BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2405118.2.1
(1669 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BE558428.1|BE558428 HV_CEb0017J24f Hordeum vulgare seedl... 654 0.0
gb|BI957446.1|BI957446 HVSMEn0009J16f Hordeum vulgare rachi... 646 0.0
gb|BU995195.1|BU995195 HM09I05r HM Hordeum vulgare subsp. v... 642 0.0
gb|BE214468.1|BE214468 HV_CEb0003I17f Hordeum vulgare seedl... 626 e-178
gb|BE194442.1|BE194442 HVSMEh0085I24f Hordeum vulgare 5-45 ... 607 e-172
gb|AL507638.1|AL507638 AL507638 Hordeum vulgare Barke devel... 579 e-163
gb|BE216591.1|BE216591 HV_CEb0010O10f Hordeum vulgare seedl... 573 e-162
gb|BQ763191.1|BQ763191 EBro02_SQ007_C15_R root, 3 week, hyd... 549 e-154
gb|CK123411.1|CK123411 BES1824103p14 BES1824 Hordeum vulgar... 515 e-144
gb|BQ469466.1|BQ469466 HM04O09r HM Hordeum vulgare subsp. v... 509 e-143
gb|BF260353.3|BF260353 HVSMEf0021M09f Hordeum vulgare seedl... 505 e-141
gb|BQ467847.1|BQ467847 HR01B24r HR Hordeum vulgare subsp. v... 502 e-140
gb|BQ660971.1|BQ660971 HM01F04w HM Hordeum vulgare subsp. v... 492 e-137
gb|CB881341.1|CB881341 HM09I05w HM Hordeum vulgare subsp. v... 492 e-137
gb|BM373958.2|BM373958 EBma03_SQ003_D14_R maternal, 8 DPA, ... 484 e-135
gb|AL506219.1|AL506219 AL506219 Hordeum vulgare Barke devel... 480 e-134
gb|BE455755.3|BE455755 HVSMEg0019K10f Hordeum vulgare pre-a... 478 e-133
gb|BF065565.1|BF065565 HV_CEb0012M15f Hordeum vulgare seedl... 462 e-128
gb|CA019762.1|CA019762 HV13A16r HV Hordeum vulgare subsp. v... 446 e-123
gb|BI958350.1|BI958350 HVSMEn0014I18f Hordeum vulgare rachi... 440 e-122
gb|BQ468460.1|BQ468460 HM01F04T HM Hordeum vulgare subsp. v... 422 e-116
gb|BU995486.1|BU995486 HM10G11r HM Hordeum vulgare subsp. v... 416 e-114
gb|BU997581.1|BU997581 HI08G13r HI Hordeum vulgare subsp. v... 414 e-114
gb|CB858813.1|CB858813 HI08G13w HI Hordeum vulgare subsp. v... 402 e-110
gb|BQ661428.1|BQ661428 HM03H06u HM Hordeum vulgare subsp. v... 400 e-110
gb|CB881629.1|CB881629 HM10G11w HM Hordeum vulgare subsp. v... 400 e-110
gb|BI957209.1|BI957209 HVSMEn0008C08f Hordeum vulgare rachi... 394 e-108
gb|BI957127.1|BI957127 HVSMEn0007J20f Hordeum vulgare rachi... 391 e-107
gb|BI957159.1|BI957159 HVSMEn0007N14f Hordeum vulgare rachi... 367 e-100
gb|BQ760493.1|BQ760493 EBro02_SQ005_D11_R root, 3 week, hyd... 359 2e-097
gb|AL510922.1|AL510922 AL510922 Hordeum vulgare Barke devel... 329 2e-088
gb|BQ661689.1|BQ661689 HM04O09u HM Hordeum vulgare subsp. v... 313 1e-083
gb|CK124014.1|CK124014 BES1824106h23 BES1824 Hordeum vulgar... 309 2e-082
gb|BQ758620.1|BQ758620 EBma07_SQ002_F09_R maternal, 21 DPA,... 293 1e-077
gb|BI951294.1|BI951294 HVSMEl0025G15f Hordeum vulgare spike... 289 1e-076
gb|AL507629.1|AL507629 AL507629 Hordeum vulgare Barke devel... 281 4e-074
gb|BF617661.3|BF617661 HVSMEc0018J01f Hordeum vulgare seedl... 236 2e-060
gb|AL509635.1|AL509635 AL509635 Hordeum vulgare Barke devel... 228 5e-058
gb|BM096821.2|BM096821 EBma07_SQ001_M10_R maternal, 21 DPA,... 198 4e-049
gb|BQ763215.1|BQ763215 EBro02_SQ007_H14_R root, 3 week, hyd... 180 1e-043
gb|BE602616.3|BE602616 HVSMEh0100I13f Hordeum vulgare 5-45 ... 123 2e-026
gb|BQ661990.1|BQ661990 HR01B24u HR Hordeum vulgare subsp. v... 117 1e-024
gb|BM097022.2|BM097022 EBpi07_SQ002_C11_R pistil, 12 DPA, n... 100 3e-019
gb|BE213985.3|BE213985 HV_CEb0001N07f Hordeum vulgare seedl... 78 1e-012
gb|AV917273.1|AV917273 AV917273 K. Sato unpublished cDNA li... 76 4e-012
gb|AV922443.1|AV922443 AV922443 K. Sato unpublished cDNA li... 76 4e-012
gb|CB879610.1|CB879610 HP02P10w HP Hordeum vulgare subsp. v... 76 4e-012
gb|BI949722.1|BI949722 HVSMEl0015I24f Hordeum vulgare spike... 62 6e-008
gb|BG310264.2|BG310264 HVSMEc0016L11f Hordeum vulgare seedl... 62 6e-008
gb|BF257150.3|BF257150 HVSMEf0012A06f Hordeum vulgare seedl... 62 6e-008
gb|AV913778.1|AV913778 AV913778 K. Sato unpublished cDNA li... 62 6e-008
gb|AV916085.1|AV916085 AV916085 K. Sato unpublished cDNA li... 62 6e-008
gb|AV921205.1|AV921205 AV921205 K. Sato unpublished cDNA li... 62 6e-008
gb|AV921385.1|AV921385 AV921385 K. Sato unpublished cDNA li... 62 6e-008
gb|BQ467844.1|BQ467844 HR01B18r HR Hordeum vulgare subsp. v... 62 6e-008
gb|CA001190.1|CA001190 HS05A02u HS Hordeum vulgare subsp. v... 62 6e-008
gb|BF254987.2|BF254987 HVSMEf0005J24f Hordeum vulgare seedl... 60 2e-007
gb|BF257384.2|BF257384 HVSMEf0012L22f Hordeum vulgare seedl... 60 2e-007
gb|BI951701.1|BI951701 HVSMEm0002B16f Hordeum vulgare green... 60 2e-007
gb|BI957691.1|BI957691 HVSMEn0010L07f Hordeum vulgare rachi... 60 2e-007
gb|BE559002.2|BE559002 HV_CEb0022D12f Hordeum vulgare seedl... 60 2e-007
gb|BQ761570.1|BQ761570 EBem10_SQ001_K03_R embryo, 2 Day ger... 60 2e-007
gb|AL503387.1|AL503387 AL503387 Hordeum vulgare Barke roots... 54 2e-005
gb|BF623534.2|BF623534 HVSMEa0002J16f Hordeum vulgare seedl... 54 2e-005
gb|BF623721.2|BF623721 HVSMEa0005C09f Hordeum vulgare seedl... 54 2e-005
gb|BF623988.2|BF623988 HVSMEa0008F16f Hordeum vulgare seedl... 54 2e-005
gb|BF623160.2|BF623160 HVSMEa0014P12f Hordeum vulgare seedl... 54 2e-005
gb|BI960471.1|BI960471 HVSMEn0024L10f Hordeum vulgare rachi... 54 2e-005
gb|BI960551.1|BI960551 HVSMEn0025A03f Hordeum vulgare rachi... 54 2e-005
gb|BE454565.3|BE454565 HVSMEh0094E10f Hordeum vulgare 5-45 ... 54 2e-005
gb|BJ447263.1|BJ447263 BJ447263 K. Sato unpublished cDNA li... 54 2e-005
gb|BJ454765.1|BJ454765 BJ454765 K. Sato unpublished cDNA li... 54 2e-005
gb|BM368384.2|BM368384 EBed01_SQ002_P23_R endosperm, 6 DPA,... 54 2e-005
gb|BM443343.2|BM443343 EBro02_SQ003_K20_R root, 3 week, hyd... 54 2e-005
gb|BM370236.2|BM370236 EBro08_SQ003_H20_R root, 3 week, dro... 54 2e-005
gb|BQ768318.1|BQ768318 EBro08_SQ011_J10_R root, 3 week, dro... 54 2e-005
gb|CA010065.1|CA010065 HT11L08u HT Hordeum vulgare subsp. v... 54 2e-005
gb|CA014567.1|CA014567 HT11L08r HT Hordeum vulgare subsp. v... 54 2e-005
gb|CB878272.1|CB878272 HP07O19T HP Hordeum vulgare subsp. v... 54 2e-005
gb|AL450716.1|AL450716 AL450716 Hordeum vulgare Barke etiol... 52 6e-005
gb|AL501883.1|AL501883 AL501883 Hordeum vulgare Barke roots... 52 6e-005
gb|BF624454.2|BF624454 HVSMEa0016F14f Hordeum vulgare seedl... 52 6e-005
gb|BG299988.1|BG299988 HVSMEa0022N15f Hordeum vulgare seedl... 52 6e-005
gb|BF627817.2|BF627817 HVSMEb0005O02f Hordeum vulgare seedl... 52 6e-005
gb|BF628744.2|BF628744 HVSMEb0007K23f Hordeum vulgare seedl... 52 6e-005
gb|BF630114.2|BF630114 HVSMEb0008A03f Hordeum vulgare seedl... 52 6e-005
gb|BI957762.1|BI957762 HVSMEn0011B06f Hordeum vulgare rachi... 52 6e-005
gb|BI777594.2|BI777594 EBro04_SQ001_L05_R root, 3 week, sal... 52 6e-005
gb|BI777453.2|BI777453 EBro04_SQ001_E09_R root, 3 week, sal... 52 6e-005
gb|CB877686.1|CB877686 HP05N08T HP Hordeum vulgare subsp. v... 52 6e-005
gb|AL504577.1|AL504577 AL504577 Hordeum vulgare Barke roots... 48 0.001
gb|BF620007.2|BF620007 HVSMEc0009P20f Hordeum vulgare seedl... 48 0.001
gb|AL504684.1|AL504684 AL504684 Hordeum vulgare Barke roots... 46 0.004
gb|BQ467546.1|BQ467546 HS04C02r HS Hordeum vulgare subsp. v... 46 0.004
gb|CX662371.1|CX662371 EST 159 Expressed sequences from Bar... 46 0.004
gb|AL500806.1|AL500806 AL500806 Hordeum vulgare Barke roots... 44 0.015
gb|AL510227.1|AL510227 AL510227 Hordeum vulgare Barke devel... 44 0.015
gb|BG299533.1|BG299533 HVSMEa0020J23f Hordeum vulgare seedl... 44 0.015
gb|BF616628.3|BF616628 HVSMEc0010N21f Hordeum vulgare seedl... 44 0.015
gb|BF620700.3|BF620700 HVSMEc0020J23f Hordeum vulgare seedl... 44 0.015
gb|BE214044.2|BE214044 HV_CEb0001P23f Hordeum vulgare seedl... 44 0.015
gb|BQ467311.1|BQ467311 HS03F21r HS Hordeum vulgare subsp. v... 44 0.015
gb|BM368074.2|BM368074 EBed01_SQ002_B12_R endosperm, 6 DPA,... 44 0.015
gb|BM376461.2|BM376461 EBem05_SQ002_F07_R embryo, 14 DPA, n... 44 0.015
gb|BU999120.1|BU999120 HI13F05r HI Hordeum vulgare subsp. v... 44 0.015
gb|AL508480.1|AL508480 AL508480 Hordeum vulgare Barke devel... 42 0.058
gb|AV832545.1|AV832545 AV832545 K. Sato unpublished cDNA li... 42 0.058
gb|AV836836.1|AV836836 AV836836 K. Sato unpublished cDNA li... 42 0.058
gb|BG300015.1|BG300015 HVSMEa0022P19f Hordeum vulgare seedl... 42 0.058
gb|BI947283.1|BI947283 HVSMEl0005A06f Hordeum vulgare spike... 42 0.058
gb|BI950483.1|BI950483 HVSMEl0020O11f Hordeum vulgare spike... 42 0.058
gb|BI959387.1|BI959387 HVSMEn0019H17f Hordeum vulgare rachi... 42 0.058
gb|BQ458310.1|BQ458310 HA05J23r HA Hordeum vulgare subsp. v... 42 0.058
gb|BM099579.2|BM099579 EBes01_SQ003_K13_R embryo sac, 4-6 D... 42 0.058
gb|BQ756210.1|BQ756210 EBem06_SQ001_B07_R embryo, 21 DPA, n... 42 0.058
gb|BQ768475.1|BQ768475 EBro08_SQ011_G19_R root, 3 week, dro... 42 0.058
gb|BU977917.1|BU977917 HA12E09r HA Hordeum vulgare subsp. v... 42 0.058
gb|BU997001.1|BU997001 HI06J07r HI Hordeum vulgare subsp. v... 42 0.058
gb|BJ545538.1|BJ545538 BJ545538 K. Sato unpublished cDNA li... 42 0.058
gb|CV055924.1|CV055924 BNEL12A11 Barley EST endosperm libra... 42 0.058
gb|CV063949.1|CV063949 BNEL95b11 Barley EST endosperm libra... 42 0.058
gb|AL500489.1|AL500489 AL500489 Hordeum vulgare Barke etiol... 40 0.23
gb|AL503929.1|AL503929 AL503929 Hordeum vulgare Barke roots... 40 0.23
gb|AL506872.1|AL506872 AL506872 Hordeum vulgare Barke devel... 40 0.23
gb|AL507217.1|AL507217 AL507217 Hordeum vulgare Barke devel... 40 0.23
gb|AL507368.1|AL507368 AL507368 Hordeum vulgare Barke devel... 40 0.23
gb|AL507704.1|AL507704 AL507704 Hordeum vulgare Barke devel... 40 0.23
gb|AL508127.1|AL508127 AL508127 Hordeum vulgare Barke devel... 40 0.23
gb|AL508630.1|AL508630 AL508630 Hordeum vulgare Barke devel... 40 0.23
gb|BF622994.1|BF622994 HVSMEa0012I07f Hordeum vulgare seedl... 40 0.23
gb|BG299306.1|BG299306 HVSMEa0019F01f Hordeum vulgare seedl... 40 0.23
gb|BF630849.2|BF630849 HVSMEb0014D17f Hordeum vulgare seedl... 40 0.23
gb|BF256346.2|BF256346 HVSMEf0009F04f Hordeum vulgare seedl... 40 0.23
gb|BI951899.1|BI951899 HVSMEm0003K08f Hordeum vulgare green... 40 0.23
gb|BI953573.1|BI953573 HVSMEm0013G03f Hordeum vulgare green... 40 0.23
gb|BI955335.1|BI955335 HVSMEm0022J16f Hordeum vulgare green... 40 0.23
gb|BI955729.1|BI955729 HVSMEm0024E04f Hordeum vulgare green... 40 0.23
gb|BI955740.1|BI955740 HVSMEm0024E20f Hordeum vulgare green... 40 0.23
gb|BF261490.2|BF261490 HV_CEa0001G19f Hordeum vulgare seedl... 40 0.23
gb|BF065362.2|BF065362 HV_CEb0012D17f Hordeum vulgare seedl... 40 0.23
gb|BI958051.1|BI958051 HVSMEn0013B20f Hordeum vulgare rachi... 40 0.23
gb|BF254616.3|BF254616 HVSMEf0004I10f Hordeum vulgare seedl... 40 0.23
gb|BF259935.3|BF259935 HVSMEf0020K16f Hordeum vulgare seedl... 40 0.23
gb|BE195901.3|BE195901 HVSMEh0090N09f Hordeum vulgare 5-45 ... 40 0.23
gb|BE214059.2|BE214059 HV_CEb0002B09f Hordeum vulgare seedl... 40 0.23
gb|BQ460148.1|BQ460148 HA07B12r HA Hordeum vulgare subsp. v... 40 0.23
gb|BQ461129.1|BQ461129 HE01B23r HE Hordeum vulgare subsp. v... 40 0.23
gb|BQ464396.1|BQ464396 HF02C14r HF Hordeum vulgare subsp. v... 40 0.23
gb|BQ464412.1|BQ464412 HF02D08r HF Hordeum vulgare subsp. v... 40 0.23
gb|BQ467691.1|BQ467691 HS04J05r HS Hordeum vulgare subsp. v... 40 0.23
gb|BQ468263.1|BQ468263 HP01K07T HP Hordeum vulgare subsp. v... 40 0.23
gb|BQ468806.1|BQ468806 HM02G10r HM Hordeum vulgare subsp. v... 40 0.23
gb|BQ469009.1|BQ469009 HM03B14r HM Hordeum vulgare subsp. v... 40 0.23
gb|BQ469579.1|BQ469579 HZ01D15r HZ Hordeum vulgare subsp. v... 40 0.23
gb|BM377158.2|BM377158 EBem05_SQ004_E18_R embryo, 14 DPA, n... 40 0.23
gb|BM368992.2|BM368992 EBem07_SQ002_D17_R embryo, 28 DPA, n... 40 0.23
gb|BM370600.2|BM370600 EBro08_SQ004_L09_R root, 3 week, dro... 40 0.23
gb|BQ757020.1|BQ757020 EBem10_SQ002_I13_R embryo, 2 Day ger... 40 0.23
gb|BQ768733.1|BQ768733 EBro08_SQ012_D17_R root, 3 week, dro... 40 0.23
gb|BU976563.1|BU976563 HA03O16r HA Hordeum vulgare subsp. v... 40 0.23
gb|BU978209.1|BU978209 HA12M04r HA Hordeum vulgare subsp. v... 40 0.23
gb|BU978517.1|BU978517 HA13H11r HA Hordeum vulgare subsp. v... 40 0.23
gb|BU978527.1|BU978527 HA13H23r HA Hordeum vulgare subsp. v... 40 0.23
gb|BU978729.1|BU978729 HA14B19r HA Hordeum vulgare subsp. v... 40 0.23
gb|BU981723.1|BU981723 HA24H04r HA Hordeum vulgare subsp. v... 40 0.23
gb|BU982919.1|BU982919 HA27P20r HA Hordeum vulgare subsp. v... 40 0.23
gb|BU983414.1|BU983414 HA29K13r HA Hordeum vulgare subsp. v... 40 0.23
gb|BU983461.1|BU983461 HA29N06r HA Hordeum vulgare subsp. v... 40 0.23
gb|BU983705.1|BU983705 HA30L10r HA Hordeum vulgare subsp. v... 40 0.23
gb|BU994106.1|BU994106 HM05M03r HM Hordeum vulgare subsp. v... 40 0.23
gb|BU995425.1|BU995425 HM10D13r HM Hordeum vulgare subsp. v... 40 0.23
gb|BU999740.1|BU999740 HI15J03r HI Hordeum vulgare subsp. v... 40 0.23
gb|CA002238.1|CA002238 HS06O15r HS Hordeum vulgare subsp. v... 40 0.23
gb|CA003040.1|CA003040 HS09D04r HS Hordeum vulgare subsp. v... 40 0.23
gb|CA007420.1|CA007420 HU07O14r HU Hordeum vulgare subsp. v... 40 0.23
gb|CA018337.1|CA018337 HV08F10r HV Hordeum vulgare subsp. v... 40 0.23
gb|CA023327.1|CA023327 HZ45O06r HZ Hordeum vulgare subsp. v... 40 0.23
gb|CA025213.1|CA025213 HZ51I11r HZ Hordeum vulgare subsp. v... 40 0.23
gb|CA027364.1|CA027364 HZ58K23r HZ Hordeum vulgare subsp. v... 40 0.23
gb|CA028332.1|CA028332 HZ61K16r HZ Hordeum vulgare subsp. v... 40 0.23
gb|CA030777.1|CA030777 HX08B16r HX Hordeum vulgare subsp. v... 40 0.23
gb|CA031768.1|CA031768 HX11B08r HX Hordeum vulgare subsp. v... 40 0.23
gb|CB876748.1|CB876748 HP02E12T HP Hordeum vulgare subsp. v... 40 0.23
gb|CB877472.1|CB877472 HP05A21T HP Hordeum vulgare subsp. v... 40 0.23
gb|CB879324.1|CB879324 HP11M01T HP Hordeum vulgare subsp. v... 40 0.23
gb|CB882751.1|CB882751 HL02L24w HL Hordeum vulgare subsp. v... 40 0.23
gb|CK124459.1|CK124459 BES1824109d13 BES1824 Hordeum vulgar... 40 0.23
gb|CK125767.1|CK125767 BES1824110l22 BES1824 Hordeum vulgar... 40 0.23
gb|AF294753.1| Hordeum vulgare subsp. vulgare glutamyl-tRNA... 40 0.23
gb|AY661558.1| Hordeum vulgare subsp. vulgare eIF4E gene lo... 40 0.23
>gb|BE558428.1|BE558428 HV_CEb0017J24f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0017J24f, mRNA sequence
Length = 830
Score = 654 bits (330), Expect = 0.0
Identities = 537/605 (88%), Gaps = 1/605 (0%)
Strand = Plus / Minus
Query: 906 acgagctgatcaccgtcacgtggtggcccatggccttggctaccttcacgcccatgtggc 965
||||||||||||||||||||||||| ||||||| ||| | || ||||||||||||||||
Sbjct: 696 acgagctgatcaccgtcacgtggtgccccatggatttgcccac-ttcacgcccatgtggc 638
Query: 966 ccacgccgccgaggcccaggatgccgccacggaggcccggggtcgtcagcccaaagtgct 1025
|||||||||| |||||||| | ||||| || ||||| |||||| |||||| |||||||
Sbjct: 637 ccacgccgccaaggcccagattcccgccgcgnaggccgggggtcatcagccagaagtgct 578
Query: 1026 tcagcgggctgtacaccgtcacgccagcgcacagcagcggcgccgcttgctccggagcca 1085
||||||||||||||||||||||||| |||||||||||||||||||| |||||||| || |
Sbjct: 577 tcagcgggctgtacaccgtcacgcccgcgcacagcagcggcgccgcctgctccggcgcaa 518
Query: 1086 gacccgccgggatcttcaccacaaacttctggtcgacgaccatggtggaggcgaatccac 1145
| || || |||||||||||||| |||||||| ||||||||||||| ||||||||| || |
Sbjct: 517 gcccggcggggatcttcaccacgaacttctgatcgacgaccatggcggaggcgaagccgc 458
Query: 1146 cctgcgtgggccgtccatcagtgtagacgtcgttgtatgaccagatcttcttgttgcagt 1205
| ||||| |||| || || ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 457 cttgcgtcggcctgccgtcggtgtagacgtcgttgtacgaccagatcttcttgttgcagt 398
Query: 1206 actgctcaacgttggccttgcaggggctgcactcgcggcagcacccaacgatcaccccga 1265
||||||| ||||| |||||||| || | ||| |||||||||||||| ||||||||||| |
Sbjct: 397 actgctcgacgttcgccttgcacggccggcagtcgcggcagcaccccacgatcaccccca 338
Query: 1266 cgcctaccacgtcgccgacgccgtacttggccacctcgggcccgacctccaccacctcgc 1325
|||| |||||||||||||||| ||||||| |||||| ||||||||||||||||||||||
Sbjct: 337 cgccgaccacgtcgccgacgcggtacttgctcacctccggcccgacctccaccacctcgc 278
Query: 1326 cgaccacctcgtgcccagggaccataggatactttgaagccccgaggtggttcttggcct 1385
| |||||||| ||||| |||||||| |||||||| ||||| || |||| ||||||| |||
Sbjct: 277 caaccacctcatgccctgggaccatgggatacttggaagcacccaggtcgttcttgacct 218
Query: 1386 ggtggatgtccgtgtggcagatcccgcagtagagcaccttcaccaccacatcttcagggc 1445
||||||||||||||||||| || |||||||| ||||||| |||||||||||||||||
Sbjct: 217 ggtggatgtccgtgtggcaaatgccgcagtatttaaccttcaacaccacatcttcagggc 158
Query: 1446 ctgtgttcctgagggtgtaggagtagggggagaggtgtccggtggcgtccctggcggccc 1505
|||| |||||||||||||| | ||||||||||||||| ||||||||||||||||||||||
Sbjct: 157 ctgttttcctgagggtgtatgtgtagggggagaggtggccggtggcgtccctggcggccc 98
Query: 1506 acccg 1510
|||||
Sbjct: 97 acccg 93
>gb|BI957446.1|BI957446 HVSMEn0009J16f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0009J16f,
mRNA sequence
Length = 646
Score = 646 bits (326), Expect = 0.0
Identities = 553/629 (87%)
Strand = Plus / Minus
Query: 512 tagcggacgtcgttgcgctccagccgctccagcgcctcgttcacgtaccccatcttgacc 571
||||| |||||||||||||| ||| ||| ||||| | ||| ||||| ||||||||||
Sbjct: 645 tagcgcacgtcgttgcgctcgagcttctcgagcgcntggttgacgtagtccatcttgacg 586
Query: 572 acctcgatctgggaggtgagccccttgtcgacgcagaactgaagcacctcagcggtctcg 631
||||||||||| |||||||||||||||||||||||||||| || ||||| | ||||||
Sbjct: 585 acctcgatctgcgaggtgagccccttgtcgacgcagaacttgaggacctcctccgtctcg 526
Query: 632 tcgatgctgccgatgaagctccccgtgatggccttccgccccagcatcaccatgggcgac 691
|| ||||| |||||||||||||||||||||| ||||| ||||||||||||||| || |||
Sbjct: 525 tccatgctcccgatgaagctccccgtgatggtcttcctccccagcatcaccattggggac 466
Query: 692 acgaagctcaggggctcgccgatgacgcccagcagcacgagcttgccgtccagcttcagc 751
|||||||| || ||||| |||| ||||||| |||||||||||||||||||| ||| |||
Sbjct: 465 acgaagctgagcggctccgcgatcacgcccatcagcacgagcttgccgtccatcttgagc 406
Query: 752 agcgccaggtacggctccagcgggtggtgcacgggcaccgtgtcgatgatgtagtccagc 811
||||||||||| |||||||||||||| | ||||||||| |||||||||||||||||||||
Sbjct: 405 agcgccaggtagggctccagcgggtgcttcacgggcacggtgtcgatgatgtagtccagc 346
Query: 812 gagtcggcggccgcccccatggccgcggcgtccgagctcactaggtacgcgtccgcgccg 871
||||||||||| || |||| ||||||| ||||| || |||||| |||| |||||
Sbjct: 345 gagtcggcggcggcggccatctggtcggcgtcggagctgacgaggtactcgtcggcgccc 286
Query: 872 aggtggtccattgcctccgcgcgcttcttggacgacgagctgatcaccgtcacgtggtgg 931
|||| ||||| ||||| || ||||||||| |||||||||||||||||||||||||||
Sbjct: 285 aggtcgtccacggcctcggcccgcttcttgttggacgagctgatcaccgtcacgtggtgg 226
Query: 932 cccatggccttggctaccttcacgcccatgtggcccacgccgccgaggcccaggatgccg 991
||||||| |||||| ||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 225 cccatggacttggccaccttcacgcccatgtggcccacgccgcccaggcccaggatcccg 166
Query: 992 ccacggaggcccggggtcgtcagcccaaagtgcttcagcgggctgtacaccgtcacgcca 1051
|| |||||||| |||||| ||||||| ||||||||||||||||||||||||||||||||
Sbjct: 165 ccgcggaggccgggggtcatcagcccgaagtgcttcagcgggctgtacaccgtcacgccc 106
Query: 1052 gcgcacagcagcggcgccgcttgctccggagccagacccgccgggatcttcaccacaaac 1111
|||||||||||||||||||| |||||||| || || || || |||||||||||||| |||
Sbjct: 105 gcgcacagcagcggcgccgcctgctccggcgcaagcccggcggggatcttcaccacgaac 46
Query: 1112 ttctggtcgacgaccatggtggaggcgaa 1140
||||| ||||||||||||| |||||||||
Sbjct: 45 ttctgatcgacgaccatggcggaggcgaa 17
>gb|BU995195.1|BU995195 HM09I05r HM Hordeum vulgare subsp. vulgare cDNA clone HM09I05
5-PRIME, mRNA sequence
Length = 622
Score = 642 bits (324), Expect = 0.0
Identities = 495/552 (89%)
Strand = Plus / Minus
Query: 959 atgtggcccacgccgccgaggcccaggatgccgccacggaggcccggggtcgtcagccca 1018
||||||||||||||||| ||||||||||| ||||| |||||||| |||||| |||||||
Sbjct: 622 atgtggcccacgccgcccaggcccaggatcccgccgcggaggccgggggtcatcagcccg 563
Query: 1019 aagtgcttcagcgggctgtacaccgtcacgccagcgcacagcagcggcgccgcttgctcc 1078
|||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 562 aagtgcttcagcgggctgtacaccgtcacgcccgcgcacagcagcggcgccgcctgctcc 503
Query: 1079 ggagccagacccgccgggatcttcaccacaaacttctggtcgacgaccatggtggaggcg 1138
|| || || || || |||||||||||||| |||||||| ||||||||||||| |||||||
Sbjct: 502 ggcgcaagcccggcggggatcttcaccacgaacttctgatcgacgaccatggcggaggcg 443
Query: 1139 aatccaccctgcgtgggccgtccatcagtgtagacgtcgttgtatgaccagatcttcttg 1198
|| || |||||||| |||| || || ||||||||||||||||| |||||||||||||||
Sbjct: 442 aagccgccctgcgtcggcctgccgtcggtgtagacgtcgttgtacgaccagatcttcttg 383
Query: 1199 ttgcagtactgctcaacgttggccttgcaggggctgcactcgcggcagcacccaacgatc 1258
|||||||||||||| ||||| |||||||| || | ||| |||||||||||||| ||||||
Sbjct: 382 ttgcagtactgctcgacgttcgccttgcacggccggcagtcgcggcagcaccccacgatc 323
Query: 1259 accccgacgcctaccacgtcgccgacgccgtacttggccacctcgggcccgacctccacc 1318
||||| ||||| |||||||||||||||| ||||||| |||||| |||||||||||||||
Sbjct: 322 acccccacgccgaccacgtcgccgacgcggtacttgctcacctccggcccgacctccacc 263
Query: 1319 acctcgccgaccacctcgtgcccagggaccataggatactttgaagccccgaggtggttc 1378
|||||||| |||||||| ||||| |||||||| |||||||| ||||| || |||| ||||
Sbjct: 262 acctcgccaaccacctcatgccctgggaccatgggatacttggaagcacccaggtcgttc 203
Query: 1379 ttggcctggtggatgtccgtgtggcagatcccgcagtagagcaccttcaccaccacatct 1438
||| |||||||||||||||||||||| || |||||||| ||||||| ||||||||||
Sbjct: 202 ttgacctggtggatgtccgtgtggcaaatgccgcagtatttaaccttcaacaccacatct 143
Query: 1439 tcagggcctgtgttcctgagggtgtaggagtagggggagaggtgtccggtggcgtccctg 1498
||||||||||| |||||||||||||| | ||||||||||||||| |||||||||||||||
Sbjct: 142 tcagggcctgttttcctgagggtgtatgtgtagggggagaggtggccggtggcgtccctg 83
Query: 1499 gcggcccacccg 1510
||||||||||||
Sbjct: 82 gcggcccacccg 71
>gb|BE214468.1|BE214468 HV_CEb0003I17f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0003I17f, mRNA sequence
Length = 723
Score = 626 bits (316), Expect = e-178
Identities = 535/604 (88%), Gaps = 3/604 (0%)
Strand = Plus / Minus
Query: 909 agctgatcaccgtcacgtggt-ggcccatggccttggctaccttcacgcccatgtggccc 967
|||||||| |||||| ||||| ||||||||| ||||| || |||| |||||||||||||
Sbjct: 699 agctgatccccgtca-gtggttggcccatggaattggccactttcaggcccatgtggccc 641
Query: 968 acgccgccgaggcccaggatgccgccacggaggcccggggtcgtcagcccaaagtgcttc 1027
|||||||| ||||||||||| ||||| |||||||| |||||| ||||||| |||||||||
Sbjct: 640 acgccgcccaggcccaggatcccgccgcggaggccgggggtcttcagcccgaagtgcttc 581
Query: 1028 agcgggctgtacaccgtcacg-ccagcgcacagcagcggcgccgcttgctccggagccag 1086
||||||||||||||||||||| || ||||||||||| ||||||||||||||||| || ||
Sbjct: 580 agcgggctgtacaccgtcacggcccgcgcacagcaggggcgccgcttgctccggcgcaag 521
Query: 1087 acccgccgggatcttcaccacaaacttctggtcgacgaccatggtggaggcgaatccacc 1146
|| || |||||||||||| | |||||||| |||||| |||||| ||||||||| || ||
Sbjct: 520 cccggcggggatcttcaccccgaacttctgatcgacggccatggcggaggcgaagccgcc 461
Query: 1147 ctgcgtgggccgtccatcagtgtagacgtcgttgtatgaccagatcttcttgttgcagta 1206
||||| |||| || || ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 460 ttgcgtcggcctgccgtcggtgtagacgtcgttgtacgaccagatcttcttgttgcagta 401
Query: 1207 ctgctcaacgttggccttgcaggggctgcactcgcggcagcacccaacgatcaccccgac 1266
|||||| ||||| |||||||| || | ||| |||||||||||||| ||||||||||| ||
Sbjct: 400 ctgctcgacgttcgccttgcacggccggcagtcgcggcagcaccccacgatcacccccac 341
Query: 1267 gcctaccacgtcgccgacgccgtacttggccacctcgggcccgacctccaccacctcgcc 1326
||| |||||||||||||||| ||||||| |||||| |||||||||||||||||||||||
Sbjct: 340 gccgaccacgtcgccgacgcggtacttgctcacctccggcccgacctccaccacctcgcc 281
Query: 1327 gaccacctcgtgcccagggaccataggatactttgaagccccgaggtggttcttggcctg 1386
|||||||| ||||| |||||||| |||||||| ||||| || |||| ||||||| ||||
Sbjct: 280 aaccacctcatgccctgggaccatgggatacttggaagcacccaggtcgttcttgacctg 221
Query: 1387 gtggatgtccgtgtggcagatcccgcagtagagcaccttcaccaccacatcttcagggcc 1446
|||||||||||||||||| || |||||||| ||||||| ||||||||||||||||||
Sbjct: 220 gtggatgtccgtgtggcaaatgccgcagtatttaaccttcaacaccacatcttcagggcc 161
Query: 1447 tgtgttcctgagggtgtaggagtagggggagaggtgtccggtggcgtccctggcggccca 1506
||| |||||||||||||| | ||||||||||||||| |||||||||||||||||||||||
Sbjct: 160 tgttttcctgagggtgtatgtgtagggggagaggtggccggtggcgtccctggcggccca 101
Query: 1507 cccg 1510
||||
Sbjct: 100 cccg 97
>gb|BE194442.1|BE194442 HVSMEh0085I24f Hordeum vulgare 5-45 DAP spike EST library HVcDNA0009
(5 to 45 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEh0085I24f, mRNA sequence
Length = 860
Score = 607 bits (306), Expect = e-172
Identities = 528/602 (87%)
Strand = Plus / Minus
Query: 626 gtctcgtcgatgctgccgatgaagctccccgtgatggccttccgccccagcatcaccatg 685
|||||||| | ||| |||| |||||||||||||||| ||||| |||||||||| ||||
Sbjct: 617 gtctcgtccaggctcccgagaaagctccccgtgatggtcttcctccccagcatccccatt 558
Query: 686 ggcgacacgaagctcaggggctcgccgatgacgcccagcagcacgagcttgccgtccagc 745
|| ||||||||| | || ||||| |||| ||||||| |||||||||||||||||||| |
Sbjct: 557 ggggacacgaagttgagcggctccgcgatcacgcccatcagcacgagcttgccgtccatc 498
Query: 746 ttcagcagcgccaggtacggctccagcgggtggtgcacgggcaccgtgtcgatgatgtag 805
|| |||||||||||||| |||||||||||||| | ||||||||| |||||||||||||||
Sbjct: 497 ttgagcagcgccaggtagggctccagcgggtgcttcacgggcacggtgtcgatgatgtag 438
Query: 806 tccagcgagtcggcggccgcccccatggccgcggcgtccgagctcactaggtacgcgtcc 865
||||||||||||||||| || |||| ||||||| ||||| || |||||| ||||
Sbjct: 437 tccagcgagtcggcggcggcggccatctggtcggcgtcggagctgacgaggtactcgtcg 378
Query: 866 gcgccgaggtggtccattgcctccgcgcgcttcttggacgacgagctgatcaccgtcacg 925
||||| |||| ||||| ||||| || ||||||||| |||||||||||||||||||||
Sbjct: 377 gcgcccaggtcgtccacggcctcggcccgcttcttgttggacgagctgatcaccgtcacg 318
Query: 926 tggtggcccatggccttggctaccttcacgcccatgtggcccacgccgccgaggcccagg 985
||||||||||||| |||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 317 tggtggcccatggacttggccaccttcacgcccatgtggcccacgccgcccaggcccagg 258
Query: 986 atgccgccacggaggcccggggtcgtcagcccaaagtgcttcagcgggctgtacaccgtc 1045
|| ||||| |||||||| |||||| ||||||| |||||||||||||||||||||||||||
Sbjct: 257 atcccgccgcggaggccgggggtcatcagcccgaagtgcttcagcgggctgtacaccgtc 198
Query: 1046 acgccagcgcacagcagcggcgccgcttgctccggagccagacccgccgggatcttcacc 1105
||||| |||||||||||||||||||| |||||||| || || || || ||||||||||||
Sbjct: 197 acgcccgcgcacagcagcggcgccgcctgctccggcgcaagcccggcggggatcttcacc 138
Query: 1106 acaaacttctggtcgacgaccatggtggaggcgaatccaccctgcgtgggccgtccatca 1165
|| |||||||| ||||||||||||| ||||||||| || |||||||| |||| || ||
Sbjct: 137 acgaacttctgatcgacgaccatggcggaggcgaagccgccctgcgtcggcctgccgtcg 78
Query: 1166 gtgtagacgtcgttgtatgaccagatcttcttgttgcagtactgctcaacgttggccttg 1225
||||||||||||||||| ||||||||||| ||||||||||||||||| ||||| ||||||
Sbjct: 77 gtgtagacgtcgttgtacgaccagatcttattgttgcagtactgctcgacgttcgccttg 18
Query: 1226 ca 1227
||
Sbjct: 17 ca 16
>gb|AL507638.1|AL507638 AL507638 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY06G20V 5',
mRNA sequence
Length = 699
Score = 579 bits (292), Expect = e-163
Identities = 498/560 (88%), Gaps = 5/560 (0%)
Strand = Plus / Minus
Query: 956 cccatgtggccc-acgccgccgaggccc-aggatgccg-ccacggaggcccggggtcgtc 1012
|||||||||||| |||||||| |||||| ||||| ||| || |||||||| |||||| ||
Sbjct: 661 cccatgtggccccacgccgcccaggccccaggatcccggccgcggaggccgggggtcatc 602
Query: 1013 agcccaaagtgcttca-gcgggctgtacaccgtcacgccagcgcaca-gcagcggcgccg 1070
||||| |||||||||| |||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 601 agcccgaagtgcttcaagcgggctgtacaccgtcacgcccgcgcacaagcagcggcgccg 542
Query: 1071 cttgctccggagccagacccgccgggatcttcaccacaaacttctggtcgacgaccatgg 1130
| |||||||| || || || || |||||||||||||| |||||||| |||||||||||||
Sbjct: 541 cctgctccggcgcaagcccggcggggatcttcaccacgaacttctgatcgacgaccatgg 482
Query: 1131 tggaggcgaatccaccctgcgtgggccgtccatcagtgtagacgtcgttgtatgaccaga 1190
||||||||| || |||||||| |||| || || ||||||||||||||||| |||||||
Sbjct: 481 cggaggcgaagccgccctgcgtcggcctgccgtcggtgtagacgtcgttgtacgaccaga 422
Query: 1191 tcttcttgttgcagtactgctcaacgttggccttgcaggggctgcactcgcggcagcacc 1250
|||||||||||||||||||||| ||||| |||||||| || | ||| |||||||||||||
Sbjct: 421 tcttcttgttgcagtactgctcgacgttcgccttgcacggccggcagtcgcggcagcacc 362
Query: 1251 caacgatcaccccgacgcctaccacgtcgccgacgccgtacttggccacctcgggcccga 1310
| ||||||||||| ||||| |||||||||||||||| ||||||| |||||| |||||||
Sbjct: 361 ccacgatcacccccacgccgaccacgtcgccgacgcggtacttgctcacctccggcccga 302
Query: 1311 cctccaccacctcgccgaccacctcgtgcccagggaccataggatactttgaagccccga 1370
|||||||||||||||| |||||||| ||||| |||||||| |||||||| ||||| || |
Sbjct: 301 cctccaccacctcgccaaccacctcatgccctgggaccatgggatacttggaagcaccca 242
Query: 1371 ggtggttcttggcctggtggatgtccgtgtggcagatcccgcagtagagcaccttcacca 1430
||| ||||||| |||||||||||||||||||||| || |||||||| ||||||| ||
Sbjct: 241 ggtcgttcttgacctggtggatgtccgtgtggcaaatgccgcagtatttaaccttcaaca 182
Query: 1431 ccacatcttcagggcctgtgttcctgagggtgtaggagtagggggagaggtgtccggtgg 1490
||||||||||||||||||| |||||||||||||| | ||||||||||||||| |||||||
Sbjct: 181 ccacatcttcagggcctgttttcctgagggtgtatgtgtagggggagaggtggccggtgg 122
Query: 1491 cgtccctggcggcccacccg 1510
||||||||||||||||||||
Sbjct: 121 cgtccctggcggcccacccg 102
>gb|BE216591.1|BE216591 HV_CEb0010O10f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0010O10f, mRNA sequence
Length = 740
Score = 573 bits (289), Expect = e-162
Identities = 479/541 (88%), Gaps = 1/541 (0%)
Strand = Plus / Minus
Query: 971 ccgccgaggcccagga-tgccgccacggaggcccggggtcgtcagcccaaagtgcttcag 1029
||||| |||||||||| | || || || |||||||||||| |||||| ||||||||||
Sbjct: 647 ccgcccaggcccaggattccccccccgaaggcccggggtcatcagcctcaagtgcttcaa 588
Query: 1030 cgggctgtacaccgtcacgccagcgcacagcagcggcgccgcttgctccggagccagacc 1089
||||||||||||||||||||| |||||||||||||||||||| |||||||| || || ||
Sbjct: 587 cgggctgtacaccgtcacgcccgcgcacagcagcggcgccgcctgctccggcgcaagccc 528
Query: 1090 cgccgggatcttcaccacaaacttctggtcgacgaccatggtggaggcgaatccaccctg 1149
|| ||||||||| |||| |||||||| ||||||||||||| ||||||||| || |||||
Sbjct: 527 ggcggggatcttctccacgaacttctgatcgacgaccatggcggaggcgaagccgccctg 468
Query: 1150 cgtgggccgtccatcagtgtagacgtcgttgtatgaccagatcttcttgttgcagtactg 1209
||| |||| || || ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 467 cgtcggcctgccgtcggtgtagacgtcgttgtacgaccagatcttcttgttgcagtactg 408
Query: 1210 ctcaacgttggccttgcaggggctgcactcgcggcagcacccaacgatcaccccgacgcc 1269
||| ||||| |||||||| || | ||| |||||||||||||| ||||||||||| |||||
Sbjct: 407 ctcgacgttcgccttgcacggccggcagtcgcggcagcaccccacgatcacccccacgcc 348
Query: 1270 taccacgtcgccgacgccgtacttggccacctcgggcccgacctccaccacctcgccgac 1329
|||||||||||||||| ||||||| |||||| ||||||||||||||||||||||| ||
Sbjct: 347 gaccacgtcgccgacgcggtacttgctcacctccggcccgacctccaccacctcgccaac 288
Query: 1330 cacctcgtgcccagggaccataggatactttgaagccccgaggtggttcttggcctggtg 1389
|||||| ||||| |||||||| |||||||| ||||| || |||| ||||||| |||||||
Sbjct: 287 cacctcatgccctgggaccatgggatacttggaagcacccaggtcgttcttgacctggtg 228
Query: 1390 gatgtccgtgtggcagatcccgcagtagagcaccttcaccaccacatcttcagggcctgt 1449
||||||||||||||| || |||||||| ||||||| |||||||||||||||||||||
Sbjct: 227 gatgtccgtgtggcaaatgccgcagtatttaaccttcaacaccacatcttcagggcctgt 168
Query: 1450 gttcctgagggtgtaggagtagggggagaggtgtccggtggcgtccctggcggcccaccc 1509
|||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 167 tttcctgagggtgtatgtgtagggggagaggtggccggtggcgtccctggcggcccaccc 108
Query: 1510 g 1510
|
Sbjct: 107 g 107
>gb|BQ763191.1|BQ763191 EBro02_SQ007_C15_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ007_C15 5', mRNA sequence
Length = 578
Score = 549 bits (277), Expect = e-154
Identities = 433/485 (89%)
Strand = Plus / Minus
Query: 1026 tcagcgggctgtacaccgtcacgccagcgcacagcagcggcgccgcttgctccggagcca 1085
||||||||||||||||||||||||| |||||||||||||||||||| |||||||| || |
Sbjct: 578 tcagcgggctgtacaccgtcacgcccgcgcacagcagcggcgccgcctgctccggcgcaa 519
Query: 1086 gacccgccgggatcttcaccacaaacttctggtcgacgaccatggtggaggcgaatccac 1145
| || || |||||||||||||| |||||||| ||||||||||||| ||||||||| || |
Sbjct: 518 gcccggcggggatcttcaccacgaacttctgatcgacgaccatggcggaggcgaagccgc 459
Query: 1146 cctgcgtgggccgtccatcagtgtagacgtcgttgtatgaccagatcttcttgttgcagt 1205
||||||| |||| || || ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 458 cctgcgtcggcctgccgtcggtgtagacgtcgttgtacgaccagatcttcttgttgcagt 399
Query: 1206 actgctcaacgttggccttgcaggggctgcactcgcggcagcacccaacgatcaccccga 1265
||||||| ||||| |||||||| || | ||| |||||||||||||| ||||||||||| |
Sbjct: 398 actgctcgacgttcgccttgcacggccggcagtcgcggcagcaccccacgatcaccccca 339
Query: 1266 cgcctaccacgtcgccgacgccgtacttggccacctcgggcccgacctccaccacctcgc 1325
|||| |||||||||| ||||| ||||||| |||||| ||||||||||||||||||||||
Sbjct: 338 cgccgaccacgtcgctgacgcggtacttgctcacctccggcccgacctccaccacctcgc 279
Query: 1326 cgaccacctcgtgcccagggaccataggatactttgaagccccgaggtggttcttggcct 1385
| |||||||| ||||| |||||||| |||||||| ||||| || |||| ||||||| |||
Sbjct: 278 caaccacctcatgccctgggaccatgggatacttggaagcacccaggtcgttcttgacct 219
Query: 1386 ggtggatgtccgtgtggcagatcccgcagtagagcaccttcaccaccacatcttcagggc 1445
||||||||||||||||||| || |||||||| ||||||| |||||||||||||||||
Sbjct: 218 ggtggatgtccgtgtggcaaatgccgcagtatttaaccttcaacaccacatcttcagggc 159
Query: 1446 ctgtgttcctgagggtgtaggagtagggggagaggtgtccggtggcgtccctggcggccc 1505
|||| |||||||||||||| | ||||||||||||||| ||||||||||||||||||||||
Sbjct: 158 ctgttttcctgagggtgtatgtgtagggggagaggtggccggtggcgtccctggcggccc 99
Query: 1506 acccg 1510
|||||
Sbjct: 98 acccg 94
>gb|CK123411.1|CK123411 BES1824103p14 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010P143 5-PRIME, mRNA sequence
Length = 620
Score = 515 bits (260), Expect = e-144
Identities = 453/512 (88%), Gaps = 5/512 (0%)
Strand = Plus / Minus
Query: 1004 ggggtcgtcagcccaaagtgcttcagcggg-ctgtaca-ccgtcacgccagcgcacagca 1061
|||||| |||| || ||||||||||| ||| ||||||| |||||||||| ||||||||||
Sbjct: 603 ggggtcatcagnccgaagtgcttcagnggggctgtacaaccgtcacgcccgcgcacagca 544
Query: 1062 gcggcgccgcttgctccggagccagacccgccggg-atcttcaccac-aaacttctggtc 1119
|||||||||| || ||||| || || |||| |||| ||||||||||| ||||||||| ||
Sbjct: 543 gcggcgccgcctgntccggcgcaagncccggcggggatcttcaccacgaaacttctgatc 484
Query: 1120 gacgaccatggtggaggcgaat-ccaccctgcgtgggccgtccatcagtgtagacgtcgt 1178
||||||||||| ||||||||| || |||||||| |||| || || |||||||||||||
Sbjct: 483 gacgaccatggcggaggcgaaagccgccctgcgtcggcctgccgtcggtgtagacgtcgt 424
Query: 1179 tgtatgaccagatcttcttgttgcagtactgctcaacgttggccttgcaggggctgcact 1238
|||| ||||||||||||||||||||||||||||| ||||| |||||||| || | ||| |
Sbjct: 423 tgtacgaccagatcttcttgttgcagtactgctcgacgttcgccttgcacggccggcagt 364
Query: 1239 cgcggcagcacccaacgatcaccccgacgcctaccacgtcgccgacgccgtacttggcca 1298
||||||||||||| ||||||||||| ||||| |||||||||||||||| ||||||| ||
Sbjct: 363 cgcggcagcaccccacgatcacccccacgccgaccacgtcgccgacgcggtacttgctca 304
Query: 1299 cctcgggcccgacctccaccacctcgccgaccacctcgtgcccagggaccataggatact 1358
|||| ||||||||||||||||||||||| |||||||| ||||| |||||||| |||||||
Sbjct: 303 cctccggcccgacctccaccacctcgccaaccacctcatgccctgggaccatgggatact 244
Query: 1359 ttgaagccccgaggtggttcttggcctggtggatgtccgtgtggcagatcccgcagtaga 1418
| ||||| || |||| ||||||| |||||||||||||||||||||| || ||||||||
Sbjct: 243 tggaagcacccaggtcgttcttgacctggtggatgtccgtgtggcaaatgccgcagtatt 184
Query: 1419 gcaccttcaccaccacatcttcagggcctgtgttcctgagggtgtaggagtagggggaga 1478
||||||| ||||||||||||||||||||| |||||||||||||| | |||||||||||
Sbjct: 183 taaccttcaacaccacatcttcagggcctgttttcctgagggtgtatgtgtagggggaga 124
Query: 1479 ggtgtccggtggcgtccctggcggcccacccg 1510
|||| |||||||||||||||||||||||||||
Sbjct: 123 ggtggccggtggcgtccctggcggcccacccg 92
>gb|BQ469466.1|BQ469466 HM04O09r HM Hordeum vulgare subsp. vulgare cDNA clone HM04O09
5-PRIME, mRNA sequence
Length = 554
Score = 509 bits (257), Expect = e-143
Identities = 407/457 (89%)
Strand = Plus / Minus
Query: 1054 gcacagcagcggcgccgcttgctccggagccagacccgccgggatcttcaccacaaactt 1113
|||||||||||||||||| |||||||| || || || || |||||||||||||| |||||
Sbjct: 554 gcacagcagcggcgccgcctgctccggcgcaagcccggcggggatcttcaccacgaactt 495
Query: 1114 ctggtcgacgaccatggtggaggcgaatccaccctgcgtgggccgtccatcagtgtagac 1173
||| ||||||||||||| ||||||||| || |||||||| |||| || || ||||||||
Sbjct: 494 ctgatcgacgaccatggcggaggcgaagccgccctgcgtcggcctgccgtcggtgtagac 435
Query: 1174 gtcgttgtatgaccagatcttcttgttgcagtactgctcaacgttggccttgcaggggct 1233
||||||||| ||||||||||||||||||||||||||||| ||||| |||||||| || |
Sbjct: 434 gtcgttgtacgaccagatcttcttgttgcagtactgctcgacgttcgccttgcacggccg 375
Query: 1234 gcactcgcggcagcacccaacgatcaccccgacgcctaccacgtcgccgacgccgtactt 1293
||| |||||||||||||| ||||||||||| ||||| |||||||||||||||| ||||||
Sbjct: 374 gcagtcgcggcagcaccccacgatcacccccacgccgaccacgtcgccgacgcggtactt 315
Query: 1294 ggccacctcgggcccgacctccaccacctcgccgaccacctcgtgcccagggaccatagg 1353
| |||||| ||||||||||||||||||||||| |||||||| ||||| |||||||| ||
Sbjct: 314 gctcacctccggcccgacctccaccacctcgccaaccacctcatgccctgggaccatggg 255
Query: 1354 atactttgaagccccgaggtggttcttggcctggtggatgtccgtgtggcagatcccgca 1413
|||||| ||||| || |||| ||||||| |||||||||||||||||||||| || |||||
Sbjct: 254 atacttggaagcacccaggtcgttcttgacctggtggatgtccgtgtggcaaatgccgca 195
Query: 1414 gtagagcaccttcaccaccacatcttcagggcctgtgttcctgagggtgtaggagtaggg 1473
||| ||||||| ||||||||||||||||||||| |||||||||||||| | ||||||
Sbjct: 194 gtatttaaccttcaacaccacatcttcagggcctgttttcctgagggtgtatgtgtaggg 135
Query: 1474 ggagaggtgtccggtggcgtccctggcggcccacccg 1510
||||||||| |||||||||||||||||||||||||||
Sbjct: 134 ggagaggtggccggtggcgtccctggcggcccacccg 98
>gb|BF260353.3|BF260353 HVSMEf0021M09f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0021M09f, mRNA sequence
Length = 539
Score = 505 bits (255), Expect = e-141
Identities = 407/458 (88%)
Strand = Plus / Minus
Query: 1053 cgcacagcagcggcgccgcttgctccggagccagacccgccgggatcttcaccacaaact 1112
||||||||||||||||||| |||||||| || || || || |||||||||||||| ||||
Sbjct: 538 cgcacagcagcggcgccgcctgctccggcgcaagcccggcggggatcttcaccacgaact 479
Query: 1113 tctggtcgacgaccatggtggaggcgaatccaccctgcgtgggccgtccatcagtgtaga 1172
|||| ||||||||||||| ||||||||| || |||||||| |||| || || |||||||
Sbjct: 478 tctgatcgacgaccatggcggaggcgaagccgccctgcgtcggcctgccgtcggtgtaga 419
Query: 1173 cgtcgttgtatgaccagatcttcttgttgcagtactgctcaacgttggccttgcaggggc 1232
|||||||||| ||||||||||||||||||||||||||||| ||||| |||||||| || |
Sbjct: 418 cgtcgttgtacgaccagatcttcttgttgcagtactgctcgacgttcgccttgcacggcc 359
Query: 1233 tgcactcgcggcagcacccaacgatcaccccgacgcctaccacgtcgccgacgccgtact 1292
||| |||||||||||||| ||||||||||| ||||| |||||||||||||||| |||||
Sbjct: 358 ggcagtcgcggcagcaccccacgatcacccccacgccgaccacgtcgccgacgcggtact 299
Query: 1293 tggccacctcgggcccgacctccaccacctcgccgaccacctcgtgcccagggaccatag 1352
|| |||||| ||||||||||||||||||||||| |||||||| ||||| |||||||| |
Sbjct: 298 tgctcacctccggcccgacctccaccacctcgccaaccacctcatgccctgggaccatgg 239
Query: 1353 gatactttgaagccccgaggtggttcttggcctggtggatgtccgtgtggcagatcccgc 1412
||||||| ||||| | |||| ||||||| |||||||||||||||||||||| || ||||
Sbjct: 238 gatacttggaagcacncaggtcgttcttgacctggtggatgtccgtgtggcaaatgccgc 179
Query: 1413 agtagagcaccttcaccaccacatcttcagggcctgtgttcctgagggtgtaggagtagg 1472
|||| ||||||| ||||||||||||||||||||| |||||||||||||| | |||||
Sbjct: 178 agtatttaaccttcaacaccacatcttcagggcctgttttcctgagggtgtatgtgtagg 119
Query: 1473 gggagaggtgtccggtggcgtccctggcggcccacccg 1510
|||||||||| |||||||||||||||||||||||||||
Sbjct: 118 gggagaggtggccggtggcgtccctggcggcccacccg 81
>gb|BQ467847.1|BQ467847 HR01B24r HR Hordeum vulgare subsp. vulgare cDNA clone HR01B24
5-PRIME, mRNA sequence
Length = 558
Score = 502 bits (253), Expect = e-140
Identities = 403/453 (88%)
Strand = Plus / Minus
Query: 1058 agcagcggcgccgcttgctccggagccagacccgccgggatcttcaccacaaacttctgg 1117
|||||||||||||| |||||||| || || || || |||||||||||||| ||||||||
Sbjct: 558 agcagcggcgccgcctgctccggcgcaagcccggcggggatcttcaccacgaacttctga 499
Query: 1118 tcgacgaccatggtggaggcgaatccaccctgcgtgggccgtccatcagtgtagacgtcg 1177
||||||||||||| ||||||||| || |||||||| |||| || || ||||||||||||
Sbjct: 498 tcgacgaccatggcggaggcgaagccgccctgcgtcggcctgccgtcggtgtagacgtcg 439
Query: 1178 ttgtatgaccagatcttcttgttgcagtactgctcaacgttggccttgcaggggctgcac 1237
||||| ||||||||||||||||||||||||||||| ||||| |||||||| || | |||
Sbjct: 438 ttgtacgaccagatcttcttgttgcagtactgctcgacgttcgccttgcacggccggcag 379
Query: 1238 tcgcggcagcacccaacgatcaccccgacgcctaccacgtcgccgacgccgtacttggcc 1297
|||||||||||||| ||||||||||| ||||| |||||||||||||||| ||||||| |
Sbjct: 378 tcgcggcagcaccccacgatcacccccacgccgaccacgtcgccgacgcggtacttgctc 319
Query: 1298 acctcgggcccgacctccaccacctcgccgaccacctcgtgcccagggaccataggatac 1357
||||| ||||||||||||||||||||||| |||||||| ||||| |||||||| ||||||
Sbjct: 318 acctccggcccgacctccaccacctcgccaaccacctcatgccctgggaccatgggatac 259
Query: 1358 tttgaagccccgaggtggttcttggcctggtggatgtccgtgtggcagatcccgcagtag 1417
|| ||||| || |||| ||||||| |||||||||||||||||||||| || ||||||||
Sbjct: 258 ttggaagcacccaggtcgttcttgacctggtggatgtccgtgtggcaaatgccgcagtat 199
Query: 1418 agcaccttcaccaccacatcttcagggcctgtgttcctgagggtgtaggagtagggggag 1477
||||||| ||||||||||||||||||||| |||||||||||||| | ||||||||||
Sbjct: 198 ttaaccttcaacaccacatcttcagggcctgttttcctgagggtgtatgtgtagggggag 139
Query: 1478 aggtgtccggtggcgtccctggcggcccacccg 1510
||||| |||||||||||||||||||||||||||
Sbjct: 138 aggtggccggtggcgtccctggcggcccacccg 106
>gb|BQ660971.1|BQ660971 HM01F04w HM Hordeum vulgare subsp. vulgare cDNA clone HM01F04
3-PRIME, mRNA sequence
Length = 600
Score = 492 bits (248), Expect = e-137
Identities = 425/484 (87%)
Strand = Plus / Plus
Query: 481 gttgctaccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctccagccgctc 540
|||||| ||||||||||||||||||||||||||||| |||||||||||||| |||| |||
Sbjct: 117 gttgctcccggcgacgtcgacgacgaagcggtagcgcacgtcgttgcgctcgagcctctc 176
Query: 541 cagcgcctcgttcacgtaccccatcttgaccacctcgatctgggaggtgagccccttgtc 600
||||||| ||| ||||| |||||||||| ||||||||||| |||||||||||||||||
Sbjct: 177 gagcgcctggttgacgtagtccatcttgacgacctcgatctgcgaggtgagccccttgtc 236
Query: 601 gacgcagaactgaagcacctcagcggtctcgtcgatgctgccgatgaagctccccgtgat 660
||||||||||| || ||||| | |||||||| ||||| ||||||||||||||||||||
Sbjct: 237 gacgcagaacttgaggacctcctccgtctcgtccatgctcccgatgaagctccccgtgat 296
Query: 661 ggccttccgccccagcatcaccatgggcgacacgaagctcaggggctcgccgatgacgcc 720
|| ||||| ||||||||||||||| || ||||||||||| || ||||| |||| |||||
Sbjct: 297 ggtcttcctccccagcatcaccattggggacacgaagctgagcggctccgcgatcacgcc 356
Query: 721 cagcagcacgagcttgccgtccagcttcagcagcgccaggtacggctccagcgggtggtg 780
|| |||||||||||||||||||| ||| |||||||||||||| |||||||||||||| |
Sbjct: 357 catcagcacgagcttgccgtccatcttgagcagcgccaggtagggctccagcgggtgctt 416
Query: 781 cacgggcaccgtgtcgatgatgtagtccagcgagtcggcggccgcccccatggccgcggc 840
||||||||| |||||||||||||||||||||||||||||||| || |||| ||||
Sbjct: 417 cacgggcacggtgtcgatgatgtagtccagcgagtcggcggcggcggccatctggtcggc 476
Query: 841 gtccgagctcactaggtacgcgtccgcgccgaggtggtccattgcctccgcgcgcttctt 900
||| ||||| || |||||| |||| ||||| |||| ||||| ||||| || ||||||||
Sbjct: 477 gtcggagctgacgaggtactcgtcggcgcccaggtcgtccacggcctcggcccgcttctt 536
Query: 901 ggacgacgagctgatcaccgtcacgtggtggcccatggccttggctaccttcacgcccat 960
| |||||||||||||||||||||||||||||||||| |||||| ||||||||||||||
Sbjct: 537 gttggacgagctgatcaccgtcacgtggtggcccatggacttggccaccttcacgcccat 596
Query: 961 gtgg 964
||||
Sbjct: 597 gtgg 600
>gb|CB881341.1|CB881341 HM09I05w HM Hordeum vulgare subsp. vulgare cDNA clone HM09I05
3-PRIME, mRNA sequence
Length = 621
Score = 492 bits (248), Expect = e-137
Identities = 425/484 (87%)
Strand = Plus / Plus
Query: 481 gttgctaccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctccagccgctc 540
|||||| ||||||||||||||||||||||||||||| |||||||||||||| |||| |||
Sbjct: 138 gttgctcccggcgacgtcgacgacgaagcggtagcgcacgtcgttgcgctcgagcctctc 197
Query: 541 cagcgcctcgttcacgtaccccatcttgaccacctcgatctgggaggtgagccccttgtc 600
||||||| ||| ||||| |||||||||| ||||||||||| |||||||||||||||||
Sbjct: 198 gagcgcctggttgacgtagtccatcttgacgacctcgatctgcgaggtgagccccttgtc 257
Query: 601 gacgcagaactgaagcacctcagcggtctcgtcgatgctgccgatgaagctccccgtgat 660
||||||||||| || ||||| | |||||||| ||||| ||||||||||||||||||||
Sbjct: 258 gacgcagaacttgaggacctcctccgtctcgtccatgctcccgatgaagctccccgtgat 317
Query: 661 ggccttccgccccagcatcaccatgggcgacacgaagctcaggggctcgccgatgacgcc 720
|| ||||| ||||||||||||||| || ||||||||||| || ||||| |||| |||||
Sbjct: 318 ggtcttcctccccagcatcaccattggggacacgaagctgagcggctccgcgatcacgcc 377
Query: 721 cagcagcacgagcttgccgtccagcttcagcagcgccaggtacggctccagcgggtggtg 780
|| |||||||||||||||||||| ||| |||||||||||||| |||||||||||||| |
Sbjct: 378 catcagcacgagcttgccgtccatcttgagcagcgccaggtagggctccagcgggtgctt 437
Query: 781 cacgggcaccgtgtcgatgatgtagtccagcgagtcggcggccgcccccatggccgcggc 840
||||||||| |||||||||||||||||||||||||||||||| || |||| ||||
Sbjct: 438 cacgggcacggtgtcgatgatgtagtccagcgagtcggcggcggcggccatctggtcggc 497
Query: 841 gtccgagctcactaggtacgcgtccgcgccgaggtggtccattgcctccgcgcgcttctt 900
||| ||||| || |||||| |||| ||||| |||| ||||| ||||| || ||||||||
Sbjct: 498 gtcggagctgacgaggtactcgtcggcgcccaggtcgtccacggcctcggcccgcttctt 557
Query: 901 ggacgacgagctgatcaccgtcacgtggtggcccatggccttggctaccttcacgcccat 960
| |||||||||||||||||||||||||||||||||| |||||| ||||||||||||||
Sbjct: 558 gttggacgagctgatcaccgtcacgtggtggcccatggacttggccaccttcacgcccat 617
Query: 961 gtgg 964
||||
Sbjct: 618 gtgg 621
>gb|BM373958.2|BM373958 EBma03_SQ003_D14_R maternal, 8 DPA, no treatment, cv Optic, EBma03
Hordeum vulgare subsp. vulgare cDNA clone
EBma03_SQ003_D14 5', mRNA sequence
Length = 428
Score = 484 bits (244), Expect = e-135
Identities = 382/428 (89%)
Strand = Plus / Minus
Query: 951 tcacgcccatgtggcccacgccgccgaggcccaggatgccgccacggaggcccggggtcg 1010
||||||||||||||||||||||||| ||||||||||| ||||| |||||||| ||||||
Sbjct: 428 tcacgcccatgtggcccacgccgcccaggcccaggatcccgccgcggaggccgggggtca 369
Query: 1011 tcagcccaaagtgcttcagcgggctgtacaccgtcacgccagcgcacagcagcggcgccg 1070
||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 368 tcagcccgaagtgcttcagcgggctgtacaccgtcacgcccgcgcacagcagcggcgccg 309
Query: 1071 cttgctccggagccagacccgccgggatcttcaccacaaacttctggtcgacgaccatgg 1130
| |||||||| || || || || |||||||||||||| |||||||| |||||||||||||
Sbjct: 308 cctgctccggcgcaagcccggcggggatcttcaccacgaacttctgatcgacgaccatgg 249
Query: 1131 tggaggcgaatccaccctgcgtgggccgtccatcagtgtagacgtcgttgtatgaccaga 1190
||||||||| || |||||||| |||| || || ||||||||||||||| | |||||||
Sbjct: 248 cggaggcgaagccgccctgcgtcggcctgccgtcggtgtagacgtcgttgaacgaccaga 189
Query: 1191 tcttcttgttgcagtactgctcaacgttggccttgcaggggctgcactcgcggcagcacc 1250
|||||||||||||||||||||| ||||| |||||||| || | ||| |||||||||||||
Sbjct: 188 tcttcttgttgcagtactgctcgacgttcgccttgcacggccggcagtcgcggcagcacc 129
Query: 1251 caacgatcaccccgacgcctaccacgtcgccgacgccgtacttggccacctcgggcccga 1310
| ||||||||||| ||||| |||||||||||||||| ||||||| |||||| |||||||
Sbjct: 128 ccacgatcacccccacgccgaccacgtcgccgacgcggtacttgctcacctccggcccga 69
Query: 1311 cctccaccacctcgccgaccacctcgtgcccagggaccataggatactttgaagccccga 1370
|||||||||||||||| |||||||| ||||| |||||||| |||||||| ||||| || |
Sbjct: 68 cctccaccacctcgccaaccacctcatgccctgggaccatgggatacttggaagcaccca 9
Query: 1371 ggtggttc 1378
||| ||||
Sbjct: 8 ggtcgttc 1
>gb|AL506219.1|AL506219 AL506219 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY02G17T 5',
mRNA sequence
Length = 538
Score = 480 bits (242), Expect = e-134
Identities = 415/469 (88%), Gaps = 3/469 (0%)
Strand = Plus / Minus
Query: 1045 cacgccagcgcacagcagcgg-cgccgcttgctccggagccagacccgccgggatctt-c 1102
|||||| |||||||||||||| |||||| |||||||| || || || || |||||||| |
Sbjct: 538 cacgcccgcgcacagcagcgggcgccgcntgctccggcgcaagcccggcggggatctttc 479
Query: 1103 accacaaacttctgg-tcgacgaccatggtggaggcgaatccaccctgcgtgggccgtcc 1161
||||| ||||||| | ||||||||||||| ||||||||| || |||||||| |||| ||
Sbjct: 478 accacgaacttcttgatcgacgaccatggcggaggcgaagccgccctgcgtcggcctgcc 419
Query: 1162 atcagtgtagacgtcgttgtatgaccagatcttcttgttgcagtactgctcaacgttggc 1221
|| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||
Sbjct: 418 gtcggtgtagacgtcgttgtacgaccagatcttcttgttgcagtactgctcgacgttcgc 359
Query: 1222 cttgcaggggctgcactcgcggcagcacccaacgatcaccccgacgcctaccacgtcgcc 1281
|||||| || | ||| |||||||||||||| ||||||||||| ||||| |||||||||||
Sbjct: 358 cttgcacggccggcagtcgcggcagcaccccacgatcacccccacgccgaccacgtcgcc 299
Query: 1282 gacgccgtacttggccacctcgggcccgacctccaccacctcgccgaccacctcgtgccc 1341
||||| ||||||| |||||| ||||||||||||||||||||||| |||||||| |||||
Sbjct: 298 gacgcggtacttgctcacctccggcccgacctccaccacctcgccaaccacctcatgccc 239
Query: 1342 agggaccataggatactttgaagccccgaggtggttcttggcctggtggatgtccgtgtg 1401
|||||||| |||||||| ||||| || |||| ||||||| |||||||||||||||||||
Sbjct: 238 tgggaccatgggatacttggaagcacccaggtcgttcttgacctggtggatgtccgtgtg 179
Query: 1402 gcagatcccgcagtagagcaccttcaccaccacatcttcagggcctgtgttcctgagggt 1461
||| || |||||||| ||||||| ||||||||||||||||||||| |||||||||||
Sbjct: 178 gcaaatgccgcagtatttaaccttcaacaccacatcttcagggcctgttttcctgagggt 119
Query: 1462 gtaggagtagggggagaggtgtccggtggcgtccctggcggcccacccg 1510
||| | ||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 118 gtatgtgtagggggagaggtggccggtggcgtccctggcggcccacccg 70
>gb|BE455755.3|BE455755 HVSMEg0019K10f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0019K10f, mRNA sequence
Length = 837
Score = 478 bits (241), Expect = e-133
Identities = 496/573 (86%), Gaps = 6/573 (1%)
Strand = Plus / Minus
Query: 942 tggctaccttcacgcccatgtggcccacgccgccgaggcccaggatgccgccacggaggc 1001
|||| ||||||| |||||| |||||||| ||||| ||||||||| | || || || ||||
Sbjct: 666 tggccaccttcaggcccatttggcccaccccgcccaggcccaggttccccccgcgaaggc 607
Query: 1002 ccggggt-cgtcagcccaaagtgcttca-gcgggctgtacaccgtcacg-ccagcgcaca 1058
||||| | |||||| ||||| |||| | ||| ||||| |||||||| || |||||||
Sbjct: 606 ggggggttcatcagccaaaagttgttcaagggggttgtac-ccgtcacggcccgcgcaca 548
Query: 1059 gcagcggcgccgcttgctccggagccagacccgccggg-atcttcaccacaaacttctgg 1117
|||||||||||||||||||||| | || || || ||| ||||||||||| ||||||||
Sbjct: 547 gcagcggcgccgcttgctccggcgaaag-ccggcgggggatcttcaccacgaacttctga 489
Query: 1118 tcgacgaccatggtggaggcgaatccaccctgcgtgggccgtccatcagtgtagacgtcg 1177
||||||||||||| ||||||||| || |||||||| |||| || || ||||||||||||
Sbjct: 488 tcgacgaccatggcggaggcgaagccgccctgcgtcggcctgccgtcggtgtagacgtcg 429
Query: 1178 ttgtatgaccagatcttcttgttgcagtactgctcaacgttggccttgcaggggctgcac 1237
||||| ||||||||||||||||||||||||||||| ||||| |||||||| || | |||
Sbjct: 428 ttgtacgaccagatcttcttgttgcagtactgctcgacgttcgccttgcacggccggcag 369
Query: 1238 tcgcggcagcacccaacgatcaccccgacgcctaccacgtcgccgacgccgtacttggcc 1297
|||||||||||||| ||||||||||| ||||| |||||||||||||||| ||||||| |
Sbjct: 368 tcgcggcagcaccccacgatcacccccacgccgaccacgtcgccgacgcggtacttgctc 309
Query: 1298 acctcgggcccgacctccaccacctcgccgaccacctcgtgcccagggaccataggatac 1357
||||| ||||||||||||||||||||||| |||||||| |||| |||||||| ||||||
Sbjct: 308 acctccggcccgacctccaccacctcgccaaccacctcatgccttgggaccatgggatac 249
Query: 1358 tttgaagccccgaggtggttcttggcctggtggatgtccgtgtggcagatcccgcagtag 1417
|| ||||| || |||| ||||||| |||||||||||||||||||||| || ||||||||
Sbjct: 248 ttggaagcacccaggtcgttcttgacctggtggatgtccgtgtggcaaatgccgcagtat 189
Query: 1418 agcaccttcaccaccacatcttcagggcctgtgttcctgagggtgtaggagtagggggag 1477
||||||| |||||||| |||||||||||| |||||||||||||| | ||||||| ||
Sbjct: 188 ttaaccttcaacaccacattttcagggcctgttttcctgagggtgtatgtgtaggggaag 129
Query: 1478 aggtgtccggtggcgtccctggcggcccacccg 1510
||||| |||||||||||||||||||||||||||
Sbjct: 128 aggtggccggtggcgtccctggcggcccacccg 96
>gb|BF065565.1|BF065565 HV_CEb0012M15f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0012M15f, mRNA sequence
Length = 745
Score = 462 bits (233), Expect = e-128
Identities = 363/405 (89%), Gaps = 1/405 (0%)
Strand = Plus / Minus
Query: 914 atcaccgtcacgtggtggcccatggccttggctaccttcacgcccatgtggcccacgccg 973
||||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||
Sbjct: 594 atcaccgtcacgtggtggcccatggacttggccactttcacgcccatgtggcccacgccg 535
Query: 974 ccgaggcccaggatgccgccacggaggcccggggtcg-tcagcccaaagtgcttcagcgg 1032
|| ||||||||||| ||||| |||||||| |||||| ||||||| ||||||||||||||
Sbjct: 534 cccaggcccaggatcccgccccggaggccgggggtcaatcagccctaagtgcttcagcgg 475
Query: 1033 gctgtacaccgtcacgccagcgcacagcagcggcgccgcttgctccggagccagacccgc 1092
|||||||||||||||||| |||||||||||||||||||| |||||||| || || || ||
Sbjct: 474 gctgtacaccgtcacgcccgcgcacagcagcggcgccgcatgctccggcgcaagcccggc 415
Query: 1093 cgggatcttcaccacaaacttctggtcgacgaccatggtggaggcgaatccaccctgcgt 1152
|||||||||||||| |||||||| ||||||||||||| ||||||||| || ||||||||
Sbjct: 414 ggggatcttcaccacgaacttctgatcgacgaccatggcggaggcgaagccgccctgcgt 355
Query: 1153 gggccgtccatcagtgtagacgtcgttgtatgaccagatcttcttgttgcagtactgctc 1212
|||| || || ||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 354 cggcctgccgtcggtgtagacgtcgttgtacgaccagatcttcttgttgcagtactgctc 295
Query: 1213 aacgttggccttgcaggggctgcactcgcggcagcacccaacgatcaccccgacgcctac 1272
||||| |||||||| || ||| |||||||||||||| ||||||||||| ||||| ||
Sbjct: 294 tacgttcgccttgcacggcgggcagtcgcggcagcaccccacgatcacccccacgccgac 235
Query: 1273 cacgtcgccgacgccgtacttggccacctcgggcccgacctccac 1317
|||||||||||||| ||||||| |||||| ||||||||||||||
Sbjct: 234 cacgtcgccgacgcggtacttgctcacctccggcccgacctccac 190
>gb|CA019762.1|CA019762 HV13A16r HV Hordeum vulgare subsp. vulgare cDNA clone HV13A16
5-PRIME, mRNA sequence
Length = 501
Score = 446 bits (225), Expect = e-123
Identities = 351/393 (89%)
Strand = Plus / Minus
Query: 1118 tcgacgaccatggtggaggcgaatccaccctgcgtgggccgtccatcagtgtagacgtcg 1177
||||||||||||| ||||||||| || |||||||| |||| || || ||||||||||||
Sbjct: 500 tcgacgaccatggcggaggcgaagccgccctgcgtcggcctgccgtcggtgtagacgtcg 441
Query: 1178 ttgtatgaccagatcttcttgttgcagtactgctcaacgttggccttgcaggggctgcac 1237
||||| ||||||||||||||||||||||||||||| ||||| |||||||| || | |||
Sbjct: 440 ttgtacgaccagatcttcttgttgcagtactgctcgacgttcgccttgcacggccggcag 381
Query: 1238 tcgcggcagcacccaacgatcaccccgacgcctaccacgtcgccgacgccgtacttggcc 1297
|||||||||||||| ||||||||||| ||||| |||||||||||||||| ||||||| |
Sbjct: 380 tcgcggcagcaccccacgatcacccccacgccgaccacgtcgccgacgcggtacttgctc 321
Query: 1298 acctcgggcccgacctccaccacctcgccgaccacctcgtgcccagggaccataggatac 1357
||||| ||||||||||||||||||||||| |||||||| ||||| |||||||| ||||||
Sbjct: 320 acctccggcccgacctccaccacctcgccaaccacctcatgccctgggaccatgggatac 261
Query: 1358 tttgaagccccgaggtggttcttggcctggtggatgtccgtgtggcagatcccgcagtag 1417
|| ||||| || |||| ||||||| |||||||||||||||||||||| || ||||||||
Sbjct: 260 ttggaagcacccaggtcgttcttgacctggtggatgtccgtgtggcaaatgccgcagtat 201
Query: 1418 agcaccttcaccaccacatcttcagggcctgtgttcctgagggtgtaggagtagggggag 1477
||||||| ||||||||||||||||||||| |||||||||||||| | ||||||||||
Sbjct: 200 ttaaccttcaacaccacatcttcagggcctgttttcctgagggtgtatgtgtagggggag 141
Query: 1478 aggtgtccggtggcgtccctggcggcccacccg 1510
||||| |||||||||||||||||||||||||||
Sbjct: 140 aggtggccggtggcgtccctggcggcccacccg 108
>gb|BI958350.1|BI958350 HVSMEn0014I18f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0014I18f,
mRNA sequence
Length = 671
Score = 440 bits (222), Expect = e-122
Identities = 357/402 (88%)
Strand = Plus / Minus
Query: 1109 aacttctggtcgacgaccatggtggaggcgaatccaccctgcgtgggccgtccatcagtg 1168
|||||||| |||| |||||||| ||||||||| || |||||||| |||| || || |||
Sbjct: 500 aacttctgatcgaggaccatggcggaggcgaagccgccctgcgtcggcctgccgtcggtg 441
Query: 1169 tagacgtcgttgtatgaccagatcttcttgttgcagtactgctcaacgttggccttgcag 1228
|||| ||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 440 tagatgtcgttgtacgaccagatcttcttgttgcagtactgctcgacgttcgccttgcac 381
Query: 1229 gggctgcactcgcggcagcacccaacgatcaccccgacgcctaccacgtcgccgacgccg 1288
|| | ||| |||||||||||||| ||||||||||| ||||| |||||||||||||||| |
Sbjct: 380 ggccggcagtcgcggcagcaccccacgatcacccccacgccgaccacgtcgccgacgcgg 321
Query: 1289 tacttggccacctcgggcccgacctccaccacctcgccgaccacctcgtgcccagggacc 1348
|||||| |||||| ||||||||||||||||||||||| |||||||| ||||| ||||||
Sbjct: 320 tacttgctcacctccggcccgacctccaccacctcgccaaccacctcatgccctgggacc 261
Query: 1349 ataggatactttgaagccccgaggtggttcttggcctggtggatgtccgtgtggcagatc 1408
|| |||||||| ||||| || |||| ||||||| |||||||||||||||||||||| ||
Sbjct: 260 atgggatacttggaagcacccaggtcgttcttgacctggtggatgtccgtgtggcaaatg 201
Query: 1409 ccgcagtagagcaccttcaccaccacatcttcagggcctgtgttcctgagggtgtaggag 1468
|||||||| ||||||| ||||||||||||||||||||| |||||||||||||| | |
Sbjct: 200 ccgcagtatttaaccttcaacaccacatcttcagggcctgttttcctgagggtgtatgtg 141
Query: 1469 tagggggagaggtgtccggtggcgtccctggcggcccacccg 1510
|||||||||||||| |||||||||||||||||||||||||||
Sbjct: 140 tagggggagaggtggccggtggcgtccctggcggcccacccg 99
>gb|BQ468460.1|BQ468460 HM01F04T HM Hordeum vulgare subsp. vulgare cDNA clone HM01F04
5-PRIME, mRNA sequence
Length = 469
Score = 422 bits (213), Expect = e-116
Identities = 336/377 (89%)
Strand = Plus / Minus
Query: 1134 aggcgaatccaccctgcgtgggccgtccatcagtgtagacgtcgttgtatgaccagatct 1193
||||||| || |||||||| |||| || || ||||||||||||||||| ||||||||||
Sbjct: 469 aggcgaagccgccctgcgtcggcctgccgtcggtgtagacgtcgttgtacgaccagatct 410
Query: 1194 tcttgttgcagtactgctcaacgttggccttgcaggggctgcactcgcggcagcacccaa 1253
||||||||||||||||||| ||||| |||||||| || | ||| |||||||||||||| |
Sbjct: 409 tcttgttgcagtactgctcgacgttcgccttgcacggccggcagtcgcggcagcacccca 350
Query: 1254 cgatcaccccgacgcctaccacgtcgccgacgccgtacttggccacctcgggcccgacct 1313
|||||||||| ||||| |||||||||||||||| ||||||| |||||| ||||||||||
Sbjct: 349 cgatcacccccacgccgaccacgtcgccgacgcggtacttgctcacctccggcccgacct 290
Query: 1314 ccaccacctcgccgaccacctcgtgcccagggaccataggatactttgaagccccgaggt 1373
||||||||||||| |||||||| ||||| |||||||| |||||||| ||||| || ||||
Sbjct: 289 ccaccacctcgccaaccacctcatgccctgggaccatgggatacttggaagcacccaggt 230
Query: 1374 ggttcttggcctggtggatgtccgtgtggcagatcccgcagtagagcaccttcaccacca 1433
||||||| |||||||||||||||||||||| || |||||||| ||||||| |||||
Sbjct: 229 cgttcttgacctggtggatgtccgtgtggcaaatgccgcagtatttaaccttcaacacca 170
Query: 1434 catcttcagggcctgtgttcctgagggtgtaggagtagggggagaggtgtccggtggcgt 1493
|||||||||||||||| |||||||||||||| | ||||||||||||||| ||||||||||
Sbjct: 169 catcttcagggcctgttttcctgagggtgtatgtgtagggggagaggtggccggtggcgt 110
Query: 1494 ccctggcggcccacccg 1510
|||||||||||||||||
Sbjct: 109 ccctggcggcccacccg 93
>gb|BU995486.1|BU995486 HM10G11r HM Hordeum vulgare subsp. vulgare cDNA clone HM10G11
5-PRIME, mRNA sequence
Length = 439
Score = 416 bits (210), Expect = e-114
Identities = 327/366 (89%)
Strand = Plus / Minus
Query: 1145 ccctgcgtgggccgtccatcagtgtagacgtcgttgtatgaccagatcttcttgttgcag 1204
|||||||| |||| || || ||||||||||||||||| |||||||||||||||||||||
Sbjct: 436 ccctgcgtcggcctgccgtcggtgtagacgtcgttgtacgaccagatcttcttgttgcag 377
Query: 1205 tactgctcaacgttggccttgcaggggctgcactcgcggcagcacccaacgatcaccccg 1264
|||||||| ||||| |||||||| || | ||| |||||||||||||| |||||||||||
Sbjct: 376 tactgctcgacgttcgccttgcacggccggcagtcgcggcagcaccccacgatcaccccc 317
Query: 1265 acgcctaccacgtcgccgacgccgtacttggccacctcgggcccgacctccaccacctcg 1324
||||| |||||||||||||||| ||||||| |||||| |||||||||||||||||||||
Sbjct: 316 acgccgaccacgtcgccgacgcggtacttgctcacctccggcccgacctccaccacctcg 257
Query: 1325 ccgaccacctcgtgcccagggaccataggatactttgaagccccgaggtggttcttggcc 1384
|| |||||||| ||||| |||||||| |||||||| ||||| || |||| ||||||| ||
Sbjct: 256 ccaaccacctcatgccctgggaccatgggatacttggaagcacccaggtcgttcttgacc 197
Query: 1385 tggtggatgtccgtgtggcagatcccgcagtagagcaccttcaccaccacatcttcaggg 1444
|||||||||||||||||||| || |||||||| ||||||| ||||||||||||||||
Sbjct: 196 tggtggatgtccgtgtggcaaatgccgcagtatttaaccttcaacaccacatcttcaggg 137
Query: 1445 cctgtgttcctgagggtgtaggagtagggggagaggtgtccggtggcgtccctggcggcc 1504
||||| |||||||||||||| | ||||||||||||||| |||||||||||||||||||||
Sbjct: 136 cctgttttcctgagggtgtatgtgtagggggagaggtggccggtggcgtccctggcggcc 77
Query: 1505 cacccg 1510
||||||
Sbjct: 76 cacccg 71
>gb|BU997581.1|BU997581 HI08G13r HI Hordeum vulgare subsp. vulgare cDNA clone HI08G13
5-PRIME, mRNA sequence
Length = 529
Score = 414 bits (209), Expect = e-114
Identities = 311/345 (90%)
Strand = Plus / Minus
Query: 1166 gtgtagacgtcgttgtatgaccagatcttcttgttgcagtactgctcaacgttggccttg 1225
||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 513 gtgtagacgtcgttgtacgaccagatcttcttgttgcagtactgctcgacgttcgccttg 454
Query: 1226 caggggctgcactcgcggcagcacccaacgatcaccccgacgcctaccacgtcgccgacg 1285
|| || | ||| |||||||||||||| ||||||||||| ||||| |||||||||||||||
Sbjct: 453 cacggccggcagtcgcggcagcaccccacgatcacccccacgccgaccacgtcgccgacg 394
Query: 1286 ccgtacttggccacctcgggcccgacctccaccacctcgccgaccacctcgtgcccaggg 1345
| ||||||| |||||| ||||||||||||||||||||||| |||||||| ||||| |||
Sbjct: 393 cggtacttgctcacctccggcccgacctccaccacctcgccaaccacctcatgccctggg 334
Query: 1346 accataggatactttgaagccccgaggtggttcttggcctggtggatgtccgtgtggcag 1405
||||| |||||||| ||||| || |||| ||||||| ||||||||||||||||||||||
Sbjct: 333 accatgggatacttggaagcacccaggtcgttcttgacctggtggatgtccgtgtggcaa 274
Query: 1406 atcccgcagtagagcaccttcaccaccacatcttcagggcctgtgttcctgagggtgtag 1465
|| |||||||| ||||||| ||||||||||||||||||||| ||||||||||||||
Sbjct: 273 atgccgcagtatttaaccttcaacaccacatcttcagggcctgttttcctgagggtgtat 214
Query: 1466 gagtagggggagaggtgtccggtggcgtccctggcggcccacccg 1510
| ||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 213 gtgtagggggagaggtggccggtggcgtccctggcggcccacccg 169
>gb|CB858813.1|CB858813 HI08G13w HI Hordeum vulgare subsp. vulgare cDNA clone HI08G13
3-PRIME, mRNA sequence
Length = 579
Score = 402 bits (203), Expect = e-110
Identities = 365/419 (87%)
Strand = Plus / Plus
Query: 481 gttgctaccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctccagccgctc 540
|||||| ||||||||||||||||||||||||||||| |||||||||||||| |||| |||
Sbjct: 161 gttgctcccggcgacgtcgacgacgaagcggtagcgcacgtcgttgcgctcgagcctctc 220
Query: 541 cagcgcctcgttcacgtaccccatcttgaccacctcgatctgggaggtgagccccttgtc 600
||||||| ||| ||||| |||||||||| ||||||||||| |||||||||||||||||
Sbjct: 221 gagcgcctggttgacgtagtccatcttgacgacctcgatctgcgaggtgagccccttgtc 280
Query: 601 gacgcagaactgaagcacctcagcggtctcgtcgatgctgccgatgaagctccccgtgat 660
||||||||||| || ||||| | |||||||| ||||| ||||||||||||||||||||
Sbjct: 281 gacgcagaacttgaggacctcctccgtctcgtccatgctcccgatgaagctccccgtgat 340
Query: 661 ggccttccgccccagcatcaccatgggcgacacgaagctcaggggctcgccgatgacgcc 720
|| ||||| ||||||||||||||| || ||||||||||| || ||||| |||| |||||
Sbjct: 341 ggtcttcctccccagcatcaccattggggacacgaagctgagcggctccgcgatcacgcc 400
Query: 721 cagcagcacgagcttgccgtccagcttcagcagcgccaggtacggctccagcgggtggtg 780
|| |||||||||||||||||||| ||| |||||||||||||| |||||||||||||| |
Sbjct: 401 catcagcacgagcttgccgtccatcttgagcagcgccaggtagggctccagcgggtgctt 460
Query: 781 cacgggcaccgtgtcgatgatgtagtccagcgagtcggcggccgcccccatggccgcggc 840
||||||||| |||||||||||||||||||||||||||||||| || |||| ||||
Sbjct: 461 cacgggcacggtgtcgatgatgtagtccagcgagtcggcggcggcggccatctggtcggc 520
Query: 841 gtccgagctcactaggtacgcgtccgcgccgaggtggtccattgcctccgcgcgcttct 899
||| ||||| || |||||| |||| ||||| |||| ||||| ||||| || |||||||
Sbjct: 521 gtcggagctgacgaggtactcgtcggcgcccaggtcgtccacggcctcggcccgcttct 579
>gb|BQ661428.1|BQ661428 HM03H06u HM Hordeum vulgare subsp. vulgare cDNA clone HM03H06
3-PRIME, mRNA sequence
Length = 486
Score = 400 bits (202), Expect = e-110
Identities = 307/342 (89%)
Strand = Plus / Plus
Query: 481 gttgctaccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctccagccgctc 540
|||||| ||||||||||||||||||||||||||||| |||||||||||||| |||| |||
Sbjct: 117 gttgctcccggcgacgtcgacgacgaagcggtagcgcacgtcgttgcgctcgagcctctc 176
Query: 541 cagcgcctcgttcacgtaccccatcttgaccacctcgatctgggaggtgagccccttgtc 600
||||||| ||| ||||| |||||||||| ||||||||||| |||||||||||||||||
Sbjct: 177 gagcgcctggttgacgtagtccatcttgacgacctcgatctgcgaggtgagccccttgtc 236
Query: 601 gacgcagaactgaagcacctcagcggtctcgtcgatgctgccgatgaagctccccgtgat 660
||||||||||| || ||||| | |||||||| ||||| ||||||||||||||||||||
Sbjct: 237 gacgcagaacttgaggacctcctccgtctcgtccatgctcccgatgaagctccccgtgat 296
Query: 661 ggccttccgccccagcatcaccatgggcgacacgaagctcaggggctcgccgatgacgcc 720
|| ||||| ||||||||||||||| || ||||||||||| || ||||| |||| |||||
Sbjct: 297 ggtcttcctccccagcatcaccattggggacacgaagctgagcggctccgcgatcacgcc 356
Query: 721 cagcagcacgagcttgccgtccagcttcagcagcgccaggtacggctccagcgggtggtg 780
|| |||||||||||||||||||| ||| |||||||||||||| |||||||||||||| |
Sbjct: 357 catcagcacgagcttgccgtccatcttgagcagcgccaggtagggctccagcgggtgctt 416
Query: 781 cacgggcaccgtgtcgatgatgtagtccagcgagtcggcggc 822
||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 417 cacgggcacggtgtcgatgatgtagtccagcgagtcggcggc 458
>gb|CB881629.1|CB881629 HM10G11w HM Hordeum vulgare subsp. vulgare cDNA clone HM10G11
3-PRIME, mRNA sequence
Length = 524
Score = 400 bits (202), Expect = e-110
Identities = 307/342 (89%)
Strand = Plus / Plus
Query: 481 gttgctaccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctccagccgctc 540
|||||| ||||||||||||||||||||||||||||| |||||||||||||| |||| |||
Sbjct: 138 gttgctcccggcgacgtcgacgacgaagcggtagcgcacgtcgttgcgctcgagcctctc 197
Query: 541 cagcgcctcgttcacgtaccccatcttgaccacctcgatctgggaggtgagccccttgtc 600
||||||| ||| ||||| |||||||||| ||||||||||| |||||||||||||||||
Sbjct: 198 gagcgcctggttgacgtagtccatcttgacgacctcgatctgcgaggtgagccccttgtc 257
Query: 601 gacgcagaactgaagcacctcagcggtctcgtcgatgctgccgatgaagctccccgtgat 660
||||||||||| || ||||| | |||||||| ||||| ||||||||||||||||||||
Sbjct: 258 gacgcagaacttgaggacctcctccgtctcgtccatgctcccgatgaagctccccgtgat 317
Query: 661 ggccttccgccccagcatcaccatgggcgacacgaagctcaggggctcgccgatgacgcc 720
|| ||||| ||||||||||||||| || ||||||||||| || ||||| |||| |||||
Sbjct: 318 ggtcttcctccccagcatcaccattggggacacgaagctgagcggctccgcgatcacgcc 377
Query: 721 cagcagcacgagcttgccgtccagcttcagcagcgccaggtacggctccagcgggtggtg 780
|| |||||||||||||||||||| ||| |||||||||||||| |||||||||||||| |
Sbjct: 378 catcagcacgagcttgccgtccatcttgagcagcgccaggtagggctccagcgggtgctt 437
Query: 781 cacgggcaccgtgtcgatgatgtagtccagcgagtcggcggc 822
||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 438 cacgggcacggtgtcgatgatgtagtccagcgagtcggcggc 479
>gb|BI957209.1|BI957209 HVSMEn0008C08f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0008C08f,
mRNA sequence
Length = 651
Score = 394 bits (199), Expect = e-108
Identities = 370/425 (87%), Gaps = 2/425 (0%)
Strand = Plus / Minus
Query: 717 cgcccagcagcacgagcttgccgtccagcttcagcagcgccaggtacggctccagcgggt 776
|||||| ||||| |||||||||||||| ||| |||||||||||||| || |||||||| |
Sbjct: 437 cgcccatcagcatgagcttgccgtccatcttgagcagcgccaggtagggttccagcggtt 378
Query: 777 ggtgcacgggcaccgtgtcgatgatgtagtccagcgagtcggcggccgcccccatggccg 836
| | ||||||| | |||||||| |||||||||||||||||||||| || ||||
Sbjct: 377 gcttcacgggcncggtgtcgatattgtagtccagcgagtcggcggcggcggccatctggt 318
Query: 837 cggcgtccgagctcactaggtacgcgtccgcgccgaggtggtccattgcctccgcgcgct 896
||||||| ||||| || |||||| |||| |||| |||| ||||| ||||| || ||||
Sbjct: 317 cggcgtcggagctgacgaggtactcgtcggcgcncaggtcgtccacggcctcggcccgct 258
Query: 897 tcttggacgacgagctgatcaccgtcacgtggtggcccatggccttggctaccttcacgc 956
||||| |||||||||||||||||||||||||||||||||| |||||| ||||||||||
Sbjct: 257 tcttgttggacgagctgatcaccgtcacgtggtggcccatggacttggccaccttcacgc 198
Query: 957 ccatgtggcccacgccgccgaggcccaggatgccgccacggaggcccggggtcgtcagcc 1016
||||||||||||||||||| ||||||||||| ||||| |||||||| |||||| ||||||
Sbjct: 197 ccatgtggcccacgccgcccaggcccaggatcccgccgcggaggccgggggtcatcagcc 138
Query: 1017 caaagtgcttcagcgggctgtacaccgtcacgccagcgcacagcagcggcgccgcttgct 1076
| |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 137 cgaagtgcttcagcgggctgtacaccgtcacgcccgcgcacagcagcggcgccgcctgct 78
Query: 1077 ccgg-agccagacccgccgggatcttcaccacaaacttctggtcgacgaccatggtggag 1135
|||| ||| || || || |||||||||||||| |||||||| |||||||||| || ||||
Sbjct: 77 ccggcagcaagcccggcggggatcttcaccacgaacttctgatcgacgacca-ggcggag 19
Query: 1136 gcgaa 1140
|||||
Sbjct: 18 gcgaa 14
>gb|BI957127.1|BI957127 HVSMEn0007J20f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0007J20f, mRNA sequence
Length = 876
Score = 391 bits (197), Expect = e-107
Identities = 386/449 (85%)
Strand = Plus / Minus
Query: 504 cgaagcggtagcggacgtcgttgcgctccagccgctccagcgcctcgttcacgtacccca 563
|||| |||||||| |||||||||||||| |||| ||| ||||| | ||| ||||| |||
Sbjct: 449 cgaaccggtagcgcacgtcgttgcgctcgagcctctcgagcgcatggttgacgtagtcca 390
Query: 564 tcttgaccacctcgatctgggaggtgagccccttgtcgacgcagaactgaagcacctcag 623
||||||| || | |||||| |||||||||||||||||||||||||||| || |||||
Sbjct: 389 tcttgacgacatagatctgcgaggtgagccccttgtcgacgcagaacttgaggacctcct 330
Query: 624 cggtctcgtcgatgctgccgatgaagctccccgtgatggccttccgccccagcatcacca 683
| |||||||| ||||| |||||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 329 ccgtctcgtccatgctcccgatgaagctccccgtgatggtcttcctccccagcatcacca 270
Query: 684 tgggcgacacgaagctcaggggctcgccgatgacgcccagcagcacgagcttgccgtcca 743
| || ||||||||||| || ||||| |||| ||||||| ||||||||||||||||||||
Sbjct: 269 ttggggacacgaagctgagcggctccgcgatcacgcccatcagcacgagcttgccgtcca 210
Query: 744 gcttcagcagcgccaggtacggctccagcgggtggtgcacgggcaccgtgtcgatgatgt 803
||| |||||||||||||| |||||||||||||| | ||||||||| |||||||||||||
Sbjct: 209 tcttgagcagcgccaggtagggctccagcgggtgcttcacgggcacggtgtcgatgatgt 150
Query: 804 agtccagcgagtcggcggccgcccccatggccgcggcgtccgagctcactaggtacgcgt 863
||||||||||||||||||| || |||| ||||||| ||||| || |||||| |||
Sbjct: 149 agtccagcgagtcggcggcggcggccatctggtcggcgtcggagctgacgaggtactcgt 90
Query: 864 ccgcgccgaggtggtccattgcctccgcgcgcttcttggacgacgagctgatcaccgtca 923
| ||||| |||| ||||| ||||| || |||||| || |||||||||||||||||||
Sbjct: 89 cggcgcccaggtcgtccacggcctcggcccgcttcctgttggacgagctgatcaccgtca 30
Query: 924 cgtggtggcccatggccttggctaccttc 952
||||||||||||||| |||||| ||||||
Sbjct: 29 cgtggtggcccatggacttggccaccttc 1
>gb|BI957159.1|BI957159 HVSMEn0007N14f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0007N14f,
mRNA sequence
Length = 849
Score = 367 bits (185), Expect = e-100
Identities = 305/345 (88%)
Strand = Plus / Minus
Query: 1166 gtgtagacgtcgttgtatgaccagatcttcttgttgcagtactgctcaacgttggccttg 1225
||||||||||||||||| | ||||||||| || |||||||||| || ||||| || |||
Sbjct: 428 gtgtagacgtcgttgtacgcccagatcttggtgctgcagtactggtcgacgttcgctttg 369
Query: 1226 caggggctgcactcgcggcagcacccaacgatcaccccgacgcctaccacgtcgccgacg 1285
|| || ||||| |||||||||||||| |||||||||| ||||| |||||||||||||||
Sbjct: 368 cacggcctgcagtcgcggcagcaccccgcgatcacccccacgccgaccacgtcgccgacg 309
Query: 1286 ccgtacttggccacctcgggcccgacctccaccacctcgccgaccacctcgtgcccaggg 1345
| |||||||| |||||| |||||||| |||||||||||||| |||||||| ||||| |||
Sbjct: 308 cggtacttggtcacctccggcccgacttccaccacctcgccaaccacctcatgccctggg 249
Query: 1346 accataggatactttgaagccccgaggtggttcttggcctggtggatgtccgtgtggcag 1405
||||| |||||||| ||||| || |||| ||||||| ||||||||||||||||||||||
Sbjct: 248 accatgggatacttggaagcacccaggtcgttcttgacctggtggatgtccgtgtggcaa 189
Query: 1406 atcccgcagtagagcaccttcaccaccacatcttcagggcctgtgttcctgagggtgtag 1465
|| |||||||| ||||||| ||||||||||||||||||||| ||||||||||||||
Sbjct: 188 atgccgcagtatttaaccttcaacaccacatcttcagggcctgttttcctgagggtgtat 129
Query: 1466 gagtagggggagaggtgtccggtggcgtccctggcggcccacccg 1510
| ||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 128 gtgtagggggagaggtggccggtggcgtccctggcggcccacccg 84
>gb|BQ760493.1|BQ760493 EBro02_SQ005_D11_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ005_D11 5', mRNA sequence
Length = 434
Score = 359 bits (181), Expect = 2e-097
Identities = 304/345 (88%)
Strand = Plus / Minus
Query: 1166 gtgtagacgtcgttgtatgaccagatcttcttgttgcagtactgctcaacgttggccttg 1225
||||||||||||||||| ||||||||||||||||||||||||||||| ||||| || |||
Sbjct: 430 gtgtagacgtcgttgtacgaccagatcttcttgttgcagtactgctcgacgttcgctttg 371
Query: 1226 caggggctgcactcgcggcagcacccaacgatcaccccgacgcctaccacgtcgccgacg 1285
|| || | ||| | |||||||||||| ||||||||||| ||||| |||| ||||||||||
Sbjct: 370 cacggccggcagtggcggcagcaccccacgatcacccccacgccgaccatgtcgccgacg 311
Query: 1286 ccgtacttggccacctcgggcccgacctccaccacctcgccgaccacctcgtgcccaggg 1345
| ||||||| ||| |||||||||||||||||||| ||||| ||||| || |||| |||
Sbjct: 310 cggtacttgctcacttcgggcccgacctccaccacttcgccaaccacttcatgccgtggg 251
Query: 1346 accataggatactttgaagccccgaggtggttcttggcctggtggatgtccgtgtggcag 1405
||||| |||||||| ||||| || |||| ||||||| ||||||||||||||||||||||
Sbjct: 250 accatgggatacttggaagcacccaggtcgttcttgacctggtggatgtccgtgtggcaa 191
Query: 1406 atcccgcagtagagcaccttcaccaccacatcttcagggcctgtgttcctgagggtgtag 1465
|| |||||||| |||||| ||||||||||||||||||||| ||||||||||||||
Sbjct: 190 atgccgcagtatttacccttcaacaccacatcttcagggcctgttttcctgagggtgtat 131
Query: 1466 gagtagggggagaggtgtccggtggcgtccctggcggcccacccg 1510
| ||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 130 gtgtagggggagaggtggccggtggcgtccctggcggcccacccg 86
>gb|AL510922.1|AL510922 AL510922 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY06G20u 3',
mRNA sequence
Length = 474
Score = 329 bits (166), Expect = 2e-088
Identities = 271/307 (88%)
Strand = Plus / Plus
Query: 481 gttgctaccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctccagccgctc 540
|||||| ||||||||||||||||||||||||||||| |||||||||||||| |||| |||
Sbjct: 168 gttgctcccggcgacgtcgacgacgaagcggtagcgcacgtcgttgcgctcgagcctctc 227
Query: 541 cagcgcctcgttcacgtaccccatcttgaccacctcgatctgggaggtgagccccttgtc 600
||||||| ||| ||||| |||||||||| ||||||||||| |||||||||||||||||
Sbjct: 228 gagcgcctggttgacgtagtccatcttgacgacctcgatctgcgaggtgagccccttgtc 287
Query: 601 gacgcagaactgaagcacctcagcggtctcgtcgatgctgccgatgaagctccccgtgat 660
||||||||||| || ||||| | |||||||| ||||| ||||||||||||||||||||
Sbjct: 288 gacgcagaacttgaggacctcctccgtctcgtccatgctcccgatgaagctccccgtgat 347
Query: 661 ggccttccgccccagcatcaccatgggcgacacgaagctcaggggctcgccgatgacgcc 720
|| ||||| ||||||||||||||| || |||||||| || || ||||| |||| |||||
Sbjct: 348 ggtcttcctccccagcatcaccattggggacacgaancttagcggctccgcgatcacgcc 407
Query: 721 cagcagcacgagcttgccgtccagcttcagcagcgccaggtacggctccagcgggtggtg 780
|| |||||||||||||||||||| ||| ||||||||||||| |||||||||||||| |
Sbjct: 408 catcagcacgagcttgccgtccatcttgagcagcgccaggtnnggctccagcgggtgctt 467
Query: 781 cacgggc 787
|||||||
Sbjct: 468 cacgggc 474
>gb|BQ661689.1|BQ661689 HM04O09u HM Hordeum vulgare subsp. vulgare cDNA clone HM04O09
3-PRIME, mRNA sequence
Length = 525
Score = 313 bits (158), Expect = 1e-083
Identities = 251/282 (89%)
Strand = Plus / Plus
Query: 481 gttgctaccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctccagccgctc 540
|||||| ||||||||||||||||||||||||||||| |||||||||||||| |||| |||
Sbjct: 240 gttgctcccggcgacgtcgacgacgaagcggtagcgcacgtcgttgcgctcgagcctctc 299
Query: 541 cagcgcctcgttcacgtaccccatcttgaccacctcgatctgggaggtgagccccttgtc 600
||||||| ||| ||||| |||||||||| ||||||||||| |||||||||||||||||
Sbjct: 300 gagcgcctggttgacgtagtccatcttgacgacctcgatctgcgaggtgagccccttgtc 359
Query: 601 gacgcagaactgaagcacctcagcggtctcgtcgatgctgccgatgaagctccccgtgat 660
||||||||||| || ||||| | |||||||| ||||| ||||||||||||||||||||
Sbjct: 360 gacgcagaacttgaggacctcctccgtctcgtccatgctcccgatgaagctccccgtgat 419
Query: 661 ggccttccgccccagcatcaccatgggcgacacgaagctcaggggctcgccgatgacgcc 720
|| ||||| ||||||||||||||| || ||||||||||| || ||||| |||| |||||
Sbjct: 420 ggtcttcctccccagcatcaccattggggacacgaagctgagcggctccgcgatcacgcc 479
Query: 721 cagcagcacgagcttgccgtccagcttcagcagcgccaggta 762
|| |||||||||||||||||||| ||| ||||||||||||||
Sbjct: 480 catcagcacgagcttgccgtccatcttgagcagcgccaggta 521
>gb|CK124014.1|CK124014 BES1824106h23 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010H236 5-PRIME, mRNA sequence
Length = 509
Score = 309 bits (156), Expect = 2e-082
Identities = 249/280 (88%)
Strand = Plus / Minus
Query: 481 gttgctaccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctccagccgctc 540
|||||| ||||||||||||||||||||||||||||| |||||||||||||| |||| |||
Sbjct: 280 gttgctcccggcgacgtcgacgacgaagcggtagcgcacgtcgttgcgctcgagcctctc 221
Query: 541 cagcgcctcgttcacgtaccccatcttgaccacctcgatctgggaggtgagccccttgtc 600
||||||| ||| ||||| |||||||||| ||||||||||| |||||||||||||||||
Sbjct: 220 gagcgcctggttgacgtagtccatcttgacgacctcgatctgcgaggtgagccccttgtc 161
Query: 601 gacgcagaactgaagcacctcagcggtctcgtcgatgctgccgatgaagctccccgtgat 660
||||||||||| || ||||| | |||||||| ||||| ||||||||||||||||||||
Sbjct: 160 gacgcagaacttgaggacctcctccgtctcgtccatgctcccgatgaagctccccgtgat 101
Query: 661 ggccttccgccccagcatcaccatgggcgacacgaagctcaggggctcgccgatgacgcc 720
|| ||||| ||||||||||||||| || ||||||||||| || ||||| |||| |||||
Sbjct: 100 ggtcttcctccccagcatcaccattggggacacgaagctgagcggctccgcgatcacgcc 41
Query: 721 cagcagcacgagcttgccgtccagcttcagcagcgccagg 760
|| |||||||||||||||||||| ||| ||||||||||||
Sbjct: 40 catcagcacgagcttgccgtccatcttgagcagcgccagg 1
>gb|BQ758620.1|BQ758620 EBma07_SQ002_F09_R maternal, 21 DPA, no treatment, cv Optic, EBma07
Hordeum vulgare subsp. vulgare cDNA clone
EBma07_SQ002_F09 5', mRNA sequence
Length = 240
Score = 293 bits (148), Expect = 1e-077
Identities = 217/240 (90%)
Strand = Plus / Minus
Query: 951 tcacgcccatgtggcccacgccgccgaggcccaggatgccgccacggaggcccggggtcg 1010
||||||||||||||||||||||||| ||||||||||| ||||| |||||||| ||||||
Sbjct: 240 tcacgcccatgtggcccacgccgcccaggcccaggatcccgccgcggaggccgggggtca 181
Query: 1011 tcagcccaaagtgcttcagcgggctgtacaccgtcacgccagcgcacagcagcggcgccg 1070
||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 180 tcagcccgaagtgcttcagcgggctgtacaccgtcacgcccgcgcacagcagcggcgccg 121
Query: 1071 cttgctccggagccagacccgccgggatcttcaccacaaacttctggtcgacgaccatgg 1130
|||||||||| || || || || |||||||||||||| |||||||| |||||||||||||
Sbjct: 120 cttgctccggcgcaagcccggcggggatcttcaccacgaacttctgatcgacgaccatgg 61
Query: 1131 tggaggcgaatccaccctgcgtgggccgtccatcagtgtagacgtcgttgtatgaccaga 1190
||||||||| || |||||||| |||| || || ||||||||||||||||| |||||||
Sbjct: 60 cggaggcgaagccgccctgcgtcggcctgccgtcggtgtagacgtcgttgtacgaccaga 1
>gb|BI951294.1|BI951294 HVSMEl0025G15f Hordeum vulgare spike EST library HVcDNA0012 (Fusarium
infected) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEl0025G15f, mRNA sequence
Length = 837
Score = 289 bits (146), Expect = 1e-076
Identities = 227/254 (89%)
Strand = Plus / Minus
Query: 1257 tcaccccgacgcctaccacgtcgccgacgccgtacttggccacctcgggcccgacctcca 1316
||||||| ||||| |||||||||| ||||| ||||||| |||||| |||||||||||||
Sbjct: 347 tcacccccacgccgaccacgtcgcagacgcggtacttgatcacctccggcccgacctcca 288
Query: 1317 ccacctcgccgaccacctcgtgcccagggaccataggatactttgaagccccgaggtggt 1376
|||||||||| |||||||| ||||| |||||||| |||||||| ||||| || |||| ||
Sbjct: 287 ccacctcgccaaccacctcatgccctgggaccatgggatacttggaagcacccaggtcgt 228
Query: 1377 tcttggcctggtggatgtccgtgtggcagatcccgcagtagagcaccttcaccaccacat 1436
||||| |||||||||||||||||||||| || |||||||| ||||||| ||||||||
Sbjct: 227 tcttgacctggtggatgtccgtgtggcaaatgccgcagtatttaaccttcaacaccacat 168
Query: 1437 cttcagggcctgtgttcctgagggtgtaggagtagggggagaggtgtccggtggcgtccc 1496
||||||||||||| |||||||||||||| | ||||||||||||||| |||||||||||||
Sbjct: 167 cttcagggcctgttttcctgagggtgtatgtgtagggggagaggtggccggtggcgtccc 108
Query: 1497 tggcggcccacccg 1510
||||||||||||||
Sbjct: 107 tggcggcccacccg 94
>gb|AL507629.1|AL507629 AL507629 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY06G08V 5',
mRNA sequence
Length = 365
Score = 281 bits (142), Expect = 4e-074
Identities = 228/258 (88%)
Strand = Plus / Minus
Query: 1253 acgatcaccccgacgcctaccacgtcgccgacgccgtacttggccacctcgggcccgacc 1312
||||||||||| ||||| ||||||||||||| || ||||||| |||||| |||||||||
Sbjct: 362 acgatcacccccacgccgaccacgtcgccgangcggtacttgctcacctccggcccgacc 303
Query: 1313 tccaccacctcgccgaccacctcgtgcccagggaccataggatactttgaagccccgagg 1372
|||||||||||||| ||||||| ||||| |||||||| |||||||| ||||| || |||
Sbjct: 302 tccaccacctcgccanccacctcatgccctgggaccatgggatacttggaagcacccagg 243
Query: 1373 tggttcttggcctggtggatgtccgtgtggcagatcccgcagtagagcaccttcaccacc 1432
| ||||||| |||||||||||||||||||||| || |||||||| ||||||| ||||
Sbjct: 242 tcgttcttgacctggtggatgtccgtgtggcaaatgccgcagtatttaaccttcaacacc 183
Query: 1433 acatcttcagggcctgtgttcctgagggtgtaggagtagggggagaggtgtccggtggcg 1492
||||||||||||||||| ||||| |||||||| | ||||||||| ||||| |||||||||
Sbjct: 182 acatcttcagggcctgttttcctnagggtgtatgtgtaggggganaggtggccggtggcg 123
Query: 1493 tccctggcggcccacccg 1510
||||||||||||||||||
Sbjct: 122 tccctggcggcccacccg 105
>gb|BF617661.3|BF617661 HVSMEc0018J01f Hordeum vulgare seedling shoot EST library HVcDNA0003
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEc0018J01f, mRNA sequence
Length = 707
Score = 236 bits (119), Expect = 2e-060
Identities = 233/267 (87%), Gaps = 3/267 (1%)
Strand = Plus / Minus
Query: 1185 accagatcttcttgttgcagtactgctcaacgttggccttgcaggggctgcactcgcggc 1244
|||||||||||||| ||||||||||||| ||||| |||||||| || | ||| | |||||
Sbjct: 270 accagatcttcttggtgcagtactgctcgacgttcgccttgcacggccggcagttgcggc 211
Query: 1245 agcaccca-acgatcaccccg-acgcctaccacgtcgccgacgccgtacttggccacctc 1302
||||||| ||||||||||| ||||| |||||||||||||||| ||||||| ||||||
Sbjct: 210 agcacccccacgatcaccccccacgccgaccacgtcgccgacgcggtacttgctcacctc 151
Query: 1303 gggcccgacctccaccacctcgccgaccacctcgtgcccagggaccataggatactttga 1362
||||||||||||||||||||||| |||||||| ||||| |||||||| |||||||| ||
Sbjct: 150 cggcccgacctccaccacctcgccaaccacctcatgccctgggaccatgggatacttgga 91
Query: 1363 agccccgaggtggttcttggcctggtggatgtccgtgtggcagatcccgcagtagagcac 1422
||| || |||| ||||||| |||||||||||||||||||||| || |||||||| ||
Sbjct: 90 agcacccaggtcgttcttgacctggtggatgtccgtgtggcaaatgccgcagtatttaac 31
Query: 1423 cttcaccaccacatcttcagggcctgt 1449
||||| |||||| ||||||||||||||
Sbjct: 30 cttcaacaccac-tcttcagggcctgt 5
>gb|AL509635.1|AL509635 AL509635 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY02G17u 3',
mRNA sequence
Length = 443
Score = 228 bits (115), Expect = 5e-058
Identities = 180/202 (89%)
Strand = Plus / Plus
Query: 481 gttgctaccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctccagccgctc 540
|||||| ||||||||||||||||||||||||||||| |||||||||||||| |||| |||
Sbjct: 242 gttgctcccggcgacgtcgacgacgaagcggtagcgcacgtcgttgcgctcgagcctctc 301
Query: 541 cagcgcctcgttcacgtaccccatcttgaccacctcgatctgggaggtgagccccttgtc 600
||||||| ||| ||||| |||||||||| ||||||||||| |||||||||||||||||
Sbjct: 302 gagcgcctggttgacgtagtccatcttgacgacctcgatctgcgaggtgagccccttgtc 361
Query: 601 gacgcagaactgaagcacctcagcggtctcgtcgatgctgccgatgaagctccccgtgat 660
|||||| |||| || ||||| | |||||||| ||||| ||||||||||||||||||||
Sbjct: 362 gacgcanaacttgaggacctcctccgtctcgtccatgctcccgatgaagctccccgtgat 421
Query: 661 ggccttccgccccagcatcacc 682
|| ||||| |||||||||||||
Sbjct: 422 ggtcttcctccccagcatcacc 443
>gb|BM096821.2|BM096821 EBma07_SQ001_M10_R maternal, 21 DPA, no treatment, cv Optic, EBma07
Hordeum vulgare subsp. vulgare cDNA clone
EBma07_SQ001_M10 5', mRNA sequence
Length = 252
Score = 198 bits (100), Expect = 4e-049
Identities = 151/168 (89%)
Strand = Plus / Minus
Query: 1343 gggaccataggatactttgaagccccgaggtggttcttggcctggtggatgtccgtgtgg 1402
|||||||| |||||||| ||||| || |||| ||||||| ||||||||||||||||||||
Sbjct: 252 gggaccatgggatacttggaagcacccaggtcgttcttgacctggtggatgtccgtgtgg 193
Query: 1403 cagatcccgcagtagagcaccttcaccaccacatcttcagggcctgtgttcctgagggtg 1462
|| || |||||||| ||||||| ||||||||||||||||||||| ||||||||||||
Sbjct: 192 caaatgccgcagtatttaaccttcaacaccacatcttcagggcctgttttcctgagggtg 133
Query: 1463 taggagtagggggagaggtgtccggtggcgtccctggcggcccacccg 1510
|| | ||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 132 tatgtgtagggggagaggtggccggtggcgtccctggcggcccacccg 85
>gb|BQ763215.1|BQ763215 EBro02_SQ007_H14_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ007_H14 5', mRNA sequence
Length = 279
Score = 180 bits (91), Expect = 1e-043
Identities = 160/183 (87%)
Strand = Plus / Minus
Query: 1328 accacctcgtgcccagggaccataggatactttgaagccccgaggtggttcttggcctgg 1387
||||| || ||||| |||||||| |||||||| ||||| || |||| ||||||| |||||
Sbjct: 276 accacttcatgccctgggaccatgggatacttggaagcacccaggtcgttcttgacctgg 217
Query: 1388 tggatgtccgtgtggcagatcccgcagtagagcaccttcaccaccacatcttcagggcct 1447
||||||||||| ||||| || |||||||| || |||| |||||||||||||||||||
Sbjct: 216 tggatgtccgtatggcaaatgccgcagtatttaactttcaacaccacatcttcagggcct 157
Query: 1448 gtgttcctgagggtgtaggagtagggggagaggtgtccggtggcgtccctggcggcccac 1507
|| ||| |||||||||| | ||||||||||||||| ||||||||||||||||||||||||
Sbjct: 156 gttttcttgagggtgtatgtgtagggggagaggtggccggtggcgtccctggcggcccac 97
Query: 1508 ccg 1510
|||
Sbjct: 96 ccg 94
>gb|BE602616.3|BE602616 HVSMEh0100I13f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0100I13f, mRNA sequence
Length = 423
Score = 123 bits (62), Expect = 2e-026
Identities = 92/102 (90%)
Strand = Plus / Minus
Query: 481 gttgctaccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctccagccgctc 540
|||||| ||||||||||||||||||||||||||||| |||||||||||||| |||| |||
Sbjct: 109 gttgctcccggcgacgtcgacgacgaagcggtagcgcacgtcgttgcgctcgagcctctc 50
Query: 541 cagcgcctcgttcacgtaccccatcttgaccacctcgatctg 582
||||||| ||| ||||| |||||||||| |||||||||||
Sbjct: 49 gagcgcctggttgacgtagtccatcttgacgacctcgatctg 8
>gb|BQ661990.1|BQ661990 HR01B24u HR Hordeum vulgare subsp. vulgare cDNA clone HR01B24
3-PRIME, mRNA sequence
Length = 133
Score = 117 bits (59), Expect = 1e-024
Identities = 100/114 (87%)
Strand = Plus / Plus
Query: 481 gttgctaccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctccagccgctc 540
|||||| ||||||||||||||||||||||||||||| |||| ||||||||| |||| ||
Sbjct: 20 gttgctcccggcgacgtcgacgacgaagcggtagcgcacgtagttgcgctcgagcctcta 79
Query: 541 cagcgcctcgttcacgtaccccatcttgaccacctcgatctgggaggtgagccc 594
||||||| ||| ||||| |||||||||| ||||| ||||| |||||||||||
Sbjct: 80 gagcgcctggttgacgtattccatcttgacgacctcnatctgcgaggtgagccc 133
>gb|BM097022.2|BM097022 EBpi07_SQ002_C11_R pistil, 12 DPA, no treatment, cv Optic, EBpi07
Hordeum vulgare subsp. vulgare cDNA clone
EBpi07_SQ002_C11 5', mRNA sequence
Length = 322
Score = 99.6 bits (50), Expect = 3e-019
Identities = 71/78 (91%)
Strand = Plus / Minus
Query: 481 gttgctaccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctccagccgctc 540
|||||| ||||||||||||||||||||||||||||| |||||||||||||| |||| |||
Sbjct: 79 gttgctcccggcgacgtcgacgacgaagcggtagcgcacgtcgttgcgctcgagcctctc 20
Query: 541 cagcgcctcgttcacgta 558
||||||| ||| |||||
Sbjct: 19 gagcgcctggttgacgta 2
>gb|BE213985.3|BE213985 HV_CEb0001N07f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0001N07f, mRNA sequence
Length = 276
Score = 77.8 bits (39), Expect = 1e-012
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 481 gttgctaccggcgacgtcgacgacgaagcggtagcggacgtcgttgc 527
|||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 230 gttgctcccggcgacgtcgacgacgaagcggtagcgcacgtcgttgc 276
>gb|AV917273.1|AV917273 AV917273 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags18d14 5', mRNA sequence
Length = 546
Score = 75.8 bits (38), Expect = 4e-012
Identities = 41/42 (97%)
Strand = Plus / Minus
Query: 488 ccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgc 529
||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 352 ccggcgacgtcgacgacgaagcggtagcgcacgtcgttgcgc 311
Score = 46.1 bits (23), Expect = 0.004
Identities = 71/87 (81%)
Strand = Plus / Minus
Query: 724 cagcacgagcttgccgtccagcttcagcagcgccaggtacggctccagcgggtggtgcac 783
|||||| |||||||||| || ||| |||||| ||||| ||| |||||| ||| ||| |
Sbjct: 116 cagcaccagcttgccgttcaccttgagcagctccaggatgggccccagcgagtgctgcgc 57
Query: 784 gggcaccgtgtcgatgatgtagtccag 810
| |||||||||||| | |||||||||
Sbjct: 56 cgacaccgtgtcgatcacgtagtccag 30
>gb|AV922443.1|AV922443 AV922443 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags18d14 3', mRNA sequence
Length = 520
Score = 75.8 bits (38), Expect = 4e-012
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 488 ccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgc 529
||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 197 ccggcgacgtcgacgacgaagcggtagcgcacgtcgttgcgc 238
Score = 46.1 bits (23), Expect = 0.004
Identities = 71/87 (81%)
Strand = Plus / Plus
Query: 724 cagcacgagcttgccgtccagcttcagcagcgccaggtacggctccagcgggtggtgcac 783
|||||| |||||||||| || ||| |||||| ||||| ||| |||||| ||| ||| |
Sbjct: 433 cagcaccagcttgccgttcaccttgagcagctccaggatgggccccagcgagtgctgcgc 492
Query: 784 gggcaccgtgtcgatgatgtagtccag 810
| |||||||||||| | |||||||||
Sbjct: 493 cgacaccgtgtcgatcacgtagtccag 519
>gb|CB879610.1|CB879610 HP02P10w HP Hordeum vulgare subsp. vulgare cDNA clone HP02P10
3-PRIME, mRNA sequence
Length = 667
Score = 75.8 bits (38), Expect = 4e-012
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 488 ccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgc 529
||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 201 ccggcgacgtcgacgacgaagcggtagcgcacgtcgttgcgc 242
Score = 46.1 bits (23), Expect = 0.004
Identities = 71/87 (81%)
Strand = Plus / Plus
Query: 724 cagcacgagcttgccgtccagcttcagcagcgccaggtacggctccagcgggtggtgcac 783
|||||| |||||||||| || ||| |||||| ||||| ||| |||||| ||| ||| |
Sbjct: 437 cagcacaagcttgccgttcaccttgagcagctccaggatgggccccagcgagtgctgcgc 496
Query: 784 gggcaccgtgtcgatgatgtagtccag 810
| |||||||||||| | |||||||||
Sbjct: 497 cgacaccgtgtcgatcacgtagtccag 523
>gb|BI949722.1|BI949722 HVSMEl0015I24f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0015I24f, mRNA sequence
Length = 561
Score = 61.9 bits (31), Expect = 6e-008
Identities = 76/91 (83%)
Strand = Plus / Minus
Query: 488 ccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctccagccgctccagcgcc 547
||||||||||||| |||||||||||| | |||||||| |||||||||||| | ||||
Sbjct: 254 ccggcgacgtcgatgacgaagcggtacctcacgtcgttcttctccagccgctcgaccgcc 195
Query: 548 tcgttcacgtaccccatcttgaccacctcga 578
||| ||||| |||||||||| |||||||
Sbjct: 194 gtgttgacgtagtccatcttgacgacctcga 164
>gb|BG310264.2|BG310264 HVSMEc0016L11f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0016L11f, mRNA sequence
Length = 758
Score = 61.9 bits (31), Expect = 6e-008
Identities = 76/91 (83%)
Strand = Plus / Plus
Query: 488 ccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctccagccgctccagcgcc 547
||||||||||||| |||||||||||| | |||||||| |||||||||||| | ||||
Sbjct: 364 ccggcgacgtcgatgacgaagcggtacctcacgtcgttcttctccagccgctcgaccgcc 423
Query: 548 tcgttcacgtaccccatcttgaccacctcga 578
||| ||||| |||||||||| |||||||
Sbjct: 424 gtgttgacgtagtccatcttgacgacctcga 454
>gb|BF257150.3|BF257150 HVSMEf0012A06f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0012A06f, mRNA sequence
Length = 852
Score = 61.9 bits (31), Expect = 6e-008
Identities = 76/91 (83%)
Strand = Plus / Minus
Query: 488 ccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctccagccgctccagcgcc 547
||||||||||||| ||||||||||| | |||||||| |||||||||||| | ||||
Sbjct: 483 ccggcgacgtcgatgacgaagcggtccctcacgtcgttcttctccagccgctcgaccgcc 424
Query: 548 tcgttcacgtaccccatcttgaccacctcga 578
||||||||| |||||||||| |||||||
Sbjct: 423 gtgttcacgtagtccatcttgacgacctcga 393
Score = 42.1 bits (21), Expect = 0.058
Identities = 51/61 (83%)
Strand = Plus / Minus
Query: 858 acgcgtccgcgccgaggtggtccattgcctccgcgcgcttcttggacgacgagctgatca 917
||||||| ||||||||| | || | |||||| |||||||| | | ||||||||||||||
Sbjct: 113 acgcgtcggcgccgaggcgctcgagcgcctcctcgcgcttcctcggcgacgagctgatca 54
Query: 918 c 918
|
Sbjct: 53 c 53
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 311,994
Number of Sequences: 312970
Number of extensions: 311994
Number of successful extensions: 116842
Number of sequences better than 0.5: 191
Number of HSP's better than 0.5 without gapping: 191
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 116147
Number of HSP's gapped (non-prelim): 533
length of query: 1669
length of database: 175,134,539
effective HSP length: 19
effective length of query: 1650
effective length of database: 169,188,109
effective search space: 279160379850
effective search space used: 279160379850
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)