BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2306434.2.3
(3914 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CA019440.1|CA019440 HV11P23r HV Hordeum vulgare subsp. v... 517 e-145
gb|BE060794.1|BE060794 HVSMEg0013G05f Hordeum vulgare pre-a... 490 e-136
gb|BU994416.1|BU994416 HM07A02r HM Hordeum vulgare subsp. v... 486 e-135
gb|BI779535.2|BI779535 EBro01_SQ004_F12_R root, 3 week, hyd... 446 e-123
gb|BM372877.2|BM372877 EBma04_SQ002_E01_R maternal, 10 DPA,... 430 e-118
gb|BF258768.2|BF258768 HVSMEf0016K01f Hordeum vulgare seedl... 418 e-115
gb|BU971759.1|BU971759 HB19J12r BC Hordeum vulgare subsp. v... 416 e-114
gb|BU996252.1|BU996252 HM13A10r HM Hordeum vulgare subsp. v... 396 e-108
gb|AL503528.1|AL503528 AL503528 Hordeum vulgare Barke roots... 381 e-103
gb|AV923682.1|AV923682 AV923682 K. Sato unpublished cDNA li... 371 e-100
gb|CA017986.1|CA017986 HV07A23r HV Hordeum vulgare subsp. v... 361 1e-097
gb|BQ469182.1|BQ469182 HM03K08r HM Hordeum vulgare subsp. v... 343 3e-092
gb|BI949437.1|BI949437 HVSMEl0013O09f Hordeum vulgare spike... 341 1e-091
gb|AV917031.1|AV917031 AV917031 K. Sato unpublished cDNA li... 341 1e-091
gb|CA025840.1|CA025840 HZ53E19r HZ Hordeum vulgare subsp. v... 341 1e-091
gb|BU967435.1|BU967435 HB04E22r BC Hordeum vulgare subsp. v... 327 2e-087
gb|CA031178.1|CA031178 HX09D18r HX Hordeum vulgare subsp. v... 325 6e-087
gb|BQ465804.1|BQ465804 HU04L18r HU Hordeum vulgare subsp. v... 323 3e-086
gb|CA009625.1|CA009625 HU14K11r HU Hordeum vulgare subsp. v... 315 6e-084
gb|AL505671.1|AL505671 AL505671 Hordeum vulgare Barke roots... 305 6e-081
gb|BI955734.1|BI955734 HVSMEm0024E12f Hordeum vulgare green... 301 9e-080
gb|BG300950.1|BG300950 HVSMEb0019A22f Hordeum vulgare seedl... 297 1e-078
gb|AJ462437.1|AJ462437 AJ462437 S00002 Hordeum vulgare subs... 291 9e-077
gb|AV927219.1|AV927219 AV927219 K. Sato unpublished cDNA li... 285 5e-075
gb|CA024787.1|CA024787 HZ50E24r HZ Hordeum vulgare subsp. v... 285 5e-075
gb|BF628750.2|BF628750 HVSMEb0007M11f Hordeum vulgare seedl... 281 9e-074
gb|AV836573.1|AV836573 AV836573 K. Sato unpublished cDNA li... 276 5e-072
gb|BQ765797.1|BQ765797 EBro03_SQ008_O01_R root, 3 week, wat... 276 5e-072
gb|AV836609.1|AV836609 AV836609 K. Sato unpublished cDNA li... 272 8e-071
gb|BJ463805.1|BJ463805 BJ463805 K. Sato unpublished cDNA li... 258 1e-066
gb|BI960696.1|BI960696 HVSMEn0025O11f Hordeum vulgare rachi... 244 2e-062
gb|AV923841.1|AV923841 AV923841 K. Sato unpublished cDNA li... 238 1e-060
gb|CA020497.1|CA020497 HZ36H21r HZ Hordeum vulgare subsp. v... 238 1e-060
gb|CA031702.1|CA031702 HX10O05r HX Hordeum vulgare subsp. v... 230 3e-058
gb|BJ447591.1|BJ447591 BJ447591 K. Sato unpublished cDNA li... 222 7e-056
gb|BI957138.1|BI957138 HVSMEn0007L07f Hordeum vulgare rachi... 192 6e-047
gb|BG366351.1|BG366351 HVSMEi0006M09f Hordeum vulgare 20 DA... 174 1e-041
gb|BQ469880.1|BQ469880 HX01C05T HX Hordeum vulgare subsp. v... 174 1e-041
gb|AV910504.1|AV910504 AV910504 K. Sato unpublished cDNA li... 165 1e-038
gb|AV923333.1|AV923333 AV923333 K. Sato unpublished cDNA li... 151 2e-034
gb|AV927371.1|AV927371 AV927371 K. Sato unpublished cDNA li... 151 2e-034
gb|AV928513.1|AV928513 AV928513 K. Sato unpublished cDNA li... 151 2e-034
gb|BF259601.3|BF259601 HVSMEf0019M06f Hordeum vulgare seedl... 149 8e-034
gb|AV918285.1|AV918285 AV918285 K. Sato unpublished cDNA li... 149 8e-034
gb|BJ452844.1|BJ452844 BJ452844 K. Sato unpublished cDNA li... 149 8e-034
gb|BI958555.1|BI958555 HVSMEn0015J16f Hordeum vulgare rachi... 145 1e-032
gb|BM815945.1|BM815945 HC105B07_T3.ab1 HC Hordeum vulgare s... 135 1e-029
gb|BF259974.3|BF259974 HVSMEf0020M07f Hordeum vulgare seedl... 133 5e-029
gb|AL499724.1|AL499724 AL499724 Hordeum vulgare Barke etiol... 131 2e-028
gb|AV930906.1|AV930906 AV930906 K. Sato unpublished cDNA li... 129 8e-028
gb|AV931092.1|AV931092 AV931092 K. Sato unpublished cDNA li... 129 8e-028
gb|AV931093.1|AV931093 AV931093 K. Sato unpublished cDNA li... 129 8e-028
gb|BI776485.2|BI776485 EBpi05_SQ001_J01_R pistil, 8 DPA, no... 129 8e-028
gb|BU967165.1|BU967165 HB03H16r BC Hordeum vulgare subsp. v... 129 8e-028
gb|BU967242.1|BU967242 HB03K11r BC Hordeum vulgare subsp. v... 129 8e-028
gb|CB860194.1|CB860194 HI12P13w HI Hordeum vulgare subsp. v... 129 8e-028
gb|CB876338.1|CB876338 HX10P19w HX Hordeum vulgare subsp. v... 129 8e-028
gb|BQ469740.1|BQ469740 HZ01L16r HZ Hordeum vulgare subsp. v... 127 3e-027
gb|BI779456.2|BI779456 EBro01_SQ004_B14_R root, 3 week, hyd... 125 1e-026
gb|AL503512.1|AL503512 AL503512 Hordeum vulgare Barke roots... 121 2e-025
gb|BG368285.2|BG368285 HVSMEi0017H01f Hordeum vulgare 20 DA... 121 2e-025
gb|AV929091.1|AV929091 AV929091 K. Sato unpublished cDNA li... 121 2e-025
gb|AV931127.1|AV931127 AV931127 K. Sato unpublished cDNA li... 121 2e-025
gb|BJ447699.1|BJ447699 BJ447699 K. Sato unpublished cDNA li... 121 2e-025
gb|BJ455449.1|BJ455449 BJ455449 K. Sato unpublished cDNA li... 121 2e-025
gb|BJ460872.1|BJ460872 BJ460872 K. Sato unpublished cDNA li... 121 2e-025
gb|BQ468619.1|BQ468619 HM01M13T HM Hordeum vulgare subsp. v... 121 2e-025
gb|BQ660756.1|BQ660756 HI05F03u HI Hordeum vulgare subsp. v... 121 2e-025
gb|CA030609.1|CA030609 HX07J05r HX Hordeum vulgare subsp. v... 121 2e-025
gb|CA030647.1|CA030647 HX07L05r HX Hordeum vulgare subsp. v... 121 2e-025
gb|CB875201.1|CB875201 HX07J05w HX Hordeum vulgare subsp. v... 121 2e-025
gb|CB875240.1|CB875240 HX07L05w HX Hordeum vulgare subsp. v... 121 2e-025
gb|BJ468308.1|BJ468308 BJ468308 K. Sato unpublished cDNA li... 117 3e-024
gb|AL503049.1|AL503049 AL503049 Hordeum vulgare Barke roots... 113 5e-023
gb|BQ767053.1|BQ767053 EBro08_SQ007_H22_R root, 3 week, dro... 113 5e-023
gb|BU986849.1|BU986849 HF13B10r HF Hordeum vulgare subsp. v... 113 5e-023
gb|CA027985.1|CA027985 HZ60K07r HZ Hordeum vulgare subsp. v... 111 2e-022
gb|BG369245.1|BG369245 HVSMEi0023G07f Hordeum vulgare 20 DA... 109 7e-022
gb|BG414971.1|BG414971 HVSMEk0004I03f Hordeum vulgare testa... 109 7e-022
gb|BF624748.2|BF624748 HVSMEa0017K05f Hordeum vulgare seedl... 107 3e-021
gb|BG368813.1|BG368813 HVSMEi0020M13f Hordeum vulgare 20 DA... 107 3e-021
gb|AV925770.1|AV925770 AV925770 K. Sato unpublished cDNA li... 107 3e-021
gb|AV926207.1|AV926207 AV926207 K. Sato unpublished cDNA li... 107 3e-021
gb|AV926208.1|AV926208 AV926208 K. Sato unpublished cDNA li... 107 3e-021
gb|BU984513.1|BU984513 HF04C11r HF Hordeum vulgare subsp. v... 107 3e-021
gb|BU988138.1|BU988138 HF16M09r HF Hordeum vulgare subsp. v... 107 3e-021
gb|CA009062.1|CA009062 HU13B03r HU Hordeum vulgare subsp. v... 107 3e-021
gb|CA025257.1|CA025257 HZ51J24r HZ Hordeum vulgare subsp. v... 107 3e-021
gb|BQ464910.1|BQ464910 HU02B19r HU Hordeum vulgare subsp. v... 105 1e-020
gb|BI959339.1|BI959339 HVSMEn0019E20f Hordeum vulgare rachi... 101 2e-019
gb|AV913277.1|AV913277 AV913277 K. Sato unpublished cDNA li... 101 2e-019
gb|AV913278.1|AV913278 AV913278 K. Sato unpublished cDNA li... 101 2e-019
gb|AV914152.1|AV914152 AV914152 K. Sato unpublished cDNA li... 101 2e-019
gb|AV914933.1|AV914933 AV914933 K. Sato unpublished cDNA li... 101 2e-019
gb|AV918571.1|AV918571 AV918571 K. Sato unpublished cDNA li... 101 2e-019
gb|AV918572.1|AV918572 AV918572 K. Sato unpublished cDNA li... 101 2e-019
gb|AV919198.1|AV919198 AV919198 K. Sato unpublished cDNA li... 101 2e-019
gb|AV920051.1|AV920051 AV920051 K. Sato unpublished cDNA li... 101 2e-019
gb|AV925215.1|AV925215 AV925215 K. Sato unpublished cDNA li... 101 2e-019
gb|AV930365.1|AV930365 AV930365 K. Sato unpublished cDNA li... 101 2e-019
gb|AV934882.1|AV934882 AV934882 K. Sato unpublished cDNA li... 101 2e-019
gb|AV936150.1|AV936150 AV936150 K. Sato unpublished cDNA li... 101 2e-019
gb|BM816138.1|BM816138 HC109B12_T3.ab1 HC Hordeum vulgare s... 101 2e-019
gb|BM816139.1|BM816139 HC105G09_T3.ab1 HC Hordeum vulgare s... 101 2e-019
gb|BJ466285.1|BJ466285 BJ466285 K. Sato unpublished cDNA li... 101 2e-019
gb|BQ463573.1|BQ463573 HI05L24r HI Hordeum vulgare subsp. v... 101 2e-019
gb|BQ465284.1|BQ465284 HU03C22r HU Hordeum vulgare subsp. v... 101 2e-019
gb|BM370580.2|BM370580 EBro08_SQ004_K11_R root, 3 week, dro... 101 2e-019
gb|BQ766406.1|BQ766406 EBro08_SQ005_L20_R root, 3 week, dro... 101 2e-019
gb|BU990492.1|BU990492 HF25D10r HF Hordeum vulgare subsp. v... 101 2e-019
gb|CA012990.1|CA012990 HT07B01r HT Hordeum vulgare subsp. v... 101 2e-019
gb|CA017356.1|CA017356 HV12L21u HV Hordeum vulgare subsp. v... 101 2e-019
gb|CK124710.1|CK124710 BES1824110c01 BES1824 Hordeum vulgar... 100 7e-019
gb|BE411751.1|BE411751 ISC008.H06F990806 ITEC ISC Barley Le... 94 4e-017
gb|BF064711.2|BF064711 HV_CEb0017G02f Hordeum vulgare seedl... 94 4e-017
gb|BJ453328.1|BJ453328 BJ453328 K. Sato unpublished cDNA li... 94 4e-017
gb|BQ467842.1|BQ467842 HR01B16r HR Hordeum vulgare subsp. v... 94 4e-017
gb|BQ660846.1|BQ660846 HI05L24u HI Hordeum vulgare subsp. v... 94 4e-017
gb|BI779022.2|BI779022 EBro01_SQ002_J19_R root, 3 week, hyd... 94 4e-017
gb|BU972673.1|BU972673 HB22G06r BC Hordeum vulgare subsp. v... 94 4e-017
gb|BU985115.1|BU985115 HF06C19r HF Hordeum vulgare subsp. v... 94 4e-017
gb|BF258638.2|BF258638 HVSMEf0016E13f Hordeum vulgare seedl... 92 2e-016
gb|BM376392.2|BM376392 EBem05_SQ002_B14_R embryo, 14 DPA, n... 92 2e-016
gb|AL505797.1|AL505797 AL505797 Hordeum vulgare Barke roots... 88 3e-015
gb|BF263370.1|BF263370 HV_CEa0006J03f Hordeum vulgare seedl... 88 3e-015
gb|BE214667.2|BE214667 HV_CEb0004C10f Hordeum vulgare seedl... 88 3e-015
gb|BQ463453.1|BQ463453 HI05F03r HI Hordeum vulgare subsp. v... 88 3e-015
gb|BQ472793.1|BQ472793 HB01H14r BC Hordeum vulgare subsp. v... 88 3e-015
gb|CA009146.1|CA009146 HU13E22r HU Hordeum vulgare subsp. v... 88 3e-015
gb|BE193304.2|BE193304 HVSMEh0080I07f Hordeum vulgare 5-45 ... 86 1e-014
gb|BI956663.1|BI956663 HVSMEn0004K08f Hordeum vulgare rachi... 86 1e-014
gb|BG343763.2|BG343763 HVSMEg0006L01f Hordeum vulgare pre-a... 86 1e-014
gb|BQ663566.1|BQ663566 HU03C22u HU Hordeum vulgare subsp. v... 86 1e-014
gb|BF260649.2|BF260649 HVSMEf0022J05f Hordeum vulgare seedl... 82 2e-013
gb|BQ464113.1|BQ464113 HF01G08T HF Hordeum vulgare subsp. v... 82 2e-013
gb|BQ661318.1|BQ661318 HM02P11u HM Hordeum vulgare subsp. v... 82 2e-013
gb|CB882157.1|CB882157 HL01A17w HL Hordeum vulgare subsp. v... 82 2e-013
gb|BE411894.1|BE411894 ISC010.D05F990917 ITEC ISC Barley Le... 80 6e-013
gb|AV836682.1|AV836682 AV836682 K. Sato unpublished cDNA li... 80 6e-013
gb|BG343963.1|BG343963 HVSMEg0007D23f Hordeum vulgare pre-a... 80 6e-013
gb|BI948889.1|BI948889 HVSMEl0011E15f Hordeum vulgare spike... 80 6e-013
gb|BE060456.3|BE060456 HVSMEg0012F17f Hordeum vulgare pre-a... 80 6e-013
gb|AV932043.1|AV932043 AV932043 K. Sato unpublished cDNA li... 80 6e-013
gb|BM442929.2|BM442929 EBro02_SQ001_O08_R root, 3 week, hyd... 80 6e-013
gb|BQ768380.1|BQ768380 EBro08_SQ011_E16_R root, 3 week, dro... 80 6e-013
gb|CA015150.1|CA015150 HT13H01r HT Hordeum vulgare subsp. v... 80 6e-013
gb|AL504419.1|AL504419 AL504419 Hordeum vulgare Barke roots... 76 1e-011
gb|BI951084.1|BI951084 HVSMEl0024F09f Hordeum vulgare spike... 76 1e-011
gb|BU995821.1|BU995821 HM11H13r HM Hordeum vulgare subsp. v... 76 1e-011
gb|CV061189.1|CV061189 BNEL65h6 Barley EST endosperm librar... 76 1e-011
gb|BG417165.1|BG417165 HVSMEk0016J06f Hordeum vulgare testa... 74 4e-011
gb|BU968059.1|BU968059 HB06E15r BC Hordeum vulgare subsp. v... 74 4e-011
gb|BI959331.1|BI959331 HVSMEn0019E12f Hordeum vulgare rachi... 72 2e-010
gb|AL500926.1|AL500926 AL500926 Hordeum vulgare Barke roots... 70 6e-010
gb|BE216853.1|BE216853 HV_CEb0011N06f Hordeum vulgare seedl... 70 6e-010
gb|BF624752.2|BF624752 HVSMEa0017K09f Hordeum vulgare seedl... 68 2e-009
gb|BG366095.2|BG366095 HVSMEi0005L08f Hordeum vulgare 20 DA... 68 2e-009
gb|BJ464018.1|BJ464018 BJ464018 K. Sato unpublished cDNA li... 68 2e-009
gb|CA031458.1|CA031458 HX10A06r HX Hordeum vulgare subsp. v... 68 2e-009
gb|BI956476.1|BI956476 HVSMEn0003J21f Hordeum vulgare rachi... 66 9e-009
gb|BI958142.1|BI958142 HVSMEn0013J15f Hordeum vulgare rachi... 66 9e-009
gb|BF255020.3|BF255020 HVSMEf0005K21f Hordeum vulgare seedl... 66 9e-009
gb|BQ468970.1|BQ468970 HM02P11r HM Hordeum vulgare subsp. v... 66 9e-009
gb|BM368747.1|BM368747 EBem08_SQ004_H23_R embryo, 40 DPA, n... 64 4e-008
gb|AV836384.1|AV836384 AV836384 K. Sato unpublished cDNA li... 60 6e-007
gb|BQ665967.1|BQ665967 HZ01L16u HZ Hordeum vulgare subsp. v... 60 6e-007
gb|BQ663315.1|BQ663315 HU02B19u HU Hordeum vulgare subsp. v... 58 2e-006
gb|CA011082.1|CA011082 HT07B01u HT Hordeum vulgare subsp. v... 58 2e-006
gb|CA015920.1|CA015920 HV11G20u HV Hordeum vulgare subsp. v... 58 2e-006
gb|BF259426.2|BF259426 HVSMEf0019B07f Hordeum vulgare seedl... 56 9e-006
gb|BQ739972.1|BQ739972 HB107G12 HB Hordeum vulgare subsp. v... 56 9e-006
gb|BU999035.1|BU999035 HI12P13r HI Hordeum vulgare subsp. v... 56 9e-006
gb|CA020225.1|CA020225 HV14L03r HV Hordeum vulgare subsp. v... 56 9e-006
gb|CB882206.1|CB882206 HL01D01w HL Hordeum vulgare subsp. v... 56 9e-006
gb|CB883651.1|CB883651 HQ02O03w HQ Hordeum vulgare subsp. v... 56 9e-006
gb|BI956967.1|BI956967 HVSMEn0006I08f Hordeum vulgare rachi... 54 4e-005
gb|BI960202.1|BI960202 HVSMEn0023K20f Hordeum vulgare rachi... 54 4e-005
gb|CA026701.1|CA026701 HZ56L02r HZ Hordeum vulgare subsp. v... 54 4e-005
gb|CA023762.1|CA023762 HZ47F10r HZ Hordeum vulgare subsp. v... 52 1e-004
gb|AL505318.1|AL505318 AL505318 Hordeum vulgare Barke roots... 50 6e-004
gb|BQ468579.1|BQ468579 HM01K12T HM Hordeum vulgare subsp. v... 50 6e-004
gb|BG299430.2|BG299430 HVSMEa0019P14f Hordeum vulgare seedl... 48 0.002
gb|AW982533.3|AW982533 HVSMEg0003I09f Hordeum vulgare pre-a... 48 0.002
gb|BE195554.3|BE195554 HVSMEh0089G13f Hordeum vulgare 5-45 ... 48 0.002
gb|BG365821.2|BG365821 HVSMEi0004F18f Hordeum vulgare 20 DA... 48 0.002
gb|BM817226.1|BM817226 HC109A10_T3.ab1 HC Hordeum vulgare s... 48 0.002
gb|BI948539.1|BI948539 HVSMEl0010A07f Hordeum vulgare spike... 46 0.009
gb|BQ753947.1|BQ753947 EBca01_SQ002_F04_R carpel, pre-anthe... 46 0.009
gb|CA007306.1|CA007306 HU07H20r HU Hordeum vulgare subsp. v... 46 0.009
gb|CA019471.1|CA019471 HV12B17r HV Hordeum vulgare subsp. v... 46 0.009
gb|BI956576.1|BI956576 HVSMEn0004D17f Hordeum vulgare rachi... 44 0.035
gb|BI959915.1|BI959915 HVSMEn0022F18f Hordeum vulgare rachi... 44 0.035
gb|BE603290.3|BE603290 HVSMEh0102P19f Hordeum vulgare 5-45 ... 44 0.035
gb|BQ467917.1|BQ467917 HR01F13r HR Hordeum vulgare subsp. v... 44 0.035
gb|BM378005.2|BM378005 EBem04_SQ004_N24_R embryo, 12 DPA, n... 44 0.035
gb|BM377206.2|BM377206 EBem05_SQ004_G24_R embryo, 14 DPA, n... 44 0.035
gb|BM371352.2|BM371352 EBma08_SQ002_G11_R maternal, 28 DPA,... 44 0.035
gb|BU994690.1|BU994690 HM07N22r HM Hordeum vulgare subsp. v... 44 0.035
gb|BU998687.1|BU998687 HI11N21r HI Hordeum vulgare subsp. v... 44 0.035
gb|CK124432.1|CK124432 BES1824108o11 BES1824 Hordeum vulgar... 44 0.035
gb|BF261151.2|BF261151 HVSMEf0023O07f Hordeum vulgare seedl... 42 0.14
gb|BG343128.1|BG343128 HVSMEg0002H24f Hordeum vulgare pre-a... 42 0.14
gb|BG366595.1|BG366595 HVSMEi0007J05f Hordeum vulgare 20 DA... 42 0.14
gb|BQ468067.1|BQ468067 HR01N12r HR Hordeum vulgare subsp. v... 42 0.14
gb|BQ471177.1|BQ471177 HV01F24T HV Hordeum vulgare subsp. v... 42 0.14
gb|BQ661984.1|BQ661984 HR01B16u HR Hordeum vulgare subsp. v... 42 0.14
gb|BQ754945.1|BQ754945 EBed02_SQ003_E09_R endosperm, 8 DPA,... 42 0.14
gb|BQ765871.1|BQ765871 EBro03_SQ008_L09_R root, 3 week, wat... 42 0.14
gb|BU997731.1|BU997731 HI08N15r HI Hordeum vulgare subsp. v... 42 0.14
gb|CA018411.1|CA018411 HV08I18r HV Hordeum vulgare subsp. v... 42 0.14
gb|CB883540.1|CB883540 HQ02J01w HQ Hordeum vulgare subsp. v... 42 0.14
gb|CK122216.1|CK122216 BES1824102g23 BES1824 Hordeum vulgar... 42 0.14
>gb|CA019440.1|CA019440 HV11P23r HV Hordeum vulgare subsp. vulgare cDNA clone HV11P23
5-PRIME, mRNA sequence
Length = 619
Score = 517 bits (261), Expect = e-145
Identities = 522/609 (85%)
Strand = Plus / Minus
Query: 1902 agggaactgtacatagcacactttcttccccaccaaaggatccatcatgaaacacatagc 1961
||||||||| ||||| || || ||||| || |||||||||||||||||||||||||| ||
Sbjct: 619 agggaactgcacataacaaaccttctttccgaccaaaggatccatcatgaaacacattgc 560
Query: 1962 ctcttttatggccttgctattgttgatgtagtgatcacagtccaagttcaataggtatgc 2021
|| || | |||||||| ||||| | ||||||||||| |||||||||| | |||||
Sbjct: 559 ttccttgactgccttgctgttgttcacatagtgatcacaatccaagttcagcatgtatgg 500
Query: 2022 agcatttgataagacagcagagacacggaccagtgcattcatggcaccagccttcttgtg 2081
|||||| | || ||||||||||| ||||||| ||| ||||| |||||||||||||||||
Sbjct: 499 agcattagttagtacagcagagacccggaccaatgcgttcatagcaccagccttcttgtg 440
Query: 2082 atggttataacctggcctcttttctctcgagacataaacaaggcgaggcaactcatttcc 2141
||||||||| ||||||| |||||||| || |||||||| | ||||||| |||||||||
Sbjct: 439 atggttatagcctggccgtttttctcttgaaacataaaccaatcgaggcagctcatttcc 380
Query: 2142 ttccacatcacgaccaccactttggccaaggaatacctgaatcattccaggatgatcgcg 2201
|||||||||| | ||||||||||| |||||||| ||||||||||||||||| ||||| ||
Sbjct: 379 ttccacatcaaggccaccactttgaccaaggaagacctgaatcattccagggtgatcacg 320
Query: 2202 tacgttgtttccaggccaggggcttccatcttgcattgtccatccttcctcaggaacctt 2261
|| |||||||| |||||||| | ||||| ||||| |||||||||||||||||||| ||
Sbjct: 319 gacattgtttcctggccagggagtaccatcctgcatggtccatccttcctcaggaacttt 260
Query: 2262 ttgggcttttgcaaccaaggcattgatccttaccttgaattcctcgtattctctcttcat 2321
|||||||| |||||||| |||||||| | | |||||||||||| || |||||||||||
Sbjct: 259 ctgggctttagcaaccaaagcattgattcggatcttgaattcctcatactctctcttcat 200
Query: 2322 cgccctcctctccctaacaaatgaagcagcaaccttgtctttcaggtagtctatcttctg 2381
|| ||||| ||||||||||| | | |||||||||||||||||||||||||||||
Sbjct: 199 tgctctcctgtccctaacaaagtttggtaccaccttgtctttcaggtagtctatcttctg 140
Query: 2382 ttggaagtaccactcaggagcacgaggctcgatattaaactttttgctgaaaggaaccca 2441
||| ||||||||||| |||||||||||||| ||| | |||| || | ||||||||||||
Sbjct: 139 ttgaaagtaccactctggagcacgaggctcaatactgtacttcttacagaaaggaaccca 80
Query: 2442 tttctttgcaaattcagatgtttcagacaatgcttcaaacgtaagcattgcagcaccatc 2501
||||||||||||||||||||||||||||||| |||| || || ||||| |||||||||||
Sbjct: 79 tttctttgcaaattcagatgtttcagacaatccttcgaatgtcagcatggcagcaccatc 20
Query: 2502 atcagaaac 2510
|||||||||
Sbjct: 19 atcagaaac 11
>gb|BE060794.1|BE060794 HVSMEg0013G05f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0013G05f, mRNA sequence
Length = 624
Score = 490 bits (247), Expect = e-136
Identities = 502/587 (85%)
Strand = Plus / Minus
Query: 1990 tagtgatcacagtccaagttcaataggtatgcagcatttgataagacagcagagacacgg 2049
||||||||||| |||||||||| | ||||| |||||| | || |||||||||| |||
Sbjct: 593 tagtgatcacaatccaagttcagcatgtatggagcattagttagtccagcagagacccgg 534
Query: 2050 accagtgcattcatggcaccagccttcttgtgatggttataacctggcctcttttctctc 2109
|||| ||| || || |||||||||||||||| ||||||| |||||| | ||||||||
Sbjct: 533 accaatgcgttaatagcaccagccttcttgtatgggttatagcctggcgttttttctctt 474
Query: 2110 gagacataaacaaggcgaggcaactcatttccttccacatcacgaccaccactttggcca 2169
|| |||||||| | ||||||| ||||||||||||||||||| | ||||||||||| |||
Sbjct: 473 gaaacataaaccaatcgaggcagctcatttccttccacatcaaggccaccactttgacca 414
Query: 2170 aggaatacctgaatcattccaggatgatcgcgtacgttgtttccaggccaggggcttcca 2229
||||| ||||||||||||||||| ||||| || || |||||||| |||||||| | |||
Sbjct: 413 aggaagacctgaatcattccagggtgatcacggacattgtttcctggccagggagtacca 354
Query: 2230 tcttgcattgtccatccttcctcaggaaccttttgggcttttgcaaccaaggcattgatc 2289
|| ||||| |||||||||||||||||||| || |||||||| |||||||||||||||||
Sbjct: 353 tcctgcatggtccatccttcctcaggaactttctgggctttagcaaccaaggcattgatt 294
Query: 2290 cttaccttgaattcctcgtattctctcttcatcgccctcctctccctaacaaatgaagca 2349
| | |||||||||||| || ||||||||||| || ||||| ||||||||||| |
Sbjct: 293 cggatcttgaattcctcatactctctcttcattgctctcctgtccctaacaaagtttggt 234
Query: 2350 gcaaccttgtctttcaggtagtctatcttctgttggaagtaccactcaggagcacgaggc 2409
| |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 233 accaccttgtctttcaggtagtctatcttctgttgaaagtaccactctggagcacgaggc 174
Query: 2410 tcgatattaaactttttgctgaaaggaacccatttctttgcaaattcagatgtttcagac 2469
|| ||| | |||| || | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 tcaatactgtacttcttacagaaaggaacccatttctttgcaaattcagatgtttcagac 114
Query: 2470 aatgcttcaaacgtaagcattgcagcaccatcatcagaaacatagcaggagaccttctca 2529
||| |||| || || ||||| |||||||||||||||||||||||||| |||| ||| |||
Sbjct: 113 aatccttcgaatgtcagcatggcagcaccatcatcagaaacatagcaagagagcttgtca 54
Query: 2530 accggataatccacagaaaggatggaaaggacagtgttcgctgtgac 2576
||||||||||| |||| ||||| || |||| |||||| ||||||||
Sbjct: 53 accggataatctacagccaggatagataggatagtgtttgctgtgac 7
>gb|BU994416.1|BU994416 HM07A02r HM Hordeum vulgare subsp. vulgare cDNA clone HM07A02
5-PRIME, mRNA sequence
Length = 619
Score = 486 bits (245), Expect = e-135
Identities = 525/617 (85%), Gaps = 1/617 (0%)
Strand = Plus / Minus
Query: 1795 acataaatgggcccttgaataccatccaaacctttcatgttgatatcaaaaaagacaacg 1854
||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 616 acatagatggggccttgaataccatccaaacctttcatgttgatatcaaagaagacgacg 557
Query: 1855 ttcctgttagcatatcgatcatgacggtcaataccaccaaacctctgagggaactgtaca 1914
||| |||| ||||||||||||||||||||||| | || || ||||||||||| |||
Sbjct: 556 ttcttgttggcatatcgatcatgacggtcaatggagtcgaatctttgagggaactgcaca 497
Query: 1915 tagcacactttcttccccaccaaaggatccatcatgaaacacatagcctcttttatggcc 1974
|| || || ||||| || |||||||||||||||||||||||||| || || || | |||
Sbjct: 496 taacaaaccttctttccgaccaaaggatccatcatgaaacacattgcttccttgactgcc 437
Query: 1975 ttgctattgttgatgtagtgatcacagtccaagttcaataggtatgcagcatttgataag 2034
||||| ||||| | ||||||||||| |||||||||| | ||||| |||||| | ||
Sbjct: 436 ttgctgttgttcacatagtgatcacaatccaagttcagcatgtatggagcattagttagt 377
Query: 2035 acagcagagacacggaccagtgcattcatggcaccagccttcttgtgatggttataacct 2094
||||||||||| ||||||| ||| ||||| |||||||||||||||||||||||||| |||
Sbjct: 376 acagcagagacccggaccaatgcgttcatagcaccagccttcttgtgatggttatagcct 317
Query: 2095 ggcctcttttctctcgagacataaacaaggcgaggcaactcatttccttccacatcacga 2154
|||| |||||||| || |||||||| | ||||||| ||||||||||||||||||| |
Sbjct: 316 ggccgtttttctcttgaaacataaaccaatcgaggcagctcatttccttccacatcaagg 257
Query: 2155 ccaccactttggccaaggaatacctgaatcattccaggatgatcgcgtacgttgtttcca 2214
||||||||||| |||||||| ||||||||||||||||| ||||| || || ||||||||
Sbjct: 256 ccaccactttgaccaaggaagacctgaatcattccagggtgatcacggacattgtttcct 197
Query: 2215 ggccaggggcttccatcttgcattgtccatccttcctcaggaaccttttgggcttttgca 2274
|||||||| | ||||| ||||| |||||||||||||||||||| || |||||||| |||
Sbjct: 196 ggccagggagtaccatcctgcatggtccatccttcctcaggaactttctgggctttagca 137
Query: 2275 accaaggcattgatccttaccttgaattcctcgtattctctcttcatcgccctcctctcc 2334
||||| |||||||| | | |||||||||||| || ||||||||||| || ||||| |||
Sbjct: 136 accaaagcattgattcggatcttgaattcctcatactctctcttcattgctctcctgtcc 77
Query: 2335 ctaacaaatgaagcagcaaccttgtctttcaggtagtctatcttctgttggaagtaccac 2394
|||||||| | | ||||||||||||||||||||||||||||||| | |||||||
Sbjct: 76 ctaacaaagtttggtaccaccttgtctttcaggtagtctatcttctgttaaaggtaccac 17
Query: 2395 tcaggagcacgaggctc 2411
|| |||||||||||||
Sbjct: 16 tc-tgagcacgaggctc 1
>gb|BI779535.2|BI779535 EBro01_SQ004_F12_R root, 3 week, hydroponic grown, no treatment, cv
Optic, EBro01 Hordeum vulgare subsp. vulgare cDNA clone
EBro01_SQ004_F12 5', mRNA sequence
Length = 596
Score = 446 bits (225), Expect = e-123
Identities = 487/573 (84%), Gaps = 1/573 (0%)
Strand = Plus / Minus
Query: 955 atgcagatgaaaagtgccatgaaccagatactggccacattggtaagctctggtgtgata 1014
|||||||||||||||| |||| ||||||||||||| | ||| |||||||||| |||||
Sbjct: 578 atgcagatgaaaagtgacatgtaccagatactggcaaggttgataagctctggagtgatg 519
Query: 1015 aacttccccgtgagcaggcagatggcaggcaaggtacagtaagccaggagaggaatggac 1074
||||| ||||| | || |||||| || ||||| |||||||||||||| || ||||||||
Sbjct: 518 aacttgcccgttaacaagcagatagcgggcaacgtacagtaagccagaagtggaatggag 459
Query: 1075 gtccagggataaacgatggagttgatataagaaaacctttccaggaattttagcccgccg 1134
||||| ||||| || ||||||||||| || ||||| ||||||| ||||| || || ||
Sbjct: 458 gtccaaggatagacaatggagttgatgtaggaaaatctttccaaaaatttcagtccacca 399
Query: 1135 ccg-tacccgtaccaaagtgggcagtgcttgctgaagaaaatttcgacagacccaagggc 1193
|| ||||| |||||||| ||||| || ||||||||||| || || | ||||||||| ||
Sbjct: 398 cccatacccataccaaagagggcaatggttgctgaagaagatctcaatagacccaagagc 339
Query: 1194 ccagcgaaggacctggtgaagacggtcggaaaggttcagaggcgcagaacctttgaatgc 1253
||| ||||| ||||||| |||||| || ||||| || |||||||||||||| ||||||||
Sbjct: 338 ccaccgaagaacctggttaagacgatctgaaagattgagaggcgcagaacccttgaatgc 279
Query: 1254 aggccgcttcgggatgcagtaaatagaccgccagccatggcagtgcatcttaaatccagt 1313
|||||| || || ||||||||||| || |||||||||||||| ||||||||||| |||||
Sbjct: 278 aggccgtttaggaatgcagtaaattgatcgccagccatggcaatgcatcttaaacccagt 219
Query: 1314 caagatatcctctgtgatcgatccataaatccagccaatctcttttccccagtcggtctt 1373
| |||||||||||| | || ||||| |||||||||||||||||||||||||| |||||
Sbjct: 218 taggatatcctctgtaactgacccatagatccagccaatctcttttccccagtctgtctt 159
Query: 1374 gtcttcgtagccgcagctgataacatgtatagcttccttcagaagagaagctggacttgc 1433
|||||| ||||| || | ||| ||||| ||||||||||||||||||||||| ||||| |
Sbjct: 158 gtcttcatagccacaaccgatgacatggatagcttccttcagaagagaagcaggactatc 99
Query: 1434 gctcttcagggtccctccgttctcaagaagtgttgatgcgacaaaaacagaagactgccc 1493
| | ||||||| || || |||||||||||||| ||||| |||||||| | |||||| ||
Sbjct: 98 acacctcagggttccaccattctcaagaagtgtggatgcaacaaaaacggcagactggcc 39
Query: 1494 aaatttcttctctagtttctgttgatttacaat 1526
||||||||||||||| |||||||| ||||||||
Sbjct: 38 aaatttcttctctagcttctgttggtttacaat 6
>gb|BM372877.2|BM372877 EBma04_SQ002_E01_R maternal, 10 DPA, no treatment, cv Optic, EBma04
Hordeum vulgare subsp. vulgare cDNA clone
EBma04_SQ002_E01 5', mRNA sequence
Length = 477
Score = 430 bits (217), Expect = e-118
Identities = 409/473 (86%)
Strand = Plus / Minus
Query: 1702 ggccagcagttgcaagttcttgatggtggcttctttgttttaggagcatcataaccatat 1761
||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||| ||
Sbjct: 477 ggccagcagttgcaagtccttgacggtggcttctttgttttgggagcatcataaccgtac 418
Query: 1762 agtgcctgccgtctgaaaacacatccagtacccacataaatgggcccttgaataccatcc 1821
|||||||||| |||||| |||||||||||||| ||||| ||||| |||||||||||||||
Sbjct: 417 agtgcctgccttctgaagacacatccagtaccaacatagatggggccttgaataccatcc 358
Query: 1822 aaacctttcatgttgatatcaaaaaagacaacgttcctgttagcatatcgatcatgacgg 1881
||||||||||||||||||||||| ||||| |||||| |||| ||||||||||| ||||||
Sbjct: 357 aaacctttcatgttgatatcaaagaagacgacgttcttgttggcatatcgatcgtgacgg 298
Query: 1882 tcaataccaccaaacctctgagggaactgtacatagcacactttcttccccaccaaagga 1941
||||| | || || ||||||||||| ||||| || || ||||| || |||||||||
Sbjct: 297 tcaatggagtcgaatctttgagggaactgcacataacaaaccttctttccgaccaaagga 238
Query: 1942 tccatcatgaaacacatagcctcttttatggccttgctattgttgatgtagtgatcacag 2001
||||||||||||||||| || || || | |||||||| ||||| | |||||||||||
Sbjct: 237 tccatcatgaaacacattgcttccttgactgccttgctgttgttcacatagtgatcacaa 178
Query: 2002 tccaagttcaataggtatgcagcatttgataagacagcagagacacggaccagtgcattc 2061
|||||||||| | ||||| |||||| | || ||||||||||| ||||||| ||| |||
Sbjct: 177 tccaagttcagcatgtatggagcattagttagtacagcagagacccggaccaatgcgttc 118
Query: 2062 atggcaccagccttcttgtgatggttataacctggcctcttttctctcgagacataaaca 2121
|| |||||||||||||||||||||||||| ||||||| |||||||| || ||||||||
Sbjct: 117 atagcaccagccttcttgtgatggttatagcctggccgtttttctcttgaaacataaacc 58
Query: 2122 aggcgaggcaactcatttccttccacatcacgaccaccactttggccaaggaa 2174
| ||||||| ||||||||||||||||||| | ||||||||||| ||||||||
Sbjct: 57 aatcgaggcagctcatttccttccacatcaaggccaccactttgaccaaggaa 5
>gb|BF258768.2|BF258768 HVSMEf0016K01f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0016K01f, mRNA sequence
Length = 588
Score = 418 bits (211), Expect = e-115
Identities = 484/575 (84%)
Strand = Plus / Minus
Query: 999 aagctctggtgtgataaacttccccgtgagcaggcagatggcaggcaaggtacagtaagc 1058
||||||||| ||||| ||||| ||||| | || |||||| || ||||| |||||||||||
Sbjct: 587 aagctctggagtgatgaacttgcccgttaacaagcagatagcgggcaacgtacagtaagc 528
Query: 1059 caggagaggaatggacgtccagggataaacgatggagttgatataagaaaacctttccag 1118
||| || |||||||| ||||| ||||| || ||||||||||| || ||||| ||||||
Sbjct: 527 cagaagtggaatggaggtccaaggatagacaatggagttgatgtaggaaaatctttccga 468
Query: 1119 gaattttagcccgccgccgtacccgtaccaaagtgggcagtgcttgctgaagaaaatttc 1178
||||| || || || || ||||| |||||||| ||||| || ||||||||||| || ||
Sbjct: 467 aaatttcagtccaccaccatacccataccaaagagggcaatggttgctgaagaagatctc 408
Query: 1179 gacagacccaagggcccagcgaaggacctggtgaagacggtcggaaaggttcagaggcgc 1238
| ||||||||| ||||| ||||| ||||||| |||||| || ||||| || ||||||||
Sbjct: 407 aatagacccaagagcccaccgaagaacctggttaagacgatctgaaagattgagaggcgc 348
Query: 1239 agaacctttgaatgcaggccgcttcgggatgcagtaaatagaccgccagccatggcagtg 1298
|||||| |||||||||||||| || || ||||||||||| || |||||||||||||| ||
Sbjct: 347 agaacccttgaatgcaggccgtttaggaatgcagtaaattgatcgccagccatggcaatg 288
Query: 1299 catcttaaatccagtcaagatatcctctgtgatcgatccataaatccagccaatctcttt 1358
||||||||| ||||| | |||||||||||| | || ||||| |||||||||||||||||
Sbjct: 287 catcttaaacccagttaggatatcctctgtaactgacccatagatccagccaatctcttt 228
Query: 1359 tccccagtcggtcttgtcttcgtagccgcagctgataacatgtatagcttccttcagaag 1418
||||||||| ||||||||||| ||||| || | ||| ||||| |||||||||||||||||
Sbjct: 227 tccccagtctgtcttgtcttcatagccacaaccgatgacatggatagcttccttcagaag 168
Query: 1419 agaagctggacttgcgctcttcagggtccctccgttctcaagaagtgttgatgcgacaaa 1478
|||||| ||||| | | | ||||||| || || |||||||||||||| ||||| |||||
Sbjct: 167 agaagcaggactatcacacctcagggttccaccattctcaagaagtgtggatgcaacaaa 108
Query: 1479 aacagaagactgcccaaatttcttctctagtttctgttgatttacaattccggccttctc 1538
||| | |||||| ||||||||||||||||| |||||||| |||||||| || |||||||
Sbjct: 107 aacggcagactggccaaatttcttctctagcttctgttggtttacaataccagccttctg 48
Query: 1539 gatatcagcacctggagcaccttcatcaatttcac 1573
| ||||| |||| || |||||||||||||||
Sbjct: 47 agtttcagctcctgcggcggcttcatcaatttcac 13
>gb|BU971759.1|BU971759 HB19J12r BC Hordeum vulgare subsp. vulgare cDNA clone HB19J12
5-PRIME, mRNA sequence
Length = 649
Score = 416 bits (210), Expect = e-114
Identities = 513/614 (83%)
Strand = Plus / Minus
Query: 487 acccacaggagcgagaagatcgaggccagcaggatggaccagacgatgacgatcgtcggc 546
|||||||||||||||| |||||| |||| |||||||||||||||||| |||||||||||
Sbjct: 629 acccacaggagcgagatgatcgaagccaacaggatggaccagacgatcacgatcgtcggg 570
Query: 547 gtcctgttctgcctccccaccagacccttgaggaacgggtacaggtggacgatcacccag 606
|||||||||||||| |||| |||||||||||||||||||||||| || || |||||||||
Sbjct: 569 gtcctgttctgccttcccaacagacccttgaggaacgggtacagatgaacaatcacccag 510
Query: 607 aaggcgaagaagagcttcccgaacagggggccccacgactcgtacccgttgttgatcgcg 666
|| |||||||||||||||||||| || || ||||| || || || ||||||||||| |||
Sbjct: 509 aacgcgaagaagagcttcccgaagagaggcccccatgattcatatccgttgttgattgcg 450
Query: 667 ttcgagatcccggccaccaccccgatgaagttcagcaggaggagcgtggtcgggggtatc 726
|| ||||| || || ||||| ||||||||||||||||| || || ||||||||||| |||
Sbjct: 449 ttggagatgccagcaaccacaccgatgaagttcagcagaagcagggtggtcgggggaatc 390
Query: 727 agcagggtggtccacttgaacgtgtacagctccgagaactcctcgtcgtccccggccttc 786
| || ||| ||||| ||||| || |||||||| || |||||||| || || ||||||||
Sbjct: 389 aacaaggttgtccatttgaatgtatacagctcagaaaactcctcatcatctccggccttt 330
Query: 787 gacgtcacggtgaagctcgtgtcgatgccggcgagcaccttcagcaggccctggaacacc 846
| || ||||||||||| ||||| | || || | |||||| || || || ||||||||
Sbjct: 329 gttgtgacggtgaagctagtgtccacaccagctatcaccttgagaagtccttggaacacg 270
Query: 847 gcgaacagatgcgccgaaacgcctccgatgacccagaactgctcgttcctccaccagtcg 906
|| || ||||| || || || ||||| |||||||||||||||||||| |||||||| |||
Sbjct: 269 gcaaatagatgggcagagacacctccaatgacccagaactgctcgtttctccaccaatcg 210
Query: 907 tcgatggccacgccactccacctcatttccaggatgccggtcacggagatgcagatgaaa 966
|| | || || | | ||| ||||||||||| || || || || | ||||||||||||
Sbjct: 209 tcaactgcgacacgagcccatctcatttccagaatacccgtagcgaaaatgcagatgaaa 150
Query: 967 agtgccatgaaccagatactggccacattggtaagctctggtgtgataaacttccccgtg 1026
|||| |||| ||||||||||||| | ||| |||||||||| ||||| ||||| |||||
Sbjct: 149 agtgacatgtaccagatactggcaaggttgctaagctctggagtgatgaacttgcccgtt 90
Query: 1027 agcaggcagatggcaggcaaggtacagtaagccaggagaggaatggacgtccagggataa 1086
| || |||||| || ||||| |||||||||||||| || |||||||| ||||| |||||
Sbjct: 89 aacaagcagatagcgggcaacgtacagtaagccagaagtggaatggaggtccaaggatag 30
Query: 1087 acgatggagttgat 1100
|| |||||||||||
Sbjct: 29 acaatggagttgat 16
>gb|BU996252.1|BU996252 HM13A10r HM Hordeum vulgare subsp. vulgare cDNA clone HM13A10
5-PRIME, mRNA sequence
Length = 629
Score = 396 bits (200), Expect = e-108
Identities = 371/428 (86%)
Strand = Plus / Minus
Query: 1693 caccacttgggccagcagttgcaagttcttgatggtggcttctttgttttaggagcatca 1752
|||||||| ||||||||||||||||| ||||| ||||||||||||||||| |||||||||
Sbjct: 447 caccactttggccagcagttgcaagtccttgacggtggcttctttgttttgggagcatca 388
Query: 1753 taaccatatagtgcctgccgtctgaaaacacatccagtacccacataaatgggcccttga 1812
||||| || |||||||||| |||||| |||||||||||||| ||||| ||||| ||||||
Sbjct: 387 taaccgtacagtgcctgccttctgaagacacatccagtaccaacatagatggggccttga 328
Query: 1813 ataccatccaaacctttcatgttgatatcaaaaaagacaacgttcctgttagcatatcga 1872
|||||||||||||||||||||||||||||||| ||||| |||||| |||| |||||||||
Sbjct: 327 ataccatccaaacctttcatgttgatatcaaagaagacgacgttcttgttggcatatcga 268
Query: 1873 tcatgacggtcaataccaccaaacctctgagggaactgtacatagcacactttcttcccc 1932
|||||||||||||| | || || ||||||||||| ||||| || || ||||| ||
Sbjct: 267 tcatgacggtcaatggagtcgaatctttgagggaactgcacataacaaaccttctttccg 208
Query: 1933 accaaaggatccatcatgaaacacatagcctcttttatggccttgctattgttgatgtag 1992
|||||||||||||||||||||||||| || || || | |||||||| ||||| | |||
Sbjct: 207 accaaaggatccatcatgaaacacattgcttccttgactgccttgctgttgttcacatag 148
Query: 1993 tgatcacagtccaagttcaataggtatgcagcatttgataagacagcagagacacggacc 2052
|||||||| |||||||||| | ||||| |||||| | || ||||||||||| ||||||
Sbjct: 147 tgatcacaatccaagttcagcatgtatggagcattagttagtacagcagagacccggacc 88
Query: 2053 agtgcattcatggcaccagccttcttgtgatggttataacctggcctcttttctctcgag 2112
| ||| ||||| |||||||||||||||||||||||||| ||||||| |||||||| ||
Sbjct: 87 aatgcgttcatagcaccagccttcttgtgatggttatagcctggccgtttttctcttgaa 28
Query: 2113 acataaac 2120
||||||||
Sbjct: 27 acataaac 20
>gb|AL503528.1|AL503528 AL503528 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW02H13T 5', mRNA sequence
Length = 700
Score = 381 bits (192), Expect = e-103
Identities = 458/544 (84%), Gaps = 2/544 (0%)
Strand = Plus / Minus
Query: 1032 gcagatggcaggcaaggtacagtaagccaggagaggaatggacg-tccagggataaacga 1090
|||||| || ||||| |||||||||||||| || |||||||| | |||| ||||| || |
Sbjct: 688 gcagatagcgggcaacgtacagtaagccagaagtggaatggaaggtccaaggatagacca 629
Query: 1091 -tggagttgatataagaaaacctttccaggaattttagcccgccgccgtacccgtaccaa 1149
|||||||||| || ||||| ||||||| ||||| || || || || ||||| ||||||
Sbjct: 628 atggagttgatgtaggaaaatctttccaaaaatttcagtccaccaccatacccataccaa 569
Query: 1150 agtgggcagtgcttgctgaagaaaatttcgacagacccaagggcccagcgaaggacctgg 1209
|| ||||| || ||||||||||| || || | ||||||||| ||||| ||||| ||||||
Sbjct: 568 agagggcaatggttgctgaagaagatctcaatagacccaagagcccaccgaagaacctgg 509
Query: 1210 tgaagacggtcggaaaggttcagaggcgcagaacctttgaatgcaggccgcttcgggatg 1269
| |||||| || ||||| || |||||||||||||| |||||||||||||| || || |||
Sbjct: 508 ttaagacgatctgaaagattgagaggcgcagaacccttgaatgcaggccgtttaggaatg 449
Query: 1270 cagtaaatagaccgccagccatggcagtgcatcttaaatccagtcaagatatcctctgtg 1329
|||||||| || |||||||||||||| ||||||||||| ||||| | ||||||||||||
Sbjct: 448 cagtaaattgatcgccagccatggcaatgcatcttaaacccagttaggatatcctctgta 389
Query: 1330 atcgatccataaatccagccaatctcttttccccagtcggtcttgtcttcgtagccgcag 1389
| || ||||| |||||||||||||||||||||||||| ||||||||||| ||||| ||
Sbjct: 388 actgacccatagatccagccaatctcttttccccagtctgtcttgtcttcatagccacaa 329
Query: 1390 ctgataacatgtatagcttccttcagaagagaagctggacttgcgctcttcagggtccct 1449
| ||| ||||| ||||||||||||||||||||||| ||||| | | | ||||||| ||
Sbjct: 328 ccgatgacatggatagcttccttcagaagagaagcaggactatcacacctcagggttcca 269
Query: 1450 ccgttctcaagaagtgttgatgcgacaaaaacagaagactgcccaaatttcttctctagt 1509
|| |||||||||||||| ||||| |||||||| | |||||| |||||||||||||||||
Sbjct: 268 ccattctcaagaagtgtggatgcaacaaaaacggcagactggccaaatttcttctctagc 209
Query: 1510 ttctgttgatttacaattccggccttctcgatatcagcacctggagcaccttcatcaatt 1569
|||||||| |||||||| || ||||||| | ||||| |||| || |||||||||||
Sbjct: 208 ttctgttggtttacaataccagccttctgagtttcagctcctgcggcggcttcatcaatt 149
Query: 1570 tcac 1573
||||
Sbjct: 148 tcac 145
>gb|AV923682.1|AV923682 AV923682 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp. vulgare
cDNA clone basd1a04 5', mRNA sequence
Length = 476
Score = 371 bits (187), Expect = e-100
Identities = 405/475 (85%), Gaps = 2/475 (0%)
Strand = Plus / Minus
Query: 1773 tctgaaaacacatcc-agtacccacataaatgggcccttgaataccatccaaacctttca 1831
|||||| |||||||| |||||| ||||| ||||| |||||||||||||||||||||||||
Sbjct: 475 tctgaagacacatcccagtaccaacatagatggggccttgaataccatccaaacctttca 416
Query: 1832 tgttgatatcaaaaaagacaacgttcctgttagcatatcgatcatgacggtcaataccac 1891
||||||||||||| ||||| |||||| |||| ||||||||||| |||||||||||
Sbjct: 415 tgttgatatcaaagaagacgacgttcttgttggcatatcgatcgtgacggtcaatggagt 356
Query: 1892 caaacctctgagggaactgtacatagcacactttcttccccaccaaaggatccatcatga 1951
| || || ||||||||||| ||||| || || ||||| || |||||||||||||||||||
Sbjct: 355 cgaatctttgagggaactgcacataacaaaccttctttccgaccaaaggatccatcatga 296
Query: 1952 aacacatagcctcttttatggccttgctattgttgatgtagtgatcacagtccaagttca 2011
||||||| || || || | |||||||| ||||| | ||||||||||| ||||||||||
Sbjct: 295 aacacattgcttccttgactgccttgctgttgttcacatagtgatcacaatccaagttca 236
Query: 2012 ataggtatgcagcatttgataagacagcagagacacggaccagtgcattcatggcaccag 2071
| ||||| |||||| | || ||||||||||| ||||||| ||| ||||| |||||||
Sbjct: 235 gcatgtatggagcattagttagtacagcagagacccggaccaatgcgttcatagcaccag 176
Query: 2072 ccttcttgtgatggttataacctggcctcttttctctcgagacataaacaaggcgaggca 2131
||||||||||||||||||| ||||||| |||||||| || |||||||| | |||||||
Sbjct: 175 ccttcttgtgatggttatagcctggccgtttttctcttgaaacataaaccaatcgaggca 116
Query: 2132 actcatttccttccacatcacgaccaccactttggccaaggaatacctgaatcattccag 2191
||||||||||||||||||| | ||||||||||| |||||||| ||||||||||||||||
Sbjct: 115 gctcatttccttccacatcaaggccaccactttgaccaaggaagacctgaatcattccag 56
Query: 2192 gatgatcgcgtacgttgtttccaggccaggggcttccatcttgcattgtccatcc 2246
| ||||| || || |||||||| |||||||| | ||||| ||||| ||||||||
Sbjct: 55 ggtgatcacggacattgtttcc-ggccagggagtaccatcctgcatggtccatcc 2
>gb|CA017986.1|CA017986 HV07A23r HV Hordeum vulgare subsp. vulgare cDNA clone HV07A23
5-PRIME, mRNA sequence
Length = 569
Score = 361 bits (182), Expect = 1e-097
Identities = 471/570 (82%), Gaps = 2/570 (0%)
Strand = Plus / Minus
Query: 1941 atccatcatgaaacacatagcctcttttatggccttgctattgttgatgtagtgatcaca 2000
|||||||||||||||||| || || || | |||||||| ||||| | ||||||| ||
Sbjct: 569 atccatcatgaaacacattgcttccttgactgccttgctgttgttcacatagtgatnnca 510
Query: 2001 gtccaagttcaataggtatgcagcatttgataagacagcagagacacggaccagtgcatt 2060
|||||||||| | ||||| |||||| | || ||||||||||| ||||||| ||| ||
Sbjct: 509 atccaagttcagcatgtatggagcattagttagtacagcagagacccggaccaatgcgtt 450
Query: 2061 catggcaccagccttcttgtgatggttataacctggcctcttttctctcgagacataaac 2120
||| ||||| |||||||||||||||||| ||||||| |||||||| || ||||||||
Sbjct: 449 catagcaccnnncttcttgtgatggttatagcctggccgtttttctcttgaaacataaac 390
Query: 2121 aaggcgaggcaactcatttccttccacatcacgaccaccactttggccaaggaatacctg 2180
| ||||||| ||||||||||| ||||| | ||||||||||| |||||||| |||||
Sbjct: 389 caatcgaggcagctcatttccttnnncatcaaggccaccactttgaccaaggaagacctg 330
Query: 2181 aatcattccaggatgatcgcgtacgttgtttccaggccaggggcttccatcttgcattgt 2240
|||||||||||| ||||| || || |||||||| |||| | | ||||| ||||| ||
Sbjct: 329 aatcattccagggtgatcacggacattgtttcctggcccnngagtaccatcctgcatggt 270
Query: 2241 ccatccttcctcaggaaccttttgggcttttgcaaccaaggcattgatccttaccttgaa 2300
|||||||||||||||||| || |||||||| |||||||| |||| || | | ||||||
Sbjct: 269 ccatccttcctcaggaactttctgggctttagcaaccaaagcatnnattcggatcttgaa 210
Query: 2301 ttcctcgtattctctcttcatcgccctcctctccctaacaaatgaagcagcaaccttgtc 2360
|||||| || ||||||||||| || ||||| ||||||||||| | | ||||||
Sbjct: 209 ttcctcatactctctcttcattgctctcctgtccctaacaaagtttggtacnnncttgtc 150
Query: 2361 tttcaggtagtctatcttctgttggaagtaccactcaggagcacgaggctcgatattaaa 2420
|||||||||||||||||||||||| ||||||||||| |||||||||||||| ||| |
Sbjct: 149 tttcaggtagtctatcttctgttgaaagtaccactctggagcacgaggctcaatact-gt 91
Query: 2421 ctttttgctgaaaggaacccatttctttgcaaattcagatgtttcagacaatgcttcaaa 2480
||| || | |||| | |||||||||||||||||||||||||||||||||||| |||| ||
Sbjct: 90 cttcttacagaaa-gnacccatttctttgcaaattcagatgtttcagacaatccttcgaa 32
Query: 2481 cgtaagcattgcagcaccatcatcagaaac 2510
|| ||||| ||||||||||||||||||||
Sbjct: 31 tgtcagcatggcagcaccatcatcagaaac 2
>gb|BQ469182.1|BQ469182 HM03K08r HM Hordeum vulgare subsp. vulgare cDNA clone HM03K08
5-PRIME, mRNA sequence
Length = 660
Score = 343 bits (173), Expect = 3e-092
Identities = 524/641 (81%)
Strand = Plus / Minus
Query: 598 atcacccagaaggcgaagaagagcttcccgaacagggggccccacgactcgtacccgttg 657
||||||||||| |||||||||||||||||||| || || ||||| || || || ||||||
Sbjct: 651 atcacccagaacgcgaagaagagcttcccgaagagaggcccccatgattcatatccgttg 592
Query: 658 ttgatcgcgttcgagatcccggccaccaccccgatgaagttcagcaggaggagcgtggtc 717
||||| ||||| ||||| || || ||||| ||||||||||||||||| || || ||||||
Sbjct: 591 ttgattgcgttggagatgccagcaaccacaccgatgaagttcagcagaagcagggtggtc 532
Query: 718 gggggtatcagcagggtggtccacttgaacgtgtacagctccgagaactcctcgtcgtcc 777
||||| |||| || ||| ||||| ||||| || |||||||| || |||||||| || ||
Sbjct: 531 gggggaatcaacaaggttgtccatttgaatgtatacagctcagaaaactcctcatcatct 472
Query: 778 ccggccttcgacgtcacggtgaagctcgtgtcgatgccggcgagcaccttcagcaggccc 837
|||||||| | || ||||||||||| ||||| | || || | |||||| || || ||
Sbjct: 471 ccggcctttgttgtgacggtgaagctagtgtccacaccagctatcaccttgagaagtcct 412
Query: 838 tggaacaccgcgaacagatgcgccgaaacgcctccgatgacccagaactgctcgttcctc 897
|||||||| || || ||||| || || || ||||| |||||||||||||||||||| |||
Sbjct: 411 tggaacacggcaaatagatgggcagagacacctccaatgacccagaactgctcgtttctc 352
Query: 898 caccagtcgtcgatggccacgccactccacctcatttccaggatgccggtcacggagatg 957
||||| ||||| | || || | | ||| ||||||||||| || || || || | |||
Sbjct: 351 caccaatcgtcaactgcgacacgagcccatctcatttccagaatacccgtagcgaaaatg 292
Query: 958 cagatgaaaagtgccatgaaccagatactggccacattggtaagctctggtgtgataaac 1017
||||||||||||| |||| ||||||||||||| | ||| |||||||||| ||||| |||
Sbjct: 291 cagatgaaaagtgacatgtaccagatactggcaaggttgctaagctctggagtgatgaac 232
Query: 1018 ttccccgtgagcaggcagatggcaggcaaggtacagtaagccaggagaggaatggacgtc 1077
|| ||||| | || |||||| || ||||| |||||||||||||| || |||||||| |||
Sbjct: 231 ttgcccgttaacaagcagatagcgggcaacgtacagtaagccagaagtggaatggaggtc 172
Query: 1078 cagggataaacgatggagttgatataagaaaacctttccaggaattttagcccgccgccg 1137
|| ||||| || ||||||||||| || ||||| ||||||| ||||| || || || ||
Sbjct: 171 caaggatagacaatggagttgatgtaggaaaatctttccaaaaatttcagtccaccacca 112
Query: 1138 tacccgtaccaaagtgggcagtgcttgctgaagaaaatttcgacagacccaagggcccag 1197
||||| |||||||| ||||| || ||||||||||| || || | ||||||||| |||||
Sbjct: 111 tacccataccaaagagggcaatggttgctgaagaagatctcaatagacccaagagcccac 52
Query: 1198 cgaaggacctggtgaagacggtcggaaaggttcagaggcgc 1238
||||| ||||||| |||||| || ||||| || ||||||||
Sbjct: 51 cgaagaacctggttaagacgatctgaaagattgagaggcgc 11
>gb|BI949437.1|BI949437 HVSMEl0013O09f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0013O09f, mRNA sequence
Length = 938
Score = 341 bits (172), Expect = 1e-091
Identities = 334/388 (86%)
Strand = Plus / Minus
Query: 422 tgcagtccaggccacactcctccaggagcgggccgttgctcttggcgaggaacgggtcga 481
|||||||||| || ||||||||||| || ||||||| | ||||||||||||| |||| |
Sbjct: 448 tgcagtccagaccgcactcctccagaagagggccgtcggtcttggcgaggaaagggttca 389
Query: 482 cgcggacccacaggagcgagaagatcgaggccagcaggatggaccagacgatgacgatcg 541
| || |||||||||||||||| |||||| |||| |||||||||||||||||| |||||||
Sbjct: 388 cacgcacccacaggagcgagatgatcgaagccaacaggatggaccagacgatcacgatcg 329
Query: 542 tcggcgtcctgttctgcctccccaccagacccttgaggaacgggtacaggtggacgatca 601
|||| |||||||||||||| |||| |||||||||||||||||||||||| || || ||||
Sbjct: 328 tcggggtcctgttctgccttcccaacagacccttgaggaacgggtacagatgaacaatca 269
Query: 602 cccagaaggcgaagaagagcttcccgaacagggggccccacgactcgtacccgttgttga 661
||||||| |||||||||||||||||||| || || ||||| || || || ||||||||||
Sbjct: 268 cccagaacgcgaagaagagcttcccgaagagaggcccccatgattcatatccgttgttga 209
Query: 662 tcgcgttcgagatcccggccaccaccccgatgaagttcagcaggaggagcgtggtcgggg 721
| ||||| ||||| || || ||||| ||||||||||||||||| || || ||||||||||
Sbjct: 208 ttgcgttggagatgccagcaaccacaccgatgaagttcagcagaagcagggtggtcgggg 149
Query: 722 gtatcagcagggtggtccacttgaacgtgtacagctccgagaactcctcgtcgtccccgg 781
| |||| || ||| ||||| ||||| ||||||||||| || |||||||| || || ||||
Sbjct: 148 gaatcaacaaggttgtccatttgaatgtgtacagctcagaaaactcctcatcatctccgg 89
Query: 782 ccttcgacgtcacggtgaagctcgtgtc 809
|||| | || ||||||||||| |||||
Sbjct: 88 cctttgttgtgacggtgaagctagtgtc 61
>gb|AV917031.1|AV917031 AV917031 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20i09 5', mRNA sequence
Length = 579
Score = 341 bits (172), Expect = 1e-091
Identities = 334/388 (86%)
Strand = Plus / Minus
Query: 422 tgcagtccaggccacactcctccaggagcgggccgttgctcttggcgaggaacgggtcga 481
|||||||||| || ||||||||||| || ||||||| | ||||||||||||| |||| |
Sbjct: 416 tgcagtccagaccgcactcctccagaagagggccgtcggtcttggcgaggaaagggttca 357
Query: 482 cgcggacccacaggagcgagaagatcgaggccagcaggatggaccagacgatgacgatcg 541
| || |||||||||||||||| |||||| |||| |||||||||||||||||| |||||||
Sbjct: 356 cacgcacccacaggagcgagatgatcgaagccaacaggatggaccagacgatcacgatcg 297
Query: 542 tcggcgtcctgttctgcctccccaccagacccttgaggaacgggtacaggtggacgatca 601
|||| |||||||||||||| |||| |||||||||||||||||||||||| || || ||||
Sbjct: 296 tcggggtcctgttctgccttcccaacagacccttgaggaacgggtacagatgaacaatca 237
Query: 602 cccagaaggcgaagaagagcttcccgaacagggggccccacgactcgtacccgttgttga 661
||||||| |||||||||||||||||||| || || ||||| || || || ||||||||||
Sbjct: 236 cccagaacgcgaagaagagcttcccgaagagaggcccccatgattcatatccgttgttga 177
Query: 662 tcgcgttcgagatcccggccaccaccccgatgaagttcagcaggaggagcgtggtcgggg 721
| ||||| ||||| || || ||||| ||||||||||||||||| || || ||||||||||
Sbjct: 176 ttgcgttggagatgccagcaaccacaccgatgaagttcagcagaagcagggtggtcgggg 117
Query: 722 gtatcagcagggtggtccacttgaacgtgtacagctccgagaactcctcgtcgtccccgg 781
| |||| || ||| ||||| ||||| ||||||||||| || |||||||| || || ||||
Sbjct: 116 gaatcaacaaggttgtccatttgaatgtgtacagctcagaaaactcctcatcatctccgg 57
Query: 782 ccttcgacgtcacggtgaagctcgtgtc 809
|||| | || ||||||||||| |||||
Sbjct: 56 cctttgttgtgacggtgaagctagtgtc 29
>gb|CA025840.1|CA025840 HZ53E19r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ53E19
5-PRIME, mRNA sequence
Length = 456
Score = 341 bits (172), Expect = 1e-091
Identities = 379/448 (84%)
Strand = Plus / Minus
Query: 461 tcttggcgaggaacgggtcgacgcggacccacaggagcgagaagatcgaggccagcagga 520
||||||||||||| |||| || || |||||||||||||||| |||||| |||| |||||
Sbjct: 453 tcttggcgaggaaagggttcacacgcacccacaggagcgagatgatcgaagccaacagga 394
Query: 521 tggaccagacgatgacgatcgtcggcgtcctgttctgcctccccaccagacccttgagga 580
||||||||||||| ||||||||||| |||||||||||||| |||| ||||||||||||||
Sbjct: 393 tggaccagacgatcacgatcgtcggggtcctgttctgccttcccaacagacccttgagga 334
Query: 581 acgggtacaggtggacgatcacccagaaggcgaagaagagcttcccgaacagggggcccc 640
|||||||||| || || ||||||||||| |||||||||||||||||||| || || ||||
Sbjct: 333 acgggtacagatgaacaatcacccagaacgcgaagaagagcttcccgaagagaggccccc 274
Query: 641 acgactcgtacccgttgttgatcgcgttcgagatcccggccaccaccccgatgaagttca 700
| || || || ||||||||||| ||||| ||||| || || ||||| |||||||||||||
Sbjct: 273 atgattcatatccgttgttgattgcgttggagatgccagcaaccacaccgatgaagttca 214
Query: 701 gcaggaggagcgtggtcgggggtatcagcagggtggtccacttgaacgtgtacagctccg 760
|||| || || ||||||||||| |||| || ||| ||||| ||||| || |||||||| |
Sbjct: 213 gcagaagcagggtggtcgggggaatcaacaaggttgtccatttgaatgtatacagctcag 154
Query: 761 agaactcctcgtcgtccccggccttcgacgtcacggtgaagctcgtgtcgatgccggcga 820
| |||||||| || || |||||||| | || ||||||||||| ||||| | || || |
Sbjct: 153 aaaactcctcatcatctccggcctttgttgtgacggtgaagctagtgtccacaccagcta 94
Query: 821 gcaccttcagcaggccctggaacaccgcgaacagatgcgccgaaacgcctccgatgaccc 880
|||||| || || || |||||||| || || ||||| || || || ||||| |||||||
Sbjct: 93 tcaccttgagaagtccttggaacacggcaaatagatgggcagagacacctccaatgaccc 34
Query: 881 agaactgctcgttcctccaccagtcgtc 908
||||||||||||| |||||||| |||||
Sbjct: 33 agaactgctcgtttctccaccaatcgtc 6
>gb|BU967435.1|BU967435 HB04E22r BC Hordeum vulgare subsp. vulgare cDNA clone HB04E22
5-PRIME, mRNA sequence
Length = 634
Score = 327 bits (165), Expect = 2e-087
Identities = 312/361 (86%)
Strand = Plus / Minus
Query: 1693 caccacttgggccagcagttgcaagttcttgatggtggcttctttgttttaggagcatca 1752
|||||||| ||||||||||||||||| ||||| ||||||||||||||||| |||||||||
Sbjct: 379 caccactttggccagcagttgcaagtccttgacggtggcttctttgttttgggagcatca 320
Query: 1753 taaccatatagtgcctgccgtctgaaaacacatccagtacccacataaatgggcccttga 1812
||||| || |||||||||| |||||| |||||||||||||| ||||| ||||| ||||||
Sbjct: 319 taaccgtacagtgcctgccttctgaagacacatccagtaccaacatagatggggccttga 260
Query: 1813 ataccatccaaacctttcatgttgatatcaaaaaagacaacgttcctgttagcatatcga 1872
|||||||||||||||||||||||||||||||| ||||| |||||| |||| |||||||||
Sbjct: 259 ataccatccaaacctttcatgttgatatcaaagaagacgacgttcttgttggcatatcga 200
Query: 1873 tcatgacggtcaataccaccaaacctctgagggaactgtacatagcacactttcttcccc 1932
|||||||||||||| | || || ||||||||||| ||||| || || ||||| ||
Sbjct: 199 tcatgacggtcaatggagtcgaatctttgagggaactgcacataacaaaccttctttccg 140
Query: 1933 accaaaggatccatcatgaaacacatagcctcttttatggccttgctattgttgatgtag 1992
|||||||||||||||||||||||||| || || || | |||||||| ||||| | |||
Sbjct: 139 accaaaggatccatcatgaaacacattgcttccttgactgccttgctgttgttcacatag 80
Query: 1993 tgatcacagtccaagttcaataggtatgcagcatttgataagacagcagagacacggacc 2052
|||||||| |||||||||| | ||||| |||||| | || ||||||||||| ||||||
Sbjct: 79 tgatcacaatccaagttcagcatgtatggagcattagttagtacagcagagacccggacc 20
Query: 2053 a 2053
|
Sbjct: 19 a 19
Score = 85.7 bits (43), Expect = 1e-014
Identities = 103/122 (84%), Gaps = 1/122 (0%)
Strand = Plus / Minus
Query: 1453 ttctcaagaagtgttgatgcgacaaaaacaga-agactgcccaaatttcttctctagttt 1511
|||||||||||||| ||||| |||||||| | |||||| ||||||||||||||||| ||
Sbjct: 623 ttctcaagaagtgtggatgcaacaaaaacggncagactggccaaatttcttctctagctt 564
Query: 1512 ctgttgatttacaattccggccttctcgatatcagcacctggagcaccttcatcaatttc 1571
|||||| |||||||| || ||||||| | ||||| |||| || |||||||||||||
Sbjct: 563 ctgttggtttacaataccagccttctgagtttcagctcctgcggcggcttcatcaatttc 504
Query: 1572 ac 1573
||
Sbjct: 503 ac 502
>gb|CA031178.1|CA031178 HX09D18r HX Hordeum vulgare subsp. vulgare cDNA clone HX09D18
5-PRIME, mRNA sequence
Length = 654
Score = 325 bits (164), Expect = 6e-087
Identities = 335/392 (85%)
Strand = Plus / Minus
Query: 1182 agacccaagggcccagcgaaggacctggtgaagacggtcggaaaggttcagaggcgcaga 1241
||||||||| ||||| ||||| ||||||| |||||| || ||||| || |||||||||||
Sbjct: 650 agacccaagagcccaccgaagaacctggttaagacgatctgaaagattgagaggcgcaga 591
Query: 1242 acctttgaatgcaggccgcttcgggatgcagtaaatagaccgccagccatggcagtgcat 1301
||| |||||||||||||| || || ||||||||||| || |||||||||||||| |||||
Sbjct: 590 acccttgaatgcaggccgtttaggaatgcagtaaattgatcgccagccatggcaatgcat 531
Query: 1302 cttaaatccagtcaagatatcctctgtgatcgatccataaatccagccaatctcttttcc 1361
|||||| ||||| | |||||||||||| | || ||||| ||||||||||||||||||||
Sbjct: 530 cttaaacccagttaggatatcctctgtaactgacccatagatccagccaatctcttttcc 471
Query: 1362 ccagtcggtcttgtcttcgtagccgcagctgataacatgtatagcttccttcagaagaga 1421
|||||| ||||||||||| ||||| || | ||| ||||| ||||||||||||||||||||
Sbjct: 470 ccagtctgtcttgtcttcatagccacaaccgatgacatggatagcttccttcagaagaga 411
Query: 1422 agctggacttgcgctcttcagggtccctccgttctcaagaagtgttgatgcgacaaaaac 1481
||| ||||| | | | ||||||| || || |||||||||||||| ||||| ||||||||
Sbjct: 410 agcaggactatcacacctcagggttccaccattctcaagaagtgtggatgcaacaaaaac 351
Query: 1482 agaagactgcccaaatttcttctctagtttctgttgatttacaattccggccttctcgat 1541
| |||||| ||||||||||||||||| |||||||| |||||||| || ||||||| |
Sbjct: 350 ggcagactggccaaatttcttctctagcttctgttggtttacaataccagccttctgagt 291
Query: 1542 atcagcacctggagcaccttcatcaatttcac 1573
||||| |||| || |||||||||||||||
Sbjct: 290 ttcagctcctgcggcggcttcatcaatttcac 259
Score = 137 bits (69), Expect = 3e-030
Identities = 102/113 (90%)
Strand = Plus / Minus
Query: 1693 caccacttgggccagcagttgcaagttcttgatggtggcttctttgttttaggagcatca 1752
|||||||| ||||||||||||||||| ||||| ||||||||||||||||| |||||||||
Sbjct: 136 caccactttggccagcagttgcaagtccttgacggtggcttctttgttttgggagcatca 77
Query: 1753 taaccatatagtgcctgccgtctgaaaacacatccagtacccacataaatggg 1805
||||| || |||||||||| ||| || |||||||||||||| ||||| |||||
Sbjct: 76 taaccgtacagtgcctgccttctcaagacacatccagtaccaacatagatggg 24
>gb|BQ465804.1|BQ465804 HU04L18r HU Hordeum vulgare subsp. vulgare cDNA clone HU04L18
5-PRIME, mRNA sequence
Length = 644
Score = 323 bits (163), Expect = 3e-086
Identities = 515/631 (81%), Gaps = 1/631 (0%)
Strand = Plus / Minus
Query: 580 aacgggtacaggtggacgatcacccagaaggcgaagaagagcttcccgaacagggggccc 639
||||||||||| || || ||||||||||| |||||||||||||||||||| || || |||
Sbjct: 644 aacgggtacagatgaacaatcacccagaacgcgaagaagagcttcccgaagagaggcccc 585
Query: 640 cacgactcgtacccgttgttgatcgcgttcgagatcccggccaccaccccgatgaagttc 699
|| || || || ||||||||||| ||||| ||||| || || ||||| ||||||||||||
Sbjct: 584 catgattcatatccgttgttgattgcgttggagatgccagcaaccacaccgatgaagttc 525
Query: 700 agcaggaggagcgtggtcgggggtatcagcagggtggtccacttgaacgtgtacagctcc 759
||||| || || ||||||||||| |||| || ||| ||||| ||||| || ||||||||
Sbjct: 524 agcagaagcagggtggtcgggggaatcaacaaggttgtccatttgaatgtatacagctca 465
Query: 760 gagaactcctcgtcgtccccggccttcgacgtcacggtgaagctcgtgtcgatgccggcg 819
|| |||||||| || || |||||||| | || ||||||||||| ||||| | || ||
Sbjct: 464 gaaaactcctcatcatctccggcctttgttgtgacggtgaagctagtgtccacaccagct 405
Query: 820 agcaccttcagcaggccctggaacaccgcgaacagatgcgccgaaacgcctccgatgacc 879
| |||||| || || || |||||||| || || ||||| || || || ||||| ||||||
Sbjct: 404 atcaccttgagaagtccttggaacacggcaaatagatgggcagagacacctccaatgacc 345
Query: 880 cagaactgctcgttcctccaccagtcgtcgatggccacgccactccacctcatttccagg 939
|||||||||||||| |||||||| ||||| | || || | | ||| |||||||||||
Sbjct: 344 cagaactgctcgtttctccaccaatcgtcaactgcgacacgagcccatctcatttccaga 285
Query: 940 atgccggtcacggagatgcagatgaaaagtgccatgaaccagatactggccacattggta 999
|| || || || | |||||||||||||||| |||| ||||||||||||| | ||| ||
Sbjct: 284 atacccgtagcgaaaatgcagatgaaaagtgacatgtaccagatactggcaaggttgcta 225
Query: 1000 agctctggtgtgataaacttccccgtgagcaggcagatggcaggcaaggtacagtaagcc 1059
|||||||| ||||| ||||| ||||| | || |||||| || ||||| ||||||||||||
Sbjct: 224 agctctggagtgatgaacttgcccgttaacaagcagatagcgggcaacgtacagtaagcc 165
Query: 1060 aggagaggaatggacgtccagggataaacgatggagttgatataagaaaacctttccagg 1119
|| || |||||||| ||||| ||||| || ||||||||||| || ||||| |||||||
Sbjct: 164 agaagtggaatggaggtccaaggatagacaatggagttgatgtaggaaaatctttccaaa 105
Query: 1120 aattttagcccgccgccgtacccgtaccaaagtgggcagtgcttgctgaagaaaatttcg 1179
||||| || || || || ||||| |||||||| ||||| || ||||| ||||| || ||
Sbjct: 104 aatttcagtccaccaccatacccataccaaagagggcaatggttgct-aagaagatctca 46
Query: 1180 acagacccaagggcccagcgaaggacctggt 1210
| ||||||||| ||||| ||||| |||||||
Sbjct: 45 atagacccaagagcccaccgaagaacctggt 15
>gb|CA009625.1|CA009625 HU14K11r HU Hordeum vulgare subsp. vulgare cDNA clone HU14K11
5-PRIME, mRNA sequence
Length = 586
Score = 315 bits (159), Expect = 6e-084
Identities = 279/319 (87%)
Strand = Plus / Minus
Query: 1693 caccacttgggccagcagttgcaagttcttgatggtggcttctttgttttaggagcatca 1752
|||||||| ||||||||||||||||| ||||| ||||||||||||||||| |||||||||
Sbjct: 347 caccactttggccagcagttgcaagtccttgacggtggcttctttgttttgggagcatca 288
Query: 1753 taaccatatagtgcctgccgtctgaaaacacatccagtacccacataaatgggcccttga 1812
||||| || |||||||||| |||||| |||||||||||||| ||||| ||||| ||||||
Sbjct: 287 taaccgtacagtgcctgccttctgaagacacatccagtaccaacatagatggggccttga 228
Query: 1813 ataccatccaaacctttcatgttgatatcaaaaaagacaacgttcctgttagcatatcga 1872
|||||||||||||||||||||||||||||||| ||||| |||||| |||| |||||||||
Sbjct: 227 ataccatccaaacctttcatgttgatatcaaagaagacgacgttcttgttggcatatcga 168
Query: 1873 tcatgacggtcaataccaccaaacctctgagggaactgtacatagcacactttcttcccc 1932
|||||||||||||| | || || ||||||||||| ||||| || || ||||| ||
Sbjct: 167 tcatgacggtcaatggagtcgaatctttgagggaactgcacataacaaaccttctttccg 108
Query: 1933 accaaaggatccatcatgaaacacatagcctcttttatggccttgctattgttgatgtag 1992
|||||||||||||||||||||||||| || || || | |||||||| ||||| | |||
Sbjct: 107 accaaaggatccatcatgaaacacattgcttccttgactgccttgctgttgttcacatag 48
Query: 1993 tgatcacagtccaagttca 2011
|||||||| ||||||||||
Sbjct: 47 tgatcacaatccaagttca 29
Score = 89.7 bits (45), Expect = 7e-016
Identities = 99/117 (84%)
Strand = Plus / Minus
Query: 1457 caagaagtgttgatgcgacaaaaacagaagactgcccaaatttcttctctagtttctgtt 1516
|||||||||| ||||| |||||||| | |||||| ||||||||||||||||| |||||||
Sbjct: 586 caagaagtgtggatgcaacaaaaacggcagactggccaaatttcttctctagcttctgtt 527
Query: 1517 gatttacaattccggccttctcgatatcagcacctggagcaccttcatcaatttcac 1573
| |||||||| || ||||||| | ||||| |||| || |||||||||||||||
Sbjct: 526 ggtttacaataccagccttctgagtttcagctcctgcggcggcttcatcaatttcac 470
>gb|AL505671.1|AL505671 AL505671 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW09C19V 5', mRNA sequence
Length = 497
Score = 305 bits (154), Expect = 6e-081
Identities = 334/393 (84%), Gaps = 1/393 (0%)
Strand = Plus / Minus
Query: 1182 agacccaagggcccagc-gaaggacctggtgaagacggtcggaaaggttcagaggcgcag 1240
||||||||| ||||| | |||| ||||||| |||||| || ||||| || ||||||||||
Sbjct: 481 agacccaagagcccacccgaagaacctggttaagacgatctgaaagattgagaggcgcag 422
Query: 1241 aacctttgaatgcaggccgcttcgggatgcagtaaatagaccgccagccatggcagtgca 1300
|||| |||||||||||||| || || ||||||||||| || |||||||||||||| ||||
Sbjct: 421 aacccttgaatgcaggccgtttaggaatgcagtaaattgatcgccagccatggcaatgca 362
Query: 1301 tcttaaatccagtcaagatatcctctgtgatcgatccataaatccagccaatctcttttc 1360
||||||| ||||| | |||||||||||| | || ||||| |||||||||||||||||||
Sbjct: 361 tcttaaacccagttaggatatcctctgtaactgacccatagatccagccaatctcttttc 302
Query: 1361 cccagtcggtcttgtcttcgtagccgcagctgataacatgtatagcttccttcagaagag 1420
||||||| ||||||||||| ||||| || | ||| ||||| |||||||||||||||||||
Sbjct: 301 cccagtctgtcttgtcttcatagccacaaccgatgacatggatagcttccttcagaagag 242
Query: 1421 aagctggacttgcgctcttcagggtccctccgttctcaagaagtgttgatgcgacaaaaa 1480
|||| ||||| | | | ||||||| || || |||||||||||||| ||||| |||||||
Sbjct: 241 aagcaggactatcacacctcagggttccaccattctcaagaagtgtggatgcaacaaaaa 182
Query: 1481 cagaagactgcccaaatttcttctctagtttctgttgatttacaattccggccttctcga 1540
| | |||||| ||||||||||||||||| |||||||| ||| |||| || |||||||
Sbjct: 181 cggcagactggccaaatttcttctctagcttctgttggtttncaataccagccttctgag 122
Query: 1541 tatcagcacctggagcaccttcatcaatttcac 1573
| ||||| |||| || |||||||||||||||
Sbjct: 121 tttcagctcctgcggcggcttcatcaatttcac 89
>gb|BI955734.1|BI955734 HVSMEm0024E12f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0024E12f, mRNA sequence
Length = 707
Score = 301 bits (152), Expect = 9e-080
Identities = 330/388 (85%), Gaps = 1/388 (0%)
Strand = Plus / Minus
Query: 422 tgcagtccaggccacactcctccaggagcgggccgttgctcttggcgaggaacgggtcga 481
|||||||||| || ||||||||||| || ||||||| | ||| ||||||||| |||| |
Sbjct: 469 tgcagtccagaccgcactcctccagaagagggccgtcggtct-ggcgaggaaagggttca 411
Query: 482 cgcggacccacaggagcgagaagatcgaggccagcaggatggaccagacgatgacgatcg 541
| || |||||||||||||||| |||||| |||| |||||||||||||||||| |||||||
Sbjct: 410 cacgcacccacaggagcgagatgatcgaagccaacaggatggaccagacgatcacgatcg 351
Query: 542 tcggcgtcctgttctgcctccccaccagacccttgaggaacgggtacaggtggacgatca 601
|||| |||||||||||||| |||| |||||||||||||||||||||||| || || ||||
Sbjct: 350 tcggggtcctgttctgccttcccaacagacccttgaggaacgggtacagatgaacaatca 291
Query: 602 cccagaaggcgaagaagagcttcccgaacagggggccccacgactcgtacccgttgttga 661
||||||| |||||||||||||||||||| || || ||||| || || || ||||||||||
Sbjct: 290 cccagaacgcgaagaagagcttcccgaagagaggcccccatgattcatatccgttgttga 231
Query: 662 tcgcgttcgagatcccggccaccaccccgatgaagttcagcaggaggagcgtggtcgggg 721
| ||||| ||||| || || ||||| ||||||||||||||||| || || ||||||| |
Sbjct: 230 ttgcgttggagatgccagcaaccacaccgatgaagttcagcagaagcagggtggtcgccg 171
Query: 722 gtatcagcagggtggtccacttgaacgtgtacagctccgagaactcctcgtcgtccccgg 781
|||| || ||| ||||| ||||| ||||||||||| || |||||||| || || ||||
Sbjct: 170 ccatcaacaaggttgtccatttgaatgtgtacagctcagaaaactcctcatcatctccgg 111
Query: 782 ccttcgacgtcacggtgaagctcgtgtc 809
|||| | || ||||||||||| |||||
Sbjct: 110 cctttgttgtgacggtgaagctagtgtc 83
>gb|BG300950.1|BG300950 HVSMEb0019A22f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0019A22f, mRNA sequence
Length = 619
Score = 297 bits (150), Expect = 1e-078
Identities = 267/306 (87%)
Strand = Plus / Minus
Query: 422 tgcagtccaggccacactcctccaggagcgggccgttgctcttggcgaggaacgggtcga 481
|||||||||| || ||||||||||| || ||||||| | ||||||||||||| |||| |
Sbjct: 307 tgcagtccagaccgcactcctccagaagagggccgtcggtcttggcgaggaaagggttca 248
Query: 482 cgcggacccacaggagcgagaagatcgaggccagcaggatggaccagacgatgacgatcg 541
| || |||||||||||||||| |||||| |||| |||||||||||||||||| |||||||
Sbjct: 247 cacgcacccacaggagcgagatgatcgaagccaacaggatggaccagacgatcacgatcg 188
Query: 542 tcggcgtcctgttctgcctccccaccagacccttgaggaacgggtacaggtggacgatca 601
|||| |||||||||||||| |||| |||||||||||||||||||||||| || || ||||
Sbjct: 187 tcggggtcctgttctgccttcccaacagacccttgaggaacgggtacagatgaacaatca 128
Query: 602 cccagaaggcgaagaagagcttcccgaacagggggccccacgactcgtacccgttgttga 661
||||||| |||||||||||||||||||| || || ||||| || || || ||||||||||
Sbjct: 127 cccagaacgcgaagaagagcttcccgaagagaggcccccatgattcatatccgttgttga 68
Query: 662 tcgcgttcgagatcccggccaccaccccgatgaagttcagcaggaggagcgtggtcgggg 721
| ||||| ||||| || || ||||| ||||||||||||||||| || || ||||||||||
Sbjct: 67 ttgcgttggagatgccagcaaccacaccgatgaagttcagcagaagcagggtggtcgggg 8
Query: 722 gtatca 727
| ||||
Sbjct: 7 gaatca 2
>gb|AJ462437.1|AJ462437 AJ462437 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200081H04F1, mRNA sequence
Length = 360
Score = 291 bits (147), Expect = 9e-077
Identities = 279/323 (86%)
Strand = Plus / Minus
Query: 487 acccacaggagcgagaagatcgaggccagcaggatggaccagacgatgacgatcgtcggc 546
|||||||||||||||| |||||| |||| |||||||||||||||||| |||||||||||
Sbjct: 354 acccacaggagcgagatgatcgaagccaacaggatggaccagacgatcacgatcgtcggg 295
Query: 547 gtcctgttctgcctccccaccagacccttgaggaacgggtacaggtggacgatcacccag 606
|||||||||||||| |||| |||||||||||||||||||||||| || || |||||||||
Sbjct: 294 gtcctgttctgccttcccaacagacccttgaggaacgggtacagatgaacaatcacccag 235
Query: 607 aaggcgaagaagagcttcccgaacagggggccccacgactcgtacccgttgttgatcgcg 666
|| |||||||||||||||||||| || || ||||| || || || ||||||||||| |||
Sbjct: 234 aacgcgaagaagagcttcccgaagagaggcccccatgattcatatccgttgttgattgcg 175
Query: 667 ttcgagatcccggccaccaccccgatgaagttcagcaggaggagcgtggtcgggggtatc 726
|| ||||| || || ||||| ||||||||||||||||| || || ||||||||||| |||
Sbjct: 174 ttggagatgccagcaaccacaccgatgaagttcagcagaagcagggtggtcgggggaatc 115
Query: 727 agcagggtggtccacttgaacgtgtacagctccgagaactcctcgtcgtccccggccttc 786
| || ||| ||||| ||||| || |||||||| || |||||||| || || ||||||||
Sbjct: 114 aacaaggttgtccatttgaatgtatacagctcagaaaactcctcatcatctccggccttt 55
Query: 787 gacgtcacggtgaagctcgtgtc 809
| || ||||||||||| |||||
Sbjct: 54 gttgtgacggtgaagctagtgtc 32
>gb|AV927219.1|AV927219 AV927219 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd1a04 3', mRNA sequence
Length = 588
Score = 285 bits (144), Expect = 5e-075
Identities = 388/463 (83%), Gaps = 5/463 (1%)
Strand = Plus / Plus
Query: 451 gggccgttgctcttggcgagg-aacgggtcgacgcggacccacagg-agcgagaa-gatc 507
||||||| | ||||||||||| || |||| || || ||||||||| |||||| | ||||
Sbjct: 118 gggccgtcggtcttggcgaggnaaagggttcacacgcacccacaggnagcgagnatgatc 177
Query: 508 gaggccagcagg-atggaccag-acgatgacgatcgtcggcgtcctgttctgcctcccca 565
|| |||| |||| ||||||||| ||||| ||||||||||| |||||||||||||| ||||
Sbjct: 178 gaagccaacaggnatggaccagnacgatcacgatcgtcggggtcctgttctgccttccca 237
Query: 566 ccagacccttgaggaacgggtacaggtggacgatcacccagaaggcgaagaagagcttcc 625
|||||||||||||||||||||||| || || ||||||||||| ||||||||||||||||
Sbjct: 238 acagacccttgaggaacgggtacagatgaacaatcacccagaacgcgaagaagagcttcc 297
Query: 626 cgaacagggggccccacgactcgtacccgttgttgatcgcgttcgagatcccggccacca 685
|||| || || ||||| || || || ||||||||||| ||||| ||||| || || ||||
Sbjct: 298 cgaagagaggcccccatgattcatatccgttgttgattgcgttggagatgccagcaacca 357
Query: 686 ccccgatgaagttcagcaggaggagcgtggtcgggggtatcagcagggtggtccacttga 745
| ||||||||||||||||| || || ||||||||||| |||| || ||| ||||| ||||
Sbjct: 358 caccgatgaagttcagcagaagcagggtggtcgggggaatcaacaaggttgtccatttga 417
Query: 746 acgtgtacagctccgagaactcctcgtcgtccccggccttcgacgtcacggtgaagctcg 805
| ||||||||||| || |||||||| || || |||||||| | || ||||||||||| |
Sbjct: 418 atgtgtacagctcagaaaactcctcatcatctccggcctttgttgtgacggtgaagctag 477
Query: 806 tgtcgatgccggcgagcaccttcagcaggccctggaacaccgcgaacagatgcgccgaaa 865
|||| | || || | |||||| || || || |||||||| || || ||||| || || |
Sbjct: 478 tgtccacaccagctatcaccttgagaagtccttggaacacggcaaatagatgggcagaga 537
Query: 866 cgcctccgatgacccagaactgctcgttcctccaccagtcgtc 908
| ||||| |||||||||||||||||||| |||||||| |||||
Sbjct: 538 cacctccaatgacccagaactgctcgtttctccaccaatcgtc 580
>gb|CA024787.1|CA024787 HZ50E24r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ50E24
5-PRIME, mRNA sequence
Length = 365
Score = 285 bits (144), Expect = 5e-075
Identities = 300/352 (85%)
Strand = Plus / Minus
Query: 2267 cttttgcaaccaaggcattgatccttaccttgaattcctcgtattctctcttcatcgccc 2326
|||| |||||||| |||||||| | | |||||||||||| || ||||||||||| || |
Sbjct: 365 ctttagcaaccaaagcattgattcggatcttgaattcctcatactctctcttcattgctc 306
Query: 2327 tcctctccctaacaaatgaagcagcaaccttgtctttcaggtagtctatcttctgttgga 2386
|||| ||||||||||| | | |||||||||||||||||||||||||||||||| |
Sbjct: 305 tcctgtccctaacaaagtttggtaccaccttgtctttcaggtagtctatcttctgttgaa 246
Query: 2387 agtaccactcaggagcacgaggctcgatattaaactttttgctgaaaggaacccatttct 2446
|||||||||| |||||||||||||| ||| | |||| || | |||||||||||||||||
Sbjct: 245 agtaccactctggagcacgaggctcaatactgtacttcttacagaaaggaacccatttct 186
Query: 2447 ttgcaaattcagatgtttcagacaatgcttcaaacgtaagcattgcagcaccatcatcag 2506
|||||||||| ||||||||||||||| |||| || || ||||| ||||||||||||||||
Sbjct: 185 ttgcaaattccgatgtttcagacaatccttcgaatgtcagcatggcagcaccatcatcag 126
Query: 2507 aaacatagcaggagaccttctcaaccggataatccacagaaaggatggaaaggacagtgt 2566
|||||||||| |||| ||| |||||||||||||| |||| ||||| || |||| |||||
Sbjct: 125 aaacatagcaagagagcttgtcaaccggataatctacagccaggatagataggatagtgt 66
Query: 2567 tcgctgtgaccaagggaggttcctttgtgggatcaaccgtactgacaaagaa 2618
| |||||||| | ||||| ||||| | |||||| || ||||||||||||||
Sbjct: 65 ttgctgtgactagcggaggctccttagcgggatcgactgtactgacaaagaa 14
>gb|BF628750.2|BF628750 HVSMEb0007M11f Hordeum vulgare seedling shoot EST library HVcDNA0002
(Dehydration stress) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEb0007M11f, mRNA sequence
Length = 693
Score = 281 bits (142), Expect = 9e-074
Identities = 235/266 (88%)
Strand = Plus / Minus
Query: 1693 caccacttgggccagcagttgcaagttcttgatggtggcttctttgttttaggagcatca 1752
|||||||| ||||||||||| ||||| ||||| ||||||||||||||||| |||||||||
Sbjct: 306 caccactttggccagcagttacaagtccttgacggtggcttctttgttttgggagcatca 247
Query: 1753 taaccatatagtgcctgccgtctgaaaacacatccagtacccacataaatgggcccttga 1812
||||| || |||||||||| |||||| |||||||||||||| ||||| ||||| ||||||
Sbjct: 246 taaccgtacagtgcctgccttctgaagacacatccagtaccaacatagatggggccttga 187
Query: 1813 ataccatccaaacctttcatgttgatatcaaaaaagacaacgttcctgttagcatatcga 1872
|||||||||||||||||||||||||||||||| ||||| |||||| |||| |||||||||
Sbjct: 186 ataccatccaaacctttcatgttgatatcaaagaagacgacgttcttgttggcatatcga 127
Query: 1873 tcatgacggtcaataccaccaaacctctgagggaactgtacatagcacactttcttcccc 1932
|| ||||||||||| | || || ||||||||||| ||||| || || ||||| ||
Sbjct: 126 tcgtgacggtcaatggagtcgaatctttgagggaactgcacataacaaaccttctttccg 67
Query: 1933 accaaaggatccatcatgaaacacat 1958
||||||||||||||||||||||||||
Sbjct: 66 accaaaggatccatcatgaaacacat 41
Score = 200 bits (101), Expect = 3e-049
Identities = 218/257 (84%)
Strand = Plus / Minus
Query: 1317 gatatcctctgtgatcgatccataaatccagccaatctcttttccccagtcggtcttgtc 1376
|||||||||||| | || ||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 685 gatatcctctgtaactgacccatagatccagccaatctcttttccccagtctgtcttgtc 626
Query: 1377 ttcgtagccgcagctgataacatgtatagcttccttcagaagagaagctggacttgcgct 1436
||| ||||| || | ||| ||||| ||||||||||||||||||||||| ||||| | |
Sbjct: 625 ttcatagccacaaccgatgacatggatagcttccttcagaagagaagcaggactatcaca 566
Query: 1437 cttcagggtccctccgttctcaagaagtgttgatgcgacaaaaacagaagactgcccaaa 1496
| ||||||| || || |||||||||||||| ||||| |||||||| | |||||| |||||
Sbjct: 565 cctcagggttccaccattctcaagaagtgtggatgcaacaaaaacggcagactggccaaa 506
Query: 1497 tttcttctctagtttctgttgatttacaattccggccttctcgatatcagcacctggagc 1556
|||||||||||| |||||||| |||||||| || ||||||| | ||||| |||| ||
Sbjct: 505 tttcttctctagcttctgttggtttacaataccagccttctgagtttcagctcctgcggc 446
Query: 1557 accttcatcaatttcac 1573
|||||||||||||||
Sbjct: 445 ggcttcatcaatttcac 429
>gb|AV836573.1|AV836573 AV836573 K. Sato unpublished cDNA library: Hordeum vulgare subsp.
vulgare seedling leaves second leaf stage Hordeum vulgare
subsp. vulgare cDNA clone basd25p02, mRNA sequence
Length = 349
Score = 276 bits (139), Expect = 5e-072
Identities = 279/326 (85%)
Strand = Plus / Minus
Query: 1105 gaaaacctttccaggaattttagcccgccgccgtacccgtaccaaagtgggcagtgcttg 1164
||||| ||||||| ||||| || || || || ||||| |||||||| ||||| || |||
Sbjct: 348 gaaaatctttccaaaaatttcagtccaccaccatacccataccaaagagggcaatggttg 289
Query: 1165 ctgaagaaaatttcgacagacccaagggcccagcgaaggacctggtgaagacggtcggaa 1224
|||||||| || || | ||||||||| ||||| ||||| ||||||| |||||| || |||
Sbjct: 288 ctgaagaagatctcaatagacccaagagcccaccgaagaacctggttaagacgatctgaa 229
Query: 1225 aggttcagaggcgcagaacctttgaatgcaggccgcttcgggatgcagtaaatagaccgc 1284
|| || |||||||||||||| |||||||||||||| || || ||||||||||| || |||
Sbjct: 228 agattgagaggcgcagaacccttgaatgcaggccgtttaggaatgcagtaaattgatcgc 169
Query: 1285 cagccatggcagtgcatcttaaatccagtcaagatatcctctgtgatcgatccataaatc 1344
||||||||||| ||||||||||| ||||| | |||||||||||| | || ||||| |||
Sbjct: 168 cagccatggcaatgcatcttaaacccagttaggatatcctctgtaactgacccatagatc 109
Query: 1345 cagccaatctcttttccccagtcggtcttgtcttcgtagccgcagctgataacatgtata 1404
||||||||||||||||||||||| ||||||||||| ||||| || | ||| ||||| |||
Sbjct: 108 cagccaatctcttttccccagtctgtcttgtcttcatagccacanccgatgacatggata 49
Query: 1405 gcttccttcagaagagaagctggact 1430
|||||||||||||||||||| |||||
Sbjct: 48 gcttccttcagaagagaagcaggact 23
>gb|BQ765797.1|BQ765797 EBro03_SQ008_O01_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ008_O01 5', mRNA sequence
Length = 401
Score = 276 bits (139), Expect = 5e-072
Identities = 304/359 (84%)
Strand = Plus / Minus
Query: 955 atgcagatgaaaagtgccatgaaccagatactggccacattggtaagctctggtgtgata 1014
|||||||||||||||| |||| ||||||||||||| | ||| |||||||||| |||||
Sbjct: 361 atgcagatgaaaagtgacatgtaccagatactggcaaggttgctaagctctggagtgatg 302
Query: 1015 aacttccccgtgagcaggcagatggcaggcaaggtacagtaagccaggagaggaatggac 1074
||||| ||||| | || |||||| || ||||| |||||||||||||| || ||||||||
Sbjct: 301 aacttgcccgttaacaagcagatagcgggcaacgtacagtaagccagaagtggaatggag 242
Query: 1075 gtccagggataaacgatggagttgatataagaaaacctttccaggaattttagcccgccg 1134
||||| ||||| || ||||||||||| || ||||| ||||||| ||||| || || ||
Sbjct: 241 gtccaaggatagacaatggagttgatgtaggaaaatctttccaaaaatttcagtccacca 182
Query: 1135 ccgtacccgtaccaaagtgggcagtgcttgctgaagaaaatttcgacagacccaagggcc 1194
|| ||||| |||||||| ||||| || ||||||||||| || || | ||||||||| |||
Sbjct: 181 ccatacccataccaaagagggcaatggttgctgaagaagatctcaatagacccaagagcc 122
Query: 1195 cagcgaaggacctggtgaagacggtcggaaaggttcagaggcgcagaacctttgaatgca 1254
|| ||||| ||||||| |||||| || ||||| || |||||||||||||| |||||||||
Sbjct: 121 caccgaagaacctggttaagacgatctgaaagattgagaggcgcagaacccttgaatgca 62
Query: 1255 ggccgcttcgggatgcagtaaatagaccgccagccatggcagtgcatcttaaatccagt 1313
||||| || || ||||||||||| || |||||||||||||| ||||||||||| |||||
Sbjct: 61 ggccgtttaggaatgcagtaaattgatcgccagccatggcaatgcatcttaaacccagt 3
>gb|AV836609.1|AV836609 AV836609 K. Sato unpublished cDNA library: Hordeum vulgare subsp.
vulgare seedling leaves second leaf stage Hordeum vulgare
subsp. vulgare cDNA clone basd18j24, mRNA sequence
Length = 548
Score = 272 bits (137), Expect = 8e-071
Identities = 341/409 (83%)
Strand = Plus / Minus
Query: 2548 aggatggaaaggacagtgttcgctgtgaccaagggaggttcctttgtgggatcaaccgta 2607
||||| || |||| |||||| |||||||| | ||||| ||||| | |||||| || |||
Sbjct: 537 aggatagataggatagtgtttgctgtgactagcggaggctccttagcgggatcgactgta 478
Query: 2608 ctgacaaagaagtcgattggagcaagctgagagggttgaccttccttgtcaaaccttagt 2667
||||||||||| || | ||| || || ||||| || || ||||||||||| ||||| | |
Sbjct: 477 ctgacaaagaaatcaactggggcgagttgagatggctggccttccttgtcgaacctcaat 418
Query: 2668 gacaaacggtccaggtaagtctctctctcgattggaagccactttgggaactgatcaaga 2727
| ||| ||||| ||||||||||| ||||| || |||| |||||| ||||| ||||| |||
Sbjct: 417 gtcaaccggtcaaggtaagtctccctctcaataggaaaccacttggggaattgatcgaga 358
Query: 2728 atccaggacatcgcaaaccagatttcacagattacagatatgagccacaatgcaaatgca 2787
||||| ||||| |||||||| || || || || ||||||||||||||||| ||||||||
Sbjct: 357 atccaagacatggcaaaccatatctcgcatatgacagatatgagccacaaaacaaatgca 298
Query: 2788 tctttcgccggatgcatcactcggtagtggaagaagaaacccaaaaccaccaaccggata 2847
|| | | |||||||||| || |||||||||||||||| || || || |||||| |||||
Sbjct: 297 tcatgcaccggatgcatgacacggtagtggaagaagagacacacaatcaccaaacggatc 238
Query: 2848 acgataatcatcctgtagggattaattcggcttgatgatatagggacttttctggacaat 2907
|| || ||||||||||| |||||||| ||||||| | || || || |||||||||| |
Sbjct: 237 acaatgatcatcctgtaaggattaatcaggcttgaaggaatgggaacctttctggacagt 178
Query: 2908 ggctgcctagcttcatccattagtggcagatctgcatcgtcgccatccc 2956
||||| |||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 177 ggctgtctagcttcatccattagtggtagatctgcatcgtcgccatccc 129
Score = 83.8 bits (42), Expect = 4e-014
Identities = 57/62 (91%)
Strand = Plus / Minus
Query: 2994 ctcctgcttctgcttccagccctccattctctccttccaggccacgctgccatatccgta 3053
|||||||||||||||||||| |||||| |||||||||||||| ||||| ||||| |||||
Sbjct: 85 ctcctgcttctgcttccagctctccatcctctccttccaggcgacgctcccatacccgta 26
Query: 3054 gg 3055
||
Sbjct: 25 gg 24
>gb|BJ463805.1|BJ463805 BJ463805 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags30j03 5', mRNA sequence
Length = 364
Score = 258 bits (130), Expect = 1e-066
Identities = 178/194 (91%)
Strand = Plus / Minus
Query: 1693 caccacttgggccagcagttgcaagttcttgatggtggcttctttgttttaggagcatca 1752
|||||||| ||||||||||||||||| ||||| ||||||||||||||||| |||||||||
Sbjct: 229 caccactttggccagcagttgcaagtccttgacggtggcttctttgttttgggagcatca 170
Query: 1753 taaccatatagtgcctgccgtctgaaaacacatccagtacccacataaatgggcccttga 1812
||||| || |||||||||| |||||| |||||||||||||| ||||| ||||| ||||||
Sbjct: 169 taaccgtacagtgcctgccttctgaagacacatccagtaccaacatagatggggccttga 110
Query: 1813 ataccatccaaacctttcatgttgatatcaaaaaagacaacgttcctgttagcatatcga 1872
|||||||||||||||||||||||||||||||| ||||| |||||| |||| |||||||||
Sbjct: 109 ataccatccaaacctttcatgttgatatcaaagaagacgacgttcttgttggcatatcga 50
Query: 1873 tcatgacggtcaat 1886
|| |||||||||||
Sbjct: 49 tcgtgacggtcaat 36
>gb|BI960696.1|BI960696 HVSMEn0025O11f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0025O11f, mRNA sequence
Length = 658
Score = 244 bits (123), Expect = 2e-062
Identities = 349/423 (82%), Gaps = 6/423 (1%)
Strand = Plus / Plus
Query: 486 gacccacaggagcgagaagatcgaggccagcaggatggaccagacgatgacgatcgtcgg 545
|||||| || || ||||| || ||||| ||||| | |||||| | |||||| || || ||
Sbjct: 232 gacccaaagcagggagaacatggaggctagcagcacggaccatatgatgacaatggtggg 291
Query: 546 cgtcctgttctgcctccccaccagacccttgaggaacgggtacaggtggacgatcaccca 605
|||||||||||||||||||| | |||||||||||||||||| || || |||||||||||
Sbjct: 292 cgtcctgttctgcctccccatgaaacccttgaggaacgggtagagatgcacgatcaccca 351
Query: 606 gaaggcgaagaagagcttcccgaacagggggccccacgactcgtacccgttgttgatcgc 665
|||||||||||||||||| ||||| || || |||||||||| ||||||||||||||| ||
Sbjct: 352 gaaggcgaagaagagcttaccgaatagcggcccccacgactggtacccgttgttgatggc 411
Query: 666 gttcgagatcccggccaccaccccgatgaagttcagcaggaggagcgtggtcgggggtat 725
|| || || || |||||||| ||||||| ||| | || || ||||| ||| | || ||
Sbjct: 412 gtcagaaatgcccgccaccacgccgatgatgttgatcaccagcagcgtcgtctgagggat 471
Query: 726 cagcagggtggtccacttgaacgtgtacagctccgagaactcctcg---tcgtcccc--- 779
|| ||||||||||||||||| | ||| ||||||| |||||| ||| |||| |||
Sbjct: 472 gaggagggtggtccacttgaaggcgtaaagctccgcgaactcgtcgtcctcgtaccccgt 531
Query: 780 ggccttcgacgtcacggtgaagctcgtgtcgatgccggcgagcaccttcagcaggccctg 839
|||||| || || |||||||| | |||||||| ||||| || ||||| |||||||||||
Sbjct: 532 ggccttggaggtgacggtgaatttggtgtcgatcccggccaggaccttgagcaggccctg 591
Query: 840 gaacaccgcgaacagatgcgccgaaacgcctccgatgacccagaactgctcgttcctcca 899
|| || |||||||| |||||| | ||||| ||||||||||| |||||||||||||| ||
Sbjct: 592 gatgacggcgaacaggtgcgcccacacgccgccgatgacccataactgctcgttcctaca 651
Query: 900 cca 902
|||
Sbjct: 652 cca 654
>gb|AV923841.1|AV923841 AV923841 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd1m06 5', mRNA sequence
Length = 522
Score = 238 bits (120), Expect = 1e-060
Identities = 186/208 (89%)
Strand = Plus / Minus
Query: 422 tgcagtccaggccacactcctccaggagcgggccgttgctcttggcgaggaacgggtcga 481
|||||||||| || ||||||||||| || ||||||| | ||||||||||||| |||| |
Sbjct: 210 tgcagtccagaccgcactcctccagaagagggccgtcggtcttggcgaggaaagggttca 151
Query: 482 cgcggacccacaggagcgagaagatcgaggccagcaggatggaccagacgatgacgatcg 541
| || |||||||||||||||| |||||| |||| |||||||||||||||||| |||||||
Sbjct: 150 cacgcacccacaggagcgagatgatcgaagccaacaggatggaccagacgatcacgatcg 91
Query: 542 tcggcgtcctgttctgcctccccaccagacccttgaggaacgggtacaggtggacgatca 601
|||| |||||||||||||| |||| |||||||||||||||||||||||| || || ||||
Sbjct: 90 tcggggtcctgttctgccttcccaacagacccttgaggaacgggtacagatgaacaatca 31
Query: 602 cccagaaggcgaagaagagcttcccgaa 629
||||||| ||||||||||||||||||||
Sbjct: 30 cccagaacgcgaagaagagcttcccgaa 3
>gb|CA020497.1|CA020497 HZ36H21r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ36H21
5-PRIME, mRNA sequence
Length = 556
Score = 238 bits (120), Expect = 1e-060
Identities = 262/308 (85%), Gaps = 1/308 (0%)
Strand = Plus / Minus
Query: 1267 atgcagtaaatagaccgccagccatggcagtgcatcttaaatccagtcaagatatcctct 1326
||||||||||| || |||||||||||||| ||||||||||| ||||| | ||||||||||
Sbjct: 546 atgcagtaaattgatcgccagccatggcaatgcatcttaaacccagttaggatatcctct 487
Query: 1327 gtgatcgatcc-ataaatccagccaatctcttttccccagtcggtcttgtcttcgtagcc 1385
|| | || || ||| |||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 486 gtaactgaccccatagatccagccaatctcttttccccagtctgtcttgtcttcatagcc 427
Query: 1386 gcagctgataacatgtatagcttccttcagaagagaagctggacttgcgctcttcagggt 1445
|| | ||| ||||| ||||||||||||||||||||||| ||||| | | | |||||||
Sbjct: 426 acaaccgatgacatggatagcttccttcagaagagaagcaggactatcacacctcagggt 367
Query: 1446 ccctccgttctcaagaagtgttgatgcgacaaaaacagaagactgcccaaatttcttctc 1505
|| || |||||||||||||| ||||| |||||||| | |||||| ||||||||||||||
Sbjct: 366 tccaccattctcaagaagtgtggatgcaacaaaaacggcagactggccaaatttcttctc 307
Query: 1506 tagtttctgttgatttacaattccggccttctcgatatcagcacctggagcaccttcatc 1565
||| |||||||| |||||||| || ||||||| | ||||| |||| || |||||||
Sbjct: 306 tagcttctgttggtttacaataccagccttctgagtttcagctcctgcggcggcttcatc 247
Query: 1566 aatttcac 1573
||||||||
Sbjct: 246 aatttcac 239
Score = 145 bits (73), Expect = 1e-032
Identities = 103/113 (91%)
Strand = Plus / Minus
Query: 1693 caccacttgggccagcagttgcaagttcttgatggtggcttctttgttttaggagcatca 1752
|||||||| ||||||||||||||||| ||||| ||||||||||||||||| |||||||||
Sbjct: 116 caccactttggccagcagttgcaagtccttgacggtggcttctttgttttgggagcatca 57
Query: 1753 taaccatatagtgcctgccgtctgaaaacacatccagtacccacataaatggg 1805
||||| || |||||||||| |||||| |||||||||||||| ||||| |||||
Sbjct: 56 taaccgtacagtgcctgccttctgaagacacatccagtaccaacatagatggg 4
>gb|CA031702.1|CA031702 HX10O05r HX Hordeum vulgare subsp. vulgare cDNA clone HX10O05
5-PRIME, mRNA sequence
Length = 295
Score = 230 bits (116), Expect = 3e-058
Identities = 252/296 (85%), Gaps = 1/296 (0%)
Strand = Plus / Minus
Query: 1784 atccagtacccacataaatgggcccttgaataccatccaaacctttcatgttgatatcaa 1843
|||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 295 atccagtaccaacatagatggggccttgaataccatccaaacctttcatgttgatatcaa 236
Query: 1844 aaaagacaacgttcctgttagcatatcgatcatgacggtcaataccaccaaacctctgag 1903
| ||||| |||||| |||| ||||||||||||||||||||||| | || || ||||
Sbjct: 235 agaagacgacgttcttgttggcatatcgatcatgacggtcaatggagtcgaatctttgag 176
Query: 1904 ggaactgtacatagcacactttcttccccaccaaaggatccatcatgaaacacatagcct 1963
||||||| ||||| || || ||||| || |||||||||||||||||||||||||| || |
Sbjct: 175 ggaactgcacataacaaaccttctttccgaccaaaggatccatcatgaaacacattgctt 116
Query: 1964 cttttatggccttgctattgttgatgtagtgatcacagtccaagttcaataggtatgcag 2023
| || | |||||||| ||||| | ||||||||||| |||||||||| | ||||| ||
Sbjct: 115 ccttgactgccttgctgttgttcacatagtgatcacaatccaagttcagcatgtatg-ag 57
Query: 2024 catttgataagacagcagagacacggaccagtgcattcatggcaccagccttcttg 2079
|||| | || ||||||||||| ||||||| ||| ||||| |||||||||||||||
Sbjct: 56 cattagttagtacagcagagacccggaccaatgcgttcatagcaccagccttcttg 1
>gb|BJ447591.1|BJ447591 BJ447591 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak16h09 5', mRNA sequence
Length = 633
Score = 222 bits (112), Expect = 7e-056
Identities = 178/200 (89%)
Strand = Plus / Minus
Query: 422 tgcagtccaggccacactcctccaggagcgggccgttgctcttggcgaggaacgggtcga 481
|||||||||| || ||||||||||| || ||||||| | ||||||||||||| |||| |
Sbjct: 201 tgcagtccagaccgcactcctccagaagagggccgtcggtcttggcgaggaaagggttca 142
Query: 482 cgcggacccacaggagcgagaagatcgaggccagcaggatggaccagacgatgacgatcg 541
| || |||||||||||||||| |||||| |||| |||||||||||||||||| |||||||
Sbjct: 141 cacgcacccacaggagcgagatgatcgaagccaacaggatggaccagacgatcacgatcg 82
Query: 542 tcggcgtcctgttctgcctccccaccagacccttgaggaacgggtacaggtggacgatca 601
|||| |||||||||||||| |||| |||||||||||||||||||||||| || || ||||
Sbjct: 81 tcggggtcctgttctgccttcccaacagacccttgaggaacgggtacagatgaacaatca 22
Query: 602 cccagaaggcgaagaagagc 621
||||||| ||||||||||||
Sbjct: 21 cccagaacgcgaagaagagc 2
>gb|BI957138.1|BI957138 HVSMEn0007L07f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0007L07f,
mRNA sequence
Length = 618
Score = 192 bits (97), Expect = 6e-047
Identities = 248/297 (83%), Gaps = 1/297 (0%)
Strand = Plus / Minus
Query: 1231 agaggcgcagaacctttgaatgcaggccgcttcgggatgcagtaaatagaccg-ccagcc 1289
||||| ||||||||||| |||||||||||||| | |||||| ||| || | |||||
Sbjct: 530 agaggggcagaacctttaaatgcaggccgcttagcaatgcaggtaattgaatggccagct 471
Query: 1290 atggcagtgcatcttaaatccagtcaagatatcctctgtgatcgatccataaatccagcc 1349
|||||| |||||||||| ||||| | |||||||||||| || || ||||| ||||||||
Sbjct: 470 atggcaaggcatcttaaacccagttaggatatcctctgtaattgagccatagatccagcc 411
Query: 1350 aatctcttttccccagtcggtcttgtcttcgtagccgcagctgataacatgtatagcttc 1409
|||||||||||| ||||| || |||||||| ||||| || | ||| ||||| ||||||||
Sbjct: 410 aatctcttttccgcagtctgtgttgtcttcatagccacaaccgatgacatggatagcttc 351
Query: 1410 cttcagaagagaagctggacttgcgctcttcagggtccctccgttctcaagaagtgttga 1469
|||||||||||||| ||||| | | | ||||||| || || |||||||||||||| ||
Sbjct: 350 gttcagaagagaagcaggactatcacacgtcagggttccaccattctcaagaagtgtgga 291
Query: 1470 tgcgacaaaaacagaagactgcccaaatttcttctctagtttctgttgatttacaat 1526
||| |||||||| | |||||| || |||||||||||||| || ||||| ||||||||
Sbjct: 290 tgcaacaaaaacggcagactggccgaatttcttctctagcttgtgttggtttacaat 234
>gb|BG366351.1|BG366351 HVSMEi0006M09f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0006M09f, mRNA sequence
Length = 557
Score = 174 bits (88), Expect = 1e-041
Identities = 157/180 (87%)
Strand = Plus / Minus
Query: 3357 gaactcgccctccaggtcgtcgacgccgtcctcctcctcgtcgccggccacccgcgggca 3416
||||||| |||| ||||||||| |||||||||||||||| || |||| ||| |||| |||
Sbjct: 279 gaactcgtcctcgaggtcgtcggcgccgtcctcctcctcatccccgggcacgcgcgcgca 220
Query: 3417 gcccttgaggcgcttgtagcgggtcctgcactgcgggcacgcttgcgagccctcgcggcg 3476
||||||||||||||||| | |||| ||||||| ||||| || | ||||||||| ||
Sbjct: 219 ccccttgaggcgcttgtatctggtcttgcactgtgggcagttctgggtgccctcgcgtcg 160
Query: 3477 ctcgtactcgtagcaggcgcggcagacggggaaggcgcactcgttgcacgccacgaaggg 3536
|||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 159 ctcgtactcgtagcagtcgcggcagacggggaaggcgcactcgttgcaggcgacgaaggg 100
Score = 48.1 bits (24), Expect = 0.002
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 3115 aaagggagcgggtggatcctcttgcccccgccgccg 3150
|||||||||||||||||||| || ||||||| ||||
Sbjct: 509 aaagggagcgggtggatcctttttcccccgcagccg 474
>gb|BQ469880.1|BQ469880 HX01C05T HX Hordeum vulgare subsp. vulgare cDNA clone HX01C05
5-PRIME, mRNA sequence
Length = 642
Score = 174 bits (88), Expect = 1e-041
Identities = 157/180 (87%)
Strand = Plus / Minus
Query: 3357 gaactcgccctccaggtcgtcgacgccgtcctcctcctcgtcgccggccacccgcgggca 3416
||||||| |||| ||||||||| |||||||||||||||| || |||| ||| |||| |||
Sbjct: 201 gaactcgtcctcgaggtcgtcggcgccgtcctcctcctcatccccgggcacgcgcgcgca 142
Query: 3417 gcccttgaggcgcttgtagcgggtcctgcactgcgggcacgcttgcgagccctcgcggcg 3476
||||||||||||||||| | |||| ||||||| ||||| || | ||||||||| ||
Sbjct: 141 ccccttgaggcgcttgtatctggtcttgcactgtgggcagttctgggtgccctcgcgtcg 82
Query: 3477 ctcgtactcgtagcaggcgcggcagacggggaaggcgcactcgttgcacgccacgaaggg 3536
|||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 81 ctcgtactcgtagcagtcgcggcagacggggaaggcgcactcgttgcaggcgacgaaggg 22
Score = 161 bits (81), Expect = 2e-037
Identities = 138/157 (87%)
Strand = Plus / Minus
Query: 2994 ctcctgcttctgcttccagccctccattctctccttccaggccacgctgccatatccgta 3053
|||||||||||||||||||| |||||| ||||| |||||||| ||||| ||||| |||||
Sbjct: 552 ctcctgcttctgcttccagctctccatcctctctttccaggcgacgctcccatacccgta 493
Query: 3054 ggcggccagatccttggacgggtccatggatctcggttgcactggaaggttgggatctgc 3113
|| | | ||||||||| |||||||||||||| |||||||| |||||||||| ||| ||
Sbjct: 492 ggaaccaatatccttggatgggtccatggatcttggttgcacaggaaggttggaatcagc 433
Query: 3114 gaaagggagcgggtggatcctcttgcccccgccgccg 3150
|||||||||||||||||||||| ||||||||||||
Sbjct: 432 ataagggagcgggtggatcctctttcccccgccgccg 396
Score = 79.8 bits (40), Expect = 6e-013
Identities = 55/60 (91%)
Strand = Plus / Minus
Query: 3181 tgctgctccggcgggatgtcatcaaccatctggccgttggtgaggagcggcacgttgggg 3240
||||||||||||||||||||||| ||||||||||| ||||||||||| || || ||||||
Sbjct: 374 tgctgctccggcgggatgtcatcgaccatctggccattggtgaggagggggacattgggg 315
Score = 73.8 bits (37), Expect = 4e-011
Identities = 40/41 (97%)
Strand = Plus / Minus
Query: 2914 ctagcttcatccattagtggcagatctgcatcgtcgccatc 2954
|||||||||||||||||||| ||||||||||||||||||||
Sbjct: 638 ctagcttcatccattagtggtagatctgcatcgtcgccatc 598
Score = 61.9 bits (31), Expect = 1e-007
Identities = 55/63 (87%)
Strand = Plus / Minus
Query: 3268 ccgccgcggccgtagctcatctgcgccctgagcatggactcggcgacgtactgcgggtcg 3327
||||||||||||||| |||| || || |||||||||||||||| ||||||||| ||||
Sbjct: 278 ccgccgcggccgtaggtcatgtgggcatggagcatggactcggcggcgtactgcgagtcg 219
Query: 3328 tcc 3330
|||
Sbjct: 218 tcc 216
>gb|AV910504.1|AV910504 AV910504 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak4m03 5', mRNA sequence
Length = 239
Score = 165 bits (83), Expect = 1e-038
Identities = 137/155 (88%)
Strand = Plus / Minus
Query: 422 tgcagtccaggccacactcctccaggagcgggccgttgctcttggcgaggaacgggtcga 481
|||||||||| || ||||||||||| || ||||||| | ||||||||||||| |||| |
Sbjct: 156 tgcagtccagaccgcactcctccagaagagggccgtcggtcttggcgaggaaagggttca 97
Query: 482 cgcggacccacaggagcgagaagatcgaggccagcaggatggaccagacgatgacgatcg 541
| || |||||||||||||||| |||||| |||| |||||||||||||||||| |||||||
Sbjct: 96 cacgcacccacaggagcgagatgatcgaagccaacaggatggaccagacgatcacgatcg 37
Query: 542 tcggcgtcctgttctgcctccccaccagacccttg 576
|||| |||||||||||||| |||| ||||||||||
Sbjct: 36 tcggggtcctgttctgccttcccaacagacccttg 2
>gb|AV923333.1|AV923333 AV923333 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd12l12 5', mRNA sequence
Length = 656
Score = 151 bits (76), Expect = 2e-034
Identities = 151/176 (85%)
Strand = Plus / Minus
Query: 486 gacccacaggagcgagaagatcgaggccagcaggatggaccagacgatgacgatcgtcgg 545
|||||||| || |||||||| ||||| ||||||| ||||||| | ||||| || ||
Sbjct: 652 gacccacacaagggagaagatggaggcgagcaggacagaccagagcacaacgatggtggg 593
Query: 546 cgtcctgttctgcctccccaccagacccttgaggaacgggtacaggtggacgatcaccca 605
||||| |||||||||||||| || ||||||||||||||||| ||||||||||| |||||
Sbjct: 592 cgtccggttctgcctccccatgagccccttgaggaacgggtagaggtggacgatgaccca 533
Query: 606 gaaggcgaagaagagcttcccgaacagggggccccacgactcgtacccgttgttga 661
||||| |||||||||||||||||| || |||||||| ||| ||||||| |||||||
Sbjct: 532 gaaggagaagaagagcttcccgaagagcgggccccaggacccgtacccattgttga 477
Score = 85.7 bits (43), Expect = 1e-014
Identities = 70/79 (88%)
Strand = Plus / Minus
Query: 834 gccctggaacaccgcgaacagatgcgccgaaacgcctccgatgacccagaactgctcgtt 893
||||||||| || |||||||||||||| || ||||| || ||||||||||||||||||||
Sbjct: 298 gccctggaagacggcgaacagatgcgcggacacgccacctatgacccagaactgctcgtt 239
Query: 894 cctccaccagtcgtcgatg 912
| ||||||||| ||||||
Sbjct: 238 acgccaccagtcctcgatg 220
Score = 46.1 bits (23), Expect = 0.009
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 708 gagcgtggtcgggggtatcagcagggtggtccacttgaa 746
||||||||| || || ||||||||||| |||||||||||
Sbjct: 430 gagcgtggtgggcgggatcagcagggttgtccacttgaa 392
>gb|AV927371.1|AV927371 AV927371 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd1m06 3', mRNA sequence
Length = 683
Score = 151 bits (76), Expect = 2e-034
Identities = 127/144 (88%)
Strand = Plus / Plus
Query: 422 tgcagtccaggccacactcctccaggagcgggccgttgctcttggcgaggaacgggtcga 481
|||||||||| || ||||||||||| || ||||||| | ||||||||||||| |||| |
Sbjct: 540 tgcagtccagaccgcactcctccagaagagggccgtcggtcttggcgaggaaagggttca 599
Query: 482 cgcggacccacaggagcgagaagatcgaggccagcaggatggaccagacgatgacgatcg 541
| || |||||||||||||||| |||||| |||| |||||||||||||||||| |||||||
Sbjct: 600 cacgcacccacaggagcgagatgatcgaagccaacaggatggaccagacgatcacgatcg 659
Query: 542 tcggcgtcctgttctgcctcccca 565
|||| |||||||||||||| ||||
Sbjct: 660 tcggggtcctgttctgccttccca 683
>gb|AV928513.1|AV928513 AV928513 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basdl12 3', mRNA sequence
Length = 661
Score = 151 bits (76), Expect = 2e-034
Identities = 151/176 (85%)
Strand = Plus / Plus
Query: 486 gacccacaggagcgagaagatcgaggccagcaggatggaccagacgatgacgatcgtcgg 545
|||||||| || |||||||| ||||| ||||||| ||||||| | ||||| || ||
Sbjct: 233 gacccacacaagggagaagatggaggcgagcaggacagaccagagcacaacgatggtggg 292
Query: 546 cgtcctgttctgcctccccaccagacccttgaggaacgggtacaggtggacgatcaccca 605
||||| |||||||||||||| || ||||||||||||||||| ||||||||||| |||||
Sbjct: 293 cgtccggttctgcctccccatgagccccttgaggaacgggtagaggtggacgatgaccca 352
Query: 606 gaaggcgaagaagagcttcccgaacagggggccccacgactcgtacccgttgttga 661
||||| |||||||||||||||||| || |||||||| ||| ||||||| |||||||
Sbjct: 353 gaaggagaagaagagcttcccgaagagcgggccccaggacccgtacccattgttga 408
Score = 79.8 bits (40), Expect = 6e-013
Identities = 64/72 (88%)
Strand = Plus / Plus
Query: 834 gccctggaacaccgcgaacagatgcgccgaaacgcctccgatgacccagaactgctcgtt 893
||||||||| || |||||||||||||| || ||||| || ||||||||||||||||||||
Sbjct: 587 gccctggaagacggcgaacagatgcgcggacacgccacctatgacccagaactgctcgtt 646
Query: 894 cctccaccagtc 905
| |||||||||
Sbjct: 647 acgccaccagtc 658
Score = 46.1 bits (23), Expect = 0.009
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 708 gagcgtggtcgggggtatcagcagggtggtccacttgaa 746
||||||||| || || ||||||||||| |||||||||||
Sbjct: 455 gagcgtggtgggcgggatcagcagggttgtccacttgaa 493
>gb|BF259601.3|BF259601 HVSMEf0019M06f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0019M06f, mRNA sequence
Length = 526
Score = 149 bits (75), Expect = 8e-034
Identities = 156/183 (85%)
Strand = Plus / Minus
Query: 422 tgcagtccaggccacactcctccaggagcgggccgttgctcttggcgaggaacgggtcga 481
|||||||||| || |||||||||| || || |||| | ||||||||||||| |||| |
Sbjct: 184 tgcagtccagaccgcactcctccataagaggcccgtcggtcttggcgaggaaagggttca 125
Query: 482 cgcggacccacaggagcgagaagatcgaggccagcaggatggaccagacgatgacgatcg 541
| || |||||||||||||||| |||||| ||| ||||||||||||||||| |||||||
Sbjct: 124 cacgcacccacaggagcgagatgatcgaagcccctaggatggaccagacgatcacgatcg 65
Query: 542 tcggcgtcctgttctgcctccccaccagacccttgaggaacgggtacaggtggacgatca 601
|||| |||||||||||||| |||| ||||||| |||||||||||| ||| || || ||||
Sbjct: 64 tcggggtcctgttctgccttcccaacagacccgtgaggaacgggtgcagatgaacaatca 5
Query: 602 ccc 604
|||
Sbjct: 4 ccc 2
>gb|AV918285.1|AV918285 AV918285 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20i09 3', mRNA sequence
Length = 607
Score = 149 bits (75), Expect = 8e-034
Identities = 123/139 (88%)
Strand = Plus / Plus
Query: 422 tgcagtccaggccacactcctccaggagcgggccgttgctcttggcgaggaacgggtcga 481
|||||||||| || ||||||||||| || ||||||| | ||||||||||||| |||| |
Sbjct: 467 tgcagtccagaccgcactcctccagaagagggccgtcggtcttggcgaggaaagggttca 526
Query: 482 cgcggacccacaggagcgagaagatcgaggccagcaggatggaccagacgatgacgatcg 541
| || |||||||||||||||| |||||| |||| |||||||||||||||||| |||||||
Sbjct: 527 cacgcacccacaggagcgagatgatcgaagccaacaggatggaccagacgatcacgatcg 586
Query: 542 tcggcgtcctgttctgcct 560
|||| ||||||||||||||
Sbjct: 587 tcggggtcctgttctgcct 605
>gb|BJ452844.1|BJ452844 BJ452844 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak40k14 5', mRNA sequence
Length = 551
Score = 149 bits (75), Expect = 8e-034
Identities = 136/155 (87%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 422 tgcagtccaggccacactcctccaggagcgggccgttgctcttggcgaggaacgggtcga 481
|||||||||| || ||||||||||| || ||||||| | ||||||||||||| |||| |
Sbjct: 170 tgcagtccagaccgcactcctccagaagagggccgtcggtcttggcgaggaaagggttca 111
Query: 482 cgcggacccacaggagcgagaagatcgaggccagcaggatggaccagacgatgacgatcg 541
| || |||||||||||||||| |||||| |||| |||||||||||||||||| |||||||
Sbjct: 110 cacgcacccacaggagcgagatgatcgaagccaacaggatggaccagacgatcacgatcg 51
Query: 542 tcggcgtcctgttctgcctccccaccagacccttg 576
|||| ||||||||| |||| |||| ||||||||||
Sbjct: 50 tcggggtcctgttc-gccttcccaacagacccttg 17
>gb|BI958555.1|BI958555 HVSMEn0015J16f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0015J16f, mRNA sequence
Length = 631
Score = 145 bits (73), Expect = 1e-032
Identities = 150/176 (85%)
Strand = Plus / Plus
Query: 486 gacccacaggagcgagaagatcgaggccagcaggatggaccagacgatgacgatcgtcgg 545
|||||||| || |||||||| ||||| ||||||| ||||||| | ||||| || ||
Sbjct: 278 gacccacacaagggagaagatggaggcgagcaggacagaccagagcacaacgatggtggg 337
Query: 546 cgtcctgttctgcctccccaccagacccttgaggaacgggtacaggtggacgatcaccca 605
||||| |||||||||||||| || ||||||||||||||||| ||||||||||| |||||
Sbjct: 338 cgtccggttctgcctccccatgagccccttgaggaacgggtagaggtggacgatgaccca 397
Query: 606 gaaggcgaagaagagcttcccgaacagggggccccacgactcgtacccgttgttga 661
|||| |||||||||||||||||| || |||||||| ||| ||||||| |||||||
Sbjct: 398 naaggagaagaagagcttcccgaagagcgggccccaggacccgtacccattgttga 453
Score = 46.1 bits (23), Expect = 0.009
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 708 gagcgtggtcgggggtatcagcagggtggtccacttgaa 746
||||||||| || || ||||||||||| |||||||||||
Sbjct: 500 gagcgtggtgggcgggatcagcagggttgtccacttgaa 538
>gb|BM815945.1|BM815945 HC105B07_T3.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC105B07_T3.ab1 similar to cellulose synthase-6 [Zea
mays],cellulose synthase-7 [Zea mays],cellulose
synthase-8 [Zea mays],cellulose synthase catalytic
subunit-like protein [Arabidopsis thaliana],putative
cellulose synthase catalytic subunit [Arabidopsis
thaliana], mRNA sequence
Length = 898
Score = 135 bits (68), Expect = 1e-029
Identities = 123/140 (87%), Gaps = 1/140 (0%)
Strand = Plus / Minus
Query: 422 tgcagtccaggccacactcctccaggagcgggccgttgctcttggcgaggaacgggtcga 481
|||||||||| || ||||||||||| || ||||||| | ||||||||||||| |||| |
Sbjct: 162 tgcagtccagaccgcactcctccagaagagggccgtcggtcttggcgaggaaagggttca 103
Query: 482 cgcggacccacaggagcgagaagatcgaggccagcaggatggaccagacgatgacgatcg 541
| || |||||||||||||||| |||||| |||| |||||||||||||||||| |||||||
Sbjct: 102 cacgcacccacaggagcgagatgatcgaagccaacaggatggaccagacgatcacgatcg 43
Query: 542 tcggcgtcctgttctgcctc 561
|||| |||| ||||||||||
Sbjct: 42 tcggggtcc-gttctgcctc 24
>gb|BF259974.3|BF259974 HVSMEf0020M07f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0020M07f, mRNA sequence
Length = 533
Score = 133 bits (67), Expect = 5e-029
Identities = 112/127 (88%)
Strand = Plus / Minus
Query: 535 acgatcgtcggcgtcctgttctgcctccccaccagacccttgaggaacgggtacaggtgg 594
||||| || ||||||| |||||||||||||| || ||||||||||||||||| |||||
Sbjct: 475 acgatggtgggcgtccggttctgcctccccatgagccccttgaggaacgggtagaggtga 416
Query: 595 acgatcacccagaaggcgaagaagagcttcccgaacagggggccccacgactcgtacccg 654
||||| |||||||||| |||||||||||||||||| || |||||||| ||| |||||||
Sbjct: 415 acgatgacccagaaggagaagaagagcttcccgaagagcgggccccaggacccgtaccca 356
Query: 655 ttgttga 661
|||||||
Sbjct: 355 ttgttga 349
Score = 85.7 bits (43), Expect = 1e-014
Identities = 70/79 (88%)
Strand = Plus / Minus
Query: 834 gccctggaacaccgcgaacagatgcgccgaaacgcctccgatgacccagaactgctcgtt 893
||||||||| || |||||||||||||| || ||||| || ||||||||||||||||||||
Sbjct: 170 gccctggaagacggcgaacagatgcgcggacacgccacctatgacccagaactgctcgtt 111
Query: 894 cctccaccagtcgtcgatg 912
| ||||||||| ||||||
Sbjct: 110 acgccaccagtcctcgatg 92
Score = 46.1 bits (23), Expect = 0.009
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 708 gagcgtggtcgggggtatcagcagggtggtccacttgaa 746
||||||||| || || ||||||||||| |||||||||||
Sbjct: 302 gagcgtggtgggcgggatcagcagggttgtccacttgaa 264
>gb|AL499724.1|AL499724 AL499724 Hordeum vulgare Barke etiolated leaves Hordeum vulgare
subsp. vulgare cDNA clone HK03B21r 3', mRNA sequence
Length = 619
Score = 131 bits (66), Expect = 2e-028
Identities = 169/202 (83%), Gaps = 1/202 (0%)
Strand = Plus / Plus
Query: 486 gacccacaggagcgagaagatcgaggccagcaggatggaccagacgatgacgatcgtcgg 545
|||||| ||||| ||||||| |||||||||||||| |||||||| |||||||| || ||
Sbjct: 267 gacccagaggagggagaagaccgaggccagcaggacggaccagagtatgacgatggtggg 326
Query: 546 cgtcctgttctgcctccccaccagacccttgaggaacgggtacaggtggacgatcaccca 605
|||| |||||||| |||| |||||||||||||||||||||||||| | ||||||||
Sbjct: 327 agtccggttctgccggcccatgagacccttgaggaacgggtacaggtgcataatcaccca 386
Query: 606 gaaggcgaagaagagcttcccgaacagggggccccacgactcgtacccgttgttgatcgc 665
| || |||||| | ||| ||||| || || ||||| |||||||| ||| |||||| |||
Sbjct: 387 catggagaagaacaccttgccgaagagcggcccccatgactcgtagccgctgttgagcgc 446
Query: 666 gttcg-agatcccggccaccac 686
|| || ||| ||||||||||||
Sbjct: 447 gtccgaagaacccggccaccac 468
>gb|AV930906.1|AV930906 AV930906 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd25l19 3', mRNA sequence
Length = 505
Score = 129 bits (65), Expect = 8e-028
Identities = 164/197 (83%)
Strand = Plus / Plus
Query: 471 gaacgggtcgacgcggacccacaggagcgagaagatcgaggccagcaggatggaccagac 530
||||||||||| ||| |||||||| | |||||||| || || || ||||||| ||||||
Sbjct: 146 gaacgggtcgatgcgaacccacagcaaggagaagatggatgcaagaaggatggcccagac 205
Query: 531 gatgacgatcgtcggcgtcctgttctgcctccccaccagacccttgaggaacgggtacag 590
|| ||||| |||||||| | |||||||| |||| || ||||||||||| |||||||
Sbjct: 206 gacaacgatggtcggcgtgcggttctgccgtcccattagccccttgaggaatgggtacaa 265
Query: 591 gtggacgatcacccagaaggcgaagaagagcttcccgaacagggggccccacgactcgta 650
||||| |||||||||||||| ||||||||||||||||| || || ||||| |||| ||
Sbjct: 266 gtggataatcacccagaaggcaaagaagagcttcccgaaaagcggtccccatgactgata 325
Query: 651 cccgttgttgatcgcgt 667
||| ||||||||||||
Sbjct: 326 gccgctgttgatcgcgt 342
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 580,522
Number of Sequences: 312970
Number of extensions: 580522
Number of successful extensions: 195539
Number of sequences better than 0.5: 212
Number of HSP's better than 0.5 without gapping: 211
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 194816
Number of HSP's gapped (non-prelim): 641
length of query: 3914
length of database: 175,134,539
effective HSP length: 20
effective length of query: 3894
effective length of database: 168,875,139
effective search space: 657599791266
effective search space used: 657599791266
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)