BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2276392.2.1
(644 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BE421373.1|BE421373 HWM008.F06 ITEC HWM Barley Leaf Libr... 391 e-107
gb|BE194709.2|BE194709 HVSMEh0086J14f Hordeum vulgare 5-45 ... 391 e-107
gb|BE216214.1|BE216214 HV_CEb0009N17f Hordeum vulgare seedl... 391 e-107
gb|BG343388.2|BG343388 HVSMEg0005J22f Hordeum vulgare pre-a... 391 e-107
gb|BM374933.1|BM374933 EBma05_SQ003_K10_R maternal, 12 DPA,... 391 e-107
gb|BQ460187.1|BQ460187 HA06P14r HA Hordeum vulgare subsp. v... 391 e-107
gb|BQ460295.1|BQ460295 HA06L05r HA Hordeum vulgare subsp. v... 391 e-107
gb|BQ464308.1|BQ464308 HF01O16T HF Hordeum vulgare subsp. v... 391 e-107
gb|BQ469439.1|BQ469439 HM04L08r HM Hordeum vulgare subsp. v... 391 e-107
gb|BQ659847.1|BQ659847 HF01O16w HF Hordeum vulgare subsp. v... 391 e-107
gb|BM368093.2|BM368093 EBed01_SQ002_C14_R endosperm, 6 DPA,... 391 e-107
gb|BM097663.2|BM097663 EBem04_SQ002_F16_R embryo, 12 DPA, n... 391 e-107
gb|BM097870.2|BM097870 EBem04_SQ002_P09_R embryo, 12 DPA, n... 391 e-107
gb|BM377816.2|BM377816 EBem04_SQ004_E08_R embryo, 12 DPA, n... 391 e-107
gb|BM375604.2|BM375604 EBem06_SQ003_N15_R embryo, 21 DPA, n... 391 e-107
gb|BI779914.2|BI779914 EBem07_SQ001_J04_R embryo, 28 DPA, n... 391 e-107
gb|BM369468.2|BM369468 EBem07_SQ003_K20_R embryo, 28 DPA, n... 391 e-107
gb|BM098698.2|BM098698 EBem08_SQ003_N05_R embryo, 40 DPA, n... 391 e-107
gb|BM370257.2|BM370257 EBro08_SQ003_K05_R root, 3 week, dro... 391 e-107
gb|BQ765093.1|BQ765093 EBca01_SQ005_D20_R carpel, pre-anthe... 391 e-107
gb|BQ766940.1|BQ766940 EBro08_SQ007_E14_R root, 3 week, dro... 391 e-107
gb|BU975008.1|BU975008 HB29M24r BC Hordeum vulgare subsp. v... 391 e-107
gb|BU975197.1|BU975197 HB30G05r BC Hordeum vulgare subsp. v... 391 e-107
gb|BU979482.1|BU979482 HA16E22r HA Hordeum vulgare subsp. v... 391 e-107
gb|BU981600.1|BU981600 HA24B13r HA Hordeum vulgare subsp. v... 391 e-107
gb|BU984631.1|BU984631 HF04I03r HF Hordeum vulgare subsp. v... 391 e-107
gb|BU988981.1|BU988981 HF19G03r HF Hordeum vulgare subsp. v... 391 e-107
gb|CA030739.1|CA030739 HX07P18r HX Hordeum vulgare subsp. v... 391 e-107
gb|CA031776.1|CA031776 HX11B17r HX Hordeum vulgare subsp. v... 391 e-107
gb|CB875332.1|CB875332 HX07P18w HX Hordeum vulgare subsp. v... 391 e-107
gb|CK124087.1|CK124087 BES1824107a18 BES1824 Hordeum vulgar... 391 e-107
gb|CK124520.1|CK124520 BES1824109g23 BES1824 Hordeum vulgar... 391 e-107
gb|CK125309.1|CK125309 BES1824107k12 BES1824 Hordeum vulgar... 391 e-107
gb|BM100540.2|BM100540 EBma01_SQ005_I07_R maternal, 4 DPA, ... 385 e-105
gb|CB876380.1|CB876380 HX11B17w HX Hordeum vulgare subsp. v... 385 e-105
gb|BG345169.2|BG345169 HVSMEg0018P11f Hordeum vulgare pre-a... 383 e-105
gb|BE602589.3|BE602589 HVSMEh0100E03f Hordeum vulgare 5-45 ... 383 e-105
gb|BQ657857.1|BQ657857 HA06L05u HA Hordeum vulgare subsp. v... 383 e-105
gb|BM374027.2|BM374027 EBma03_SQ003_G19_R maternal, 8 DPA, ... 383 e-105
gb|BM097948.2|BM097948 EBpi03_SQ002_C02_R pistil, 4 DPA, no... 383 e-105
gb|AJ463505.1|AJ463505 AJ463505 S00002 Hordeum vulgare subs... 379 e-104
gb|CK123586.1|CK123586 BES1824104i20 BES1824 Hordeum vulgar... 377 e-103
gb|BQ753628.1|BQ753628 EBan01_SQ004_M18_R anther, yellow st... 375 e-102
gb|BU983205.1|BU983205 HA28O08r HA Hordeum vulgare subsp. v... 375 e-102
gb|BF621734.2|BF621734 HVSMEa0012D07f Hordeum vulgare seedl... 373 e-102
gb|BJ467052.1|BJ467052 BJ467052 K. Sato unpublished cDNA li... 371 e-101
gb|BM375644.2|BM375644 EBem06_SQ003_P15_R embryo, 21 DPA, n... 369 e-101
gb|AJ436292.1|AJ436292 AJ436292 S00002 Hordeum vulgare subs... 367 e-100
gb|BU967275.1|BU967275 HB03M20r BC Hordeum vulgare subsp. v... 367 e-100
gb|BG342877.1|BG342877 HVSMEg0001B08f Hordeum vulgare pre-a... 361 2e-098
gb|BG345173.2|BG345173 HVSMEg0018P19f Hordeum vulgare pre-a... 357 3e-097
gb|CA027503.1|CA027503 HZ59C07r HZ Hordeum vulgare subsp. v... 353 5e-096
gb|BQ665801.1|BQ665801 HZ01C17u HZ Hordeum vulgare subsp. v... 331 2e-089
gb|BQ754250.1|BQ754250 EBca01_SQ003_F06_R carpel, pre-anthe... 321 2e-086
gb|BJ464661.1|BJ464661 BJ464661 K. Sato unpublished cDNA li... 315 1e-084
gb|BF258480.2|BF258480 HVSMEf0015N09f Hordeum vulgare seedl... 307 2e-082
gb|AJ463506.1|AJ463506 AJ463506 S00002 Hordeum vulgare subs... 305 9e-082
gb|AJ463508.1|AJ463508 AJ463508 S00002 Hordeum vulgare subs... 303 4e-081
gb|AJ463507.1|AJ463507 AJ463507 S00002 Hordeum vulgare subs... 299 6e-080
gb|CB881951.1|CB881951 HM11G10w HM Hordeum vulgare subsp. v... 293 4e-078
gb|CV054282.1|CV054282 BNEL108g6 Barley EST endosperm libra... 280 5e-074
gb|CV056830.1|CV056830 BNEL21a7 Barley EST endosperm librar... 280 5e-074
gb|CV062703.1|CV062703 BNEL82a4 Barley EST endosperm librar... 280 5e-074
gb|BE420950.1|BE420950 HWM004.C03 ITEC HWM Barley Leaf Libr... 272 1e-071
gb|AL504595.1|AL504595 AL504595 Hordeum vulgare Barke roots... 272 1e-071
gb|AL505281.1|AL505281 AL505281 Hordeum vulgare Barke roots... 272 1e-071
gb|AL505890.1|AL505890 AL505890 Hordeum vulgare Barke roots... 272 1e-071
gb|AL508211.1|AL508211 AL508211 Hordeum vulgare Barke devel... 272 1e-071
gb|BF257506.2|BF257506 HVSMEf0013B15f Hordeum vulgare seedl... 272 1e-071
gb|BF630421.3|BF630421 HVSMEb0009F02f Hordeum vulgare seedl... 272 1e-071
gb|BF259393.3|BF259393 HVSMEf0019H13f Hordeum vulgare seedl... 272 1e-071
gb|BM374838.1|BM374838 EBma05_SQ003_C12_R maternal, 12 DPA,... 272 1e-071
gb|AV914332.1|AV914332 AV914332 K. Sato unpublished cDNA li... 272 1e-071
gb|AV915414.1|AV915414 AV915414 K. Sato unpublished cDNA li... 272 1e-071
gb|AJ460343.1|AJ460343 AJ460343 S00002 Hordeum vulgare subs... 272 1e-071
gb|BJ458462.1|BJ458462 BJ458462 K. Sato unpublished cDNA li... 272 1e-071
gb|BJ464345.1|BJ464345 BJ464345 K. Sato unpublished cDNA li... 272 1e-071
gb|BJ466670.1|BJ466670 BJ466670 K. Sato unpublished cDNA li... 272 1e-071
gb|BJ470118.1|BJ470118 BJ470118 K. Sato unpublished cDNA li... 272 1e-071
gb|BJ471288.1|BJ471288 BJ471288 K. Sato unpublished cDNA li... 272 1e-071
gb|BJ473441.1|BJ473441 BJ473441 K. Sato unpublished cDNA li... 272 1e-071
gb|BJ473442.1|BJ473442 BJ473442 K. Sato unpublished cDNA li... 272 1e-071
gb|BJ473572.1|BJ473572 BJ473572 K. Sato unpublished cDNA li... 272 1e-071
gb|BJ473906.1|BJ473906 BJ473906 K. Sato unpublished cDNA li... 272 1e-071
gb|BQ458685.1|BQ458685 HA04I04r HA Hordeum vulgare subsp. v... 272 1e-071
gb|BQ458997.1|BQ458997 HA02J22r HA Hordeum vulgare subsp. v... 272 1e-071
gb|BQ459830.1|BQ459830 HA07P13r HA Hordeum vulgare subsp. v... 272 1e-071
gb|BQ460432.1|BQ460432 HA09K08r HA Hordeum vulgare subsp. v... 272 1e-071
gb|BQ465152.1|BQ465152 HU02M20r HU Hordeum vulgare subsp. v... 272 1e-071
gb|BQ469008.1|BQ469008 HM03B13r HM Hordeum vulgare subsp. v... 272 1e-071
gb|BQ471312.1|BQ471312 HV02A14r HV Hordeum vulgare subsp. v... 272 1e-071
gb|BM368104.2|BM368104 EBed01_SQ002_D01_R endosperm, 6 DPA,... 272 1e-071
gb|BM368117.2|BM368117 EBed01_SQ002_D16_R endosperm, 6 DPA,... 272 1e-071
gb|BM375440.2|BM375440 EBem06_SQ003_F16_R embryo, 21 DPA, n... 272 1e-071
gb|BI780495.2|BI780495 EBem08_SQ001_I09_R embryo, 40 DPA, n... 272 1e-071
gb|BM099134.2|BM099134 EBes01_SQ002_F07_R embryo sac, 4-6 D... 272 1e-071
gb|BM099348.2|BM099348 EBes01_SQ002_P18_R embryo sac, 4-6 D... 272 1e-071
gb|BM372928.2|BM372928 EBma04_SQ002_G21_R maternal, 10 DPA,... 272 1e-071
gb|BM371925.2|BM371925 EBma08_SQ004_G16_R maternal, 28 DPA,... 272 1e-071
gb|BI779039.2|BI779039 EBro01_SQ002_K24_R root, 3 week, hyd... 272 1e-071
gb|BQ754572.1|BQ754572 EBed01_SQ003_D03_R endosperm, 6 DPA,... 272 1e-071
gb|BQ754595.1|BQ754595 EBed01_SQ003_E04_R endosperm, 6 DPA,... 272 1e-071
gb|BQ763631.1|BQ763631 EBro03_SQ005_B02_R root, 3 week, wat... 272 1e-071
gb|BQ764513.1|BQ764513 EBca01_SQ004_H04_R carpel, pre-anthe... 272 1e-071
gb|BQ764622.1|BQ764622 EBca01_SQ004_L12_R carpel, pre-anthe... 272 1e-071
gb|BQ767043.1|BQ767043 EBro08_SQ007_D23_R root, 3 week, dro... 272 1e-071
gb|BU974141.1|BU974141 HB27A08r BC Hordeum vulgare subsp. v... 272 1e-071
gb|BU976212.1|BU976212 HA03F11r HA Hordeum vulgare subsp. v... 272 1e-071
gb|BU976225.1|BU976225 HA03F20r HA Hordeum vulgare subsp. v... 272 1e-071
gb|BU976266.1|BU976266 HA03G20r HA Hordeum vulgare subsp. v... 272 1e-071
gb|BU976919.1|BU976919 HA10I15r HA Hordeum vulgare subsp. v... 272 1e-071
gb|BU978562.1|BU978562 HA13J14r HA Hordeum vulgare subsp. v... 272 1e-071
gb|BU979003.1|BU979003 HA14O04r HA Hordeum vulgare subsp. v... 272 1e-071
gb|BU979792.1|BU979792 HA17F08r HA Hordeum vulgare subsp. v... 272 1e-071
gb|BU980507.1|BU980507 HA20N20r HA Hordeum vulgare subsp. v... 272 1e-071
gb|BU982094.1|BU982094 HA25I03r HA Hordeum vulgare subsp. v... 272 1e-071
gb|BU983453.1|BU983453 HA29M15r HA Hordeum vulgare subsp. v... 272 1e-071
gb|BU983502.1|BU983502 HA29P05r HA Hordeum vulgare subsp. v... 272 1e-071
gb|BU985726.1|BU985726 HF08G23r HF Hordeum vulgare subsp. v... 272 1e-071
gb|BU996207.1|BU996207 HM12N11r HM Hordeum vulgare subsp. v... 272 1e-071
gb|CA004881.1|CA004881 HS18P08r HS Hordeum vulgare subsp. v... 272 1e-071
gb|CA015487.1|CA015487 HT14H10r HT Hordeum vulgare subsp. v... 272 1e-071
gb|CA025128.1|CA025128 HZ51E16r HZ Hordeum vulgare subsp. v... 272 1e-071
gb|CA026659.1|CA026659 HZ56J01r HZ Hordeum vulgare subsp. v... 272 1e-071
gb|CK124122.1|CK124122 BES1824107c07 BES1824 Hordeum vulgar... 272 1e-071
gb|BE060145.3|BE060145 HVSMEg0011A14f Hordeum vulgare pre-a... 270 5e-071
gb|BM377651.2|BM377651 EBem04_SQ003_M09_R embryo, 12 DPA, n... 264 3e-069
gb|BM371361.2|BM371361 EBma08_SQ002_G24_R maternal, 28 DPA,... 264 3e-069
gb|BM371393.2|BM371393 EBma08_SQ002_I24_R maternal, 28 DPA,... 264 3e-069
gb|BU995797.1|BU995797 HM11G10r HM Hordeum vulgare subsp. v... 262 1e-068
gb|BQ661668.1|BQ661668 HM04L08u HM Hordeum vulgare subsp. v... 260 5e-068
gb|BG416733.2|BG416733 HVSMEk0014E19f Hordeum vulgare testa... 258 2e-067
gb|AV919359.1|AV919359 AV919359 K. Sato unpublished cDNA li... 258 2e-067
gb|AV920502.1|AV920502 AV920502 K. Sato unpublished cDNA li... 258 2e-067
gb|AJ460342.1|AJ460342 AJ460342 S00002 Hordeum vulgare subs... 258 2e-067
gb|BJ450954.1|BJ450954 BJ450954 K. Sato unpublished cDNA li... 258 2e-067
gb|BQ764063.1|BQ764063 EBro03_SQ006_N01_R root, 3 week, wat... 258 2e-067
gb|BI956761.1|BI956761 HVSMEn0005D09f Hordeum vulgare rachi... 256 8e-067
gb|CA016435.1|CA016435 HV08P17u HV Hordeum vulgare subsp. v... 256 8e-067
gb|AL503140.1|AL503140 AL503140 Hordeum vulgare Barke roots... 254 3e-066
gb|AV934733.1|AV934733 AV934733 K. Sato unpublished cDNA li... 254 3e-066
gb|AJ461977.1|AJ461977 AJ461977 S00002 Hordeum vulgare subs... 254 3e-066
gb|BM100316.2|BM100316 EBma01_SQ001_N09_R maternal, 4 DPA, ... 252 1e-065
gb|BU976226.1|BU976226 HA03F20u HA Hordeum vulgare subsp. v... 250 5e-065
gb|BI953030.1|BI953030 HVSMEm0009G11f Hordeum vulgare green... 248 2e-064
gb|BM096564.2|BM096564 EBma05_SQ001_L19_R maternal, 12 DPA,... 248 2e-064
gb|CA016662.1|CA016662 HV06J23u HV Hordeum vulgare subsp. v... 244 3e-063
gb|AJ463509.1|AJ463509 AJ463509 S00002 Hordeum vulgare subs... 238 2e-061
gb|BQ761555.1|BQ761555 EBem10_SQ001_H01_R embryo, 2 Day ger... 238 2e-061
gb|BF624294.2|BF624294 HVSMEa0013I17f Hordeum vulgare seedl... 232 1e-059
gb|AV932627.1|AV932627 AV932627 K. Sato unpublished cDNA li... 232 1e-059
gb|BU970769.1|BU970769 HB15K06r BC Hordeum vulgare subsp. v... 232 1e-059
gb|BU988321.1|BU988321 HF17E20r HF Hordeum vulgare subsp. v... 232 1e-059
gb|BM441175.2|BM441175 EBed02_SQ002_K07_R endosperm, 8 DPA,... 222 1e-056
gb|BQ755973.1|BQ755973 EBem04_SQ004_N22_R embryo, 12 DPA, n... 222 1e-056
gb|CA018559.1|CA018559 HV08P17r HV Hordeum vulgare subsp. v... 222 1e-056
gb|BQ665802.1|BQ665802 HZ01C18u HZ Hordeum vulgare subsp. v... 218 2e-055
gb|BQ656437.1|BQ656437 HA04I04u HA Hordeum vulgare subsp. v... 216 7e-055
gb|BU976267.1|BU976267 HA03G20u HA Hordeum vulgare subsp. v... 216 7e-055
gb|AL511449.1|AL511449 AL511449 Hordeum vulgare Barke devel... 212 1e-053
gb|BQ661343.1|BQ661343 HM03B13u HM Hordeum vulgare subsp. v... 210 4e-053
gb|AL501898.1|AL501898 AL501898 Hordeum vulgare Barke roots... 204 3e-051
gb|BE454775.3|BE454775 HVSMEh0095A09f Hordeum vulgare 5-45 ... 196 6e-049
gb|BQ664142.1|BQ664142 HV02A14u HV Hordeum vulgare subsp. v... 196 6e-049
gb|BM377947.2|BM377947 EBem04_SQ004_K21_R embryo, 12 DPA, n... 186 6e-046
gb|BE213979.3|BE213979 HV_CEb0001N01f Hordeum vulgare seedl... 184 2e-045
gb|BQ460589.1|BQ460589 HA06I05r HA Hordeum vulgare subsp. v... 184 2e-045
gb|BQ657902.1|BQ657902 HA06I05u HA Hordeum vulgare subsp. v... 184 2e-045
gb|BM375200.2|BM375200 EBem06_SQ002_K08_R embryo, 21 DPA, n... 184 2e-045
gb|BM369507.2|BM369507 EBem07_SQ003_M16_R embryo, 28 DPA, n... 184 2e-045
gb|BM374112.2|BM374112 EBma03_SQ003_K24_R maternal, 8 DPA, ... 184 2e-045
gb|BQ759365.1|BQ759365 EBpi01_SQ004_F07_R pistil, 1 DPA, no... 184 2e-045
gb|BQ762849.1|BQ762849 EBro02_SQ006_E11_R root, 3 week, hyd... 184 2e-045
gb|BU968780.1|BU968780 HB08J03r BC Hordeum vulgare subsp. v... 184 2e-045
gb|BU974112.1|BU974112 HB26O24r BC Hordeum vulgare subsp. v... 184 2e-045
gb|CA001877.1|CA001877 HS05N18r HS Hordeum vulgare subsp. v... 184 2e-045
gb|CA002174.1|CA002174 HS06L20r HS Hordeum vulgare subsp. v... 184 2e-045
gb|CA012963.1|CA012963 HT06P15r HT Hordeum vulgare subsp. v... 184 2e-045
gb|CA028373.1|CA028373 HZ61M16r HZ Hordeum vulgare subsp. v... 184 2e-045
gb|AJ461976.1|AJ461976 AJ461976 S00002 Hordeum vulgare subs... 174 2e-042
gb|AJ463612.1|AJ463612 AJ463612 S00002 Hordeum vulgare subs... 172 9e-042
gb|CA000990.1|CA000990 HS05N18u HS Hordeum vulgare subsp. v... 172 9e-042
gb|BM375633.2|BM375633 EBem06_SQ003_P02_R embryo, 21 DPA, n... 170 4e-041
gb|BJ464210.1|BJ464210 BJ464210 K. Sato unpublished cDNA li... 167 6e-040
gb|BQ763491.1|BQ763491 EBro02_SQ008_E16_R root, 3 week, hyd... 167 6e-040
gb|BQ656663.1|BQ656663 HA02J22u HA Hordeum vulgare subsp. v... 165 2e-039
gb|CA023041.1|CA023041 HZ45B02r HZ Hordeum vulgare subsp. v... 163 9e-039
gb|CA023191.1|CA023191 HZ45I01r HZ Hordeum vulgare subsp. v... 163 9e-039
gb|CA029103.1|CA029103 HZ64D09r HZ Hordeum vulgare subsp. v... 163 9e-039
gb|BF066072.1|BF066072 HV_CEb0014M08f Hordeum vulgare seedl... 161 3e-038
gb|BE216791.1|BE216791 HV_CEb0011J13f Hordeum vulgare seedl... 159 1e-037
gb|BQ657105.1|BQ657105 HA09K08u HA Hordeum vulgare subsp. v... 155 2e-036
gb|BU976920.1|BU976920 HA10I15u HA Hordeum vulgare subsp. v... 155 2e-036
gb|BQ760473.1|BQ760473 EBro02_SQ003_I20_R root, 3 week, hyd... 151 3e-035
gb|CA000805.1|CA000805 HS06L20u HS Hordeum vulgare subsp. v... 151 3e-035
gb|BQ459530.1|BQ459530 HA08N04r HA Hordeum vulgare subsp. v... 149 1e-034
gb|BM097054.1|BM097054 EBpi07_SQ002_E02_R pistil, 12 DPA, n... 147 5e-034
gb|BM376560.2|BM376560 EBem05_SQ002_J04_R embryo, 14 DPA, n... 145 2e-033
gb|AL499768.1|AL499768 AL499768 Hordeum vulgare Barke etiol... 137 5e-031
gb|BQ761692.1|BQ761692 EBem10_SQ001_F16_R embryo, 2 Day ger... 135 2e-030
gb|BJ476081.1|BJ476081 BJ476081 K. Sato unpublished cDNA li... 133 8e-030
gb|CA027129.1|CA027129 HZ57P17r HZ Hordeum vulgare subsp. v... 133 8e-030
gb|BM444649.1|BM444649 EBem09_SQ006_B10_R embryo, 1 Day ger... 129 1e-028
gb|BQ657542.1|BQ657542 HA07P13u HA Hordeum vulgare subsp. v... 125 2e-027
gb|BJ469015.1|BJ469015 BJ469015 K. Sato unpublished cDNA li... 123 8e-027
gb|CA001217.1|CA001217 HS18P08u HS Hordeum vulgare subsp. v... 123 8e-027
gb|BU983291.1|BU983291 HA29D08r HA Hordeum vulgare subsp. v... 121 3e-026
gb|BU994170.1|BU994170 HM05P17r HM Hordeum vulgare subsp. v... 121 3e-026
gb|CB880836.1|CB880836 HM07P17w HM Hordeum vulgare subsp. v... 121 3e-026
gb|AJ460341.1|AJ460341 AJ460341 S00002 Hordeum vulgare subs... 119 1e-025
gb|BM373861.2|BM373861 EBma03_SQ002_P04_R maternal, 8 DPA, ... 117 5e-025
gb|BM444667.1|BM444667 EBem09_SQ006_C05_R embryo, 1 Day ger... 105 2e-021
gb|BM373997.1|BM373997 EBma03_SQ003_F11_R maternal, 8 DPA, ... 98 4e-019
gb|CA011140.1|CA011140 HT06P15u HT Hordeum vulgare subsp. v... 94 7e-018
gb|BM372835.1|BM372835 EBma04_SQ002_B14_R maternal, 10 DPA,... 88 4e-016
gb|BQ657324.1|BQ657324 HA08N04u HA Hordeum vulgare subsp. v... 88 4e-016
gb|BQ657376.1|BQ657376 HA08K03u HA Hordeum vulgare subsp. v... 86 2e-015
gb|BU983016.1|BU983016 HA28E19r HA Hordeum vulgare subsp. v... 86 2e-015
gb|BU977150.1|BU977150 HA10O21u HA Hordeum vulgare subsp. v... 84 6e-015
gb|BJ468539.1|BJ468539 BJ468539 K. Sato unpublished cDNA li... 76 2e-012
gb|AJ436583.1|AJ436583 AJ436583 S00002 Hordeum vulgare subs... 70 1e-010
gb|BJ465295.1|BJ465295 BJ465295 K. Sato unpublished cDNA li... 70 1e-010
gb|BU995950.1|BU995950 HM11O02r HM Hordeum vulgare subsp. v... 70 1e-010
gb|BU983036.1|BU983036 HA28F20r HA Hordeum vulgare subsp. v... 66 2e-009
gb|BQ756271.1|BQ756271 EBem06_SQ004_E21_R embryo, 21 DPA, n... 58 4e-007
gb|BF257711.2|BF257711 HVSMEf0013K15f Hordeum vulgare seedl... 50 9e-005
gb|BM101453.2|BM101453 EBpi01_SQ003_O08_R pistil, 1 DPA, no... 50 9e-005
gb|CV058619.1|CV058619 BNEL3A2 Barley EST endosperm library... 50 9e-005
gb|BQ766313.1|BQ766313 EBro08_SQ005_J15_R root, 3 week, dro... 38 0.34
>gb|BE421373.1|BE421373 HWM008.F06 ITEC HWM Barley Leaf Library Hordeum vulgare subsp.
vulgare cDNA clone HWM008.F06, mRNA sequence
Length = 1046
Score = 391 bits (197), Expect = e-107
Identities = 320/361 (88%)
Strand = Plus / Plus
Query: 60 agatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccaga 119
|||||||||||||||| || ||||| ||||| ||||||||||||||||| ||||||||||
Sbjct: 165 agatggtgcagcggctgacataccgaaagcgccacagctacgccaccaagtcgaaccaga 224
Query: 120 cccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcga 179
| |||||||||||||| || ||||||| |||||||||||||||||||| ||||| ||||
Sbjct: 225 ctcgcgtcgtcaagaccccaggtgggaggcttgtgtaccagtacaccaaaaagcgggcga 284
Query: 180 gcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctg 239
| || || || ||||| || ||||||||||||||||||||||||||||||||||| |||
Sbjct: 285 gtgggccaaaatgcccggttaccgggaagaagatccaaggaattccacacctgaggccta 344
Query: 240 ctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcg 299
||||||||||||||||||| ||| ||||||||| |||||||| || ||||| || || |
Sbjct: 345 ctgagtacaagaggtccagattgtcaaggaaccggaggactgtaaaccgtccttacggtg 404
Query: 300 gtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaac 359
|||||||||||||| ||||||| ||||||||||||||| | || |||||||||||||| |
Sbjct: 405 gtgttctgtctggtcctgcagtcagggagaggatcatcagggcgtttttggttgaggagc 464
Query: 360 agaagatagtgaagaaggtgttgaagatccaaaagaccaaggataaggcctccaagagct 419
||||||| |||||||||||| |||||||||| ||||||||||| ||| || |||||||||
Sbjct: 465 agaagattgtgaagaaggtgctgaagatccagaagaccaaggaaaagaccaccaagagct 524
Query: 420 a 420
|
Sbjct: 525 a 525
>gb|BE194709.2|BE194709 HVSMEh0086J14f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0086J14f, mRNA sequence
Length = 576
Score = 391 bits (197), Expect = e-107
Identities = 320/361 (88%)
Strand = Plus / Plus
Query: 60 agatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccaga 119
|||||||||||||||| || ||||| ||||| ||||||||||||||||| ||||||||||
Sbjct: 54 agatggtgcagcggctgacataccgaaagcgccacagctacgccaccaagtcgaaccaga 113
Query: 120 cccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcga 179
| |||||||||||||| || ||||||| |||||||||||||||||||| ||||| ||||
Sbjct: 114 ctcgcgtcgtcaagaccccaggtgggaggcttgtgtaccagtacaccaaaaagcgggcga 173
Query: 180 gcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctg 239
| || || || ||||| || ||||||||||||||||||||||||||||||||||| |||
Sbjct: 174 gtgggccaaaatgcccggttaccgggaagaagatccaaggaattccacacctgaggccta 233
Query: 240 ctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcg 299
||||||||||||||||||| ||| ||||||||| |||||||| || ||||| || || |
Sbjct: 234 ctgagtacaagaggtccagattgtcaaggaaccggaggactgtaaaccgtccttacggtg 293
Query: 300 gtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaac 359
|||||||||||||| ||||||| ||||||||||||||| | || |||||||||||||| |
Sbjct: 294 gtgttctgtctggtcctgcagtcagggagaggatcatcagggcgtttttggttgaggagc 353
Query: 360 agaagatagtgaagaaggtgttgaagatccaaaagaccaaggataaggcctccaagagct 419
||||||| |||||||||||| |||||||||| ||||||||||| ||| || |||||||||
Sbjct: 354 agaagattgtgaagaaggtgctgaagatccagaagaccaaggaaaagaccaccaagagct 413
Query: 420 a 420
|
Sbjct: 414 a 414
>gb|BE216214.1|BE216214 HV_CEb0009N17f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0009N17f, mRNA sequence
Length = 568
Score = 391 bits (197), Expect = e-107
Identities = 320/361 (88%)
Strand = Plus / Plus
Query: 60 agatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccaga 119
|||||||||||||||| || ||||| ||||| ||||||||||||||||| ||||||||||
Sbjct: 70 agatggtgcagcggctgacataccgaaagcgccacagctacgccaccaagtcgaaccaga 129
Query: 120 cccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcga 179
| |||||||||||||| || ||||||| |||||||||||||||||||| ||||| ||||
Sbjct: 130 ctcgcgtcgtcaagaccccaggtgggaggcttgtgtaccagtacaccaaaaagcgggcga 189
Query: 180 gcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctg 239
| || || || ||||| || ||||||||||||||||||||||||||||||||||| |||
Sbjct: 190 gtgggccaaaatgcccggttaccgggaagaagatccaaggaattccacacctgaggccta 249
Query: 240 ctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcg 299
||||||||||||||||||| ||| ||||||||| |||||||| || ||||| || || |
Sbjct: 250 ctgagtacaagaggtccagattgtcaaggaaccggaggactgtaaaccgtccttacggtg 309
Query: 300 gtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaac 359
|||||||||||||| ||||||| ||||||||||||||| | || |||||||||||||| |
Sbjct: 310 gtgttctgtctggtcctgcagtcagggagaggatcatcagggcgtttttggttgaggagc 369
Query: 360 agaagatagtgaagaaggtgttgaagatccaaaagaccaaggataaggcctccaagagct 419
||||||| |||||||||||| |||||||||| ||||||||||| ||| || |||||||||
Sbjct: 370 agaagattgtgaagaaggtgctgaagatccagaagaccaaggaaaagaccaccaagagct 429
Query: 420 a 420
|
Sbjct: 430 a 430
>gb|BG343388.2|BG343388 HVSMEg0005J22f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0005J22f, mRNA sequence
Length = 637
Score = 391 bits (197), Expect = e-107
Identities = 320/361 (88%)
Strand = Plus / Plus
Query: 60 agatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccaga 119
|||||||||||||||| || ||||| ||||| ||||||||||||||||| ||||||||||
Sbjct: 47 agatggtgcagcggctgacataccgaaagcgccacagctacgccaccaagtcgaaccaga 106
Query: 120 cccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcga 179
| |||||||||||||| || ||||||| |||||||||||||||||||| ||||| ||||
Sbjct: 107 ctcgcgtcgtcaagaccccaggtgggaggcttgtgtaccagtacaccaaaaagcgggcga 166
Query: 180 gcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctg 239
| || || || ||||| || ||||||||||||||||||||||||||||||||||| |||
Sbjct: 167 gtgggccaaaatgcccggttaccgggaagaagatccaaggaattccacacctgaggccta 226
Query: 240 ctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcg 299
||||||||||||||||||| ||| ||||||||| |||||||| || ||||| || || |
Sbjct: 227 ctgagtacaagaggtccagattgtcaaggaaccggaggactgtaaaccgtccttacggtg 286
Query: 300 gtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaac 359
|||||||||||||| ||||||| ||||||||||||||| | || |||||||||||||| |
Sbjct: 287 gtgttctgtctggtcctgcagtcagggagaggatcatcagggcgtttttggttgaggagc 346
Query: 360 agaagatagtgaagaaggtgttgaagatccaaaagaccaaggataaggcctccaagagct 419
||||||| |||||||||||| |||||||||| ||||||||||| ||| || |||||||||
Sbjct: 347 agaagattgtgaagaaggtgctgaagatccagaagaccaaggaaaagaccaccaagagct 406
Query: 420 a 420
|
Sbjct: 407 a 407
>gb|BM374933.1|BM374933 EBma05_SQ003_K10_R maternal, 12 DPA, no treatment, cv Optic, EBma05
Hordeum vulgare subsp. vulgare cDNA clone
EBma05_SQ003_K10 5', mRNA sequence
Length = 506
Score = 391 bits (197), Expect = e-107
Identities = 320/361 (88%)
Strand = Plus / Plus
Query: 60 agatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccaga 119
|||||||||||||||| || ||||| ||||| ||||||||||||||||| ||||||||||
Sbjct: 43 agatggtgcagcggctgacataccgaaagcgccacagctacgccaccaagtcgaaccaga 102
Query: 120 cccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcga 179
| |||||||||||||| || ||||||| |||||||||||||||||||| ||||| ||||
Sbjct: 103 ctcgcgtcgtcaagaccccaggtgggaggcttgtgtaccagtacaccaaaaagcgggcga 162
Query: 180 gcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctg 239
| || || || ||||| || ||||||||||||||||||||||||||||||||||| |||
Sbjct: 163 gtgggccaaaatgcccggttaccgggaagaagatccaaggaattccacacctgaggccta 222
Query: 240 ctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcg 299
||||||||||||||||||| ||| ||||||||| |||||||| || ||||| || || |
Sbjct: 223 ctgagtacaagaggtccagattgtcaaggaaccggaggactgtaaaccgtccttacggtg 282
Query: 300 gtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaac 359
|||||||||||||| ||||||| ||||||||||||||| | || |||||||||||||| |
Sbjct: 283 gtgttctgtctggtcctgcagtcagggagaggatcatcagggcgtttttggttgaggagc 342
Query: 360 agaagatagtgaagaaggtgttgaagatccaaaagaccaaggataaggcctccaagagct 419
||||||| |||||||||||| |||||||||| ||||||||||| ||| || |||||||||
Sbjct: 343 agaagattgtgaagaaggtgctgaagatccagaagaccaaggaaaagaccaccaagagct 402
Query: 420 a 420
|
Sbjct: 403 a 403
>gb|BQ460187.1|BQ460187 HA06P14r HA Hordeum vulgare subsp. vulgare cDNA clone HA06P14
5-PRIME, mRNA sequence
Length = 560
Score = 391 bits (197), Expect = e-107
Identities = 320/361 (88%)
Strand = Plus / Plus
Query: 60 agatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccaga 119
|||||||||||||||| || ||||| ||||| ||||||||||||||||| ||||||||||
Sbjct: 59 agatggtgcagcggctgacataccgaaagcgccacagctacgccaccaagtcgaaccaga 118
Query: 120 cccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcga 179
| |||||||||||||| || ||||||| |||||||||||||||||||| ||||| ||||
Sbjct: 119 ctcgcgtcgtcaagaccccaggtgggaggcttgtgtaccagtacaccaaaaagcgggcga 178
Query: 180 gcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctg 239
| || || || ||||| || ||||||||||||||||||||||||||||||||||| |||
Sbjct: 179 gtgggccaaaatgcccggttaccgggaagaagatccaaggaattccacacctgaggccta 238
Query: 240 ctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcg 299
||||||||||||||||||| ||| ||||||||| |||||||| || ||||| || || |
Sbjct: 239 ctgagtacaagaggtccagattgtcaaggaaccggaggactgtaaaccgtccttacggtg 298
Query: 300 gtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaac 359
|||||||||||||| ||||||| ||||||||||||||| | || |||||||||||||| |
Sbjct: 299 gtgttctgtctggtcctgcagtcagggagaggatcatcagggcgtttttggttgaggagc 358
Query: 360 agaagatagtgaagaaggtgttgaagatccaaaagaccaaggataaggcctccaagagct 419
||||||| |||||||||||| |||||||||| ||||||||||| ||| || |||||||||
Sbjct: 359 agaagattgtgaagaaggtgctgaagatccagaagaccaaggaaaagaccaccaagagct 418
Query: 420 a 420
|
Sbjct: 419 a 419
>gb|BQ460295.1|BQ460295 HA06L05r HA Hordeum vulgare subsp. vulgare cDNA clone HA06L05
5-PRIME, mRNA sequence
Length = 547
Score = 391 bits (197), Expect = e-107
Identities = 320/361 (88%)
Strand = Plus / Plus
Query: 60 agatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccaga 119
|||||||||||||||| || ||||| ||||| ||||||||||||||||| ||||||||||
Sbjct: 58 agatggtgcagcggctgacataccgaaagcgccacagctacgccaccaagtcgaaccaga 117
Query: 120 cccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcga 179
| |||||||||||||| || ||||||| |||||||||||||||||||| ||||| ||||
Sbjct: 118 ctcgcgtcgtcaagaccccaggtgggaggcttgtgtaccagtacaccaaaaagcgggcga 177
Query: 180 gcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctg 239
| || || || ||||| || ||||||||||||||||||||||||||||||||||| |||
Sbjct: 178 gtgggccaaaatgcccggttaccgggaagaagatccaaggaattccacacctgaggccta 237
Query: 240 ctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcg 299
||||||||||||||||||| ||| ||||||||| |||||||| || ||||| || || |
Sbjct: 238 ctgagtacaagaggtccagattgtcaaggaaccggaggactgtaaaccgtccttacggtg 297
Query: 300 gtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaac 359
|||||||||||||| ||||||| ||||||||||||||| | || |||||||||||||| |
Sbjct: 298 gtgttctgtctggtcctgcagtcagggagaggatcatcagggcgtttttggttgaggagc 357
Query: 360 agaagatagtgaagaaggtgttgaagatccaaaagaccaaggataaggcctccaagagct 419
||||||| |||||||||||| |||||||||| ||||||||||| ||| || |||||||||
Sbjct: 358 agaagattgtgaagaaggtgctgaagatccagaagaccaaggaaaagaccaccaagagct 417
Query: 420 a 420
|
Sbjct: 418 a 418
>gb|BQ464308.1|BQ464308 HF01O16T HF Hordeum vulgare subsp. vulgare cDNA clone HF01O16
5-PRIME, mRNA sequence
Length = 619
Score = 391 bits (197), Expect = e-107
Identities = 320/361 (88%)
Strand = Plus / Plus
Query: 60 agatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccaga 119
|||||||||||||||| || ||||| ||||| ||||||||||||||||| ||||||||||
Sbjct: 69 agatggtgcagcggctgacataccgaaagcgccacagctacgccaccaagtcgaaccaga 128
Query: 120 cccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcga 179
| |||||||||||||| || ||||||| |||||||||||||||||||| ||||| ||||
Sbjct: 129 ctcgcgtcgtcaagaccccaggtgggaggcttgtgtaccagtacaccaaaaagcgggcga 188
Query: 180 gcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctg 239
| || || || ||||| || ||||||||||||||||||||||||||||||||||| |||
Sbjct: 189 gtgggccaaaatgcccggttaccgggaagaagatccaaggaattccacacctgaggccta 248
Query: 240 ctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcg 299
||||||||||||||||||| ||| ||||||||| |||||||| || ||||| || || |
Sbjct: 249 ctgagtacaagaggtccagattgtcaaggaaccggaggactgtaaaccgtccttacggtg 308
Query: 300 gtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaac 359
|||||||||||||| ||||||| ||||||||||||||| | || |||||||||||||| |
Sbjct: 309 gtgttctgtctggtcctgcagtcagggagaggatcatcagggcgtttttggttgaggagc 368
Query: 360 agaagatagtgaagaaggtgttgaagatccaaaagaccaaggataaggcctccaagagct 419
||||||| |||||||||||| |||||||||| ||||||||||| ||| || |||||||||
Sbjct: 369 agaagattgtgaagaaggtgctgaagatccagaagaccaaggaaaagaccaccaagagct 428
Query: 420 a 420
|
Sbjct: 429 a 429
>gb|BQ469439.1|BQ469439 HM04L08r HM Hordeum vulgare subsp. vulgare cDNA clone HM04L08
5-PRIME, mRNA sequence
Length = 535
Score = 391 bits (197), Expect = e-107
Identities = 320/361 (88%)
Strand = Plus / Plus
Query: 60 agatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccaga 119
|||||||||||||||| || ||||| ||||| ||||||||||||||||| ||||||||||
Sbjct: 64 agatggtgcagcggctgacataccgaaagcgccacagctacgccaccaagtcgaaccaga 123
Query: 120 cccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcga 179
| |||||||||||||| || ||||||| |||||||||||||||||||| ||||| ||||
Sbjct: 124 ctcgcgtcgtcaagaccccaggtgggaggcttgtgtaccagtacaccaaaaagcgggcga 183
Query: 180 gcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctg 239
| || || || ||||| || ||||||||||||||||||||||||||||||||||| |||
Sbjct: 184 gtgggccaaaatgcccggttaccgggaagaagatccaaggaattccacacctgaggccta 243
Query: 240 ctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcg 299
||||||||||||||||||| ||| ||||||||| |||||||| || ||||| || || |
Sbjct: 244 ctgagtacaagaggtccagattgtcaaggaaccggaggactgtaaaccgtccttacggtg 303
Query: 300 gtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaac 359
|||||||||||||| ||||||| ||||||||||||||| | || |||||||||||||| |
Sbjct: 304 gtgttctgtctggtcctgcagtcagggagaggatcatcagggcgtttttggttgaggagc 363
Query: 360 agaagatagtgaagaaggtgttgaagatccaaaagaccaaggataaggcctccaagagct 419
||||||| |||||||||||| |||||||||| ||||||||||| ||| || |||||||||
Sbjct: 364 agaagattgtgaagaaggtgctgaagatccagaagaccaaggaaaagaccaccaagagct 423
Query: 420 a 420
|
Sbjct: 424 a 424
>gb|BQ659847.1|BQ659847 HF01O16w HF Hordeum vulgare subsp. vulgare cDNA clone HF01O16
3-PRIME, mRNA sequence
Length = 587
Score = 391 bits (197), Expect = e-107
Identities = 320/361 (88%)
Strand = Plus / Minus
Query: 60 agatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccaga 119
|||||||||||||||| || ||||| ||||| ||||||||||||||||| ||||||||||
Sbjct: 551 agatggtgcagcggctgacataccgaaagcgccacagctacgccaccaagtcgaaccaga 492
Query: 120 cccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcga 179
| |||||||||||||| || ||||||| |||||||||||||||||||| ||||| ||||
Sbjct: 491 ctcgcgtcgtcaagaccccaggtgggaggcttgtgtaccagtacaccaaaaagcgggcga 432
Query: 180 gcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctg 239
| || || || ||||| || ||||||||||||||||||||||||||||||||||| |||
Sbjct: 431 gtgggccaaaatgcccggttaccgggaagaagatccaaggaattccacacctgaggccta 372
Query: 240 ctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcg 299
||||||||||||||||||| ||| ||||||||| |||||||| || ||||| || || |
Sbjct: 371 ctgagtacaagaggtccagattgtcaaggaaccggaggactgtaaaccgtccttacggtg 312
Query: 300 gtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaac 359
|||||||||||||| ||||||| ||||||||||||||| | || |||||||||||||| |
Sbjct: 311 gtgttctgtctggtcctgcagtcagggagaggatcatcagggcgtttttggttgaggagc 252
Query: 360 agaagatagtgaagaaggtgttgaagatccaaaagaccaaggataaggcctccaagagct 419
||||||| |||||||||||| |||||||||| ||||||||||| ||| || |||||||||
Sbjct: 251 agaagattgtgaagaaggtgctgaagatccagaagaccaaggaaaagaccaccaagagct 192
Query: 420 a 420
|
Sbjct: 191 a 191
>gb|BM368093.2|BM368093 EBed01_SQ002_C14_R endosperm, 6 DPA, no treatment, cv Optic, EBed01
Hordeum vulgare subsp. vulgare cDNA clone
EBed01_SQ002_C14 5', mRNA sequence
Length = 510
Score = 391 bits (197), Expect = e-107
Identities = 320/361 (88%)
Strand = Plus / Plus
Query: 60 agatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccaga 119
|||||||||||||||| || ||||| ||||| ||||||||||||||||| ||||||||||
Sbjct: 46 agatggtgcagcggctgacataccgaaagcgccacagctacgccaccaagtcgaaccaga 105
Query: 120 cccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcga 179
| |||||||||||||| || ||||||| |||||||||||||||||||| ||||| ||||
Sbjct: 106 ctcgcgtcgtcaagaccccaggtgggaggcttgtgtaccagtacaccaaaaagcgggcga 165
Query: 180 gcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctg 239
| || || || ||||| || ||||||||||||||||||||||||||||||||||| |||
Sbjct: 166 gtgggccaaaatgcccggttaccgggaagaagatccaaggaattccacacctgaggccta 225
Query: 240 ctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcg 299
||||||||||||||||||| ||| ||||||||| |||||||| || ||||| || || |
Sbjct: 226 ctgagtacaagaggtccagattgtcaaggaaccggaggactgtaaaccgtccttacggtg 285
Query: 300 gtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaac 359
|||||||||||||| ||||||| ||||||||||||||| | || |||||||||||||| |
Sbjct: 286 gtgttctgtctggtcctgcagtcagggagaggatcatcagggcgtttttggttgaggagc 345
Query: 360 agaagatagtgaagaaggtgttgaagatccaaaagaccaaggataaggcctccaagagct 419
||||||| |||||||||||| |||||||||| ||||||||||| ||| || |||||||||
Sbjct: 346 agaagattgtgaagaaggtgctgaagatccagaagaccaaggaaaagaccaccaagagct 405
Query: 420 a 420
|
Sbjct: 406 a 406
>gb|BM097663.2|BM097663 EBem04_SQ002_F16_R embryo, 12 DPA, no treatment, cv Optic, EBem04
Hordeum vulgare subsp. vulgare cDNA clone
EBem04_SQ002_F16 5', mRNA sequence
Length = 543
Score = 391 bits (197), Expect = e-107
Identities = 320/361 (88%)
Strand = Plus / Plus
Query: 60 agatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccaga 119
|||||||||||||||| || ||||| ||||| ||||||||||||||||| ||||||||||
Sbjct: 71 agatggtgcagcggctgacataccgaaagcgccacagctacgccaccaagtcgaaccaga 130
Query: 120 cccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcga 179
| |||||||||||||| || ||||||| |||||||||||||||||||| ||||| ||||
Sbjct: 131 ctcgcgtcgtcaagaccccaggtgggaggcttgtgtaccagtacaccaaaaagcgggcga 190
Query: 180 gcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctg 239
| || || || ||||| || ||||||||||||||||||||||||||||||||||| |||
Sbjct: 191 gtgggccaaaatgcccggttaccgggaagaagatccaaggaattccacacctgaggccta 250
Query: 240 ctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcg 299
||||||||||||||||||| ||| ||||||||| |||||||| || ||||| || || |
Sbjct: 251 ctgagtacaagaggtccagattgtcaaggaaccggaggactgtaaaccgtccttagggtg 310
Query: 300 gtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaac 359
|||||||||||||| ||||||| ||||||||||||||| | || |||||||||||||| |
Sbjct: 311 gtgttctgtctggtcctgcagtcagggagaggatcatcagggcgtttttggttgaggagc 370
Query: 360 agaagatagtgaagaaggtgttgaagatccaaaagaccaaggataaggcctccaagagct 419
||||||| |||||||||||| |||||||||| ||||||||||| ||| || |||||||||
Sbjct: 371 agaagattgtgaagaaggtgctgaagatccagaagaccaaggaaaagaccaccaagagct 430
Query: 420 a 420
|
Sbjct: 431 a 431
>gb|BM097870.2|BM097870 EBem04_SQ002_P09_R embryo, 12 DPA, no treatment, cv Optic, EBem04
Hordeum vulgare subsp. vulgare cDNA clone
EBem04_SQ002_P09 5', mRNA sequence
Length = 537
Score = 391 bits (197), Expect = e-107
Identities = 320/361 (88%)
Strand = Plus / Plus
Query: 60 agatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccaga 119
|||||||||||||||| || ||||| ||||| ||||||||||||||||| ||||||||||
Sbjct: 16 agatggtgcagcggctgacataccgaaagcgccacagctacgccaccaagtcgaaccaga 75
Query: 120 cccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcga 179
| |||||||||||||| || ||||||| |||||||||||||||||||| ||||| ||||
Sbjct: 76 ctcgcgtcgtcaagaccccaggtgggaggcttgtgtaccagtacaccaaaaagcgggcga 135
Query: 180 gcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctg 239
| || || || ||||| || ||||||||||||||||||||||||||||||||||| |||
Sbjct: 136 gtgggccaaaatgcccggttaccgggaagaagatccaaggaattccacacctgaggccta 195
Query: 240 ctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcg 299
||||||||||||||||||| ||| ||||||||| |||||||| || ||||| || || |
Sbjct: 196 ctgagtacaagaggtccagattgtcaaggaaccggaggactgtaaaccgtccttacggtg 255
Query: 300 gtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaac 359
|||||||||||||| ||||||| ||||||||||||||| | || |||||||||||||| |
Sbjct: 256 gtgttctgtctggtcctgcagtcagggagaggatcatcagggcgtttttggttgaggagc 315
Query: 360 agaagatagtgaagaaggtgttgaagatccaaaagaccaaggataaggcctccaagagct 419
||||||| |||||||||||| |||||||||| ||||||||||| ||| || |||||||||
Sbjct: 316 agaagattgtgaagaaggtgctgaagatccagaagaccaaggaaaagaccaccaagagct 375
Query: 420 a 420
|
Sbjct: 376 a 376
>gb|BM377816.2|BM377816 EBem04_SQ004_E08_R embryo, 12 DPA, no treatment, cv Optic, EBem04
Hordeum vulgare subsp. vulgare cDNA clone
EBem04_SQ004_E08 5', mRNA sequence
Length = 519
Score = 391 bits (197), Expect = e-107
Identities = 320/361 (88%)
Strand = Plus / Plus
Query: 60 agatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccaga 119
|||||||||||||||| || ||||| ||||| ||||||||||||||||| ||||||||||
Sbjct: 48 agatggtgcagcggctgacataccgaaagcgccacagctacgccaccaagtcgaaccaga 107
Query: 120 cccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcga 179
| |||||||||||||| || ||||||| |||||||||||||||||||| ||||| ||||
Sbjct: 108 ctcgcgtcgtcaagaccccaggtgggaggcttgtgtaccagtacaccaaaaagcgggcga 167
Query: 180 gcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctg 239
| || || || ||||| || ||||||||||||||||||||||||||||||||||| |||
Sbjct: 168 gtgggccaaaatgcccggttaccgggaagaagatccaaggaattccacacctgaggccta 227
Query: 240 ctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcg 299
||||||||||||||||||| ||| ||||||||| |||||||| || ||||| || || |
Sbjct: 228 ctgagtacaagaggtccagattgtcaaggaaccggaggactgtaaaccgtccttacggtg 287
Query: 300 gtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaac 359
|||||||||||||| ||||||| ||||||||||||||| | || |||||||||||||| |
Sbjct: 288 gtgttctgtctggtcctgcagtcagggagaggatcatcagggcgtttttggttgaggagc 347
Query: 360 agaagatagtgaagaaggtgttgaagatccaaaagaccaaggataaggcctccaagagct 419
||||||| |||||||||||| |||||||||| ||||||||||| ||| || |||||||||
Sbjct: 348 agaagattgtgaagaaggtgctgaagatccagaagaccaaggaaaagaccaccaagagct 407
Query: 420 a 420
|
Sbjct: 408 a 408
>gb|BM375604.2|BM375604 EBem06_SQ003_N15_R embryo, 21 DPA, no treatment, cv Optic, EBem06
Hordeum vulgare subsp. vulgare cDNA clone
EBem06_SQ003_N15 5', mRNA sequence
Length = 487
Score = 391 bits (197), Expect = e-107
Identities = 320/361 (88%)
Strand = Plus / Plus
Query: 60 agatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccaga 119
|||||||||||||||| || ||||| ||||| ||||||||||||||||| ||||||||||
Sbjct: 59 agatggtgcagcggctgacataccgaaagcgccacagctacgccaccaagtcgaaccaga 118
Query: 120 cccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcga 179
| |||||||||||||| || ||||||| |||||||||||||||||||| ||||| ||||
Sbjct: 119 ctcgcgtcgtcaagaccccaggtgggaggcttgtgtaccagtacaccaaaaagcgggcga 178
Query: 180 gcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctg 239
| || || || ||||| || ||||||||||||||||||||||||||||||||||| |||
Sbjct: 179 gtgggccaaaatgcccggttaccgggaagaagatccaaggaattccacacctgaggccta 238
Query: 240 ctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcg 299
||||||||||||||||||| ||| ||||||||| |||||||| || ||||| || || |
Sbjct: 239 ctgagtacaagaggtccagattgtcaaggaaccggaggactgtaaaccgtccttacggtg 298
Query: 300 gtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaac 359
|||||||||||||| ||||||| ||||||||||||||| | || |||||||||||||| |
Sbjct: 299 gtgttctgtctggtcctgcagtcagggagaggatcatcagggcgtttttggttgaggagc 358
Query: 360 agaagatagtgaagaaggtgttgaagatccaaaagaccaaggataaggcctccaagagct 419
||||||| |||||||||||| |||||||||| ||||||||||| ||| || |||||||||
Sbjct: 359 agaagattgtgaagaaggtgctgaagatccagaagaccaaggaaaagaccaccaagagct 418
Query: 420 a 420
|
Sbjct: 419 a 419
>gb|BI779914.2|BI779914 EBem07_SQ001_J04_R embryo, 28 DPA, no treatment, cv Optic, EBem07
Hordeum vulgare subsp. vulgare cDNA clone
EBem07_SQ001_J04 5', mRNA sequence
Length = 496
Score = 391 bits (197), Expect = e-107
Identities = 320/361 (88%)
Strand = Plus / Plus
Query: 60 agatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccaga 119
|||||||||||||||| || ||||| ||||| ||||||||||||||||| ||||||||||
Sbjct: 26 agatggtgcagcggctgacataccgaaagcgccacagctacgccaccaagtcgaaccaga 85
Query: 120 cccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcga 179
| |||||||||||||| || ||||||| |||||||||||||||||||| ||||| ||||
Sbjct: 86 ctcgcgtcgtcaagaccccaggtgggaggcttgtgtaccagtacaccaaaaagcgggcga 145
Query: 180 gcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctg 239
| || || || ||||| || ||||||||||||||||||||||||||||||||||| |||
Sbjct: 146 gtgggccaaaatgcccggttaccgggaagaagatccaaggaattccacacctgaggccta 205
Query: 240 ctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcg 299
||||||||||||||||||| ||| ||||||||| |||||||| || ||||| || || |
Sbjct: 206 ctgagtacaagaggtccagattgtcaaggaaccggaggactgtaaaccgtccttacggtg 265
Query: 300 gtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaac 359
|||||||||||||| ||||||| ||||||||||||||| | || |||||||||||||| |
Sbjct: 266 gtgttctgtctggtcctgcagtcagggagaggatcatcagggcgtttttggttgaggagc 325
Query: 360 agaagatagtgaagaaggtgttgaagatccaaaagaccaaggataaggcctccaagagct 419
||||||| |||||||||||| |||||||||| ||||||||||| ||| || |||||||||
Sbjct: 326 agaagattgtgaagaaggtgctgaagatccagaagaccaaggaaaagaccaccaagagct 385
Query: 420 a 420
|
Sbjct: 386 a 386
>gb|BM369468.2|BM369468 EBem07_SQ003_K20_R embryo, 28 DPA, no treatment, cv Optic, EBem07
Hordeum vulgare subsp. vulgare cDNA clone
EBem07_SQ003_K20 5', mRNA sequence
Length = 520
Score = 391 bits (197), Expect = e-107
Identities = 320/361 (88%)
Strand = Plus / Plus
Query: 60 agatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccaga 119
|||||||||||||||| || ||||| ||||| ||||||||||||||||| ||||||||||
Sbjct: 49 agatggtgcagcggctgacataccgaaagcgccacagctacgccaccaagtcgaaccaga 108
Query: 120 cccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcga 179
| |||||||||||||| || ||||||| |||||||||||||||||||| ||||| ||||
Sbjct: 109 ctcgcgtcgtcaagaccccaggtgggaggcttgtgtaccagtacaccaaaaagcgggcga 168
Query: 180 gcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctg 239
| || || || ||||| || ||||||||||||||||||||||||||||||||||| |||
Sbjct: 169 gtgggccaaaatgcccggttaccgggaagaagatccaaggaattccacacctgaggccta 228
Query: 240 ctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcg 299
||||||||||||||||||| ||| ||||||||| |||||||| || ||||| || || |
Sbjct: 229 ctgagtacaagaggtccagattgtcaaggaaccggaggactgtaaaccgtccttacggtg 288
Query: 300 gtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaac 359
|||||||||||||| ||||||| ||||||||||||||| | || |||||||||||||| |
Sbjct: 289 gtgttctgtctggtcctgcagtcagggagaggatcatcagggcgtttttggttgaggagc 348
Query: 360 agaagatagtgaagaaggtgttgaagatccaaaagaccaaggataaggcctccaagagct 419
||||||| |||||||||||| |||||||||| ||||||||||| ||| || |||||||||
Sbjct: 349 agaagattgtgaagaaggtgctgaagatccagaagaccaaggaaaagaccaccaagagct 408
Query: 420 a 420
|
Sbjct: 409 a 409
>gb|BM098698.2|BM098698 EBem08_SQ003_N05_R embryo, 40 DPA, no treatment, cv Optic, EBem08
Hordeum vulgare subsp. vulgare cDNA clone
EBem08_SQ003_N05 5', mRNA sequence
Length = 497
Score = 391 bits (197), Expect = e-107
Identities = 320/361 (88%)
Strand = Plus / Plus
Query: 60 agatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccaga 119
|||||||||||||||| || ||||| ||||| ||||||||||||||||| ||||||||||
Sbjct: 26 agatggtgcagcggctgacataccgaaagcgccacagctacgccaccaagtcgaaccaga 85
Query: 120 cccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcga 179
| |||||||||||||| || ||||||| |||||||||||||||||||| ||||| ||||
Sbjct: 86 ctcgcgtcgtcaagaccccaggtgggaggcttgtgtaccagtacaccaaaaagcgggcga 145
Query: 180 gcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctg 239
| || || || ||||| || ||||||||||||||||||||||||||||||||||| |||
Sbjct: 146 gtgggccaaaatgcccggttaccgggaagaagatccaaggaattccacacctgaggccta 205
Query: 240 ctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcg 299
||||||||||||||||||| ||| ||||||||| |||||||| || ||||| || || |
Sbjct: 206 ctgagtacaagaggtccagattgtcaaggaaccggaggactgtaaaccgtccttacggtg 265
Query: 300 gtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaac 359
|||||||||||||| ||||||| ||||||||||||||| | || |||||||||||||| |
Sbjct: 266 gtgttctgtctggtcctgcagtcagggagaggatcatcagggcgtttttggttgaggagc 325
Query: 360 agaagatagtgaagaaggtgttgaagatccaaaagaccaaggataaggcctccaagagct 419
||||||| |||||||||||| |||||||||| ||||||||||| ||| || |||||||||
Sbjct: 326 agaagattgtgaagaaggtgctgaagatccagaagaccaaggaaaagaccaccaagagct 385
Query: 420 a 420
|
Sbjct: 386 a 386
>gb|BM370257.2|BM370257 EBro08_SQ003_K05_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ003_K05 5', mRNA sequence
Length = 615
Score = 391 bits (197), Expect = e-107
Identities = 320/361 (88%)
Strand = Plus / Plus
Query: 60 agatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccaga 119
|||||||||||||||| || ||||| ||||| ||||||||||||||||| ||||||||||
Sbjct: 66 agatggtgcagcggctgacataccgaaagcgccacagctacgccaccaagtcgaaccaga 125
Query: 120 cccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcga 179
| |||||||||||||| || ||||||| |||||||||||||||||||| ||||| ||||
Sbjct: 126 ctcgcgtcgtcaagaccccaggtgggaggcttgtgtaccagtacaccaaaaagcgggcga 185
Query: 180 gcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctg 239
| || || || ||||| || ||||||||||||||||||||||||||||||||||| |||
Sbjct: 186 gtgggccaaaatgcccggttaccgggaagaagatccaaggaattccacacctgaggccta 245
Query: 240 ctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcg 299
||||||||||||||||||| ||| ||||||||| |||||||| || ||||| || || |
Sbjct: 246 ctgagtacaagaggtccagattgtcaaggaaccggaggactgtaaaccgtccttacggtg 305
Query: 300 gtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaac 359
|||||||||||||| ||||||| ||||||||||||||| | || |||||||||||||| |
Sbjct: 306 gtgttctgtctggtcctgcagtcagggagaggatcatcagggcgtttttggttgaggagc 365
Query: 360 agaagatagtgaagaaggtgttgaagatccaaaagaccaaggataaggcctccaagagct 419
||||||| |||||||||||| |||||||||| ||||||||||| ||| || |||||||||
Sbjct: 366 agaagattgtgaagaaggtgctgaagatccagaagaccaaggaaaagaccaccaagagct 425
Query: 420 a 420
|
Sbjct: 426 a 426
>gb|BQ765093.1|BQ765093 EBca01_SQ005_D20_R carpel, pre-anthesis, no treatment, cv Optic,
EBca01 Hordeum vulgare subsp. vulgare cDNA clone
EBca01_SQ005_D20 5', mRNA sequence
Length = 616
Score = 391 bits (197), Expect = e-107
Identities = 320/361 (88%)
Strand = Plus / Plus
Query: 60 agatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccaga 119
|||||||||||||||| || ||||| ||||| ||||||||||||||||| ||||||||||
Sbjct: 49 agatggtgcagcggctgacataccgaaagcgccacagctacgccaccaagtcgaaccaga 108
Query: 120 cccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcga 179
| |||||||||||||| || ||||||| |||||||||||||||||||| ||||| ||||
Sbjct: 109 ctcgcgtcgtcaagaccccaggtgggaggcttgtgtaccagtacaccaaaaagcgggcga 168
Query: 180 gcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctg 239
| || || || ||||| || ||||||||||||||||||||||||||||||||||| |||
Sbjct: 169 gtgggccaaaatgcccggttaccgggaagaagatccaaggaattccacacctgaggccta 228
Query: 240 ctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcg 299
||||||||||||||||||| ||| ||||||||| |||||||| || ||||| || || |
Sbjct: 229 ctgagtacaagaggtccagattgtcaaggaaccggaggactgtaaaccgtccttacggtg 288
Query: 300 gtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaac 359
|||||||||||||| ||||||| ||||||||||||||| | || |||||||||||||| |
Sbjct: 289 gtgttctgtctggtcctgcagtcagggagaggatcatcagggcgtttttggttgaggagc 348
Query: 360 agaagatagtgaagaaggtgttgaagatccaaaagaccaaggataaggcctccaagagct 419
||||||| |||||||||||| |||||||||| ||||||||||| ||| || |||||||||
Sbjct: 349 agaagattgtgaagaaggtgctgaagatccagaagaccaaggaaaagaccaccaagagct 408
Query: 420 a 420
|
Sbjct: 409 a 409
>gb|BQ766940.1|BQ766940 EBro08_SQ007_E14_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ007_E14 5', mRNA sequence
Length = 585
Score = 391 bits (197), Expect = e-107
Identities = 320/361 (88%)
Strand = Plus / Plus
Query: 60 agatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccaga 119
|||||||||||||||| || ||||| ||||| ||||||||||||||||| ||||||||||
Sbjct: 37 agatggtgcagcggctgacataccgaaagcgccacagctacgccaccaagtcgaaccaga 96
Query: 120 cccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcga 179
| |||||||||||||| || ||||||| |||||||||||||||||||| ||||| ||||
Sbjct: 97 ctcgcgtcgtcaagaccccaggtgggaggcttgtgtaccagtacaccaaaaagcgggcga 156
Query: 180 gcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctg 239
| || || || ||||| || ||||||||||||||||||||||||||||||||||| |||
Sbjct: 157 gtgggccaaaatgcccggttaccgggaagaagatccaaggaattccacacctgaggccta 216
Query: 240 ctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcg 299
||||||||||||||||||| ||| ||||||||| |||||||| || ||||| || || |
Sbjct: 217 ctgagtacaagaggtccagattgtcaaggaaccggaggactgtaaaccgtccttacggtg 276
Query: 300 gtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaac 359
|||||||||||||| ||||||| ||||||||||||||| | || |||||||||||||| |
Sbjct: 277 gtgttctgtctggtcctgcagtcagggagaggatcatcagggcgtttttggttgaggagc 336
Query: 360 agaagatagtgaagaaggtgttgaagatccaaaagaccaaggataaggcctccaagagct 419
||||||| |||||||||||| |||||||||| ||||||||||| ||| || |||||||||
Sbjct: 337 agaagattgtgaagaaggtgctgaagatccagaagaccaaggaaaagaccaccaagagct 396
Query: 420 a 420
|
Sbjct: 397 a 397
>gb|BU975008.1|BU975008 HB29M24r BC Hordeum vulgare subsp. vulgare cDNA clone HB29M24
5-PRIME, mRNA sequence
Length = 550
Score = 391 bits (197), Expect = e-107
Identities = 320/361 (88%)
Strand = Plus / Plus
Query: 60 agatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccaga 119
|||||||||||||||| || ||||| ||||| ||||||||||||||||| ||||||||||
Sbjct: 45 agatggtgcagcggctgacataccgaaagcgccacagctacgccaccaagtcgaaccaga 104
Query: 120 cccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcga 179
| |||||||||||||| || ||||||| |||||||||||||||||||| ||||| ||||
Sbjct: 105 ctcgcgtcgtcaagaccccaggtgggaggcttgtgtaccagtacaccaaaaagcgggcga 164
Query: 180 gcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctg 239
| || || || ||||| || ||||||||||||||||||||||||||||||||||| |||
Sbjct: 165 gtgggccaaaatgcccggttaccgggaagaagatccaaggaattccacacctgaggccta 224
Query: 240 ctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcg 299
||||||||||||||||||| ||| ||||||||| |||||||| || ||||| || || |
Sbjct: 225 ctgagtacaagaggtccagattgtcaaggaaccggaggactgtaaaccgtccttacggtg 284
Query: 300 gtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaac 359
|||||||||||||| ||||||| ||||||||||||||| | || |||||||||||||| |
Sbjct: 285 gtgttctgtctggtcctgcagtcagggagaggatcatcagggcgtttttggttgaggagc 344
Query: 360 agaagatagtgaagaaggtgttgaagatccaaaagaccaaggataaggcctccaagagct 419
||||||| |||||||||||| |||||||||| ||||||||||| ||| || |||||||||
Sbjct: 345 agaagattgtgaagaaggtgctgaagatccagaagaccaaggaaaagaccaccaagagct 404
Query: 420 a 420
|
Sbjct: 405 a 405
>gb|BU975197.1|BU975197 HB30G05r BC Hordeum vulgare subsp. vulgare cDNA clone HB30G05
5-PRIME, mRNA sequence
Length = 552
Score = 391 bits (197), Expect = e-107
Identities = 320/361 (88%)
Strand = Plus / Plus
Query: 60 agatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccaga 119
|||||||||||||||| || ||||| ||||| ||||||||||||||||| ||||||||||
Sbjct: 45 agatggtgcagcggctgacataccgaaagcgccacagctacgccaccaagtcgaaccaga 104
Query: 120 cccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcga 179
| |||||||||||||| || ||||||| |||||||||||||||||||| ||||| ||||
Sbjct: 105 ctcgcgtcgtcaagaccccaggtgggaggcttgtgtaccagtacaccaaaaagcgggcga 164
Query: 180 gcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctg 239
| || || || ||||| || ||||||||||||||||||||||||||||||||||| |||
Sbjct: 165 gtgggccaaaatgcccggttaccgggaagaagatccaaggaattccacacctgaggccta 224
Query: 240 ctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcg 299
||||||||||||||||||| ||| ||||||||| |||||||| || ||||| || || |
Sbjct: 225 ctgagtacaagaggtccagattgtcaaggaaccggaggactgtaaaccgtccttacggtg 284
Query: 300 gtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaac 359
|||||||||||||| ||||||| ||||||||||||||| | || |||||||||||||| |
Sbjct: 285 gtgttctgtctggtcctgcagtcagggagaggatcatcagggcgtttttggttgaggagc 344
Query: 360 agaagatagtgaagaaggtgttgaagatccaaaagaccaaggataaggcctccaagagct 419
||||||| |||||||||||| |||||||||| ||||||||||| ||| || |||||||||
Sbjct: 345 agaagattgtgaagaaggtgctgaagatccagaagaccaaggaaaagaccaccaagagct 404
Query: 420 a 420
|
Sbjct: 405 a 405
>gb|BU979482.1|BU979482 HA16E22r HA Hordeum vulgare subsp. vulgare cDNA clone HA16E22
5-PRIME, mRNA sequence
Length = 534
Score = 391 bits (197), Expect = e-107
Identities = 320/361 (88%)
Strand = Plus / Plus
Query: 60 agatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccaga 119
|||||||||||||||| || ||||| ||||| ||||||||||||||||| ||||||||||
Sbjct: 63 agatggtgcagcggctgacataccgaaagcgccacagctacgccaccaagtcgaaccaga 122
Query: 120 cccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcga 179
| |||||||||||||| || ||||||| |||||||||||||||||||| ||||| ||||
Sbjct: 123 ctcgcgtcgtcaagaccccaggtgggaggcttgtgtaccagtacaccaaaaagcgggcga 182
Query: 180 gcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctg 239
| || || || ||||| || ||||||||||||||||||||||||||||||||||| |||
Sbjct: 183 gtgggccaaaatgcccggttaccgggaagaagatccaaggaattccacacctgaggccta 242
Query: 240 ctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcg 299
||||||||||||||||||| ||| ||||||||| |||||||| || ||||| || || |
Sbjct: 243 ctgagtacaagaggtccagattgtcaaggaaccggaggactgtaaaccgtccttacggtg 302
Query: 300 gtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaac 359
|||||||||||||| ||||||| ||||||||||||||| | || |||||||||||||| |
Sbjct: 303 gtgttctgtctggtcctgcagtcagggagaggatcatcagggcgtttttggttgaggagc 362
Query: 360 agaagatagtgaagaaggtgttgaagatccaaaagaccaaggataaggcctccaagagct 419
||||||| |||||||||||| |||||||||| ||||||||||| ||| || |||||||||
Sbjct: 363 agaagattgtgaagaaggtgctgaagatccagaagaccaaggaaaagaccaccaagagct 422
Query: 420 a 420
|
Sbjct: 423 a 423
>gb|BU981600.1|BU981600 HA24B13r HA Hordeum vulgare subsp. vulgare cDNA clone HA24B13
5-PRIME, mRNA sequence
Length = 543
Score = 391 bits (197), Expect = e-107
Identities = 320/361 (88%)
Strand = Plus / Plus
Query: 60 agatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccaga 119
|||||||||||||||| || ||||| ||||| ||||||||||||||||| ||||||||||
Sbjct: 73 agatggtgcagcggctgacataccgaaagcgccacagctacgccaccaagtcgaaccaga 132
Query: 120 cccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcga 179
| |||||||||||||| || ||||||| |||||||||||||||||||| ||||| ||||
Sbjct: 133 ctcgcgtcgtcaagaccccaggtgggaggcttgtgtaccagtacaccaaaaagcgggcga 192
Query: 180 gcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctg 239
| || || || ||||| || ||||||||||||||||||||||||||||||||||| |||
Sbjct: 193 gtgggccaaaatgcccggttaccgggaagaagatccaaggaattccacacctgaggccta 252
Query: 240 ctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcg 299
||||||||||||||||||| ||| ||||||||| |||||||| || ||||| || || |
Sbjct: 253 ctgagtacaagaggtccagattgtcaaggaaccggaggactgtaaaccgtccttacggtg 312
Query: 300 gtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaac 359
|||||||||||||| ||||||| ||||||||||||||| | || |||||||||||||| |
Sbjct: 313 gtgttctgtctggtcctgcagtcagggagaggatcatcagggcgtttttggttgaggagc 372
Query: 360 agaagatagtgaagaaggtgttgaagatccaaaagaccaaggataaggcctccaagagct 419
||||||| |||||||||||| |||||||||| ||||||||||| ||| || |||||||||
Sbjct: 373 agaagattgtgaagaaggtgctgaagatccagaagaccaaggaaaagaccaccaagagct 432
Query: 420 a 420
|
Sbjct: 433 a 433
>gb|BU984631.1|BU984631 HF04I03r HF Hordeum vulgare subsp. vulgare cDNA clone HF04I03
5-PRIME, mRNA sequence
Length = 619
Score = 391 bits (197), Expect = e-107
Identities = 320/361 (88%)
Strand = Plus / Plus
Query: 60 agatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccaga 119
|||||||||||||||| || ||||| ||||| ||||||||||||||||| ||||||||||
Sbjct: 53 agatggtgcagcggctgacataccgaaagcgccacagctacgccaccaagtcgaaccaga 112
Query: 120 cccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcga 179
| |||||||||||||| || ||||||| |||||||||||||||||||| ||||| ||||
Sbjct: 113 ctcgcgtcgtcaagaccccaggtgggaggcttgtgtaccagtacaccaaaaagcgggcga 172
Query: 180 gcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctg 239
| || || || ||||| || ||||||||||||||||||||||||||||||||||| |||
Sbjct: 173 gtgggccaaaatgcccggttaccgggaagaagatccaaggaattccacacctgaggccta 232
Query: 240 ctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcg 299
||||||||||||||||||| ||| ||||||||| |||||||| || ||||| || || |
Sbjct: 233 ctgagtacaagaggtccagattgtcaaggaaccggaggactgtaaaccgtccttacggtg 292
Query: 300 gtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaac 359
|||||||||||||| ||||||| ||||||||||||||| | || |||||||||||||| |
Sbjct: 293 gtgttctgtctggtcctgcagtcagggagaggatcatcagggcgtttttggttgaggagc 352
Query: 360 agaagatagtgaagaaggtgttgaagatccaaaagaccaaggataaggcctccaagagct 419
||||||| |||||||||||| |||||||||| ||||||||||| ||| || |||||||||
Sbjct: 353 agaagattgtgaagaaggtgctgaagatccagaagaccaaggaaaagaccaccaagagct 412
Query: 420 a 420
|
Sbjct: 413 a 413
>gb|BU988981.1|BU988981 HF19G03r HF Hordeum vulgare subsp. vulgare cDNA clone HF19G03
5-PRIME, mRNA sequence
Length = 547
Score = 391 bits (197), Expect = e-107
Identities = 320/361 (88%)
Strand = Plus / Plus
Query: 60 agatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccaga 119
|||||||||||||||| || ||||| ||||| ||||||||||||||||| ||||||||||
Sbjct: 76 agatggtgcagcggctgacataccgaaagcgccacagctacgccaccaagtcgaaccaga 135
Query: 120 cccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcga 179
| |||||||||||||| || ||||||| |||||||||||||||||||| ||||| ||||
Sbjct: 136 ctcgcgtcgtcaagaccccaggtgggaggcttgtgtaccagtacaccaaaaagcgggcga 195
Query: 180 gcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctg 239
| || || || ||||| || ||||||||||||||||||||||||||||||||||| |||
Sbjct: 196 gtgggccaaaatgcccggttaccgggaagaagatccaaggaattccacacctgaggccta 255
Query: 240 ctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcg 299
||||||||||||||||||| ||| ||||||||| |||||||| || ||||| || || |
Sbjct: 256 ctgagtacaagaggtccagattgtcaaggaaccggaggactgtaaaccgtccttacggtg 315
Query: 300 gtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaac 359
|||||||||||||| ||||||| ||||||||||||||| | || |||||||||||||| |
Sbjct: 316 gtgttctgtctggtcctgcagtcagggagaggatcatcagggcgtttttggttgaggagc 375
Query: 360 agaagatagtgaagaaggtgttgaagatccaaaagaccaaggataaggcctccaagagct 419
||||||| |||||||||||| |||||||||| ||||||||||| ||| || |||||||||
Sbjct: 376 agaagattgtgaagaaggtgctgaagatccagaagaccaaggaaaagaccaccaagagct 435
Query: 420 a 420
|
Sbjct: 436 a 436
>gb|CA030739.1|CA030739 HX07P18r HX Hordeum vulgare subsp. vulgare cDNA clone HX07P18
5-PRIME, mRNA sequence
Length = 581
Score = 391 bits (197), Expect = e-107
Identities = 320/361 (88%)
Strand = Plus / Plus
Query: 60 agatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccaga 119
|||||||||||||||| || ||||| ||||| ||||||||||||||||| ||||||||||
Sbjct: 31 agatggtgcagcggctgacataccgaaagcgccacagctacgccaccaagtcgaaccaga 90
Query: 120 cccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcga 179
| |||||||||||||| || ||||||| |||||||||||||||||||| ||||| ||||
Sbjct: 91 ctcgcgtcgtcaagaccccaggtgggaggcttgtgtaccagtacaccaaaaagcgggcga 150
Query: 180 gcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctg 239
| || || || ||||| || ||||||||||||||||||||||||||||||||||| |||
Sbjct: 151 gtgggccaaaatgcccggttaccgggaagaagatccaaggaattccacacctgaggccta 210
Query: 240 ctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcg 299
||||||||||||||||||| ||| ||||||||| |||||||| || ||||| || || |
Sbjct: 211 ctgagtacaagaggtccagattgtcaaggaaccggaggactgtaaaccgtccttacggtg 270
Query: 300 gtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaac 359
|||||||||||||| ||||||| ||||||||||||||| | || |||||||||||||| |
Sbjct: 271 gtgttctgtctggtcctgcagtcagggagaggatcatcagggcgtttttggttgaggagc 330
Query: 360 agaagatagtgaagaaggtgttgaagatccaaaagaccaaggataaggcctccaagagct 419
||||||| |||||||||||| |||||||||| ||||||||||| ||| || |||||||||
Sbjct: 331 agaagattgtgaagaaggtgctgaagatccagaagaccaaggaaaagaccaccaagagct 390
Query: 420 a 420
|
Sbjct: 391 a 391
>gb|CA031776.1|CA031776 HX11B17r HX Hordeum vulgare subsp. vulgare cDNA clone HX11B17
5-PRIME, mRNA sequence
Length = 559
Score = 391 bits (197), Expect = e-107
Identities = 320/361 (88%)
Strand = Plus / Plus
Query: 60 agatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccaga 119
|||||||||||||||| || ||||| ||||| ||||||||||||||||| ||||||||||
Sbjct: 69 agatggtgcagcggctgacataccgaaagcgccacagctacgccaccaagtcgaaccaga 128
Query: 120 cccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcga 179
| |||||||||||||| || ||||||| |||||||||||||||||||| ||||| ||||
Sbjct: 129 ctcgcgtcgtcaagaccccaggtgggaggcttgtgtaccagtacaccaaaaagcgggcga 188
Query: 180 gcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctg 239
| || || || ||||| || ||||||||||||||||||||||||||||||||||| |||
Sbjct: 189 gtgggccaaaatgcccggttaccgggaagaagatccaaggaattccacacctgaggccta 248
Query: 240 ctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcg 299
||||||||||||||||||| ||| ||||||||| |||||||| || ||||| || || |
Sbjct: 249 ctgagtacaagaggtccagattgtcaaggaaccggaggactgtaaaccgtccttacggtg 308
Query: 300 gtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaac 359
|||||||||||||| ||||||| ||||||||||||||| | || |||||||||||||| |
Sbjct: 309 gtgttctgtctggtcctgcagtcagggagaggatcatcagggcgtttttggttgaggagc 368
Query: 360 agaagatagtgaagaaggtgttgaagatccaaaagaccaaggataaggcctccaagagct 419
||||||| |||||||||||| |||||||||| ||||||||||| ||| || |||||||||
Sbjct: 369 agaagattgtgaagaaggtgctgaagatccagaagaccaaggaaaagaccaccaagagct 428
Query: 420 a 420
|
Sbjct: 429 a 429
>gb|CB875332.1|CB875332 HX07P18w HX Hordeum vulgare subsp. vulgare cDNA clone HX07P18
3-PRIME, mRNA sequence
Length = 576
Score = 391 bits (197), Expect = e-107
Identities = 320/361 (88%)
Strand = Plus / Minus
Query: 60 agatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccaga 119
|||||||||||||||| || ||||| ||||| ||||||||||||||||| ||||||||||
Sbjct: 551 agatggtgcagcggctgacataccgaaagcgccacagctacgccaccaagtcgaaccaga 492
Query: 120 cccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcga 179
| |||||||||||||| || ||||||| |||||||||||||||||||| ||||| ||||
Sbjct: 491 ctcgcgtcgtcaagaccccaggtgggaggcttgtgtaccagtacaccaaaaagcgggcga 432
Query: 180 gcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctg 239
| || || || ||||| || ||||||||||||||||||||||||||||||||||| |||
Sbjct: 431 gtgggccaaaatgcccggttaccgggaagaagatccaaggaattccacacctgaggccta 372
Query: 240 ctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcg 299
||||||||||||||||||| ||| ||||||||| |||||||| || ||||| || || |
Sbjct: 371 ctgagtacaagaggtccagattgtcaaggaaccggaggactgtaaaccgtccttacggtg 312
Query: 300 gtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaac 359
|||||||||||||| ||||||| ||||||||||||||| | || |||||||||||||| |
Sbjct: 311 gtgttctgtctggtcctgcagtcagggagaggatcatcagggcgtttttggttgaggagc 252
Query: 360 agaagatagtgaagaaggtgttgaagatccaaaagaccaaggataaggcctccaagagct 419
||||||| |||||||||||| |||||||||| ||||||||||| ||| || |||||||||
Sbjct: 251 agaagattgtgaagaaggtgctgaagatccagaagaccaaggaaaagaccaccaagagct 192
Query: 420 a 420
|
Sbjct: 191 a 191
>gb|CK124087.1|CK124087 BES1824107a18 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010A187 5-PRIME, mRNA sequence
Length = 641
Score = 391 bits (197), Expect = e-107
Identities = 320/361 (88%)
Strand = Plus / Plus
Query: 60 agatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccaga 119
|||||||||||||||| || ||||| ||||| ||||||||||||||||| ||||||||||
Sbjct: 59 agatggtgcagcggctgacataccgaaagcgccacagctacgccaccaagtcgaaccaga 118
Query: 120 cccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcga 179
| |||||||||||||| || ||||||| |||||||||||||||||||| ||||| ||||
Sbjct: 119 ctcgcgtcgtcaagaccccaggtgggaggcttgtgtaccagtacaccaaaaagcgggcga 178
Query: 180 gcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctg 239
| || || || ||||| || ||||||||||||||||||||||||||||||||||| |||
Sbjct: 179 gtgggccaaaatgcccggttaccgggaagaagatccaaggaattccacacctgaggccta 238
Query: 240 ctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcg 299
||||||||||||||||||| ||| ||||||||| |||||||| || ||||| || || |
Sbjct: 239 ctgagtacaagaggtccagattgtcaaggaaccggaggactgtaaaccgtccttacggtg 298
Query: 300 gtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaac 359
|||||||||||||| ||||||| ||||||||||||||| | || |||||||||||||| |
Sbjct: 299 gtgttctgtctggtcctgcagtcagggagaggatcatcagggcgtttttggttgaggagc 358
Query: 360 agaagatagtgaagaaggtgttgaagatccaaaagaccaaggataaggcctccaagagct 419
||||||| |||||||||||| |||||||||| ||||||||||| ||| || |||||||||
Sbjct: 359 agaagattgtgaagaaggtgctgaagatccagaagaccaaggaaaagaccaccaagagct 418
Query: 420 a 420
|
Sbjct: 419 a 419
>gb|CK124520.1|CK124520 BES1824109g23 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010G239 5-PRIME, mRNA sequence
Length = 540
Score = 391 bits (197), Expect = e-107
Identities = 320/361 (88%)
Strand = Plus / Plus
Query: 60 agatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccaga 119
|||||||||||||||| || ||||| ||||| ||||||||||||||||| ||||||||||
Sbjct: 62 agatggtgcagcggctgacataccgaaagcgccacagctacgccaccaagtcgaaccaga 121
Query: 120 cccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcga 179
| |||||||||||||| || ||||||| |||||||||||||||||||| ||||| ||||
Sbjct: 122 ctcgcgtcgtcaagaccccaggtgggaggcttgtgtaccagtacaccaaaaagcgggcga 181
Query: 180 gcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctg 239
| || || || ||||| || ||||||||||||||||||||||||||||||||||| |||
Sbjct: 182 gtgggccaaaatgcccggttaccgggaagaagatccaaggaattccacacctgaggccta 241
Query: 240 ctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcg 299
||||||||||||||||||| ||| ||||||||| |||||||| || ||||| || || |
Sbjct: 242 ctgagtacaagaggtccagattgtcaaggaaccggaggactgtaaaccgtccttacggtg 301
Query: 300 gtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaac 359
|||||||||||||| ||||||| ||||||||||||||| | || |||||||||||||| |
Sbjct: 302 gtgttctgtctggtcctgcagtcagggagaggatcatcagggcgtttttggttgaggagc 361
Query: 360 agaagatagtgaagaaggtgttgaagatccaaaagaccaaggataaggcctccaagagct 419
||||||| |||||||||||| |||||||||| ||||||||||| ||| || |||||||||
Sbjct: 362 agaagattgtgaagaaggtgctgaagatccagaagaccaaggaaaagaccaccaagagct 421
Query: 420 a 420
|
Sbjct: 422 a 422
>gb|CK125309.1|CK125309 BES1824107k12 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010K127 5-PRIME, mRNA sequence
Length = 653
Score = 391 bits (197), Expect = e-107
Identities = 320/361 (88%)
Strand = Plus / Plus
Query: 60 agatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccaga 119
|||||||||||||||| || ||||| ||||| ||||||||||||||||| ||||||||||
Sbjct: 62 agatggtgcagcggctgacataccgaaagcgccacagctacgccaccaagtcgaaccaga 121
Query: 120 cccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcga 179
| |||||||||||||| || ||||||| |||||||||||||||||||| ||||| ||||
Sbjct: 122 ctcgcgtcgtcaagaccccaggtgggaggcttgtgtaccagtacaccaaaaagcgggcga 181
Query: 180 gcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctg 239
| || || || ||||| || ||||||||||||||||||||||||||||||||||| |||
Sbjct: 182 gtgggccaaaatgcccggttaccgggaagaagatccaaggaattccacacctgaggccta 241
Query: 240 ctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcg 299
||||||||||||||||||| ||| ||||||||| |||||||| || ||||| || || |
Sbjct: 242 ctgagtacaagaggtccagattgtcaaggaaccggaggactgtaaaccgtccttacggtg 301
Query: 300 gtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaac 359
|||||||||||||| ||||||| ||||||||||||||| | || |||||||||||||| |
Sbjct: 302 gtgttctgtctggtcctgcagtcagggagaggatcatcagggcgtttttggttgaggagc 361
Query: 360 agaagatagtgaagaaggtgttgaagatccaaaagaccaaggataaggcctccaagagct 419
||||||| |||||||||||| |||||||||| ||||||||||| ||| || |||||||||
Sbjct: 362 agaagattgtgaagaaggtgctgaagatccagaagaccaaggaaaagaccaccaagagct 421
Query: 420 a 420
|
Sbjct: 422 a 422
>gb|BM100540.2|BM100540 EBma01_SQ005_I07_R maternal, 4 DPA, no treatment, cv Optic, EBma01
Hordeum vulgare subsp. vulgare cDNA clone
EBma01_SQ005_I07 5', mRNA sequence
Length = 504
Score = 385 bits (194), Expect = e-105
Identities = 319/361 (88%)
Strand = Plus / Plus
Query: 60 agatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccaga 119
|||||||||||||||| || ||||| ||||| ||||||||||||||||| ||||||||||
Sbjct: 32 agatggtgcagcggctgacataccgaaagcgccacagctacgccaccaagtcgaaccaga 91
Query: 120 cccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcga 179
| |||||||||||||| || ||||||| |||||||||||||||||||| ||||| ||||
Sbjct: 92 ctcgcgtcgtcaagaccccaggtgggaggcttgtgtaccagtacaccaaaaagcgggcga 151
Query: 180 gcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctg 239
| || || || ||||| || ||||||||||||||||||||||||||||||||||| |||
Sbjct: 152 gtgggccaaaatgcccggttaccgggaagaagatccaaggaattccacacctgaggccta 211
Query: 240 ctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcg 299
||||||||||||||||||| ||| ||||||||| |||||||| || ||||| || || |
Sbjct: 212 ctgagtacaagaggtccagattgtcaaggaaccggaggactgtaaaccgtccttacggtg 271
Query: 300 gtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaac 359
|||||||||||||| ||||||| ||||||||||||||| || |||||||||||||| |
Sbjct: 272 gtgttctgtctggtcctgcagtcagggagaggatcatcanggcgtttttggttgaggagc 331
Query: 360 agaagatagtgaagaaggtgttgaagatccaaaagaccaaggataaggcctccaagagct 419
||||||| |||||||||||| |||||||||| ||||||||||| ||| || |||||||||
Sbjct: 332 agaagattgtgaagaaggtgctgaagatccagaagaccaaggaaaagaccaccaagagct 391
Query: 420 a 420
|
Sbjct: 392 a 392
>gb|CB876380.1|CB876380 HX11B17w HX Hordeum vulgare subsp. vulgare cDNA clone HX11B17
3-PRIME, mRNA sequence
Length = 577
Score = 385 bits (194), Expect = e-105
Identities = 319/361 (88%)
Strand = Plus / Minus
Query: 60 agatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccaga 119
|||||||||||||||| || ||||| ||||| ||||| ||||||||||| ||||||||||
Sbjct: 490 agatggtgcagcggctgacataccgaaagcgccacagntacgccaccaagtcgaaccaga 431
Query: 120 cccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcga 179
| |||||||||||||| || ||||||| |||||||||||||||||||| ||||| ||||
Sbjct: 430 ctcgcgtcgtcaagaccccaggtgggaggcttgtgtaccagtacaccaaaaagcgggcga 371
Query: 180 gcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctg 239
| || || || ||||| || ||||||||||||||||||||||||||||||||||| |||
Sbjct: 370 gtgggccaaaatgcccggttaccgggaagaagatccaaggaattccacacctgaggccta 311
Query: 240 ctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcg 299
||||||||||||||||||| ||| ||||||||| |||||||| || ||||| || || |
Sbjct: 310 ctgagtacaagaggtccagattgtcaaggaaccggaggactgtaaaccgtccttacggtg 251
Query: 300 gtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaac 359
|||||||||||||| ||||||| ||||||||||||||| | || |||||||||||||| |
Sbjct: 250 gtgttctgtctggtcctgcagtcagggagaggatcatcagggcgtttttggttgaggagc 191
Query: 360 agaagatagtgaagaaggtgttgaagatccaaaagaccaaggataaggcctccaagagct 419
||||||| |||||||||||| |||||||||| ||||||||||| ||| || |||||||||
Sbjct: 190 agaagattgtgaagaaggtgctgaagatccagaagaccaaggaaaagaccaccaagagct 131
Query: 420 a 420
|
Sbjct: 130 a 130
>gb|BG345169.2|BG345169 HVSMEg0018P11f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0018P11f, mRNA sequence
Length = 640
Score = 383 bits (193), Expect = e-105
Identities = 319/361 (88%)
Strand = Plus / Plus
Query: 60 agatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccaga 119
|||||||||||||||| || ||||| ||||| ||||||||||||||||| ||||||||||
Sbjct: 58 agatggtgcagcggctgacataccgaaagcgccacagctacgccaccaagtcgaaccaga 117
Query: 120 cccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcga 179
| |||||||||||||| || ||||||| |||||||||||||||||||| ||||| ||||
Sbjct: 118 ctcgcgtcgtcaagaccccaggtgggaggcttgtgtaccagtacaccaaaaagcgggcga 177
Query: 180 gcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctg 239
| || || || ||||| || ||||||||||||||||||||||||||||||||||| |||
Sbjct: 178 gtgggccaaaatgcccggttaccgggaagaagatccaaggaattccacacctgaggccta 237
Query: 240 ctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcg 299
||||||||||||||||||| ||| ||||||||| |||||||| || ||||| || || |
Sbjct: 238 ctgagtacaagaggtccagattgtcaaggaaccggaggactgtaaaccgtccttacggtg 297
Query: 300 gtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaac 359
|||||||||||||| ||||||| ||||||||||||||| || |||||||||||||| |
Sbjct: 298 gtgttctgtctggtcctgcagtcagggagaggatcatcacggcgtttttggttgaggagc 357
Query: 360 agaagatagtgaagaaggtgttgaagatccaaaagaccaaggataaggcctccaagagct 419
||||||| |||||||||||| |||||||||| ||||||||||| ||| || |||||||||
Sbjct: 358 agaagattgtgaagaaggtgctgaagatccagaagaccaaggaaaagaccaccaagagct 417
Query: 420 a 420
|
Sbjct: 418 a 418
>gb|BE602589.3|BE602589 HVSMEh0100E03f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0100E03f, mRNA sequence
Length = 573
Score = 383 bits (193), Expect = e-105
Identities = 319/361 (88%)
Strand = Plus / Plus
Query: 60 agatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccaga 119
|||||||||||||||| || ||||| ||||| ||||||||||||||||| ||||||||||
Sbjct: 64 agatggtgcagcggctgacataccgaaagcgccacagctacgccaccaagtcgaaccaga 123
Query: 120 cccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcga 179
| |||||||||||||| || ||||||| |||||||||||||||||||| ||||| ||||
Sbjct: 124 ctcgcgtcgtcaagaccccaggtgggaggcttgtgtaccagtacaccaaaaagcgggcga 183
Query: 180 gcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctg 239
| || || || ||||| || ||||||||||||||||||||||||||||||||||| |||
Sbjct: 184 gtgggccaaaatgcccggttaccgggaagaagatccaaggaattccacacctgaggccta 243
Query: 240 ctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcg 299
|||||||||||| |||||| ||| ||||||||| |||||||| || ||||| || || |
Sbjct: 244 ctgagtacaagaagtccagattgtcaaggaaccggaggactgtaaaccgtccttacggtg 303
Query: 300 gtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaac 359
|||||||||||||| ||||||| ||||||||||||||| | || |||||||||||||| |
Sbjct: 304 gtgttctgtctggtcctgcagtcagggagaggatcatcagggcgtttttggttgaggagc 363
Query: 360 agaagatagtgaagaaggtgttgaagatccaaaagaccaaggataaggcctccaagagct 419
||||||| |||||||||||| |||||||||| ||||||||||| ||| || |||||||||
Sbjct: 364 agaagattgtgaagaaggtgctgaagatccagaagaccaaggaaaagaccaccaagagct 423
Query: 420 a 420
|
Sbjct: 424 a 424
>gb|BQ657857.1|BQ657857 HA06L05u HA Hordeum vulgare subsp. vulgare cDNA clone HA06L05
3-PRIME, mRNA sequence
Length = 486
Score = 383 bits (193), Expect = e-105
Identities = 316/357 (88%)
Strand = Plus / Minus
Query: 64 ggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccagacccg 123
|||||||||||| || ||||| ||||| ||||||||||||||||| ||||||||||| ||
Sbjct: 486 ggtgcagcggctgacataccgaaagcgccacagctacgccaccaagtcgaaccagactcg 427
Query: 124 cgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcgagcgg 183
|||||||||||| || ||||||| |||||||||||||||||||| ||||| ||||| ||
Sbjct: 426 cgtcgtcaagaccccaggtgggaggcttgtgtaccagtacaccaaaaagcgggcgagtgg 367
Query: 184 accgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctgctga 243
|| || ||||| || ||||||||||||||||||||||||||||||||||| ||| ||||
Sbjct: 366 gccaaaatgcccggttaccgggaagaagatccaaggaattccacacctgaggcctactga 307
Query: 244 gtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcggtgt 303
||||||||||||||| ||| ||||||||| |||||||| || ||||| || || |||||
Sbjct: 306 gtacaagaggtccagattgtcaaggaaccggaggactgtaaaccgtccttacggtggtgt 247
Query: 304 tctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaacagaa 363
|||||||||| ||||||| ||||||||||||||| | || |||||||||||||| |||||
Sbjct: 246 tctgtctggtcctgcagtcagggagaggatcatcagggcgtttttggttgaggagcagaa 187
Query: 364 gatagtgaagaaggtgttgaagatccaaaagaccaaggataaggcctccaagagcta 420
||| |||||||||||| |||||||||| ||||||||||| ||| || ||||||||||
Sbjct: 186 gattgtgaagaaggtgctgaagatccagaagaccaaggaaaagaccaccaagagcta 130
>gb|BM374027.2|BM374027 EBma03_SQ003_G19_R maternal, 8 DPA, no treatment, cv Optic, EBma03
Hordeum vulgare subsp. vulgare cDNA clone
EBma03_SQ003_G19 5', mRNA sequence
Length = 518
Score = 383 bits (193), Expect = e-105
Identities = 319/361 (88%)
Strand = Plus / Plus
Query: 60 agatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccaga 119
|||||||||||||||| || ||||| ||||| ||||||||||||||||| ||||||||||
Sbjct: 55 agatggtgcagcggctgacataccgaaagcgccacagctacgccaccaagtcgaaccaga 114
Query: 120 cccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcga 179
| |||||||||||||| || ||||||| ||||||||| |||||||||| ||||| ||||
Sbjct: 115 ctcgcgtcgtcaagaccccaggtgggaggcttgtgtactagtacaccaaaaagcgggcga 174
Query: 180 gcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctg 239
| || || || ||||| || ||||||||||||||||||||||||||||||||||| |||
Sbjct: 175 gtgggccaaaatgcccggttaccgggaagaagatccaaggaattccacacctgaggccta 234
Query: 240 ctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcg 299
||||||||||||||||||| ||| ||||||||| |||||||| || ||||| || || |
Sbjct: 235 ctgagtacaagaggtccagattgtcaaggaaccggaggactgtaaaccgtccttacggtg 294
Query: 300 gtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaac 359
|||||||||||||| ||||||| ||||||||||||||| | || |||||||||||||| |
Sbjct: 295 gtgttctgtctggtcctgcagtcagggagaggatcatcagggcgtttttggttgaggagc 354
Query: 360 agaagatagtgaagaaggtgttgaagatccaaaagaccaaggataaggcctccaagagct 419
||||||| |||||||||||| |||||||||| ||||||||||| ||| || |||||||||
Sbjct: 355 agaagattgtgaagaaggtgctgaagatccagaagaccaaggaaaagaccaccaagagct 414
Query: 420 a 420
|
Sbjct: 415 a 415
>gb|BM097948.2|BM097948 EBpi03_SQ002_C02_R pistil, 4 DPA, no treatment, cv Optic, EBpi03
Hordeum vulgare subsp. vulgare cDNA clone
EBpi03_SQ002_C02 5', mRNA sequence
Length = 560
Score = 383 bits (193), Expect = e-105
Identities = 316/357 (88%)
Strand = Plus / Plus
Query: 64 ggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccagacccg 123
|||||||||||| || ||||| ||||| ||||||||||||||||| ||||||||||| ||
Sbjct: 1 ggtgcagcggctgacataccgaaagcgccacagctacgccaccaagtcgaaccagactcg 60
Query: 124 cgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcgagcgg 183
|||||||||||| || ||||||| |||||||||||||||||||| ||||| ||||| ||
Sbjct: 61 cgtcgtcaagaccccaggtgggaggcttgtgtaccagtacaccaaaaagcgggcgagtgg 120
Query: 184 accgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctgctga 243
|| || ||||| || ||||||||||||||||||||||||||||||||||| ||| ||||
Sbjct: 121 gccaaaatgcccggttaccgggaagaagatccaaggaattccacacctgaggcctactga 180
Query: 244 gtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcggtgt 303
||||||||||||||| ||| ||||||||| |||||||| || ||||| || || |||||
Sbjct: 181 gtacaagaggtccagattgtcaaggaaccggaggactgtaaaccgtccttacggtggtgt 240
Query: 304 tctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaacagaa 363
|||||||||| ||||||| ||||||||||||||| | || |||||||||||||| |||||
Sbjct: 241 tctgtctggtcctgcagtcagggagaggatcatcagggcgtttttggttgaggagcagaa 300
Query: 364 gatagtgaagaaggtgttgaagatccaaaagaccaaggataaggcctccaagagcta 420
||| |||||||||||| |||||||||| ||||||||||| ||| || ||||||||||
Sbjct: 301 gattgtgaagaaggtgctgaagatccagaagaccaaggaaaagaccaccaagagcta 357
>gb|AJ463505.1|AJ463505 AJ463505 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200028G02F1, mRNA sequence
Length = 360
Score = 379 bits (191), Expect = e-104
Identities = 305/343 (88%)
Strand = Plus / Plus
Query: 60 agatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccaga 119
|||||||||||||||| || ||||| ||||| ||||||||||||||||| ||||||||||
Sbjct: 17 agatggtgcagcggctgacataccgaaagcgccacagctacgccaccaagtcgaaccaga 76
Query: 120 cccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcga 179
| |||||||||||||| || ||||||| |||||||||||||||||||| ||||| ||||
Sbjct: 77 ctcgcgtcgtcaagaccccaggtgggaggcttgtgtaccagtacaccaaaaagcgggcga 136
Query: 180 gcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctg 239
| || || || ||||| || ||||||||||||||||||||||||||||||||||| |||
Sbjct: 137 gtgggccaaaatgcccggttaccgggaagaagatccaaggaattccacacctgaggccta 196
Query: 240 ctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcg 299
||||||||||||||||||| ||| ||||||||| |||||||| || ||||| || || |
Sbjct: 197 ctgagtacaagaggtccagattgtcaaggaaccggaggactgtaaaccgtccttacggtg 256
Query: 300 gtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaac 359
|||||||||||||| ||||||| ||||||||||||||| | || |||||||||||||| |
Sbjct: 257 gtgttctgtctggtcctgcagtcagggagaggatcatcagggcgtttttggttgaggagc 316
Query: 360 agaagatagtgaagaaggtgttgaagatccaaaagaccaagga 402
||||||| |||||||||||| |||||||||| |||||||||||
Sbjct: 317 agaagattgtgaagaaggtgctgaagatccagaagaccaagga 359
>gb|CK123586.1|CK123586 BES1824104i20 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010I204 5-PRIME, mRNA sequence
Length = 555
Score = 377 bits (190), Expect = e-103
Identities = 304/342 (88%)
Strand = Plus / Plus
Query: 60 agatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccaga 119
|||||||||||||||| || ||||| ||||| ||||||||||||||||| ||||||||||
Sbjct: 62 agatggtgcagcggctgacataccgaaagcgccacagctacgccaccaagtcgaaccaga 121
Query: 120 cccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcga 179
| |||||||||||||| || ||||||| |||||||||||||||||||| ||||| ||||
Sbjct: 122 ctcgcgtcgtcaagaccccaggtgggaggcttgtgtaccagtacaccaaaaagcgggcga 181
Query: 180 gcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctg 239
| || || || ||||| || ||||||||||||||||||||||||||||||||||| |||
Sbjct: 182 gtgggccaaaatgcccggttaccgggaagaagatccaaggaattccacacctgaggccta 241
Query: 240 ctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcg 299
||||||||||||||||||| ||| ||||||||| |||||||| || ||||| || || |
Sbjct: 242 ctgagtacaagaggtccagattgtcaaggaaccggaggactgtaaaccgtccttacggtg 301
Query: 300 gtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaac 359
|||||||||||||| ||||||| ||||||||||||||| | || |||||||||||||| |
Sbjct: 302 gtgttctgtctggtcctgcagtcagggagaggatcatcagggcgtttttggttgaggagc 361
Query: 360 agaagatagtgaagaaggtgttgaagatccaaaagaccaagg 401
||||||| |||||||||||| |||||||||| ||||||||||
Sbjct: 362 agaagattgtgaagaaggtgctgaagatccagaagaccaagg 403
>gb|BQ753628.1|BQ753628 EBan01_SQ004_M18_R anther, yellow stage, no treatment, cv Optic,
EBan01 Hordeum vulgare subsp. vulgare cDNA clone
EBan01_SQ004_M18 5', mRNA sequence
Length = 423
Score = 375 bits (189), Expect = e-102
Identities = 318/361 (88%)
Strand = Plus / Plus
Query: 60 agatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccaga 119
|||||||||||||||| || ||||| ||||| ||||||||||||||||| ||||||||||
Sbjct: 49 agatggtgcagcggctgacataccgaaagcgccacagctacgccaccaagtcgaaccaga 108
Query: 120 cccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcga 179
| |||||||||||||| || ||||||| |||||||||||||||||||| ||||| ||||
Sbjct: 109 ctcgcgtcgtcaagaccccaggtgggaggcttgtgtaccagtacaccaaaaagcgggcga 168
Query: 180 gcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctg 239
| || || || ||||| || ||||||||||||||||||||||||||||||||||| |||
Sbjct: 169 gtgggccaaaatgcccggttaccgggaagaagatccaaggaattccacacctgaggccta 228
Query: 240 ctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcg 299
||||||||||||||||||| ||| ||||||||| |||||||| || ||||| || || |
Sbjct: 229 ctgagtacaagaggtccagattgtcaaggaaccggaggactgtaaaccgtccttacggtg 288
Query: 300 gtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaac 359
|||||||||||||| ||||||| | ||||||||||||| || |||||||||||||| |
Sbjct: 289 gtgttctgtctggtcctgcagtcaaggagaggatcatcacggcgtttttggttgaggagc 348
Query: 360 agaagatagtgaagaaggtgttgaagatccaaaagaccaaggataaggcctccaagagct 419
||||||| |||||||||||| |||||||||| ||||||||||| ||| || |||||||||
Sbjct: 349 agaagattgtgaagaaggtgctgaagatccagaagaccaaggaaaagaccaccaagagct 408
Query: 420 a 420
|
Sbjct: 409 a 409
>gb|BU983205.1|BU983205 HA28O08r HA Hordeum vulgare subsp. vulgare cDNA clone HA28O08
5-PRIME, mRNA sequence
Length = 566
Score = 375 bits (189), Expect = e-102
Identities = 318/361 (88%)
Strand = Plus / Plus
Query: 60 agatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccaga 119
|||||||||||||||| || ||||| ||||| ||||||||||||||||| ||||||||||
Sbjct: 100 agatggtgcagcggctgacataccgaaagcgccacagctacgccaccaagtcgaaccaga 159
Query: 120 cccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcga 179
| ||||||||||| || || ||||||| |||||||||||||||||||| ||||| |||
Sbjct: 160 ctcgcgtcgtcaataccccaggtgggaggcttgtgtaccagtacaccaaaaagcgttcga 219
Query: 180 gcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctg 239
| || || || ||||| || ||||||||||||||||||||||||||||||||||| |||
Sbjct: 220 gtgggccaaaatgcccggttaccgggaagaagatccaaggaattccacacctgaggccta 279
Query: 240 ctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcg 299
||||||||||||||||||| ||| ||||||||| |||||||| || ||||| || || |
Sbjct: 280 ctgagtacaagaggtccagattgtcaaggaaccggaggactgtaaaccgtccttacggtg 339
Query: 300 gtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaac 359
|||||||||||||| ||||||| ||||||||||||||| | || |||||||||||||| |
Sbjct: 340 gtgttctgtctggtcctgcagtcagggagaggatcatcagggcgtttttggttgaggagc 399
Query: 360 agaagatagtgaagaaggtgttgaagatccaaaagaccaaggataaggcctccaagagct 419
||||||| |||||||||||| |||||||||| ||||||||||| ||| || |||||||||
Sbjct: 400 agaagattgtgaagaaggtgctgaagatccagaagaccaaggaaaagaccaccaagagct 459
Query: 420 a 420
|
Sbjct: 460 a 460
>gb|BF621734.2|BF621734 HVSMEa0012D07f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0012D07f, mRNA sequence
Length = 852
Score = 373 bits (188), Expect = e-102
Identities = 302/340 (88%)
Strand = Plus / Plus
Query: 60 agatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccaga 119
|||||||||||||||| || ||||| ||||| ||||||||||||||||| ||||||||||
Sbjct: 55 agatggtgcagcggctgacataccgaaagcgccacagctacgccaccaagtcgaaccaga 114
Query: 120 cccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcga 179
| |||||||||||||| || ||||||| |||||||||||||||||||| ||||| ||||
Sbjct: 115 ctcgcgtcgtcaagaccccaggtgggaggcttgtgtaccagtacaccaaaaagcgggcga 174
Query: 180 gcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctg 239
| || || || ||||| || ||||||||||||||||||||||||||||||||||| |||
Sbjct: 175 gtgggccaaaatgcccggttaccgggaagaagatccaaggaattccacacctgaggccta 234
Query: 240 ctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcg 299
||||||||||||||||||| ||| ||||||||| |||||||| || ||||| || || |
Sbjct: 235 ctgagtacaagaggtccagattgtcaaggaaccggaggactgtaaaccgtccttacggtg 294
Query: 300 gtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaac 359
|||||||||||||| ||||||| ||||||||||||||| | || |||||||||||||| |
Sbjct: 295 gtgttctgtctggtcctgcagtcagggagaggatcatcagggcgtttttggttgaggagc 354
Query: 360 agaagatagtgaagaaggtgttgaagatccaaaagaccaa 399
||||||| |||||||||||| |||||||||| ||||||||
Sbjct: 355 agaagattgtgaagaaggtgctgaagatccagaagaccaa 394
>gb|BJ467052.1|BJ467052 BJ467052 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags35m07 3', mRNA sequence
Length = 544
Score = 371 bits (187), Expect = e-101
Identities = 310/351 (88%)
Strand = Plus / Minus
Query: 70 gcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccagacccgcgtcgt 129
|||||| || ||||| ||||| ||||||||||||||||| ||||||||||| ||||||||
Sbjct: 544 gcggctgacataccgaaagcgccacagctacgccaccaagtcgaaccagactcgcgtcgt 485
Query: 130 caagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcgagcggaccgaa 189
|||||| || ||||||| |||||||||||||||||||| ||||| ||||| || || ||
Sbjct: 484 caagaccccaggtgggaggcttgtgtaccagtacaccaaaaagcgggcgagtgggccaaa 425
Query: 190 gtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctgctgagtacaa 249
||||| || ||||||||||||||||||||||||||||||||||| ||| ||||||||||
Sbjct: 424 atgcccggttaccgggaagaagatccaaggaattccacacctgaggcctactgagtacaa 365
Query: 250 gaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcggtgttctgtc 309
||||||||| ||| ||||||||| |||||||| || ||||| || || |||||||||||
Sbjct: 364 gaggtccagattgtcaaggaaccggaggactgtaaaccgtccttacggtggtgttctgtc 305
Query: 310 tggtactgcagttagggagaggatcatccgcgcctttttggttgaggaacagaagatagt 369
|||| ||||||| ||||||||||||||| | || |||||||||||||| |||||||| ||
Sbjct: 304 tggtcctgcagtcagggagaggatcatcagggcgtttttggttgaggagcagaagattgt 245
Query: 370 gaagaaggtgttgaagatccaaaagaccaaggataaggcctccaagagcta 420
|||||||||| |||||||||| ||||||||||| ||| || ||||||||||
Sbjct: 244 gaagaaggtgctgaagatccagaagaccaaggaaaagaccaccaagagcta 194
>gb|BM375644.2|BM375644 EBem06_SQ003_P15_R embryo, 21 DPA, no treatment, cv Optic, EBem06
Hordeum vulgare subsp. vulgare cDNA clone
EBem06_SQ003_P15 5', mRNA sequence
Length = 529
Score = 369 bits (186), Expect = e-101
Identities = 319/362 (88%), Gaps = 1/362 (0%)
Strand = Plus / Plus
Query: 60 agatggtgcagcg-gctcacctaccggaagcggcacagctacgccaccaaatcgaaccag 118
||||||||||||| ||| || ||||| ||||| ||||||||||||||||| |||||||||
Sbjct: 58 agatggtgcagcgagctgacataccgaaagcgccacagctacgccaccaagtcgaaccag 117
Query: 119 acccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcg 178
|| |||||||||||||| || ||||||| |||||||||||||||||||| ||||| |||
Sbjct: 118 actcgcgtcgtcaagaccccaggtgggaggcttgtgtaccagtacaccaaaaagcgggcg 177
Query: 179 agcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacct 238
|| || || || ||||| || ||||||||||||||||||||||||||||||||||| |||
Sbjct: 178 agtgggccaaaatgcccggttaccgggaagaagatccaaggaattccacacctgaggcct 237
Query: 239 gctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggc 298
||||||||||||||||||| ||| ||||||||| |||||||| || ||||| || ||
Sbjct: 238 actgagtacaagaggtccagattgtcaaggaaccggaggactgtaaaccgtccttacggt 297
Query: 299 ggtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaa 358
||||||||||||||| ||||||| ||||||||||||||| || ||||||||||||||
Sbjct: 298 ggtgttctgtctggtcctgcagtcagggagaggatcatcatggcgtttttggttgaggag 357
Query: 359 cagaagatagtgaagaaggtgttgaagatccaaaagaccaaggataaggcctccaagagc 418
|||||||| |||||||||||| |||||||||| ||||||||||| ||| || ||||||||
Sbjct: 358 cagaagattgtgaagaaggtgctgaagatccagaagaccaaggaaaagaccaccaagagc 417
Query: 419 ta 420
||
Sbjct: 418 ta 419
>gb|AJ436292.1|AJ436292 AJ436292 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200001F08F1, mRNA sequence
Length = 379
Score = 367 bits (185), Expect = e-100
Identities = 302/341 (88%)
Strand = Plus / Plus
Query: 80 taccggaagcggcacagctacgccaccaaatcgaaccagacccgcgtcgtcaagacacct 139
||||| ||||| ||||||||||||||||| ||||||||||| |||||||||||||| ||
Sbjct: 9 taccgaaagcgccacagctacgccaccaagtcgaaccagactcgcgtcgtcaagacccca 68
Query: 140 ggtgggaaacttgtgtaccagtacaccaagaagcgcgcgagcggaccgaagtgcccagtc 199
||||||| |||||||||||||||||||| ||||| ||||| || || || ||||| ||
Sbjct: 69 ggtgggaggcttgtgtaccagtacaccaaaaagcgggcgagtgggccaaaatgcccggtt 128
Query: 200 accgggaagaagatccaaggaattccacacctgagacctgctgagtacaagaggtccagg 259
||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||
Sbjct: 129 accgggaagaagatccaaggaattccacacctgaggcctactgagtacaagaggtccaga 188
Query: 260 ttggcaaggaaccaaaggactgtgaatcgtccatatggcggtgttctgtctggtactgca 319
||| ||||||||| |||||||| || ||||| || || ||||||||||||||| |||||
Sbjct: 189 ttgtcaaggaaccggaggactgtaaaccgtccttacggtggtgttctgtctggtcctgca 248
Query: 320 gttagggagaggatcatccgcgcctttttggttgaggaacagaagatagtgaagaaggtg 379
|| ||||||||||||||| | || |||||||||||||| |||||||| ||||||||||||
Sbjct: 249 gtcagggagaggatcatcagggcgtttttggttgaggagcagaagattgtgaagaaggtg 308
Query: 380 ttgaagatccaaaagaccaaggataaggcctccaagagcta 420
|||||||||| ||||||||||| ||| || ||||||||||
Sbjct: 309 ctgaagatccagaagaccaaggaaaagaccaccaagagcta 349
>gb|BU967275.1|BU967275 HB03M20r BC Hordeum vulgare subsp. vulgare cDNA clone HB03M20
5-PRIME, mRNA sequence
Length = 482
Score = 367 bits (185), Expect = e-100
Identities = 302/341 (88%)
Strand = Plus / Plus
Query: 80 taccggaagcggcacagctacgccaccaaatcgaaccagacccgcgtcgtcaagacacct 139
||||| ||||| ||||||||||||||||| ||||||||||| |||||||||||||| ||
Sbjct: 19 taccgaaagcgccacagctacgccaccaagtcgaaccagactcgcgtcgtcaagacccca 78
Query: 140 ggtgggaaacttgtgtaccagtacaccaagaagcgcgcgagcggaccgaagtgcccagtc 199
||||||| |||||||||||||||||||| ||||| ||||| || || || ||||| ||
Sbjct: 79 ggtgggaggcttgtgtaccagtacaccaaaaagcgggcgagtgggccaaaatgcccggtt 138
Query: 200 accgggaagaagatccaaggaattccacacctgagacctgctgagtacaagaggtccagg 259
||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||
Sbjct: 139 accgggaagaagatccaaggaattccacacctgaggcctactgagtacaagaggtccaga 198
Query: 260 ttggcaaggaaccaaaggactgtgaatcgtccatatggcggtgttctgtctggtactgca 319
||| ||||||||| |||||||| || ||||| || || ||||||||||||||| |||||
Sbjct: 199 ttgtcaaggaaccggaggactgtaaaccgtccttacggtggtgttctgtctggtcctgca 258
Query: 320 gttagggagaggatcatccgcgcctttttggttgaggaacagaagatagtgaagaaggtg 379
|| ||||||||||||||| | || |||||||||||||| |||||||| ||||||||||||
Sbjct: 259 gtcagggagaggatcatcagggcgtttttggttgaggagcagaagattgtgaagaaggtg 318
Query: 380 ttgaagatccaaaagaccaaggataaggcctccaagagcta 420
|||||||||| ||||||||||| ||| || ||||||||||
Sbjct: 319 ctgaagatccagaagaccaaggaaaagaccaccaagagcta 359
>gb|BG342877.1|BG342877 HVSMEg0001B08f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0001B08f, mRNA sequence
Length = 836
Score = 361 bits (182), Expect = 2e-098
Identities = 316/361 (87%)
Strand = Plus / Plus
Query: 60 agatggtgcagcggctcacctaccggaagcggcacagctacgccaccaaatcgaaccaga 119
|||||||||||||||| || ||||| ||||| ||||||||||||||||| ||||||||||
Sbjct: 54 agatggtgcagcggctgacataccgaaagcgccacagctacgccaccaagtcgaaccaga 113
Query: 120 cccgcgtcgtcaagacacctggtgggaaacttgtgtaccagtacaccaagaagcgcgcga 179
| |||||||||||||| || ||||||| |||||||||||||||||||| ||||| ||||
Sbjct: 114 ctcgcgtcgtcaagaccccaggtgggaggcttgtgtaccagtacaccaaaaagcgggcga 173
Query: 180 gcggaccgaagtgcccagtcaccgggaagaagatccaaggaattccacacctgagacctg 239
| || || || ||||| || ||||||||||||||||||||||||||||||||||| |||
Sbjct: 174 gtgggccaaaatgcccggttaccgggaagaagatccaaggaattccacacctgaggccta 233
Query: 240 ctgagtacaagaggtccaggttggcaaggaaccaaaggactgtgaatcgtccatatggcg 299
||||||||||||||||||| ||| ||||||||| |||||||| || ||||| || || |
Sbjct: 234 ctgagtacaagaggtccagattgtcaaggaaccggaggactgtaaaccgtccttacggtg 293
Query: 300 gtgttctgtctggtactgcagttagggagaggatcatccgcgcctttttggttgaggaac 359
|||||||||||||| ||||||| ||||||||||||||| || |||||||||||||| |
Sbjct: 294 gtgttctgtctggtcctgcagtcagggagaggatcatcatggcgtttttggttgaggagc 353
Query: 360 agaagatagtgaagaaggtgttgaagatccaaaagaccaaggataaggcctccaagagct 419
| | || |||||||||||| |||||||||| ||||||||||| ||| || |||||||||
Sbjct: 354 angaaattgtgaagaaggtgctgaagatccagaagaccaaggaaaagaccaccaagagct 413
Query: 420 a 420
|
Sbjct: 414 a 414
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 58,675
Number of Sequences: 312970
Number of extensions: 58675
Number of successful extensions: 18679
Number of sequences better than 0.5: 230
Number of HSP's better than 0.5 without gapping: 230
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 18367
Number of HSP's gapped (non-prelim): 241
length of query: 644
length of database: 175,134,539
effective HSP length: 19
effective length of query: 625
effective length of database: 169,188,109
effective search space: 105742568125
effective search space used: 105742568125
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)