BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2440612.2.2
(665 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AL505735.1|AL505735 AL505735 Hordeum vulgare Barke roots... 123 8e-027
gb|AL507675.1|AL507675 AL507675 Hordeum vulgare Barke devel... 123 8e-027
gb|BI958381.1|BI958381 HVSMEn0014L08f Hordeum vulgare rachi... 123 8e-027
gb|BE456005.3|BE456005 HVSMEg0019D20f Hordeum vulgare pre-a... 123 8e-027
gb|BQ470689.1|BQ470689 HX03L16r HX Hordeum vulgare subsp. v... 123 8e-027
gb|BU967751.1|BU967751 HB05E17r BC Hordeum vulgare subsp. v... 123 8e-027
gb|BU989449.1|BU989449 HF21M08r HF Hordeum vulgare subsp. v... 123 8e-027
gb|BU998195.1|BU998195 HI10E15r HI Hordeum vulgare subsp. v... 123 8e-027
gb|CA003405.1|CA003405 HS14F13r HS Hordeum vulgare subsp. v... 123 8e-027
gb|CA005817.1|CA005817 HU08K17u HU Hordeum vulgare subsp. v... 123 8e-027
gb|CA020390.1|CA020390 HZ36C12r HZ Hordeum vulgare subsp. v... 123 8e-027
gb|CA021107.1|CA021107 HZ39C03r HZ Hordeum vulgare subsp. v... 123 8e-027
gb|CA021876.1|CA021876 HZ41G17r HZ Hordeum vulgare subsp. v... 123 8e-027
gb|CA024087.1|CA024087 HZ48F06r HZ Hordeum vulgare subsp. v... 123 8e-027
gb|CA024227.1|CA024227 HZ48L14r HZ Hordeum vulgare subsp. v... 123 8e-027
gb|CA024286.1|CA024286 HZ48O03r HZ Hordeum vulgare subsp. v... 123 8e-027
gb|CA024533.1|CA024533 HZ49J05r HZ Hordeum vulgare subsp. v... 123 8e-027
gb|CA024986.1|CA024986 HZ50O09r HZ Hordeum vulgare subsp. v... 123 8e-027
gb|CA025799.1|CA025799 HZ53C22r HZ Hordeum vulgare subsp. v... 123 8e-027
gb|CA026240.1|CA026240 HZ55F09r HZ Hordeum vulgare subsp. v... 123 8e-027
gb|CA031942.1|CA031942 HX11J01r HX Hordeum vulgare subsp. v... 123 8e-027
gb|CA032116.1|CA032116 HX12B02r HX Hordeum vulgare subsp. v... 123 8e-027
gb|CA032223.1|CA032223 HX12G08r HX Hordeum vulgare subsp. v... 123 8e-027
gb|CB859380.1|CB859380 HI10E15w HI Hordeum vulgare subsp. v... 123 8e-027
gb|CB876023.1|CB876023 HX10A22w HX Hordeum vulgare subsp. v... 123 8e-027
gb|CB876529.1|CB876529 HX11J01w HX Hordeum vulgare subsp. v... 123 8e-027
gb|AL510956.1|AL510956 AL510956 Hordeum vulgare Barke devel... 117 5e-025
gb|BI957750.1|BI957750 HVSMEn0011A06f Hordeum vulgare rachi... 117 5e-025
gb|BM100389.2|BM100389 EBma01_SQ005_B05_R maternal, 4 DPA, ... 117 5e-025
gb|BQ757010.1|BQ757010 EBem10_SQ002_I03_R embryo, 2 Day ger... 117 5e-025
gb|BQ767032.1|BQ767032 EBro08_SQ007_G20_R root, 3 week, dro... 117 5e-025
gb|BG342887.2|BG342887 HVSMEg0001C01f Hordeum vulgare pre-a... 115 2e-024
gb|AJ436584.1|AJ436584 AJ436584 S00002 Hordeum vulgare subs... 115 2e-024
gb|BM100577.2|BM100577 EBma01_SQ005_K04_R maternal, 4 DPA, ... 115 2e-024
gb|BM373018.2|BM373018 EBma04_SQ002_M04_R maternal, 10 DPA,... 115 2e-024
gb|BM100853.2|BM100853 EBpi01_SQ002_D01_R pistil, 1 DPA, no... 115 2e-024
gb|BM100865.2|BM100865 EBpi01_SQ002_D15_R pistil, 1 DPA, no... 115 2e-024
gb|BM101328.2|BM101328 EBpi01_SQ003_I17_R pistil, 1 DPA, no... 115 2e-024
gb|BQ761886.1|BQ761886 EBpi01_SQ005_M05_R pistil, 1 DPA, no... 115 2e-024
gb|BQ764803.1|BQ764803 EBca01_SQ004_O22_R carpel, pre-anthe... 115 2e-024
gb|BQ765283.1|BQ765283 EBro03_SQ006_A20_R root, 3 week, wat... 115 2e-024
gb|AL512123.1|AL512123 AL512123 Hordeum vulgare Barke devel... 109 1e-022
gb|BF629069.2|BF629069 HVSMEb0009M06f Hordeum vulgare seedl... 109 1e-022
gb|BE231073.2|BE231073 HVSMEg0016F11f Hordeum vulgare pre-a... 109 1e-022
gb|BG344662.2|BG344662 HVSMEg0009P10f Hordeum vulgare pre-a... 109 1e-022
gb|AW983351.3|AW983351 HVSMEg0010F06f Hordeum vulgare pre-a... 109 1e-022
gb|BJ464544.1|BJ464544 BJ464544 K. Sato unpublished cDNA li... 109 1e-022
gb|BJ466896.1|BJ466896 BJ466896 K. Sato unpublished cDNA li... 109 1e-022
gb|BQ470043.1|BQ470043 HX01J18T HX Hordeum vulgare subsp. v... 109 1e-022
gb|BQ664970.1|BQ664970 HX01J18w HX Hordeum vulgare subsp. v... 109 1e-022
gb|BU994236.1|BU994236 HM06E11r HM Hordeum vulgare subsp. v... 109 1e-022
gb|BU995398.1|BU995398 HM10C07r HM Hordeum vulgare subsp. v... 109 1e-022
gb|CA032981.1|CA032981 HX14M06r HX Hordeum vulgare subsp. v... 109 1e-022
gb|CB880350.1|CB880350 HM06E11w HM Hordeum vulgare subsp. v... 109 1e-022
gb|AL509014.1|AL509014 AL509014 Hordeum vulgare Barke devel... 107 5e-022
gb|BU986448.1|BU986448 HF11O09r HF Hordeum vulgare subsp. v... 107 5e-022
gb|BU999151.1|BU999151 HI13G21r HI Hordeum vulgare subsp. v... 107 5e-022
gb|CA031724.1|CA031724 HX10P03r HX Hordeum vulgare subsp. v... 107 5e-022
gb|CB881547.1|CB881547 HM10C07w HM Hordeum vulgare subsp. v... 107 5e-022
gb|BG343826.2|BG343826 HVSMEg0006N18f Hordeum vulgare pre-a... 105 2e-021
gb|BJ453363.1|BJ453363 BJ453363 K. Sato unpublished cDNA li... 105 2e-021
gb|BJ460908.1|BJ460908 BJ460908 K. Sato unpublished cDNA li... 105 2e-021
gb|CA021624.1|CA021624 HZ40K01r HZ Hordeum vulgare subsp. v... 105 2e-021
gb|BM101377.2|BM101377 EBpi01_SQ003_K20_R pistil, 1 DPA, no... 94 7e-018
gb|CA021077.1|CA021077 HZ39A16r HZ Hordeum vulgare subsp. v... 92 3e-017
gb|BQ458414.1|BQ458414 HA05E20r HA Hordeum vulgare subsp. v... 86 2e-015
gb|BQ460125.1|BQ460125 HA07C10r HA Hordeum vulgare subsp. v... 86 2e-015
gb|BQ460484.1|BQ460484 HA09G20r HA Hordeum vulgare subsp. v... 86 2e-015
gb|BU976894.1|BU976894 HA10H22r HA Hordeum vulgare subsp. v... 86 2e-015
gb|BU976895.1|BU976895 HA10H22u HA Hordeum vulgare subsp. v... 86 2e-015
gb|BU977431.1|BU977431 HA11G17r HA Hordeum vulgare subsp. v... 86 2e-015
gb|BU977432.1|BU977432 HA11G17u HA Hordeum vulgare subsp. v... 86 2e-015
gb|BU978673.1|BU978673 HA13P05r HA Hordeum vulgare subsp. v... 86 2e-015
gb|BU982677.1|BU982677 HA27E12r HA Hordeum vulgare subsp. v... 86 2e-015
gb|BU982830.1|BU982830 HA27L20r HA Hordeum vulgare subsp. v... 86 2e-015
gb|BU983682.1|BU983682 HA30K06r HA Hordeum vulgare subsp. v... 86 2e-015
gb|BU984028.1|BU984028 HA31M10r HA Hordeum vulgare subsp. v... 86 2e-015
gb|BU984085.1|BU984085 HA31P03r HA Hordeum vulgare subsp. v... 86 2e-015
gb|BU990341.1|BU990341 HF24L23r HF Hordeum vulgare subsp. v... 86 2e-015
gb|CA020846.1|CA020846 HZ38A15r HZ Hordeum vulgare subsp. v... 86 2e-015
gb|CA020870.1|CA020870 HZ38C17r HZ Hordeum vulgare subsp. v... 86 2e-015
gb|CA023557.1|CA023557 HZ46K07r HZ Hordeum vulgare subsp. v... 86 2e-015
gb|CA024265.1|CA024265 HZ48N06r HZ Hordeum vulgare subsp. v... 86 2e-015
gb|CK122981.1|CK122981 BES1824101k07 BES1824 Hordeum vulgar... 86 2e-015
gb|CK123606.1|CK123606 BES1824104l05 BES1824 Hordeum vulgar... 86 2e-015
gb|CK124372.1|CK124372 BES1824108i15 BES1824 Hordeum vulgar... 86 2e-015
gb|AV832445.1|AV832445 AV832445 K. Sato unpublished cDNA li... 84 7e-015
gb|BQ754272.1|BQ754272 EBca01_SQ003_G10_R carpel, pre-anthe... 84 7e-015
gb|BF626646.2|BF626646 HVSMEa0018P22f Hordeum vulgare seedl... 78 4e-013
gb|BF257573.2|BF257573 HVSMEf0013I19f Hordeum vulgare seedl... 78 4e-013
gb|BE194075.3|BE194075 HVSMEh0083N15f Hordeum vulgare 5-45 ... 78 4e-013
gb|BG414807.2|BG414807 HVSMEk0003M19f Hordeum vulgare testa... 78 4e-013
gb|BG417109.2|BG417109 HVSMEk0016F02f Hordeum vulgare testa... 78 4e-013
gb|AV925290.1|AV925290 AV925290 K. Sato unpublished cDNA li... 78 4e-013
gb|AV930444.1|AV930444 AV930444 K. Sato unpublished cDNA li... 78 4e-013
gb|BI780562.2|BI780562 EBes01_SQ001_D19_R embryo sac, 4-6 D... 78 4e-013
gb|BM101443.2|BM101443 EBpi01_SQ003_N21_R pistil, 1 DPA, no... 78 4e-013
gb|BI776654.2|BI776654 EBpi07_SQ001_E15_R pistil, 12 DPA, n... 78 4e-013
gb|BM370037.2|BM370037 EBro08_SQ002_M09_R root, 3 week, dro... 78 4e-013
gb|BQ763997.1|BQ763997 EBro03_SQ006_A05_R root, 3 week, wat... 78 4e-013
gb|CK122605.1|CK122605 BES1824104j18 BES1824 Hordeum vulgar... 78 4e-013
gb|BE194162.2|BE194162 HVSMEh0084F17f Hordeum vulgare 5-45 ... 70 1e-010
gb|BG414760.1|BG414760 HVSMEk0003K03f Hordeum vulgare testa... 70 1e-010
gb|BM372843.2|BM372843 EBma04_SQ002_B24_R maternal, 10 DPA,... 70 1e-010
gb|BG414415.1|BG414415 HVSMEk0002G24f Hordeum vulgare testa... 62 2e-008
gb|BG417887.1|BG417887 HVSMEk0019O02f Hordeum vulgare testa... 60 1e-007
gb|BG367131.2|BG367131 HVSMEi0010M06f Hordeum vulgare 20 DA... 60 1e-007
gb|AV925299.1|AV925299 AV925299 K. Sato unpublished cDNA li... 60 1e-007
gb|BE422345.1|BE422345 HWM023cB.07r ITEC HWM Barley Leaf Li... 58 4e-007
gb|BF622447.2|BF622447 HVSMEa0004F03f Hordeum vulgare seedl... 58 4e-007
gb|BE194527.2|BE194527 HVSMEh0085O08f Hordeum vulgare 5-45 ... 58 4e-007
gb|BQ657163.1|BQ657163 HA09G20u HA Hordeum vulgare subsp. v... 58 4e-007
gb|BQ657749.1|BQ657749 HA07C10u HA Hordeum vulgare subsp. v... 58 4e-007
gb|BM441819.2|BM441819 EBed07_SQ001_K08_R endosperm, 28 DPA... 58 4e-007
gb|BQ755202.1|BQ755202 EBed07_SQ001_P21_R endosperm, 28 DPA... 58 4e-007
gb|BU967182.1|BU967182 HB03I09r BC Hordeum vulgare subsp. v... 56 2e-006
gb|BU967570.1|BU967570 HB04L07r BC Hordeum vulgare subsp. v... 56 2e-006
gb|BU968181.1|BU968181 HB06L01r BC Hordeum vulgare subsp. v... 56 2e-006
gb|BU968194.1|BU968194 HB06L14r BC Hordeum vulgare subsp. v... 56 2e-006
gb|BU975545.1|BU975545 HB31H19r BC Hordeum vulgare subsp. v... 56 2e-006
gb|BU975871.1|BU975871 HB32I22r BC Hordeum vulgare subsp. v... 56 2e-006
gb|BU984366.1|BU984366 HF03L17r HF Hordeum vulgare subsp. v... 56 2e-006
gb|CA012829.1|CA012829 HT06J05r HT Hordeum vulgare subsp. v... 56 2e-006
gb|CV054446.1|CV054446 BNEL10F10 Barley EST endosperm libra... 56 2e-006
gb|CV054686.1|CV054686 BNEL112b8 Barley EST endosperm libra... 56 2e-006
gb|CV057326.1|CV057326 BNEL26e6 Barley EST endosperm librar... 56 2e-006
gb|CV057555.1|CV057555 BNEL29b5 Barley EST endosperm librar... 56 2e-006
gb|CV059057.1|CV059057 BNEL43h3 Barley EST endosperm librar... 56 2e-006
gb|CV060822.1|CV060822 BNEL61f11 Barley EST endosperm libra... 56 2e-006
gb|BM377547.1|BM377547 EBem04_SQ003_H11_R embryo, 12 DPA, n... 54 6e-006
gb|BQ464026.1|BQ464026 HF01C09T HF Hordeum vulgare subsp. v... 54 6e-006
gb|BQ659635.1|BQ659635 HF01C09w HF Hordeum vulgare subsp. v... 54 6e-006
gb|BQ661645.1|BQ661645 HM04I05u HM Hordeum vulgare subsp. v... 54 6e-006
gb|BM377151.2|BM377151 EBem05_SQ004_E10_R embryo, 14 DPA, n... 54 6e-006
gb|BM096593.2|BM096593 EBem06_SQ001_P04_R embryo, 21 DPA, n... 54 6e-006
gb|BM369646.2|BM369646 EBem07_SQ004_D12_R embryo, 28 DPA, n... 54 6e-006
gb|BM369664.2|BM369664 EBem07_SQ004_E07_R embryo, 28 DPA, n... 54 6e-006
gb|BM099214.2|BM099214 EBes01_SQ002_J02_R embryo sac, 4-6 D... 54 6e-006
gb|BI777376.2|BI777376 EBro04_SQ001_A12_R root, 3 week, sal... 54 6e-006
gb|BU969935.1|BU969935 HB13B13r BC Hordeum vulgare subsp. v... 54 6e-006
gb|BU983109.1|BU983109 HA28J09r HA Hordeum vulgare subsp. v... 54 6e-006
gb|BU984694.1|BU984694 HF04L08r HF Hordeum vulgare subsp. v... 54 6e-006
gb|BU985142.1|BU985142 HF06E05r HF Hordeum vulgare subsp. v... 54 6e-006
gb|CA011721.1|CA011721 HT03F21r HT Hordeum vulgare subsp. v... 54 6e-006
gb|CA024274.1|CA024274 HZ48N15r HZ Hordeum vulgare subsp. v... 54 6e-006
gb|BM369430.2|BM369430 EBem07_SQ003_I24_R embryo, 28 DPA, n... 52 2e-005
gb|AL506551.1|AL506551 AL506551 Hordeum vulgare Barke devel... 50 9e-005
gb|AL507041.1|AL507041 AL507041 Hordeum vulgare Barke devel... 50 9e-005
gb|AL507454.1|AL507454 AL507454 Hordeum vulgare Barke devel... 50 9e-005
gb|AL507757.1|AL507757 AL507757 Hordeum vulgare Barke devel... 50 9e-005
gb|AL507836.1|AL507836 AL507836 Hordeum vulgare Barke devel... 50 9e-005
gb|AL509985.1|AL509985 AL509985 Hordeum vulgare Barke devel... 50 9e-005
gb|AL510700.1|AL510700 AL510700 Hordeum vulgare Barke devel... 50 9e-005
gb|AL511099.1|AL511099 AL511099 Hordeum vulgare Barke devel... 50 9e-005
gb|BF621368.2|BF621368 HVSMEa0006K17f Hordeum vulgare seedl... 50 9e-005
gb|BG417491.1|BG417491 HVSMEk0017M20f Hordeum vulgare testa... 50 9e-005
gb|BF255045.3|BF255045 HVSMEf0005M15f Hordeum vulgare seedl... 50 9e-005
gb|BG415395.2|BG415395 HVSMEk0006F02f Hordeum vulgare testa... 50 9e-005
gb|BQ459549.1|BQ459549 HA08M20r HA Hordeum vulgare subsp. v... 50 9e-005
gb|BQ460749.1|BQ460749 HA06A23r HA Hordeum vulgare subsp. v... 50 9e-005
gb|BQ659857.1|BQ659857 HF01P05w HF Hordeum vulgare subsp. v... 50 9e-005
gb|BM375773.2|BM375773 EBem06_SQ004_G01_R embryo, 21 DPA, n... 50 9e-005
gb|BI780486.2|BI780486 EBem08_SQ001_G15_R embryo, 40 DPA, n... 50 9e-005
gb|BI781176.2|BI781176 EBma03_SQ001_K20_R maternal, 8 DPA, ... 50 9e-005
gb|BI780952.2|BI780952 EBma05_SQ001_K14_R maternal, 12 DPA,... 50 9e-005
gb|BQ755122.1|BQ755122 EBed02_SQ003_M15_R endosperm, 8 DPA,... 50 9e-005
gb|BQ758595.1|BQ758595 EBma07_SQ002_P05_R maternal, 21 DPA,... 50 9e-005
gb|BQ758929.1|BQ758929 EBma07_SQ003_C08_R maternal, 21 DPA,... 50 9e-005
gb|BQ758967.1|BQ758967 EBma07_SQ003_J10_R maternal, 21 DPA,... 50 9e-005
gb|BQ759130.1|BQ759130 EBma07_SQ003_K20_R maternal, 21 DPA,... 50 9e-005
gb|BQ759732.1|BQ759732 EBpi05_SQ004_A09_R pistil, 8 DPA, no... 50 9e-005
gb|BQ763071.1|BQ763071 EBro02_SQ007_H03_R root, 3 week, hyd... 50 9e-005
gb|BQ767403.1|BQ767403 EBro08_SQ008_F22_R root, 3 week, dro... 50 9e-005
gb|BU967738.1|BU967738 HB05E01r BC Hordeum vulgare subsp. v... 50 9e-005
gb|BU967997.1|BU967997 HB06A10r BC Hordeum vulgare subsp. v... 50 9e-005
gb|BU968175.1|BU968175 HB06K18r BC Hordeum vulgare subsp. v... 50 9e-005
gb|BU970288.1|BU970288 HB14D06r BC Hordeum vulgare subsp. v... 50 9e-005
gb|BU970444.1|BU970444 HB14K15r BC Hordeum vulgare subsp. v... 50 9e-005
gb|BU970643.1|BU970643 HB15E06r BC Hordeum vulgare subsp. v... 50 9e-005
gb|BU971210.1|BU971210 HB16P01r BC Hordeum vulgare subsp. v... 50 9e-005
gb|BU972811.1|BU972811 HB22M16r BC Hordeum vulgare subsp. v... 50 9e-005
gb|BU973219.1|BU973219 HB24C16r BC Hordeum vulgare subsp. v... 50 9e-005
gb|BU974135.1|BU974135 HB26P24r BC Hordeum vulgare subsp. v... 50 9e-005
gb|BU974879.1|BU974879 HB29G04r BC Hordeum vulgare subsp. v... 50 9e-005
gb|BU976406.1|BU976406 HA03K14r HA Hordeum vulgare subsp. v... 50 9e-005
gb|BU976561.1|BU976561 HA03O15r HA Hordeum vulgare subsp. v... 50 9e-005
gb|BU976562.1|BU976562 HA03O15u HA Hordeum vulgare subsp. v... 50 9e-005
gb|BU978352.1|BU978352 HA12P17r HA Hordeum vulgare subsp. v... 50 9e-005
gb|BU978353.1|BU978353 HA12P17u HA Hordeum vulgare subsp. v... 50 9e-005
gb|BU978699.1|BU978699 HA14A11r HA Hordeum vulgare subsp. v... 50 9e-005
gb|BU980804.1|BU980804 HA21L22r HA Hordeum vulgare subsp. v... 50 9e-005
gb|BU982212.1|BU982212 HA25N15r HA Hordeum vulgare subsp. v... 50 9e-005
gb|BU982721.1|BU982721 HA27G17r HA Hordeum vulgare subsp. v... 50 9e-005
gb|BU986233.1|BU986233 HF11B22r HF Hordeum vulgare subsp. v... 50 9e-005
gb|BU986838.1|BU986838 HF13A22r HF Hordeum vulgare subsp. v... 50 9e-005
gb|BU990518.1|BU990518 HF25E16r HF Hordeum vulgare subsp. v... 50 9e-005
gb|BU990756.1|BU990756 HF25P14r HF Hordeum vulgare subsp. v... 50 9e-005
gb|BU995475.1|BU995475 HM10F24r HM Hordeum vulgare subsp. v... 50 9e-005
gb|CA016559.1|CA016559 HV08F01u HV Hordeum vulgare subsp. v... 50 9e-005
gb|CA017675.1|CA017675 HV05O06r HV Hordeum vulgare subsp. v... 50 9e-005
gb|CA018328.1|CA018328 HV08F01r HV Hordeum vulgare subsp. v... 50 9e-005
gb|CA023611.1|CA023611 HZ46M23r HZ Hordeum vulgare subsp. v... 50 9e-005
gb|CV056134.1|CV056134 BNEL14C8 Barley EST endosperm librar... 48 4e-004
gb|CV063068.1|CV063068 BNEL86c5 Barley EST endosperm librar... 48 4e-004
gb|BQ754686.1|BQ754686 EBed01_SQ003_I10_R endosperm, 6 DPA,... 46 0.001
gb|AV921843.1|AV921843 AV921843 K. Sato unpublished cDNA li... 44 0.006
gb|AL507680.1|AL507680 AL507680 Hordeum vulgare Barke devel... 42 0.023
gb|BE213850.1|BE213850 HV_CEb0001H05f Hordeum vulgare seedl... 42 0.023
gb|BF064888.1|BF064888 HV_CEb0021H16f Hordeum vulgare seedl... 42 0.023
gb|BM444343.1|BM444343 EBem09_SQ004_O01_R embryo, 1 Day ger... 42 0.023
gb|BQ458827.1|BQ458827 HA04B18r HA Hordeum vulgare subsp. v... 42 0.023
gb|BQ465106.1|BQ465106 HU02K20r HU Hordeum vulgare subsp. v... 42 0.023
gb|BQ665060.1|BQ665060 HX01P07w HX Hordeum vulgare subsp. v... 42 0.023
gb|BM377924.2|BM377924 EBem04_SQ004_J18_R embryo, 12 DPA, n... 42 0.023
gb|BM376197.2|BM376197 EBma01_SQ002_K07_R maternal, 4 DPA, ... 42 0.023
gb|BI777456.2|BI777456 EBro04_SQ001_E12_R root, 3 week, sal... 42 0.023
gb|BQ759483.1|BQ759483 EBpi01_SQ004_L13_R pistil, 1 DPA, no... 42 0.023
gb|BQ762097.1|BQ762097 EBpi01_SQ005_E24_R pistil, 1 DPA, no... 42 0.023
gb|BU979589.1|BU979589 HA16K07r HA Hordeum vulgare subsp. v... 42 0.023
gb|BU981619.1|BU981619 HA24C09r HA Hordeum vulgare subsp. v... 42 0.023
gb|BU981771.1|BU981771 HA24J13r HA Hordeum vulgare subsp. v... 42 0.023
gb|BU995298.1|BU995298 HM09M23r HM Hordeum vulgare subsp. v... 42 0.023
gb|CA015527.1|CA015527 HT14J10r HT Hordeum vulgare subsp. v... 42 0.023
gb|CA018671.1|CA018671 HV09F02r HV Hordeum vulgare subsp. v... 42 0.023
gb|BG299654.1|BG299654 HVSMEa0021E14f Hordeum vulgare seedl... 40 0.090
gb|BI953147.1|BI953147 HVSMEm0011F08f Hordeum vulgare green... 40 0.090
gb|BE215814.2|BE215814 HV_CEb0008I24f Hordeum vulgare seedl... 40 0.090
gb|BF065801.2|BF065801 HV_CEb0014A14f Hordeum vulgare seedl... 40 0.090
gb|BG344546.2|BG344546 HVSMEg0009J11f Hordeum vulgare pre-a... 40 0.090
gb|AW983383.3|AW983383 HVSMEg0010H04f Hordeum vulgare pre-a... 40 0.090
gb|BG344703.2|BG344703 HVSMEg0015E09f Hordeum vulgare pre-a... 40 0.090
gb|BM374293.1|BM374293 EBpi03_SQ003_D14_R pistil, 4 DPA, no... 40 0.090
gb|BM442949.2|BM442949 EBro02_SQ002_A04_R root, 3 week, hyd... 40 0.090
gb|CB882480.1|CB882480 HL01P17w HL Hordeum vulgare subsp. v... 40 0.090
gb|CV061340.1|CV061340 BNEL67f9 Barley EST endosperm librar... 40 0.090
gb|AL503237.1|AL503237 AL503237 Hordeum vulgare Barke roots... 38 0.36
gb|AL509094.1|AL509094 AL509094 Hordeum vulgare Barke devel... 38 0.36
gb|AL510775.1|AL510775 AL510775 Hordeum vulgare Barke devel... 38 0.36
gb|AL511541.1|AL511541 AL511541 Hordeum vulgare Barke devel... 38 0.36
gb|BG345147.1|BG345147 HVSMEg0018O07f Hordeum vulgare pre-a... 38 0.36
gb|BI950878.1|BI950878 HVSMEl0023I05f Hordeum vulgare spike... 38 0.36
gb|BE558241.2|BE558241 HV_CEb0015L04f Hordeum vulgare seedl... 38 0.36
gb|BF259540.2|BF259540 HVSMEf0019J16f Hordeum vulgare seedl... 38 0.36
gb|BF629257.3|BF629257 HVSMEb0010I15f Hordeum vulgare seedl... 38 0.36
gb|BG365764.2|BG365764 HVSMEi0004B24f Hordeum vulgare 20 DA... 38 0.36
gb|BG368956.2|BG368956 HVSMEi0021I08f Hordeum vulgare 20 DA... 38 0.36
gb|BG416632.2|BG416632 HVSMEk0013M10f Hordeum vulgare testa... 38 0.36
gb|AV922123.1|AV922123 AV922123 K. Sato unpublished cDNA li... 38 0.36
gb|AV922303.1|AV922303 AV922303 K. Sato unpublished cDNA li... 38 0.36
gb|AJ462745.1|AJ462745 AJ462745 S00002 Hordeum vulgare subs... 38 0.36
gb|BJ466751.1|BJ466751 BJ466751 K. Sato unpublished cDNA li... 38 0.36
gb|BJ475949.1|BJ475949 BJ475949 K. Sato unpublished cDNA li... 38 0.36
gb|BQ459350.1|BQ459350 HA01G13r HA Hordeum vulgare subsp. v... 38 0.36
gb|BQ464539.1|BQ464539 HF02J03r HF Hordeum vulgare subsp. v... 38 0.36
gb|BQ471694.1|BQ471694 HV03D03r HV Hordeum vulgare subsp. v... 38 0.36
gb|BQ657282.1|BQ657282 HA08P11u HA Hordeum vulgare subsp. v... 38 0.36
gb|BQ657684.1|BQ657684 HA07G15u HA Hordeum vulgare subsp. v... 38 0.36
gb|BQ658123.1|BQ658123 HA05J16u HA Hordeum vulgare subsp. v... 38 0.36
gb|BQ665045.1|BQ665045 HX01O11w HX Hordeum vulgare subsp. v... 38 0.36
gb|BI776227.2|BI776227 EBem04_SQ001_B03_R embryo, 12 DPA, n... 38 0.36
gb|BM100806.2|BM100806 EBpi01_SQ002_A24_R pistil, 1 DPA, no... 38 0.36
gb|BI777961.2|BI777961 EBro07_SQ001_I10_R root, 3 week, red... 38 0.36
gb|BQ757555.1|BQ757555 EBem10_SQ004_H23_R embryo, 2 Day ger... 38 0.36
gb|BQ764792.1|BQ764792 EBca01_SQ004_M21_R carpel, pre-anthe... 38 0.36
gb|BU982994.1|BU982994 HA28D16r HA Hordeum vulgare subsp. v... 38 0.36
gb|BU988113.1|BU988113 HF16L06r HF Hordeum vulgare subsp. v... 38 0.36
gb|BU989273.1|BU989273 HF21E13r HF Hordeum vulgare subsp. v... 38 0.36
gb|BU990708.1|BU990708 HF25N07r HF Hordeum vulgare subsp. v... 38 0.36
gb|BU995518.1|BU995518 HM10H24r HM Hordeum vulgare subsp. v... 38 0.36
gb|CA004911.1|CA004911 HU13D21u HU Hordeum vulgare subsp. v... 38 0.36
gb|CA016921.1|CA016921 HV05J03u HV Hordeum vulgare subsp. v... 38 0.36
gb|CA019077.1|CA019077 HV10K21r HV Hordeum vulgare subsp. v... 38 0.36
gb|CB858767.1|CB858767 HI08E05w HI Hordeum vulgare subsp. v... 38 0.36
gb|CB876449.1|CB876449 HX11E24w HX Hordeum vulgare subsp. v... 38 0.36
gb|CB877280.1|CB877280 HP04D18T HP Hordeum vulgare subsp. v... 38 0.36
gb|CD663545.1|CD663545 UCRHV18_05dd05_b1 Drought-stressed D... 38 0.36
gb|CV057292.1|CV057292 BNEL26b6 Barley EST endosperm librar... 38 0.36
gb|CK124549.1|CK124549 BES1824109i06 BES1824 Hordeum vulgar... 38 0.36
gb|AF509775.1| Hordeum vulgare subsp. vulgare isolate RSB40... 38 0.36
>gb|AL505735.1|AL505735 AL505735 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW09F22V 5', mRNA sequence
Length = 471
Score = 123 bits (62), Expect = 8e-027
Identities = 166/201 (82%), Gaps = 6/201 (2%)
Strand = Plus / Minus
Query: 350 gcactcgccgccggggaagttctcggtctggcacacgttggcgcagttgttgctgctcat 409
||||| |||| |||||||||||||||| |||| ||| |||||||||| ||||||| |
Sbjct: 282 gcactggccgtcggggaagttctcggtgcggcagacggcggcgcagttgctgctgctgag 223
Query: 410 gcacaggcccttgaaccggtggctctgcgacaggcagtgcctcgcctccgccacct---- 465
|||| |||||||||| |||||||||||||||||||| || ||||||||||||||
Sbjct: 222 gcacgtgcccttgaacttgtggctctgcgacaggcagtcccgcgcctccgccaccttcac 163
Query: 466 --tggtcgtccccagctctgtggcgacgaggaggagcaggaggacgaggacgggagccgc 523
| |||| ||||| |||||||||||||||||||||||| || | |||| ||| | ||
Sbjct: 162 cgtcgtcgcccccatctctgtggcgacgaggaggagcagcagcaggagggcggacccggc 103
Query: 524 catgcgtcgagacagcgccat 544
|||||| |||||| |||||||
Sbjct: 102 catgcgacgagactgcgccat 82
Score = 38.2 bits (19), Expect = 0.36
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 313 tcttgcagaagcacttgcg 331
|||||||||||||||||||
Sbjct: 319 tcttgcagaagcacttgcg 301
>gb|AL507675.1|AL507675 AL507675 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY06I14V 5',
mRNA sequence
Length = 606
Score = 123 bits (62), Expect = 8e-027
Identities = 166/201 (82%), Gaps = 6/201 (2%)
Strand = Plus / Plus
Query: 350 gcactcgccgccggggaagttctcggtctggcacacgttggcgcagttgttgctgctcat 409
||||| |||| |||||||||||||||| |||| ||| |||||||||| ||||||| |
Sbjct: 337 gcactggccgtcggggaagttctcggtgcggcagacggcggcgcagttgctgctgctgag 396
Query: 410 gcacaggcccttgaaccggtggctctgcgacaggcagtgcctcgcctccgccacct---- 465
|||| |||||||||| |||||||||||||||||||| || ||||||||||||||
Sbjct: 397 gcacgtgcccttgaacttgtggctctgcgacaggcagtcccgcgcctccgccaccttcac 456
Query: 466 --tggtcgtccccagctctgtggcgacgaggaggagcaggaggacgaggacgggagccgc 523
| |||| ||||| |||||||||||||||||||||||| || | |||| ||| | ||
Sbjct: 457 cgtcgtcgcccccatctctgtggcgacgaggaggagcagcagcaggagggcggacccggc 516
Query: 524 catgcgtcgagacagcgccat 544
|||||| |||||| |||||||
Sbjct: 517 catgcgacgagactgcgccat 537
Score = 38.2 bits (19), Expect = 0.36
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 313 tcttgcagaagcacttgcg 331
|||||||||||||||||||
Sbjct: 300 tcttgcagaagcacttgcg 318
>gb|BI958381.1|BI958381 HVSMEn0014L08f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0014L08f, mRNA sequence
Length = 526
Score = 123 bits (62), Expect = 8e-027
Identities = 166/201 (82%), Gaps = 6/201 (2%)
Strand = Plus / Minus
Query: 350 gcactcgccgccggggaagttctcggtctggcacacgttggcgcagttgttgctgctcat 409
||||| |||| |||||||||||||||| |||| ||| |||||||||| ||||||| |
Sbjct: 274 gcactggccgtcggggaagttctcggtgcggcagacggcggcgcagttgctgctgctgag 215
Query: 410 gcacaggcccttgaaccggtggctctgcgacaggcagtgcctcgcctccgccacct---- 465
|||| |||||||||| |||||||||||||||||||| || ||||||||||||||
Sbjct: 214 gcacgtgcccttgaacttgtggctctgcgacaggcagtcccgcgcctccgccaccttcac 155
Query: 466 --tggtcgtccccagctctgtggcgacgaggaggagcaggaggacgaggacgggagccgc 523
| |||| ||||| |||||||||||||||||||||||| || | |||| ||| | ||
Sbjct: 154 cgtcgtcgcccccatctctgtggcgacgaggaggagcagcagcaggagggcggacccggc 95
Query: 524 catgcgtcgagacagcgccat 544
|||||| |||||| |||||||
Sbjct: 94 catgcgacgagactgcgccat 74
Score = 38.2 bits (19), Expect = 0.36
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 313 tcttgcagaagcacttgcg 331
|||||||||||||||||||
Sbjct: 311 tcttgcagaagcacttgcg 293
>gb|BE456005.3|BE456005 HVSMEg0019D20f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0019D20f, mRNA sequence
Length = 614
Score = 123 bits (62), Expect = 8e-027
Identities = 166/201 (82%), Gaps = 6/201 (2%)
Strand = Plus / Minus
Query: 350 gcactcgccgccggggaagttctcggtctggcacacgttggcgcagttgttgctgctcat 409
||||| |||| |||||||||||||||| |||| ||| |||||||||| ||||||| |
Sbjct: 280 gcactggccgtcggggaagttctcggtgcggcagacggcggcgcagttgctgctgctgag 221
Query: 410 gcacaggcccttgaaccggtggctctgcgacaggcagtgcctcgcctccgccacct---- 465
|||| |||||||||| |||||||||||||||||||| || ||||||||||||||
Sbjct: 220 gcacgtgcccttgaacttgtggctctgcgacaggcagtcccgcgcctccgccaccttcac 161
Query: 466 --tggtcgtccccagctctgtggcgacgaggaggagcaggaggacgaggacgggagccgc 523
| |||| ||||| |||||||||||||||||||||||| || | |||| ||| | ||
Sbjct: 160 cgtcgtcgcccccatctctgtggcgacgaggaggagcagcagcaggagggcggacccggc 101
Query: 524 catgcgtcgagacagcgccat 544
|||||| |||||| |||||||
Sbjct: 100 catgcgacgagactgcgccat 80
Score = 38.2 bits (19), Expect = 0.36
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 313 tcttgcagaagcacttgcg 331
|||||||||||||||||||
Sbjct: 317 tcttgcagaagcacttgcg 299
>gb|BQ470689.1|BQ470689 HX03L16r HX Hordeum vulgare subsp. vulgare cDNA clone HX03L16
5-PRIME, mRNA sequence
Length = 496
Score = 123 bits (62), Expect = 8e-027
Identities = 166/201 (82%), Gaps = 6/201 (2%)
Strand = Plus / Minus
Query: 350 gcactcgccgccggggaagttctcggtctggcacacgttggcgcagttgttgctgctcat 409
||||| |||| |||||||||||||||| |||| ||| |||||||||| ||||||| |
Sbjct: 294 gcactggccgtcggggaagttctcggtgcggcagacggcggcgcagttgctgctgctgag 235
Query: 410 gcacaggcccttgaaccggtggctctgcgacaggcagtgcctcgcctccgccacct---- 465
|||| |||||||||| |||||||||||||||||||| || ||||||||||||||
Sbjct: 234 gcacgtgcccttgaacttgtggctctgcgacaggcagtcccgcgcctccgccaccttcac 175
Query: 466 --tggtcgtccccagctctgtggcgacgaggaggagcaggaggacgaggacgggagccgc 523
| |||| ||||| |||||||||||||||||||||||| || | |||| ||| | ||
Sbjct: 174 cgtcgtcgcccccatctctgtggcgacgaggaggagcagcagcaggagggcggacccggc 115
Query: 524 catgcgtcgagacagcgccat 544
|||||| |||||| |||||||
Sbjct: 114 catgcgacgagactgcgccat 94
Score = 38.2 bits (19), Expect = 0.36
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 313 tcttgcagaagcacttgcg 331
|||||||||||||||||||
Sbjct: 331 tcttgcagaagcacttgcg 313
>gb|BU967751.1|BU967751 HB05E17r BC Hordeum vulgare subsp. vulgare cDNA clone HB05E17
5-PRIME, mRNA sequence
Length = 441
Score = 123 bits (62), Expect = 8e-027
Identities = 166/201 (82%), Gaps = 6/201 (2%)
Strand = Plus / Minus
Query: 350 gcactcgccgccggggaagttctcggtctggcacacgttggcgcagttgttgctgctcat 409
||||| |||| |||||||||||||||| |||| ||| |||||||||| ||||||| |
Sbjct: 294 gcactggccgtcggggaagttctcggtgcggcagacggcggcgcagttgctgctgctgag 235
Query: 410 gcacaggcccttgaaccggtggctctgcgacaggcagtgcctcgcctccgccacct---- 465
|||| |||||||||| |||||||||||||||||||| || ||||||||||||||
Sbjct: 234 gcacgtgcccttgaacttgtggctctgcgacaggcagtcccgcgcctccgccaccttcac 175
Query: 466 --tggtcgtccccagctctgtggcgacgaggaggagcaggaggacgaggacgggagccgc 523
| |||| ||||| |||||||||||||||||||||||| || | |||| ||| | ||
Sbjct: 174 cgtcgtcgcccccatctctgtggcgacgaggaggagcagcagcaggagggcggacccggc 115
Query: 524 catgcgtcgagacagcgccat 544
|||||| |||||| |||||||
Sbjct: 114 catgcgacgagactgcgccat 94
Score = 38.2 bits (19), Expect = 0.36
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 313 tcttgcagaagcacttgcg 331
|||||||||||||||||||
Sbjct: 331 tcttgcagaagcacttgcg 313
>gb|BU989449.1|BU989449 HF21M08r HF Hordeum vulgare subsp. vulgare cDNA clone HF21M08
5-PRIME, mRNA sequence
Length = 523
Score = 123 bits (62), Expect = 8e-027
Identities = 166/201 (82%), Gaps = 6/201 (2%)
Strand = Plus / Minus
Query: 350 gcactcgccgccggggaagttctcggtctggcacacgttggcgcagttgttgctgctcat 409
||||| |||| |||||||||||||||| |||| ||| |||||||||| ||||||| |
Sbjct: 288 gcactggccgtcggggaagttctcggtgcggcagacggcggcgcagttgctgctgctgag 229
Query: 410 gcacaggcccttgaaccggtggctctgcgacaggcagtgcctcgcctccgccacct---- 465
|||| |||||||||| |||||||||||||||||||| || ||||||||||||||
Sbjct: 228 gcacgtgcccttgaacttgtggctctgcgacaggcagtcccgcgcctccgccaccttcac 169
Query: 466 --tggtcgtccccagctctgtggcgacgaggaggagcaggaggacgaggacgggagccgc 523
| |||| ||||| |||||||||||||||||||||||| || | |||| ||| | ||
Sbjct: 168 cgtcgtcgcccccatctctgtggcgacgaggaggagcagcagcaggagggcggacccggc 109
Query: 524 catgcgtcgagacagcgccat 544
|||||| |||||| |||||||
Sbjct: 108 catgcgacgagactgcgccat 88
Score = 38.2 bits (19), Expect = 0.36
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 313 tcttgcagaagcacttgcg 331
|||||||||||||||||||
Sbjct: 325 tcttgcagaagcacttgcg 307
>gb|BU998195.1|BU998195 HI10E15r HI Hordeum vulgare subsp. vulgare cDNA clone HI10E15
5-PRIME, mRNA sequence
Length = 573
Score = 123 bits (62), Expect = 8e-027
Identities = 166/201 (82%), Gaps = 6/201 (2%)
Strand = Plus / Minus
Query: 350 gcactcgccgccggggaagttctcggtctggcacacgttggcgcagttgttgctgctcat 409
||||| |||| |||||||||||||||| |||| ||| |||||||||| ||||||| |
Sbjct: 262 gcactggccgtcggggaagttctcggtgcggcagacggcggcgcagttgctgctgctgag 203
Query: 410 gcacaggcccttgaaccggtggctctgcgacaggcagtgcctcgcctccgccacct---- 465
|||| |||||||||| |||||||||||||||||||| || ||||||||||||||
Sbjct: 202 gcacgtgcccttgaacttgtggctctgcgacaggcagtcccgcgcctccgccaccttcac 143
Query: 466 --tggtcgtccccagctctgtggcgacgaggaggagcaggaggacgaggacgggagccgc 523
| |||| ||||| |||||||||||||||||||||||| || | |||| ||| | ||
Sbjct: 142 cgtcgtcgcccccatctctgtggcgacgaggaggagcagcagcaggagggcggacccggc 83
Query: 524 catgcgtcgagacagcgccat 544
|||||| |||||| |||||||
Sbjct: 82 catgcgacgagactgcgccat 62
Score = 38.2 bits (19), Expect = 0.36
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 313 tcttgcagaagcacttgcg 331
|||||||||||||||||||
Sbjct: 299 tcttgcagaagcacttgcg 281
>gb|CA003405.1|CA003405 HS14F13r HS Hordeum vulgare subsp. vulgare cDNA clone HS14F13
5-PRIME, mRNA sequence
Length = 459
Score = 123 bits (62), Expect = 8e-027
Identities = 166/201 (82%), Gaps = 6/201 (2%)
Strand = Plus / Minus
Query: 350 gcactcgccgccggggaagttctcggtctggcacacgttggcgcagttgttgctgctcat 409
||||| |||| |||||||||||||||| |||| ||| |||||||||| ||||||| |
Sbjct: 290 gcactggccgtcggggaagttctcggtgcggcagacggcggcgcagttgctgctgctgag 231
Query: 410 gcacaggcccttgaaccggtggctctgcgacaggcagtgcctcgcctccgccacct---- 465
|||| |||||||||| |||||||||||||||||||| || ||||||||||||||
Sbjct: 230 gcacgtgcccttgaacttgtggctctgcgacaggcagtcccgcgcctccgccaccttcac 171
Query: 466 --tggtcgtccccagctctgtggcgacgaggaggagcaggaggacgaggacgggagccgc 523
| |||| ||||| |||||||||||||||||||||||| || | |||| ||| | ||
Sbjct: 170 cgtcgtcgcccccatctctgtggcgacgaggaggagcagcagcaggagggcggacccggc 111
Query: 524 catgcgtcgagacagcgccat 544
|||||| |||||| |||||||
Sbjct: 110 catgcgacgagactgcgccat 90
Score = 38.2 bits (19), Expect = 0.36
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 313 tcttgcagaagcacttgcg 331
|||||||||||||||||||
Sbjct: 327 tcttgcagaagcacttgcg 309
>gb|CA005817.1|CA005817 HU08K17u HU Hordeum vulgare subsp. vulgare cDNA clone HU08K17
3-PRIME, mRNA sequence
Length = 561
Score = 123 bits (62), Expect = 8e-027
Identities = 166/201 (82%), Gaps = 6/201 (2%)
Strand = Plus / Plus
Query: 350 gcactcgccgccggggaagttctcggtctggcacacgttggcgcagttgttgctgctcat 409
||||| |||| |||||||||||||||| |||| ||| |||||||||| ||||||| |
Sbjct: 343 gcactggccgtcggggaagttctcggtgcggcagacggcggcgcagttgctgctgctgag 402
Query: 410 gcacaggcccttgaaccggtggctctgcgacaggcagtgcctcgcctccgccacct---- 465
|||| |||||||||| |||||||||||||||||||| || ||||||||||||||
Sbjct: 403 gcacgtgcccttgaacttgtggctctgcgacaggcagtcccgcgcctccgccaccttcac 462
Query: 466 --tggtcgtccccagctctgtggcgacgaggaggagcaggaggacgaggacgggagccgc 523
| |||| ||||| |||||||||||||||||||||||| || | |||| ||| | ||
Sbjct: 463 cgtcgtcgcccccatctctgtggcgacgaggaggagcagcagcaggagggcggacccggc 522
Query: 524 catgcgtcgagacagcgccat 544
|||||| |||||| |||||||
Sbjct: 523 catgcgacgagactgcgccat 543
Score = 38.2 bits (19), Expect = 0.36
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 313 tcttgcagaagcacttgcg 331
|||||||||||||||||||
Sbjct: 306 tcttgcagaagcacttgcg 324
>gb|CA020390.1|CA020390 HZ36C12r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ36C12
5-PRIME, mRNA sequence
Length = 605
Score = 123 bits (62), Expect = 8e-027
Identities = 166/201 (82%), Gaps = 6/201 (2%)
Strand = Plus / Minus
Query: 350 gcactcgccgccggggaagttctcggtctggcacacgttggcgcagttgttgctgctcat 409
||||| |||| |||||||||||||||| |||| ||| |||||||||| ||||||| |
Sbjct: 295 gcactggccgtcggggaagttctcggtgcggcagacggcggcgcagttgctgctgctgag 236
Query: 410 gcacaggcccttgaaccggtggctctgcgacaggcagtgcctcgcctccgccacct---- 465
|||| |||||||||| |||||||||||||||||||| || ||||||||||||||
Sbjct: 235 gcacgtgcccttgaacttgtggctctgcgacaggcagtcccgcgcctccgccaccttcac 176
Query: 466 --tggtcgtccccagctctgtggcgacgaggaggagcaggaggacgaggacgggagccgc 523
| |||| ||||| |||||||||||||||||||||||| || | |||| ||| | ||
Sbjct: 175 cgtcgtcgcccccatctctgtggcgacgaggaggagcagcagcaggagggcggacccggc 116
Query: 524 catgcgtcgagacagcgccat 544
|||||| |||||| |||||||
Sbjct: 115 catgcgacgagactgcgccat 95
Score = 38.2 bits (19), Expect = 0.36
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 313 tcttgcagaagcacttgcg 331
|||||||||||||||||||
Sbjct: 332 tcttgcagaagcacttgcg 314
>gb|CA021107.1|CA021107 HZ39C03r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ39C03
5-PRIME, mRNA sequence
Length = 607
Score = 123 bits (62), Expect = 8e-027
Identities = 166/201 (82%), Gaps = 6/201 (2%)
Strand = Plus / Minus
Query: 350 gcactcgccgccggggaagttctcggtctggcacacgttggcgcagttgttgctgctcat 409
||||| |||| |||||||||||||||| |||| ||| |||||||||| ||||||| |
Sbjct: 296 gcactggccgtcggggaagttctcggtgcggcagacggcggcgcagttgctgctgctgag 237
Query: 410 gcacaggcccttgaaccggtggctctgcgacaggcagtgcctcgcctccgccacct---- 465
|||| |||||||||| |||||||||||||||||||| || ||||||||||||||
Sbjct: 236 gcacgtgcccttgaacttgtggctctgcgacaggcagtcccgcgcctccgccaccttcac 177
Query: 466 --tggtcgtccccagctctgtggcgacgaggaggagcaggaggacgaggacgggagccgc 523
| |||| ||||| |||||||||||||||||||||||| || | |||| ||| | ||
Sbjct: 176 cgtcgtcgcccccatctctgtggcgacgaggaggagcagcagcaggagggcggacccggc 117
Query: 524 catgcgtcgagacagcgccat 544
|||||| |||||| |||||||
Sbjct: 116 catgcgacgagactgcgccat 96
Score = 38.2 bits (19), Expect = 0.36
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 313 tcttgcagaagcacttgcg 331
|||||||||||||||||||
Sbjct: 333 tcttgcagaagcacttgcg 315
>gb|CA021876.1|CA021876 HZ41G17r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ41G17
5-PRIME, mRNA sequence
Length = 437
Score = 123 bits (62), Expect = 8e-027
Identities = 166/201 (82%), Gaps = 6/201 (2%)
Strand = Plus / Minus
Query: 350 gcactcgccgccggggaagttctcggtctggcacacgttggcgcagttgttgctgctcat 409
||||| |||| |||||||||||||||| |||| ||| |||||||||| ||||||| |
Sbjct: 282 gcactggccgtcggggaagttctcggtgcggcagacggcggcgcagttgctgctgctgag 223
Query: 410 gcacaggcccttgaaccggtggctctgcgacaggcagtgcctcgcctccgccacct---- 465
|||| |||||||||| |||||||||||||||||||| || ||||||||||||||
Sbjct: 222 gcacgtgcccttgaacttgtggctctgcgacaggcagtcccgcgcctccgccaccttcac 163
Query: 466 --tggtcgtccccagctctgtggcgacgaggaggagcaggaggacgaggacgggagccgc 523
| |||| ||||| |||||||||||||||||||||||| || | |||| ||| | ||
Sbjct: 162 cgtcgtcgcccccatctctgtggcgacgaggaggagcagcagcaggagggcggacccggc 103
Query: 524 catgcgtcgagacagcgccat 544
|||||| |||||| |||||||
Sbjct: 102 catgcgacgagactgcgccat 82
Score = 38.2 bits (19), Expect = 0.36
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 313 tcttgcagaagcacttgcg 331
|||||||||||||||||||
Sbjct: 319 tcttgcagaagcacttgcg 301
>gb|CA024087.1|CA024087 HZ48F06r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ48F06
5-PRIME, mRNA sequence
Length = 453
Score = 123 bits (62), Expect = 8e-027
Identities = 166/201 (82%), Gaps = 6/201 (2%)
Strand = Plus / Minus
Query: 350 gcactcgccgccggggaagttctcggtctggcacacgttggcgcagttgttgctgctcat 409
||||| |||| |||||||||||||||| |||| ||| |||||||||| ||||||| |
Sbjct: 281 gcactggccgtcggggaagttctcggtgcggcagacggcggcgcagttgctgctgctgag 222
Query: 410 gcacaggcccttgaaccggtggctctgcgacaggcagtgcctcgcctccgccacct---- 465
|||| |||||||||| |||||||||||||||||||| || ||||||||||||||
Sbjct: 221 gcacgtgcccttgaacttgtggctctgcgacaggcagtcccgcgcctccgccaccttcac 162
Query: 466 --tggtcgtccccagctctgtggcgacgaggaggagcaggaggacgaggacgggagccgc 523
| |||| ||||| |||||||||||||||||||||||| || | |||| ||| | ||
Sbjct: 161 cgtcgtcgcccccatctctgtggcgacgaggaggagcagcagcaggagggcggacccggc 102
Query: 524 catgcgtcgagacagcgccat 544
|||||| |||||| |||||||
Sbjct: 101 catgcgacgagactgcgccat 81
Score = 38.2 bits (19), Expect = 0.36
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 313 tcttgcagaagcacttgcg 331
|||||||||||||||||||
Sbjct: 318 tcttgcagaagcacttgcg 300
>gb|CA024227.1|CA024227 HZ48L14r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ48L14
5-PRIME, mRNA sequence
Length = 428
Score = 123 bits (62), Expect = 8e-027
Identities = 166/201 (82%), Gaps = 6/201 (2%)
Strand = Plus / Minus
Query: 350 gcactcgccgccggggaagttctcggtctggcacacgttggcgcagttgttgctgctcat 409
||||| |||| |||||||||||||||| |||| ||| |||||||||| ||||||| |
Sbjct: 281 gcactggccgtcggggaagttctcggtgcggcagacggcggcgcagttgctgctgctgag 222
Query: 410 gcacaggcccttgaaccggtggctctgcgacaggcagtgcctcgcctccgccacct---- 465
|||| |||||||||| |||||||||||||||||||| || ||||||||||||||
Sbjct: 221 gcacgtgcccttgaacttgtggctctgcgacaggcagtcccgcgcctccgccaccttcac 162
Query: 466 --tggtcgtccccagctctgtggcgacgaggaggagcaggaggacgaggacgggagccgc 523
| |||| ||||| |||||||||||||||||||||||| || | |||| ||| | ||
Sbjct: 161 cgtcgtcgcccccatctctgtggcgacgaggaggagcagcagcaggagggcggacccggc 102
Query: 524 catgcgtcgagacagcgccat 544
|||||| |||||| |||||||
Sbjct: 101 catgcgacgagactgcgccat 81
Score = 38.2 bits (19), Expect = 0.36
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 313 tcttgcagaagcacttgcg 331
|||||||||||||||||||
Sbjct: 318 tcttgcagaagcacttgcg 300
>gb|CA024286.1|CA024286 HZ48O03r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ48O03
5-PRIME, mRNA sequence
Length = 526
Score = 123 bits (62), Expect = 8e-027
Identities = 166/201 (82%), Gaps = 6/201 (2%)
Strand = Plus / Minus
Query: 350 gcactcgccgccggggaagttctcggtctggcacacgttggcgcagttgttgctgctcat 409
||||| |||| |||||||||||||||| |||| ||| |||||||||| ||||||| |
Sbjct: 292 gcactggccgtcggggaagttctcggtgcggcagacggcggcgcagttgctgctgctgag 233
Query: 410 gcacaggcccttgaaccggtggctctgcgacaggcagtgcctcgcctccgccacct---- 465
|||| |||||||||| |||||||||||||||||||| || ||||||||||||||
Sbjct: 232 gcacgtgcccttgaacttgtggctctgcgacaggcagtcccgcgcctccgccaccttcac 173
Query: 466 --tggtcgtccccagctctgtggcgacgaggaggagcaggaggacgaggacgggagccgc 523
| |||| ||||| |||||||||||||||||||||||| || | |||| ||| | ||
Sbjct: 172 cgtcgtcgcccccatctctgtggcgacgaggaggagcagcagcaggagggcggacccggc 113
Query: 524 catgcgtcgagacagcgccat 544
|||||| |||||| |||||||
Sbjct: 112 catgcgacgagactgcgccat 92
Score = 38.2 bits (19), Expect = 0.36
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 313 tcttgcagaagcacttgcg 331
|||||||||||||||||||
Sbjct: 329 tcttgcagaagcacttgcg 311
>gb|CA024533.1|CA024533 HZ49J05r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ49J05
5-PRIME, mRNA sequence
Length = 612
Score = 123 bits (62), Expect = 8e-027
Identities = 166/201 (82%), Gaps = 6/201 (2%)
Strand = Plus / Minus
Query: 350 gcactcgccgccggggaagttctcggtctggcacacgttggcgcagttgttgctgctcat 409
||||| |||| |||||||||||||||| |||| ||| |||||||||| ||||||| |
Sbjct: 301 gcactggccgtcggggaagttctcggtgcggcagacggcggcgcagttgctgctgctgag 242
Query: 410 gcacaggcccttgaaccggtggctctgcgacaggcagtgcctcgcctccgccacct---- 465
|||| |||||||||| |||||||||||||||||||| || ||||||||||||||
Sbjct: 241 gcacgtgcccttgaacttgtggctctgcgacaggcagtcccgcgcctccgccaccttcac 182
Query: 466 --tggtcgtccccagctctgtggcgacgaggaggagcaggaggacgaggacgggagccgc 523
| |||| ||||| |||||||||||||||||||||||| || | |||| ||| | ||
Sbjct: 181 cgtcgtcgcccccatctctgtggcgacgaggaggagcagcagcaggagggcggacccggc 122
Query: 524 catgcgtcgagacagcgccat 544
|||||| |||||| |||||||
Sbjct: 121 catgcgacgagactgcgccat 101
Score = 38.2 bits (19), Expect = 0.36
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 313 tcttgcagaagcacttgcg 331
|||||||||||||||||||
Sbjct: 338 tcttgcagaagcacttgcg 320
>gb|CA024986.1|CA024986 HZ50O09r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ50O09
5-PRIME, mRNA sequence
Length = 491
Score = 123 bits (62), Expect = 8e-027
Identities = 166/201 (82%), Gaps = 6/201 (2%)
Strand = Plus / Minus
Query: 350 gcactcgccgccggggaagttctcggtctggcacacgttggcgcagttgttgctgctcat 409
||||| |||| |||||||||||||||| |||| ||| |||||||||| ||||||| |
Sbjct: 291 gcactggccgtcggggaagttctcggtgcggcagacggcggcgcagttgctgctgctgag 232
Query: 410 gcacaggcccttgaaccggtggctctgcgacaggcagtgcctcgcctccgccacct---- 465
|||| |||||||||| |||||||||||||||||||| || ||||||||||||||
Sbjct: 231 gcacgtgcccttgaacttgtggctctgcgacaggcagtcccgcgcctccgccaccttcac 172
Query: 466 --tggtcgtccccagctctgtggcgacgaggaggagcaggaggacgaggacgggagccgc 523
| |||| ||||| |||||||||||||||||||||||| || | |||| ||| | ||
Sbjct: 171 cgtcgtcgcccccatctctgtggcgacgaggaggagcagcagcaggagggcggacccggc 112
Query: 524 catgcgtcgagacagcgccat 544
|||||| |||||| |||||||
Sbjct: 111 catgcgacgagactgcgccat 91
Score = 38.2 bits (19), Expect = 0.36
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 313 tcttgcagaagcacttgcg 331
|||||||||||||||||||
Sbjct: 328 tcttgcagaagcacttgcg 310
>gb|CA025799.1|CA025799 HZ53C22r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ53C22
5-PRIME, mRNA sequence
Length = 503
Score = 123 bits (62), Expect = 8e-027
Identities = 166/201 (82%), Gaps = 6/201 (2%)
Strand = Plus / Minus
Query: 350 gcactcgccgccggggaagttctcggtctggcacacgttggcgcagttgttgctgctcat 409
||||| |||| |||||||||||||||| |||| ||| |||||||||| ||||||| |
Sbjct: 301 gcactggccgtcggggaagttctcggtgcggcagacggcggcgcagttgctgctgctgag 242
Query: 410 gcacaggcccttgaaccggtggctctgcgacaggcagtgcctcgcctccgccacct---- 465
|||| |||||||||| |||||||||||||||||||| || ||||||||||||||
Sbjct: 241 gcacgtgcccttgaacttgtggctctgcgacaggcagtcccgcgcctccgccaccttcac 182
Query: 466 --tggtcgtccccagctctgtggcgacgaggaggagcaggaggacgaggacgggagccgc 523
| |||| ||||| |||||||||||||||||||||||| || | |||| ||| | ||
Sbjct: 181 cgtcgtcgcccccatctctgtggcgacgaggaggagcagcagcaggagggcggacccggc 122
Query: 524 catgcgtcgagacagcgccat 544
|||||| |||||| |||||||
Sbjct: 121 catgcgacgagactgcgccat 101
Score = 38.2 bits (19), Expect = 0.36
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 313 tcttgcagaagcacttgcg 331
|||||||||||||||||||
Sbjct: 338 tcttgcagaagcacttgcg 320
>gb|CA026240.1|CA026240 HZ55F09r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ55F09
5-PRIME, mRNA sequence
Length = 416
Score = 123 bits (62), Expect = 8e-027
Identities = 166/201 (82%), Gaps = 6/201 (2%)
Strand = Plus / Minus
Query: 350 gcactcgccgccggggaagttctcggtctggcacacgttggcgcagttgttgctgctcat 409
||||| |||| |||||||||||||||| |||| ||| |||||||||| ||||||| |
Sbjct: 297 gcactggccgtcggggaagttctcggtgcggcagacggcggcgcagttgctgctgctgag 238
Query: 410 gcacaggcccttgaaccggtggctctgcgacaggcagtgcctcgcctccgccacct---- 465
|||| |||||||||| |||||||||||||||||||| || ||||||||||||||
Sbjct: 237 gcacgtgcccttgaacttgtggctctgcgacaggcagtcccgcgcctccgccaccttcac 178
Query: 466 --tggtcgtccccagctctgtggcgacgaggaggagcaggaggacgaggacgggagccgc 523
| |||| ||||| |||||||||||||||||||||||| || | |||| ||| | ||
Sbjct: 177 cgtcgtcgcccccatctctgtggcgacgaggaggagcagcagcaggagggcggacccggc 118
Query: 524 catgcgtcgagacagcgccat 544
|||||| |||||| |||||||
Sbjct: 117 catgcgacgagactgcgccat 97
Score = 38.2 bits (19), Expect = 0.36
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 313 tcttgcagaagcacttgcg 331
|||||||||||||||||||
Sbjct: 334 tcttgcagaagcacttgcg 316
>gb|CA031942.1|CA031942 HX11J01r HX Hordeum vulgare subsp. vulgare cDNA clone HX11J01
5-PRIME, mRNA sequence
Length = 557
Score = 123 bits (62), Expect = 8e-027
Identities = 166/201 (82%), Gaps = 6/201 (2%)
Strand = Plus / Minus
Query: 350 gcactcgccgccggggaagttctcggtctggcacacgttggcgcagttgttgctgctcat 409
||||| |||| |||||||||||||||| |||| ||| |||||||||| ||||||| |
Sbjct: 263 gcactggccgtcggggaagttctcggtgcggcagacggcggcgcagttgctgctgctgag 204
Query: 410 gcacaggcccttgaaccggtggctctgcgacaggcagtgcctcgcctccgccacct---- 465
|||| |||||||||| |||||||||||||||||||| || ||||||||||||||
Sbjct: 203 gcacgtgcccttgaacttgtggctctgcgacaggcagtcccgcgcctccgccaccttcac 144
Query: 466 --tggtcgtccccagctctgtggcgacgaggaggagcaggaggacgaggacgggagccgc 523
| |||| ||||| |||||||||||||||||||||||| || | |||| ||| | ||
Sbjct: 143 cgtcgtcgcccccatctctgtggcgacgaggaggagcagcagcaggagggcggacccggc 84
Query: 524 catgcgtcgagacagcgccat 544
|||||| |||||| |||||||
Sbjct: 83 catgcgacgagactgcgccat 63
Score = 38.2 bits (19), Expect = 0.36
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 313 tcttgcagaagcacttgcg 331
|||||||||||||||||||
Sbjct: 300 tcttgcagaagcacttgcg 282
>gb|CA032116.1|CA032116 HX12B02r HX Hordeum vulgare subsp. vulgare cDNA clone HX12B02
5-PRIME, mRNA sequence
Length = 573
Score = 123 bits (62), Expect = 8e-027
Identities = 166/201 (82%), Gaps = 6/201 (2%)
Strand = Plus / Minus
Query: 350 gcactcgccgccggggaagttctcggtctggcacacgttggcgcagttgttgctgctcat 409
||||| |||| |||||||||||||||| |||| ||| |||||||||| ||||||| |
Sbjct: 262 gcactggccgtcggggaagttctcggtgcggcagacggcggcgcagttgctgctgctgag 203
Query: 410 gcacaggcccttgaaccggtggctctgcgacaggcagtgcctcgcctccgccacct---- 465
|||| |||||||||| |||||||||||||||||||| || ||||||||||||||
Sbjct: 202 gcacgtgcccttgaacttgtggctctgcgacaggcagtcccgcgcctccgccaccttcac 143
Query: 466 --tggtcgtccccagctctgtggcgacgaggaggagcaggaggacgaggacgggagccgc 523
| |||| ||||| |||||||||||||||||||||||| || | |||| ||| | ||
Sbjct: 142 cgtcgtcgcccccatctctgtggcgacgaggaggagcagcagcaggagggcggacccggc 83
Query: 524 catgcgtcgagacagcgccat 544
|||||| |||||| |||||||
Sbjct: 82 catgcgacgagactgcgccat 62
Score = 38.2 bits (19), Expect = 0.36
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 313 tcttgcagaagcacttgcg 331
|||||||||||||||||||
Sbjct: 299 tcttgcagaagcacttgcg 281
>gb|CA032223.1|CA032223 HX12G08r HX Hordeum vulgare subsp. vulgare cDNA clone HX12G08
5-PRIME, mRNA sequence
Length = 590
Score = 123 bits (62), Expect = 8e-027
Identities = 166/201 (82%), Gaps = 6/201 (2%)
Strand = Plus / Minus
Query: 350 gcactcgccgccggggaagttctcggtctggcacacgttggcgcagttgttgctgctcat 409
||||| |||| |||||||||||||||| |||| ||| |||||||||| ||||||| |
Sbjct: 296 gcactggccgtcggggaagttctcggtgcggcagacggcggcgcagttgctgctgctgag 237
Query: 410 gcacaggcccttgaaccggtggctctgcgacaggcagtgcctcgcctccgccacct---- 465
|||| |||||||||| |||||||||||||||||||| || ||||||||||||||
Sbjct: 236 gcacgtgcccttgaacttgtggctctgcgacaggcagtcccgcgcctccgccaccttcac 177
Query: 466 --tggtcgtccccagctctgtggcgacgaggaggagcaggaggacgaggacgggagccgc 523
| |||| ||||| |||||||||||||||||||||||| || | |||| ||| | ||
Sbjct: 176 cgtcgtcgcccccatctctgtggcgacgaggaggagcagcagcaggagggcggacccggc 117
Query: 524 catgcgtcgagacagcgccat 544
|||||| |||||| |||||||
Sbjct: 116 catgcgacgagactgcgccat 96
Score = 38.2 bits (19), Expect = 0.36
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 313 tcttgcagaagcacttgcg 331
|||||||||||||||||||
Sbjct: 333 tcttgcagaagcacttgcg 315
>gb|CB859380.1|CB859380 HI10E15w HI Hordeum vulgare subsp. vulgare cDNA clone HI10E15
3-PRIME, mRNA sequence
Length = 531
Score = 123 bits (62), Expect = 8e-027
Identities = 166/201 (82%), Gaps = 6/201 (2%)
Strand = Plus / Plus
Query: 350 gcactcgccgccggggaagttctcggtctggcacacgttggcgcagttgttgctgctcat 409
||||| |||| |||||||||||||||| |||| ||| |||||||||| ||||||| |
Sbjct: 312 gcactggccgtcggggaagttctcggtgcggcagacggcggcgcagttgctgctgctgag 371
Query: 410 gcacaggcccttgaaccggtggctctgcgacaggcagtgcctcgcctccgccacct---- 465
|||| |||||||||| |||||||||||||||||||| || ||||||||||||||
Sbjct: 372 gcacgtgcccttgaacttgtggctctgcgacaggcagtcccgcgcctccgccaccttcac 431
Query: 466 --tggtcgtccccagctctgtggcgacgaggaggagcaggaggacgaggacgggagccgc 523
| |||| ||||| |||||||||||||||||||||||| || | |||| ||| | ||
Sbjct: 432 cgtcgtcgcccccatctctgtggcgacgaggaggagcagcagcaggagggcggacccggc 491
Query: 524 catgcgtcgagacagcgccat 544
|||||| |||||| |||||||
Sbjct: 492 catgcgacgagactgcgccat 512
Score = 38.2 bits (19), Expect = 0.36
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 313 tcttgcagaagcacttgcg 331
|||||||||||||||||||
Sbjct: 275 tcttgcagaagcacttgcg 293
>gb|CB876023.1|CB876023 HX10A22w HX Hordeum vulgare subsp. vulgare cDNA clone HX10A22
3-PRIME, mRNA sequence
Length = 594
Score = 123 bits (62), Expect = 8e-027
Identities = 166/201 (82%), Gaps = 6/201 (2%)
Strand = Plus / Plus
Query: 350 gcactcgccgccggggaagttctcggtctggcacacgttggcgcagttgttgctgctcat 409
||||| |||| |||||||||||||||| |||| ||| |||||||||| ||||||| |
Sbjct: 312 gcactggccgtcggggaagttctcggtgcggcagacggcggcgcagttgctgctgctgag 371
Query: 410 gcacaggcccttgaaccggtggctctgcgacaggcagtgcctcgcctccgccacct---- 465
|||| |||||||||| |||||||||||||||||||| || ||||||||||||||
Sbjct: 372 gcacgtgcccttgaacttgtggctctgcgacaggcagtcccgcgcctccgccaccttcac 431
Query: 466 --tggtcgtccccagctctgtggcgacgaggaggagcaggaggacgaggacgggagccgc 523
| |||| ||||| |||||||||||||||||||||||| || | |||| ||| | ||
Sbjct: 432 cgtcgtcgcccccatctctgtggcgacgaggaggagcagcagcaggagggcggacccggc 491
Query: 524 catgcgtcgagacagcgccat 544
|||||| |||||| |||||||
Sbjct: 492 catgcgacgagactgcgccat 512
Score = 38.2 bits (19), Expect = 0.36
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 313 tcttgcagaagcacttgcg 331
|||||||||||||||||||
Sbjct: 275 tcttgcagaagcacttgcg 293
>gb|CB876529.1|CB876529 HX11J01w HX Hordeum vulgare subsp. vulgare cDNA clone HX11J01
3-PRIME, mRNA sequence
Length = 562
Score = 123 bits (62), Expect = 8e-027
Identities = 166/201 (82%), Gaps = 6/201 (2%)
Strand = Plus / Plus
Query: 350 gcactcgccgccggggaagttctcggtctggcacacgttggcgcagttgttgctgctcat 409
||||| |||| |||||||||||||||| |||| ||| |||||||||| ||||||| |
Sbjct: 295 gcactggccgtcggggaagttctcggtgcggcagacggcggcgcagttgctgctgctgag 354
Query: 410 gcacaggcccttgaaccggtggctctgcgacaggcagtgcctcgcctccgccacct---- 465
|||| |||||||||| |||||||||||||||||||| || ||||||||||||||
Sbjct: 355 gcacgtgcccttgaacttgtggctctgcgacaggcagtcccgcgcctccgccaccttcac 414
Query: 466 --tggtcgtccccagctctgtggcgacgaggaggagcaggaggacgaggacgggagccgc 523
| |||| ||||| |||||||||||||||||||||||| || | |||| ||| | ||
Sbjct: 415 cgtcgtcgcccccatctctgtggcgacgaggaggagcagcagcaggagggcggacccggc 474
Query: 524 catgcgtcgagacagcgccat 544
|||||| |||||| |||||||
Sbjct: 475 catgcgacgagactgcgccat 495
Score = 38.2 bits (19), Expect = 0.36
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 313 tcttgcagaagcacttgcg 331
|||||||||||||||||||
Sbjct: 258 tcttgcagaagcacttgcg 276
>gb|AL510956.1|AL510956 AL510956 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY06I14u 3',
mRNA sequence
Length = 515
Score = 117 bits (59), Expect = 5e-025
Identities = 165/201 (82%), Gaps = 6/201 (2%)
Strand = Plus / Minus
Query: 350 gcactcgccgccggggaagttctcggtctggcacacgttggcgcagttgttgctgctcat 409
||||| |||| |||||||||||||||| |||| ||| |||||||||| ||||||| |
Sbjct: 270 gcactggccgtcggggaagttctcggtgcggcagacggcggcgcagttgctgctgctgag 211
Query: 410 gcacaggcccttgaaccggtggctctgcgacaggcagtgcctcgcctccgccacct---- 465
|||| |||||||||| |||||||||||||||||||| || |||||||||||| |
Sbjct: 210 gcacgtgcccttgaacttgtggctctgcgacaggcagtcccgcgcctccgccacnttcac 151
Query: 466 --tggtcgtccccagctctgtggcgacgaggaggagcaggaggacgaggacgggagccgc 523
| |||| ||||| |||||||||||||||||||||||| || | |||| ||| | ||
Sbjct: 150 agtcgtcgcccccatctctgtggcgacgaggaggagcagcagcaggagggcggacccggc 91
Query: 524 catgcgtcgagacagcgccat 544
|||||| |||||| |||||||
Sbjct: 90 catgcgacgagactgcgccat 70
Score = 38.2 bits (19), Expect = 0.36
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 313 tcttgcagaagcacttgcg 331
|||||||||||||||||||
Sbjct: 307 tcttgcagaagcacttgcg 289
>gb|BI957750.1|BI957750 HVSMEn0011A06f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0011A06f, mRNA sequence
Length = 861
Score = 117 bits (59), Expect = 5e-025
Identities = 165/201 (82%), Gaps = 6/201 (2%)
Strand = Plus / Minus
Query: 350 gcactcgccgccggggaagttctcggtctggcacacgttggcgcagttgttgctgctcat 409
||||| |||| |||||||||||||||| |||| ||| |||||||||| ||||||| |
Sbjct: 285 gcactggccgtcggggaagttctcggtgcggcagacggcggcgcagttgctgctgctgag 226
Query: 410 gcacaggcccttgaaccggtggctctgcgacaggcagtgcctcgcctccgcca------c 463
|||| |||||||||| |||||||||||||||||||| || ||||||||||| |
Sbjct: 225 gcacgtgcccttgaacttgtggctctgcgacaggcagtcccgcgcctccgccaccccccc 166
Query: 464 cttggtcgtccccagctctgtggcgacgaggaggagcaggaggacgaggacgggagccgc 523
| | |||| ||||| |||||||||||||||||||||||| || | |||| ||| | ||
Sbjct: 165 cgtngtcgcccccatctctgtggcgacgaggaggagcagcagcaggagggcggacccggc 106
Query: 524 catgcgtcgagacagcgccat 544
|||||| |||||| |||||||
Sbjct: 105 catgcgacgagactgcgccat 85
Score = 38.2 bits (19), Expect = 0.36
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 313 tcttgcagaagcacttgcg 331
|||||||||||||||||||
Sbjct: 322 tcttgcagaagcacttgcg 304
>gb|BM100389.2|BM100389 EBma01_SQ005_B05_R maternal, 4 DPA, no treatment, cv Optic, EBma01
Hordeum vulgare subsp. vulgare cDNA clone
EBma01_SQ005_B05 5', mRNA sequence
Length = 521
Score = 117 bits (59), Expect = 5e-025
Identities = 142/169 (84%), Gaps = 3/169 (1%)
Strand = Plus / Minus
Query: 348 ttgcactcgccgccggggaagttctcggtctggcacacgttggcgcagttgttgctgctc 407
|||||||||||| |||||||||||||||| |||||||| |||||||||| || ||||
Sbjct: 231 ttgcactcgccgtcggggaagttctcggtgcggcacacgccggcgcagttgctgttgctg 172
Query: 408 atgcacaggcccttgaaccggtggctctgcgacaggcagtgcctcgcctccgccaccttg 467
| ||| |||||||||| |||||||||||||||||| || ||||||||| ||||
Sbjct: 171 aggcaggtgcccttgaacttgtggctctgcgacaggcacgtccgggcctccgccgccttc 112
Query: 468 gtcgtccccagctctgtggcgacgag---gaggagcaggaggacgagga 513
||||||||| ||||||||||||||| |||||||||||||| |||||
Sbjct: 111 atcgtccccatctctgtggcgacgagcacgaggagcaggaggaggagga 63
>gb|BQ757010.1|BQ757010 EBem10_SQ002_I03_R embryo, 2 Day germination, no treatment, cv
Optic, EBem10 Hordeum vulgare subsp. vulgare cDNA clone
EBem10_SQ002_I03 5', mRNA sequence
Length = 293
Score = 117 bits (59), Expect = 5e-025
Identities = 142/169 (84%), Gaps = 3/169 (1%)
Strand = Plus / Minus
Query: 348 ttgcactcgccgccggggaagttctcggtctggcacacgttggcgcagttgttgctgctc 407
|||||||||||| |||||||||||||||| |||||||| |||||||||| || ||||
Sbjct: 243 ttgcactcgccgtcggggaagttctcggtgcggcacacgccggcgcagttgctgttgctg 184
Query: 408 atgcacaggcccttgaaccggtggctctgcgacaggcagtgcctcgcctccgccaccttg 467
| ||| |||||||||| |||||||||||||||||| || ||||||||| ||||
Sbjct: 183 aggcaggtgcccttgaacttgtggctctgcgacaggcacgtccgggcctccgccgccttc 124
Query: 468 gtcgtccccagctctgtggcgacgag---gaggagcaggaggacgagga 513
||||||||| ||||||||||||||| |||||||||||||| |||||
Sbjct: 123 atcgtccccatctctgtggcgacgagcacgaggagcaggaggaggagga 75
>gb|BQ767032.1|BQ767032 EBro08_SQ007_G20_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ007_G20 5', mRNA sequence
Length = 644
Score = 117 bits (59), Expect = 5e-025
Identities = 142/169 (84%), Gaps = 3/169 (1%)
Strand = Plus / Minus
Query: 348 ttgcactcgccgccggggaagttctcggtctggcacacgttggcgcagttgttgctgctc 407
|||||||||||| |||||||||||||||| |||||||| |||||||||| || ||||
Sbjct: 255 ttgcactcgccgtcggggaagttctcggtgcggcacacgccggcgcagttgctgttgctg 196
Query: 408 atgcacaggcccttgaaccggtggctctgcgacaggcagtgcctcgcctccgccaccttg 467
| ||| |||||||||| |||||||||||||||||| || ||||||||| ||||
Sbjct: 195 aggcaggtgcccttgaacttgtggctctgcgacaggcacgtccgggcctccgccgccttc 136
Query: 468 gtcgtccccagctctgtggcgacgag---gaggagcaggaggacgagga 513
||||||||| ||||||||||||||| |||||||||||||| |||||
Sbjct: 135 atcgtccccatctctgtggcgacgagcacgaggagcaggaggaggagga 87
>gb|BG342887.2|BG342887 HVSMEg0001C01f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0001C01f, mRNA sequence
Length = 844
Score = 115 bits (58), Expect = 2e-024
Identities = 165/201 (82%), Gaps = 6/201 (2%)
Strand = Plus / Minus
Query: 350 gcactcgccgccggggaagttctcggtctggcacacgttggcgcagttgttgctgctcat 409
||||| |||| |||||||||||||||| |||| ||| |||||||||| ||||||| |
Sbjct: 280 gcactggccgtcggggaagttctcggtgcggcagacggcggcgcagttgctgctgctgag 221
Query: 410 gcacaggcccttgaaccggtggctctgcgacaggcagtgcctcgcctccgccacct---- 465
|||| |||||||||| |||||||||||||||||||| || |||||||||||| |
Sbjct: 220 gcacgtgcccttgaacttgtggctctgcgacaggcagtcccgcgcctccgccacgttcac 161
Query: 466 --tggtcgtccccagctctgtggcgacgaggaggagcaggaggacgaggacgggagccgc 523
| |||| ||||| |||||||||||||||||||||||| || | |||| ||| | ||
Sbjct: 160 tgtcgtcgcccccatctctgtggcgacgaggaggagcagcagcaggagggcggacccggc 101
Query: 524 catgcgtcgagacagcgccat 544
|||||| |||||| |||||||
Sbjct: 100 catgcgacgagactgcgccat 80
Score = 38.2 bits (19), Expect = 0.36
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 313 tcttgcagaagcacttgcg 331
|||||||||||||||||||
Sbjct: 317 tcttgcagaagcacttgcg 299
>gb|AJ436584.1|AJ436584 AJ436584 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200070G08F1, mRNA sequence
Length = 618
Score = 115 bits (58), Expect = 2e-024
Identities = 165/201 (82%), Gaps = 6/201 (2%)
Strand = Plus / Minus
Query: 350 gcactcgccgccggggaagttctcggtctggcacacgttggcgcagttgttgctgctcat 409
||||| |||| |||||||||||||||| |||| ||| |||||||||| ||||||| |
Sbjct: 285 gcactggccgtcggggaagttctcggtgcggcagacggcggcgcagttgctgctgctgag 226
Query: 410 gcacaggcccttgaaccggtggctctgcgacaggcagtgcctcgcctccgccacct---- 465
|||| |||||||||| |||||||||||||||||||| || ||||||||||||||
Sbjct: 225 gcacgtgcccttgaacttgtggctctgcgacaggcagtcccgcgcctccgccaccttcac 166
Query: 466 --tggtcgtccccagctctgtggcgacgaggaggagcaggaggacgaggacgggagccgc 523
| |||| ||||| |||||||||||||||||||| ||| || | ||| ||| || ||
Sbjct: 165 cgtcgtcgcccccatctctgtggcgacgaggaggaccagcagcagaagggcggacgcggc 106
Query: 524 catgcgtcgagacagcgccat 544
|||||| |||||| |||||||
Sbjct: 105 catgcgacgagactgcgccat 85
Score = 38.2 bits (19), Expect = 0.36
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 313 tcttgcagaagcacttgcg 331
|||||||||||||||||||
Sbjct: 322 tcttgcagaagcacttgcg 304
>gb|BM100577.2|BM100577 EBma01_SQ005_K04_R maternal, 4 DPA, no treatment, cv Optic, EBma01
Hordeum vulgare subsp. vulgare cDNA clone
EBma01_SQ005_K04 5', mRNA sequence
Length = 503
Score = 115 bits (58), Expect = 2e-024
Identities = 165/201 (82%), Gaps = 6/201 (2%)
Strand = Plus / Minus
Query: 350 gcactcgccgccggggaagttctcggtctggcacacgttggcgcagttgttgctgctcat 409
||||| |||| |||||||||||||||| |||| ||| |||||||||| ||||||| |
Sbjct: 299 gcactggccgtcggggaagttctcggtgcggcagacggcggcgcagttgctgctgctgag 240
Query: 410 gcacaggcccttgaaccggtggctctgcgacaggcagtgcctcgcctccgccacct---- 465
|||| |||||||||| |||||||||||||||||||| || ||||||||||||||
Sbjct: 239 gcacgtgcccttgaacttgtggctctgcgacaggcagtcccgcgcctccgccaccttcac 180
Query: 466 --tggtcgtccccagctctgtggcgacgaggaggagcaggaggacgaggacgggagccgc 523
| |||| ||||| |||||||||||||||||||| ||| || | ||| ||| || ||
Sbjct: 179 cgtcgtcgcccccatctctgtggcgacgaggaggaccagcagcagaagggcggacgcggc 120
Query: 524 catgcgtcgagacagcgccat 544
|||||| |||||| |||||||
Sbjct: 119 catgcgacgagactgcgccat 99
Score = 38.2 bits (19), Expect = 0.36
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 313 tcttgcagaagcacttgcg 331
|||||||||||||||||||
Sbjct: 336 tcttgcagaagcacttgcg 318
>gb|BM373018.2|BM373018 EBma04_SQ002_M04_R maternal, 10 DPA, no treatment, cv Optic, EBma04
Hordeum vulgare subsp. vulgare cDNA clone
EBma04_SQ002_M04 5', mRNA sequence
Length = 592
Score = 115 bits (58), Expect = 2e-024
Identities = 165/201 (82%), Gaps = 6/201 (2%)
Strand = Plus / Minus
Query: 350 gcactcgccgccggggaagttctcggtctggcacacgttggcgcagttgttgctgctcat 409
||||| |||| |||||||||||||||| |||| ||| |||||||||| ||||||| |
Sbjct: 281 gcactggccgtcggggaagttctcggtgcggcagacggcggcgcagttgctgctgctgag 222
Query: 410 gcacaggcccttgaaccggtggctctgcgacaggcagtgcctcgcctccgccacct---- 465
|||| |||||||||| |||||||||||||||||||| || ||||||||||||||
Sbjct: 221 gcacgtgcccttgaacttgtggctctgcgacaggcagtcccgcgcctccgccaccttcac 162
Query: 466 --tggtcgtccccagctctgtggcgacgaggaggagcaggaggacgaggacgggagccgc 523
| |||| ||||| |||||||||||||||||||| ||| || | ||| ||| || ||
Sbjct: 161 cgtcgtcgcccccatctctgtggcgacgaggaggaccagcagcagaagggcggacgcggc 102
Query: 524 catgcgtcgagacagcgccat 544
|||||| |||||| |||||||
Sbjct: 101 catgcgacgagactgcgccat 81
Score = 38.2 bits (19), Expect = 0.36
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 313 tcttgcagaagcacttgcg 331
|||||||||||||||||||
Sbjct: 318 tcttgcagaagcacttgcg 300
>gb|BM100853.2|BM100853 EBpi01_SQ002_D01_R pistil, 1 DPA, no treatment, cv Optic, EBpi01
Hordeum vulgare subsp. vulgare cDNA clone
EBpi01_SQ002_D01 5', mRNA sequence
Length = 514
Score = 115 bits (58), Expect = 2e-024
Identities = 165/201 (82%), Gaps = 6/201 (2%)
Strand = Plus / Minus
Query: 350 gcactcgccgccggggaagttctcggtctggcacacgttggcgcagttgttgctgctcat 409
||||| |||| |||||||||||||||| |||| ||| |||||||||| ||||||| |
Sbjct: 293 gcactggccgtcggggaagttctcggtgcggcagacggcggcgcagttgctgctgctgag 234
Query: 410 gcacaggcccttgaaccggtggctctgcgacaggcagtgcctcgcctccgccacct---- 465
|||| |||||||||| |||||||||||||||||||| || ||||||||||||||
Sbjct: 233 gcacgtgcccttgaacttgtggctctgcgacaggcagtcccgcgcctccgccaccttcac 174
Query: 466 --tggtcgtccccagctctgtggcgacgaggaggagcaggaggacgaggacgggagccgc 523
| |||| ||||| |||||||||||||||||||| ||| || | ||| ||| || ||
Sbjct: 173 cgtcgtcgcccccatctctgtggcgacgaggaggaccagcagcagaagggcggacgcggc 114
Query: 524 catgcgtcgagacagcgccat 544
|||||| |||||| |||||||
Sbjct: 113 catgcgacgagactgcgccat 93
Score = 38.2 bits (19), Expect = 0.36
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 313 tcttgcagaagcacttgcg 331
|||||||||||||||||||
Sbjct: 330 tcttgcagaagcacttgcg 312
>gb|BM100865.2|BM100865 EBpi01_SQ002_D15_R pistil, 1 DPA, no treatment, cv Optic, EBpi01
Hordeum vulgare subsp. vulgare cDNA clone
EBpi01_SQ002_D15 5', mRNA sequence
Length = 510
Score = 115 bits (58), Expect = 2e-024
Identities = 165/201 (82%), Gaps = 6/201 (2%)
Strand = Plus / Minus
Query: 350 gcactcgccgccggggaagttctcggtctggcacacgttggcgcagttgttgctgctcat 409
||||| |||| |||||||||||||||| |||| ||| |||||||||| ||||||| |
Sbjct: 275 gcactggccgtcggggaagttctcggtgcggcagacggcggcgcagttgctgctgctgag 216
Query: 410 gcacaggcccttgaaccggtggctctgcgacaggcagtgcctcgcctccgccacct---- 465
|||| |||||||||| |||||||||||||||||||| || ||||||||||||||
Sbjct: 215 gcacgtgcccttgaacttgtggctctgcgacaggcagtcccgcgcctccgccaccttcac 156
Query: 466 --tggtcgtccccagctctgtggcgacgaggaggagcaggaggacgaggacgggagccgc 523
| |||| ||||| |||||||||||||||||||| ||| || | ||| ||| || ||
Sbjct: 155 cgtcgtcgcccccatctctgtggcgacgaggaggaccagcagcagaagggcggacgcggc 96
Query: 524 catgcgtcgagacagcgccat 544
|||||| |||||| |||||||
Sbjct: 95 catgcgacgagactgcgccat 75
Score = 38.2 bits (19), Expect = 0.36
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 313 tcttgcagaagcacttgcg 331
|||||||||||||||||||
Sbjct: 312 tcttgcagaagcacttgcg 294
>gb|BM101328.2|BM101328 EBpi01_SQ003_I17_R pistil, 1 DPA, no treatment, cv Optic, EBpi01
Hordeum vulgare subsp. vulgare cDNA clone
EBpi01_SQ003_I17 5', mRNA sequence
Length = 480
Score = 115 bits (58), Expect = 2e-024
Identities = 165/201 (82%), Gaps = 6/201 (2%)
Strand = Plus / Minus
Query: 350 gcactcgccgccggggaagttctcggtctggcacacgttggcgcagttgttgctgctcat 409
||||| |||| |||||||||||||||| |||| ||| |||||||||| ||||||| |
Sbjct: 274 gcactggccgtcggggaagttctcggtgcggcagacggcggcgcagttgctgctgctgag 215
Query: 410 gcacaggcccttgaaccggtggctctgcgacaggcagtgcctcgcctccgccacct---- 465
|||| |||||||||| |||||||||||||||||||| || ||||||||||||||
Sbjct: 214 gcacgtgcccttgaacttgtggctctgcgacaggcagtcccgcgcctccgccaccttcac 155
Query: 466 --tggtcgtccccagctctgtggcgacgaggaggagcaggaggacgaggacgggagccgc 523
| |||| ||||| |||||||||||||||||||| ||| || | ||| ||| || ||
Sbjct: 154 cgtcgtcgcccccatctctgtggcgacgaggaggaccagcagcagaagggcggacgcggc 95
Query: 524 catgcgtcgagacagcgccat 544
|||||| |||||| |||||||
Sbjct: 94 catgcgacgagactgcgccat 74
Score = 38.2 bits (19), Expect = 0.36
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 313 tcttgcagaagcacttgcg 331
|||||||||||||||||||
Sbjct: 311 tcttgcagaagcacttgcg 293
>gb|BQ761886.1|BQ761886 EBpi01_SQ005_M05_R pistil, 1 DPA, no treatment, cv Optic, EBpi01
Hordeum vulgare subsp. vulgare cDNA clone
EBpi01_SQ005_M05 5', mRNA sequence
Length = 487
Score = 115 bits (58), Expect = 2e-024
Identities = 165/201 (82%), Gaps = 6/201 (2%)
Strand = Plus / Minus
Query: 350 gcactcgccgccggggaagttctcggtctggcacacgttggcgcagttgttgctgctcat 409
||||| |||| |||||||||||||||| |||| ||| |||||||||| ||||||| |
Sbjct: 253 gcactggccgtcggggaagttctcggtgcggcagacggcggcgcagttgctgctgctgag 194
Query: 410 gcacaggcccttgaaccggtggctctgcgacaggcagtgcctcgcctccgccacct---- 465
|||| |||||||||| |||||||||||||||||||| || ||||||||||||||
Sbjct: 193 gcacgtgcccttgaacttgtggctctgcgacaggcagtcccgcgcctccgccaccttcac 134
Query: 466 --tggtcgtccccagctctgtggcgacgaggaggagcaggaggacgaggacgggagccgc 523
| |||| ||||| |||||||||||||||||||| ||| || | ||| ||| || ||
Sbjct: 133 cgtcgtcgcccccatctctgtggcgacgaggaggaccagcagcagaagggcggacgcggc 74
Query: 524 catgcgtcgagacagcgccat 544
|||||| |||||| |||||||
Sbjct: 73 catgcgacgagactgcgccat 53
Score = 38.2 bits (19), Expect = 0.36
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 313 tcttgcagaagcacttgcg 331
|||||||||||||||||||
Sbjct: 290 tcttgcagaagcacttgcg 272
>gb|BQ764803.1|BQ764803 EBca01_SQ004_O22_R carpel, pre-anthesis, no treatment, cv Optic,
EBca01 Hordeum vulgare subsp. vulgare cDNA clone
EBca01_SQ004_O22 5', mRNA sequence
Length = 501
Score = 115 bits (58), Expect = 2e-024
Identities = 165/201 (82%), Gaps = 6/201 (2%)
Strand = Plus / Minus
Query: 350 gcactcgccgccggggaagttctcggtctggcacacgttggcgcagttgttgctgctcat 409
||||| |||| |||||||||||||||| |||| ||| |||||||||| ||||||| |
Sbjct: 281 gcactggccgtcggggaagttctcggtgcggcagacggcggcgcagttgctgctgctgag 222
Query: 410 gcacaggcccttgaaccggtggctctgcgacaggcagtgcctcgcctccgccacct---- 465
|||| |||||||||| |||||||||||||||||||| || ||||||||||||||
Sbjct: 221 gcacgtgcccttgaacttgtggctctgcgacaggcagtcccgcgcctccgccaccttcac 162
Query: 466 --tggtcgtccccagctctgtggcgacgaggaggagcaggaggacgaggacgggagccgc 523
| |||| ||||| |||||||||||||||||||| ||| || | ||| ||| || ||
Sbjct: 161 cgtcgtcgcccccatctctgtggcgacgaggaggaccagcagcagaagggcggacgcggc 102
Query: 524 catgcgtcgagacagcgccat 544
|||||| |||||| |||||||
Sbjct: 101 catgcgacgagactgcgccat 81
Score = 38.2 bits (19), Expect = 0.36
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 313 tcttgcagaagcacttgcg 331
|||||||||||||||||||
Sbjct: 318 tcttgcagaagcacttgcg 300
>gb|BQ765283.1|BQ765283 EBro03_SQ006_A20_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ006_A20 5', mRNA sequence
Length = 594
Score = 115 bits (58), Expect = 2e-024
Identities = 165/201 (82%), Gaps = 6/201 (2%)
Strand = Plus / Minus
Query: 350 gcactcgccgccggggaagttctcggtctggcacacgttggcgcagttgttgctgctcat 409
||||| |||| |||||||||||||||| |||| ||| |||||||||| ||||||| |
Sbjct: 285 gcactggccgtcggggaagttctcggtgcggcagacggcggcgcagttgctgctgctgag 226
Query: 410 gcacaggcccttgaaccggtggctctgcgacaggcagtgcctcgcctccgccacct---- 465
|||| |||||||||| |||||||||||||||||||| || ||||||||||||||
Sbjct: 225 gcacgtgcccttgaacttgtggctctgcgacaggcagtcccgcgcctccgccaccttcac 166
Query: 466 --tggtcgtccccagctctgtggcgacgaggaggagcaggaggacgaggacgggagccgc 523
| |||| ||||| |||||||||||||||||||| ||| || | ||| ||| || ||
Sbjct: 165 cgtcgtcgcccccatctctgtggcgacgaggaggaccagcagcagaagggcggacgcggc 106
Query: 524 catgcgtcgagacagcgccat 544
|||||| |||||| |||||||
Sbjct: 105 catgcgacgagactgcgccat 85
Score = 38.2 bits (19), Expect = 0.36
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 313 tcttgcagaagcacttgcg 331
|||||||||||||||||||
Sbjct: 322 tcttgcagaagcacttgcg 304
>gb|AL512123.1|AL512123 AL512123 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY10H11u 3',
mRNA sequence
Length = 306
Score = 109 bits (55), Expect = 1e-022
Identities = 163/200 (81%), Gaps = 6/200 (3%)
Strand = Plus / Minus
Query: 351 cactcgccgccggggaagttctcggtctggcacacgttggcgcagttgttgctgctcatg 410
|||| |||| |||||||||||||||| |||| ||| |||||||||| ||||||| | |
Sbjct: 276 cactggccgtcggggaagttctcggtgcggcagacggcggcgcagttgctgctgctgagg 217
Query: 411 cacaggcccttgaaccggtggctctgcgacaggcagtgcctcgcctccgccaccttg--- 467
||| |||||||||| |||||| ||||||||||||| || |||||||||||| ||
Sbjct: 216 cacgtgcccttgaacttgtggctatgcgacaggcagtcccgcgcctccgccacnttnaca 157
Query: 468 ---gtcgtccccagctctgtggcgacgaggaggagcaggaggacgaggacgggagccgcc 524
|||| ||||| |||||||||||||||||||||||| || | |||| ||| | |||
Sbjct: 156 gtcgtcgcccccatctctgtggcgacgaggaggagcagcagcaggagggcggacccggcc 97
Query: 525 atgcgtcgagacagcgccat 544
||||| |||||| |||||||
Sbjct: 96 atgcgacgagactgcgccat 77
>gb|BF629069.2|BF629069 HVSMEb0009M06f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0009M06f, mRNA sequence
Length = 821
Score = 109 bits (55), Expect = 1e-022
Identities = 141/169 (83%), Gaps = 3/169 (1%)
Strand = Plus / Minus
Query: 348 ttgcactcgccgccggggaagttctcggtctggcacacgttggcgcagttgttgctgctc 407
|||||||||||| |||||||||||||||| |||||||| |||||||||| || ||||
Sbjct: 256 ttgcactcgccgtcggggaagttctcggtgcggcacacgccggcgcagttgctgttgctg 197
Query: 408 atgcacaggcccttgaaccggtggctctgcgacaggcagtgcctcgcctccgccaccttg 467
| ||| |||||||||| |||||||||||||||||| || ||||||||| ||||
Sbjct: 196 aggcaggtgcccttgaacttgtggctctgcgacaggcacgtccgggcctccgccgccttc 137
Query: 468 gtcgtccccagctctgtggcgacgag---gaggagcaggaggacgagga 513
||||||||| ||||||||||||||| ||||||||| |||| |||||
Sbjct: 136 atcgtccccatctctgtggcgacgagcacgaggagcagcaggaggagga 88
>gb|BE231073.2|BE231073 HVSMEg0016F11f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0016F11f, mRNA sequence
Length = 891
Score = 109 bits (55), Expect = 1e-022
Identities = 141/169 (83%), Gaps = 3/169 (1%)
Strand = Plus / Minus
Query: 348 ttgcactcgccgccggggaagttctcggtctggcacacgttggcgcagttgttgctgctc 407
|||||||||||| |||||||||||||||| |||||||| |||||||||| || ||||
Sbjct: 256 ttgcactcgccgtcggggaagttctcggtgcggcacacgccggcgcagttgctgttgctg 197
Query: 408 atgcacaggcccttgaaccggtggctctgcgacaggcagtgcctcgcctccgccaccttg 467
| ||| |||||||||| |||||||||||||||||| || ||||||||| ||||
Sbjct: 196 aggcaggtgcccttgaacttgtggctctgcgacaggcacgtccgggcctccgccgccttc 137
Query: 468 gtcgtccccagctctgtggcgacgag---gaggagcaggaggacgagga 513
||||||||| ||||||||||||||| ||||||||| |||| |||||
Sbjct: 136 atcgtccccatctctgtggcgacgagcacgaggagcagcaggaggagga 88
>gb|BG344662.2|BG344662 HVSMEg0009P10f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0009P10f, mRNA sequence
Length = 605
Score = 109 bits (55), Expect = 1e-022
Identities = 141/169 (83%), Gaps = 3/169 (1%)
Strand = Plus / Minus
Query: 348 ttgcactcgccgccggggaagttctcggtctggcacacgttggcgcagttgttgctgctc 407
|||||||||||| |||||||||||||||| |||||||| |||||||||| || ||||
Sbjct: 256 ttgcactcgccgtcggggaagttctcggtgcggcacacgccggcgcagttgctgttgctg 197
Query: 408 atgcacaggcccttgaaccggtggctctgcgacaggcagtgcctcgcctccgccaccttg 467
| ||| |||||||||| |||||||||||||||||| || ||||||||| ||||
Sbjct: 196 aggcaggtgcccttgaacttgtggctctgcgacaggcacgtccgggcctccgccgccttc 137
Query: 468 gtcgtccccagctctgtggcgacgag---gaggagcaggaggacgagga 513
||||||||| ||||||||||||||| ||||||||| |||| |||||
Sbjct: 136 atcgtccccatctctgtggcgacgagcacgaggagcagcaggaggagga 88
>gb|AW983351.3|AW983351 HVSMEg0010F06f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0010F06f, mRNA sequence
Length = 608
Score = 109 bits (55), Expect = 1e-022
Identities = 141/169 (83%), Gaps = 3/169 (1%)
Strand = Plus / Minus
Query: 348 ttgcactcgccgccggggaagttctcggtctggcacacgttggcgcagttgttgctgctc 407
|||||||||||| |||||||||||||||| |||||||| |||||||||| || ||||
Sbjct: 255 ttgcactcgccgtcggggaagttctcggtgcggcacacgccggcgcagttgctgttgctg 196
Query: 408 atgcacaggcccttgaaccggtggctctgcgacaggcagtgcctcgcctccgccaccttg 467
| ||| |||||||||| |||||||||||||||||| || ||||||||| ||||
Sbjct: 195 aggcaggtgcccttgaacttgtggctctgcgacaggcacgtccgggcctccgccgccttc 136
Query: 468 gtcgtccccagctctgtggcgacgag---gaggagcaggaggacgagga 513
||||||||| ||||||||||||||| ||||||||| |||| |||||
Sbjct: 135 atcgtccccatctctgtggcgacgagcacgaggagcagcaggaggagga 87
>gb|BJ464544.1|BJ464544 BJ464544 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags34o01 5', mRNA sequence
Length = 583
Score = 109 bits (55), Expect = 1e-022
Identities = 141/169 (83%), Gaps = 3/169 (1%)
Strand = Plus / Minus
Query: 348 ttgcactcgccgccggggaagttctcggtctggcacacgttggcgcagttgttgctgctc 407
|||||||||||| |||||||||||||||| |||||||| |||||||||| || ||||
Sbjct: 266 ttgcactcgccgtcggggaagttctcggtgcggcacacgccggcgcagttgctgttgctg 207
Query: 408 atgcacaggcccttgaaccggtggctctgcgacaggcagtgcctcgcctccgccaccttg 467
| ||| |||||||||| |||||||||||||||||| || ||||||||| ||||
Sbjct: 206 aggcaggtgcccttgaacttgtggctctgcgacaggcacgtccgggcctccgccgccttc 147
Query: 468 gtcgtccccagctctgtggcgacgag---gaggagcaggaggacgagga 513
||||||||| ||||||||||||||| ||||||||| |||| |||||
Sbjct: 146 atcgtccccatctctgtggcgacgagcacgaggagcagcaggaggagga 98
>gb|BJ466896.1|BJ466896 BJ466896 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags34o01 3', mRNA sequence
Length = 560
Score = 109 bits (55), Expect = 1e-022
Identities = 141/169 (83%), Gaps = 3/169 (1%)
Strand = Plus / Plus
Query: 348 ttgcactcgccgccggggaagttctcggtctggcacacgttggcgcagttgttgctgctc 407
|||||||||||| |||||||||||||||| |||||||| |||||||||| || ||||
Sbjct: 306 ttgcactcgccgtcggggaagttctcggtgcggcacacgccggcgcagttgctgttgctg 365
Query: 408 atgcacaggcccttgaaccggtggctctgcgacaggcagtgcctcgcctccgccaccttg 467
| ||| |||||||||| |||||||||||||||||| || ||||||||| ||||
Sbjct: 366 aggcaggtgcccttgaacttgtggctctgcgacaggcacgtccgggcctccgccgccttc 425
Query: 468 gtcgtccccagctctgtggcgacgag---gaggagcaggaggacgagga 513
||||||||| ||||||||||||||| ||||||||| |||| |||||
Sbjct: 426 atcgtccccatctctgtggcgacgagcacgaggagcagcaggaggagga 474
>gb|BQ470043.1|BQ470043 HX01J18T HX Hordeum vulgare subsp. vulgare cDNA clone HX01J18
5-PRIME, mRNA sequence
Length = 497
Score = 109 bits (55), Expect = 1e-022
Identities = 141/169 (83%), Gaps = 3/169 (1%)
Strand = Plus / Minus
Query: 348 ttgcactcgccgccggggaagttctcggtctggcacacgttggcgcagttgttgctgctc 407
|||||||||||| |||||||||||||||| |||||||| |||||||||| || ||||
Sbjct: 247 ttgcactcgccgtcggggaagttctcggtgcggcacacgccggcgcagttgctgttgctg 188
Query: 408 atgcacaggcccttgaaccggtggctctgcgacaggcagtgcctcgcctccgccaccttg 467
| ||| |||||||||| |||||||||||||||||| || ||||||||| ||||
Sbjct: 187 aggcaggtgcccttgaacttgtggctctgcgacaggcacgtccgggcctccgccgccttc 128
Query: 468 gtcgtccccagctctgtggcgacgag---gaggagcaggaggacgagga 513
||||||||| ||||||||||||||| ||||||||| |||| |||||
Sbjct: 127 atcgtccccatctctgtggcgacgagcacgaggagcagcaggaggagga 79
>gb|BQ664970.1|BQ664970 HX01J18w HX Hordeum vulgare subsp. vulgare cDNA clone HX01J18
3-PRIME, mRNA sequence
Length = 467
Score = 109 bits (55), Expect = 1e-022
Identities = 141/169 (83%), Gaps = 3/169 (1%)
Strand = Plus / Plus
Query: 348 ttgcactcgccgccggggaagttctcggtctggcacacgttggcgcagttgttgctgctc 407
|||||||||||| |||||||||||||||| |||||||| |||||||||| || ||||
Sbjct: 253 ttgcactcgccgtcggggaagttctcggtgcggcacacgccggcgcagttgctgttgctg 312
Query: 408 atgcacaggcccttgaaccggtggctctgcgacaggcagtgcctcgcctccgccaccttg 467
| ||| |||||||||| |||||||||||||||||| || ||||||||| ||||
Sbjct: 313 aggcaggtgcccttgaacttgtggctctgcgacaggcacgtccgggcctccgccgccttc 372
Query: 468 gtcgtccccagctctgtggcgacgag---gaggagcaggaggacgagga 513
||||||||| ||||||||||||||| ||||||||| |||| |||||
Sbjct: 373 atcgtccccatctctgtggcgacgagcacgaggagcagcaggaggagga 421
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 86,656
Number of Sequences: 312970
Number of extensions: 86656
Number of successful extensions: 28403
Number of sequences better than 0.5: 280
Number of HSP's better than 0.5 without gapping: 280
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 27741
Number of HSP's gapped (non-prelim): 640
length of query: 665
length of database: 175,134,539
effective HSP length: 19
effective length of query: 646
effective length of database: 169,188,109
effective search space: 109295518414
effective search space used: 109295518414
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)