BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2437779.2.1
(3727 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BU999035.1|BU999035 HI12P13r HI Hordeum vulgare subsp. v... 696 0.0
gb|AV926207.1|AV926207 AV926207 K. Sato unpublished cDNA li... 694 0.0
gb|BU988138.1|BU988138 HF16M09r HF Hordeum vulgare subsp. v... 650 0.0
gb|AV926208.1|AV926208 AV926208 K. Sato unpublished cDNA li... 648 0.0
gb|BU984513.1|BU984513 HF04C11r HF Hordeum vulgare subsp. v... 620 e-176
gb|CA031458.1|CA031458 HX10A06r HX Hordeum vulgare subsp. v... 603 e-170
gb|BU986849.1|BU986849 HF13B10r HF Hordeum vulgare subsp. v... 573 e-161
gb|BM816138.1|BM816138 HC109B12_T3.ab1 HC Hordeum vulgare s... 565 e-159
gb|BF624748.2|BF624748 HVSMEa0017K05f Hordeum vulgare seedl... 555 e-156
gb|CA020225.1|CA020225 HV14L03r HV Hordeum vulgare subsp. v... 553 e-155
gb|CK124710.1|CK124710 BES1824110c01 BES1824 Hordeum vulgar... 547 e-154
gb|BU989992.1|BU989992 HF23J07r HF Hordeum vulgare subsp. v... 543 e-152
gb|BQ468619.1|BQ468619 HM01M13T HM Hordeum vulgare subsp. v... 529 e-148
gb|BG417165.1|BG417165 HVSMEk0016J06f Hordeum vulgare testa... 500 e-139
gb|AV932043.1|AV932043 AV932043 K. Sato unpublished cDNA li... 498 e-139
gb|AV836682.1|AV836682 AV836682 K. Sato unpublished cDNA li... 480 e-133
gb|CB882206.1|CB882206 HL01D01w HL Hordeum vulgare subsp. v... 472 e-131
gb|CB876338.1|CB876338 HX10P19w HX Hordeum vulgare subsp. v... 470 e-130
gb|BI776485.2|BI776485 EBpi05_SQ001_J01_R pistil, 8 DPA, no... 456 e-126
gb|AV914933.1|AV914933 AV914933 K. Sato unpublished cDNA li... 450 e-124
gb|AV925215.1|AV925215 AV925215 K. Sato unpublished cDNA li... 448 e-124
gb|BM816139.1|BM816139 HC105G09_T3.ab1 HC Hordeum vulgare s... 448 e-124
gb|BQ463573.1|BQ463573 HI05L24r HI Hordeum vulgare subsp. v... 438 e-121
gb|CA025257.1|CA025257 HZ51J24r HZ Hordeum vulgare subsp. v... 436 e-120
gb|CA009062.1|CA009062 HU13B03r HU Hordeum vulgare subsp. v... 434 e-120
gb|CB860194.1|CB860194 HI12P13w HI Hordeum vulgare subsp. v... 434 e-120
gb|AV931092.1|AV931092 AV931092 K. Sato unpublished cDNA li... 432 e-119
gb|CV061189.1|CV061189 BNEL65h6 Barley EST endosperm librar... 432 e-119
gb|BE193304.2|BE193304 HVSMEh0080I07f Hordeum vulgare 5-45 ... 430 e-118
gb|BU967242.1|BU967242 HB03K11r BC Hordeum vulgare subsp. v... 428 e-118
gb|AV931093.1|AV931093 AV931093 K. Sato unpublished cDNA li... 426 e-117
gb|CA012990.1|CA012990 HT07B01r HT Hordeum vulgare subsp. v... 418 e-115
gb|AV914152.1|AV914152 AV914152 K. Sato unpublished cDNA li... 416 e-114
gb|AL504419.1|AL504419 AL504419 Hordeum vulgare Barke roots... 412 e-113
gb|AV925770.1|AV925770 AV925770 K. Sato unpublished cDNA li... 404 e-111
gb|BU990492.1|BU990492 HF25D10r HF Hordeum vulgare subsp. v... 402 e-110
gb|BF255020.3|BF255020 HVSMEf0005K21f Hordeum vulgare seedl... 396 e-108
gb|CA022476.1|CA022476 HZ43F10r HZ Hordeum vulgare subsp. v... 396 e-108
gb|BF624752.2|BF624752 HVSMEa0017K09f Hordeum vulgare seedl... 391 e-106
gb|BI951084.1|BI951084 HVSMEl0024F09f Hordeum vulgare spike... 391 e-106
gb|CB883651.1|CB883651 HQ02O03w HQ Hordeum vulgare subsp. v... 383 e-104
gb|BG414971.1|BG414971 HVSMEk0004I03f Hordeum vulgare testa... 381 e-103
gb|AV913277.1|AV913277 AV913277 K. Sato unpublished cDNA li... 367 2e-099
gb|AV913278.1|AV913278 AV913278 K. Sato unpublished cDNA li... 367 2e-099
gb|BQ465284.1|BQ465284 HU03C22r HU Hordeum vulgare subsp. v... 367 2e-099
gb|BU995821.1|BU995821 HM11H13r HM Hordeum vulgare subsp. v... 365 7e-099
gb|CA009005.1|CA009005 HU12N24r HU Hordeum vulgare subsp. v... 361 1e-097
gb|AV930906.1|AV930906 AV930906 K. Sato unpublished cDNA li... 351 1e-094
gb|BQ471177.1|BQ471177 HV01F24T HV Hordeum vulgare subsp. v... 351 1e-094
gb|CA019265.1|CA019265 HV11G20r HV Hordeum vulgare subsp. v... 335 6e-090
gb|BE195554.3|BE195554 HVSMEh0089G13f Hordeum vulgare 5-45 ... 331 1e-088
gb|BI956967.1|BI956967 HVSMEn0006I08f Hordeum vulgare rachi... 329 4e-088
gb|BQ739972.1|BQ739972 HB107G12 HB Hordeum vulgare subsp. v... 325 6e-087
gb|BF259426.2|BF259426 HVSMEf0019B07f Hordeum vulgare seedl... 323 2e-086
gb|BI779022.2|BI779022 EBro01_SQ002_J19_R root, 3 week, hyd... 303 2e-080
gb|BJ464018.1|BJ464018 BJ464018 K. Sato unpublished cDNA li... 301 9e-080
gb|AV930365.1|AV930365 AV930365 K. Sato unpublished cDNA li... 291 8e-077
gb|BG368813.1|BG368813 HVSMEi0020M13f Hordeum vulgare 20 DA... 285 5e-075
gb|BQ471393.1|BQ471393 HV02E21r HV Hordeum vulgare subsp. v... 278 1e-072
gb|CA019676.1|CA019676 HV12L21r HV Hordeum vulgare subsp. v... 278 1e-072
gb|BJ466285.1|BJ466285 BJ466285 K. Sato unpublished cDNA li... 274 2e-071
gb|AW982533.3|AW982533 HVSMEg0003I09f Hordeum vulgare pre-a... 272 8e-071
gb|AV918572.1|AV918572 AV918572 K. Sato unpublished cDNA li... 266 5e-069
gb|AV920051.1|AV920051 AV920051 K. Sato unpublished cDNA li... 238 1e-060
gb|BI959339.1|BI959339 HVSMEn0019E20f Hordeum vulgare rachi... 222 6e-056
gb|BQ660846.1|BQ660846 HI05L24u HI Hordeum vulgare subsp. v... 222 6e-056
gb|BU967165.1|BU967165 HB03H16r BC Hordeum vulgare subsp. v... 222 6e-056
gb|AV934882.1|AV934882 AV934882 K. Sato unpublished cDNA li... 218 1e-054
gb|CA023762.1|CA023762 HZ47F10r HZ Hordeum vulgare subsp. v... 214 2e-053
gb|CA015150.1|CA015150 HT13H01r HT Hordeum vulgare subsp. v... 212 6e-053
gb|AL503512.1|AL503512 AL503512 Hordeum vulgare Barke roots... 210 2e-052
gb|CA030609.1|CA030609 HX07J05r HX Hordeum vulgare subsp. v... 210 2e-052
gb|CA030647.1|CA030647 HX07L05r HX Hordeum vulgare subsp. v... 210 2e-052
gb|BQ468579.1|BQ468579 HM01K12T HM Hordeum vulgare subsp. v... 182 6e-044
gb|AV919198.1|AV919198 AV919198 K. Sato unpublished cDNA li... 180 2e-043
gb|AV936150.1|AV936150 AV936150 K. Sato unpublished cDNA li... 178 9e-043
gb|AV918571.1|AV918571 AV918571 K. Sato unpublished cDNA li... 172 5e-041
gb|BQ766406.1|BQ766406 EBro08_SQ005_L20_R root, 3 week, dro... 172 5e-041
gb|CA026701.1|CA026701 HZ56L02r HZ Hordeum vulgare subsp. v... 172 5e-041
gb|CB882157.1|CB882157 HL01A17w HL Hordeum vulgare subsp. v... 168 8e-040
gb|BM370580.2|BM370580 EBro08_SQ004_K11_R root, 3 week, dro... 165 1e-038
gb|BM442929.2|BM442929 EBro02_SQ001_O08_R root, 3 week, hyd... 163 5e-038
gb|BF260649.2|BF260649 HVSMEf0022J05f Hordeum vulgare seedl... 159 8e-037
gb|BJ453328.1|BJ453328 BJ453328 K. Sato unpublished cDNA li... 157 3e-036
gb|AV836573.1|AV836573 AV836573 K. Sato unpublished cDNA li... 155 1e-035
gb|AL503528.1|AL503528 AL503528 Hordeum vulgare Barke roots... 153 5e-035
gb|BF258768.2|BF258768 HVSMEf0016K01f Hordeum vulgare seedl... 153 5e-035
gb|BI779535.2|BI779535 EBro01_SQ004_F12_R root, 3 week, hyd... 153 5e-035
gb|CA031178.1|CA031178 HX09D18r HX Hordeum vulgare subsp. v... 151 2e-034
gb|BQ660756.1|BQ660756 HI05F03u HI Hordeum vulgare subsp. v... 149 8e-034
gb|BG343963.1|BG343963 HVSMEg0007D23f Hordeum vulgare pre-a... 147 3e-033
gb|BI948889.1|BI948889 HVSMEl0011E15f Hordeum vulgare spike... 147 3e-033
gb|CA017356.1|CA017356 HV12L21u HV Hordeum vulgare subsp. v... 145 1e-032
gb|BQ469740.1|BQ469740 HZ01L16r HZ Hordeum vulgare subsp. v... 143 5e-032
gb|BE411751.1|BE411751 ISC008.H06F990806 ITEC ISC Barley Le... 139 8e-031
gb|AL505671.1|AL505671 AL505671 Hordeum vulgare Barke roots... 139 8e-031
gb|BG368285.2|BG368285 HVSMEi0017H01f Hordeum vulgare 20 DA... 139 8e-031
gb|AV929091.1|AV929091 AV929091 K. Sato unpublished cDNA li... 139 8e-031
gb|BJ460872.1|BJ460872 BJ460872 K. Sato unpublished cDNA li... 139 8e-031
gb|CB875201.1|CB875201 HX07J05w HX Hordeum vulgare subsp. v... 139 8e-031
gb|CB875240.1|CB875240 HX07L05w HX Hordeum vulgare subsp. v... 139 8e-031
gb|AV832882.1|AV832882 AV832882 K. Sato unpublished cDNA li... 135 1e-029
gb|CA024787.1|CA024787 HZ50E24r HZ Hordeum vulgare subsp. v... 131 2e-028
gb|BG343763.2|BG343763 HVSMEg0006L01f Hordeum vulgare pre-a... 129 7e-028
gb|BQ663566.1|BQ663566 HU03C22u HU Hordeum vulgare subsp. v... 129 7e-028
gb|BJ468308.1|BJ468308 BJ468308 K. Sato unpublished cDNA li... 125 1e-026
gb|BF263370.1|BF263370 HV_CEa0006J03f Hordeum vulgare seedl... 123 4e-026
gb|BE214667.2|BE214667 HV_CEb0004C10f Hordeum vulgare seedl... 123 4e-026
gb|BJ447699.1|BJ447699 BJ447699 K. Sato unpublished cDNA li... 123 4e-026
gb|BJ455449.1|BJ455449 BJ455449 K. Sato unpublished cDNA li... 123 4e-026
gb|BQ472793.1|BQ472793 HB01H14r BC Hordeum vulgare subsp. v... 123 4e-026
gb|BQ467842.1|BQ467842 HR01B16r HR Hordeum vulgare subsp. v... 119 7e-025
gb|BF064711.2|BF064711 HV_CEb0017G02f Hordeum vulgare seedl... 115 1e-023
gb|BU985115.1|BU985115 HF06C19r HF Hordeum vulgare subsp. v... 115 1e-023
gb|BE060794.1|BE060794 HVSMEg0013G05f Hordeum vulgare pre-a... 113 4e-023
gb|BG300950.1|BG300950 HVSMEb0019A22f Hordeum vulgare seedl... 113 4e-023
gb|BI949437.1|BI949437 HVSMEl0013O09f Hordeum vulgare spike... 113 4e-023
gb|BI955734.1|BI955734 HVSMEm0024E12f Hordeum vulgare green... 113 4e-023
gb|AV917031.1|AV917031 AV917031 K. Sato unpublished cDNA li... 113 4e-023
gb|AV927219.1|AV927219 AV927219 K. Sato unpublished cDNA li... 113 4e-023
gb|AJ462437.1|AJ462437 AJ462437 S00002 Hordeum vulgare subs... 113 4e-023
gb|BU971759.1|BU971759 HB19J12r BC Hordeum vulgare subsp. v... 113 4e-023
gb|CA025840.1|CA025840 HZ53E19r HZ Hordeum vulgare subsp. v... 113 4e-023
gb|AL505797.1|AL505797 AL505797 Hordeum vulgare Barke roots... 111 2e-022
gb|BU994416.1|BU994416 HM07A02r HM Hordeum vulgare subsp. v... 109 7e-022
gb|CA019440.1|CA019440 HV11P23r HV Hordeum vulgare subsp. v... 109 7e-022
gb|BI960696.1|BI960696 HVSMEn0025O11f Hordeum vulgare rachi... 107 3e-021
gb|BQ463453.1|BQ463453 HI05F03r HI Hordeum vulgare subsp. v... 107 3e-021
gb|BQ464910.1|BQ464910 HU02B19r HU Hordeum vulgare subsp. v... 105 1e-020
gb|BE411894.1|BE411894 ISC010.D05F990917 ITEC ISC Barley Le... 103 4e-020
gb|AL503049.1|AL503049 AL503049 Hordeum vulgare Barke roots... 103 4e-020
gb|BF258638.2|BF258638 HVSMEf0016E13f Hordeum vulgare seedl... 103 4e-020
gb|BM376392.2|BM376392 EBem05_SQ002_B14_R embryo, 14 DPA, n... 103 4e-020
gb|BF628750.2|BF628750 HVSMEb0007M11f Hordeum vulgare seedl... 100 6e-019
gb|AV923333.1|AV923333 AV923333 K. Sato unpublished cDNA li... 100 6e-019
gb|AV928513.1|AV928513 AV928513 K. Sato unpublished cDNA li... 100 6e-019
gb|BU972673.1|BU972673 HB22G06r BC Hordeum vulgare subsp. v... 100 6e-019
gb|CA011082.1|CA011082 HT07B01u HT Hordeum vulgare subsp. v... 100 6e-019
gb|CA020497.1|CA020497 HZ36H21r HZ Hordeum vulgare subsp. v... 100 6e-019
gb|BQ465804.1|BQ465804 HU04L18r HU Hordeum vulgare subsp. v... 98 3e-018
gb|BI958555.1|BI958555 HVSMEn0015J16f Hordeum vulgare rachi... 94 4e-017
gb|CA015920.1|CA015920 HV11G20u HV Hordeum vulgare subsp. v... 94 4e-017
gb|BF259974.3|BF259974 HVSMEf0020M07f Hordeum vulgare seedl... 92 2e-016
gb|BE060456.3|BE060456 HVSMEg0012F17f Hordeum vulgare pre-a... 92 2e-016
gb|BQ469182.1|BQ469182 HM03K08r HM Hordeum vulgare subsp. v... 90 6e-016
gb|AV923841.1|AV923841 AV923841 K. Sato unpublished cDNA li... 86 1e-014
gb|BI957138.1|BI957138 HVSMEn0007L07f Hordeum vulgare rachi... 84 4e-014
gb|AV923682.1|AV923682 AV923682 K. Sato unpublished cDNA li... 84 4e-014
gb|BQ765797.1|BQ765797 EBro03_SQ008_O01_R root, 3 week, wat... 82 2e-013
gb|AL500926.1|AL500926 AL500926 Hordeum vulgare Barke roots... 78 2e-012
gb|BG299430.2|BG299430 HVSMEa0019P14f Hordeum vulgare seedl... 78 2e-012
gb|AL501744.1|AL501744 AL501744 Hordeum vulgare Barke roots... 70 6e-010
gb|BJ447591.1|BJ447591 BJ447591 K. Sato unpublished cDNA li... 70 6e-010
gb|BQ768380.1|BQ768380 EBro08_SQ011_E16_R root, 3 week, dro... 70 6e-010
gb|CA017986.1|CA017986 HV07A23r HV Hordeum vulgare subsp. v... 68 2e-009
gb|AV836384.1|AV836384 AV836384 K. Sato unpublished cDNA li... 64 4e-008
gb|BQ760759.1|BQ760759 EBro03_SQ003_G08_R root, 3 week, wat... 64 4e-008
gb|BF253907.1|BF253907 HVSMEf0002H08f Hordeum vulgare seedl... 60 6e-007
gb|BI956476.1|BI956476 HVSMEn0003J21f Hordeum vulgare rachi... 60 6e-007
gb|BE216853.1|BE216853 HV_CEb0011N06f Hordeum vulgare seedl... 60 6e-007
gb|BI958142.1|BI958142 HVSMEn0013J15f Hordeum vulgare rachi... 60 6e-007
gb|BQ767053.1|BQ767053 EBro08_SQ007_H22_R root, 3 week, dro... 60 6e-007
gb|BU996532.1|BU996532 HM13O16r HM Hordeum vulgare subsp. v... 60 6e-007
gb|AL499724.1|AL499724 AL499724 Hordeum vulgare Barke etiol... 56 9e-006
gb|BM368747.1|BM368747 EBem08_SQ004_H23_R embryo, 40 DPA, n... 56 9e-006
gb|BM372877.2|BM372877 EBma04_SQ002_E01_R maternal, 10 DPA,... 56 9e-006
gb|BU969975.1|BU969975 HB13D11r BC Hordeum vulgare subsp. v... 56 9e-006
gb|BG366351.1|BG366351 HVSMEi0006M09f Hordeum vulgare 20 DA... 54 3e-005
gb|BI948539.1|BI948539 HVSMEl0010A07f Hordeum vulgare spike... 54 3e-005
gb|BQ468970.1|BQ468970 HM02P11r HM Hordeum vulgare subsp. v... 54 3e-005
gb|BQ469880.1|BQ469880 HX01C05T HX Hordeum vulgare subsp. v... 54 3e-005
gb|CA027985.1|CA027985 HZ60K07r HZ Hordeum vulgare subsp. v... 50 5e-004
gb|BI956663.1|BI956663 HVSMEn0004K08f Hordeum vulgare rachi... 48 0.002
gb|BI959331.1|BI959331 HVSMEn0019E12f Hordeum vulgare rachi... 48 0.002
gb|BG365821.2|BG365821 HVSMEi0004F18f Hordeum vulgare 20 DA... 46 0.008
gb|AV836609.1|AV836609 AV836609 K. Sato unpublished cDNA li... 44 0.033
gb|BM442942.2|BM442942 EBro02_SQ001_P12_R root, 3 week, hyd... 44 0.033
gb|BU996252.1|BU996252 HM13A10r HM Hordeum vulgare subsp. v... 44 0.033
gb|BM817226.1|BM817226 HC109A10_T3.ab1 HC Hordeum vulgare s... 42 0.13
gb|BQ661800.1|BQ661800 HP01F17w HP Hordeum vulgare subsp. v... 42 0.13
>gb|BU999035.1|BU999035 HI12P13r HI Hordeum vulgare subsp. vulgare cDNA clone HI12P13
5-PRIME, mRNA sequence
Length = 656
Score = 696 bits (351), Expect = 0.0
Identities = 574/647 (88%), Gaps = 1/647 (0%)
Strand = Plus / Minus
Query: 1700 ggaaattggacataacagacattccttcctaggtttgggtccataaggaagcacatagct 1759
||||||||||||||||||| ||||||||||| || ||||||||||| |||||||||||
Sbjct: 656 ggaaattggacataacagattttccttcctagattagggtccataagaaagcacatagcc 597
Query: 1760 tctcgaagagccttgctattattgatgtagtggtcacagtcaagattcaacatgtattgc 1819
|||| ||||| ||||||| ||||||||||| ||||| ||||||||||||||||| |||
Sbjct: 596 tctcttagagcgctgctattgttgatgtagtgatcacaatcaagattcaacatgtactgc 537
Query: 1820 ccattagtaaggacagctgatacacgaacaagtgcattcatggcaccagccttcttgtga 1879
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 536 ccattagtaaggacagctgatacacgaacaagtgcattcatggcaccagctttcttgtgg 477
Query: 1880 tgttggaatccaggacgtttttcacgagacacataaaccaaacgaggaagttcattgcct 1939
|| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct: 476 tgctggaatccaggacgtttctcacgagacacataaaccaaacgaggaagctcattgcca 417
Query: 1940 tcaacgtcaagccctccactgtgacccaggaaaacctgaatcattccaggatggtcccta 1999
||| || || |||||||| ||||| ||||||||||||| |||||||||||||||||||
Sbjct: 416 tcagtatcgaggcctccactatgaccaaggaaaacctgaagcattccaggatggtcccta 357
Query: 2000 gtattgttcccaggccaaggtgtaccatcttgcatgatccatccctcctcgggaactttt 2059
||||||||||||||||||||||| || ||||||||||||||||| ||||| ||||||||
Sbjct: 356 gtattgttcccaggccaaggtgtgccgtcttgcatgatccatccttcctcaggaactttc 297
Query: 2060 tgtgcattggctacaagaccattgatacgaactttgaattcttcatattctctcttcatg 2119
| || ||||||||||| | ||| | ||||||||||| |||||||||||||||||||||
Sbjct: 296 tcggctttggctacaaggctattaacgcgaactttgaactcttcatattctctcttcatg 237
Query: 2120 gcccggcgttctttcacaaatgaagtttgaactttgtctttcaagtaatcaattttctga 2179
|| || || ||||| || |||||||| |||||||||||||||||| ||||||||||||||
Sbjct: 236 gctcgacggtctttaacgaatgaagtctgaactttgtctttcaagaaatcaattttctga 177
Query: 2180 gcaaagtaccattccggagccctaggctctatgttgtacttcttacagaacggaacccat 2239
||||||||||| || || || || || |||||||| ||||| ||||| ||||| ||||||
Sbjct: 176 gcaaagtaccactctggtgctctgggttctatgttatactttttacaaaacggtacccat 117
Query: 2240 tttctagcaaactctgaagtttcagagagagcatcaaaagtcagcatagcagctccatca 2299
|||||||||||||||||||| |||| || |||||||| || ||||| ||||||||||||
Sbjct: 116 tttctagcaaactctgaagtctcagcaagtgcatcaaaggtaagcatcgcagctccatca 57
Query: 2300 tccgaaacatagcaagataccttgtcaaccggataatcgacagcaag 2346
|| || ||||||||||||| ||||||||| || || || ||||||||
Sbjct: 56 tcagatacatagcaagata-cttgtcaacagggtagtccacagcaag 11
>gb|AV926207.1|AV926207 AV926207 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp. vulgare
cDNA clone basd18i05 5', mRNA sequence
Length = 668
Score = 694 bits (350), Expect = 0.0
Identities = 585/662 (88%), Gaps = 1/662 (0%)
Strand = Plus / Minus
Query: 434 gcaaagaagagcttcccgaaaagaggtccccatgactggtaaccgctattgattgcgtag 493
||||||||||||||||||||||| |||||||||||||| || ||| | ||||| ||||||
Sbjct: 667 gcaaagaagagcttcccgaaaagcggtccccatgactgatagccgatgttgatcgcgtag 608
Query: 494 gaaatgccagcgaccacgccgaccaggttgatgatcaaaatagtggttggtgggatcaga 553
|| | ||||| || || ||||| |||||||||||||| ||||| |||||||||||||||
Sbjct: 607 gaggtaccagccacaacaccgacaaggttgatgatcaagatagttgttggtgggatcaga 548
Query: 554 agcgttgtccacttgaacatgtagagctcggcaaaatcaccttcttcgtcagtggcctta 613
|| || ||||||||||||||||||||||||||||||||| |||||||| | || ||
Sbjct: 547 agagtcgtccacttgaacatgtagagctcggcaaaatcattatcttcgtcggatgctttt 488
Query: 614 gaggtgacagtgaagctcgtgtcgataccagcaagcaccttcaggagaccctggaagacg 673
|| |||||||||||||| |||||||| |||||||| |||||||||||||| ||||||||
Sbjct: 487 gaagtgacagtgaagctggtgtcgatgccagcaagtaccttcaggagaccttggaagaca 428
Query: 674 gcaaataaatgcgcagaaataccaccaatgacccagaactgctcgttcctccaccattca 733
||||| | ||| ||||||||||| || |||||||||||||| || ||||||||||| ||
Sbjct: 427 gcaaacagatgtgcagaaatacctccgatgacccagaactgttcattcctccaccactcg 368
Query: 734 tcaatgccaacaccactccacctcatctcaaggataccagtggcaaagattgagataaag 793
|| ||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 367 tcgatgccaacaccgctccacctcatctcaaggataccagtggcaaagatcgaaataaag 308
Query: 794 agcgatataaaccaaacactctctaggttactaatctttgggatgatgaacttcccagtg 853
|| || |||||||||| ||| | | ||| ||||||| ||||||||||||||| || |||
Sbjct: 307 agagagataaaccaaatactggcaatgttgctaatctgtgggatgatgaactttcccgtg 248
Query: 854 agaagacaaactgctggcaatatgcagtacaggaggagcgggattgatgtgagtggataa 913
||||||||||| ||||| ||||||||||| | |||||| || |||||||||||||||||
Sbjct: 247 agaagacaaacagctggtaatatgcagtatatgaggagtggtattgatgtgagtggatag 188
Query: 914 attgttgtgttgatataagcaaatctctccaggaatttaagccgacctccatagccatac 973
|| || |||||||| ||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 187 atagtggtgttgatgtaagcaaatctctccaggaatttaagccgtccgccatagccatac 128
Query: 974 catatgggacaatgcctgctgaaaagaatttcaatggaaccaagagcccaccgaagcact 1033
||||||||||||||||| |||||||||||||| | |||||||| |||||||||||||||
Sbjct: 127 catatgggacaatgcctactgaaaagaatttccactgaaccaagcgcccaccgaagcact 68
Query: 1034 tgattcaaacgatccgaaaggttgataggagcagatcccttgaaagctggtcgcttaggc 1093
||||||| |||||| |||||||||||||| ||||| ||||||||||| ||||||||||||
Sbjct: 67 tgattcagacgatctgaaaggttgataggggcagagcccttgaaagc-ggtcgcttaggc 9
Query: 1094 at 1095
||
Sbjct: 8 at 7
>gb|BU988138.1|BU988138 HF16M09r HF Hordeum vulgare subsp. vulgare cDNA clone HF16M09
5-PRIME, mRNA sequence
Length = 643
Score = 650 bits (328), Expect = 0.0
Identities = 547/620 (88%)
Strand = Plus / Minus
Query: 386 cccatgaggcccttgaggaaggggtacaggtggacaatcacccagaacgcaaagaagagc 445
||||| || ||||||||||| ||||||| ||||| |||||||||||| ||||||||||||
Sbjct: 638 cccattagccccttgaggaatgggtacaagtggataatcacccagaaggcaaagaagagc 579
Query: 446 ttcccgaaaagaggtccccatgactggtaaccgctattgattgcgtaggaaatgccagcg 505
||||||||||| |||||||||||||| || ||||| ||||| |||||||| | |||||
Sbjct: 578 ttcccgaaaagcggtccccatgactgatagccgctgttgatcgcgtaggaggtaccagcc 519
Query: 506 accacgccgaccaggttgatgatcaaaatagtggttggtgggatcagaagcgttgtccac 565
|| || ||||| |||||||||||||| ||||| ||||||||||||||||| || ||||||
Sbjct: 518 acaacaccgacaaggttgatgatcaagatagttgttggtgggatcagaagagtcgtccac 459
Query: 566 ttgaacatgtagagctcggcaaaatcaccttcttcgtcagtggccttagaggtgacagtg 625
||||||||||||||||||||||||||| |||||||| | || || || |||||||||
Sbjct: 458 ttgaacatgtagagctcggcaaaatcattatcttcgtcggatgcttttgaagtgacagtg 399
Query: 626 aagctcgtgtcgataccagcaagcaccttcaggagaccctggaagacggcaaataaatgc 685
||||| |||||||| |||||||| |||||||||||||| |||||||| ||||| | |||
Sbjct: 398 aagctggtgtcgatgccagcaagtaccttcaggagaccttggaagacagcaaacagatgt 339
Query: 686 gcagaaataccaccaatgacccagaactgctcgttcctccaccattcatcaatgccaaca 745
||||||||||| || |||||||||||||| || ||||||||||| || || |||||||||
Sbjct: 338 gcagaaatacctccgatgacccagaactgttcattcctccaccactcgtcgatgccaaca 279
Query: 746 ccactccacctcatctcaaggataccagtggcaaagattgagataaagagcgatataaac 805
|| ||||||||||||||||||||||||||||||||||| || |||||||| || ||||||
Sbjct: 278 ccgctccacctcatctcaaggataccagtggcaaagatcgaaataaagagagagataaac 219
Query: 806 caaacactctctaggttactaatctttgggatgatgaacttcccagtgagaagacaaact 865
|||| ||| | | ||| ||||||| ||||||||||||||| || ||||||||||||||
Sbjct: 218 caaatactggcaatgttgctaatctgtgggatgatgaactttcccgtgagaagacaaaca 159
Query: 866 gctggcaatatgcagtacaggaggagcgggattgatgtgagtggataaattgttgtgttg 925
||||| ||||||||||| | |||||| || ||||||||||||||||| || || ||||||
Sbjct: 158 gctggtaatatgcagtatatgaggagtggtattgatgtgagtggatagatagtggtgttg 99
Query: 926 atataagcaaatctctccaggaatttaagccgacctccatagccataccatatgggacaa 985
|| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 98 atgtaagcaaatctctccaggaatttaagccgtccgccatagccataccatatgggacaa 39
Query: 986 tgcctgctgaaaagaatttc 1005
||||| ||||||||||||||
Sbjct: 38 tgcctactgaaaagaatttc 19
>gb|AV926208.1|AV926208 AV926208 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp. vulgare
cDNA clone basd18i06 5', mRNA sequence
Length = 586
Score = 648 bits (327), Expect = 0.0
Identities = 519/583 (89%)
Strand = Plus / Minus
Query: 512 ccgaccaggttgatgatcaaaatagtggttggtgggatcagaagcgttgtccacttgaac 571
||||| |||||||||||||| ||||| ||||||||||||||||| || ||||||||||||
Sbjct: 583 ccgacaaggttgatgatcaagatagttgttggtgggatcagaagagtcgtccacttgaac 524
Query: 572 atgtagagctcggcaaaatcaccttcttcgtcagtggccttagaggtgacagtgaagctc 631
||||||||||||||||||||| |||||||| | || || || ||||||||||||||
Sbjct: 523 atgtagagctcggcaaaatcattatcttcgtcggatgcttttgaagtgacagtgaagctg 464
Query: 632 gtgtcgataccagcaagcaccttcaggagaccctggaagacggcaaataaatgcgcagaa 691
|||||||| |||||||| |||||||||||||| |||||||| ||||| | ||| ||||||
Sbjct: 463 gtgtcgatgccagcaagtaccttcaggagaccttggaagacagcaaacagatgtgcagaa 404
Query: 692 ataccaccaatgacccagaactgctcgttcctccaccattcatcaatgccaacaccactc 751
||||| || |||||||||||||| || ||||||||||| || || ||||||||||| |||
Sbjct: 403 atacctccgatgacccagaactgttcattcctccaccactcgtcgatgccaacaccgctc 344
Query: 752 cacctcatctcaaggataccagtggcaaagattgagataaagagcgatataaaccaaaca 811
|||||||||||||||||||||||||||||||| || |||||||| || |||||||||| |
Sbjct: 343 cacctcatctcaaggataccagtggcaaagatcgaaataaagagagagataaaccaaata 284
Query: 812 ctctctaggttactaatctttgggatgatgaacttcccagtgagaagacaaactgctggc 871
|| | | ||| ||||||| ||||||||||||||| || |||||||||||||| |||||
Sbjct: 283 ctggcaatgttgctaatctgtgggatgatgaactttcccgtgagaagacaaacagctggt 224
Query: 872 aatatgcagtacaggaggagcgggattgatgtgagtggataaattgttgtgttgatataa 931
||||||||||| | |||||| || ||||||||||||||||| || || |||||||| |||
Sbjct: 223 aatatgcagtatatgaggagtggtattgatgtgagtggatagatagtggtgttgatgtaa 164
Query: 932 gcaaatctctccaggaatttaagccgacctccatagccataccatatgggacaatgcctg 991
|||||||||||||||||||||||||| || |||||||||||||||||||||||||||||
Sbjct: 163 gcaaatctctccaggaatttaagccgtccgccatagccataccatatgggacaatgccta 104
Query: 992 ctgaaaagaatttcaatggaaccaagagcccaccgaagcacttgattcaaacgatccgaa 1051
|||||||||||||| | |||||||| |||||||||||||||||||||| |||||| |||
Sbjct: 103 ctgaaaagaatttccactgaaccaagcgcccaccgaagcacttgattcagacgatctgaa 44
Query: 1052 aggttgataggagcagatcccttgaaagctggtcgcttaggca 1094
||||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 43 aggttgataggggcagagcccttgaaagctggtcgcttaggca 1
>gb|BU984513.1|BU984513 HF04C11r HF Hordeum vulgare subsp. vulgare cDNA clone HF04C11
5-PRIME, mRNA sequence
Length = 629
Score = 620 bits (313), Expect = e-176
Identities = 526/593 (88%), Gaps = 3/593 (0%)
Strand = Plus / Minus
Query: 539 gttggtgggatcagaagcgttgtccacttgaacatgtagagctcggcaaaatcaccttct 598
||||||||||||||||| || ||||||||||||||||||||||||||||||||| |||
Sbjct: 629 gttggtgggatcagaagagtcgtccacttgaacatgtagagctcggcaaaatcattatct 570
Query: 599 tcgtcagtggccttagaggtgacagtgaagctcgtgtcgataccagcaagcaccttcagg 658
||||| | || || || |||||||||||||| |||||||| |||||||| |||||||||
Sbjct: 569 tcgtcggatgcttttgaagtgacagtgaagctggtgtcgatgccagcaagtaccttcagg 510
Query: 659 agaccctggaagacggcaaataaatgcgcagaaataccaccaatgacccagaactgctcg 718
||||| |||||||| ||||| | ||| ||||||||||| || |||||||||||||| ||
Sbjct: 509 agaccttggaagacagcaaacagatgtgcagaaatacctccgatgacccagaactgttca 450
Query: 719 ttcctccaccattcatcaatgccaacaccactccacctcatctcaaggataccagtggca 778
||||||||||| || || ||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 449 ttcctccaccactcgtcgatgccaacaccgctccacctcatctcaaggataccagtggca 390
Query: 779 aagattgagataaagagcgatataaaccaaacactctctaggttactaatctttgggatg 838
||||| || |||||||| || |||||||||| ||| | | ||| ||||||| |||||||
Sbjct: 389 aagatcgaaataaagagagagataaaccaaatactggcaatgttgctaatctgtgggatg 330
Query: 839 atgaacttcccagtgagaagacaaactgctggcaatatgcagtacaggaggagcgggatt 898
|||||||| || |||||||||||||| ||||| ||||||||||| | |||||| || |||
Sbjct: 329 atgaactttcccgtgagaagacaaacagctggtaatatgcagtatatgaggagtggtatt 270
Query: 899 gatgtgagtggataaattgttgtgttgatataagcaaatctctccaggaatttaagccga 958
|||||||||||||| || || |||||||| |||||||||||||||||||||||||||||
Sbjct: 269 gatgtgagtggatagatagtggtgttgatgtaagcaaatctctccaggaatttaagccgt 210
Query: 959 cctccatagccataccatatgggacaatgcctgctgaaaagaatttcaatggaaccaaga 1018
|| ||||||||||||||||||||||||||||| |||||||||||||| | ||||||||
Sbjct: 209 ccgccatagccataccatatgggacaatgcctactgaaaagaatttccactgaaccaagc 150
Query: 1019 gcccaccgaagcacttgattcaaacgatccgaaaggttgataggagcagatcccttgaaa 1078
|||||||||||||||||||||| |||||| |||||||||||||| ||||| ||||| |||
Sbjct: 149 gcccaccgaagcacttgattcagacgatctgaaaggttgataggggcagagccctt-aaa 91
Query: 1079 gctggtcgcttaggcatgcagtagattgatcgccagcctcgagcatgcatctt 1131
||||||||||||||||| |||||||||| |||||||| || |||||||||||
Sbjct: 90 gctggtcgcttaggcatacagtagattg-ccgccagccacg-gcatgcatctt 40
>gb|CA031458.1|CA031458 HX10A06r HX Hordeum vulgare subsp. vulgare cDNA clone HX10A06
5-PRIME, mRNA sequence
Length = 627
Score = 603 bits (304), Expect = e-170
Identities = 541/620 (87%)
Strand = Plus / Minus
Query: 2282 agcatagcagctccatcatccgaaacatagcaagataccttgtcaaccggataatcgaca 2341
||||| |||||||||||||| || |||||||||||||| |||||||| || || || |||
Sbjct: 620 agcatcgcagctccatcatcagatacatagcaagatactttgtcaacagggtagtccaca 561
Query: 2342 gcaaggatggaaagcacagtatttgcagtgacaagaggaggctccttcataggatccaca 2401
|||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 560 gcaaggatagaaagcacagtatttgcagtgacgagaggaggctccttcataggatccaca 501
Query: 2402 gtactgacaaagatatcaacaggagctaattgagatggttcaccttctcggtcatacctt 2461
||||||||||| || ||||||||||| || ||||| ||||| || ||||||||||||
Sbjct: 500 gtactgacaaaaatgtcaacaggagccaactgagacaactcaccatcccggtcatacctt 441
Query: 2462 aaagccagtctatcaaggtatgtttcacggttgattggggaccactttgggaactgatcc 2521
|||||||| || |||||||| |||||||| || | ||| |||||||| ||||||||||||
Sbjct: 440 aaagccagcctgtcaaggtaagtttcacgattcactggagaccacttggggaactgatcc 381
Query: 2522 aaaatccaggacaaagcaaaccagatctcacatatgacggataaaagccacagtggatat 2581
||||||||||| ||||||||||| ||||||||||| || |||| ||||| |||||||||
Sbjct: 380 aaaatccaggaaaaagcaaaccaaatctcacatatcaccgatagcagccaaagtggatat 321
Query: 2582 gcattgttcacaggatgtgtgatacggtagcgcaagaatatgcatagaacagccaaacgt 2641
||||| ||||| | ||||||||||||| ||| ||| ||||| || ||| ||| |||
Sbjct: 320 gcattacggacagggtttgtgatacggtagtgcaggaagatgcagaggacaatcaatcgt 261
Query: 2642 agcacaatgaccattctgtacggatttattctggatgaaggaattggcacttttctagat 2701
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 260 agcacaatgaccattctgtagggatttattctggatgaaggaattggcacttttctagag 201
Query: 2702 agaggttgccgagtttcatcattcagtaaggcatcttccatgttataatcagtagaagca 2761
||||| || || ||||||||||||||||||| ||||||||| || |||||| | |||
Sbjct: 200 agaggctggcgtgtttcatcattcagtaaggggtcttccatgccgtagtcagtacatgca 141
Query: 2762 tcaatatcagcaactccacgcccttctgatggagcaatgcttgttccattggtcatagga 2821
|| |||||| || |||||| ||||| || |||||||||||||||||||| ||||| |||
Sbjct: 140 tcgatatcaccatttccacggccttcggaaggagcaatgcttgttccattagtcatggga 81
Query: 2822 attgcacctttatccttcattttccatccatccaccctctctttccatgcaacattgcca 2881
|||||||| || || ||||||||||| ||||| || ||||||||||| ||||||||||||
Sbjct: 80 attgcacccttgtctttcattttccagccatcaactctctctttccacgcaacattgcca 21
Query: 2882 aggctaccggagaactccct 2901
|||||||| |||||||||||
Sbjct: 20 aggctaccagagaactccct 1
>gb|BU986849.1|BU986849 HF13B10r HF Hordeum vulgare subsp. vulgare cDNA clone HF13B10
5-PRIME, mRNA sequence
Length = 622
Score = 573 bits (289), Expect = e-161
Identities = 526/605 (86%)
Strand = Plus / Minus
Query: 308 cgaacccacatcagggaaaagatcgacgcaaggaggatagcccagacaacgacaatggtc 367
|||||||||| || ||| ||||| || ||||| ||||| |||||||| || || ||||||
Sbjct: 619 cgaacccacagcaaggagaagatggatgcaagaaggatggcccagacgacaacgatggtc 560
Query: 368 ggcgtgcggttctgcttccccatgaggcccttgaggaaggggtacaggtggacaatcacc 427
||||||||||||||| ||||| || ||||||||||| ||||||| ||||| |||||||
Sbjct: 559 ggcgtgcggttctgccgtcccattagccccttgaggaatgggtacaagtggataatcacc 500
Query: 428 cagaacgcaaagaagagcttcccgaaaagaggtccccatgactggtaaccgctattgatt 487
||||| ||||||||||||||||||||||| |||||||||||||| || ||||| |||||
Sbjct: 499 cagaaggcaaagaagagcttcccgaaaagcggtccccatgactgatagccgctgttgatc 440
Query: 488 gcgtaggaaatgccagcgaccacgccgaccaggttgatgatcaaaatagtggttggtggg 547
|||||||| | ||||| || || ||||| |||||||||||||| ||||| |||||||||
Sbjct: 439 gcgtaggaggtaccagccacaacaccgacaaggttgatgatcaagatagttgttggtggg 380
Query: 548 atcagaagcgttgtccacttgaacatgtagagctcggcaaaatcaccttcttcgtcagtg 607
|||||||| || ||||||||||||||||||||||||||||||||| |||||||| |
Sbjct: 379 atcagaagagtcgtccacttgaacatgtagagctcggcaaaatcattatcttcgtcggat 320
Query: 608 gccttagaggtgacagtgaagctcgtgtcgataccagcaagcaccttcaggagaccctgg 667
|| || || |||||||||||||| |||||||| |||||||| |||||||||||||| |||
Sbjct: 319 gcttttgaagtgacagtgaagctggtgtcgatgccagcaagtaccttcaggagaccttgg 260
Query: 668 aagacggcaaataaatgcgcagaaataccaccaatgacccagaactgctcgttcctccac 727
||||| ||||| | ||| ||||||||||| || |||||||||||||| || |||||||||
Sbjct: 259 aagacagcaaacagatgtgcagaaatacctccgatgacccagaactgttcattcctccac 200
Query: 728 cattcatcaatgccaacaccactccacctcatctcaaggataccagtggcaaagattgag 787
|| || || ||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 199 cactcgtcgatgccaacaccgctccacctcatctcaaggataccagtggcaaagatcgaa 140
Query: 788 ataaagagcgatataaaccaaacactctctaggttactaatctttgggatgatgaacttc 847
|||||||| || |||||||||| ||| | | ||| ||||||| |||||||||||||||
Sbjct: 139 ataaagagagagataaaccaaatactggcaatgttgctaatctgtgggatgatgaacttt 80
Query: 848 ccagtgagaagacaaactgctggcaatatgcagtacaggaggagcgggattgatgtgagt 907
|| |||||||||||||| ||||| ||||||||||| | |||||| || ||||||||||||
Sbjct: 79 cccgtgagaagacaaacagctggtaatatgcagtatatgaggagtggtattgatgtgagt 20
Query: 908 ggata 912
|||||
Sbjct: 19 ggata 15
>gb|BM816138.1|BM816138 HC109B12_T3.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC109B12_T3.ab1 similar to (AF200528) cellulose
synthase-4 [Zea mays],(AF200529) cellulose synthase-5
[Zea mays],(AF200533) cellulose synthase-9 [Zea
mays],cellulose synthase catalytic subunit [Arabidopsis
thaliana],unnamed protein product [Arabidopsis
thaliana],, mRNA sequence
Length = 880
Score = 565 bits (285), Expect = e-159
Identities = 662/784 (84%), Gaps = 3/784 (0%)
Strand = Plus / Minus
Query: 312 cccacatcagggaaaagatcgacgcaaggaggatagcccagacaacgacaatggtcggcg 371
|||||| || ||| ||||| || || ||||||| ||||||||| | |||||| ||||| |
Sbjct: 812 cccacagcaaggagaagattgaagccaggaggacagcccagacgatgacaatcgtcggtg 753
Query: 372 tgcggttctgcttccccatgaggcccttgaggaaggggtacaggtggacaatcacccaga 431
||||||| ||| | ||||| || ||||||||||||||||| | ||| |||||||||||||
Sbjct: 752 tgcggttttgcntgcccataagacccttgaggaaggggtataagtgaacaatcacccaga 693
Query: 432 acgcaaagaagagcttcccgaaaagaggtccccatgactggtaaccgctattgattgcgt 491
| |||||||||||||||||||| || || ||||| || |||||||| || ||||| ||||
Sbjct: 692 aggcaaagaagagcttcccgaagagcggcccccaagattggtaaccactgttgatggcgt 633
Query: 492 aggaaatgccagcgaccacgccgaccaggttgatgatcaaaatagtggttggtgggatca 551
|||| | ||||| || || ||||||| ||| |||||||| || || || || ||||| |
Sbjct: 632 aggaggtaccagcaacgacaccgaccatgttaatgatcaagatggtcgtcggagggatga 573
Query: 552 gaagcgttgtccacttgaacatgtagagctcggcaaaatcaccttcttcgtcagtggcct 611
||||||| ||||||||||||||||||||||| ||||| || |||||||||||| | ||||
Sbjct: 572 gaagcgtcgtccacttgaacatgtagagctcagcaaagtcgccttcttcgtcattagcct 513
Query: 612 tagaggtgacagtgaagctcgtgtcgataccagcaagcaccttcaggagaccctggaaga 671
| ||||||||||||||| | ||||||||||| |||||||||||||| |||||||| ||||
Sbjct: 512 ttgaggtgacagtgaagttggtgtcgataccggcaagcaccttcagaagaccctgaaaga 453
Query: 672 cggcaaataaatgcgcagaaataccaccaatgacccagaactgctcgttcctccaccatt 731
||||||| | ||| ||||| ||||| ||||||||||||||||| || ||||||||||| |
Sbjct: 452 cggcaaacagatgggcagagatacctccaatgacccagaactgttcattcctccaccact 393
Query: 732 catcaatgccaacaccactccacctcatctcaaggataccagtggcaaagattgagataa 791
| |||||||||||||||||||||||||||||||||||||| |||||||| ||||| | |
Sbjct: 392 cgtcaatgccaacaccactccacctcatctcaaggataccggtggcaaaaattgaaagga 333
Query: 792 agagcgatataaaccaaacactctctaggttactaatctttgggatgatgaacttcccag 851
|||| | || ||||| | ||| | | ||| ||||||| ||| ||||||||||| ||||
Sbjct: 332 agagagcaatgaaccagatactggccaagttgctaatctctggcatgatgaactttccag 273
Query: 852 tgagaagacaaactgctggcaatatgcagtacaggaggagcgggattgatgtgagtggat 911
|||| | ||| | || |||||||| || || | || ||||||| || || ||||| |
Sbjct: 272 tgagcaaacagatagcaggcaatatacaatagactagaagcgggagagacgttagtgggt 213
Query: 912 aaattgttgtgttgatataagcaaatctctccaggaatttaagccgacctccatagccat 971
|||| || |||||||| ||||| |||||||||||||| || || || ||||| |||||||
Sbjct: 212 aaatggtggtgttgatgtaagcgaatctctccaggaacttgaggcgccctccgtagccat 153
Query: 972 accatatgggacaatgcctgctgaaaagaatttcaatggaaccaagagcccaccgaagca 1031
|||||| ||| ||||||| ||||||||||||||||| |||||||||||||||||| ||||
Sbjct: 152 accataaggggcaatgccggctgaaaagaatttcaacggaaccaagagcccaccggagca 93
Query: 1032 cttgattcaaacgatccgaaaggttgataggagcagatcccttgaaagctggtcgcttag 1091
| || |||| |||||| ||||| ||||| || |||||| ||||||||||||| |||||||
Sbjct: 92 c-tggttcagacgatctgaaagattgatgggggcagat-ccttgaaagctgg-cgcttag 36
Query: 1092 gcat 1095
||||
Sbjct: 35 gcat 32
>gb|BF624748.2|BF624748 HVSMEa0017K05f Hordeum vulgare seedling shoot EST library HVcDNA0001
(Cold stress) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEa0017K05f, mRNA sequence
Length = 750
Score = 555 bits (280), Expect = e-156
Identities = 454/512 (88%)
Strand = Plus / Minus
Query: 1547 tcataaccatataaggccgttctgttaaacacacaaccagttcccacataaactggccct 1606
||||||||||| | ||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 518 tcataaccatagatagccgttctgttgaaaacacaaccagttcccacataaactggccct 459
Query: 1607 tgaatgccatcaagacctctcaagttaatatcgaaaaacacagtgttcctgtttgcatat 1666
|||||||||||||| || |||||||||||||| ||||| |||||||||||||| ||||||
Sbjct: 458 tgaatgccatcaaggcccctcaagttaatatcaaaaaagacagtgttcctgttcgcatat 399
Query: 1667 cggtcattcctatcaataccatcaaacctctgaggaaattggacataacagacattcctt 1726
|| ||||||||||||||||||||||||||||| || || || ||||||||||| | |
Sbjct: 398 cgatcattcctatcaataccatcaaacctctgtgggaactgcacataacagacttgcgga 339
Query: 1727 cctaggtttgggtccataaggaagcacatagcttctcgaagagccttgctattattgatg 1786
||||||||||| ||||| ||||||||||||||||| || | ||||||||| || ||||||
Sbjct: 338 cctaggtttggatccattaggaagcacatagcttcccggacagccttgctgttgttgatg 279
Query: 1787 tagtggtcacagtcaagattcaacatgtattgcccattagtaaggacagctgatacacga 1846
||||| ||||| |||||||||||||||||||| ||||||||||||||||| || ||||||
Sbjct: 278 tagtgatcacaatcaagattcaacatgtattgtccattagtaaggacagccgagacacga 219
Query: 1847 acaagtgcattcatggcaccagccttcttgtgatgttggaatccaggacgtttttcacga 1906
||||| |||||||||||||||||||||||||| || |||||||||||||| |||||||||
Sbjct: 218 acaagggcattcatggcaccagccttcttgtggtgctggaatccaggacgcttttcacga 159
Query: 1907 gacacataaaccaaacgaggaagttcattgccttcaacgtcaagccctccactgtgaccc 1966
|||||||| |||||||| || || ||||| || || ||||| || |||||||||||
Sbjct: 158 gacacatagaccaaacgggggagctcattaccctcggtatcaaggccaccactgtgacca 99
Query: 1967 aggaaaacctgaatcattccaggatggtccctagtattgttcccaggccaaggtgtacca 2026
||||||||||||||||||||||| || ||||| |||||||| || ||||| ||||| |||
Sbjct: 98 aggaaaacctgaatcattccagggtgatccctggtattgtttcctggccatggtgtgcca 39
Query: 2027 tcttgcatgatccatccctcctcgggaacttt 2058
||||||||||||||||| |||||||| |||||
Sbjct: 38 tcttgcatgatccatccttcctcggggacttt 7
Score = 56.0 bits (28), Expect = 9e-006
Identities = 64/76 (84%)
Strand = Plus / Minus
Query: 1359 atttctcatcatcaaactgagaaccttcaatcccttcctctatatcttcgagattaaata 1418
||||||||||||||||| || |||||||| || || ||||| ||||| ||||| || |
Sbjct: 709 atttctcatcatcaaacccagcaccttcaacgccctcttctatgtcttcaagattgaaca 650
Query: 1419 ctggtacagaactgtc 1434
|||| |||||||||||
Sbjct: 649 ctggaacagaactgtc 634
>gb|CA020225.1|CA020225 HV14L03r HV Hordeum vulgare subsp. vulgare cDNA clone HV14L03
5-PRIME, mRNA sequence
Length = 582
Score = 553 bits (279), Expect = e-155
Identities = 405/447 (90%)
Strand = Plus / Minus
Query: 1547 tcataaccatataaggccgttctgttaaacacacaaccagttcccacataaactggccct 1606
|||||||||||||| || |||||||| |||||||||||||| |||||||||||||| |||
Sbjct: 457 tcataaccatataaagctgttctgttgaacacacaaccagtccccacataaactggtcct 398
Query: 1607 tgaatgccatcaagacctctcaagttaatatcgaaaaacacagtgttcctgtttgcatat 1666
||||||||||| ||||| |||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 397 tgaatgccatcgagacccctcaagttaatatcaaaaaacacggtgttcctgtttgcatat 338
Query: 1667 cggtcattcctatcaataccatcaaacctctgaggaaattggacataacagacattcctt 1726
| |||||| ||||||| ||||| |||||||||||||||||||||||||||| ||||||
Sbjct: 337 ctatcattcgtatcaatgccatcgaacctctgaggaaattggacataacagattttcctt 278
Query: 1727 cctaggtttgggtccataaggaagcacatagcttctcgaagagccttgctattattgatg 1786
||||| || ||||||||||| ||||||||||| |||| ||||| ||||||| ||||||
Sbjct: 277 cctagattagggtccataagaaagcacatagcctctcttagagcgctgctattgttgatg 218
Query: 1787 tagtggtcacagtcaagattcaacatgtattgcccattagtaaggacagctgatacacga 1846
||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 217 tagtgatcacaatcaagattcaacatgtactgcccattagtaaggacagctgatacacga 158
Query: 1847 acaagtgcattcatggcaccagccttcttgtgatgttggaatccaggacgtttttcacga 1906
||||||||||||||||||||||| |||||||| || ||||||||||||||||| ||||||
Sbjct: 157 acaagtgcattcatggcaccagctttcttgtggtgctggaatccaggacgtttctcacga 98
Query: 1907 gacacataaaccaaacgaggaagttcattgccttcaacgtcaagccctccactgtgaccc 1966
||||||||||||||||||||||| |||||||| ||| || || |||||||| |||||
Sbjct: 97 gacacataaaccaaacgaggaagctcattgccatcagtatcgaggcctccactatgacca 38
Query: 1967 aggaaaacctgaatcattccaggatgg 1993
||||||||||||| |||||||||||||
Sbjct: 37 aggaaaacctgaagcattccaggatgg 11
>gb|CK124710.1|CK124710 BES1824110c01 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010C0110 5-PRIME, mRNA sequence
Length = 710
Score = 547 bits (276), Expect = e-154
Identities = 453/512 (88%)
Strand = Plus / Minus
Query: 1547 tcataaccatataaggccgttctgttaaacacacaaccagttcccacataaactggccct 1606
||||||||||| | ||||||||||| || |||||||||||| |||||||||||||||||
Sbjct: 521 tcataaccatagatagccgttctgttgaaaacacaaccagtttccacataaactggccct 462
Query: 1607 tgaatgccatcaagacctctcaagttaatatcgaaaaacacagtgttcctgtttgcatat 1666
|||||||||||||| || |||||||||||||| ||||| |||||||||||||| ||||||
Sbjct: 461 tgaatgccatcaaggcccctcaagttaatatcaaaaaagacagtgttcctgttcgcatat 402
Query: 1667 cggtcattcctatcaataccatcaaacctctgaggaaattggacataacagacattcctt 1726
|| ||||||||||||||||||||||||||||| || || || ||||||||||| | |
Sbjct: 401 cgatcattcctatcaataccatcaaacctctgtgggaactgcacataacagacttgcgga 342
Query: 1727 cctaggtttgggtccataaggaagcacatagcttctcgaagagccttgctattattgatg 1786
||||||||||| ||||| ||||||||||||||||| || | ||||||||| || ||||||
Sbjct: 341 cctaggtttggatccattaggaagcacatagcttcccggacagccttgctgttgttgatg 282
Query: 1787 tagtggtcacagtcaagattcaacatgtattgcccattagtaaggacagctgatacacga 1846
||||| ||||| |||||||||||||||||||| ||||||||||||||||| || ||||||
Sbjct: 281 tagtgatcacaatcaagattcaacatgtattgtccattagtaaggacagccgagacacga 222
Query: 1847 acaagtgcattcatggcaccagccttcttgtgatgttggaatccaggacgtttttcacga 1906
||||| |||||||||||||||||||||||||| || |||||||||||||| |||||||||
Sbjct: 221 acaagggcattcatggcaccagccttcttgtggtgctggaatccaggacgcttttcacga 162
Query: 1907 gacacataaaccaaacgaggaagttcattgccttcaacgtcaagccctccactgtgaccc 1966
|||||||| |||||||| || || ||||| || || ||||| || |||||||||||
Sbjct: 161 gacacatagaccaaacgggggagctcattaccctcggtatcaaggccaccactgtgacca 102
Query: 1967 aggaaaacctgaatcattccaggatggtccctagtattgttcccaggccaaggtgtacca 2026
||||||||||||||||||||||| || ||||| |||||||| || ||||| ||||| |||
Sbjct: 101 aggaaaacctgaatcattccagggtgatccctggtattgtttcctggccatggtgtgcca 42
Query: 2027 tcttgcatgatccatccctcctcgggaacttt 2058
||||||||||||||||| |||||||| |||||
Sbjct: 41 tcttgcatgatccatccttcctcggggacttt 10
>gb|BU989992.1|BU989992 HF23J07r HF Hordeum vulgare subsp. vulgare cDNA clone HF23J07
5-PRIME, mRNA sequence
Length = 480
Score = 543 bits (274), Expect = e-152
Identities = 421/470 (89%)
Strand = Plus / Minus
Query: 856 aagacaaactgctggcaatatgcagtacaggaggagcgggattgatgtgagtggataaat 915
||||||||| ||||| ||||||||||| | |||||| || ||||||||||||||||| ||
Sbjct: 480 aagacaaacagctggtaatatgcagtatatgaggagtggtattgatgtgagtggatagat 421
Query: 916 tgttgtgttgatataagcaaatctctccaggaatttaagccgacctccatagccatacca 975
|| |||||||| ||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 420 agtggtgttgatgtaagcaaatctctccaggaatttaagccgtccgccatagccatacca 361
Query: 976 tatgggacaatgcctgctgaaaagaatttcaatggaaccaagagcccaccgaagcacttg 1035
||||||||||||||| |||||||||||||| | |||||||| |||||||||||||||||
Sbjct: 360 tatgggacaatgcctactgaaaagaatttccactgaaccaagcgcccaccgaagcacttg 301
Query: 1036 attcaaacgatccgaaaggttgataggagcagatcccttgaaagctggtcgcttaggcat 1095
||||| |||||| |||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 300 attcagacgatctgaaaggttgataggggcagagcccttgaaagctggtcgcttaggcat 241
Query: 1096 gcagtagattgatcgccagcctcgagcatgcatcttgaatccggtgagaatgtcttctgt 1155
||||||||||| |||||||| || |||||||||||||| || || ||||| ||||| ||
Sbjct: 240 acagtagattgaccgccagccacgtgcatgcatcttgaacccagtaagaatatcttccgt 181
Query: 1156 aacagaaccatagatccacccaatctcagttccccagtcagttttgtcctcatagccaca 1215
||||||||| |||||||| |||||||| ||||||| ||| || ||||||||| |||||
Sbjct: 180 aacagaaccgtagatccagccaatctcccttccccaatcacttcggtcctcataaccaca 121
Query: 1216 gctgatgacatgaatagcttctttcagaagagactctggagttgcagattgtggaacacc 1275
||| |||||||| || |||||||||||||||||||||||||||||||| || || |||||
Sbjct: 120 gctaatgacatggattgcttctttcagaagagactctggagttgcagactgaggcacacc 61
Query: 1276 gccatattccatcagagtagaggctacaaaaacactggactggccaaatc 1325
||||||||||||||||| |||||||| ||||||||||| ||||||||||
Sbjct: 60 accatattccatcagagtggaggctacgaaaacactggattggccaaatc 11
>gb|BQ468619.1|BQ468619 HM01M13T HM Hordeum vulgare subsp. vulgare cDNA clone HM01M13
5-PRIME, mRNA sequence
Length = 653
Score = 529 bits (267), Expect = e-148
Identities = 519/603 (86%)
Strand = Plus / Minus
Query: 242 tcctagcagttgatgccacatttcgcgatatcaggaccagtgacccgggtggtgaatgga 301
|||||||||||||||||||| | |||||| || |||||||| || |||||||| ||
Sbjct: 613 tcctagcagttgatgccacacatttggatatctggcccagtgactcgtgtggtgaacggg 554
Query: 302 tcgatacgaacccacatcagggaaaagatcgacgcaaggaggatagcccagacaacgaca 361
||||| |||||||||| || ||| ||||| | ||||| ||||| |||||||| || ||
Sbjct: 553 tcgatgcgaacccacagcaaggagaagatgtatgcaagaaggatggcccagacgacaacg 494
Query: 362 atggtcggcgtgcggttctgcttccccatgaggcccttgaggaaggggtacaggtggaca 421
||||||||||||||||||||| ||||| || ||||||||||| ||||||| ||||| |
Sbjct: 493 atggtcggcgtgcggttctgccgtcccattagccccttgaggaatgggtacaagtggata 434
Query: 422 atcacccagaacgcaaagaagagcttcccgaaaagaggtccccatgactggtaaccgcta 481
||||||||||| ||||||||||||||||||||||| |||||||||||||| || |||||
Sbjct: 433 atcacccagaaggcaaagaagagcttcccgaaaagcggtccccatgactgatagccgctg 374
Query: 482 ttgattgcgtaggaaatgccagcgaccacgccgaccaggttgatgatcaaaatagtggtt 541
||||| |||||||| | ||||| || || ||||| |||||||||||||| ||||| |||
Sbjct: 373 ttgatcgcgtaggaggtaccagccacaacaccgacaaggttgatgatcaagatagttgtt 314
Query: 542 ggtgggatcagaagcgttgtccacttgaacatgtagagctcggcaaaatcaccttcttcg 601
|||||||||||||| || ||||||||||||||||||||||||||||||||| ||||||
Sbjct: 313 ggtgggatcagaagagtcgtccacttgaacatgtagagctcggcaaaatcattatcttcg 254
Query: 602 tcagtggccttagaggtgacagtgaagctcgtgtcgataccagcaagcaccttcaggaga 661
|| | || || || |||||||||||||| |||||||| |||||||| ||||||||||||
Sbjct: 253 tcggatgcttttgaagtgacagtgaagctggtgtcgatgccagcaagtaccttcaggaga 194
Query: 662 ccctggaagacggcaaataaatgcgcagaaataccaccaatgacccagaactgctcgttc 721
|| |||||||| ||||| | ||| ||||||||||| || |||||||||||||| || |||
Sbjct: 193 ccttggaagacagcaaacagatgtgcagaaatacctccgatgacccagaactgttcattc 134
Query: 722 ctccaccattcatcaatgccaacaccactccacctcatctcaaggataccagtggcaaag 781
|||||||| || || ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 133 ctccaccactcgtcgatgccaacaccgctccacctcatctcaaggataccagtggcaaag 74
Query: 782 attgagataaagagcgatataaaccaaacactctctaggttactaatctttgggatgatg 841
|| || |||||||| || |||||||||| ||| | | ||| ||||||| ||||||||||
Sbjct: 73 atcgaaataaagagagagataaaccaaatactggcaatgttgctaatctgtgggatgatg 14
Query: 842 aac 844
|||
Sbjct: 13 aac 11
>gb|BG417165.1|BG417165 HVSMEk0016J06f Hordeum vulgare testa/pericarp EST library HVcDNA0013
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEk0016J06f, mRNA sequence
Length = 475
Score = 500 bits (252), Expect = e-139
Identities = 413/467 (88%)
Strand = Plus / Minus
Query: 641 ccagcaagcaccttcaggagaccctggaagacggcaaataaatgcgcagaaataccacca 700
|||||||| |||||||| ||||| || ||||| ||||| | ||| ||||||||||| ||
Sbjct: 469 ccagcaagtaccttcagaagaccttgaaagacagcaaacagatgtgcagaaatacctccg 410
Query: 701 atgacccagaactgctcgttcctccaccattcatcaatgccaacaccactccacctcatc 760
|||||||||||||| || ||||||||||| || || |||||||||| |||||| ||||
Sbjct: 409 atgacccagaactgttcattcctccaccactcgtcgatgccaacacngctccacttcatt 350
Query: 761 tcaaggataccagtggcaaagattgagataaagagcgatataaaccaaacactctctagg 820
||||||||||||||||||||||| || |||||||| || |||||||||| ||| | | |
Sbjct: 349 tcaaggataccagtggcaaagatcgaaataaagagagagataaaccaaatactggcaatg 290
Query: 821 ttactaatctttgggatgatgaacttcccagtgagaagacaaactgctggcaatatgcag 880
|| ||||||| ||||||||||||||| || |||||||||||||| ||||| |||||||||
Sbjct: 289 ttgctaatctgtgggatgatgaactttcccgtgagaagacaaacagctggtaatatgcag 230
Query: 881 tacaggaggagcgggattgatgtgagtggataaattgttgtgttgatataagcaaatctc 940
|| | |||||| || ||||||||||||||||| || || |||||||| ||||||||||||
Sbjct: 229 tatatgaggagtggtattgatgtgagtggatagatagtggtgttgatgtaagcaaatctc 170
Query: 941 tccaggaatttaagccgacctccatagccataccatatgggacaatgcctgctgaaaaga 1000
||||||||||||||||| || ||||||||||||||||||||||||||||| |||||||||
Sbjct: 169 tccaggaatttaagccgtccgccatagccataccatatgggacaatgcctactgaaaaga 110
Query: 1001 atttcaatggaaccaagagcccaccgaagcacttgattcaaacgatccgaaaggttgata 1060
||||| | |||||||| |||||||||||||||||||||| |||||| ||||||||||||
Sbjct: 109 atttccactgaaccaagcgcccaccgaagcacttgattcagacgatctgaaaggttgata 50
Query: 1061 ggagcagatcccttgaaagctggtcgcttaggcatgcagtagattga 1107
|| ||||| |||||||||||||||||||||||||| |||||||||||
Sbjct: 49 ggggcagagcccttgaaagctggtcgcttaggcatacagtagattga 3
>gb|AV932043.1|AV932043 AV932043 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal2a04 5', mRNA sequence
Length = 615
Score = 498 bits (251), Expect = e-139
Identities = 512/599 (85%)
Strand = Plus / Minus
Query: 650 accttcaggagaccctggaagacggcaaataaatgcgcagaaataccaccaatgacccag 709
|||||||| |||||||| ||||||||||| | ||| ||||| ||||| ||||||||||||
Sbjct: 615 accttcagaagaccctgaaagacggcaaacagatgggcagagatacctccaatgacccag 556
Query: 710 aactgctcgttcctccaccattcatcaatgccaacaccactccacctcatctcaaggata 769
||||| || ||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 555 aactgttcattcctccaccactcgtcaatgccaacaccactccacctcatctcaaggata 496
Query: 770 ccagtggcaaagattgagataaagagcgatataaaccaaacactctctaggttactaatc 829
|| |||||||| ||||| | ||||| | || ||||| | ||| | | ||| ||||||
Sbjct: 495 ccggtggcaaaaattgaaaggaagagagcaatgaaccagatactggccaagttgctaatc 436
Query: 830 tttgggatgatgaacttcccagtgagaagacaaactgctggcaatatgcagtacaggagg 889
| ||| ||||||||||| |||||||| | ||| | || |||||||| || || | ||
Sbjct: 435 tctggcatgatgaactttccagtgagcaaacagatagcaggcaatatacaatagactaga 376
Query: 890 agcgggattgatgtgagtggataaattgttgtgttgatataagcaaatctctccaggaat 949
||||||| || || ||||| ||||| || |||||||| ||||| ||||||||||||||
Sbjct: 375 agcgggagagacgttagtgggtaaatggtggtgttgatgtaagcgaatctctccaggaac 316
Query: 950 ttaagccgacctccatagccataccatatgggacaatgcctgctgaaaagaatttcaatg 1009
|| || || ||||| ||||||||||||| ||| ||||||| ||||||||||||||||| |
Sbjct: 315 ttgaggcgccctccgtagccataccataaggggcaatgccggctgaaaagaatttcaacg 256
Query: 1010 gaaccaagagcccaccgaagcacttgattcaaacgatccgaaaggttgataggagcagat 1069
||||||||||||||||| |||||||| |||| |||||| ||||| ||||| || ||||||
Sbjct: 255 gaaccaagagcccaccggagcacttggttcagacgatctgaaagattgatgggggcagat 196
Query: 1070 cccttgaaagctggtcgcttaggcatgcagtagattgatcgccagcctcgagcatgcatc 1129
|||||||||||||| |||||||||||||| |||| ||| |||||||||| || ||||||
Sbjct: 195 cccttgaaagctgggcgcttaggcatgcaatagactgaccgccagcctcttgcgtgcatc 136
Query: 1130 ttgaatccggtgagaatgtcttctgtaacagaaccatagatccacccaatctcagttccc 1189
|||||||| |||||||| |||||||| ||||| ||||| ||||| |||||||||||||||
Sbjct: 135 ttgaatccagtgagaatatcttctgtgacagatccataaatccaaccaatctcagttccc 76
Query: 1190 cagtcagttttgtcctcatagccacagctgatgacatgaatagcttctttcagaagaga 1248
|| |||| ||||||||||||||||| || |||||||| ||||||||||||| ||||||
Sbjct: 75 cactcagacttgtcctcatagccacaacttatgacatggatagcttctttcaaaagaga 17
>gb|AV836682.1|AV836682 AV836682 K. Sato unpublished cDNA library: Hordeum vulgare subsp.
vulgare seedling leaves second leaf stage Hordeum vulgare
subsp. vulgare cDNA clone basd24c20, mRNA sequence
Length = 505
Score = 480 bits (242), Expect = e-133
Identities = 401/454 (88%)
Strand = Plus / Minus
Query: 1605 cttgaatgccatcaagacctctcaagttaatatcgaaaaacacagtgttcctgtttgcat 1664
|||||||||||||||| || |||||||||||||| ||||| |||||||||||||| ||||
Sbjct: 505 cttgaatgccatcaaggcccctcaagttaatatcaaaaaagacagtgttcctgttcgcat 446
Query: 1665 atcggtcattcctatcaataccatcaaacctctgaggaaattggacataacagacattcc 1724
|||| ||||||||||||||||||||||||||||| || || || ||||||||||| | |
Sbjct: 445 atcgatcattcctatcaataccatcaaacctctgtgggaactgcacataacagacttgcg 386
Query: 1725 ttcctaggtttgggtccataaggaagcacatagcttctcgaagagccttgctattattga 1784
||||||||||| ||||| ||||||||||||||||| || | ||||||||| || ||||
Sbjct: 385 gacctaggtttggatccattaggaagcacatagcttcccggacagccttgctgttgttga 326
Query: 1785 tgtagtggtcacagtcaagattcaacatgtattgcccattagtaaggacagctgatacac 1844
||||||| ||||| |||||||||||||||||||| ||||||||||||||||| || ||||
Sbjct: 325 tgtagtgatcacaatcaagattcaacatgtattgtccattagtaaggacagccgagacac 266
Query: 1845 gaacaagtgcattcatggcaccagccttcttgtgatgttggaatccaggacgtttttcac 1904
||||||| |||||||||||||||||||||||||| || |||||||||||||| |||||||
Sbjct: 265 gaacaagggcattcatggcaccagccttcttgtggtgctggaatccaggacgcttttcac 206
Query: 1905 gagacacataaaccaaacgaggaagttcattgccttcaacgtcaagccctccactgtgac 1964
|||||||||| |||||||| || || ||||| || || ||||| || ||||||||||
Sbjct: 205 gagacacatagaccaaacgggggagctcattaccctcggtatcaaggccaccactgtgac 146
Query: 1965 ccaggaaaacctgaatcattccaggatggtccctagtattgttcccaggccaaggtgtac 2024
| ||||||||||||||||||||||| || ||||| |||||||| || ||||| ||||| |
Sbjct: 145 caaggaaaacctgaatcattccagggtgatccctggtattgtttcctggccatggtgtgc 86
Query: 2025 catcttgcatgatccatccctcctcgggaacttt 2058
||||||||||||||||||| |||||||| |||||
Sbjct: 85 catcttgcatgatccatccttcctcggggacttt 52
>gb|CB882206.1|CB882206 HL01D01w HL Hordeum vulgare subsp. vulgare cDNA clone HL01D01
3-PRIME, mRNA sequence
Length = 700
Score = 472 bits (238), Expect = e-131
Identities = 495/580 (85%), Gaps = 3/580 (0%)
Strand = Plus / Minus
Query: 2306 acatagcaagataccttgtcaaccggataatcgacagcaaggatggaaagcacagtattt 2365
||||||||||| |||||||| || |||||||| |||||||| ||||| ||||| || ||
Sbjct: 693 acatagcaagagaccttgtccacgggataatcaacagcaagaatggatagcacggtgttg 634
Query: 2366 gcagtgacaagaggaggctccttcataggatccacagtactgacaaagatatcaacagga 2425
|||||||| | ||| |||||||||| || || || |||||||| || || ||||||| |
Sbjct: 633 gcagtgacgataggtggctccttcaaggggtcgactgtactgacgaatatgtcaacagca 574
Query: 2426 gctaattgagatggttcaccttctcggtcataccttaaagccagtctatcaaggtatgtt 2485
|| || ||||| |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 573 gccaactgagagggttcaccttctcggtcataccttaaagccagtctatcaaggtaggtc 514
Query: 2486 tcacggttgattggggaccactttgggaactgatccaaaatccaggacaaagcaaaccag 2545
|| ||||||||||| ||||||| ||||||||||||| |||||||| |||||||||||
Sbjct: 513 tcccggttgattggaaaccacttcgggaactgatccagtatccaggataaagcaaaccaa 454
Query: 2546 atctcacatatgacggataaaagccacagtggatatgcattgttcacaggatgtgtgata 2605
||||||||||| || |||||||||||||| || |||||||| |||||||| ||||| |
Sbjct: 453 atctcacatataacagataaaagccacagcgggtatgcattacgcacaggatttgtgaga 394
Query: 2606 cggtagcgcaagaatatgcatagaacagccaaacgtagcacaatgaccattctgtacgga 2665
|||||| ||| ||| |||| ||||||| |||| || || |||||||||||||||||||||
Sbjct: 393 cggtagtgcaggaagatgcttagaacaaccaaccgcagaacaatgaccattctgtacgga 334
Query: 2666 tttattctggatgaaggaattggcacttttctagatagaggttgccgagtttcatcattc 2725
|||||| ||||||||| ||| || || |||||||||||||| || |||||||||||||||
Sbjct: 333 tttattttggatgaagcaatggggacctttctagatagaggctggcgagtttcatcattc 274
Query: 2726 agtaaggcatcttccatgttataatcagtagaagcatcaatatcagcaactccacgccct 2785
||||| || ||||||||||| || |||||||| ||||| || |||| | || | || |||
Sbjct: 273 agtaaagcgtcttccatgttgtattcagtagatgcatcgatgtcagtagctgcccgacct 214
Query: 2786 tctgatggagcaatgcttgttccattggtcataggaattgcacctttatc---cttcatt 2842
|| || |||||||||||||| ||||| ||||| ||||||||||| || || |||||||
Sbjct: 213 tcagagggagcaatgcttgtgccattagtcatgggaattgcacccttgtcctgcttcatt 154
Query: 2843 ttccatccatccaccctctctttccatgcaacattgccaa 2882
||||| ||||| || ||||||||||| |||||||| ||||
Sbjct: 153 ttccagccatcaactctctctttccaagcaacattcccaa 114
Score = 42.1 bits (21), Expect = 0.13
Identities = 41/47 (87%), Gaps = 3/47 (6%)
Strand = Plus / Minus
Query: 2954 atgttcccaacaggagacatcat---atgatcaggggaagctccagg 2997
||||||||| ||| |||||||| |||||||||||||||||||||
Sbjct: 50 atgttcccagtaggggacatcatatgatgatcaggggaagctccagg 4
>gb|CB876338.1|CB876338 HX10P19w HX Hordeum vulgare subsp. vulgare cDNA clone HX10P19
3-PRIME, mRNA sequence
Length = 616
Score = 470 bits (237), Expect = e-130
Identities = 453/525 (86%)
Strand = Plus / Plus
Query: 242 tcctagcagttgatgccacatttcgcgatatcaggaccagtgacccgggtggtgaatgga 301
|||||||||||||||||||| | |||||| || |||||||| || |||||||| ||
Sbjct: 92 tcctagcagttgatgccacacatttggatatctggcccagtgactcgtgtggtgaacggg 151
Query: 302 tcgatacgaacccacatcagggaaaagatcgacgcaaggaggatagcccagacaacgaca 361
||||| |||||||||| || ||| ||||| || ||||| ||||| |||||||| || ||
Sbjct: 152 tcgatgcgaacccacagcaaggagaagatggatgcaagaaggatggcccagacgacaacg 211
Query: 362 atggtcggcgtgcggttctgcttccccatgaggcccttgaggaaggggtacaggtggaca 421
||||||||||||||||||||| ||||| || ||||||||||| ||||||| ||||| |
Sbjct: 212 atggtcggcgtgcggttctgccgtcccattagccccttgaggaatgggtacaagtggata 271
Query: 422 atcacccagaacgcaaagaagagcttcccgaaaagaggtccccatgactggtaaccgcta 481
||||||||||| ||||||||||||||||||||||| |||||||||||||| || |||||
Sbjct: 272 atcacccagaaggcaaagaagagcttcccgaaaagcggtccccatgactgatagccgctg 331
Query: 482 ttgattgcgtaggaaatgccagcgaccacgccgaccaggttgatgatcaaaatagtggtt 541
||||| |||||||| | ||||| || || ||||| |||||||||||||| ||||| |||
Sbjct: 332 ttgatcgcgtaggaggtaccagccacaacaccgacaaggttgatgatcaagatagttgtt 391
Query: 542 ggtgggatcagaagcgttgtccacttgaacatgtagagctcggcaaaatcaccttcttcg 601
|||||||||||||| || ||||||||||||||||||||||||||||||||| ||||||
Sbjct: 392 ggtgggatcagaagagtcgtccacttgaacatgtagagctcggcaaaatcattatcttcg 451
Query: 602 tcagtggccttagaggtgacagtgaagctcgtgtcgataccagcaagcaccttcaggaga 661
|| | || || || |||||||||||||| |||||||| |||||||| ||||||||||||
Sbjct: 452 tcggatgcttttgaagtgacagtgaagctggtgtcgatgccagcaagtaccttcaggaga 511
Query: 662 ccctggaagacggcaaataaatgcgcagaaataccaccaatgacccagaactgctcgttc 721
|| |||||||| ||||| | ||| ||||||||||| || |||||||||||||| || |||
Sbjct: 512 ccttggaagacagcaaacagatgtgcagaaatacctccgatgacccagaactgttcattc 571
Query: 722 ctccaccattcatcaatgccaacaccactccacctcatctcaagg 766
|||||||| || || ||||||||||| ||||||||||||||||||
Sbjct: 572 ctccaccactcgtcgatgccaacaccgctccacctcatctcaagg 616
>gb|BI776485.2|BI776485 EBpi05_SQ001_J01_R pistil, 8 DPA, no treatment, cv Optic, EBpi05
Hordeum vulgare subsp. vulgare cDNA clone
EBpi05_SQ001_J01 5', mRNA sequence
Length = 518
Score = 456 bits (230), Expect = e-126
Identities = 446/518 (86%)
Strand = Plus / Minus
Query: 248 cagttgatgccacatttcgcgatatcaggaccagtgacccgggtggtgaatggatcgata 307
|||||||||||||| | |||||| || |||||||| || |||||||| || |||||
Sbjct: 518 cagttgatgccacacatttggatatctggcccagtgactcgtgtggtgaacgggtcgatg 459
Query: 308 cgaacccacatcagggaaaagatcgacgcaaggaggatagcccagacaacgacaatggtc 367
|||||||||| || ||| ||||| || ||||| ||||| |||||||| || || ||||||
Sbjct: 458 cgaacccacagcaaggagaagatggatgcaagaaggatggcccagacgacaacgatggtc 399
Query: 368 ggcgtgcggttctgcttccccatgaggcccttgaggaaggggtacaggtggacaatcacc 427
||||||||||||||| ||||| || ||||||||||| ||||||| ||||| |||||||
Sbjct: 398 ggcgtgcggttctgccgtcccattagccccttgaggaatgggtacaagtggataatcacc 339
Query: 428 cagaacgcaaagaagagcttcccgaaaagaggtccccatgactggtaaccgctattgatt 487
||||| ||||||||||||||||||||||| |||||||||||||| || ||||| |||||
Sbjct: 338 cagaaggcaaagaagagcttcccgaaaagcggtccccatgactgatagccgctgttgatc 279
Query: 488 gcgtaggaaatgccagcgaccacgccgaccaggttgatgatcaaaatagtggttggtggg 547
|||||||| | ||||| || || ||||| |||||||||||||| ||||| |||||||||
Sbjct: 278 gcgtaggaggtaccagccacaacaccgacaaggttgatgatcaagatagttgttggtggg 219
Query: 548 atcagaagcgttgtccacttgaacatgtagagctcggcaaaatcaccttcttcgtcagtg 607
|||||||| || ||||||||||||||||||||||||||||||||| |||||||| |
Sbjct: 218 atcagaagagtcgtccacttgaacatgtagagctcggcaaaatcattatcttcgtcggat 159
Query: 608 gccttagaggtgacagtgaagctcgtgtcgataccagcaagcaccttcaggagaccctgg 667
|| || || |||||||||||||| |||||||| |||||||| |||||||||||||| |||
Sbjct: 158 gcttttgaagtgacagtgaagctggtgtcgatgccagcaagtaccttcaggagaccttgg 99
Query: 668 aagacggcaaataaatgcgcagaaataccaccaatgacccagaactgctcgttcctccac 727
||||| ||||| | ||| ||||||||||| || |||||||||||||| || |||||||||
Sbjct: 98 aagacagcaaacagatgtgcagaaatacctccgatgacccagaactgttcattcctccac 39
Query: 728 cattcatcaatgccaacaccactccacctcatctcaag 765
|| || || ||||||||||| |||||||||||||||||
Sbjct: 38 cactcgtcgatgccaacaccgctccacctcatctcaag 1
>gb|AV914933.1|AV914933 AV914933 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags9b06 5', mRNA sequence
Length = 654
Score = 450 bits (227), Expect = e-124
Identities = 479/563 (85%)
Strand = Plus / Minus
Query: 293 gtgaatggatcgatacgaacccacatcagggaaaagatcgacgcaaggaggatagcccag 352
||||||||||| | ||||||||||| || ||| ||||| || || ||||||| |||||||
Sbjct: 633 gtgaatggatcaacacgaacccacagcaaggagaagattgaagccaggaggacagcccag 574
Query: 353 acaacgacaatggtcggcgtgcggttctgcttccccatgaggcccttgaggaaggggtac 412
|| | |||||| ||||| |||||||| ||| | ||||| || |||||||||||||||||
Sbjct: 573 acgatgacaatcgtcggtgtgcggttttgcctgcccataagacccttgaggaaggggtat 514
Query: 413 aggtggacaatcacccagaacgcaaagaagagcttcccgaaaagaggtccccatgactgg 472
| ||| |||||||||||||| |||||||||||||||||||| || || ||||| || |||
Sbjct: 513 aagtgaacaatcacccagaaggcaaagaagagcttcccgaagagcggcccccaagattgg 454
Query: 473 taaccgctattgattgcgtaggaaatgccagcgaccacgccgaccaggttgatgatcaaa 532
||||| || ||||| |||||||| | ||||| || || ||||||| ||| ||||||||
Sbjct: 453 taaccactgttgatggcgtaggaggtaccagcaacgacaccgaccatgttaatgatcaag 394
Query: 533 atagtggttggtgggatcagaagcgttgtccacttgaacatgtagagctcggcaaaatca 592
|| || || || ||||| |||||||| ||||||||||||||||||||||| ||||| ||
Sbjct: 393 atggtcgtcggagggatgagaagcgtcgtccacttgaacatgtagagctcagcaaagtcg 334
Query: 593 ccttcttcgtcagtggccttagaggtgacagtgaagctcgtgtcgataccagcaagcacc 652
|||||||||||| | ||||| ||||||||||||||| | ||||||||||| |||||||||
Sbjct: 333 ccttcttcgtcattagcctttgaggtgacagtgaagttggtgtcgataccggcaagcacc 274
Query: 653 ttcaggagaccctggaagacggcaaataaatgcgcagaaataccaccaatgacccagaac 712
||||| |||||||| ||||||||||| | ||| ||||| ||||| |||||||||||||||
Sbjct: 273 ttcagaagaccctgaaagacggcaaacagatgggcagagatacctccaatgacccagaac 214
Query: 713 tgctcgttcctccaccattcatcaatgccaacaccactccacctcatctcaaggatacca 772
|| || ||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 213 tgttcattcctccaccactcgtcaatgccaacaccactccacctcatctcaaggataccg 154
Query: 773 gtggcaaagattgagataaagagcgatataaaccaaacactctctaggttactaatcttt 832
|||||||| ||||| | ||||| | || ||||| | ||| | | ||| ||||||| |
Sbjct: 153 gtggcaaaaattgaaaggaagagagcaatgaaccagatactggccaagttgctaatctct 94
Query: 833 gggatgatgaacttcccagtgag 855
|| ||||||||||| ||||||||
Sbjct: 93 ggcatgatgaactttccagtgag 71
>gb|AV925215.1|AV925215 AV925215 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd22e04 5', mRNA sequence
Length = 656
Score = 448 bits (226), Expect = e-124
Identities = 427/494 (86%)
Strand = Plus / Minus
Query: 293 gtgaatggatcgatacgaacccacatcagggaaaagatcgacgcaaggaggatagcccag 352
||||||||||| | ||||||||||| || ||| ||||| || || ||||||| |||||||
Sbjct: 640 gtgaatggatcaacacgaacccacagcaaggagaagattgaagccaggaggacagcccag 581
Query: 353 acaacgacaatggtcggcgtgcggttctgcttccccatgaggcccttgaggaaggggtac 412
|| | |||||| ||||| |||||||| ||| | ||||| || |||||||||||||||||
Sbjct: 580 acgatgacaatcgtcggtgtgcggttttgcctgcccataagacccttgaggaaggggtat 521
Query: 413 aggtggacaatcacccagaacgcaaagaagagcttcccgaaaagaggtccccatgactgg 472
| ||| |||||||||||||| |||||||||||||||||||| || || ||||| || |||
Sbjct: 520 aagtgaacaatcacccagaaggcaaagaagagcttcccgaagagcggcccccaagattgg 461
Query: 473 taaccgctattgattgcgtaggaaatgccagcgaccacgccgaccaggttgatgatcaaa 532
||||| || ||||| |||||||| | ||||| || || ||||||| ||| ||||||||
Sbjct: 460 taaccactgttgatggcgtaggaggtaccagcaacgacaccgaccatgttaatgatcaag 401
Query: 533 atagtggttggtgggatcagaagcgttgtccacttgaacatgtagagctcggcaaaatca 592
|| || || || ||||| |||||||| ||||||||||||||||||||||| ||||| ||
Sbjct: 400 atggtcgtcggagggatgagaagcgtcgtccacttgaacatgtagagctcagcaaagtcg 341
Query: 593 ccttcttcgtcagtggccttagaggtgacagtgaagctcgtgtcgataccagcaagcacc 652
|||||||||||| | ||||| ||||||||||||||| | ||||||||||| |||||||||
Sbjct: 340 ccttcttcgtcattagcctttgaggtgacagtgaagttggtgtcgataccggcaagcacc 281
Query: 653 ttcaggagaccctggaagacggcaaataaatgcgcagaaataccaccaatgacccagaac 712
||||| |||||||| ||||||||||| | ||| ||||| ||||| |||||||||||||||
Sbjct: 280 ttcagaagaccctgaaagacggcaaacagatgggcagagatacctccaatgacccagaac 221
Query: 713 tgctcgttcctccaccattcatcaatgccaacaccactccacctcatctcaaggatacca 772
|| || ||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 220 tgttcattcctccaccactcgtcaatgccaacaccactccacctcatctcaaggataccg 161
Query: 773 gtggcaaagattga 786
|||||||| |||||
Sbjct: 160 gtggcaaaaattga 147
>gb|BM816139.1|BM816139 HC105G09_T3.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC105G09_T3.ab1 similar to (AF200528) cellulose
synthase-4 [Zea mays],(AF200529) cellulose synthase-5
[Zea mays],(AF200533) cellulose synthase-9 [Zea
mays],cellulose synthase catalytic subunit [Arabidopsis
thaliana],unnamed protein product [Arabidopsis
thaliana],, mRNA sequence
Length = 916
Score = 448 bits (226), Expect = e-124
Identities = 427/494 (86%)
Strand = Plus / Minus
Query: 293 gtgaatggatcgatacgaacccacatcagggaaaagatcgacgcaaggaggatagcccag 352
||||||||||| | ||||||||||| || ||| ||||| || || ||||||| |||||||
Sbjct: 593 gtgaatggatcaacacgaacccacagcaaggagaagattgaagccaggaggacagcccag 534
Query: 353 acaacgacaatggtcggcgtgcggttctgcttccccatgaggcccttgaggaaggggtac 412
|| | |||||| ||||| |||||||| ||| | ||||| || |||||||||||||||||
Sbjct: 533 acgatgacaatcgtcggtgtgcggttttgcctgcccataagacccttgaggaaggggtat 474
Query: 413 aggtggacaatcacccagaacgcaaagaagagcttcccgaaaagaggtccccatgactgg 472
| ||| |||||||||||||| |||||||||||||||||||| || || ||||| || |||
Sbjct: 473 aagtgaacaatcacccagaaggcaaagaagagcttcccgaagagcggcccccaagattgg 414
Query: 473 taaccgctattgattgcgtaggaaatgccagcgaccacgccgaccaggttgatgatcaaa 532
||||| || ||||| |||||||| | ||||| || || ||||||| ||| ||||||||
Sbjct: 413 taaccactgttgatggcgtaggaggtaccagcaacgacaccgaccatgttaatgatcaag 354
Query: 533 atagtggttggtgggatcagaagcgttgtccacttgaacatgtagagctcggcaaaatca 592
|| || || || ||||| |||||||| ||||||||||||||||||||||| ||||| ||
Sbjct: 353 atggtcgtcggagggatgagaagcgtcgtccacttgaacatgtagagctcagcaaagtcg 294
Query: 593 ccttcttcgtcagtggccttagaggtgacagtgaagctcgtgtcgataccagcaagcacc 652
|||||||||||| | ||||| ||||||||||||||| | ||||||||||| |||||||||
Sbjct: 293 ccttcttcgtcattagcctttgaggtgacagtgaagttggtgtcgataccggcaagcacc 234
Query: 653 ttcaggagaccctggaagacggcaaataaatgcgcagaaataccaccaatgacccagaac 712
||||| |||||||| ||||||||||| | ||| ||||| ||||| |||||||||||||||
Sbjct: 233 ttcagaagaccctgaaagacggcaaacagatgggcagagatacctccaatgacccagaac 174
Query: 713 tgctcgttcctccaccattcatcaatgccaacaccactccacctcatctcaaggatacca 772
|| || ||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 173 tgttcattcctccaccactcgtcaatgccaacaccactccacctcatctcaaggataccg 114
Query: 773 gtggcaaagattga 786
|||||||| |||||
Sbjct: 113 gtggcaaaaattga 100
>gb|BQ463573.1|BQ463573 HI05L24r HI Hordeum vulgare subsp. vulgare cDNA clone HI05L24
5-PRIME, mRNA sequence
Length = 591
Score = 438 bits (221), Expect = e-121
Identities = 457/536 (85%)
Strand = Plus / Minus
Query: 568 gaacatgtagagctcggcaaaatcaccttcttcgtcagtggccttagaggtgacagtgaa 627
||||||||||||||| ||||| || |||||||||||| | |||| ||||||||||||||
Sbjct: 591 gaacatgtagagctcagcaaagtcgccttcttcgtcattagcctntgaggtgacagtgaa 532
Query: 628 gctcgtgtcgataccagcaagcaccttcaggagaccctggaagacggcaaataaatgcgc 687
| | ||||||||||| |||||||||||||| |||||||| ||||||||||| | ||| ||
Sbjct: 531 gttggtgtcgataccggcaagcaccttcagaagaccctgaaagacggcaaacagatgggc 472
Query: 688 agaaataccaccaatgacccagaactgctcgttcctccaccattcatcaatgccaacacc 747
||| ||||| ||||||||||||||||| || ||||||||||| || ||||||||||||||
Sbjct: 471 agagatacctccaatgacccagaactgttcattcctccaccactcgtcaatgccaacacc 412
Query: 748 actccacctcatctcaaggataccagtggcaaagattgagataaagagcgatataaacca 807
|||||||||||||||||||||||| |||||||| ||||| | ||||| | || |||||
Sbjct: 411 actccacctcatctcaaggataccggtggcaaaaattgaaaggaagagagcaatgaacca 352
Query: 808 aacactctctaggttactaatctttgggatgatgaacttcccagtgagaagacaaactgc 867
| ||| | | ||| ||||||| ||| ||||||||||| |||||||| | ||| | ||
Sbjct: 351 gatactggccaagttgctaatctctggcatgatgaactttccagtgagcaaacagatagc 292
Query: 868 tggcaatatgcagtacaggaggagcgggattgatgtgagtggataaattgttgtgttgat 927
|||||||| || || | || ||||||| || || ||||| ||||| || ||||||||
Sbjct: 291 aggcaatatacaatagactagaagcgggagagacgttagtgggtaaatggtggtgttgat 232
Query: 928 ataagcaaatctctccaggaatttaagccgacctccatagccataccatatgggacaatg 987
||||| |||||||||||||| || || || ||||| ||||||||||||| ||| |||||
Sbjct: 231 gtaagcgaatctctccaggaacttgaggcgccctccgtagccataccataaggggcaatg 172
Query: 988 cctgctgaaaagaatttcaatggaaccaagagcccaccgaagcacttgattcaaacgatc 1047
|| ||||||||||||||||| |||||||||||||||||| |||||||| |||| ||||||
Sbjct: 171 ccggctgaaaagaatttcaacggaaccaagagcccaccggagcacttggttcagacgatc 112
Query: 1048 cgaaaggttgataggagcagatcccttgaaagctggtcgcttaggcatgcagtaga 1103
||||| ||||| || |||||||||||||||||||| |||||||||||||| ||||
Sbjct: 111 tgaaagattgatgggggcagatcccttgaaagctgggcgcttaggcatgcaataga 56
>gb|CA025257.1|CA025257 HZ51J24r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ51J24
5-PRIME, mRNA sequence
Length = 463
Score = 436 bits (220), Expect = e-120
Identities = 373/424 (87%)
Strand = Plus / Minus
Query: 386 cccatgaggcccttgaggaaggggtacaggtggacaatcacccagaacgcaaagaagagc 445
||||| || ||||||||||| ||||||| ||||| |||||||||||| ||||||||||||
Sbjct: 458 cccattagccccttgaggaatgggtacaagtggataatcacccagaaggcaaagaagagc 399
Query: 446 ttcccgaaaagaggtccccatgactggtaaccgctattgattgcgtaggaaatgccagcg 505
||||||||||| |||||||||||||| || ||||| ||||| |||||||| | |||||
Sbjct: 398 ttcccgaaaagcggtccccatgactgatagccgctgttgatcgcgtaggaggtaccagcc 339
Query: 506 accacgccgaccaggttgatgatcaaaatagtggttggtgggatcagaagcgttgtccac 565
|| || ||||| |||||||||||||| ||||| ||||||||||||||||| || ||||||
Sbjct: 338 acaacaccgacaaggttgatgatcaagatagttgttggtgggatcagaagagtcgtccac 279
Query: 566 ttgaacatgtagagctcggcaaaatcaccttcttcgtcagtggccttagaggtgacagtg 625
||||||||||||||||||||||||||| |||||||| | || || || |||||||||
Sbjct: 278 ttgaacatgtagagctcggcaaaatcattatcttcgtcggatgcttttgaagtgacagtg 219
Query: 626 aagctcgtgtcgataccagcaagcaccttcaggagaccctggaagacggcaaataaatgc 685
||||| |||||||| |||||||| |||||||||||||| |||||||| ||||| | |||
Sbjct: 218 aagctggtgtcgatgccagcaagtaccttcaggagaccttggaagacagcaaacagatgt 159
Query: 686 gcagaaataccaccaatgacccagaactgctcgttcctccaccattcatcaatgccaaca 745
||||||||||| || |||||||||||||| || ||||||||||| || || |||||||||
Sbjct: 158 gcagaaatacctccgatgacccagaactgttcattcctccaccactcgtcgatgccaaca 99
Query: 746 ccactccacctcatctcaaggataccagtggcaaagattgagataaagagcgatataaac 805
|| ||||||||||||||||||||||||||||||||||| || |||||||| || ||||||
Sbjct: 98 ccgctccacctcatctcaaggataccagtggcaaagatcgaaataaagagagagataaac 39
Query: 806 caaa 809
||||
Sbjct: 38 caaa 35
>gb|CA009062.1|CA009062 HU13B03r HU Hordeum vulgare subsp. vulgare cDNA clone HU13B03
5-PRIME, mRNA sequence
Length = 588
Score = 434 bits (219), Expect = e-120
Identities = 327/363 (90%)
Strand = Plus / Minus
Query: 1547 tcataaccatataaggccgttctgttaaacacacaaccagttcccacataaactggccct 1606
||||||||||| | ||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 373 tcataaccatagatagccgttctgttgaaaacacaaccagttcccacataaactggccct 314
Query: 1607 tgaatgccatcaagacctctcaagttaatatcgaaaaacacagtgttcctgtttgcatat 1666
|||||||||||||| || |||||||||||||| ||||| |||||||||||||| ||||||
Sbjct: 313 tgaatgccatcaaggcccctcaagttaatatcaaaaaagacagtgttcctgttcgcatat 254
Query: 1667 cggtcattcctatcaataccatcaaacctctgaggaaattggacataacagacattcctt 1726
|| ||||||||||||||||||||||||||||| || || || ||||||||||| | |
Sbjct: 253 cgatcattcctatcaataccatcaaacctctgtgggaactgcacataacagacttgcgga 194
Query: 1727 cctaggtttgggtccataaggaagcacatagcttctcgaagagccttgctattattgatg 1786
||||||||||| ||||| ||||||||||||||||| || | ||||||||| || ||||||
Sbjct: 193 cctaggtttggatccattaggaagcacatagcttcccggacagccttgctgttgttgatg 134
Query: 1787 tagtggtcacagtcaagattcaacatgtattgcccattagtaaggacagctgatacacga 1846
||||| ||||| |||||||||||||||||||| ||||||||||||||||| || ||||||
Sbjct: 133 tagtgatcacaatcaagattcaacatgtattgtccattagtaaggacagccgagacacga 74
Query: 1847 acaagtgcattcatggcaccagccttcttgtgatgttggaatccaggacgtttttcacga 1906
||||| |||||||||||||||||||||||||| || |||||||||||||| |||||||||
Sbjct: 73 acaagggcattcatggcaccagccttcttgtggtgctggaatccaggacgcttttcacga 14
Query: 1907 gac 1909
|||
Sbjct: 13 gac 11
Score = 73.8 bits (37), Expect = 4e-011
Identities = 84/100 (84%)
Strand = Plus / Minus
Query: 1335 agctcatttgagacataatcagcgatttctcatcatcaaactgagaaccttcaatccctt 1394
|||||||||||||||| | | |||||||||||||||||| || |||||||| || |
Sbjct: 588 agctcatttgagacatgagaactgatttctcatcatcaaacncagcaccttcaacaccct 529
Query: 1395 cctctatatcttcgagattaaatactggtacagaactgtc 1434
||||||| ||||| ||||| || ||||| |||||||||||
Sbjct: 528 cctctatgtcttcaagattgaacactggaacagaactgtc 489
>gb|CB860194.1|CB860194 HI12P13w HI Hordeum vulgare subsp. vulgare cDNA clone HI12P13
3-PRIME, mRNA sequence
Length = 651
Score = 434 bits (219), Expect = e-120
Identities = 432/503 (85%)
Strand = Plus / Plus
Query: 242 tcctagcagttgatgccacatttcgcgatatcaggaccagtgacccgggtggtgaatgga 301
|||||||||||||||||||| | |||||| || |||||||| || |||||||| ||
Sbjct: 149 tcctagcagttgatgccacacatttggatatctggcccagtgactcgtgtggtgaacggg 208
Query: 302 tcgatacgaacccacatcagggaaaagatcgacgcaaggaggatagcccagacaacgaca 361
||||| |||||||||| || ||| ||||| || ||||| ||||| |||||||| || ||
Sbjct: 209 tcgatgcgaacccacagcaaggagaagatggatgcaagaaggatggcccagacgacaacg 268
Query: 362 atggtcggcgtgcggttctgcttccccatgaggcccttgaggaaggggtacaggtggaca 421
||||||||||||||||||||| ||||| || ||||||||||| ||||||| ||||| |
Sbjct: 269 atggtcggcgtgcggttctgccgtcccattagccccttgaggaatgggtacaagtggata 328
Query: 422 atcacccagaacgcaaagaagagcttcccgaaaagaggtccccatgactggtaaccgcta 481
||||||||||| ||||||||||||||||||||||| |||||||||||||| || |||||
Sbjct: 329 atcacccagaaggcaaagaagagcttcccgaaaagcggtccccatgactgatagccgctg 388
Query: 482 ttgattgcgtaggaaatgccagcgaccacgccgaccaggttgatgatcaaaatagtggtt 541
||||| |||||||| | ||||| || || ||||| |||||||||||||| ||||| |||
Sbjct: 389 ttgatcgcgtaggaggtaccagccacaacaccgacaaggttgatgatcaagatagttgtt 448
Query: 542 ggtgggatcagaagcgttgtccacttgaacatgtagagctcggcaaaatcaccttcttcg 601
|||||||||||||| || ||||||||||||||||||||||||||||||||| ||||||
Sbjct: 449 ggtgggatcagaagagtcgtccacttgaacatgtagagctcggcaaaatcattatcttcg 508
Query: 602 tcagtggccttagaggtgacagtgaagctcgtgtcgataccagcaagcaccttcaggaga 661
|| | || || || |||||||||||||| |||||||| |||||||| ||||||||||||
Sbjct: 509 tcggatgcttttgaagtgacagtgaagctggtgtcgatgccagcaagtaccttcaggaga 568
Query: 662 ccctggaagacggcaaataaatgcgcagaaataccaccaatgacccagaactgctcgttc 721
|| |||||||| ||||| | ||| ||||||||||| || |||||||||||||| || |||
Sbjct: 569 ccttggaagacagcaaacagatgtgcagaaatacctccgatgacccagaactgttcattc 628
Query: 722 ctccaccattcatcaatgccaac 744
|||||||| || || ||||||||
Sbjct: 629 ctccaccactcgtcgatgccaac 651
>gb|AV931092.1|AV931092 AV931092 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd18i05 3', mRNA sequence
Length = 658
Score = 432 bits (218), Expect = e-119
Identities = 434/506 (85%)
Strand = Plus / Plus
Query: 242 tcctagcagttgatgccacatttcgcgatatcaggaccagtgacccgggtggtgaatgga 301
|||||||||||||||||||| | |||||| || |||||||| || |||||||| ||
Sbjct: 149 tcctagcagttgatgccacacatttggatatctggcccagtgactcgtgtggtgaacggg 208
Query: 302 tcgatacgaacccacatcagggaaaagatcgacgcaaggaggatagcccagacaacgaca 361
||||| |||||||||| || ||| ||||| || ||||| ||||| |||||||| || ||
Sbjct: 209 tcgatgcgaacccacagcaaggagaagatggatgcaagaaggatggcccagacgacaacg 268
Query: 362 atggtcggcgtgcggttctgcttccccatgaggcccttgaggaaggggtacaggtggaca 421
||||||||||||||||||||| ||||| || ||||||||||| ||||||| ||||| |
Sbjct: 269 atggtcggcgtgcggttctgccgtcccattagccccttgaggaatgggtacaagtggata 328
Query: 422 atcacccagaacgcaaagaagagcttcccgaaaagaggtccccatgactggtaaccgcta 481
||||||||||| ||||||||||||||||||||||| |||||||||||||| || ||| |
Sbjct: 329 atcacccagaaggcaaagaagagcttcccgaaaagcggtccccatgactgatagccgatg 388
Query: 482 ttgattgcgtaggaaatgccagcgaccacgccgaccaggttgatgatcaaaatagtggtt 541
||||| |||||||| | ||||| || || ||||| |||||||||||||| ||||| |||
Sbjct: 389 ttgatcgcgtaggaggtaccagccacaacaccgacaaggttgatgatcaagatagttgtt 448
Query: 542 ggtgggatcagaagcgttgtccacttgaacatgtagagctcggcaaaatcaccttcttcg 601
|||||||||||||| || ||||||||||||||||||||||||||||||||| ||||||
Sbjct: 449 ggtgggatcagaagagtcgtccacttgaacatgtagagctcggcaaaatcattatcttcg 508
Query: 602 tcagtggccttagaggtgacagtgaagctcgtgtcgataccagcaagcaccttcaggaga 661
|| | || || || |||||||||||||| |||||||| |||||||| ||||||||||||
Sbjct: 509 tcggatgcttttgaagtgacagtgaagctggtgtcgatgccagcaagtaccttcaggaga 568
Query: 662 ccctggaagacggcaaataaatgcgcagaaataccaccaatgacccagaactgctcgttc 721
|| |||||||| ||||| | ||| ||||||||||| || |||||||||||||| || |||
Sbjct: 569 ccttggaagacagcaaacagatgtgcagaaatacctccgatgacccagaactgttcattc 628
Query: 722 ctccaccattcatcaatgccaacacc 747
|||||||| || || |||||||||||
Sbjct: 629 ctccaccactcgtcgatgccaacacc 654
>gb|CV061189.1|CV061189 BNEL65h6 Barley EST endosperm library Hordeum vulgare subsp. vulgare
cDNA clone BNEL65h6 5' similar to putative cellulose
synthase, mRNA sequence
Length = 590
Score = 432 bits (218), Expect = e-119
Identities = 497/590 (84%)
Strand = Plus / Minus
Query: 757 catctcaaggataccagtggcaaagattgagataaagagcgatataaaccaaacactctc 816
||||||||||||||| |||||||| ||||| | ||||| | || ||||| | ||| |
Sbjct: 590 catctcaaggataccggtggcaaaaattgaaaggaagagagcaatgaaccagatactggc 531
Query: 817 taggttactaatctttgggatgatgaacttcccagtgagaagacaaactgctggcaatat 876
| ||| ||||||| ||| ||||||||||| |||||||| ||||| | || ||||||||
Sbjct: 530 caagttgctaatctctggcatgatgaactttccagtgagcagacagatagcaggcaatat 471
Query: 877 gcagtacaggaggagcgggattgatgtgagtggataaattgttgtgttgatataagcaaa 936
|| || | || ||||||| || || ||||| ||||| || |||||||| ||||| ||
Sbjct: 470 acaatagactagaagcgggagagacgttagtgggtaaatggtggtgttgatgtaagcgaa 411
Query: 937 tctctccaggaatttaagccgacctccatagccataccatatgggacaatgcctgctgaa 996
|||||||||||| || || || ||||| ||||||||||||| ||| ||||||| ||||||
Sbjct: 410 tctctccaggaacttgaggcgccctccgtagccataccataaggggcaatgccggctgaa 351
Query: 997 aagaatttcaatggaaccaagagcccaccgaagcacttgattcaaacgatccgaaaggtt 1056
|||||||||| |||||||||||||||||| |||||||| |||| |||||| ||||| ||
Sbjct: 350 aagaatttcacgggaaccaagagcccaccggagcacttggttcagacgatctgaaagatt 291
Query: 1057 gataggagcagatcccttgaaagctggtcgcttaggcatgcagtagattgatcgccagcc 1116
||| || |||||||||||||||||||| |||||||||||||| |||| ||| ||||||||
Sbjct: 290 gatgggggcagatcccttgaaagctgggcgcttaggcatgcaatagactgaccgccagcc 231
Query: 1117 tcgagcatgcatcttgaatccggtgagaatgtcttctgtaacagaaccatagatccaccc 1176
|| || |||||||||||||| |||||||| |||||||| ||||| ||||| ||||| ||
Sbjct: 230 tcttgcgtgcatcttgaatccagtgagaatatcttctgtgacagatccataaatccaacc 171
Query: 1177 aatctcagttccccagtcagttttgtcctcatagccacagctgatgacatgaatagcttc 1236
||||||||||||||| |||| ||||||||||||||||| || |||||||| ||||||||
Sbjct: 170 aatctcagttccccactcagacttgtcctcatagccacaacttatgacatggatagcttc 111
Query: 1237 tttcagaagagactctggagttgcagattgtggaacaccgccatattccatcagagtaga 1296
||||| |||||| |||||||| | || || || ||||| ||||||||||||||||| ||
Sbjct: 110 tttcaaaagagattctggagtggaggactgagggacaccaccatattccatcagagtgga 51
Query: 1297 ggctacaaaaacactggactggccaaatctcttctccaagctcatttgag 1346
||| ||||| | |||||||||||||||||||| |||||||||||||
Sbjct: 50 ggcaacaaatgctgctgactggccaaatctcttctctaagctcatttgag 1
>gb|BE193304.2|BE193304 HVSMEh0080I07f Hordeum vulgare 5-45 DAP spike EST library HVcDNA0009
(5 to 45 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEh0080I07f, mRNA sequence
Length = 682
Score = 430 bits (217), Expect = e-118
Identities = 356/403 (88%)
Strand = Plus / Minus
Query: 1583 ccagttcccacataaactggcccttgaatgccatcaagacctctcaagttaatatcgaaa 1642
|||||||||||||||||||||| ||||||||||||||| || |||||||||||||| |||
Sbjct: 403 ccagttcccacataaactggcctttgaatgccatcaaggcccctcaagttaatatcaaaa 344
Query: 1643 aacacagtgttcctgtttgcatatcggtcattcctatcaataccatcaaacctctgagga 1702
|| |||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||
Sbjct: 343 aagacagtgttcctgttcgcatatcgatcattcctatcaataccatcaaacctctgtggg 284
Query: 1703 aattggacataacagacattccttcctaggtttgggtccataaggaagcacatagcttct 1762
|| || ||||||||||| | | | ||||||||| ||||| |||||||||||||||||
Sbjct: 283 aactgcacataacagacttgcggacntaggtttggatccattaggaagcacatagcttcc 224
Query: 1763 cgaagagccttgctattattgatgtagtggtcacagtcaagattcaacatgtattgccca 1822
|| | ||||||||| || ||||||||||| ||||| |||||||||||||||||||| |||
Sbjct: 223 cggacagccttgctgttgttgatgtagtgatcacaatcaagattcaacatgtattgtcca 164
Query: 1823 ttagtaaggacagctgatacacgaacaagtgcattcatggcaccagccttcttgtgatgt 1882
|||||||||||||| || ||||||||||| |||||||||||||||||||||||||| ||
Sbjct: 163 ttagtaaggacagccgagacacgaacaagggcattcatggcaccagccttcttgtggtgc 104
Query: 1883 tggaatccaggacgtttttcacgagacacataaaccaaacgaggaagttcattgccttca 1942
|||||||||||||| ||||||||||||||||| |||||||| || || ||||| || ||
Sbjct: 103 tggaatccaggacgcttttcacgagacacatagaccaaacgggggagctcattaccctcg 44
Query: 1943 acgtcaagccctccactgtgacccaggaaaacctgaatcattc 1985
||||| || ||||||||||| |||||||| ||||||||||
Sbjct: 43 gtatcaaggccaccactgtgaccaaggaaaacntgaatcattc 1
>gb|BU967242.1|BU967242 HB03K11r BC Hordeum vulgare subsp. vulgare cDNA clone HB03K11
5-PRIME, mRNA sequence
Length = 577
Score = 428 bits (216), Expect = e-118
Identities = 420/488 (86%)
Strand = Plus / Minus
Query: 242 tcctagcagttgatgccacatttcgcgatatcaggaccagtgacccgggtggtgaatgga 301
|||||||||||||||||||| | |||||| || |||||||| || |||||||| ||
Sbjct: 518 tcctagcagttgatgccacacatttggatatctggcccagtgactcgtgtggtgaacggg 459
Query: 302 tcgatacgaacccacatcagggaaaagatcgacgcaaggaggatagcccagacaacgaca 361
||||| |||||||||| || ||| ||||| || ||||| ||||| |||||||| || ||
Sbjct: 458 tcgatgcgaacccacagcaaggagaagatggatgcaagaaggatggcccagacgacaacg 399
Query: 362 atggtcggcgtgcggttctgcttccccatgaggcccttgaggaaggggtacaggtggaca 421
||||||||||||||||||||| ||||| || ||||||||||| ||||||| ||||| |
Sbjct: 398 atggtcggcgtgcggttctgccgtcccattagccccttgaggaatgggtacaagtggata 339
Query: 422 atcacccagaacgcaaagaagagcttcccgaaaagaggtccccatgactggtaaccgcta 481
||||||||||| ||||||||||||||||||||||| |||||||||||||| || |||||
Sbjct: 338 atcacccagaaggcaaagaagagcttcccgaaaagcggtccccatgactgatagccgctg 279
Query: 482 ttgattgcgtaggaaatgccagcgaccacgccgaccaggttgatgatcaaaatagtggtt 541
||||| |||||||| | ||||| || || ||||| |||||||||||||| ||||| |||
Sbjct: 278 ttgatcgcgtaggaggtaccagccacaacaccgacaaggttgatgatcaagatagttgtt 219
Query: 542 ggtgggatcagaagcgttgtccacttgaacatgtagagctcggcaaaatcaccttcttcg 601
|||||||||||||| || ||||||||||||||||||||||||||||||||| ||||||
Sbjct: 218 ggtgggatcagaagagtcgtccacttgaacatgtagagctcggcaaaatcattatcttcg 159
Query: 602 tcagtggccttagaggtgacagtgaagctcgtgtcgataccagcaagcaccttcaggaga 661
|| | || || || |||||||||||||| |||||||| |||||||| ||||||||||||
Sbjct: 158 tcggatgcttttgaagtgacagtgaagctggtgtcgatgccagcaagtaccttcaggaga 99
Query: 662 ccctggaagacggcaaataaatgcgcagaaataccaccaatgacccagaactgctcgttc 721
|| |||||||| ||||| | ||| ||||||||||| || |||||||||||||| || |||
Sbjct: 98 ccttggaagacagcaaacagatgtgcagaaatacctccgatgacccagaactgttcattc 39
Query: 722 ctccacca 729
||||||||
Sbjct: 38 ctccacca 31
>gb|AV931093.1|AV931093 AV931093 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd18i06 3', mRNA sequence
Length = 658
Score = 426 bits (215), Expect = e-117
Identities = 431/503 (85%)
Strand = Plus / Plus
Query: 242 tcctagcagttgatgccacatttcgcgatatcaggaccagtgacccgggtggtgaatgga 301
|||||||||||||||||||| | |||||| || |||||||| || |||||||| ||
Sbjct: 156 tcctagcagttgatgccacacatttggatatctggcccagtgactcgtgtggtgaacggg 215
Query: 302 tcgatacgaacccacatcagggaaaagatcgacgcaaggaggatagcccagacaacgaca 361
||||| |||||||||| || ||| ||||| || ||||| ||||| |||||||| || ||
Sbjct: 216 tcgatgcgaacccacagcaaggagaagatggatgcaagaaggatggcccagacgacaacg 275
Query: 362 atggtcggcgtgcggttctgcttccccatgaggcccttgaggaaggggtacaggtggaca 421
||||||||||||||||||||| ||||| || ||||||||||| ||||||| ||||| |
Sbjct: 276 atggtcggcgtgcggttctgccgtcccattagccccttgaggaatgggtacaagtggata 335
Query: 422 atcacccagaacgcaaagaagagcttcccgaaaagaggtccccatgactggtaaccgcta 481
||||||||||| ||||||||||||||||||||||| |||||||||||||| || ||| |
Sbjct: 336 atcacccagaaggcaaagaagagcttcccgaaaagcggtccccatgactgatagccgatg 395
Query: 482 ttgattgcgtaggaaatgccagcgaccacgccgaccaggttgatgatcaaaatagtggtt 541
||||| |||||||| | ||||| || || ||||| |||||||||||||| ||||| |||
Sbjct: 396 ttgatcgcgtaggaggtaccagccacaacaccgacaaggttgatgatcaagatagttgtt 455
Query: 542 ggtgggatcagaagcgttgtccacttgaacatgtagagctcggcaaaatcaccttcttcg 601
|||||||||||||| || ||||||||||||||||||||||||||||||||| ||||||
Sbjct: 456 ggtgggatcagaagagtcgtccacttgaacatgtagagctcggcaaaatcattatcttcg 515
Query: 602 tcagtggccttagaggtgacagtgaagctcgtgtcgataccagcaagcaccttcaggaga 661
|| | || || || |||||||||||||| |||||||| |||||||| ||||||||||||
Sbjct: 516 tcggatgcttttgaagtgacagtgaagctggtgtcgatgccagcaagtaccttcaggaga 575
Query: 662 ccctggaagacggcaaataaatgcgcagaaataccaccaatgacccagaactgctcgttc 721
|| |||||||| ||||| | ||| ||||||||||| || |||||||||||||| || |||
Sbjct: 576 ccttggaagacagcaaacagatgtgcagaaatacctccgatgacccagaactgttcattc 635
Query: 722 ctccaccattcatcaatgccaac 744
|||||||| || || ||||||||
Sbjct: 636 ctccaccactcgtcgatgccaac 658
>gb|CA012990.1|CA012990 HT07B01r HT Hordeum vulgare subsp. vulgare cDNA clone HT07B01
5-PRIME, mRNA sequence
Length = 579
Score = 418 bits (211), Expect = e-115
Identities = 475/563 (84%)
Strand = Plus / Minus
Query: 471 ggtaaccgctattgattgcgtaggaaatgccagcgaccacgccgaccaggttgatgatca 530
||||||| || ||||| |||||||| | ||||| || || ||||||| ||| |||||||
Sbjct: 579 ggtaaccactgttgatggcgtaggaggtaccagcaacgacaccgaccatgttaatgatca 520
Query: 531 aaatagtggttggtgggatcagaagcgttgtccacttgaacatgtagagctcggcaaaat 590
| || || || || ||||| |||||||| ||||||||||||||||||||||| ||||| |
Sbjct: 519 agatggtcgtcggagggatgagaagcgtcgtccacttgaacatgtagagctcagcaaagt 460
Query: 591 caccttcttcgtcagtggccttagaggtgacagtgaagctcgtgtcgataccagcaagca 650
| |||||||||||| | ||||| ||||||||||||||| | ||||||||||| |||||||
Sbjct: 459 cgccttcttcgtcattagcctttgaggtgacagtgaagttggtgtcgataccggcaagca 400
Query: 651 ccttcaggagaccctggaagacggcaaataaatgcgcagaaataccaccaatgacccaga 710
||||||| |||||||| ||||||||||| | ||| ||||| ||||| |||||||||||||
Sbjct: 399 ccttcagaagaccctgaaagacggcaaacagatgggcagagatacctccaatgacccaga 340
Query: 711 actgctcgttcctccaccattcatcaatgccaacaccactccacctcatctcaaggatac 770
|||| || ||||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct: 339 actgttcattcctccaccactcgtcaatgccaacaccactccacctcatctcaaggatac 280
Query: 771 cagtggcaaagattgagataaagagcgatataaaccaaacactctctaggttactaatct 830
| |||||||| ||||| | ||||| | || ||||| | ||| | | ||| |||||||
Sbjct: 279 cggtggcaaaaattgaaaggaagagagcaatgaaccagatactggccaagttgctaatct 220
Query: 831 ttgggatgatgaacttcccagtgagaagacaaactgctggcaatatgcagtacaggagga 890
||| ||||||||||| |||||||| | ||| | || |||||||| || || | || |
Sbjct: 219 ctggcatgatgaactttccagtgagcaaacagatagcaggcaatatacaatagactagaa 160
Query: 891 gcgggattgatgtgagtggataaattgttgtgttgatataagcaaatctctccaggaatt 950
|||||| || || ||||| ||||| || |||||||| ||||| |||||||||||||| |
Sbjct: 159 gcgggagagacgttagtgggtaaatggtggtgttgatgtaagcgaatctctccaggaact 100
Query: 951 taagccgacctccatagccataccatatgggacaatgcctgctgaaaagaatttcaatgg 1010
| || || ||||| ||||||||||||| ||| ||||||| ||||||||||||||||| ||
Sbjct: 99 tgaggcgccctccgtagccataccataaggggcaatgccggctgaaaagaatttcaacgg 40
Query: 1011 aaccaagagcccaccgaagcact 1033
|||||||||||||||| ||||||
Sbjct: 39 aaccaagagcccaccggagcact 17
>gb|AV914152.1|AV914152 AV914152 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags4p09 5', mRNA sequence
Length = 583
Score = 416 bits (210), Expect = e-114
Identities = 435/510 (85%)
Strand = Plus / Minus
Query: 346 agcccagacaacgacaatggtcggcgtgcggttctgcttccccatgaggcccttgaggaa 405
||||||||| | |||||| ||||| |||||||| ||| | ||||| || |||||||||||
Sbjct: 579 agcccagacgatgacaatcgtcggtgtgcggttttgcctgcccataagacccttgaggaa 520
Query: 406 ggggtacaggtggacaatcacccagaacgcaaagaagagcttcccgaaaagaggtcccca 465
|||||| | ||| |||||||||||||| |||||||||||||||||||| || || |||||
Sbjct: 519 ggggtataagtgaacaatcacccagaaggcaaagaagagcttcccgaagagcggccccca 460
Query: 466 tgactggtaaccgctattgattgcgtaggaaatgccagcgaccacgccgaccaggttgat 525
|| |||||||| || ||||| |||||||| | ||||| || || ||||||| ||| ||
Sbjct: 459 agattggtaaccactgttgatggcgtaggaggtaccagcaacgacaccgaccatgttaat 400
Query: 526 gatcaaaatagtggttggtgggatcagaagcgttgtccacttgaacatgtagagctcggc 585
|||||| || || || || ||||| |||||||| ||||||||||||||||||||||| ||
Sbjct: 399 gatcaagatggtcgtcggagggatgagaagcgtcgtccacttgaacatgtagagctcagc 340
Query: 586 aaaatcaccttcttcgtcagtggccttagaggtgacagtgaagctcgtgtcgataccagc 645
||| || |||||||||||| | ||||| ||||||||||||||| | ||||||||||| ||
Sbjct: 339 aaagtcgccttcttcgtcattagcctttgaggtgacagtgaagttggtgtcgataccggc 280
Query: 646 aagcaccttcaggagaccctggaagacggcaaataaatgcgcagaaataccaccaatgac 705
|||||||||||| |||||||| ||||||||||| | ||| ||||| ||||| ||||||||
Sbjct: 279 aagcaccttcagaagaccctgaaagacggcaaacagatgggcagagatacctccaatgac 220
Query: 706 ccagaactgctcgttcctccaccattcatcaatgccaacaccactccacctcatctcaag 765
||||||||| || ||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct: 219 ccagaactgttcattcctccaccactcgtcaatgccaacaccactccacctcatctcaag 160
Query: 766 gataccagtggcaaagattgagataaagagcgatataaaccaaacactctctaggttact 825
|||||| |||||||| ||||| | ||||| | || ||||| | ||| | | ||| ||
Sbjct: 159 gataccggtggcaaaaattgaaaggaagagagcaatgaaccagatactggccaagttgct 100
Query: 826 aatctttgggatgatgaacttcccagtgag 855
||||| ||| ||||||||||| ||||||||
Sbjct: 99 aatctctggcatgatgaactttccagtgag 70
>gb|AL504419.1|AL504419 AL504419 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW05D18V 5', mRNA sequence
Length = 671
Score = 412 bits (208), Expect = e-113
Identities = 406/471 (86%), Gaps = 1/471 (0%)
Strand = Plus / Minus
Query: 965 tagccataccatat-gggacaatgcctgctgaaaagaatttcaatggaaccaagagccca 1023
||||||||||||| ||| ||||||| |||||||||||||||| |||||||||||||||
Sbjct: 636 tagccataccataaaggggcaatgccggctgaaaagaatttcancggaaccaagagccca 577
Query: 1024 ccgaagcacttgattcaaacgatccgaaaggttgataggagcagatcccttgaaagctgg 1083
||| |||||||| |||| |||||| ||||| ||||| || ||||||||||||||||||||
Sbjct: 576 ccggagcacttggttcagacgatctgaaagattgatgggggcagatcccttgaaagctgg 517
Query: 1084 tcgcttaggcatgcagtagattgatcgccagcctcgagcatgcatcttgaatccggtgag 1143
|||||||||||||| |||| ||| |||||||||| || |||||||||||||| |||||
Sbjct: 516 gcgcttaggcatgcaatagactgaccgccagcctcttgcgtgcatcttgaatccagtgag 457
Query: 1144 aatgtcttctgtaacagaaccatagatccacccaatctcagttccccagtcagttttgtc 1203
||| |||||||| ||||| ||||| ||||| ||||||||||||||||| |||| |||||
Sbjct: 456 aatatcttctgtgacagatccataaatccaaccaatctcagttccccactcagacttgtc 397
Query: 1204 ctcatagccacagctgatgacatgaatagcttctttcagaagagactctggagttgcaga 1263
|||||||||||| || |||||||| ||||||||||||| |||||| |||||||| | ||
Sbjct: 396 ctcatagccacaacttatgacatggatagcttctttcaaaagagattctggagtggagga 337
Query: 1264 ttgtggaacaccgccatattccatcagagtagaggctacaaaaacactggactggccaaa 1323
|| |||||||| ||||||||||||||||| ||||| ||||| | |||||||||||
Sbjct: 336 ctgaggaacaccaccatattccatcagagtggaggcaacaaatgctgctgactggccaaa 277
Query: 1324 tctcttctccaagctcatttgagacataatcagcgatttctcatcatcaaactgagaacc 1383
||||||||| ||||||||||||||||| | | |||||||||||||||||| || |||
Sbjct: 276 tctcttctctaagctcatttgagacatgagaactgatttctcatcatcaaacccagcacc 217
Query: 1384 ttcaatcccttcctctatatcttcgagattaaatactggtacagaactgtc 1434
||||| || |||||||| ||||| ||||| || ||||| |||||||||||
Sbjct: 216 ttcaacaccctcctctatgtcttcaagattgaacactggaacagaactgtc 166
Score = 50.1 bits (25), Expect = 5e-004
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 1547 tcataaccatataaggccgttctgttaaacacacaaccagttccc 1591
||||||||||| | ||||||||||| || |||||||||||||||
Sbjct: 50 tcataaccatagatagccgttctgttgaaaacacaaccagttccc 6
>gb|AV925770.1|AV925770 AV925770 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd25l19 5', mRNA sequence
Length = 425
Score = 404 bits (204), Expect = e-111
Identities = 347/395 (87%)
Strand = Plus / Minus
Query: 415 gtggacaatcacccagaacgcaaagaagagcttcccgaaaagaggtccccatgactggta 474
||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||| ||
Sbjct: 419 gtggataatcacccagaaggcaaagaagagcttcccgaaaagcggtccccatgactgata 360
Query: 475 accgctattgattgcgtaggaaatgccagcgaccacgccgaccaggttgatgatcaaaat 534
||||| ||||| |||||||| | ||||| | || ||||| |||||||||||||| ||
Sbjct: 359 gccgctgttgatcgcgtaggaggtaccagccncaacaccgacaaggttgatgatcaagat 300
Query: 535 agtggttggtgggatcagaagcgttgtccacttgaacatgtagagctcggcaaaatcacc 594
||| ||||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 299 agttgttggtgggatcagaagagtcgtccacttgaacatgtagagctcggcaaaatcatt 240
Query: 595 ttcttcgtcagtggccttagaggtgacagtgaagctcgtgtcgataccagcaagcacctt 654
|||||||| | || || || |||||||||||||| |||||||| |||||||| |||||
Sbjct: 239 atcttcgtcggatgcttttgaagtgacagtgaagctggtgtcgatgccagcaagtacctt 180
Query: 655 caggagaccctggaagacggcaaataaatgcgcagaaataccaccaatgacccagaactg 714
||||||||| |||||||| ||||| | ||| ||||||||||| || ||||||||||||||
Sbjct: 179 caggagaccttggaagacagcaaacagatgtgcagaaatacctccgatgacccagaactg 120
Query: 715 ctcgttcctccaccattcatcaatgccaacaccactccacctcatctcaaggataccagt 774
|| ||||||||||| || || ||||||||||| ||||||||||||||||||||||||||
Sbjct: 119 ttcattcctccaccactcgtcgatgccaacaccgctccacctcatctcaaggataccagt 60
Query: 775 ggcaaagattgagataaagagcgatataaaccaaa 809
||||||||| || |||||||| || ||||||||||
Sbjct: 59 ggcaaagatcgaaataaagagagagataaaccaaa 25
>gb|BU990492.1|BU990492 HF25D10r HF Hordeum vulgare subsp. vulgare cDNA clone HF25D10
5-PRIME, mRNA sequence
Length = 621
Score = 402 bits (203), Expect = e-110
Identities = 398/463 (85%)
Strand = Plus / Minus
Query: 293 gtgaatggatcgatacgaacccacatcagggaaaagatcgacgcaaggaggatagcccag 352
||||||||||| | ||||||||||| || ||| ||||| || || ||||||| |||||||
Sbjct: 472 gtgaatggatcaacacgaacccacagcaaggagaagattgaagccaggaggacagcccag 413
Query: 353 acaacgacaatggtcggcgtgcggttctgcttccccatgaggcccttgaggaaggggtac 412
|| | |||||| ||||| |||||||| ||| | ||||| || |||||||||||||||||
Sbjct: 412 acgatgacaatcgtcggtgtgcggttttgcctgcccataagacccttgaggaaggggtat 353
Query: 413 aggtggacaatcacccagaacgcaaagaagagcttcccgaaaagaggtccccatgactgg 472
| ||| |||||||||||||| |||||||||||||||||||| || || ||||| || |||
Sbjct: 352 aagtgaacaatcacccagaaggcaaagaagagcttcccgaagagcggcccccaagattgg 293
Query: 473 taaccgctattgattgcgtaggaaatgccagcgaccacgccgaccaggttgatgatcaaa 532
||||| || ||||| |||||||| | ||||| || || ||||||| ||| ||||||||
Sbjct: 292 taaccactgttgatggcgtaggaggtaccagcaacgacaccgaccatgttaatgatcaag 233
Query: 533 atagtggttggtgggatcagaagcgttgtccacttgaacatgtagagctcggcaaaatca 592
|| || || || ||||| |||||||| ||||||||||||||||||||||| ||||| ||
Sbjct: 232 atggtcgtcggagggatgagaagcgtcgtccacttgaacatgtagagctcagcaaagtcg 173
Query: 593 ccttcttcgtcagtggccttagaggtgacagtgaagctcgtgtcgataccagcaagcacc 652
|||||||||||| | ||||| ||||||||||||||| | ||||||||||| |||||||||
Sbjct: 172 ccttcttcgtcattagcctttgaggtgacagtgaagttggtgtcgataccggcaagcacc 113
Query: 653 ttcaggagaccctggaagacggcaaataaatgcgcagaaataccaccaatgacccagaac 712
||||| |||||||| ||||||||||| | ||| ||||| ||||| |||||||||||||||
Sbjct: 112 ttcagaagaccctgaaagacggcaaacagatgggcagagatacctccaatgacccagaac 53
Query: 713 tgctcgttcctccaccattcatcaatgccaacaccactccacc 755
|| || ||||||||||| || ||||||||||||||||||||||
Sbjct: 52 tgttcattcctccaccactcgtcaatgccaacaccactccacc 10
>gb|BF255020.3|BF255020 HVSMEf0005K21f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0005K21f, mRNA sequence
Length = 594
Score = 396 bits (200), Expect = e-108
Identities = 452/532 (84%), Gaps = 3/532 (0%)
Strand = Plus / Minus
Query: 905 agtggataaattgttgtgttgatataagcaaatctctccaggaatttaagccgacctcca 964
||||| ||||| || |||||||| ||||| |||||||||||||| || | || |||||
Sbjct: 590 agtgggtaaatggtggtgttgatgtaagcgaatctctccaggaacttgaagcgccctccg 531
Query: 965 tagccataccatatgggacaatgcctgctgaaaagaatttcaatggaaccaagagcccac 1024
|||| | |||||| ||| ||||||| ||||||||||||||||| |||||||||||||| |
Sbjct: 530 tagcaa-accataaggggcaatgccggctgaaaagaatttcaacggaaccaagagccccc 472
Query: 1025 cgaagcacttgattcaaacgatccgaaaggttgataggagcagatcccttgaaagctggt 1084
|| |||||||| ||||| ||||| ||||| ||||| || ||||||||||||||||||||
Sbjct: 471 cggagcacttggttcaagcgatctgaaagattgatgggggcagatcccttgaaagctggg 412
Query: 1085 cgctt-aggcatgcagtagattgatcgccagcctcgagcatgcat-cttgaatccggtga 1142
||||| ||||||||| |||| ||| |||||||||| || ||||| ||||||||| ||||
Sbjct: 411 cgctttaggcatgcaatagactgaccgccagcctcttgcgtgcattcttgaatccagtga 352
Query: 1143 gaatgtcttctgtaacagaaccatagatccacccaatctcagttccccagtcagttttgt 1202
|||| |||||||| ||||| ||||| ||||| ||||||||||||||||| |||| ||||
Sbjct: 351 gaatatcttctgtgacagatccataaatccaaccaatctcagttccccactcagacttgt 292
Query: 1203 cctcatagccacagctgatgacatgaatagcttctttcagaagagactctggagttgcag 1262
||||||||||||| || |||||||| ||||||||||||| |||||| |||||||| | |
Sbjct: 291 cctcatagccacaacttatgacatggatagcttctttcaaaagagattctggagtggagg 232
Query: 1263 attgtggaacaccgccatattccatcagagtagaggctacaaaaacactggactggccaa 1322
| || |||||||| ||||||||||||||||| ||||| ||||| | ||||||||||
Sbjct: 231 actgaggaacaccaccatattccatcagagtggaggcaacaaatgctgctgactggccaa 172
Query: 1323 atctcttctccaagctcatttgagacataatcagcgatttctcatcatcaaactgagaac 1382
|||| ||||| ||||||||||||||||| | | |||||||||||||||||| || ||
Sbjct: 171 atcttttctctaagctcatttgagacatgagaactgatttctcatcatcaaacccagcac 112
Query: 1383 cttcaatcccttcctctatatcttcgagattaaatactggtacagaactgtc 1434
|||||| || |||||||| ||||| ||||| || ||||| |||||||||||
Sbjct: 111 cttcaacaccctcctctatgtcttcaagattgaacactggaacagaactgtc 60
>gb|CA022476.1|CA022476 HZ43F10r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ43F10
5-PRIME, mRNA sequence
Length = 465
Score = 396 bits (200), Expect = e-108
Identities = 371/428 (86%)
Strand = Plus / Minus
Query: 2474 tcaaggtatgtttcacggttgattggggaccactttgggaactgatccaaaatccaggac 2533
|||||||| |||||||| || | ||| |||||||| |||||||||||||||||||||||
Sbjct: 459 tcaaggtaagtttcacgattcactggagaccacttggggaactgatccaaaatccaggaa 400
Query: 2534 aaagcaaaccagatctcacatatgacggataaaagccacagtggatatgcattgttcaca 2593
||||||||||| ||||||||||| || |||| ||||| |||||||||||||| |||
Sbjct: 399 aaagcaaaccaaatctcacatatcaccgatagcagccaaagtggatatgcattacggaca 340
Query: 2594 ggatgtgtgatacggtagcgcaagaatatgcatagaacagccaaacgtagcacaatgacc 2653
|| | ||||||||||||| ||| ||| ||||| || ||| ||| |||||||||||||||
Sbjct: 339 gggtttgtgatacggtagtgcaggaagatgcagaggacaatcaatcgtagcacaatgacc 280
Query: 2654 attctgtacggatttattctggatgaaggaattggcacttttctagatagaggttgccga 2713
|||||||| |||||||||||||||||||||||||||||||||||||| ||||| || ||
Sbjct: 279 attctgtagggatttattctggatgaaggaattggcacttttctagagagaggctggcgt 220
Query: 2714 gtttcatcattcagtaaggcatcttccatgttataatcagtagaagcatcaatatcagca 2773
||||||||||||||||||| ||||||||| || |||||| | ||||| |||||| ||
Sbjct: 219 gtttcatcattcagtaaggggtcttccatgccgtagtcagtacatgcatcgatatcacca 160
Query: 2774 actccacgcccttctgatggagcaatgcttgttccattggtcataggaattgcaccttta 2833
|||||| ||||| || |||||||||||||||||||| ||||| ||||||||||| ||
Sbjct: 159 tttccacggccttcggaaggagcaatgcttgttccattagtcatgggaattgcacccttg 100
Query: 2834 tccttcattttccatccatccaccctctctttccatgcaacattgccaaggctaccggag 2893
|| ||||||||||| ||||| || ||||||||||| |||||||||||||||||||| |||
Sbjct: 99 tctttcattttccagccatcaactctctctttccacgcaacattgccaaggctaccagag 40
Query: 2894 aactccct 2901
||||||||
Sbjct: 39 aactccct 32
>gb|BF624752.2|BF624752 HVSMEa0017K09f Hordeum vulgare seedling shoot EST library HVcDNA0001
(Cold stress) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEa0017K09f, mRNA sequence
Length = 789
Score = 391 bits (197), Expect = e-106
Identities = 332/377 (88%)
Strand = Plus / Minus
Query: 1547 tcataaccatataaggccgttctgttaaacacacaaccagttcccacataaactggccct 1606
||||||||||| | |||||| |||| || |||||||||||||| |||||||||||||||
Sbjct: 520 tcataaccatagatagccgttgtgttgaaaacacaaccagttccgacataaactggccct 461
Query: 1607 tgaatgccatcaagacctctcaagttaatatcgaaaaacacagtgttcctgtttgcatat 1666
|||||||||||| || |||||||||||||| ||||| |||||||||||||| ||||||
Sbjct: 460 gaaatgccatcaaggcccctcaagttaatatcaaaaaagacagtgttcctgttcgcatat 401
Query: 1667 cggtcattcctatcaataccatcaaacctctgaggaaattggacataacagacattcctt 1726
|| ||||||||||||| |||||| |||||||| || || || ||||||||||| | |
Sbjct: 400 cgatcattcctatcaagaccatcgaacctctgtgggaactgcacataacagacttgcgga 341
Query: 1727 cctaggtttgggtccataaggaagcacatagcttctcgaagagccttgctattattgatg 1786
||||||||||| ||||| ||||||||||||||||| || | ||| ||||| || ||||||
Sbjct: 340 cctaggtttggatccattaggaagcacatagcttcccggacagcattgctgttgttgatg 281
Query: 1787 tagtggtcacagtcaagattcaacatgtattgcccattagtaaggacagctgatacacga 1846
||||| ||||| |||||||||||||||||||| ||||||||||||||||| || ||||||
Sbjct: 280 tagtgatcacaatcaagattcaacatgtattgtccattagtaaggacagccgagacacga 221
Query: 1847 acaagtgcattcatggcaccagccttcttgtgatgttggaatccaggacgtttttcacga 1906
||||| |||||||||||||||||||| ||||| || |||||||||||||| |||||||||
Sbjct: 220 acaagggcattcatggcaccagccttattgtggtgctggaatccaggacgcttttcacga 161
Query: 1907 gacacataaaccaaacg 1923
|||||||| ||||||||
Sbjct: 160 gacacatagaccaaacg 144
>gb|BI951084.1|BI951084 HVSMEl0024F09f Hordeum vulgare spike EST library HVcDNA0012 (Fusarium
infected) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEl0024F09f, mRNA sequence
Length = 900
Score = 391 bits (197), Expect = e-106
Identities = 374/433 (86%)
Strand = Plus / Minus
Query: 825 taatctttgggatgatgaacttcccagtgagaagacaaactgctggcaatatgcagtaca 884
|||||| ||| ||||||||||| |||||||| ||||| | ||| |||||||| || || |
Sbjct: 441 taatctctggcatgatgaactttccagtgagcagacagattgcaggcaatatacaataga 382
Query: 885 ggaggagcgggattgatgtgagtggataaattgttgtgttgatataagcaaatctctcca 944
|| ||||||| || || ||||| ||||| || |||||||| ||||| ||||||||||
Sbjct: 381 ctagaagcgggagagacgttagtgggtaaatggtggtgttgatgtaagcgaatctctcca 322
Query: 945 ggaatttaagccgacctccatagccataccatatgggacaatgcctgctgaaaagaattt 1004
|||| || || || ||||| ||||||||||||| ||| ||||||| ||||||||||||||
Sbjct: 321 ggaacttgaggcgccctccgtagccataccataaggggcaatgccggctgaaaagaattt 262
Query: 1005 caatggaaccaagagcccaccgaagcacttgattcaaacgatccgaaaggttgataggag 1064
||| |||||||||||||||||| |||||||| |||| |||||| ||||| ||||| || |
Sbjct: 261 caacggaaccaagagcccaccggagcacttggttcagacgatctgaaagattgatggggg 202
Query: 1065 cagatcccttgaaagctggtcgcttaggcatgcagtagattgatcgccagcctcgagcat 1124
||||||||||||||||||| |||||||||||||| |||| ||| |||||||||| || |
Sbjct: 201 cagatcccttgaaagctgggcgcttaggcatgcaatagactgaccgccagcctcttgcgt 142
Query: 1125 gcatcttgaatccggtgagaatgtcttctgtaacagaaccatagatccacccaatctcag 1184
||||||||||||| |||||||| |||||||| ||||| ||||| ||||| ||||||||||
Sbjct: 141 gcatcttgaatccagtgagaatatcttctgtgacagatccataaatccaaccaatctcag 82
Query: 1185 ttccccagtcagttttgtcctcatagccacagctgatgacatgaatagcttctttcagaa 1244
||||||| |||| ||||||||||||||||| || |||||||| ||||||||||||| ||
Sbjct: 81 ttccccactcagacttgtcctcatagccacaacttatgacatggatagcttctttcaaaa 22
Query: 1245 gagactctggagt 1257
|||| ||||||||
Sbjct: 21 gagattctggagt 9
Score = 71.9 bits (36), Expect = 1e-010
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 719 ttcctccaccattcatcaatgccaacaccactccacctcatctcaaggataccagtggca 778
||||||||| | || ||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 547 ttcctccacgactcgtcaatgccacacccactccacctcatctcaaggataccggtggca 488
Query: 779 aagattga 786
|| |||||
Sbjct: 487 aaaattga 480
>gb|CB883651.1|CB883651 HQ02O03w HQ Hordeum vulgare subsp. vulgare cDNA clone HQ02O03
3-PRIME, mRNA sequence
Length = 601
Score = 383 bits (193), Expect = e-104
Identities = 472/563 (83%), Gaps = 9/563 (1%)
Strand = Plus / Minus
Query: 2462 aaagccagtctatcaaggtatgtttcacggttgattggggaccactttgggaactgatcc 2521
|||||||||||||||||||| || || ||||||||||| ||||||| ||||||||||||
Sbjct: 601 aaagccagtctatcaaggtaggtctcccggttgattggaaaccacttcgggaactgatcc 542
Query: 2522 aaaatccaggacaaagcaaaccagatctcacatatgacggataaaagccacagtggatat 2581
| |||||||| ||||||||||| ||||||||||| || |||||||||||||| || |||
Sbjct: 541 agtatccaggataaagcaaaccaaatctcacatataacagataaaagccacagcgggtat 482
Query: 2582 gcattgttcacaggatgtgtgatacggtagcgcaagaatatgcatagaacagccaaacgt 2641
||||| |||||||| ||||| ||||||| ||| ||| |||| ||||||| |||| ||
Sbjct: 481 gcattacgcacaggatttgtgagacggtagtgcaggaagatgcttagaacaaccaaccgc 422
Query: 2642 agcacaatgaccattctgtacggatttattctggatgaaggaattggcacttttctagat 2701
|| ||||||||||||||||||||||||||| ||||||||| ||| || || |||||||||
Sbjct: 421 agaacaatgaccattctgtacggatttattttggatgaagcaatggggacctttctagat 362
Query: 2702 agaggttgccgagtttcatcattcagtaaggcatcttccatgttataatcagtagaagca 2761
||||| || |||||||||||||||||||| || ||||||||||| || |||||||| |||
Sbjct: 361 agaggctggcgagtttcatcattcagtaaagcgtcttccatgttgtattcagtagatgca 302
Query: 2762 tcaatatcagcaactccacgcccttctgatggagcaatgcttgttccattggtcatagga 2821
|| || |||| | || | || ||||| || |||||||||||||| ||||| ||||| |||
Sbjct: 301 tcgatgtcagtagctgcccgaccttcagagggagcaatgcttgtgccattagtcatggga 242
Query: 2822 attgcacctttatc---cttcattttccatccatccaccctctctttccatgcaacattg 2878
|||||||| || || |||||||||||| ||||| || ||||||||||| ||||||||
Sbjct: 241 attgcacccttgtcctgcttcattttccagccatcaactctctctttccaagcaacattc 182
Query: 2879 ccaaggctaccggagaactccctcgatgggtttggagaatgatttacataaggaaattga 2938
|||| || || ||||||||||| || || ||||| |||||||| || || || || ||
Sbjct: 181 ccaatactgccagagaactcccttgacggatttggtgaatgattcacgtaggggaacgga 122
Query: 2939 tgtccacgcctgccaatgttcccaacaggagacatcat---atgatcaggggaagctcca 2995
|||| |||| ||||||||| ||| |||||||| |||||||||||||||||||
Sbjct: 121 ---gcacgtctgctgatgttcccagtaggggacatcatatgatgatcaggggaagctcca 65
Query: 2996 ggaatctctcctgagatctggct 3018
|| || |||||||| ||||||||
Sbjct: 64 gggatttctcctgacatctggct 42
>gb|BG414971.1|BG414971 HVSMEk0004I03f Hordeum vulgare testa/pericarp EST library HVcDNA0013
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEk0004I03f, mRNA sequence
Length = 634
Score = 381 bits (192), Expect = e-103
Identities = 440/523 (84%)
Strand = Plus / Minus
Query: 482 ttgattgcgtaggaaatgccagcgaccacgccgaccaggttgatgatcaaaatagtggtt 541
||||| |||||||| | ||||| || || ||||||| ||| |||||||| || || ||
Sbjct: 523 ttgatggcgtaggaggtaccagcaacgacaccgaccatgttaatgatcaagatggtcgtc 464
Query: 542 ggtgggatcagaagcgttgtccacttgaacatgtagagctcggcaaaatcaccttcttcg 601
|| ||||| |||||||| ||||||||||||||||||||||| ||| | || |||||||||
Sbjct: 463 ggagggatgagaagcgtcgtccacttgaacatgtagagctcagcanagtcgccttcttcg 404
Query: 602 tcagtggccttagaggtgacagtgaagctcgtgtcgataccagcaagcaccttcaggaga 661
||| | ||||| ||||||||||||||| | ||||||||||| |||||||||||||| |||
Sbjct: 403 tcattagcctttgaggtgacagtgaagttggtgtcgataccggcaagcaccttcagaaga 344
Query: 662 ccctggaagacggcaaataaatgcgcagaaataccaccaatgacccagaactgctcgttc 721
||||| ||||||||||| | ||| ||||| ||||| ||||||||||||||||| || |||
Sbjct: 343 ccctgaaagacggcaaacagatgggcagagatacctccaatgacccagaactgttcattc 284
Query: 722 ctccaccattcatcaatgccaacaccactccacctcatctcaaggataccagtggcaaag 781
|||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 283 ctccaccactcgtcaatgccaacaccactccacctcatctcaaggataccggtggcaaaa 224
Query: 782 attgagataaagagcgatataaaccaaacactctctaggttactaatctttgggatgatg 841
||||| | ||||| | || ||||| | ||| | | ||| ||||||| ||| ||||||
Sbjct: 223 attgaaaggaagagagcaatgaaccagatactggccaagttgctaatctctggcatgatg 164
Query: 842 aacttcccagtgagaagacaaactgctggcaatatgcagtacaggaggagcgggattgat 901
||||| |||||||| ||||| | ||| |||||||| || || | || ||||||| ||
Sbjct: 163 aactttccagtgagcagacagattgcaggcaatatacaatagactagaagcgggagagac 104
Query: 902 gtgagtggataaattgttgtgttgatataagcaaatctctccaggaatttaagccgacct 961
|| ||||| ||||| || |||||||| ||||| |||||||||||||| || || || |||
Sbjct: 103 gttagtgggtaaatggtggtgttgatgtaagcgaatctctccaggaacttgaggcgccct 44
Query: 962 ccatagccataccatatgggacaatgcctgctgaaaagaattt 1004
|| ||||||||||||| ||| ||||||| ||||||||||||||
Sbjct: 43 ccgtagccataccataaggggcaatgccggctgaaaagaattt 1
>gb|AV913277.1|AV913277 AV913277 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags21i03 5', mRNA sequence
Length = 631
Score = 367 bits (185), Expect = 2e-099
Identities = 374/437 (85%)
Strand = Plus / Minus
Query: 293 gtgaatggatcgatacgaacccacatcagggaaaagatcgacgcaaggaggatagcccag 352
||||||||||| | ||||||||||| || ||| ||||| || || ||||||| |||||||
Sbjct: 452 gtgaatggatcaacacgaacccacagcaaggagaagattgaagccaggaggacagcccag 393
Query: 353 acaacgacaatggtcggcgtgcggttctgcttccccatgaggcccttgaggaaggggtac 412
|| | |||||| ||||| |||||||| ||| | ||||| || |||||||||||||||||
Sbjct: 392 acgatgacaatcgtcggtgtgcggttttgcctgcccataagacccttgaggaaggggtat 333
Query: 413 aggtggacaatcacccagaacgcaaagaagagcttcccgaaaagaggtccccatgactgg 472
| ||| |||||||||||||| |||||||||||||||||||| || || ||||| || |||
Sbjct: 332 aagtgaacaatcacccagaaggcaaagaagagcttcccgaagagcggcccccaagattgg 273
Query: 473 taaccgctattgattgcgtaggaaatgccagcgaccacgccgaccaggttgatgatcaaa 532
||||| || ||||| |||||||| | ||||| || || ||||||| ||| ||||||||
Sbjct: 272 taaccactgttgatggcgtaggaggtaccagcaacgacaccgaccatgttaatgatcaag 213
Query: 533 atagtggttggtgggatcagaagcgttgtccacttgaacatgtagagctcggcaaaatca 592
|| || || || ||||| |||||||| ||||||||||||||||||||||| ||||| ||
Sbjct: 212 atggtcgtcggagggatgagaagcgtcgtccacttgaacatgtagagctcagcaaagtcg 153
Query: 593 ccttcttcgtcagtggccttagaggtgacagtgaagctcgtgtcgataccagcaagcacc 652
|||||||||||| | ||||| ||||||||||||||| | ||||||||||| |||||||||
Sbjct: 152 ccttcttcgtcattagcctttgaggtgacagtgaagttggtgtcgataccggcaagcacc 93
Query: 653 ttcaggagaccctggaagacggcaaataaatgcgcagaaataccaccaatgacccagaac 712
||||| |||||||| ||||||||||| | ||| ||||| ||||| |||||||||||||||
Sbjct: 92 ttcagaagaccctgaaagacggcaaacagatgggcagagatacctccaatgacccagaac 33
Query: 713 tgctcgttcctccacca 729
|| || |||||||||||
Sbjct: 32 tgttcattcctccacca 16
>gb|AV913278.1|AV913278 AV913278 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags21i04 5', mRNA sequence
Length = 604
Score = 367 bits (185), Expect = 2e-099
Identities = 374/437 (85%)
Strand = Plus / Minus
Query: 293 gtgaatggatcgatacgaacccacatcagggaaaagatcgacgcaaggaggatagcccag 352
||||||||||| | ||||||||||| || ||| ||||| || || ||||||| |||||||
Sbjct: 451 gtgaatggatcaacacgaacccacagcaaggagaagattgaagccaggaggacagcccag 392
Query: 353 acaacgacaatggtcggcgtgcggttctgcttccccatgaggcccttgaggaaggggtac 412
|| | |||||| ||||| |||||||| ||| | ||||| || |||||||||||||||||
Sbjct: 391 acgatgacaatcgtcggtgtgcggttttgcctgcccataagacccttgaggaaggggtat 332
Query: 413 aggtggacaatcacccagaacgcaaagaagagcttcccgaaaagaggtccccatgactgg 472
| ||| |||||||||||||| |||||||||||||||||||| || || ||||| || |||
Sbjct: 331 aagtgaacaatcacccagaaggcaaagaagagcttcccgaagagcggcccccaagattgg 272
Query: 473 taaccgctattgattgcgtaggaaatgccagcgaccacgccgaccaggttgatgatcaaa 532
||||| || ||||| |||||||| | ||||| || || ||||||| ||| ||||||||
Sbjct: 271 taaccactgttgatggcgtaggaggtaccagcaacgacaccgaccatgttaatgatcaag 212
Query: 533 atagtggttggtgggatcagaagcgttgtccacttgaacatgtagagctcggcaaaatca 592
|| || || || ||||| |||||||| ||||||||||||||||||||||| ||||| ||
Sbjct: 211 atggtcgtcggagggatgagaagcgtcgtccacttgaacatgtagagctcagcaaagtcg 152
Query: 593 ccttcttcgtcagtggccttagaggtgacagtgaagctcgtgtcgataccagcaagcacc 652
|||||||||||| | ||||| ||||||||||||||| | ||||||||||| |||||||||
Sbjct: 151 ccttcttcgtcattagcctttgaggtgacagtgaagttggtgtcgataccggcaagcacc 92
Query: 653 ttcaggagaccctggaagacggcaaataaatgcgcagaaataccaccaatgacccagaac 712
||||| |||||||| ||||||||||| | ||| ||||| ||||| |||||||||||||||
Sbjct: 91 ttcagaagaccctgaaagacggcaaacagatgggcagagatacctccaatgacccagaac 32
Query: 713 tgctcgttcctccacca 729
|| || |||||||||||
Sbjct: 31 tgttcattcctccacca 15
>gb|BQ465284.1|BQ465284 HU03C22r HU Hordeum vulgare subsp. vulgare cDNA clone HU03C22
5-PRIME, mRNA sequence
Length = 643
Score = 367 bits (185), Expect = 2e-099
Identities = 374/437 (85%)
Strand = Plus / Minus
Query: 293 gtgaatggatcgatacgaacccacatcagggaaaagatcgacgcaaggaggatagcccag 352
||||||||||| | ||||||||||| || ||| ||||| || || ||||||| |||||||
Sbjct: 450 gtgaatggatcaacacgaacccacagcaaggagaagattgaagccaggaggacagcccag 391
Query: 353 acaacgacaatggtcggcgtgcggttctgcttccccatgaggcccttgaggaaggggtac 412
|| | |||||| ||||| |||||||| ||| | ||||| || |||||||||||||||||
Sbjct: 390 acgatgacaatcgtcggtgtgcggttttgcctgcccataagacccttgaggaaggggtat 331
Query: 413 aggtggacaatcacccagaacgcaaagaagagcttcccgaaaagaggtccccatgactgg 472
| ||| |||||||||||||| |||||||||||||||||||| || || ||||| || |||
Sbjct: 330 aagtgaacaatcacccagaaggcaaagaagagcttcccgaagagcggcccccaagattgg 271
Query: 473 taaccgctattgattgcgtaggaaatgccagcgaccacgccgaccaggttgatgatcaaa 532
||||| || ||||| |||||||| | ||||| || || ||||||| ||| ||||||||
Sbjct: 270 taaccactgttgatggcgtaggaggtaccagcaacgacaccgaccatgttaatgatcaag 211
Query: 533 atagtggttggtgggatcagaagcgttgtccacttgaacatgtagagctcggcaaaatca 592
|| || || || ||||| |||||||| ||||||||||||||||||||||| ||||| ||
Sbjct: 210 atggtcgtcggagggatgagaagcgtcgtccacttgaacatgtagagctcagcaaagtcg 151
Query: 593 ccttcttcgtcagtggccttagaggtgacagtgaagctcgtgtcgataccagcaagcacc 652
|||||||||||| | ||||| ||||||||||||||| | ||||||||||| |||||||||
Sbjct: 150 ccttcttcgtcattagcctttgaggtgacagtgaagttggtgtcgataccggcaagcacc 91
Query: 653 ttcaggagaccctggaagacggcaaataaatgcgcagaaataccaccaatgacccagaac 712
||||| |||||||| ||||||||||| | ||| ||||| ||||| |||||||||||||||
Sbjct: 90 ttcagaagaccctgaaagacggcaaacagatgggcagagatacctccaatgacccagaac 31
Query: 713 tgctcgttcctccacca 729
|| || |||||||||||
Sbjct: 30 tgttcattcctccacca 14
>gb|BU995821.1|BU995821 HM11H13r HM Hordeum vulgare subsp. vulgare cDNA clone HM11H13
5-PRIME, mRNA sequence
Length = 591
Score = 365 bits (184), Expect = 7e-099
Identities = 361/420 (85%)
Strand = Plus / Minus
Query: 1015 aagagcccaccgaagcacttgattcaaacgatccgaaaggttgataggagcagatccctt 1074
|||||||||||| |||||||| |||| |||||| ||||| ||||| || |||||||||||
Sbjct: 591 aagagcccaccggagcacttggttcagacgatctgaaagattgatgggggcagatccctt 532
Query: 1075 gaaagctggtcgcttaggcatgcagtagattgatcgccagcctcgagcatgcatcttgaa 1134
||||||||| |||||||||||||| |||| ||| |||||||||| || |||||||||||
Sbjct: 531 gaaagctgggcgcttaggcatgcaatagactgaccgccagcctcttgcgtgcatcttgaa 472
Query: 1135 tccggtgagaatgtcttctgtaacagaaccatagatccacccaatctcagttccccagtc 1194
||| |||||||| |||||||| ||||| ||||| ||||| ||||||||||||||||| ||
Sbjct: 471 tccagtgagaatatcttctgtgacagatccataaatccaaccaatctcagttccccactc 412
Query: 1195 agttttgtcctcatagccacagctgatgacatgaatagcttctttcagaagagactctgg 1254
|| ||||||||||||||||| || |||||||| ||||||||||||| |||||| |||||
Sbjct: 411 agacttgtcctcatagccacaacttatgacatggatagcttctttcaaaagagattctgg 352
Query: 1255 agttgcagattgtggaacaccgccatattccatcagagtagaggctacaaaaacactgga 1314
||| | || || |||||||| ||||||||||||||||| ||||| ||||| | ||
Sbjct: 351 agtggaggactgaggaacaccaccatattccatcagagtggaggcaacaaatgctgctga 292
Query: 1315 ctggccaaatctcttctccaagctcatttgagacataatcagcgatttctcatcatcaaa 1374
|||||||||||||||||| ||||||||||||||||| | | |||||||||||||||||
Sbjct: 291 ctggccaaatctcttctctaagctcatttgagacatgagaactgatttctcatcatcaaa 232
Query: 1375 ctgagaaccttcaatcccttcctctatatcttcgagattaaatactggtacagaactgtc 1434
| || |||||||| || |||||||| ||||| ||||| || ||||| |||||||||||
Sbjct: 231 cccagcaccttcaacaccctcctctatgtcttcaagattgaacactggaacagaactgtc 172
Score = 54.0 bits (27), Expect = 3e-005
Identities = 43/47 (91%), Gaps = 1/47 (2%)
Strand = Plus / Minus
Query: 1547 tcataaccatataaggccgttctgttaaacacacaaccagttcccac 1593
||||||||||| | |||||||||||||| |||||||||||||||||
Sbjct: 56 tcataaccatagatagccgttctgttaaa-acacaaccagttcccac 11
>gb|CA009005.1|CA009005 HU12N24r HU Hordeum vulgare subsp. vulgare cDNA clone HU12N24
5-PRIME, mRNA sequence
Length = 334
Score = 361 bits (182), Expect = 1e-097
Identities = 290/326 (88%)
Strand = Plus / Minus
Query: 985 atgcctgctgaaaagaatttcaatggaaccaagagcccaccgaagcacttgattcaaacg 1044
|||||| |||||||||||||| | |||||||| |||||||||||||||||||||| |||
Sbjct: 334 atgcctactgaaaagaatttccactgaaccaagcgcccaccgaagcacttgattcagacg 275
Query: 1045 atccgaaaggttgataggagcagatcccttgaaagctggtcgcttaggcatgcagtagat 1104
||| |||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 274 atctgaaaggttgataggggcagagcccttgaaagctggtcgcttaggcatacagtagat 215
Query: 1105 tgatcgccagcctcgagcatgcatcttgaatccggtgagaatgtcttctgtaacagaacc 1164
||| |||||||| || |||||||||||||| || || ||||| ||||| |||||||||||
Sbjct: 214 tgaccgccagccacgtgcatgcatcttgaacccagtaagaatatcttccgtaacagaacc 155
Query: 1165 atagatccacccaatctcagttccccagtcagttttgtcctcatagccacagctgatgac 1224
|||||||| |||||||| ||||||| ||| || ||||||||| |||||||| |||||
Sbjct: 154 gtagatccagccaatctcccttccccaatcacttcggtcctcataaccacagctaatgac 95
Query: 1225 atgaatagcttctttcagaagagactctggagttgcagattgtggaacaccgccatattc 1284
||| || |||||||||||||||||||||||||||||||| || || ||||| ||||||||
Sbjct: 94 atggattgcttctttcagaagagactctggagttgcagactgaggcacaccaccatattc 35
Query: 1285 catcagagtagaggctacaaaaacac 1310
||||||||| |||||||| |||||||
Sbjct: 34 catcagagtggaggctacgaaaacac 9
>gb|AV930906.1|AV930906 AV930906 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd25l19 3', mRNA sequence
Length = 505
Score = 351 bits (177), Expect = 1e-094
Identities = 354/413 (85%)
Strand = Plus / Plus
Query: 242 tcctagcagttgatgccacatttcgcgatatcaggaccagtgacccgggtggtgaatgga 301
|||||||||||||||||||| | |||||| || |||||||| || |||||||| ||
Sbjct: 93 tcctagcagttgatgccacacatttggatatctggcccagtgactcgtgtggtgaacggg 152
Query: 302 tcgatacgaacccacatcagggaaaagatcgacgcaaggaggatagcccagacaacgaca 361
||||| |||||||||| || ||| ||||| || ||||| ||||| |||||||| || ||
Sbjct: 153 tcgatgcgaacccacagcaaggagaagatggatgcaagaaggatggcccagacgacaacg 212
Query: 362 atggtcggcgtgcggttctgcttccccatgaggcccttgaggaaggggtacaggtggaca 421
||||||||||||||||||||| ||||| || ||||||||||| ||||||| ||||| |
Sbjct: 213 atggtcggcgtgcggttctgccgtcccattagccccttgaggaatgggtacaagtggata 272
Query: 422 atcacccagaacgcaaagaagagcttcccgaaaagaggtccccatgactggtaaccgcta 481
||||||||||| ||||||||||||||||||||||| |||||||||||||| || |||||
Sbjct: 273 atcacccagaaggcaaagaagagcttcccgaaaagcggtccccatgactgatagccgctg 332
Query: 482 ttgattgcgtaggaaatgccagcgaccacgccgaccaggttgatgatcaaaatagtggtt 541
||||| |||||||| | ||||| || || ||||| |||||||||||||| ||||| |||
Sbjct: 333 ttgatcgcgtaggaggtaccagccacaacaccgacaaggttgatgatcaagatagttgtt 392
Query: 542 ggtgggatcagaagcgttgtccacttgaacatgtagagctcggcaaaatcaccttcttcg 601
|||||||||||||| || ||||||||||||||||||||||||||||||||| ||||||
Sbjct: 393 ggtgggatcagaagagtcgtccacttgaacatgtagagctcggcaaaatcattatcttcg 452
Query: 602 tcagtggccttagaggtgacagtgaagctcgtgtcgataccagcaagcacctt 654
|| | || || || |||||||||||||| |||||||| |||||||| |||||
Sbjct: 453 tcggatgcttttgaagtgacagtgaagctggtgtcgatgccagcaagtacctt 505
>gb|BQ471177.1|BQ471177 HV01F24T HV Hordeum vulgare subsp. vulgare cDNA clone HV01F24
5-PRIME, mRNA sequence
Length = 625
Score = 351 bits (177), Expect = 1e-094
Identities = 474/571 (83%), Gaps = 9/571 (1%)
Strand = Plus / Minus
Query: 2505 actttgggaactgatccaaaatccaggacaaagcaaaccagatctcacatatgacggata 2564
|||| ||||||||||||| |||||||| ||||||||||| ||||||||||| || ||||
Sbjct: 625 acttcgggaactgatccagtatccaggataaagcaaaccaaatctcacatataacagata 566
Query: 2565 aaagccacagtggatatgcattgttcacaggatgtgtgatacggtagcgcaagaatatgc 2624
|||||||||| || |||||||| |||||||| ||||| ||||||| ||| ||| ||||
Sbjct: 565 aaagccacagcgggtatgcattacgcacaggatttgtgagacggtagtgcaggaagatgc 506
Query: 2625 atagaacagccaaacgtagcacaatgaccattctgtacggatttattctggatgaaggaa 2684
||||||| |||| || || ||||||||||||||||||||||||||| ||||||||| ||
Sbjct: 505 ttagaacaaccaaccgcagaacaatgaccattctgtacggatttattttggatgaagcaa 446
Query: 2685 ttggcacttttctagatagaggttgccgagtttcatcattcagtaaggcatcttccatgt 2744
| || || |||||||||||||| || |||||||||||||||||||| || ||||||||||
Sbjct: 445 tggggacctttctagatagaggctggcgagtttcatcattcagtaaagcgtcttccatgt 386
Query: 2745 tataatcagtagaagcatcaatatcagcaactccacgcccttctgatggagcaatgcttg 2804
| || |||||||| ||||| || |||| | || | || ||||| || |||||||||||||
Sbjct: 385 tgtattcagtagatgcatcgatgtcagtagctgcccgaccttcagagggagcaatgcttg 326
Query: 2805 ttccattggtcataggaattgcacctttatc---cttcattttccatccatccaccctct 2861
| ||||| ||||| ||||||||||| || || |||||||||||| ||||| || ||||
Sbjct: 325 tgccattagtcatgggaattgcacccttgtcctgcttcattttccagccatcaactctct 266
Query: 2862 ctttccatgcaacattgccaaggctaccggagaactccctcgatgggtttggagaatgat 2921
||||||| |||||||| |||| || || ||||||||||| || || ||||| |||||||
Sbjct: 265 ctttccaagcaacattcccaatactgccagagaactcccttgacggatttggtgaatgat 206
Query: 2922 ttacataaggaaattgatgtccacgcctgccaatgttcccaacaggagacatcat---at 2978
| || || || || || |||| |||| ||||||||| ||| |||||||| ||
Sbjct: 205 tcacgtaggggaacgga---gcacgtctgctgatgttcccagtaggggacatcatatgat 149
Query: 2979 gatcaggggaagctccaggaatctctcctgagatctggctatgagttagtgacgggatat 3038
||||||||||||||||||| || |||||||| |||||||| | ||| | ||| |||| |
Sbjct: 148 gatcaggggaagctccagggatttctcctgacatctggctgttagtgactgaagggacgt 89
Query: 3039 atccacgagggatctcaccactgtcatactt 3069
|||| | ||||||||| |||||||| |||||
Sbjct: 88 atcccctagggatctctccactgtcgtactt 58
>gb|CA019265.1|CA019265 HV11G20r HV Hordeum vulgare subsp. vulgare cDNA clone HV11G20
5-PRIME, mRNA sequence
Length = 579
Score = 335 bits (169), Expect = 6e-090
Identities = 457/551 (82%), Gaps = 9/551 (1%)
Strand = Plus / Minus
Query: 2525 atccaggacaaagcaaaccagatctcacatatgacggataaaagccacagtggatatgca 2584
|||||||| ||||||||||| ||||||||||| || |||||||||||||| || ||||||
Sbjct: 574 atccaggataaagcaaaccaaatctcacatataacagataaaagccacagcgggtatgca 515
Query: 2585 ttgttcacaggatgtgtgatacggtagcgcaagaatatgcatagaacagccaaacgtagc 2644
|| |||||||| ||||| ||||||| ||| ||| |||| ||||||| |||| || ||
Sbjct: 514 ttacgcacaggatttgtgagacggtagtgcaggaagatgcttagaacaaccaaccgcaga 455
Query: 2645 acaatgaccattctgtacggatttattctggatgaaggaattggcacttttctagataga 2704
||||||||||||||||||||||||||| ||||||||| ||| || || ||||||||||||
Sbjct: 454 acaatgaccattctgtacggatttattttggatgaagcaatggggacctttctagataga 395
Query: 2705 ggttgccgagtttcatcattcagtaaggcatcttccatgttataatcagtagaagcatca 2764
|| || |||||||||||||||||||| || ||||||||||| || |||||||| |||||
Sbjct: 394 ggctggcgagtttcatcattcagtaaagcgtcttccatgttgtattcagtagatgcatcg 335
Query: 2765 atatcagcaactccacgcccttctgatggagcaatgcttgttccattggtcataggaatt 2824
|| |||| | || | || ||||| || |||||||||||||| ||||| ||||| ||||||
Sbjct: 334 atgtcagtagctgcccgaccttcagagggagcaatgcttgtgccattagtcatgggaatt 275
Query: 2825 gcacctttatc---cttcattttccatccatccaccctctctttccatgcaacattgcca 2881
||||| || || |||||||||||| ||||| || ||||||||||| |||||||| |||
Sbjct: 274 gcacccttgtcctgcttcattttccagccatcaactctctctttccaagcaacattccca 215
Query: 2882 aggctaccggagaactccctcgatgggtttggagaatgatttacataaggaaattgatgt 2941
| || || ||||||||||| || || ||||| |||||||| || || || || ||
Sbjct: 214 atactgccagagaactcccttgacggatttggtgaatgattcacgtaggggaacgga--- 158
Query: 2942 ccacgcctgccaatgttcccaacaggagacatcat---atgatcaggggaagctccagga 2998
|||| |||| ||||||||| ||| |||||||| |||||||||||||||||||||
Sbjct: 157 gcacgtctgctgatgttcccagtaggggacatcatatgatgatcaggggaagctccaggg 98
Query: 2999 atctctcctgagatctggctatgagttagtgacgggatatatccacgagggatctcacca 3058
|| |||||||| |||||||| | ||| | ||| |||| ||||| | ||||||||| |||
Sbjct: 97 atttctcctgacatctggctgttagtgactgaagggacgtatcccctagggatctctcca 38
Query: 3059 ctgtcatactt 3069
||||| |||||
Sbjct: 37 ctgtcgtactt 27
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 361,188
Number of Sequences: 312970
Number of extensions: 361188
Number of successful extensions: 100392
Number of sequences better than 0.5: 180
Number of HSP's better than 0.5 without gapping: 179
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 99863
Number of HSP's gapped (non-prelim): 425
length of query: 3727
length of database: 175,134,539
effective HSP length: 20
effective length of query: 3707
effective length of database: 168,875,139
effective search space: 626020140273
effective search space used: 626020140273
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)