443023 EBro02_SQ002_D14_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ002_D14 5', mRNA sequence
Length = 366
Score = 69.9 bits (35), Expect = 2e-010
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 281 cacttccacgactgcttcgtcaggggctgcgacgcgtcagtgctgct 327
|||||||||||||||||||||||||| ||||||| ||| ||||||||
Sbjct: 240 cacttccacgactgcttcgtcagggggtgcgacgggtcggtgctgct 286
Score = 46.1 bits (23), Expect = 0.003
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 353 gagaaggacgcggcgcccaacctgacgctgcgcggcttcggcttcatcgac 403
|||||||||||| ||| |||| |||||| || |||||||||||| |||||
Sbjct: 309 gagaaggacgcgctgccaaaccagacgctccgtggcttcggcttcgtcgac 359
>gb|CA026596.1|CA026596 HZ56F22r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ56F22
5-PRIME, mRNA sequence
Length = 296
Score = 69.9 bits (35), Expect = 2e-010
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 284 ttccacgactgcttcgtcaggggctgcgacgcgtcagtgctgctcaa 330
||||||||||||||||||||||| ||||||||||| |||||| ||||
Sbjct: 248 ttccacgactgcttcgtcagggggtgcgacgcgtcggtgctgatcaa 294
>gb|BF621307.2|BF621307 HVSMEa0006G23f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0006G23f, mRNA sequence
Length = 811
Score = 67.9 bits (34), Expect = 9e-010
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 283 cttccacgactgcttcgtcaggggctgcgacgcgtcagtgct 324
|||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 416 cttccacgactgcttcgtcagggggtgcgacgcgtcggtgct 457
Score = 48.1 bits (24), Expect = 8e-004
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 446 tcctgcgccgacatcgtcgcgctcgccgcccgcgac 481
||||||||||||||| |||| |||||| ||||||||
Sbjct: 581 tcctgcgccgacatcctcgccctcgccacccgcgac 616
>gb|BE603249.2|BE603249 HVSMEh0102L21f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0102L21f, mRNA sequence
Length = 729
Score = 67.9 bits (34), Expect = 9e-010
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 283 cttccacgactgcttcgtcaggggctgcgacgcgtcagtgct 324
|||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 410 cttccacgactgcttcgtcagggggtgcgacgcgtcggtgct 451
>gb|BQ462734.1|BQ462734 HI01N15T HI Hordeum vulgare subsp. vulgare cDNA clone HI01N15
5-PRIME, mRNA sequence
Length = 513
Score = 67.9 bits (34), Expect = 9e-010
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 283 cttccacgactgcttcgtcaggggctgcgacgcgtcagtgct 324
|||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 408 cttccacgactgcttcgtcagggggtgcgacgcgtcggtgct 449
>gb|CA017409.1|CA017409 HV05B23r HV Hordeum vulgare subsp. vulgare cDNA clone HV05B23
5-PRIME, mRNA sequence
Length = 500
Score = 67.9 bits (34), Expect = 9e-010
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 280 ccacttccacgactgcttcgtcaggggctgcgacgcgtcagtgctg 325
||||||||||||||||||||||||||| ||||||| ||| ||||||
Sbjct: 428 ccacttccacgactgcttcgtcaggggttgcgacgggtcggtgctg 473
>gb|CB878393.1|CB878393 HP08G07T HP Hordeum vulgare subsp. vulgare cDNA clone HP08G07
5-PRIME, mRNA sequence
Length = 562
Score = 67.9 bits (34), Expect = 9e-010
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 283 cttccacgactgcttcgtcaggggctgcgacgcgtcagtgct 324
|||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 281 cttccacgactgcttcgtcagggggtgcgacgcgtctgtgct 322
>gb|BF626945.1|BF626945 HVSMEb0001M09f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0001M09f, mRNA sequence
Length = 906
Score = 65.9 bits (33), Expect = 4e-009
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 283 cttccacgactgcttcgtcaggggctgcgacgcgtcagtgctgct 327
|||||||||||||| |||||||||||| |||||||| ||||||||
Sbjct: 176 cttccacgactgctgcgtcaggggctgtgacgcgtctgtgctgct 220
>gb|BF261118.2|BF261118 HVSMEf0023M22f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0023M22f, mRNA sequence
Length = 730
Score = 65.9 bits (33), Expect = 4e-009
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 287 cacgactgcttcgtcaggggctgcgacgcgtcagtgctgct 327
||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 326 cacgactgcttcgtcaggggctgtgacgcgtcggtgctgct 366
>gb|BG367841.1|BG367841 HVSMEi0013O18f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0013O18f, mRNA sequence
Length = 547
Score = 65.9 bits (33), Expect = 4e-009
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 280 ccacttccacgactgcttcgtcaggggctgcgacgcgtcagtgct 324
|||||||||||||||||||||| ||||||||||||||| |||||
Sbjct: 327 ccacttccacgactgcttcgtccagggctgcgacgcgtcggtgct 371
Score = 56.0 bits (28), Expect = 3e-006
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 439 cgtggtgtcctgcgccgacatcgtcgcgctcgccgcccgcgactccgt 486
|||||| |||||| |||||||| | ||||||||||| |||||||||||
Sbjct: 495 cgtggtctcctgctccgacatcctggcgctcgccgcgcgcgactccgt 542
>gb|BI950074.1|BI950074 HVSMEl0018F18f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0018F18f, mRNA sequence
Length = 871
Score = 65.9 bits (33), Expect = 4e-009
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 280 ccacttccacgactgcttcgtcaggggctgcgacgcgtcagtgct 324
|||||||||||||||||||||| ||||||||||||||| |||||
Sbjct: 47 ccacttccacgactgcttcgtccagggctgcgacgcgtcggtgct 91
Score = 56.0 bits (28), Expect = 3e-006
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 439 cgtggtgtcctgcgccgacatcgtcgcgctcgccgcccgcgactccgt 486
|||||| |||||| |||||||| | ||||||||||| |||||||||||
Sbjct: 215 cgtggtctcctgctccgacatcctggcgctcgccgcgcgcgactccgt 262
>gb|BG417113.2|BG417113 HVSMEk0016F06f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0016F06f, mRNA sequence
Length = 475
Score = 65.9 bits (33), Expect = 4e-009
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 280 ccacttccacgactgcttcgtcaggggctgcgacgcgtcagtgct 324
|||||||||||||||||||||| ||||||||||||||| |||||
Sbjct: 107 ccacttccacgactgcttcgtccagggctgcgacgcgtcggtgct 151
Score = 44.1 bits (22), Expect = 0.013
Identities = 41/48 (85%)
Strand = Plus / Plus
Query: 439 cgtggtgtcctgcgccgacatcgtcgcgctcgccgcccgcgactccgt 486
|||||| |||||| ||||||| | ||||||||||| ||||||| |||
Sbjct: 275 cgtggtctcctgctccgacatnctggcgctcgccgcgcgcgactncgt 322
>gb|AL509011.1|AL509011 AL509011 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY10H08V 5',
mRNA sequence
Length = 655
Score = 63.9 bits (32), Expect = 1e-008
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 280 ccacttccacgactgcttcgtcaggggctgcgacgcgtcagtgctgct 327
|||||||||||||||||||||| ||| ||||||||||| ||||||||
Sbjct: 237 ccacttccacgactgcttcgtccaggggtgcgacgcgtcggtgctgct 284
Score = 61.9 bits (31), Expect = 6e-008
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 446 tcctgcgccgacatcgtcgcgctcgccgcccgcgactccgtcg 488
|||||| |||||||| | |||||||||||||||||||||||||
Sbjct: 412 tcctgctccgacatcctggcgctcgccgcccgcgactccgtcg 454
>gb|BF628685.2|BF628685 HVSMEb0007A23f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0007A23f, mRNA sequence
Length = 701
Score = 63.9 bits (32), Expect = 1e-008
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 284 ttccacgactgcttcgtcaggggctgcgacgcgtcagtgctgct 327
|||||||||||||||||| ||||||||||||| || ||||||||
Sbjct: 265 ttccacgactgcttcgtccggggctgcgacgcctccgtgctgct 308
>gb|BG301055.1|BG301055 HVSMEb0019H01f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0019H01f, mRNA sequence
Length = 579
Score = 63.9 bits (32), Expect = 1e-008
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 284 ttccacgactgcttcgtcaggggctgcgacgcgtcagtgctgct 327
|||||||||||||||||| ||||||||||||| || ||||||||
Sbjct: 191 ttccacgactgcttcgtccggggctgcgacgcctccgtgctgct 234
>gb|BF619877.2|BF619877 HVSMEc0009I18f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0009I18f, mRNA sequence
Length = 588
Score = 63.9 bits (32), Expect = 1e-008
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 284 ttccacgactgcttcgtcaggggctgcgacgcgtcagtgctgct 327
|||||||||||||||||| ||||||||||||| || ||||||||
Sbjct: 211 ttccacgactgcttcgtccggggctgcgacgcctccgtgctgct 254
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 221,956
Number of Sequences: 312970
Number of extensions: 221956
Number of successful extensions: 67544
Number of sequences better than 0.5: 409
Number of HSP's better than 0.5 without gapping: 402
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 66375
Number of HSP's gapped (non-prelim): 1161
length of query: 1469
length of database: 175,134,539
effective HSP length: 19
effective length of query: 1450
effective length of database: 169,188,109
effective search space: 245322758050
effective search space used: 245322758050
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)