BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2192958.2.3
(1681 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BE559324.1|BE559324 HV_CEb0024B22f Hordeum vulgare seedl... 543 e-153
gb|BU983194.1|BU983194 HA28N18r HA Hordeum vulgare subsp. v... 509 e-143
gb|CA013492.1|CA013492 HT08K04r HT Hordeum vulgare subsp. v... 505 e-141
gb|AV932975.1|AV932975 AV932975 K. Sato unpublished cDNA li... 500 e-140
gb|BJ547556.1|BJ547556 BJ547556 K. Sato unpublished cDNA li... 500 e-140
gb|AV926309.1|AV926309 AV926309 K. Sato unpublished cDNA li... 496 e-138
gb|BJ547080.1|BJ547080 BJ547080 K. Sato unpublished cDNA li... 496 e-138
gb|AV924641.1|AV924641 AV924641 K. Sato unpublished cDNA li... 490 e-137
gb|BF265760.2|BF265760 HV_CEa0013E07f Hordeum vulgare seedl... 488 e-136
gb|BQ767061.1|BQ767061 EBro08_SQ007_I24_R root, 3 week, dro... 480 e-134
gb|BI776717.2|BI776717 EBpi07_SQ001_I13_R pistil, 12 DPA, n... 476 e-132
gb|BJ547912.1|BJ547912 BJ547912 K. Sato unpublished cDNA li... 476 e-132
gb|AL507668.1|AL507668 AL507668 Hordeum vulgare Barke devel... 474 e-132
gb|BJ547588.1|BJ547588 BJ547588 K. Sato unpublished cDNA li... 474 e-132
gb|BJ548555.1|BJ548555 BJ548555 K. Sato unpublished cDNA li... 464 e-129
gb|BJ548639.1|BJ548639 BJ548639 K. Sato unpublished cDNA li... 464 e-129
gb|BJ549776.1|BJ549776 BJ549776 K. Sato unpublished cDNA li... 464 e-129
gb|AV932812.1|AV932812 AV932812 K. Sato unpublished cDNA li... 462 e-128
gb|CA002177.1|CA002177 HS06L24r HS Hordeum vulgare subsp. v... 462 e-128
gb|BJ549828.1|BJ549828 BJ549828 K. Sato unpublished cDNA li... 462 e-128
gb|BJ549026.1|BJ549026 BJ549026 K. Sato unpublished cDNA li... 458 e-127
gb|BJ547294.1|BJ547294 BJ547294 K. Sato unpublished cDNA li... 444 e-123
gb|AV918791.1|AV918791 AV918791 K. Sato unpublished cDNA li... 436 e-120
gb|CB859966.1|CB859966 HI12C19w HI Hordeum vulgare subsp. v... 434 e-120
gb|AV918185.1|AV918185 AV918185 K. Sato unpublished cDNA li... 432 e-119
gb|AV935618.1|AV935618 AV935618 K. Sato unpublished cDNA li... 432 e-119
gb|BJ451484.1|BJ451484 BJ451484 K. Sato unpublished cDNA li... 428 e-118
gb|AV915331.1|AV915331 AV915331 K. Sato unpublished cDNA li... 420 e-116
gb|AV933573.1|AV933573 AV933573 K. Sato unpublished cDNA li... 420 e-116
gb|BJ471254.1|BJ471254 BJ471254 K. Sato unpublished cDNA li... 420 e-116
gb|CA003896.1|CA003896 HS15P12r HS Hordeum vulgare subsp. v... 420 e-116
gb|BJ547299.1|BJ547299 BJ547299 K. Sato unpublished cDNA li... 420 e-116
gb|AV931194.1|AV931194 AV931194 K. Sato unpublished cDNA li... 418 e-115
gb|BJ458979.1|BJ458979 BJ458979 K. Sato unpublished cDNA li... 414 e-114
gb|AV918750.1|AV918750 AV918750 K. Sato unpublished cDNA li... 410 e-113
gb|AV913049.1|AV913049 AV913049 K. Sato unpublished cDNA li... 408 e-112
gb|AV934096.1|AV934096 AV934096 K. Sato unpublished cDNA li... 408 e-112
gb|AV918501.1|AV918501 AV918501 K. Sato unpublished cDNA li... 406 e-112
gb|BJ547221.1|BJ547221 BJ547221 K. Sato unpublished cDNA li... 404 e-111
gb|BE193876.2|BE193876 HVSMEh0082M09f Hordeum vulgare 5-45 ... 402 e-110
gb|CB877624.1|CB877624 HP05J18T HP Hordeum vulgare subsp. v... 400 e-110
gb|AV936347.1|AV936347 AV936347 K. Sato unpublished cDNA li... 396 e-109
gb|BJ548460.1|BJ548460 BJ548460 K. Sato unpublished cDNA li... 396 e-109
gb|BJ548534.1|BJ548534 BJ548534 K. Sato unpublished cDNA li... 396 e-109
gb|BF265966.2|BF265966 HV_CEa0013M21f Hordeum vulgare seedl... 394 e-108
gb|AV935440.1|AV935440 AV935440 K. Sato unpublished cDNA li... 394 e-108
gb|CA017990.1|CA017990 HV07B06r HV Hordeum vulgare subsp. v... 394 e-108
gb|AL506148.1|AL506148 AL506148 Hordeum vulgare Barke devel... 387 e-106
gb|BM370867.2|BM370867 EBro04_SQ002_J15_R root, 3 week, sal... 387 e-106
gb|CA003209.1|CA003209 HS09L24r HS Hordeum vulgare subsp. v... 387 e-106
gb|CA007094.1|CA007094 HU06L13r HU Hordeum vulgare subsp. v... 387 e-106
gb|BJ548050.1|BJ548050 BJ548050 K. Sato unpublished cDNA li... 387 e-106
gb|AL504114.1|AL504114 AL504114 Hordeum vulgare Barke roots... 385 e-105
gb|AV913493.1|AV913493 AV913493 K. Sato unpublished cDNA li... 381 e-104
gb|AV936006.1|AV936006 AV936006 K. Sato unpublished cDNA li... 381 e-104
gb|AV913207.1|AV913207 AV913207 K. Sato unpublished cDNA li... 375 e-102
gb|AV913448.1|AV913448 AV913448 K. Sato unpublished cDNA li... 371 e-101
gb|AV917803.1|AV917803 AV917803 K. Sato unpublished cDNA li... 369 e-100
gb|AV923044.1|AV923044 AV923044 K. Sato unpublished cDNA li... 369 e-100
gb|CA023375.1|CA023375 HZ46A15r HZ Hordeum vulgare subsp. v... 369 e-100
gb|AV919081.1|AV919081 AV919081 K. Sato unpublished cDNA li... 367 e-100
gb|CA002173.1|CA002173 HS06L19r HS Hordeum vulgare subsp. v... 367 e-100
gb|BQ764206.1|BQ764206 EBan01_SQ005_M06_R anther, yellow st... 365 3e-099
gb|AV929735.1|AV929735 AV929735 K. Sato unpublished cDNA li... 361 5e-098
gb|AV926156.1|AV926156 AV926156 K. Sato unpublished cDNA li... 359 2e-097
gb|BU999535.1|BU999535 HI14M21r HI Hordeum vulgare subsp. v... 353 1e-095
gb|CB874739.1|CB874739 HX06C21w HX Hordeum vulgare subsp. v... 353 1e-095
gb|AV921881.1|AV921881 AV921881 K. Sato unpublished cDNA li... 349 2e-094
gb|BJ456136.1|BJ456136 BJ456136 K. Sato unpublished cDNA li... 345 3e-093
gb|CA027563.1|CA027563 HZ59F03r HZ Hordeum vulgare subsp. v... 345 3e-093
gb|BQ765166.1|BQ765166 EBro03_SQ006_N12_R root, 3 week, wat... 343 1e-092
gb|BI955028.1|BI955028 HVSMEm0020O14f Hordeum vulgare green... 339 2e-091
gb|BM370320.2|BM370320 EBro08_SQ003_N09_R root, 3 week, dro... 337 7e-091
gb|CA000804.1|CA000804 HS06L19u HS Hordeum vulgare subsp. v... 337 7e-091
gb|BJ549059.1|BJ549059 BJ549059 K. Sato unpublished cDNA li... 337 7e-091
gb|AV914052.1|AV914052 AV914052 K. Sato unpublished cDNA li... 333 1e-089
gb|BQ754331.1|BQ754331 EBca01_SQ003_J15_R carpel, pre-anthe... 333 1e-089
gb|BQ754405.1|BQ754405 EBca01_SQ003_N18_R carpel, pre-anthe... 333 1e-089
gb|BF616622.2|BF616622 HVSMEc0010N09f Hordeum vulgare seedl... 327 7e-088
gb|BU988719.1|BU988719 HF18H21r HF Hordeum vulgare subsp. v... 327 7e-088
gb|AJ435921.1|AJ435921 AJ435921 S00002 Hordeum vulgare subs... 315 3e-084
gb|CA027461.1|CA027461 HZ58P24r HZ Hordeum vulgare subsp. v... 309 2e-082
gb|BF616389.2|BF616389 HVSMEc0007C16f Hordeum vulgare seedl... 307 6e-082
gb|AL509560.1|AL509560 AL509560 Hordeum vulgare Barke devel... 305 3e-081
gb|BJ549377.1|BJ549377 BJ549377 K. Sato unpublished cDNA li... 297 6e-079
gb|AV923699.1|AV923699 AV923699 K. Sato unpublished cDNA li... 295 2e-078
gb|BJ549392.1|BJ549392 BJ549392 K. Sato unpublished cDNA li... 293 1e-077
gb|BQ756054.1|BQ756054 EBem05_SQ001_H16_R embryo, 14 DPA, n... 291 4e-077
gb|CB878788.1|CB878788 HP09M21T HP Hordeum vulgare subsp. v... 285 2e-075
gb|CA027458.1|CA027458 HZ58P20r HZ Hordeum vulgare subsp. v... 283 9e-075
gb|AL510951.1|AL510951 AL510951 Hordeum vulgare Barke devel... 274 9e-072
gb|BG367410.1|BG367410 HVSMEi0012C18f Hordeum vulgare 20 DA... 272 4e-071
gb|BU998787.1|BU998787 HI12C19r HI Hordeum vulgare subsp. v... 270 1e-070
gb|BE194325.1|BE194325 HVSMEh0085C11f Hordeum vulgare 5-45 ... 268 5e-070
gb|BM369466.2|BM369466 EBem07_SQ003_K18_R embryo, 28 DPA, n... 264 9e-069
gb|BE420930.1|BE420930 HWM004.A07 ITEC HWM Barley Leaf Libr... 262 3e-068
gb|BE196549.2|BE196549 HVSMEh0092J17f Hordeum vulgare 5-45 ... 262 3e-068
gb|BQ459152.1|BQ459152 HA02C15r HA Hordeum vulgare subsp. v... 262 3e-068
gb|BI947010.1|BI947010 HVSMEl0003D06f Hordeum vulgare spike... 260 1e-067
gb|BM442619.2|BM442619 EBan01_SQ003_L01_R anther, yellow st... 256 2e-066
gb|AV916937.1|AV916937 AV916937 K. Sato unpublished cDNA li... 252 3e-065
gb|BI948387.1|BI948387 HVSMEl0009F14f Hordeum vulgare spike... 246 2e-063
gb|BF624632.2|BF624632 HVSMEa0017F04f Hordeum vulgare seedl... 242 3e-062
gb|BE195094.1|BE195094 HVSMEh0088E12f Hordeum vulgare 5-45 ... 242 3e-062
gb|BF627842.2|BF627842 HVSMEb0005P05f Hordeum vulgare seedl... 242 3e-062
gb|BF065487.1|BF065487 HV_CEb0012J03f Hordeum vulgare seedl... 242 3e-062
gb|BI781165.2|BI781165 EBma03_SQ001_K06_R maternal, 8 DPA, ... 242 3e-062
gb|CA024539.1|CA024539 HZ49J12r HZ Hordeum vulgare subsp. v... 242 3e-062
gb|AL507036.1|AL507036 AL507036 Hordeum vulgare Barke devel... 234 8e-060
gb|AL507613.1|AL507613 AL507613 Hordeum vulgare Barke devel... 234 8e-060
gb|BQ460661.1|BQ460661 HA06E17r HA Hordeum vulgare subsp. v... 234 8e-060
gb|BQ758588.1|BQ758588 EBma07_SQ002_O03_R maternal, 21 DPA,... 234 8e-060
gb|CA002853.1|CA002853 HS08L13r HS Hordeum vulgare subsp. v... 234 8e-060
gb|CA003536.1|CA003536 HS14M16r HS Hordeum vulgare subsp. v... 234 8e-060
gb|CA009497.1|CA009497 HU14E17r HU Hordeum vulgare subsp. v... 234 8e-060
gb|CA018123.1|CA018123 HV07J04r HV Hordeum vulgare subsp. v... 234 8e-060
gb|CA018856.1|CA018856 HV09N19r HV Hordeum vulgare subsp. v... 234 8e-060
gb|CA019760.1|CA019760 HV13A11r HV Hordeum vulgare subsp. v... 234 8e-060
gb|CA020023.1|CA020023 HV14B22r HV Hordeum vulgare subsp. v... 234 8e-060
gb|CV059013.1|CV059013 BNEL43d7 Barley EST endosperm librar... 234 8e-060
gb|AV925669.1|AV925669 AV925669 K. Sato unpublished cDNA li... 232 3e-059
gb|BJ447003.1|BJ447003 BJ447003 K. Sato unpublished cDNA li... 232 3e-059
gb|CA020250.1|CA020250 HV14M06r HV Hordeum vulgare subsp. v... 232 3e-059
gb|AL511322.1|AL511322 AL511322 Hordeum vulgare Barke devel... 228 5e-058
gb|BQ460041.1|BQ460041 HA07G07r HA Hordeum vulgare subsp. v... 226 2e-057
gb|BQ468361.1|BQ468361 HM01A19T HM Hordeum vulgare subsp. v... 226 2e-057
gb|BU967531.1|BU967531 HB04J15r BC Hordeum vulgare subsp. v... 226 2e-057
gb|BU987917.1|BU987917 HF16C03r HF Hordeum vulgare subsp. v... 226 2e-057
gb|BU988005.1|BU988005 HF16G10r HF Hordeum vulgare subsp. v... 226 2e-057
gb|BF262852.2|BF262852 HV_CEa0005C06f Hordeum vulgare seedl... 224 7e-057
gb|BU986529.1|BU986529 HF12C06r HF Hordeum vulgare subsp. v... 224 7e-057
gb|BU988955.1|BU988955 HF19E06r HF Hordeum vulgare subsp. v... 224 7e-057
gb|BG365674.1|BG365674 HVSMEi0003L07f Hordeum vulgare 20 DA... 220 1e-055
gb|BQ470470.1|BQ470470 HX03B07r HX Hordeum vulgare subsp. v... 220 1e-055
gb|CB882786.1|CB882786 HL02N12w HL Hordeum vulgare subsp. v... 220 1e-055
gb|BM817108.1|BM817108 HC02A07_T3.ab1 HC Hordeum vulgare su... 210 1e-052
gb|BQ754039.1|BQ754039 EBca01_SQ002_K06_R carpel, pre-anthe... 210 1e-052
gb|AL501450.1|AL501450 AL501450 Hordeum vulgare Barke roots... 208 4e-052
gb|CA031428.1|CA031428 HX09O18r HX Hordeum vulgare subsp. v... 204 7e-051
gb|BE421001.1|BE421001 HWM004.G06 ITEC HWM Barley Leaf Libr... 202 3e-050
gb|BG310064.1|BG310064 HVSMEc0016D22f Hordeum vulgare seedl... 202 3e-050
gb|CA030030.1|CA030030 HX05O04r HX Hordeum vulgare subsp. v... 202 3e-050
gb|BQ761673.1|BQ761673 EBem10_SQ001_B18_R embryo, 2 Day ger... 200 1e-049
gb|BI949923.1|BI949923 HVSMEl0016P24f Hordeum vulgare spike... 188 4e-046
gb|BJ448413.1|BJ448413 BJ448413 K. Sato unpublished cDNA li... 186 2e-045
gb|BU967401.1|BU967401 HB04D03r BC Hordeum vulgare subsp. v... 178 4e-043
gb|BU987246.1|BU987246 HF14D12r HF Hordeum vulgare subsp. v... 174 6e-042
gb|CA032014.1|CA032014 HX11M05r HX Hordeum vulgare subsp. v... 174 6e-042
gb|BI947601.1|BI947601 HVSMEl0006A21f Hordeum vulgare spike... 172 2e-041
gb|BF625733.2|BF625733 HVSMEa0013G20f Hordeum vulgare seedl... 170 1e-040
gb|CB875982.1|CB875982 HX09O18w HX Hordeum vulgare subsp. v... 163 2e-038
gb|BF065913.3|BF065913 HV_CEb0014F12f Hordeum vulgare seedl... 159 4e-037
gb|BQ664293.1|BQ664293 HV02L16u HV Hordeum vulgare subsp. v... 157 1e-036
gb|BQ665339.1|BQ665339 HX03B07u HX Hordeum vulgare subsp. v... 157 1e-036
gb|AV930296.1|AV930296 AV930296 K. Sato unpublished cDNA li... 153 2e-035
gb|BU971318.1|BU971318 HB17E08r BC Hordeum vulgare subsp. v... 147 1e-033
gb|CA014051.1|CA014051 HT10E01r HT Hordeum vulgare subsp. v... 143 2e-032
gb|BF266282.2|BF266282 HV_CEa0014L02f Hordeum vulgare seedl... 139 3e-031
gb|CB859939.1|CB859939 HI12B03w HI Hordeum vulgare subsp. v... 137 1e-030
gb|BF261461.2|BF261461 HV_CEa0001F14f Hordeum vulgare seedl... 133 2e-029
gb|AJ462891.1|AJ462891 AJ462891 S00002 Hordeum vulgare subs... 129 3e-028
gb|BU998754.1|BU998754 HI12B03r HI Hordeum vulgare subsp. v... 129 3e-028
gb|BU973690.1|BU973690 HB25L17r BC Hordeum vulgare subsp. v... 127 1e-027
gb|BU978653.1|BU978653 HA13N23r HA Hordeum vulgare subsp. v... 127 1e-027
gb|CA017133.1|CA017133 HV14M06u HV Hordeum vulgare subsp. v... 127 1e-027
gb|BF267676.2|BF267676 HV_CEa0018J08f Hordeum vulgare seedl... 117 1e-024
gb|BI953415.1|BI953415 HVSMEm0012J14f Hordeum vulgare green... 111 8e-023
gb|BJ547884.1|BJ547884 BJ547884 K. Sato unpublished cDNA li... 109 3e-022
gb|BU974841.1|BU974841 HB29E10r BC Hordeum vulgare subsp. v... 100 3e-019
gb|BU986091.1|BU986091 HF09K01r HF Hordeum vulgare subsp. v... 100 3e-019
gb|AJ462890.1|AJ462890 AJ462890 S00002 Hordeum vulgare subs... 98 1e-018
gb|CA000372.1|CA000372 HS08L13u HS Hordeum vulgare subsp. v... 96 5e-018
gb|BJ548203.1|BJ548203 BJ548203 K. Sato unpublished cDNA li... 92 7e-017
gb|BG365672.1|BG365672 HVSMEi0003L05f Hordeum vulgare 20 DA... 76 4e-012
gb|AV925145.1|AV925145 AV925145 K. Sato unpublished cDNA li... 72 7e-011
gb|BJ455006.1|BJ455006 BJ455006 K. Sato unpublished cDNA li... 72 7e-011
gb|BM372960.1|BM372960 EBma04_SQ002_J01_R maternal, 10 DPA,... 58 1e-006
gb|AL507409.1|AL507409 AL507409 Hordeum vulgare Barke devel... 56 4e-006
gb|BF623883.2|BF623883 HVSMEa0007H15f Hordeum vulgare seedl... 56 4e-006
gb|BI948616.1|BI948616 HVSMEl0010E07f Hordeum vulgare spike... 56 4e-006
gb|BI949898.1|BI949898 HVSMEl0016N02f Hordeum vulgare spike... 56 4e-006
gb|BI950265.1|BI950265 HVSMEl0020A13f Hordeum vulgare spike... 56 4e-006
gb|BG417170.1|BG417170 HVSMEk0016J11f Hordeum vulgare testa... 56 4e-006
gb|BG368299.2|BG368299 HVSMEi0017H23f Hordeum vulgare 20 DA... 56 4e-006
gb|BM816720.1|BM816720 HC114E01_SK.ab1 HC Hordeum vulgare s... 56 4e-006
gb|BQ460721.1|BQ460721 HA06B20r HA Hordeum vulgare subsp. v... 56 4e-006
gb|BQ469755.1|BQ469755 HZ01M10r HZ Hordeum vulgare subsp. v... 56 4e-006
gb|BQ471536.1|BQ471536 HV02L16r HV Hordeum vulgare subsp. v... 56 4e-006
gb|BM368094.2|BM368094 EBed01_SQ002_C15_R endosperm, 6 DPA,... 56 4e-006
gb|BU978698.1|BU978698 HA14A10r HA Hordeum vulgare subsp. v... 56 4e-006
gb|BU990375.1|BU990375 HF24N12r HF Hordeum vulgare subsp. v... 56 4e-006
gb|CA029934.1|CA029934 HX05J22r HX Hordeum vulgare subsp. v... 56 4e-006
gb|BG309549.1|BG309549 HVSMEc0011A02f Hordeum vulgare seedl... 54 2e-005
gb|BG344813.2|BG344813 HVSMEg0016C23f Hordeum vulgare pre-a... 54 2e-005
gb|BQ467353.1|BQ467353 HS03H23r HS Hordeum vulgare subsp. v... 54 2e-005
gb|BM368741.2|BM368741 EBem08_SQ004_H16_R embryo, 40 DPA, n... 52 6e-005
gb|AL500264.1|AL500264 AL500264 Hordeum vulgare Barke etiol... 48 0.001
gb|AL510614.1|AL510614 AL510614 Hordeum vulgare Barke devel... 48 0.001
gb|BF259025.2|BF259025 HVSMEf0017H02f Hordeum vulgare seedl... 48 0.001
gb|BF257366.3|BF257366 HVSMEf0012L04f Hordeum vulgare seedl... 48 0.001
gb|AV927479.1|AV927479 AV927479 K. Sato unpublished cDNA li... 48 0.001
gb|AV934648.1|AV934648 AV934648 K. Sato unpublished cDNA li... 48 0.001
gb|AV936843.1|AV936843 AV936843 K. Sato unpublished cDNA li... 48 0.001
gb|BQ467403.1|BQ467403 HS03K10r HS Hordeum vulgare subsp. v... 48 0.001
gb|BQ662690.1|BQ662690 HS03K23u HS Hordeum vulgare subsp. v... 48 0.001
gb|BQ665984.1|BQ665984 HZ01M10u HZ Hordeum vulgare subsp. v... 48 0.001
gb|BM371524.2|BM371524 EBma08_SQ003_B03_R maternal, 28 DPA,... 48 0.001
gb|BQ764773.1|BQ764773 EBca01_SQ004_I20 _R carpel, pre-anth... 48 0.001
gb|BU996447.1|BU996447 HM13K09r HM Hordeum vulgare subsp. v... 48 0.001
gb|CA012322.1|CA012322 HT05B17r HT Hordeum vulgare subsp. v... 48 0.001
gb|CA014740.1|CA014740 HT12D14r HT Hordeum vulgare subsp. v... 48 0.001
gb|CA032326.1|CA032326 HX12L02r HX Hordeum vulgare subsp. v... 48 0.001
gb|CA032582.1|CA032582 HX13I12r HX Hordeum vulgare subsp. v... 48 0.001
gb|CA032830.1|CA032830 HX14F06r HX Hordeum vulgare subsp. v... 48 0.001
gb|BJ544857.1|BJ544857 BJ544857 K. Sato unpublished cDNA li... 48 0.001
gb|BJ545521.1|BJ545521 BJ545521 K. Sato unpublished cDNA li... 48 0.001
gb|BJ546339.1|BJ546339 BJ546339 K. Sato unpublished cDNA li... 48 0.001
gb|BQ467415.1|BQ467415 HS03K23r HS Hordeum vulgare subsp. v... 46 0.004
gb|BM374239.2|BM374239 EBpi03_SQ003_B01_R pistil, 4 DPA, no... 46 0.004
gb|BQ763089.1|BQ763089 EBro02_SQ007_L03_R root, 3 week, hyd... 46 0.004
gb|BE216076.2|BE216076 HV_CEb0009F11f Hordeum vulgare seedl... 44 0.015
gb|AV913940.1|AV913940 AV913940 K. Sato unpublished cDNA li... 44 0.015
gb|AV921554.1|AV921554 AV921554 K. Sato unpublished cDNA li... 44 0.015
gb|BQ464485.1|BQ464485 HF02G16r HF Hordeum vulgare subsp. v... 44 0.015
gb|BQ662213.1|BQ662213 HS01B18w HS Hordeum vulgare subsp. v... 44 0.015
gb|BQ662379.1|BQ662379 HS02B18u HS Hordeum vulgare subsp. v... 44 0.015
gb|BI777624.2|BI777624 EBro08_SQ001_A11_R root, 3 week, dro... 44 0.015
gb|CA000540.1|CA000540 HS07K15u HS Hordeum vulgare subsp. v... 44 0.015
gb|CA015912.1|CA015912 HV11G05u HV Hordeum vulgare subsp. v... 44 0.015
gb|CD662734.1|CD662734 UCRHV18_02dg12_b1 Drought-stressed D... 44 0.015
gb|AL450792.1|AL450792 AL450792 Hordeum vulgare Barke etiol... 42 0.059
gb|CA008519.1|CA008519 HU11D12r HU Hordeum vulgare subsp. v... 42 0.059
gb|AL499685.1|AL499685 AL499685 Hordeum vulgare Barke etiol... 40 0.23
gb|BF616111.2|BF616111 HVSMEc0003A13f Hordeum vulgare seedl... 40 0.23
gb|BI959501.1|BI959501 HVSMEn0019O18f Hordeum vulgare rachi... 40 0.23
gb|BE216060.2|BE216060 HV_CEb0009E14f Hordeum vulgare seedl... 40 0.23
gb|BG369741.2|BG369741 HVSMEi0025M09f Hordeum vulgare 20 DA... 40 0.23
gb|BE559469.2|BE559469 HV_CEb0024N15f Hordeum vulgare seedl... 40 0.23
gb|BI780780.2|BI780780 EBes01_SQ002_D01_R embryo sac, 4-6 D... 40 0.23
gb|BU979545.1|BU979545 HA16I01r HA Hordeum vulgare subsp. v... 40 0.23
gb|CA015426.1|CA015426 HT14E12r HT Hordeum vulgare subsp. v... 40 0.23
gb|CA015448.1|CA015448 HT14F13r HT Hordeum vulgare subsp. v... 40 0.23
gb|CB858189.1|CB858189 HI06B14w HI Hordeum vulgare subsp. v... 40 0.23
gb|CK125297.1|CK125297 BES1824107j24 BES1824 Hordeum vulgar... 40 0.23
>gb|BE559324.1|BE559324 HV_CEb0024B22f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0024B22f, mRNA sequence
Length = 938
Score = 543 bits (274), Expect = e-153
Identities = 521/600 (86%), Gaps = 13/600 (2%)
Strand = Plus / Minus
Query: 1042 cccttgcactcgttgcaaggatgctgcatttgctggatcattccagg-ccccaactgcct 1100
||| ||||||| ||||| || ||||||||| |||| |||||||| || ||||| ||||||
Sbjct: 689 cccntgcactcattgcagggctgctgcattngctgaatcattcctggtccccagctgcct 630
Query: 1101 gatttggaccttaaagccagaaccttggcaaccagcacacctcgatgaagctccagactt 1160
||| |||||||| | |||| ||||||||| || |||||| || ||||||||||||||
Sbjct: 629 gatctggaccttgtaaccagcaccttggcagccggcacacttcatggaagctccagactt 570
Query: 1161 tgaacccttaccattgcacttggagcagaggacactgcgggacagagagagcttctttga 1220
||||||||| ||||||||||| |||||||| ||| |||||| |||||||| ||||| ||
Sbjct: 569 tgaacccttgccattgcactttgagcagagcacattgcgggcaagagagagtttcttcga 510
Query: 1221 tgtgccattgtacaaatcctccagagaaaccttcagaggatgaaccacatcatctccccg 1280
||| ||||||||||| ||||| || |||||||||||||||||||||||| || ||||
Sbjct: 509 tgttccattgtacaactcctcaaggctaaccttcagaggatgaaccacatcctcacccct 450
Query: 1281 ccgttgccttctgcccctactgctg---ccacctccaaaagg---gcttccaccaccaaa 1334
|| || | |||||||| |||||| ||||||||||| || || |||||||||||
Sbjct: 449 gcgctgacgcctgcccctgctgctgccaccacctccaaaggggttgccaccaccaccaaa 390
Query: 1335 gaatgactggaatatgtcaaagggatcatgcatcccaccaccgcctcccattccctcctt 1394
|||||| ||||| |||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 389 gaatgattggaagatgtcaaatggatcatgcat---tccaccgcctcccattccctcctt 333
Query: 1395 gagggcatcctcaccatattggtcatagatctctctcttttcagggtcgctgaggacctc 1454
|||||||||||||||||| || ||||||||||||| ||| ||||| || || ||||||||
Sbjct: 332 gagggcatcctcaccatactgatcatagatctctcgcttctcaggatcactcaggacctc 273
Query: 1455 ataaccctgagctagctccttgaacttctcggggtcgccgcccttgtcggggtggttctt 1514
|||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 ataagcctgagctagttccttgaacttctcggggtcgccgcccttgtcggggtggttctt 213
Query: 1515 gatggcggccttgcggtaggccttcttgaggtcatcctgtgacgcgtccttggaaacccc 1574
||||||||||||||||||||||||||||||||| ||||| ||||||||||||| || ||
Sbjct: 212 gatggcggccttgcggtaggccttcttgaggtcgtcctgggacgcgtccttgggcacgcc 153
Query: 1575 caggatctcgtagtaccgggtgttgtcgctcttcttcggcg---cgcggccgaacatctc 1631
||||||||||||||| || ||| |||||||||||||||||| ||||||||||||||||
Sbjct: 152 caggatctcgtagtagcgcgtgctgtcgctcttcttcggcggcccgcggccgaacatctc 93
>gb|BU983194.1|BU983194 HA28N18r HA Hordeum vulgare subsp. vulgare cDNA clone HA28N18
5-PRIME, mRNA sequence
Length = 590
Score = 509 bits (257), Expect = e-143
Identities = 497/575 (86%), Gaps = 9/575 (1%)
Strand = Plus / Minus
Query: 1047 gcactcgttgcaaggatgctgcatttgctggatcattccaggccccaactgcctgatttg 1106
|||||| ||||| || |||||||||||||| |||||||| || |||| ||||||||| ||
Sbjct: 590 gcactcattgcagggctgctgcatttgctgtatcattcctggtcccagctgcctgatctg 531
Query: 1107 gaccttaaagccagaaccttggcaaccagcacacctcgatgaagctccagactttgaacc 1166
|||||| | |||| ||||||||| || |||||| || ||||| ||||||||||||||
Sbjct: 530 gaccttgtaaccagcaccttggcagccggcacacttcatggaagccccagactttgaacc 471
Query: 1167 cttaccattgcacttggagcagaggacactgcgggacagagagagcttctttgatgtgcc 1226
||| ||||||||||| |||||||| ||| |||||| |||||||| ||||| ||||| ||
Sbjct: 470 cttgccattgcactttgagcagagcacattgcgggcaagagagagtttcttcgatgttcc 411
Query: 1227 attgtacaaatcctccagagaaaccttcagaggatgaaccacatcatctccccgccgttg 1286
||||||||| ||||| || |||||||||||||||||||||||| || |||| || ||
Sbjct: 410 attgtacaactcctcaaggctaaccttcagaggatgaaccacatcctcacccctgcgctg 351
Query: 1287 ccttctgcccctactgctgccacctcca--aaagggctt----ccaccaccaaagaatga 1340
| |||||||| ||||||||||| || |||||| || |||||||||||||||||
Sbjct: 350 acgcctgcccctgctgctgccaccacctccaaaggggttgccgccaccaccaaagaatga 291
Query: 1341 ctggaatatgtcaaagggatcatgcatcccaccaccgcctcccattccctccttgagggc 1400
||||| |||||||| ||||| ||||| |||||||| |||||||||||||||||||||
Sbjct: 290 ttggaagatgtcaaatggatcgtgcattccaccacc---tcccattccctccttgagggc 234
Query: 1401 atcctcaccatattggtcatagatctctctcttttcagggtcgctgaggacctcataacc 1460
|||||||||||| || ||||||||||||| ||| ||||| || || | |||||||||| |
Sbjct: 233 atcctcaccatactgatcatagatctctcgcttctcaggatcactcaagacctcataagc 174
Query: 1461 ctgagctagctccttgaacttctcggggtcgccgcccttgtcggggtggttcttgatggc 1520
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 173 ctgagctagctccttgaacttctcggggtaaccgcccttgtcggggtggttcttgatggc 114
Query: 1521 ggccttgcggtaggccttcttgaggtcatcctgtgacgcgtccttggaaacccccaggat 1580
||||||||||||||||||||||||||| ||||| ||||||||||||| || ||||||||
Sbjct: 113 ggccttgcggtaggccttcttgaggtcgtcctgggacgcgtccttgggcacgcccaggat 54
Query: 1581 ctcgtagtaccgggtgttgtcgctcttcttcggcg 1615
||||||||| || ||| ||||||||||||||||||
Sbjct: 53 ctcgtagtagcgcgtgctgtcgctcttcttcggcg 19
>gb|CA013492.1|CA013492 HT08K04r HT Hordeum vulgare subsp. vulgare cDNA clone HT08K04
5-PRIME, mRNA sequence
Length = 626
Score = 505 bits (255), Expect = e-141
Identities = 488/563 (86%), Gaps = 12/563 (2%)
Strand = Plus / Minus
Query: 1078 atcattccaggccccaactgcctgatttggaccttaaagccagaaccttggcaaccagca 1137
|||||||| || |||| ||||||||| |||||||| | |||| ||||||||| || |||
Sbjct: 622 atcattcctggtcccagctgcctgatctggaccttgtaaccagcaccttggcagccggca 563
Query: 1138 cacctcgatgaagctccagactttgaacccttaccattgcacttggagcagaggacactg 1197
||| || ||||| ||||||||||||||||| ||||||||||| |||||||| ||| ||
Sbjct: 562 cacttcatggaagccccagactttgaacccttgccattgcactttgagcagagcacattg 503
Query: 1198 cgggacagagagagcttctttgatgtgccattgtacaaatcctccagagaaaccttcaga 1257
|||| |||||||| ||||| ||||| ||||||||||| ||||| || ||||||||||
Sbjct: 502 cgggcaagagagagtttcttcgatgttccattgtacaactcctcaaggctaaccttcaga 443
Query: 1258 ggatgaaccacatcatctccccgccgttgccttctgcccctactgctgccacctcca--a 1315
|||||||||||||| || |||| || || | |||||||| ||||||||||| || |
Sbjct: 442 ggatgaaccacatcctcacccctgcgctgacgcctgcccctgctgctgccaccacctcca 383
Query: 1316 aagggctt----ccaccaccaaagaatgactggaatatgtcaaagggatcatgcatccca 1371
||||| || ||||||||||||||||| ||||| |||||||| ||||| ||||| |||
Sbjct: 382 aaggggttgccgccaccaccaaagaatgattggaagatgtcaaatggatcgtgcattcca 323
Query: 1372 ccaccgcctcccattccctccttgagggcatcctcaccatattggtcatagatctctctc 1431
||||| ||||||||||||||||||||||||||||||||| || ||||||||||||| |
Sbjct: 322 ccacc---tcccattccctccttgagggcatcctcaccatactgatcatagatctctcgc 266
Query: 1432 ttttcagggtcgctgaggacctcataaccctgagctagctccttgaacttctcggggtcg 1491
|| ||||| || || | |||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 265 ttctcaggatcactcaagacctcataagcctgagctagctccttgaacttctcggggtcg 206
Query: 1492 ccgcccttgtcggggtggttcttgatggcggccttgcggtaggccttcttgaggtcatcc 1551
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 205 ccgcccttgtcggggtggttcttgatggcggccttgcggtaggccttcttgaggtcgtcc 146
Query: 1552 tgtgacgcgtccttggaaacccccaggatctcgtagtaccgggtgttgtcgctcttcttc 1611
|| ||||||||||||| || ||||||||||||||||| || ||| ||||||||||||||
Sbjct: 145 tgggacgcgtccttgggcacgcccaggatctcgtagtagcgcgtgctgtcgctcttcttc 86
Query: 1612 ggcg---cgcggccgaacatctc 1631
|||| ||||||||||||||||
Sbjct: 85 ggcggcccgcggccgaacatctc 63
>gb|AV932975.1|AV932975 AV932975 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal4o07 5', mRNA sequence
Length = 631
Score = 500 bits (252), Expect = e-140
Identities = 458/524 (87%), Gaps = 12/524 (2%)
Strand = Plus / Minus
Query: 1117 ccagaaccttggcaaccagcacacctcgatgaagctccagactttgaacccttaccattg 1176
|||| ||||||||| || |||||| || ||||||||||||||||||||||| ||||||
Sbjct: 630 ccagcaccttggcagccggcacacttcatggaagctccagactttgaacccttgccattg 571
Query: 1177 cacttggagcagaggacactgcgggacagagagagcttctttgatgtgccattgtacaaa 1236
||||| |||||||| ||| |||||| |||||||| ||||| ||||| |||||||||||
Sbjct: 570 cactttgagcagagcacattgcgggcaagagagagtttcttcgatgttccattgtacaac 511
Query: 1237 tcctccagagaaaccttcagaggatgaaccacatcatctccccgccgttgccttctgccc 1296
||||| || |||||||||||||||||||||||| || |||| || || | ||||||
Sbjct: 510 tcctcaaggctaaccttcagaggatgaaccacatcctcacccctgcgctgacgcctgccc 451
Query: 1297 ctactgctg---ccacctccaaaagg---gcttccaccaccaaagaatgactggaatatg 1350
|| |||||| ||||||||||| || || ||||||||||||||||| ||||| |||
Sbjct: 450 ctgctgctgccaccacctccaaaggggttgccaccaccaccaaagaatgattggaagatg 391
Query: 1351 tcaaagggatcatgcatcccaccaccgcctcccattccctccttgagggcatcctcacca 1410
||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 390 tcaaatggatcatgcat---tccaccgcctcccattccctccttgagggcatcctcacca 334
Query: 1411 tattggtcatagatctctctcttttcagggtcgctgaggacctcataaccctgagctagc 1470
|| || ||||||||||||| ||| ||||| || || |||||||||||| ||||||||||
Sbjct: 333 tactgatcatagatctctcgcttctcaggatcactcaggacctcataagcctgagctagt 274
Query: 1471 tccttgaacttctcggggtcgccgcccttgtcggggtggttcttgatggcggccttgcgg 1530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 tccttgaacttctcggggtcgccgcccttgtcggggtggttcttgatggcggccttgcgg 214
Query: 1531 taggccttcttgaggtcatcctgtgacgcgtccttggaaacccccaggatctcgtagtac 1590
||||||||||||||||| ||||| ||||||||||||| || |||||||||||||||||
Sbjct: 213 taggccttcttgaggtcgtcctgggacgcgtccttgggcacgcccaggatctcgtagtag 154
Query: 1591 cgggtgttgtcgctcttcttcggcg---cgcggccgaacatctc 1631
|| ||| |||||||||||||||||| ||||||||||||||||
Sbjct: 153 cgcgtgctgtcgctcttcttcggcggcccgcggccgaacatctc 110
>gb|BJ547556.1|BJ547556 BJ547556 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal31m24 5', mRNA sequence
Length = 630
Score = 500 bits (252), Expect = e-140
Identities = 458/524 (87%), Gaps = 12/524 (2%)
Strand = Plus / Minus
Query: 1117 ccagaaccttggcaaccagcacacctcgatgaagctccagactttgaacccttaccattg 1176
|||| ||||||||| || |||||| || ||||||||||||||||||||||| ||||||
Sbjct: 627 ccagcaccttggcagccggcacacttcatggaagctccagactttgaacccttgccattg 568
Query: 1177 cacttggagcagaggacactgcgggacagagagagcttctttgatgtgccattgtacaaa 1236
||||| |||||||| ||| |||||| |||||||| ||||| ||||| |||||||||||
Sbjct: 567 cactttgagcagagcacattgcgggcaagagagagtttcttcgatgttccattgtacaac 508
Query: 1237 tcctccagagaaaccttcagaggatgaaccacatcatctccccgccgttgccttctgccc 1296
||||| || |||||||||||||||||||||||| || |||| || || | ||||||
Sbjct: 507 tcctcaaggctaaccttcagaggatgaaccacatcctcacccctgcgctgacgcctgccc 448
Query: 1297 ctactgctg---ccacctccaaaagg---gcttccaccaccaaagaatgactggaatatg 1350
|| |||||| ||||||||||| || || ||||||||||||||||| ||||| |||
Sbjct: 447 ctgctgctgccaccacctccaaaggggttgccaccaccaccaaagaatgattggaagatg 388
Query: 1351 tcaaagggatcatgcatcccaccaccgcctcccattccctccttgagggcatcctcacca 1410
||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 387 tcaaatggatcatgcat---tccaccgcctcccattccctccttgagggcatcctcacca 331
Query: 1411 tattggtcatagatctctctcttttcagggtcgctgaggacctcataaccctgagctagc 1470
|| || ||||||||||||| ||| ||||| || || |||||||||||| ||||||||||
Sbjct: 330 tactgatcatagatctctcgcttctcaggatcactcaggacctcataagcctgagctagt 271
Query: 1471 tccttgaacttctcggggtcgccgcccttgtcggggtggttcttgatggcggccttgcgg 1530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 tccttgaacttctcggggtcgccgcccttgtcggggtggttcttgatggcggccttgcgg 211
Query: 1531 taggccttcttgaggtcatcctgtgacgcgtccttggaaacccccaggatctcgtagtac 1590
||||||||||||||||| ||||| ||||||||||||| || |||||||||||||||||
Sbjct: 210 taggccttcttgaggtcgtcctgggacgcgtccttgggcacgcccaggatctcgtagtag 151
Query: 1591 cgggtgttgtcgctcttcttcggcg---cgcggccgaacatctc 1631
|| ||| |||||||||||||||||| ||||||||||||||||
Sbjct: 150 cgcgtgctgtcgctcttcttcggcggcccgcggccgaacatctc 107
>gb|AV926309.1|AV926309 AV926309 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp. vulgare
cDNA clone basd18o07 5', mRNA sequence
Length = 619
Score = 496 bits (250), Expect = e-138
Identities = 435/494 (88%), Gaps = 12/494 (2%)
Strand = Plus / Minus
Query: 1147 gaagctccagactttgaacccttaccattgcacttggagcagaggacactgcgggacaga 1206
||||||||||||||||||||||| ||||||||||| |||||||| ||| |||||| |||
Sbjct: 600 gaagctccagactttgaacccttgccattgcactttgagcagagcacattgcgggcaaga 541
Query: 1207 gagagcttctttgatgtgccattgtacaaatcctccagagaaaccttcagaggatgaacc 1266
||||| ||||| ||||| ||||||||||| ||||| || |||||||||||||||||||
Sbjct: 540 gagagtttcttcgatgttccattgtacaactcctcaaggctaaccttcagaggatgaacc 481
Query: 1267 acatcatctccccgccgttgccttctgcccctactgctg---ccacctccaaaagg---g 1320
||||| || |||| || || | |||||||| |||||| ||||||||||| || |
Sbjct: 480 acatcctcacccctgcgctgacgcctgcccctgctgctgccaccacctccaaaggggttg 421
Query: 1321 cttccaccaccaaagaatgactggaatatgtcaaagggatcatgcatcccaccaccgcct 1380
| ||||||||||||||||| ||||| |||||||| ||||||||||| |||||||||
Sbjct: 420 ccaccaccaccaaagaatgattggaagatgtcaaatggatcatgcat---tccaccgcct 364
Query: 1381 cccattccctccttgagggcatcctcaccatattggtcatagatctctctcttttcaggg 1440
|||||||||||||||||||||||||||||||| || ||||||||||||| ||| |||||
Sbjct: 363 cccattccctccttgagggcatcctcaccatactgatcatagatctctcgcttctcagga 304
Query: 1441 tcgctgaggacctcataaccctgagctagctccttgaacttctcggggtcgccgcccttg 1500
|| || |||||||||||| |||||||||| ||||||||||||||||||||||||||||||
Sbjct: 303 tcactcaggacctcataagcctgagctagttccttgaacttctcggggtcgccgcccttg 244
Query: 1501 tcggggtggttcttgatggcggccttgcggtaggccttcttgaggtcatcctgtgacgcg 1560
||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 243 tcggggtggttcttgatggcggccttgcggtaggccttcttgaggtcgtcctgggacgcg 184
Query: 1561 tccttggaaacccccaggatctcgtagtaccgggtgttgtcgctcttcttcggcg---cg 1617
||||||| || ||||||||||||||||| || ||| |||||||||||||||||| ||
Sbjct: 183 tccttgggcacgcccaggatctcgtagtagcgcgtgctgtcgctcttcttcggcggcccg 124
Query: 1618 cggccgaacatctc 1631
||||||||||||||
Sbjct: 123 cggccgaacatctc 110
>gb|BJ547080.1|BJ547080 BJ547080 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal14i23 5', mRNA sequence
Length = 603
Score = 496 bits (250), Expect = e-138
Identities = 435/494 (88%), Gaps = 12/494 (2%)
Strand = Plus / Minus
Query: 1147 gaagctccagactttgaacccttaccattgcacttggagcagaggacactgcgggacaga 1206
||||||||||||||||||||||| ||||||||||| |||||||| ||| |||||| |||
Sbjct: 588 gaagctccagactttgaacccttgccattgcactttgagcagagcacattgcgggcaaga 529
Query: 1207 gagagcttctttgatgtgccattgtacaaatcctccagagaaaccttcagaggatgaacc 1266
||||| ||||| ||||| ||||||||||| ||||| || |||||||||||||||||||
Sbjct: 528 gagagtttcttcgatgttccattgtacaactcctcaaggctaaccttcagaggatgaacc 469
Query: 1267 acatcatctccccgccgttgccttctgcccctactgctg---ccacctccaaaagg---g 1320
||||| || |||| || || | |||||||| |||||| ||||||||||| || |
Sbjct: 468 acatcctcacccctgcgctgacgcctgcccctgctgctgccaccacctccaaaggggttg 409
Query: 1321 cttccaccaccaaagaatgactggaatatgtcaaagggatcatgcatcccaccaccgcct 1380
| ||||||||||||||||| ||||| |||||||| ||||||||||| |||||||||
Sbjct: 408 ccaccaccaccaaagaatgattggaagatgtcaaatggatcatgcat---tccaccgcct 352
Query: 1381 cccattccctccttgagggcatcctcaccatattggtcatagatctctctcttttcaggg 1440
|||||||||||||||||||||||||||||||| || ||||||||||||| ||| |||||
Sbjct: 351 cccattccctccttgagggcatcctcaccatactgatcatagatctctcgcttctcagga 292
Query: 1441 tcgctgaggacctcataaccctgagctagctccttgaacttctcggggtcgccgcccttg 1500
|| || |||||||||||| |||||||||| ||||||||||||||||||||||||||||||
Sbjct: 291 tcactcaggacctcataagcctgagctagttccttgaacttctcggggtcgccgcccttg 232
Query: 1501 tcggggtggttcttgatggcggccttgcggtaggccttcttgaggtcatcctgtgacgcg 1560
||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 231 tcggggtggttcttgatggcggccttgcggtaggccttcttgaggtcgtcctgggacgcg 172
Query: 1561 tccttggaaacccccaggatctcgtagtaccgggtgttgtcgctcttcttcggcg---cg 1617
||||||| || ||||||||||||||||| || ||| |||||||||||||||||| ||
Sbjct: 171 tccttgggcacgcccaggatctcgtagtagcgcgtgctgtcgctcttcttcggcggcccg 112
Query: 1618 cggccgaacatctc 1631
||||||||||||||
Sbjct: 111 cggccgaacatctc 98
>gb|AV924641.1|AV924641 AV924641 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp. vulgare
cDNA clone basd16f23 5', mRNA sequence
Length = 512
Score = 490 bits (247), Expect = e-137
Identities = 432/491 (87%), Gaps = 12/491 (2%)
Strand = Plus / Minus
Query: 1150 gctccagactttgaacccttaccattgcacttggagcagaggacactgcgggacagagag 1209
|||||||||||||||||||| ||||||||||| |||||||| ||| |||||| ||||||
Sbjct: 512 gctccagactttgaacccttgccattgcactttgagcagagcacattgcgggcaagagag 453
Query: 1210 agcttctttgatgtgccattgtacaaatcctccagagaaaccttcagaggatgaaccaca 1269
|| ||||| ||||| ||||||||||| ||||| || ||||||||||||||||||||||
Sbjct: 452 agtttcttcgatgttccattgtacaactcctcaaggctaaccttcagaggatgaaccaca 393
Query: 1270 tcatctccccgccgttgccttctgcccctactgctg---ccacctccaaaagg---gctt 1323
|| || |||| || || | |||||||| |||||| ||||||||||| || ||
Sbjct: 392 tcctcacccctgcgctgacgcctgcccctgctgctgccaccacctccaaaggggttgcca 333
Query: 1324 ccaccaccaaagaatgactggaatatgtcaaagggatcatgcatcccaccaccgcctccc 1383
||||||||||||||||| ||||| |||||||| ||||||||||| ||||||||||||
Sbjct: 332 ccaccaccaaagaatgattggaagatgtcaaatggatcatgcat---tccaccgcctccc 276
Query: 1384 attccctccttgagggcatcctcaccatattggtcatagatctctctcttttcagggtcg 1443
||||||||||||||||||||||||||||| || ||||||||||||| ||| ||||| ||
Sbjct: 275 attccctccttgagggcatcctcaccatactgatcatagatctctcgcttctcaggatca 216
Query: 1444 ctgaggacctcataaccctgagctagctccttgaacttctcggggtcgccgcccttgtcg 1503
|| |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 215 ctcaggacctcataagcctgagctagttccttgaacttctcggggtcgccgcccttgtcg 156
Query: 1504 gggtggttcttgatggcggccttgcggtaggccttcttgaggtcatcctgtgacgcgtcc 1563
|||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 155 gggtggttcttgatggcggccttgcggtaggccttcttgaggtcgtcctgggacgcgtcc 96
Query: 1564 ttggaaacccccaggatctcgtagtaccgggtgttgtcgctcttcttcggcg---cgcgg 1620
|||| || ||||||||||||||||| || ||| |||||||||||||||||| |||||
Sbjct: 95 ttgggcacgcccaggatctcgtagtagcgcgtgctgtcgctcttcttcggcggcccgcgg 36
Query: 1621 ccgaacatctc 1631
|||||||||||
Sbjct: 35 ccgaacatctc 25
>gb|BF265760.2|BF265760 HV_CEa0013E07f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0013E07f, mRNA sequence
Length = 757
Score = 488 bits (246), Expect = e-136
Identities = 434/494 (87%), Gaps = 12/494 (2%)
Strand = Plus / Minus
Query: 1147 gaagctccagactttgaacccttaccattgcacttggagcagaggacactgcgggacaga 1206
||||||||||||||||||||||| ||||||||||| |||||||| ||| |||||| |||
Sbjct: 589 gaagctccagactttgaacccttgccattgcactttgagcagagcacattgcgggcaaga 530
Query: 1207 gagagcttctttgatgtgccattgtacaaatcctccagagaaaccttcagaggatgaacc 1266
||||| ||||| ||||| ||||||||||| ||||| || |||||||||||||||| ||
Sbjct: 529 gagagtttcttcgatgttccattgtacaactcctcaaggctaaccttcagaggatgagcc 470
Query: 1267 acatcatctccccgccgttgccttctgcccctactgctg---ccacctccaaaagg---g 1320
||||| || |||| || || | |||||||| |||||| ||||||||||| || |
Sbjct: 469 acatcctcacccctgcggtgacgcctgcccctgctgctgccaccacctccaaaggggttg 410
Query: 1321 cttccaccaccaaagaatgactggaatatgtcaaagggatcatgcatcccaccaccgcct 1380
| ||||||||||||||||| ||||| |||||||| ||||||||||| |||||||||
Sbjct: 409 ccaccaccaccaaagaatgattggaagatgtcaaatggatcatgcat---tccaccgcct 353
Query: 1381 cccattccctccttgagggcatcctcaccatattggtcatagatctctctcttttcaggg 1440
|||||||||||||||||||||||||||||||| || ||||||||||||| ||| |||||
Sbjct: 352 cccattccctccttgagggcatcctcaccatactgatcatagatctctcgcttctcagga 293
Query: 1441 tcgctgaggacctcataaccctgagctagctccttgaacttctcggggtcgccgcccttg 1500
|| || |||||||||||| |||||||||| ||||||||||||||||||||||||||||||
Sbjct: 292 tcactcaggacctcataagcctgagctagttccttgaacttctcggggtcgccgcccttg 233
Query: 1501 tcggggtggttcttgatggcggccttgcggtaggccttcttgaggtcatcctgtgacgcg 1560
||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 232 tcggggtggttcttgatggcggccttgcggtaggccttcttgaggtcgtcctgggacgcg 173
Query: 1561 tccttggaaacccccaggatctcgtagtaccgggtgttgtcgctcttcttcggcg---cg 1617
||||||| || ||||||||||||||||| || ||| |||||||||||||||||| ||
Sbjct: 172 tccttgggcacgcccaggatctcgtagtagcgcgtgctgtcgctcttcttcggcggcccg 113
Query: 1618 cggccgaacatctc 1631
||||||||||||||
Sbjct: 112 cggccgaacatctc 99
>gb|BQ767061.1|BQ767061 EBro08_SQ007_I24_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ007_I24 5', mRNA sequence
Length = 580
Score = 480 bits (242), Expect = e-134
Identities = 433/494 (87%), Gaps = 12/494 (2%)
Strand = Plus / Minus
Query: 1147 gaagctccagactttgaacccttaccattgcacttggagcagaggacactgcgggacaga 1206
||||| ||||||||||||||||| ||||||||||| |||||||| ||| |||||| |||
Sbjct: 562 gaagccccagactttgaacccttgccattgcactttgagcagagcacattgcgggcaaga 503
Query: 1207 gagagcttctttgatgtgccattgtacaaatcctccagagaaaccttcagaggatgaacc 1266
||||| ||||| ||||| ||||||||||| ||||| || |||||||||||||||||||
Sbjct: 502 gagagtttcttcgatgttccattgtacaactcctcaaggctaaccttcagaggatgaacc 443
Query: 1267 acatcatctccccgccgttgccttctgcccctactgctgccacctcca--aaagggctt- 1323
||||| || |||| || || | |||||||| ||||||||||| || |||||| ||
Sbjct: 442 acatcctcacccctgcgctgacgcctgcccctgctgctgccaccacctccaaaggggttg 383
Query: 1324 ---ccaccaccaaagaatgactggaatatgtcaaagggatcatgcatcccaccaccgcct 1380
||||||||||||||||| ||||| |||||||| ||||| ||||| |||||||| |
Sbjct: 382 ccgccaccaccaaagaatgattggaagatgtcaaatggatcgtgcattccaccacc---t 326
Query: 1381 cccattccctccttgagggcatcctcaccatattggtcatagatctctctcttttcaggg 1440
|||||||||||||||||||||||||||||||| || ||||||||||||| ||| |||||
Sbjct: 325 cccattccctccttgagggcatcctcaccatactgatcatagatctctcgcttctcagga 266
Query: 1441 tcgctgaggacctcataaccctgagctagctccttgaacttctcggggtcgccgcccttg 1500
|| || | |||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tcactcaagacctcataagcctgagctagctccttgaacttctcggggtcgccgcccttg 206
Query: 1501 tcggggtggttcttgatggcggccttgcggtaggccttcttgaggtcatcctgtgacgcg 1560
||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 205 tcggggtggttcttgatggcggccttgcggtaggccttcttgaggtcgtcctgggacgcg 146
Query: 1561 tccttggaaacccccaggatctcgtagtaccgggtgttgtcgctcttcttcggcg---cg 1617
||||||| || ||||||||||||||||| || ||| |||||||||||||||||| ||
Sbjct: 145 tccttgggcacgcccaggatctcgtagtagcgcgtgctgtcgctcttcttcggcggcccg 86
Query: 1618 cggccgaacatctc 1631
||||||||||||||
Sbjct: 85 cggccgaacatctc 72
>gb|BI776717.2|BI776717 EBpi07_SQ001_I13_R pistil, 12 DPA, no treatment, cv Optic, EBpi07
Hordeum vulgare subsp. vulgare cDNA clone
EBpi07_SQ001_I13 5', mRNA sequence
Length = 575
Score = 476 bits (240), Expect = e-132
Identities = 428/488 (87%), Gaps = 12/488 (2%)
Strand = Plus / Minus
Query: 1153 ccagactttgaacccttaccattgcacttggagcagaggacactgcgggacagagagagc 1212
||||||||||||||||| ||||||||||| |||||||| ||| |||||| ||||||||
Sbjct: 572 ccagactttgaacccttgccattgcactttgagcagagcacattgcgggcaagagagagt 513
Query: 1213 ttctttgatgtgccattgtacaaatcctccagagaaaccttcagaggatgaaccacatca 1272
||||| ||||| ||||||||||| ||||| || ||||||||||||||||||||||||
Sbjct: 512 ttcttcgatgttccattgtacaactcctcaaggctaaccttcagaggatgaaccacatcc 453
Query: 1273 tctccccgccgttgccttctgcccctactgctgccacctcca--aaagggctt----cca 1326
|| |||| || || | |||||||| ||||||||||| || |||||| || |||
Sbjct: 452 tcacccctgcgctgacgcctgcccctgctgctgccaccacctccaaaggggttgccgcca 393
Query: 1327 ccaccaaagaatgactggaatatgtcaaagggatcatgcatcccaccaccgcctcccatt 1386
|||||||||||||| ||||| |||||||| ||||| ||||| |||||||| |||||||
Sbjct: 392 ccaccaaagaatgattggaagatgtcaaatggatcgtgcattccaccacc---tcccatt 336
Query: 1387 ccctccttgagggcatcctcaccatattggtcatagatctctctcttttcagggtcgctg 1446
|||||||||||||||||||||||||| || ||||||||||||| ||| ||||| || ||
Sbjct: 335 ccctccttgagggcatcctcaccatactgatcatagatctctcgcttctcaggatcactc 276
Query: 1447 aggacctcataaccctgagctagctccttgaacttctcggggtcgccgcccttgtcgggg 1506
| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 aagacctcataagcctgagctagctccttgaacttctcggggtcgccgcccttgtcgggg 216
Query: 1507 tggttcttgatggcggccttgcggtaggccttcttgaggtcatcctgtgacgcgtccttg 1566
||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 215 tggttcttgatggcggccttgcggtaggccttcttgaggtcgtcctgggacgcgtccttg 156
Query: 1567 gaaacccccaggatctcgtagtaccgggtgttgtcgctcttcttcggcg---cgcggccg 1623
| || ||||||||||||||||| || ||| |||||||||||||||||| ||||||||
Sbjct: 155 ggcacgcccaggatctcgtagtagcgcgtgctgtcgctcttcttcggcggcccgcggccg 96
Query: 1624 aacatctc 1631
||||||||
Sbjct: 95 aacatctc 88
>gb|BJ547912.1|BJ547912 BJ547912 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal41i05 5', mRNA sequence
Length = 722
Score = 476 bits (240), Expect = e-132
Identities = 538/636 (84%), Gaps = 6/636 (0%)
Strand = Plus / Minus
Query: 375 ctactgctgggcgcactgcaccctctgcgcgccgcc---cggcatgtcctcatcctcgtc 431
|||||||||||||||||||||||||||| ||||||| |||||| ||||| ||||||||
Sbjct: 691 ctactgctgggcgcactgcaccctctgcccgccgccgcccggcatatcctcgtcctcgtc 632
Query: 432 gtaggcctcctgg---tgctgctgctgccgcctccgcatctccgcttcgatgttcacgtc 488
||||||||||| ||||||||||| ||||||||||||| | || |||| | ||
Sbjct: 631 ataggcctcctgcgcctgctgctgctgttgcctccgcatctcttcctcaatgtctatatc 572
Query: 489 atagggcatcgtctcctcgcactcgtccagctccatgtcggtgtactgcgacaccggctt 548
|||| ||||||||||||||||||||| ||||||||||| ||||||||||| |||||||
Sbjct: 571 gtaggccatcgtctcctcgcactcgtctagctccatgtctgtgtactgcgatgccggctt 512
Query: 549 gggcgggagcacagcctccagggccttgcactgctccgggctcagcgagtccgggaactc 608
||||||||| || | ||| |||||||||||||| ||| |||||||||||| ||||| |
Sbjct: 511 gggcgggaggaccgtctcgagggccttgcactggtccaagctcagcgagtcggggaaaac 452
Query: 609 caccgagaagtggatgtacagcttgcccttcatgaacggcctctggtacatgggcatgcc 668
||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 451 caccgtgaagtggatgtagagcttgcccttcatgaagggcctctggtacatgggcatgcc 392
Query: 669 ttcgtcgttgatcgccttgaaagaatcaggcttcacaacttcgcccggatttgatttgat 728
|||||||||||||||||||| ||||||||||| |||||||| || || || || |||||
Sbjct: 391 ctcgtcgttgatcgccttgaatgaatcaggcttgacaacttccccggggttggacttgat 332
Query: 729 cagcagctgcctgttatccaagtgagtcacaacaaactggaagccacacagagattcagt 788
|||||||| ||| |||||| |||| | ||| | ||||||||||| || | || ||
Sbjct: 331 gagcagctgtctgccatccaaatgagctaggacatattggaagccacagagggcctccgt 272
Query: 789 caaggtcagggtgtgctcgtagaagaggtcatcaccctttctcttgaacttgggatgctc 848
|| ||||||||||||||| ||||||||||| ||| |||| | |||||| ||||| |||||
Sbjct: 271 cagggtcagggtgtgctcatagaagaggtcgtcagccttccgcttgaatttggggtgctc 212
Query: 849 cttctgctggagaacaaagatgatatctccagtgacagtgtcaggcgcttcatcagcttc 908
|||||||||||| || ||||| || ||||||||||| || |||||||||||||| || ||
Sbjct: 211 cttctgctggaggacgaagattatgtctccagtgacggtatcaggcgcttcatctgcctc 152
Query: 909 accagggaatgtgatcttctgcccattctgcatgcctttctccacaaacacttcaagaac 968
|||||||| ||||||||||| |||| |||||| || ||||| || | ||| || || ||
Sbjct: 151 gccagggaaggtgatcttctgtccatgctgcatacccttctcgaccaccacctccaggac 92
Query: 969 cttcttctcctgcacaactttatcacccttgcactg 1004
|||||||| || || || || ||||||||||||||
Sbjct: 91 tttcttctcgtgaaccaccttctcacccttgcactg 56
>gb|AL507668.1|AL507668 AL507668 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY06I06V 5',
mRNA sequence
Length = 700
Score = 474 bits (239), Expect = e-132
Identities = 432/494 (87%), Gaps = 12/494 (2%)
Strand = Plus / Minus
Query: 1147 gaagctccagactttgaacccttaccattgcacttggagcagaggacactgcgggacaga 1206
||||| ||||||||||||||||| ||||||||||| |||||||| ||| |||||| |||
Sbjct: 576 gaagccccagactttgaacccttgccattgcactttgagcagagcacattgcgggcaaga 517
Query: 1207 gagagcttctttgatgtgccattgtacaaatcctccagagaaaccttcagaggatgaacc 1266
||||| || || ||||| ||||||||||| ||||| || |||||||||||||||||||
Sbjct: 516 gagagtttnttcgatgttccattgtacaactcctcaaggctaaccttcagaggatgaacc 457
Query: 1267 acatcatctccccgccgttgccttctgcccctactgctgccacctcca--aaagggctt- 1323
||||| || |||| || || | |||||||| ||||||||||| || |||||| ||
Sbjct: 456 acatcctcacccctgcgctgacgcctgcccctgctgctgccaccacctccaaaggggttg 397
Query: 1324 ---ccaccaccaaagaatgactggaatatgtcaaagggatcatgcatcccaccaccgcct 1380
||||||||||||||||| ||||| |||||||| ||||| ||||| |||||||| |
Sbjct: 396 ccgccaccaccaaagaatgattggaagatgtcaaatggatcgtgcattccaccacc---t 340
Query: 1381 cccattccctccttgagggcatcctcaccatattggtcatagatctctctcttttcaggg 1440
|||||||||||||||||||||||||||||||| || ||||||||||||| ||| |||||
Sbjct: 339 cccattccctccttgagggcatcctcaccatactgatcatagatctctcgcttctcagga 280
Query: 1441 tcgctgaggacctcataaccctgagctagctccttgaacttctcggggtcgccgcccttg 1500
|| || | |||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 tcactcaagacctcataagcctgagctagctccttgaacttctcggggtcgccgcccttg 220
Query: 1501 tcggggtggttcttgatggcggccttgcggtaggccttcttgaggtcatcctgtgacgcg 1560
||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 219 tcggggtggttcttgatggcggccttgcggtaggccttcttgaggtcgtcctgggacgcg 160
Query: 1561 tccttggaaacccccaggatctcgtagtaccgggtgttgtcgctcttcttcggcg---cg 1617
||||||| || ||||||||||||||||| || ||| |||||||||||||||||| ||
Sbjct: 159 tccttgggcacgcccaggatctcgtagtagcgcgtgctgtcgctcttcttcggcggcccg 100
Query: 1618 cggccgaacatctc 1631
||||||||||||||
Sbjct: 99 cggccgaacatctc 86
>gb|BJ547588.1|BJ547588 BJ547588 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal32k04 5', mRNA sequence
Length = 587
Score = 474 bits (239), Expect = e-132
Identities = 456/525 (86%), Gaps = 13/525 (2%)
Strand = Plus / Minus
Query: 1117 ccagaaccttggcaaccagcacacctcgatgaagctccagactttgaacccttaccattg 1176
|||| ||||||||| || |||||| || ||||||||||||||||||||||| ||||||
Sbjct: 585 ccagcaccttggcagccggcacacttcatggaagctccagactttgaacccttgccattg 526
Query: 1177 cacttggagcagaggacactgcgggacagagagagcttctttgatgtgccattgtacaaa 1236
||||| |||||||| ||| |||||| |||||||| ||||| ||||| |||||||||||
Sbjct: 525 cactttgagcagagcacattgcgggcaagagagagtttcttcgatgttccattgtacaac 466
Query: 1237 tcctccagagaaaccttcagaggatgaaccacatcatctccccgccgttgccttctgccc 1296
||||| || |||||||||||||||||||||||| || |||| || || | ||||||
Sbjct: 465 tcctcaaggctaaccttcagaggatgaaccacatcctcacccctgcgctgacgcctgccc 406
Query: 1297 ctactgctg---ccacctccaaaagg---gcttccaccaccaaagaatgactggaatatg 1350
|| |||||| ||||||||||| || || ||||||||||||||||| ||||| |||
Sbjct: 405 ctgctgctgccaccacctccaaaggggttgccaccaccaccaaagaatgattggaagatg 346
Query: 1351 tcaaagggatcatgcatcccaccaccgcctcccattccctccttgagggcatcctcacca 1410
||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 345 tcaaatggatcatgcat---tccaccgcctcccattccctccttgagggcatcctcacca 289
Query: 1411 tattggtcatagatctctctcttttcagggtcgctgaggacctcataaccctgagctagc 1470
|| || ||||||||||||| ||| ||||| || || |||||||||||| ||||||||||
Sbjct: 288 tactgatcatagatctctcgcttctcaggatcactcaggacctcataagcctgagctagt 229
Query: 1471 tccttgaacttctcggggtcgccgcccttgtcggggtggttcttgatggcggccttgcgg 1530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 tccttgaacttctcggggtcgccgcccttgtcggggtggttcttgatggcggccttgcgg 169
Query: 1531 taggccttcttgaggtcatcctgtgacgcgtccttggaaacccccaggatctc-gtagta 1589
||||||||||||||||| ||||| ||||||||||||| || |||||||||| ||||||
Sbjct: 168 taggccttcttgaggtcgtcctgggacgcgtccttgggcacgcccaggatctntgtagta 109
Query: 1590 ccgggtgttgtcgctcttcttcggcg---cgcggccgaacatctc 1631
|| ||| ||||||||||||||| || ||||||||||||||||
Sbjct: 108 gcgcgtgctgtcgctcttcttcgncggcccgcggccgaacatctc 64
>gb|BJ548555.1|BJ548555 BJ548555 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal30b23 3', mRNA sequence
Length = 667
Score = 464 bits (234), Expect = e-129
Identities = 496/582 (85%), Gaps = 6/582 (1%)
Strand = Plus / Plus
Query: 375 ctactgctgggcgcactgcaccctctgcgcgccgcc---cggcatgtcctcatcctcgtc 431
|||||||||||||||||||||||||||| ||||||| |||||| ||||| ||||||||
Sbjct: 85 ctactgctgggcgcactgcaccctctgcccgccgccgcccggcatatcctcgtcctcgtc 144
Query: 432 gtaggcctcctgg---tgctgctgctgccgcctccgcatctccgcttcgatgttcacgtc 488
||||||||||| ||||||||||| ||||||||||||| | || |||| | ||
Sbjct: 145 ataggcctcctgcgcctgctgctgctgttgcctccgcatctcttcctcaatgtctatatc 204
Query: 489 atagggcatcgtctcctcgcactcgtccagctccatgtcggtgtactgcgacaccggctt 548
|||| ||||||||||||||||||||| ||||||||||| ||||||||||| |||||||
Sbjct: 205 gtaggccatcgtctcctcgcactcgtctagctccatgtctgtgtactgcgatgccggctt 264
Query: 549 gggcgggagcacagcctccagggccttgcactgctccgggctcagcgagtccgggaactc 608
||||||||| || | ||| |||||||||||||| ||| |||||||||||| ||||| |
Sbjct: 265 gggcgggaggaccgtctcgagggccttgcactggtccaagctcagcgagtcggggaaaac 324
Query: 609 caccgagaagtggatgtacagcttgcccttcatgaacggcctctggtacatgggcatgcc 668
||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 325 caccgtgaagtggatgtagagcttgcccttcatgaagggcctctggtacatgggcatgcc 384
Query: 669 ttcgtcgttgatcgccttgaaagaatcaggcttcacaacttcgcccggatttgatttgat 728
|||||||||||||||||||| ||||||||||| |||||||| || || || || |||||
Sbjct: 385 ctcgtcgttgatcgccttgaatgaatcaggcttgacaacttccccggggttggacttgat 444
Query: 729 cagcagctgcctgttatccaagtgagtcacaacaaactggaagccacacagagattcagt 788
|||||||| ||| |||||| |||| | ||| | ||||||||||| || | || ||
Sbjct: 445 gagcagctgtctgccatccaaatgagctaggacatattggaagccacagagggcctccgt 504
Query: 789 caaggtcagggtgtgctcgtagaagaggtcatcaccctttctcttgaacttgggatgctc 848
|| ||||||||||||||| ||||||||||| ||| |||| | |||||| ||||| |||||
Sbjct: 505 cagggtcagggtgtgctcatagaagaggtcgtcagccttccgcttgaatttggggtgctc 564
Query: 849 cttctgctggagaacaaagatgatatctccagtgacagtgtcaggcgcttcatcagcttc 908
|||||||||||| || ||||| || ||||||||||| || |||||||||||||| || ||
Sbjct: 565 cttctgctggaggacgaagattatgtctccagtgacggtatcaggcgcttcatctgcctc 624
Query: 909 accagggaatgtgatcttctgcccattctgcatgcctttctc 950
|||||||| ||||||||||| |||| |||||| || |||||
Sbjct: 625 gccagggaaggtgatcttctgtccatgctgcatacccttctc 666
>gb|BJ548639.1|BJ548639 BJ548639 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal31m24 3', mRNA sequence
Length = 668
Score = 464 bits (234), Expect = e-129
Identities = 496/582 (85%), Gaps = 6/582 (1%)
Strand = Plus / Plus
Query: 375 ctactgctgggcgcactgcaccctctgcgcgccgcc---cggcatgtcctcatcctcgtc 431
|||||||||||||||||||||||||||| ||||||| |||||| ||||| ||||||||
Sbjct: 86 ctactgctgggcgcactgcaccctctgcccgccgccgcccggcatatcctcgtcctcgtc 145
Query: 432 gtaggcctcctgg---tgctgctgctgccgcctccgcatctccgcttcgatgttcacgtc 488
||||||||||| ||||||||||| ||||||||||||| | || |||| | ||
Sbjct: 146 ataggcctcctgcgcctgctgctgctgttgcctccgcatctcttcctcaatgtctatatc 205
Query: 489 atagggcatcgtctcctcgcactcgtccagctccatgtcggtgtactgcgacaccggctt 548
|||| ||||||||||||||||||||| ||||||||||| ||||||||||| |||||||
Sbjct: 206 gtaggccatcgtctcctcgcactcgtctagctccatgtctgtgtactgcgatgccggctt 265
Query: 549 gggcgggagcacagcctccagggccttgcactgctccgggctcagcgagtccgggaactc 608
||||||||| || | ||| |||||||||||||| ||| |||||||||||| ||||| |
Sbjct: 266 gggcgggaggaccgtctcgagggccttgcactggtccaagctcagcgagtcggggaaaac 325
Query: 609 caccgagaagtggatgtacagcttgcccttcatgaacggcctctggtacatgggcatgcc 668
||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 326 caccgtgaagtggatgtagagcttgcccttcatgaagggcctctggtacatgggcatgcc 385
Query: 669 ttcgtcgttgatcgccttgaaagaatcaggcttcacaacttcgcccggatttgatttgat 728
|||||||||||||||||||| ||||||||||| |||||||| || || || || |||||
Sbjct: 386 ctcgtcgttgatcgccttgaatgaatcaggcttgacaacttccccggggttggacttgat 445
Query: 729 cagcagctgcctgttatccaagtgagtcacaacaaactggaagccacacagagattcagt 788
|||||||| ||| |||||| |||| | ||| | ||||||||||| || | || ||
Sbjct: 446 gagcagctgtctgccatccaaatgagctaggacatattggaagccacagagggcctccgt 505
Query: 789 caaggtcagggtgtgctcgtagaagaggtcatcaccctttctcttgaacttgggatgctc 848
|| ||||||||||||||| ||||||||||| ||| |||| | |||||| ||||| |||||
Sbjct: 506 cagggtcagggtgtgctcatagaagaggtcgtcagccttccgcttgaatttggggtgctc 565
Query: 849 cttctgctggagaacaaagatgatatctccagtgacagtgtcaggcgcttcatcagcttc 908
|||||||||||| || ||||| || ||||||||||| || |||||||||||||| || ||
Sbjct: 566 cttctgctggaggacgaagattatgtctccagtgacggtatcaggcgcttcatctgcctc 625
Query: 909 accagggaatgtgatcttctgcccattctgcatgcctttctc 950
|||||||| ||||||||||| |||| |||||| || |||||
Sbjct: 626 gccagggaaggtgatcttctgtccatgctgcatacccttctc 667
>gb|BJ549776.1|BJ549776 BJ549776 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags31o09 3', mRNA sequence
Length = 668
Score = 464 bits (234), Expect = e-129
Identities = 496/582 (85%), Gaps = 6/582 (1%)
Strand = Plus / Plus
Query: 375 ctactgctgggcgcactgcaccctctgcgcgccgcc---cggcatgtcctcatcctcgtc 431
|||||||||||||||||||||||||||| ||||||| |||||| ||||| ||||||||
Sbjct: 85 ctactgctgggcgcactgcaccctctgcccgccgccgcccggcatatcctcgtcctcgtc 144
Query: 432 gtaggcctcctgg---tgctgctgctgccgcctccgcatctccgcttcgatgttcacgtc 488
||||||||||| ||||||||||| ||||||||||||| | || |||| | ||
Sbjct: 145 ataggcctcctgcgcctgctgctgctgttgcctccgcatctcttcctcaatgtctatatc 204
Query: 489 atagggcatcgtctcctcgcactcgtccagctccatgtcggtgtactgcgacaccggctt 548
|||| ||||||||||||||||||||| ||||||||||| ||||||||||| |||||||
Sbjct: 205 gtaggccatcgtctcctcgcactcgtctagctccatgtctgtgtactgcgatgccggctt 264
Query: 549 gggcgggagcacagcctccagggccttgcactgctccgggctcagcgagtccgggaactc 608
||||||||| || | ||| |||||||||||||| ||| |||||||||||| ||||| |
Sbjct: 265 gggcgggaggaccgtctcgagggccttgcactggtccaagctcagcgagtcggggaaaac 324
Query: 609 caccgagaagtggatgtacagcttgcccttcatgaacggcctctggtacatgggcatgcc 668
||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 325 caccgtgaagtggatgtagagcttgcccttcatgaagggcctctggtacatgggcatgcc 384
Query: 669 ttcgtcgttgatcgccttgaaagaatcaggcttcacaacttcgcccggatttgatttgat 728
|||||||||||||||||||| ||||||||||| |||||||| || || || || |||||
Sbjct: 385 ctcgtcgttgatcgccttgaatgaatcaggcttgacaacttccccggggttggacttgat 444
Query: 729 cagcagctgcctgttatccaagtgagtcacaacaaactggaagccacacagagattcagt 788
|||||||| ||| |||||| |||| | ||| | ||||||||||| || | || ||
Sbjct: 445 gagcagctgtctgccatccaaatgagctaggacatattggaagccacagagggcctccgt 504
Query: 789 caaggtcagggtgtgctcgtagaagaggtcatcaccctttctcttgaacttgggatgctc 848
|| ||||||||||||||| ||||||||||| ||| |||| | |||||| ||||| |||||
Sbjct: 505 cagggtcagggtgtgctcatagaagaggtcgtcagccttccgcttgaatttggggtgctc 564
Query: 849 cttctgctggagaacaaagatgatatctccagtgacagtgtcaggcgcttcatcagcttc 908
|||||||||||| || ||||| || ||||||||||| || |||||||||||||| || ||
Sbjct: 565 cttctgctggaggacgaagattatgtctccagtgacggtatcaggcgcttcatctgcctc 624
Query: 909 accagggaatgtgatcttctgcccattctgcatgcctttctc 950
|||||||| ||||||||||| |||| |||||| || |||||
Sbjct: 625 gccagggaaggtgatcttctgtccatgctgcatacccttctc 666
>gb|AV932812.1|AV932812 AV932812 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal4d04 5', mRNA sequence
Length = 697
Score = 462 bits (233), Expect = e-128
Identities = 538/637 (84%), Gaps = 7/637 (1%)
Strand = Plus / Minus
Query: 375 ctactgctgggcgcactgca-ccctctgcgcgccgcc---cggcatgtcctcatcctcgt 430
|||||||||||||||||||| |||||||| ||||||| |||||| ||||| |||||||
Sbjct: 694 ctactgctgggcgcactgcaaccctctgcccgccgccgcccggcatatcctcgtcctcgt 635
Query: 431 cgtaggcctcctgg---tgctgctgctgccgcctccgcatctccgcttcgatgttcacgt 487
| ||||||||||| ||||||||||| ||||||||||||| | || |||| | |
Sbjct: 634 cataggcctcctgcgcctgctgctgctgttgcctccgcatctcttcctcaatgtctatat 575
Query: 488 catagggcatcgtctcctcgcactcgtccagctccatgtcggtgtactgcgacaccggct 547
| |||| ||||||||||||||||||||| ||||||||||| ||||||||||| ||||||
Sbjct: 574 cgtaggccatcgtctcctcgcactcgtctagctccatgtctgtgtactgcgatgccggct 515
Query: 548 tgggcgggagcacagcctccagggccttgcactgctccgggctcagcgagtccgggaact 607
|||||||||| || | ||| |||||||||||||| ||| |||||||||||| |||||
Sbjct: 514 tgggcgggaggaccgtctcgagggccttgcactggtccaagctcagcgagtcggggaaaa 455
Query: 608 ccaccgagaagtggatgtacagcttgcccttcatgaacggcctctggtacatgggcatgc 667
|||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 454 ccaccgtgaagtggatgtagagcttgcccttcatgaagggcctctggtacatgggcatgc 395
Query: 668 cttcgtcgttgatcgccttgaaagaatcaggcttcacaacttcgcccggatttgatttga 727
| |||||||||||||||||||| ||||||||||| |||||||| || || || || ||||
Sbjct: 394 cctcgtcgttgatcgccttgaatgaatcaggcttgacaacttccccggggttggacttga 335
Query: 728 tcagcagctgcctgttatccaagtgagtcacaacaaactggaagccacacagagattcag 787
| |||||||| ||| |||||| |||| | ||| | ||||||||||| || | || |
Sbjct: 334 tgagcagctgtctgccatccaaatgagctaggacatattggaagccacagagggcctccg 275
Query: 788 tcaaggtcagggtgtgctcgtagaagaggtcatcaccctttctcttgaacttgggatgct 847
||| ||||||||||||||| ||||||||||| ||| |||| | |||||| ||||| ||||
Sbjct: 274 tcagggtcagggtgtgctcatagaagaggtcgtcagccttccgcttgaatttggggtgct 215
Query: 848 ccttctgctggagaacaaagatgatatctccagtgacagtgtcaggcgcttcatcagctt 907
||||||||||||| || ||||| || ||||||||||| || |||||||||||||| || |
Sbjct: 214 ccttctgctggaggacgaagattatgtctccagtgacggtatcaggcgcttcatctgcct 155
Query: 908 caccagggaatgtgatcttctgcccattctgcatgcctttctccacaaacacttcaagaa 967
| |||||||| ||||||||||| |||| |||||| || ||||| || | ||| || || |
Sbjct: 154 cgccagggaaggtgatcttctgtccatgctgcatacccttctcgaccaccacctccagga 95
Query: 968 ccttcttctcctgcacaactttatcacccttgcactg 1004
| |||||||| || || || || ||||||||||||||
Sbjct: 94 ctttcttctcgtgaaccaccttctcacccttgcactg 58
>gb|CA002177.1|CA002177 HS06L24r HS Hordeum vulgare subsp. vulgare cDNA clone HS06L24
5-PRIME, mRNA sequence
Length = 595
Score = 462 bits (233), Expect = e-128
Identities = 428/489 (87%), Gaps = 13/489 (2%)
Strand = Plus / Minus
Query: 1153 ccagactttgaacccttaccattgcacttggagcagaggacactgcgggacagagagagc 1212
||||||||||||||||| ||||||||||| |||||||| ||| |||||| ||||||||
Sbjct: 594 ccagactttgaacccttgccattgcactttgagcagagcacattgcgggcaagagagagt 535
Query: 1213 ttctttgatgtgccattgtacaaatcctccagagaaaccttcagaggatgaaccacatca 1272
||||| ||||| ||||||||||| ||||| || ||||||||||||||||||||||||
Sbjct: 534 ttcttcgatgttccattgtacaactcctcaaggctaaccttcagaggatgaaccacatcc 475
Query: 1273 -tctccccgccgttgccttctgcccctactgctgccacctcca--aaagggctt----cc 1325
|| |||| || || | |||||||| ||||||||||| || |||||| || ||
Sbjct: 474 ctcacccctgcgctgacgcctgcccctgctgctgccaccacctccaaaggggttgccgcc 415
Query: 1326 accaccaaagaatgactggaatatgtcaaagggatcatgcatcccaccaccgcctcccat 1385
||||||||||||||| ||||| |||||||| ||||| ||||| |||||||| ||||||
Sbjct: 414 accaccaaagaatgattggaagatgtcaaatggatcgtgcattccaccacc---tcccat 358
Query: 1386 tccctccttgagggcatcctcaccatattggtcatagatctctctcttttcagggtcgct 1445
||||||||||||||||||||||||||| || ||||||||||||| ||| ||||| || ||
Sbjct: 357 tccctccttgagggcatcctcaccatactgatcatagatctctcgcttctcaggatcact 298
Query: 1446 gaggacctcataaccctgagctagctccttgaacttctcggggtcgccgcccttgtcggg 1505
| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 caagacctcataagcctgagctagctccttgaacttctcggggtcgccgcccttgtcggg 238
Query: 1506 gtggttcttgatggcggccttgcggtaggccttcttgaggtcatcctgtgacgcgtcctt 1565
|||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 237 gtggttcttgatggcggccttgcggtaggccttcttgaggtcgtcctgggacgcgtcctt 178
Query: 1566 ggaaacccccaggatctcgtagtaccgggtgttgtcgctcttcttcggcg---cgcggcc 1622
|| || ||||||||||||||||| || ||| |||||||||||||||||| |||||||
Sbjct: 177 gggcacgcccaggatctcgtagtagcgcgtgctgtcgctcttcttcggcggcccgcggcc 118
Query: 1623 gaacatctc 1631
|||||||||
Sbjct: 117 gaacatctc 109
>gb|BJ549828.1|BJ549828 BJ549828 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags33e03 3', mRNA sequence
Length = 661
Score = 462 bits (233), Expect = e-128
Identities = 489/573 (85%), Gaps = 6/573 (1%)
Strand = Plus / Plus
Query: 375 ctactgctgggcgcactgcaccctctgcgcgccgcc---cggcatgtcctcatcctcgtc 431
|||||||||||||||||||||||||||| ||||||| |||||| ||||| ||||||||
Sbjct: 86 ctactgctgggcgcactgcaccctctgcccgccgccgcccggcatatcctcgtcctcgtc 145
Query: 432 gtaggcctcctgg---tgctgctgctgccgcctccgcatctccgcttcgatgttcacgtc 488
||||||||||| ||||||||||| ||||||||||||| | || |||| | ||
Sbjct: 146 ataggcctcctgcgcctgctgctgctgttgcctccgcatctcttcctcaatgtctatatc 205
Query: 489 atagggcatcgtctcctcgcactcgtccagctccatgtcggtgtactgcgacaccggctt 548
|||| ||||||||||||||||||||| ||||||||||| ||||||||||| |||||||
Sbjct: 206 gtaggccatcgtctcctcgcactcgtctagctccatgtctgtgtactgcgatgccggctt 265
Query: 549 gggcgggagcacagcctccagggccttgcactgctccgggctcagcgagtccgggaactc 608
||||||||| || | ||| |||||||||||||| ||| |||||||||||| ||||| |
Sbjct: 266 gggcgggaggaccgtctcgagggccttgcactggtccaagctcagcgagtcggggaaaac 325
Query: 609 caccgagaagtggatgtacagcttgcccttcatgaacggcctctggtacatgggcatgcc 668
||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 326 caccgtgaagtggatgtagagcttgcccttcatgaagggcctctggtacatgggcatgcc 385
Query: 669 ttcgtcgttgatcgccttgaaagaatcaggcttcacaacttcgcccggatttgatttgat 728
|||||||||||||||||||| ||||||||||| |||||||| || || || || |||||
Sbjct: 386 ctcgtcgttgatcgccttgaatgaatcaggcttgacaacttccccggggttggacttgat 445
Query: 729 cagcagctgcctgttatccaagtgagtcacaacaaactggaagccacacagagattcagt 788
|||||||| ||| |||||| |||| | ||| | ||||||||||| || | || ||
Sbjct: 446 gagcagctgtctgccatccaaatgagctaggacatattggaagccacagagggcctccgt 505
Query: 789 caaggtcagggtgtgctcgtagaagaggtcatcaccctttctcttgaacttgggatgctc 848
|| ||||||||||||||| ||||||||||| ||| |||| | |||||| ||||| |||||
Sbjct: 506 cagggtcagggtgtgctcatagaagaggtcgtcagccttccgcttgaatttggggtgctc 565
Query: 849 cttctgctggagaacaaagatgatatctccagtgacagtgtcaggcgcttcatcagcttc 908
|||||||||||| || ||||| || ||||||||||| || |||||||||||||| || ||
Sbjct: 566 cttctgctggaggacgaagattatgtctccagtgacggtatcaggcgcttcatctgcctc 625
Query: 909 accagggaatgtgatcttctgcccattctgcat 941
|||||||| ||||||||||| |||| ||||||
Sbjct: 626 gccagggaaggtgatcttctgtccatgctgcat 658
>gb|BJ549026.1|BJ549026 BJ549026 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal38p02 3', mRNA sequence
Length = 665
Score = 458 bits (231), Expect = e-127
Identities = 495/582 (85%), Gaps = 6/582 (1%)
Strand = Plus / Plus
Query: 375 ctactgctgggcgcactgcaccctctgcgcgccgcc---cggcatgtcctcatcctcgtc 431
|||||||||||||||||||||||||||| ||||||| |||||| ||||| ||||||||
Sbjct: 82 ctactgctgggcgcactgcaccctctgcccgccgccgcccggcatatcctcgtcctcgtc 141
Query: 432 gtaggcctcctgg---tgctgctgctgccgcctccgcatctccgcttcgatgttcacgtc 488
||||||||||| ||||||||||| ||||||||||||| | || |||| | ||
Sbjct: 142 ataggcctcctgcgcctgctgctgctgttgcctccgcatctcttcctcaatgtctatatc 201
Query: 489 atagggcatcgtctcctcgcactcgtccagctccatgtcggtgtactgcgacaccggctt 548
|||| ||||||||||||||||||||| ||||||||||| ||||||||||| |||||||
Sbjct: 202 gtaggccatcgtctcctcgcactcgtctagctccatgtctgtgtactgcgatgccggctt 261
Query: 549 gggcgggagcacagcctccagggccttgcactgctccgggctcagcgagtccgggaactc 608
||||||||| || | ||| |||||||||||||| ||| |||||||||||| ||||| |
Sbjct: 262 gggcgggaggaccgtctcgagggccttgcactggtccaagctcagcgagtcggggaaaac 321
Query: 609 caccgagaagtggatgtacagcttgcccttcatgaacggcctctggtacatgggcatgcc 668
||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 322 caccgtgaagtggatgtagagcttgcccttcatgaagggcctctggtacatgggcatgcc 381
Query: 669 ttcgtcgttgatcgccttgaaagaatcaggcttcacaacttcgcccggatttgatttgat 728
|||||||||||||||||||| ||||||||||| |||||||| || || || || |||||
Sbjct: 382 ctcgtcgttgatcgccttgaatgaatcaggcttgacaacttccccggggttggacttgat 441
Query: 729 cagcagctgcctgttatccaagtgagtcacaacaaactggaagccacacagagattcagt 788
|||||||| ||| |||||| |||| | ||| | ||||||||||| || | || ||
Sbjct: 442 gagcagctgtctgccatccaaatgagctaggacatattggaagccacagagggcctccgt 501
Query: 789 caaggtcagggtgtgctcgtagaagaggtcatcaccctttctcttgaacttgggatgctc 848
|| ||||||||||||||| ||||||||||| ||| |||| | |||||| ||||| |||||
Sbjct: 502 cagggtcagggtgtgctcatagaagaggtcgtcagccttccgcttgaatttggggtgctc 561
Query: 849 cttctgctggagaacaaagatgatatctccagtgacagtgtcaggcgcttcatcagcttc 908
|||||||||||| || ||||| || ||| ||||||| || |||||||||||||| || ||
Sbjct: 562 cttctgctggaggacgaagattatgtctncagtgacggtatcaggcgcttcatctgcctc 621
Query: 909 accagggaatgtgatcttctgcccattctgcatgcctttctc 950
|||||||| ||||||||||| |||| |||||| || |||||
Sbjct: 622 gccagggaaggtgatcttctgtccatgctgcatacccttctc 663
>gb|BJ547294.1|BJ547294 BJ547294 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal29p02 5', mRNA sequence
Length = 485
Score = 444 bits (224), Expect = e-123
Identities = 406/464 (87%), Gaps = 12/464 (2%)
Strand = Plus / Minus
Query: 1177 cacttggagcagaggacactgcgggacagagagagcttctttgatgtgccattgtacaaa 1236
||||| |||||||| ||| |||||| |||||||| ||||| ||||| |||||||||||
Sbjct: 485 cactttgagcagagcacattgcgggcaagagagagtttcttcgatgttccattgtacaac 426
Query: 1237 tcctccagagaaaccttcagaggatgaaccacatcatctccccgccgttgccttctgccc 1296
||||| || |||||||||||||||||||||||| || |||| || || | ||||||
Sbjct: 425 tcctcaaggctaaccttcagaggatgaaccacatcctcacccctgcgctgacgcctgccc 366
Query: 1297 ctactgctg---ccacctccaaaagg---gcttccaccaccaaagaatgactggaatatg 1350
|| |||||| ||||||||||| || || ||||||||||||||||| ||||| |||
Sbjct: 365 ctgctgctgccaccacctccaaaggggttgccaccaccaccaaagaatgattggaagatg 306
Query: 1351 tcaaagggatcatgcatcccaccaccgcctcccattccctccttgagggcatcctcacca 1410
||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 305 tcaaatggatcatgcat---tccaccgcctcccattccctccttgagggcatcctcacca 249
Query: 1411 tattggtcatagatctctctcttttcagggtcgctgaggacctcataaccctgagctagc 1470
|| || ||||||||||||| ||| ||||| || || |||||||||||| ||||||||||
Sbjct: 248 tactgatcatagatctctcgcttctcaggatcactcaggacctcataagcctgagctagt 189
Query: 1471 tccttgaacttctcggggtcgccgcccttgtcggggtggttcttgatggcggccttgcgg 1530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 tccttgaacttctcggggtcgccgcccttgtcggggtggttcttgatggcggccttgcgg 129
Query: 1531 taggccttcttgaggtcatcctgtgacgcgtccttggaaacccccaggatctcgtagtac 1590
||||||||||||||||| ||||| ||||||||||||| || |||||||||||||||||
Sbjct: 128 taggccttcttgaggtcgtcctgggacgcgtccttgggcacgcccaggatctcgtagtag 69
Query: 1591 cgggtgttgtcgctcttcttcggcg---cgcggccgaacatctc 1631
|| ||| |||||||||||||||||| ||||||||||||||||
Sbjct: 68 cgcgtgctgtcgctcttcttcggcggcccgcggccgaacatctc 25
>gb|AV918791.1|AV918791 AV918791 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags22e10 3', mRNA sequence
Length = 668
Score = 436 bits (220), Expect = e-120
Identities = 496/584 (84%), Gaps = 8/584 (1%)
Strand = Plus / Plus
Query: 375 ctactgctgggcgcactgcaccctctgcgcgccgcc---cggcatgtcctcatcctcgtc 431
|||||||||||||||||||||||||||| ||||||| |||||| ||||| ||||||||
Sbjct: 80 ctactgctgggcgcactgcaccctctgcccgccgccgcccggcatatcctcgtcctcgtc 139
Query: 432 gtaggcctcctgg---tgctgctgctgccgcctccgcatctccgcttcgatgttcacgtc 488
||||||||||| ||||||||||| ||||||||||||| | || |||| | ||
Sbjct: 140 ataggcctcctgcgcctgctgctgctgttgcctccgcatctcttcctcaatgtctatatc 199
Query: 489 atagggcatcgtctcctcgcactcgtccagctccatgtcggtgtactgcgacaccggctt 548
|||| ||||||||||||||||||||| ||||||||||| ||||||||||| |||||||
Sbjct: 200 gtaggccatcgtctcctcgcactcgtctagctccatgtctgtgtactgcgatgccggctt 259
Query: 549 gggcgggagcacagcctccagggccttgcactgctccgggctcagcgagtccgggaactc 608
||||||||| || | ||| |||||||||||||| ||| |||||||||||| ||||| |
Sbjct: 260 gggcgggaggaccgtctcgagggccttgcactggtccaagctcagcgagtcggggaaaac 319
Query: 609 caccgagaagtggatgtacagcttgcccttcatgaacggcctctggtacatgggcatgcc 668
||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 320 caccgtgaagtggatgtagagcttgcccttcatgaagggcctctggtacatgggcatgcc 379
Query: 669 ttcgtcgttgatcgccttgaaagaatcaggcttcacaacttcgcccggatttgatttgat 728
|||||||||||||||||||| ||||||||||| |||||||| || || || || |||||
Sbjct: 380 ctcgtcgttgatcgccttgaatgaatcaggcttgacaacttccccggggttggacttgat 439
Query: 729 cagcagctgcctgttatccaagtgagtcacaacaaactggaagccacacagag-attcag 787
|||||||| ||| |||||| |||| | ||| | ||||||||||| || | || |
Sbjct: 440 gagcagctgtctgccatccaaatgagctaggacatattggaagccacagagggccctccg 499
Query: 788 tcaaggtcagggtgtgctcgtagaagaggtcatcaccctttctcttgaacttgggatgct 847
||| ||||||||||||||| ||||||||||| ||| |||| | |||||| ||||| ||||
Sbjct: 500 tcagggtcagggtgtgctcatagaagaggtcgtcagccttccgcttgaatttggggtgct 559
Query: 848 ccttctgctggagaacaaagatgatatctccagtgacagtgtcaggcgcttcatcagctt 907
||||||||||||| || ||||| || ||||||||||| || |||||||||||||| || |
Sbjct: 560 ccttctgctggaggacgaagattatgtctccagtgacggtatcaggcgcttcatctgcct 619
Query: 908 cacca-gggaatgtgatcttctgcccattctgcatgcctttctc 950
| ||| ||||| ||||||||||| |||| |||||| || |||||
Sbjct: 620 cgccaggggaaggtgatcttctgtccatgctgcatacccttctc 663
>gb|CB859966.1|CB859966 HI12C19w HI Hordeum vulgare subsp. vulgare cDNA clone HI12C19
3-PRIME, mRNA sequence
Length = 661
Score = 434 bits (219), Expect = e-120
Identities = 456/534 (85%), Gaps = 6/534 (1%)
Strand = Plus / Plus
Query: 375 ctactgctgggcgcactgcaccctctgcgcgccgcc---cggcatgtcctcatcctcgtc 431
|||||||||||||||||||||||||||| ||||||| |||||| ||||| ||||||||
Sbjct: 127 ctactgctgggcgcactgcaccctctgcccgccgccgcccggcatatcctcgtcctcgtc 186
Query: 432 gtaggcctcctgg---tgctgctgctgccgcctccgcatctccgcttcgatgttcacgtc 488
||||||||||| |||||||||||| ||||||||||||| | || |||| | |||
Sbjct: 187 ataggcctcctgcgcctgctgctgctgctgcctccgcatctcttcctcaatgtctatgtc 246
Query: 489 atagggcatcgtctcctcgcactcgtccagctccatgtcggtgtactgcgacaccggctt 548
|||| ||||||||||||||||||||| ||||||||||| ||||||||||| |||||||
Sbjct: 247 gtaggccatcgtctcctcgcactcgtctagctccatgtccgtgtactgcgatgccggctt 306
Query: 549 gggcgggagcacagcctccagggccttgcactgctccgggctcagcgagtccgggaactc 608
||||||||| || | ||| |||||||||||||| ||| ||||||||||||| ||||| |
Sbjct: 307 gggcgggaggaccgtctcgagggccttgcactggtccaggctcagcgagtcggggaaaac 366
Query: 609 caccgagaagtggatgtacagcttgcccttcatgaacggcctctggtacatgggcatgcc 668
|||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 367 aaccgtgaagtggatgtagagcttgcccttcatgaagggcctctggtacatgggcatgcc 426
Query: 669 ttcgtcgttgatcgccttgaaagaatcaggcttcacaacttcgcccggatttgatttgat 728
|||||||||||||||||||| ||||||||||| |||||||| || || || || |||||
Sbjct: 427 ctcgtcgttgatcgccttgaatgaatcaggcttgacaacttccccggggttggacttgat 486
Query: 729 cagcagctgcctgttatccaagtgagtcacaacaaactggaagccacacagagattcagt 788
|||||||| ||| |||||| |||| | ||| | ||||||||||| || | || ||
Sbjct: 487 gagcagctgtctgccatccaaatgagctaggacatattggaagccacagagggcctccgt 546
Query: 789 caaggtcagggtgtgctcgtagaagaggtcatcaccctttctcttgaacttgggatgctc 848
|| ||||||||||||||| ||||||||||| || |||| | |||||| |||| |||||
Sbjct: 547 cagggtcagggtgtgctcatagaagaggtcgtcggccttccgcttgaatntggggtgctc 606
Query: 849 cttctgctggagaacaaagatgatatctccagtgacagtgtcaggcgcttcatc 902
|||||||||||| || ||||| || ||||||||||| || ||||||||||||||
Sbjct: 607 cttctgctggaggacgaagattatgtctccagtgacggtatcaggcgcttcatc 660
>gb|AV918185.1|AV918185 AV918185 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20c14 3', mRNA sequence
Length = 617
Score = 432 bits (218), Expect = e-119
Identities = 456/534 (85%), Gaps = 6/534 (1%)
Strand = Plus / Plus
Query: 375 ctactgctgggcgcactgcaccctctgcgcgccgcc---cggcatgtcctcatcctcgtc 431
|||||||||||||||||||||||||||| ||||||| |||||| ||||| ||||||||
Sbjct: 78 ctactgctgggcgcactgcaccctctgcccgccgccgcccggcatatcctcgtcctcgtc 137
Query: 432 gtaggcctcctgg---tgctgctgctgccgcctccgcatctccgcttcgatgttcacgtc 488
||||||||||| ||||||||||| ||||||||||||| | || |||| | ||
Sbjct: 138 ataggcctcctgcgcctgctgctgctgttgcctccgcatctcttcctcaatgtctatatc 197
Query: 489 atagggcatcgtctcctcgcactcgtccagctccatgtcggtgtactgcgacaccggctt 548
|||| ||||||||||||||||||||| ||||||||||| ||||||||||| |||||||
Sbjct: 198 gtaggccatcgtctcctcgcactcgtctagctccatgtctgtgtactgcgatgccggctt 257
Query: 549 gggcgggagcacagcctccagggccttgcactgctccgggctcagcgagtccgggaactc 608
||||||||| || | ||| |||||||||||||| ||| |||||||||||| ||||| |
Sbjct: 258 gggcgggaggaccgtctcgagggccttgcactggtccaagctcagcgagtcggggaaaac 317
Query: 609 caccgagaagtggatgtacagcttgcccttcatgaacggcctctggtacatgggcatgcc 668
||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 318 caccgtgaagtggatgtagagcttgcccttcatgaagggcctctggtacatgggcatgcc 377
Query: 669 ttcgtcgttgatcgccttgaaagaatcaggcttcacaacttcgcccggatttgatttgat 728
|||||||||||||||||||| ||||||||||| |||||||| || || || || |||||
Sbjct: 378 ctcgtcgttgatcgccttgaatgaatcaggcttgacaacttccccggggttggacttgat 437
Query: 729 cagcagctgcctgttatccaagtgagtcacaacaaactggaagccacacagagattcagt 788
|||||||| ||| |||||| |||| | ||| | ||||||||||| || | || ||
Sbjct: 438 gagcagctgtctgccatccaaatgagctaggacatattggaagccacagagggcctccgt 497
Query: 789 caaggtcagggtgtgctcgtagaagaggtcatcaccctttctcttgaacttgggatgctc 848
|| ||||||||||||||| ||||||||||| ||| |||| | |||||| ||||| |||||
Sbjct: 498 cagggtcagggtgtgctcatagaagaggtcgtcagccttccgcttgaatttggggtgctc 557
Query: 849 cttctgctggagaacaaagatgatatctccagtgacagtgtcaggcgcttcatc 902
|||||||||||| || ||||| || ||||||||||| || ||||||||||||||
Sbjct: 558 cttctgctggaggacgaagattatgtctccagtgacggtatcaggcgcttcatc 611
>gb|AV935618.1|AV935618 AV935618 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal4o07 3', mRNA sequence
Length = 636
Score = 432 bits (218), Expect = e-119
Identities = 456/534 (85%), Gaps = 6/534 (1%)
Strand = Plus / Plus
Query: 375 ctactgctgggcgcactgcaccctctgcgcgccgcc---cggcatgtcctcatcctcgtc 431
|||||||||||||||||||||||||||| ||||||| |||||| ||||| ||||||||
Sbjct: 98 ctactgctgggcgcactgcaccctctgcccgccgccgcccggcatatcctcgtcctcgtc 157
Query: 432 gtaggcctcctgg---tgctgctgctgccgcctccgcatctccgcttcgatgttcacgtc 488
||||||||||| ||||||||||| ||||||||||||| | || |||| | ||
Sbjct: 158 ataggcctcctgcgcctgctgctgctgttgcctccgcatctcttcctcaatgtctatatc 217
Query: 489 atagggcatcgtctcctcgcactcgtccagctccatgtcggtgtactgcgacaccggctt 548
|||| ||||||||||||||||||||| ||||||||||| ||||||||||| |||||||
Sbjct: 218 gtaggccatcgtctcctcgcactcgtctagctccatgtctgtgtactgcgatgccggctt 277
Query: 549 gggcgggagcacagcctccagggccttgcactgctccgggctcagcgagtccgggaactc 608
||||||||| || | ||| |||||||||||||| ||| |||||||||||| ||||| |
Sbjct: 278 gggcgggaggaccgtctcgagggccttgcactggtccaagctcagcgagtcggggaaaac 337
Query: 609 caccgagaagtggatgtacagcttgcccttcatgaacggcctctggtacatgggcatgcc 668
||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 338 caccgtgaagtggatgtagagcttgcccttcatgaagggcctctggtacatgggcatgcc 397
Query: 669 ttcgtcgttgatcgccttgaaagaatcaggcttcacaacttcgcccggatttgatttgat 728
|||||||||||||||||||| ||||||||||| |||||||| || || || || |||||
Sbjct: 398 ctcgtcgttgatcgccttgaatgaatcaggcttgacaacttccccggggttggacttgat 457
Query: 729 cagcagctgcctgttatccaagtgagtcacaacaaactggaagccacacagagattcagt 788
|||||||| ||| |||||| |||| | ||| | ||||||||||| || | || ||
Sbjct: 458 gagcagctgtctgccatccaaatgagctaggacatattggaagccacagagggcctccgt 517
Query: 789 caaggtcagggtgtgctcgtagaagaggtcatcaccctttctcttgaacttgggatgctc 848
|| ||||||||||||||| ||||||||||| ||| |||| | |||||| ||||| |||||
Sbjct: 518 cagggtcagggtgtgctcatagaagaggtcgtcagccttccgcttgaatttggggtgctc 577
Query: 849 cttctgctggagaacaaagatgatatctccagtgacagtgtcaggcgcttcatc 902
|||||||||||| || ||||| || ||||||||||| || ||||||||||||||
Sbjct: 578 cttctgctggaggacgaagattatgtctccagtgacggtatcaggcgcttcatc 631
>gb|BJ451484.1|BJ451484 BJ451484 K. Sato unpublished cDNA library, cv. Akashinriki vegetative
stage leaves Hordeum vulgare subsp. vulgare cDNA clone
baak34c22 5', mRNA sequence
Length = 585
Score = 428 bits (216), Expect = e-118
Identities = 474/560 (84%)
Strand = Plus / Minus
Query: 445 tgctgctgctgccgcctccgcatctccgcttcgatgttcacgtcatagggcatcgtctcc 504
|||||||||||| ||||||||||||| | || |||| | ||| |||| ||||||||||
Sbjct: 579 tgctgctgctgctgcctccgcatctcttcctcaatgtctatgtcgtaggccatcgtctcc 520
Query: 505 tcgcactcgtccagctccatgtcggtgtactgcgacaccggcttgggcgggagcacagcc 564
||||||||||| ||||||||||| ||||||||||| |||||||||||||||| || | |
Sbjct: 519 tcgcactcgtctagctccatgtccgtgtactgcgatgccggcttgggcgggaggaccgtc 460
Query: 565 tccagggccttgcactgctccgggctcagcgagtccgggaactccaccgagaagtggatg 624
|| |||||||||||||| ||| ||||||||||||| ||||| | |||| ||||||||||
Sbjct: 459 tcgagggccttgcactggtccaggctcagcgagtcggggaaaacaaccgtgaagtggatg 400
Query: 625 tacagcttgcccttcatgaacggcctctggtacatgggcatgccttcgtcgttgatcgcc 684
|| ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 399 tagagcttgcccttcatgaagggcctctggtacatgggcatgccctcgtcgttgatcgcc 340
Query: 685 ttgaaagaatcaggcttcacaacttcgcccggatttgatttgatcagcagctgcctgtta 744
||||| ||||||||||| |||||||| || || || || ||||| |||||||| ||| |
Sbjct: 339 ttgaatgaatcaggcttgacaacttccccggggttggacttgatgagcagctgtctgcca 280
Query: 745 tccaagtgagtcacaacaaactggaagccacacagagattcagtcaaggtcagggtgtgc 804
||||| |||| | ||| | ||||||||||| || | || |||| |||||||||||||
Sbjct: 279 tccaaatgagctaggacatattggaagccacagagggcctccgtcagggtcagggtgtgc 220
Query: 805 tcgtagaagaggtcatcaccctttctcttgaacttgggatgctccttctgctggagaaca 864
|| ||||||||||| || |||| | |||||| ||||| ||||||||||||||||| ||
Sbjct: 219 tcatagaagaggtcgtcggccttccgcttgaatttggggtgctccttctgctggaggacg 160
Query: 865 aagatgatatctccagtgacagtgtcaggcgcttcatcagcttcaccagggaatgtgatc 924
||||| || ||||||||||| || |||||||||||||| || || |||||||| ||||||
Sbjct: 159 aagattatgtctccagtgacggtatcaggcgcttcatctgcctctccagggaaggtgatc 100
Query: 925 ttctgcccattctgcatgcctttctccacaaacacttcaagaaccttcttctcctgcaca 984
||||| |||| |||||| || ||||| || | ||| || || || |||||||| || ||
Sbjct: 99 ttctgtccatgctgcatacccttctcgaccaccacctccaggactttcttctcgtgaacc 40
Query: 985 actttatcacccttgcactg 1004
|| || ||||||||||||||
Sbjct: 39 accttctcacccttgcactg 20
>gb|AV915331.1|AV915331 AV915331 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags13o20 5', mRNA sequence
Length = 678
Score = 420 bits (212), Expect = e-116
Identities = 528/632 (83%), Gaps = 1/632 (0%)
Strand = Plus / Minus
Query: 445 tgctgctgctgccgcctccgcatctccgcttcgatgttcacgtcatagggcatcgtctcc 504
||||||||||| ||||||||||||| | || |||| | || |||| ||||||||||
Sbjct: 657 tgctgctgctgttgcctccgcatctcttcctcaatgtctatatcgtaggccatcgtctcc 598
Query: 505 tcgcactcgtccagctccatgtcggtgtactgcgaca-ccggcttgggcgggagcacagc 563
||||||||||| ||||||||||| ||||||||||| |||||||||||||||| || |
Sbjct: 597 tcgcactcgtctagctccatgtctgtgtactgcgaatgccggcttgggcgggaggaccgt 538
Query: 564 ctccagggccttgcactgctccgggctcagcgagtccgggaactccaccgagaagtggat 623
||| |||||||||||||| ||| |||||||||||| ||||| |||||| |||||||||
Sbjct: 537 ctcgagggccttgcactggtccaagctcagcgagtcggggaaaaccaccgtgaagtggat 478
Query: 624 gtacagcttgcccttcatgaacggcctctggtacatgggcatgccttcgtcgttgatcgc 683
||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct: 477 gtagagcttgcccttcatgaagggcctctggtacatgggcatgccctcgtcgttgatcgc 418
Query: 684 cttgaaagaatcaggcttcacaacttcgcccggatttgatttgatcagcagctgcctgtt 743
|||||| ||||||||||| |||||||| || || || || ||||| |||||||| |||
Sbjct: 417 cttgaatgaatcaggcttgacaacttccccggggttggacttgatgagcagctgtctgcc 358
Query: 744 atccaagtgagtcacaacaaactggaagccacacagagattcagtcaaggtcagggtgtg 803
|||||| |||| | ||| | ||||||||||| || | || |||| ||||||||||||
Sbjct: 357 atccaaatgagctaggacatattggaagccacagagggcctccgtcagggtcagggtgtg 298
Query: 804 ctcgtagaagaggtcatcaccctttctcttgaacttgggatgctccttctgctggagaac 863
||| ||||||||||| ||| |||| | |||||| ||||| ||||||||||||||||| ||
Sbjct: 297 ctcatagaagaggtcgtcagccttccgcttgaatttggggtgctccttctgctggaggac 238
Query: 864 aaagatgatatctccagtgacagtgtcaggcgcttcatcagcttcaccagggaatgtgat 923
||||| || ||||||||||| || |||||||||||||| || || |||||||| |||||
Sbjct: 237 gaagattatgtctccagtgacggtatcaggcgcttcatctgcctcgccagggaaggtgat 178
Query: 924 cttctgcccattctgcatgcctttctccacaaacacttcaagaaccttcttctcctgcac 983
|||||| |||| |||||| || ||||| || | ||| || || || |||||||| || ||
Sbjct: 177 cttctgtccatgctgcatacccttctcgaccaccacctccaggactttcttctcgtgaac 118
Query: 984 aactttatcacccttgcactgtgggcatctatccttgtcgctgattgtctctccagaacc 1043
|| || |||||||||||||| ||| | |||||| || ||||| ||||| ||| ||
Sbjct: 117 caccttctcacccttgcactgcccgcaacgatccttatcactgatggtctcaccacttcc 58
Query: 1044 cttgcactcgttgcaaggatgctgcatttgct 1075
| ||||||| ||||| || |||||||||||||
Sbjct: 57 cctgcactcattgcagggctgctgcatttgct 26
>gb|AV933573.1|AV933573 AV933573 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal7i04 5', mRNA sequence
Length = 629
Score = 420 bits (212), Expect = e-116
Identities = 473/560 (84%)
Strand = Plus / Minus
Query: 445 tgctgctgctgccgcctccgcatctccgcttcgatgttcacgtcatagggcatcgtctcc 504
||||||||||| ||||||||||||| | || |||| | || |||| ||||||||||
Sbjct: 607 tgctgctgctgttgcctccgcatctcttcctcaatgtctatatcgtaggccatcgtctcc 548
Query: 505 tcgcactcgtccagctccatgtcggtgtactgcgacaccggcttgggcgggagcacagcc 564
||||||||||| ||||||||||| ||||||||||| |||||||||||||||| || | |
Sbjct: 547 tcgcactcgtctagctccatgtctgtgtactgcgatgccggcttgggcgggaggaccgtc 488
Query: 565 tccagggccttgcactgctccgggctcagcgagtccgggaactccaccgagaagtggatg 624
|| |||||||||||||| ||| |||||||||||| ||||| |||||| ||||||||||
Sbjct: 487 tcgagggccttgcactggtccaagctcagcgagtcggggaaaaccaccgtgaagtggatg 428
Query: 625 tacagcttgcccttcatgaacggcctctggtacatgggcatgccttcgtcgttgatcgcc 684
|| ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 427 tagagcttgcccttcatgaagggcctctggtacatgggcatgccctcgtcgttgatcgcc 368
Query: 685 ttgaaagaatcaggcttcacaacttcgcccggatttgatttgatcagcagctgcctgtta 744
||||| ||||||||||| |||||||| || || || || ||||| |||||||| ||| |
Sbjct: 367 ttgaatgaatcaggcttgacaacttccccggggttggacttgatgagcagctgtctgcca 308
Query: 745 tccaagtgagtcacaacaaactggaagccacacagagattcagtcaaggtcagggtgtgc 804
||||| |||| | ||| | ||||||||||| || | || |||| |||||||||||||
Sbjct: 307 tccaaatgagctaggacatattggaagccacagagggcctccgtcagggtcagggtgtgc 248
Query: 805 tcgtagaagaggtcatcaccctttctcttgaacttgggatgctccttctgctggagaaca 864
|| ||||||||||| ||| |||| | |||||| ||||| ||||||||||||||||| ||
Sbjct: 247 tcatagaagaggtcgtcagccttccgcttgaatttggggtgctccttctgctggaggacg 188
Query: 865 aagatgatatctccagtgacagtgtcaggcgcttcatcagcttcaccagggaatgtgatc 924
||||| || ||||||||||| || |||||||||||||| || || |||||||| ||||||
Sbjct: 187 aagattatgtctccagtgacggtatcaggcgcttcatctgcctcgccagggaaggtgatc 128
Query: 925 ttctgcccattctgcatgcctttctccacaaacacttcaagaaccttcttctcctgcaca 984
||||| |||| |||||| || ||||| || | ||| || || || |||||||| || ||
Sbjct: 127 ttctgtccatgctgcatacccttctcgaccaccacctccaggactttcttctcgtgaacc 68
Query: 985 actttatcacccttgcactg 1004
|| || ||||||||||||||
Sbjct: 67 accttctcacccttgcactg 48
>gb|BJ471254.1|BJ471254 BJ471254 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal17h10 5', mRNA sequence
Length = 629
Score = 420 bits (212), Expect = e-116
Identities = 473/560 (84%)
Strand = Plus / Minus
Query: 445 tgctgctgctgccgcctccgcatctccgcttcgatgttcacgtcatagggcatcgtctcc 504
||||||||||| ||||||||||||| | || |||| | || |||| ||||||||||
Sbjct: 607 tgctgctgctgttgcctccgcatctcttcctcaatgtctatatcgtaggccatcgtctcc 548
Query: 505 tcgcactcgtccagctccatgtcggtgtactgcgacaccggcttgggcgggagcacagcc 564
||||||||||| ||||||||||| ||||||||||| |||||||||||||||| || | |
Sbjct: 547 tcgcactcgtctagctccatgtctgtgtactgcgatgccggcttgggcgggaggaccgtc 488
Query: 565 tccagggccttgcactgctccgggctcagcgagtccgggaactccaccgagaagtggatg 624
|| |||||||||||||| ||| |||||||||||| ||||| |||||| ||||||||||
Sbjct: 487 tcgagggccttgcactggtccaagctcagcgagtcggggaaaaccaccgtgaagtggatg 428
Query: 625 tacagcttgcccttcatgaacggcctctggtacatgggcatgccttcgtcgttgatcgcc 684
|| ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 427 tagagcttgcccttcatgaagggcctctggtacatgggcatgccctcgtcgttgatcgcc 368
Query: 685 ttgaaagaatcaggcttcacaacttcgcccggatttgatttgatcagcagctgcctgtta 744
||||| ||||||||||| |||||||| || || || || ||||| |||||||| ||| |
Sbjct: 367 ttgaatgaatcaggcttgacaacttccccggggttggacttgatgagcagctgtctgcca 308
Query: 745 tccaagtgagtcacaacaaactggaagccacacagagattcagtcaaggtcagggtgtgc 804
||||| |||| | ||| | ||||||||||| || | || |||| |||||||||||||
Sbjct: 307 tccaaatgagctaggacatattggaagccacagagggcctccgtcagggtcagggtgtgc 248
Query: 805 tcgtagaagaggtcatcaccctttctcttgaacttgggatgctccttctgctggagaaca 864
|| ||||||||||| ||| |||| | |||||| ||||| ||||||||||||||||| ||
Sbjct: 247 tcatagaagaggtcgtcagccttccgcttgaatttggggtgctccttctgctggaggacg 188
Query: 865 aagatgatatctccagtgacagtgtcaggcgcttcatcagcttcaccagggaatgtgatc 924
||||| || ||||||||||| || |||||||||||||| || || |||||||| ||||||
Sbjct: 187 aagattatgtctccagtgacggtatcaggcgcttcatctgcctcgccagggaaggtgatc 128
Query: 925 ttctgcccattctgcatgcctttctccacaaacacttcaagaaccttcttctcctgcaca 984
||||| |||| |||||| || ||||| || | ||| || || || |||||||| || ||
Sbjct: 127 ttctgtccatgctgcatacccttctcgaccaccacctccaggactttcttctcgtgaacc 68
Query: 985 actttatcacccttgcactg 1004
|| || ||||||||||||||
Sbjct: 67 accttctcacccttgcactg 48
>gb|CA003896.1|CA003896 HS15P12r HS Hordeum vulgare subsp. vulgare cDNA clone HS15P12
5-PRIME, mRNA sequence
Length = 501
Score = 420 bits (212), Expect = e-116
Identities = 422/490 (86%), Gaps = 9/490 (1%)
Strand = Plus / Minus
Query: 1046 tgcactcgttgcaaggatgctgcatttgctggatcattccaggccccaactgcctgattt 1105
||||||| ||||| || |||||||||||||| |||||||| || |||| ||||||||| |
Sbjct: 491 tgcactcattgcagggctgctgcatttgctgtatcattcctggtcccagctgcctgatct 432
Query: 1106 ggaccttaaagccagaaccttggcaaccagcacacctcgatgaagctccagactttgaac 1165
||||||| | |||| ||||||||| || |||||| || ||||| |||||||||||||
Sbjct: 431 ggaccttgtaaccagcaccttggcagccggcacacttcatggaagccccagactttgaac 372
Query: 1166 ccttaccattgcacttggagcagaggacactgcgggacagagagagcttctttgatgtgc 1225
|||| ||||||||||| |||||||| ||| |||||| |||||||| ||||| ||||| |
Sbjct: 371 ccttgccattgcactttgagcagagcacattgcgggcaagagagagtttcttcgatgttc 312
Query: 1226 cattgtacaaatcctccagagaaaccttcagaggatgaaccacatcatctccccgccgtt 1285
|||||||||| ||||| || |||||||||||||||||||||||| || |||| || |
Sbjct: 311 cattgtacaactcctcaaggctaaccttcagaggatgaaccacatcctcacccctgcgct 252
Query: 1286 gccttctgcccctactgctgccacctcca--aaagggctt----ccaccaccaaagaatg 1339
| | |||||||| ||||||||||| || |||||| || ||||||||||||||||
Sbjct: 251 gacgcctgcccctgctgctgccaccacctccaaaggggttgccgccaccaccaaagaatg 192
Query: 1340 actggaatatgtcaaagggatcatgcatcccaccaccgcctcccattccctccttgaggg 1399
| ||||| |||||||| ||||| ||||| |||||||| ||||||||||||||||||||
Sbjct: 191 attggaagatgtcaaatggatcgtgcattccaccacc---tcccattccctccttgaggg 135
Query: 1400 catcctcaccatattggtcatagatctctctcttttcagggtcgctgaggacctcataac 1459
||||||||||||| || ||||||||||||| ||| ||||| || || | ||||||||||
Sbjct: 134 catcctcaccatactgatcatagatctctcgcttctcaggatcactcaagacctcataag 75
Query: 1460 cctgagctagctccttgaacttctcggggtcgccgcccttgtcggggtggttcttgatgg 1519
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74 cctgagctagctccttgaacttctcggggtcgccgcccttgtcggggtggttcttgatgg 15
Query: 1520 cggccttgcg 1529
||||||||||
Sbjct: 14 cggccttgcg 5
>gb|BJ547299.1|BJ547299 BJ547299 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal30b23 5', mRNA sequence
Length = 628
Score = 420 bits (212), Expect = e-116
Identities = 473/560 (84%)
Strand = Plus / Minus
Query: 445 tgctgctgctgccgcctccgcatctccgcttcgatgttcacgtcatagggcatcgtctcc 504
||||||||||| ||||||||||||| | || |||| | || |||| ||||||||||
Sbjct: 606 tgctgctgctgttgcctccgcatctcttcctcaatgtctatatcgtaggccatcgtctcc 547
Query: 505 tcgcactcgtccagctccatgtcggtgtactgcgacaccggcttgggcgggagcacagcc 564
||||||||||| ||||||||||| ||||||||||| |||||||||||||||| || | |
Sbjct: 546 tcgcactcgtctagctccatgtctgtgtactgcgatgccggcttgggcgggaggaccgtc 487
Query: 565 tccagggccttgcactgctccgggctcagcgagtccgggaactccaccgagaagtggatg 624
|| |||||||||||||| ||| |||||||||||| ||||| |||||| ||||||||||
Sbjct: 486 tcgagggccttgcactggtccaagctcagcgagtcggggaaaaccaccgtgaagtggatg 427
Query: 625 tacagcttgcccttcatgaacggcctctggtacatgggcatgccttcgtcgttgatcgcc 684
|| ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 426 tagagcttgcccttcatgaagggcctctggtacatgggcatgccctcgtcgttgatcgcc 367
Query: 685 ttgaaagaatcaggcttcacaacttcgcccggatttgatttgatcagcagctgcctgtta 744
||||| ||||||||||| |||||||| || || || || ||||| |||||||| ||| |
Sbjct: 366 ttgaatgaatcaggcttgacaacttccccggggttggacttgatgagcagctgtctgcca 307
Query: 745 tccaagtgagtcacaacaaactggaagccacacagagattcagtcaaggtcagggtgtgc 804
||||| |||| | ||| | ||||||||||| || | || |||| |||||||||||||
Sbjct: 306 tccaaatgagctaggacatattggaagccacagagggcctccgtcagggtcagggtgtgc 247
Query: 805 tcgtagaagaggtcatcaccctttctcttgaacttgggatgctccttctgctggagaaca 864
|| ||||||||||| ||| |||| | |||||| ||||| ||||||||||||||||| ||
Sbjct: 246 tcatagaagaggtcgtcagccttccgcttgaatttggggtgctccttctgctggaggacg 187
Query: 865 aagatgatatctccagtgacagtgtcaggcgcttcatcagcttcaccagggaatgtgatc 924
||||| || ||||||||||| || |||||||||||||| || || |||||||| ||||||
Sbjct: 186 aagattatgtctccagtgacggtatcaggcgcttcatctgcctcgccagggaaggtgatc 127
Query: 925 ttctgcccattctgcatgcctttctccacaaacacttcaagaaccttcttctcctgcaca 984
||||| |||| |||||| || ||||| || | ||| || || || |||||||| || ||
Sbjct: 126 ttctgtccatgctgcatacccttctcgaccaccacctccaggactttcttctcgtgaacc 67
Query: 985 actttatcacccttgcactg 1004
|| || ||||||||||||||
Sbjct: 66 accttctcacccttgcactg 47
>gb|AV931194.1|AV931194 AV931194 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd18o07 3', mRNA sequence
Length = 651
Score = 418 bits (211), Expect = e-115
Identities = 456/535 (85%), Gaps = 7/535 (1%)
Strand = Plus / Plus
Query: 375 ctactgctgggcgcactgcaccctctgcgcgccgcc---cggcatgtcctcatcctcgtc 431
|||||||||||||||||||||||||||| ||||||| |||||| ||||| ||||||||
Sbjct: 113 ctactgctgggcgcactgcaccctctgcccgccgccgcccggcatatcctcgtcctcgtc 172
Query: 432 gtaggcctcctgg---tgctgctgctgccgcctccgcatctccgcttcgatgttcacgtc 488
||||||||||| ||||||||||| ||||||||||||| | || |||| | ||
Sbjct: 173 ataggcctcctgcgcctgctgctgctgttgcctccgcatctcttcctcaatgtctatatc 232
Query: 489 atagggcatcgtctcctcgcactcgtccagctccatgtcggtgtactgcgacaccggctt 548
|||| ||||||||||||||||||||| ||||||||||| ||||||||||| |||||||
Sbjct: 233 gtaggccatcgtctcctcgcactcgtctagctccatgtctgtgtactgcgatgccggctt 292
Query: 549 gggcgggagcacagcctccagggccttgcactgctccgggctcagcgagtccgggaactc 608
||||||||| || | ||| |||||||||||||| ||| |||||||||||| ||||| |
Sbjct: 293 gggcgggaggaccgtctcgagggccttgcactggtccaagctcagcgagtcggggaaaac 352
Query: 609 caccgagaagtggatgtacagcttgcccttcatgaacggcctctggtacatgggcatgcc 668
||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 353 caccgtgaagtggatgtagagcttgcccttcatgaagggcctctggtacatgggcatgcc 412
Query: 669 ttcgtcgttgatcgccttgaaagaatcaggcttcacaacttcgcccggatttgatttgat 728
|||||||||||||||||||| ||||||||||| |||||||| || || || || |||||
Sbjct: 413 ctcgtcgttgatcgccttgaatgaatcaggcttgacaacttccccggggttggacttgat 472
Query: 729 cagcagctgcctgttatccaagtgagtcacaacaaactggaagccacacagag-attcag 787
|||||||| ||| |||||| |||| | ||| | ||||||||||| || | || |
Sbjct: 473 gagcagctgtctgccatccaaatgagctaggacatattggaagccacagagggccctccg 532
Query: 788 tcaaggtcagggtgtgctcgtagaagaggtcatcaccctttctcttgaacttgggatgct 847
||| ||||||||||||||| ||||||||||| ||| |||| | |||||| ||||| ||||
Sbjct: 533 tcagggtcagggtgtgctcatagaagaggtcgtcagccttccgcttgaatttggggtgct 592
Query: 848 ccttctgctggagaacaaagatgatatctccagtgacagtgtcaggcgcttcatc 902
||||||||||||| || ||||| || ||||||||||| || ||||||||||||||
Sbjct: 593 ccttctgctggaggacgaagattatgtctccagtgacggtatcaggcgcttcatc 647
>gb|BJ458979.1|BJ458979 BJ458979 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak34c22 3', mRNA sequence
Length = 591
Score = 414 bits (209), Expect = e-114
Identities = 417/486 (85%), Gaps = 3/486 (0%)
Strand = Plus / Plus
Query: 375 ctactgctgggcgcactgcaccctctgcgcgccgcccggcatgtcctcatcctcgtcgta 434
|||||||||||||||||||||||||||| ||||||||||||| ||||| |||||||| ||
Sbjct: 106 ctactgctgggcgcactgcaccctctgcccgccgcccggcatatcctcgtcctcgtcata 165
Query: 435 ggcctcctgg---tgctgctgctgccgcctccgcatctccgcttcgatgttcacgtcata 491
||||||||| |||||||||||| ||||||||||||| | || |||| | ||| ||
Sbjct: 166 ggcctcctgcgcctgctgctgctgctgcctccgcatctcttcctcaatgtctatgtcgta 225
Query: 492 gggcatcgtctcctcgcactcgtccagctccatgtcggtgtactgcgacaccggcttggg 551
|| ||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||
Sbjct: 226 ggccatcgtctcctcgcactcgtctagctccatgtccgtgtactgcgatgccggcttggg 285
Query: 552 cgggagcacagcctccagggccttgcactgctccgggctcagcgagtccgggaactccac 611
|||||| || | ||| |||||||||||||| ||| ||||||||||||| ||||| | ||
Sbjct: 286 cgggaggaccgtctcgagggccttgcactggtccaggctcagcgagtcggggaaaacaac 345
Query: 612 cgagaagtggatgtacagcttgcccttcatgaacggcctctggtacatgggcatgccttc 671
|| |||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 346 cgtgaagtggatgtagagcttgcccttcatgaagggcctctggtacatgggcatgccctc 405
Query: 672 gtcgttgatcgccttgaaagaatcaggcttcacaacttcgcccggatttgatttgatcag 731
|||||||||||||||||| ||||||||||| |||||||| || || || || ||||| ||
Sbjct: 406 gtcgttgatcgccttgaatgaatcaggcttgacaacttccccggggttggacttgatgag 465
Query: 732 cagctgcctgttatccaagtgagtcacaacaaactggaagccacacagagattcagtcaa 791
|||||| ||| |||||| |||| | ||| | ||||||||||| || | || ||||
Sbjct: 466 cagctgtctgccatccaaatgagctaggacatattggaagccacagagggcctccgtcag 525
Query: 792 ggtcagggtgtgctcgtagaagaggtcatcaccctttctcttgaacttgggatgctcctt 851
||||||||||||||| ||||||||||| || |||| | |||||| ||||| |||| |||
Sbjct: 526 ggtcagggtgtgctcatagaagaggtcgtcggccttccgcttgaatttggggtgctnctt 585
Query: 852 ctgctg 857
||||||
Sbjct: 586 ctgctg 591
>gb|AV918750.1|AV918750 AV918750 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags22b21 3', mRNA sequence
Length = 640
Score = 410 bits (207), Expect = e-113
Identities = 455/535 (85%), Gaps = 7/535 (1%)
Strand = Plus / Plus
Query: 375 ctactgctgggcgcactgcaccctctgcgcgccgcc---cggcatgtcctcatcctcgtc 431
|||||||||||||||||||||||||||| ||||||| |||||| ||||| ||||||||
Sbjct: 97 ctactgctgggcgcactgcaccctctgcccgccgccgcccggcatatcctcgtcctcgtc 156
Query: 432 gtaggcctcctgg---tgctgctgctgccgcctccgcatctccgcttcgatgttcacgtc 488
||||||||||| ||||||||||| ||||||||||||| | || |||| | ||
Sbjct: 157 ataggcctcctgcgcctgctgctgctgttgcctccgcatctcttcctcaatgtctatatc 216
Query: 489 atagggcatcgtctcctcgcactcgtccagctccatgtcggtgtactgcgacaccggctt 548
|||| ||||||||||||||||||||| ||||||||||| ||||||||||| |||||||
Sbjct: 217 gtaggccatcgtctcctcgcactcgtctagctccatgtctgtgtactgcgatgccggctt 276
Query: 549 gggcgggagcacagcctccagggccttgcactgctccgggctcagcgagtccgggaactc 608
||||||||| || | ||| |||||||||||||| ||| |||||||||||| ||||| |
Sbjct: 277 gggcgggaggaccgtctcgagggccttgcactggtccaagctcagcgagtcggggaaaac 336
Query: 609 caccgagaagtggatgtacagcttgcccttcatgaacggcctctggtacatgggcatgcc 668
||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 337 caccgtgaagtggatgtagagcttgcccttcatgaagggcctctggtacatgggcatgcc 396
Query: 669 ttcgtcgttgatcgccttgaaagaatcaggcttcacaacttcgcccggatttgatttgat 728
|||||||||||||||||||| ||||||||||| |||||||| || || || || |||||
Sbjct: 397 ctcgtcgttgatcgccttgaatgaatcaggcttgacaacttccccggggttggacttgat 456
Query: 729 cagcagctgcctgttatccaagtgagtcacaacaaactggaagccacacagag-attcag 787
|||||||| ||| |||||| |||| | ||| | ||||||||||| || | || |
Sbjct: 457 gagcagctgtctgccatccaaatgagctaggacatattggaagccacagagggccctccg 516
Query: 788 tcaaggtcagggtgtgctcgtagaagaggtcatcaccctttctcttgaacttgggatgct 847
||| ||||||||||||||| ||||||| ||| ||| |||| | |||||| ||||| ||||
Sbjct: 517 tcagggtcagggtgtgctcatagaagaagtcgtcagccttccgcttgaatttggggtgct 576
Query: 848 ccttctgctggagaacaaagatgatatctccagtgacagtgtcaggcgcttcatc 902
||||||||||||| || ||||| || ||||||||||| || ||||||||||||||
Sbjct: 577 ccttctgctggaggacgaagattatgtctccagtgacggtatcaggcgcttcatc 631
>gb|AV913049.1|AV913049 AV913049 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags11j11 5', mRNA sequence
Length = 534
Score = 408 bits (206), Expect = e-112
Identities = 431/506 (85%)
Strand = Plus / Minus
Query: 445 tgctgctgctgccgcctccgcatctccgcttcgatgttcacgtcatagggcatcgtctcc 504
||||||||||| ||||||||||||| | || |||| | || |||| ||||||||||
Sbjct: 529 tgctgctgctgttgcctccgcatctcttcctcaatgtctatatcgtaggccatcgtctcc 470
Query: 505 tcgcactcgtccagctccatgtcggtgtactgcgacaccggcttgggcgggagcacagcc 564
||||||||||| ||||||||||| ||||||||||| |||||||||||||||| || | |
Sbjct: 469 tcgcactcgtctagctccatgtctgtgtactgcgatgccggcttgggcgggaggaccgtc 410
Query: 565 tccagggccttgcactgctccgggctcagcgagtccgggaactccaccgagaagtggatg 624
|| |||||||||||||| ||| |||||||||||| ||||| |||||| ||||||||||
Sbjct: 409 tcgagggccttgcactggtccaagctcagcgagtcggggaaaaccaccgtgaagtggatg 350
Query: 625 tacagcttgcccttcatgaacggcctctggtacatgggcatgccttcgtcgttgatcgcc 684
|| ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 349 tagagcttgcccttcatgaagggcctctggtacatgggcatgccctcgtcgttgatcgcc 290
Query: 685 ttgaaagaatcaggcttcacaacttcgcccggatttgatttgatcagcagctgcctgtta 744
||||| ||||||||||| |||||||| || || || || ||||| |||||||| ||| |
Sbjct: 289 ttgaatgaatcaggcttgacaacttccccggggttggacttgatgagcagctgtctgcca 230
Query: 745 tccaagtgagtcacaacaaactggaagccacacagagattcagtcaaggtcagggtgtgc 804
||||| |||| | ||| | ||||||||||| || | || |||| |||||||||||||
Sbjct: 229 tccaaatgagctaggacatattggaagccacagagggcctccgtcagggtcagggtgtgc 170
Query: 805 tcgtagaagaggtcatcaccctttctcttgaacttgggatgctccttctgctggagaaca 864
|| ||||||||||| ||| |||| | |||||| ||||| ||||||||||||||||| ||
Sbjct: 169 tcatagaagaggtcgtcagccttccgcttgaatttggggtgctccttctgctggaggacg 110
Query: 865 aagatgatatctccagtgacagtgtcaggcgcttcatcagcttcaccagggaatgtgatc 924
||||| || ||||||||||| || |||||||||||||| || || |||||||| ||||||
Sbjct: 109 aagattatgtctccagtgacggtatcaggcgcttcatctgcctcgccagggaaggtgatc 50
Query: 925 ttctgcccattctgcatgcctttctc 950
||||| |||| |||||| || |||||
Sbjct: 49 ttctgtccatgctgcatacccttctc 24
>gb|AV934096.1|AV934096 AV934096 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baalp23 5', mRNA sequence
Length = 546
Score = 408 bits (206), Expect = e-112
Identities = 397/461 (86%)
Strand = Plus / Minus
Query: 490 tagggcatcgtctcctcgcactcgtccagctccatgtcggtgtactgcgacaccggcttg 549
|||| ||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||
Sbjct: 527 taggccatcgtctcctcgcactcgtctagctccatgtctgtgtactgcgatgccggcttg 468
Query: 550 ggcgggagcacagcctccagggccttgcactgctccgggctcagcgagtccgggaactcc 609
|||||||| || | ||| |||||||||||||| ||| |||||||||||| ||||| ||
Sbjct: 467 ggcgggaggaccgtctcgagggccttgcactggtccaagctcagcgagtcggggaaaacc 408
Query: 610 accgagaagtggatgtacagcttgcccttcatgaacggcctctggtacatgggcatgcct 669
|||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 407 accgtgaagtggatgtagagcttgcccttcatgaagggcctctggtacatgggcatgccc 348
Query: 670 tcgtcgttgatcgccttgaaagaatcaggcttcacaacttcgcccggatttgatttgatc 729
|||||||||||||||||||| ||||||||||| |||||||| || || || || |||||
Sbjct: 347 tcgtcgttgatcgccttgaatgaatcaggcttgacaacttccccggggttggacttgatg 288
Query: 730 agcagctgcctgttatccaagtgagtcacaacaaactggaagccacacagagattcagtc 789
|||||||| ||| |||||| |||| | ||| | ||||||||||| || | || |||
Sbjct: 287 agcagctgtctgccatccaaatgagctaggacatattggaagccacagagggcctccgtc 228
Query: 790 aaggtcagggtgtgctcgtagaagaggtcatcaccctttctcttgaacttgggatgctcc 849
| ||||||||||||||| ||||||||||| ||| |||| | |||||| ||||| ||||||
Sbjct: 227 agggtcagggtgtgctcatagaagaggtcgtcagccttccgcttgaatttggggtgctcc 168
Query: 850 ttctgctggagaacaaagatgatatctccagtgacagtgtcaggcgcttcatcagcttca 909
||||||||||| || ||||| || ||||||||||| || |||||||||||||| || ||
Sbjct: 167 ttctgctggaggacgaagattatgtctccagtgacggtatcaggcgcttcatctgcctcg 108
Query: 910 ccagggaatgtgatcttctgcccattctgcatgcctttctc 950
|||||||| ||||||||||| |||| |||||| || |||||
Sbjct: 107 ccagggaaggtgatcttctgnccatgctgcatacccttctc 67
>gb|AV918501.1|AV918501 AV918501 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags21e09 3', mRNA sequence
Length = 615
Score = 406 bits (205), Expect = e-112
Identities = 448/528 (84%), Gaps = 6/528 (1%)
Strand = Plus / Plus
Query: 375 ctactgctgggcgcactgcaccctctgcgcgccgcc---cggcatgtcctcatcctcgtc 431
|||||||||||||||||||||||||||| ||||||| |||||| ||||| ||||||||
Sbjct: 88 ctactgctgggcgcactgcaccctctgcccgccgccgcccggcatatcctcgtcctcgtc 147
Query: 432 gtaggcctcctgg---tgctgctgctgccgcctccgcatctccgcttcgatgttcacgtc 488
||||||||||| ||||||||||| ||||||||||||| | || |||| | ||
Sbjct: 148 ataggcctcctgcgcctgctgctgctgttgcctccgcatctcttcctcaatgtctatatc 207
Query: 489 atagggcatcgtctcctcgcactcgtccagctccatgtcggtgtactgcgacaccggctt 548
|||| |||||||||||||||||| | ||||||||||| ||||||||||| |||||||
Sbjct: 208 gtaggccatcgtctcctcgcactcttntagctccatgtctgtgtactgcgatgccggctt 267
Query: 549 gggcgggagcacagcctccagggccttgcactgctccgggctcagcgagtccgggaactc 608
||||||||| || | ||| |||||||||||||| ||| |||||||||||| ||||| |
Sbjct: 268 gggcgggaggaccgtctcgagggccttgcactggtccaagctcagcgagtcggggaaaac 327
Query: 609 caccgagaagtggatgtacagcttgcccttcatgaacggcctctggtacatgggcatgcc 668
||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 328 caccgtgaagtggatgtagagcttgcccttcatgaagggcctctggtacatgggcatgcc 387
Query: 669 ttcgtcgttgatcgccttgaaagaatcaggcttcacaacttcgcccggatttgatttgat 728
|||||||||||||||||||| ||||||||||| |||||||| || || || || |||||
Sbjct: 388 ctcgtcgttgatcgccttgaatgaatcaggcttgacaacttccccggggttggacttgat 447
Query: 729 cagcagctgcctgttatccaagtgagtcacaacaaactggaagccacacagagattcagt 788
|||||||| ||| |||||| |||| | ||| | ||||||||||| || | || ||
Sbjct: 448 gagcagctgtctgccatccaaatgagctaggacatattggaagccacagagggcctccgt 507
Query: 789 caaggtcagggtgtgctcgtagaagaggtcatcaccctttctcttgaacttgggatgctc 848
|| ||||||||||||||| ||||||||||| ||| |||| | |||||| ||||| |||||
Sbjct: 508 cagggtcagggtgtgctcatagaagaggtcgtcagccttccgcttgaatttggggtgctc 567
Query: 849 cttctgctggagaacaaagatgatatctccagtgacagtgtcaggcgc 896
|||||||||||| || ||||| || ||||||||||| || ||||||||
Sbjct: 568 cttctgctggaggacgaagattatgtctccagtgacggtatcaggcgc 615
>gb|BJ547221.1|BJ547221 BJ547221 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal25k12 5', mRNA sequence
Length = 554
Score = 404 bits (204), Expect = e-111
Identities = 439/516 (85%), Gaps = 1/516 (0%)
Strand = Plus / Minus
Query: 490 tagggcatcgtctcctcgcactcgtccagctccatgtcggtgtactgcgacaccggcttg 549
|||| ||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||
Sbjct: 537 taggccatcgtctcctcgcactcgtctagctccatgtctgtgtactgcgatgccggcttg 478
Query: 550 ggcgggagcacagcctccagggccttgcactgctccgggctcagcgagtccgggaactcc 609
|||||||| || | ||| |||||||||||||| ||| |||||||||||| ||||| ||
Sbjct: 477 ggcgggaggaccgtctcgagggccttgcactggtccaagctcagcgagtcggggaaaacc 418
Query: 610 accgagaagtggatgtacagcttgcccttcatgaacggcctctggtacatgggcatgcct 669
|||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 417 accgtgaagtggatgtagagcttgcccttcatgaagggcctctggtacatgggcatgccc 358
Query: 670 tcgtcgttgatcgccttgaaagaatcaggcttcacaacttcgcccggatttgatttgatc 729
|||||||||||||||||||| ||||||||||| |||||||| || || || || |||||
Sbjct: 357 tcgtcgttgatcgccttgaatgaatcaggcttgacaacttccccggggttggacttgatg 298
Query: 730 agcagctgcctgttatccaagtgagtcacaacaaactggaagccacacagagattcagtc 789
|||||||| ||| |||||| |||| | ||| | ||||||||||| || | || |||
Sbjct: 297 agcagctgtctgccatccaaatgagctaggacatattggaagccacagagggcctccgtc 238
Query: 790 aaggtcagggtgtgctcgtagaagaggtcatcaccctttctcttgaacttgggatgctcc 849
| ||||||||||||||| ||||||||||| ||| |||| | |||||| ||||| ||||||
Sbjct: 237 agggtcagggtgtgctcatagaagaggtcgtcagccttccgcttgaatttggggtgctcc 178
Query: 850 ttctgctggagaacaaagatgatatct-ccagtgacagtgtcaggcgcttcatcagcttc 908
||||||||||| || ||||| || ||| |||||||| || |||||||||||||| || ||
Sbjct: 177 ttctgctggaggacgaagattatgtctcccagtgacggtatcaggcgcttcatctgcctc 118
Query: 909 accagggaatgtgatcttctgcccattctgcatgcctttctccacaaacacttcaagaac 968
|||||||| ||||||||||| |||| |||||| || ||||| || | ||| || || ||
Sbjct: 117 gccagggaaggtgatcttctgtccatgctgcatacccttctcgaccaccacctccaggac 58
Query: 969 cttcttctcctgcacaactttatcacccttgcactg 1004
|||||||| || || || || ||||||||||||||
Sbjct: 57 tttcttctcgtgaaccaccttctcacccttgcactg 22
>gb|BE193876.2|BE193876 HVSMEh0082M09f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0082M09f, mRNA sequence
Length = 753
Score = 402 bits (203), Expect = e-110
Identities = 428/503 (85%)
Strand = Plus / Minus
Query: 448 tgctgctgccgcctccgcatctccgcttcgatgttcacgtcatagggcatcgtctcctcg 507
||||| ||| ||||||||||||| | || |||| | ||| |||| |||||||||||||
Sbjct: 545 tgctgttgcggcctccgcatctcttcctcaatgtctatgtcgtaggccatcgtctcctcg 486
Query: 508 cactcgtccagctccatgtcggtgtactgcgacaccggcttgggcgggagcacagcctcc 567
|||||||| ||||||||||| ||||||||||| |||||||||||||||| || | |||
Sbjct: 485 cactcgtctagctccatgtccgtgtactgcgatgccggcttgggcgggaggaccgtctcg 426
Query: 568 agggccttgcactgctccgggctcagcgagtccgggaactccaccgagaagtggatgtac 627
|||||||||||||| ||| ||||||||||||| ||||| | |||| ||||||||||||
Sbjct: 425 agggccttgcactggtccaggctcagcgagtcggggaaaacaaccgtgaagtggatgtag 366
Query: 628 agcttgcccttcatgaacggcctctggtacatgggcatgccttcgtcgttgatcgccttg 687
||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 365 agcttgcccttcatgaagggcctctggtacatgggcatgccctcgtcgttgatcgccttg 306
Query: 688 aaagaatcaggcttcacaacttcgcccggatttgatttgatcagcagctgcctgttatcc 747
|| ||||||||||| |||||||| || || || || ||||| |||||||| ||| ||||
Sbjct: 305 aatgaatcaggcttgacaacttccccggggttggacttgatgagcagctgtctgccatcc 246
Query: 748 aagtgagtcacaacaaactggaagccacacagagattcagtcaaggtcagggtgtgctcg 807
|| |||| | ||| | ||||||||||| || | || |||| |||||||||||||||
Sbjct: 245 aaatgagctaggacatattggaagccacagagggcctccgtcagggtcagggtgtgctca 186
Query: 808 tagaagaggtcatcaccctttctcttgaacttgggatgctccttctgctggagaacaaag 867
||||||||||| || |||| | |||||| ||||| ||||||||||||||||| || |||
Sbjct: 185 tagaagaggtcgtcggccttccgcttgaatttggggtgctccttctgctggaggacgaag 126
Query: 868 atgatatctccagtgacagtgtcaggcgcttcatcagcttcaccagggaatgtgatcttc 927
|| || ||||||||||| || |||||||||||||| || || |||||||| |||||||||
Sbjct: 125 attatgtctccagtgacggtatcaggcgcttcatctgcctctccagggaaggtgatcttc 66
Query: 928 tgcccattctgcatgcctttctc 950
|| |||| |||||| || |||||
Sbjct: 65 tgtccatgctgcatacccttctc 43
>gb|CB877624.1|CB877624 HP05J18T HP Hordeum vulgare subsp. vulgare cDNA clone HP05J18
5-PRIME, mRNA sequence
Length = 660
Score = 400 bits (202), Expect = e-110
Identities = 541/648 (83%), Gaps = 12/648 (1%)
Strand = Plus / Minus
Query: 874 tctccagtgacagtgtcaggcgcttcatcagcttcaccagggaatgtgatcttctgccca 933
||||||||||| || |||||||||||||| || || |||||||| ||||||||||| |||
Sbjct: 652 tctccagtgacggtatcaggcgcttcatctgcctctccagggaaggtgatcttctgtcca 593
Query: 934 ttctgcatgcctttctccacaaacacttcaagaaccttcttctcctgcacaactttatca 993
| |||||| || ||||| || | ||| || || || |||||||| || || || || |||
Sbjct: 592 tgctgcatacccttctcgaccaccacctccaggactttcttctcgtgaaccaccttctca 533
Query: 994 cccttgcactgtgggcatctatccttgtcgctgattgtctctccagaacccttgcactcg 1053
||||||||||| ||| | |||||| || ||||| ||||| ||| ||| |||||||
Sbjct: 532 cccttgcactgcccgcaacgatccttatcactgatggtctcaccacttcccctgcactca 473
Query: 1054 ttgcaaggatgctgcatttgctggatcattccaggccccaactgcctgatttggacctta 1113
||||| || |||||||||||||| |||||||| || |||| ||||||||| ||||||||
Sbjct: 472 ttgcagggctgctgcatttgctgtatcattcctggtcccagctgcctgatctggaccttg 413
Query: 1114 aagccagaaccttggcaaccagcacacctcgatgaagctccagactttgaacccttacca 1173
| |||| ||||||||| || |||||| || ||||| ||||||||||||||||| |||
Sbjct: 412 taaccagcaccttggcagccggcacacttcatggaagccccagactttgaacccttgcca 353
Query: 1174 ttgcacttggagcagaggacactgcgggacagagagagcttctttgatgtgccattgtac 1233
|||||||| |||||||| ||| |||||| |||||||| ||||| ||||| |||||||||
Sbjct: 352 ttgcactttgagcagagcacattgcgggcaagagagagtttcttcgatgttccattgtac 293
Query: 1234 aaatcctccagagaaaccttcagaggatgaaccacatcatctccccgccgttgccttctg 1293
|| ||||| || |||||||||||||||||||||||| || |||| || || | |||
Sbjct: 292 aactcctcaaggctaaccttcagaggatgaaccacatcctcacccctgcgctgacgcctg 233
Query: 1294 cccctactgctg---ccacctccaaaagg---gcttccaccaccaaagaatgactggaat 1347
||||| |||||| ||||||||||| || || ||||||||||||||||| |||||
Sbjct: 232 cccctgctgctgccaccacctccaaaggggttgccgccaccaccaaagaatgattggaag 173
Query: 1348 atgtcaaagggatcatgcatcccaccaccgcctcccattccctccttgagggcatcctca 1407
|||||||| ||||| ||||| |||||| ||||||||||||||||||||||||||||||
Sbjct: 172 atgtcaaatggatcgtgcattccacca---cctcccattccctccttgagggcatcctca 116
Query: 1408 ccatattggtcatagatctctctcttttcagggtcgctgaggacctcataaccctgagct 1467
||||| || ||||||||||||| ||| ||||| || || | |||||||||| ||||||||
Sbjct: 115 ccatactgatcatagatctctcgcttctcaggatcactcaagacctcataagcctgagct 56
Query: 1468 agctccttgaacttctcggggtcgccgcccttgtcggggtggttcttg 1515
||||||||| ||||||| ||||||||||||||||| |||||||||||
Sbjct: 55 agctccttg-acttctc-gggtcgccgcccttgtc-aggtggttcttg 11
>gb|AV936347.1|AV936347 AV936347 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal10p23 3', mRNA sequence
Length = 595
Score = 396 bits (200), Expect = e-109
Identities = 420/492 (85%), Gaps = 6/492 (1%)
Strand = Plus / Plus
Query: 375 ctactgctgggcgcactgcaccctctgcgcgccgcc---cggcatgtcctcatcctcgtc 431
|||||||||||||||||||||||||||| ||||||| |||||| ||||| ||||||||
Sbjct: 100 ctactgctgggcgcactgcaccctctgcccgccgccgcccggcatatcctcgtcctcgtc 159
Query: 432 gtaggcctcctgg---tgctgctgctgccgcctccgcatctccgcttcgatgttcacgtc 488
||||||||||| ||||||||||| ||||||||||||| | || |||| | ||
Sbjct: 160 ataggcctcctgcgcctgctgctgctgttgcctccgcatctcttcctcaatgtctatatc 219
Query: 489 atagggcatcgtctcctcgcactcgtccagctccatgtcggtgtactgcgacaccggctt 548
|||| ||||||||||||||||||||| ||||||||||| ||||||||||| |||||||
Sbjct: 220 gtaggccatcgtctcctcgcactcgtctagctccatgtctgtgtactgcgatgccggctt 279
Query: 549 gggcgggagcacagcctccagggccttgcactgctccgggctcagcgagtccgggaactc 608
||||||||| || | ||| |||||||||||||| ||| |||||||||||| ||||| |
Sbjct: 280 gggcgggaggaccgtctcgagggccttgcactggtccaagctcagcgagtcggggaaaac 339
Query: 609 caccgagaagtggatgtacagcttgcccttcatgaacggcctctggtacatgggcatgcc 668
||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 340 caccgtgaagtggatgtagagcttgcccttcatgaagggcctctggtacatgggcatgcc 399
Query: 669 ttcgtcgttgatcgccttgaaagaatcaggcttcacaacttcgcccggatttgatttgat 728
|||||||||||||||||||| ||||||||||| |||||||| || || || || |||||
Sbjct: 400 ctcgtcgttgatcgccttgaatgaatcaggcttgacaacttccccggggttggacttgat 459
Query: 729 cagcagctgcctgttatccaagtgagtcacaacaaactggaagccacacagagattcagt 788
|||||||| ||| |||||| |||| | ||| | ||||||||||| || | || ||
Sbjct: 460 gagcagctgtctgccatccaaatgagctaggacatattggaagccacagagggcctccgt 519
Query: 789 caaggtcagggtgtgctcgtagaagaggtcatcaccctttctcttgaacttgggatgctc 848
|| ||||||||||||||| ||||||||||| ||| |||| | |||||| ||||| |||||
Sbjct: 520 cagggtcagggtgtgctcatagaagaggtcgtcagccttccgcttgaatttggggtgctc 579
Query: 849 cttctgctggag 860
||||||||||||
Sbjct: 580 cttctgctggag 591
>gb|BJ548460.1|BJ548460 BJ548460 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal25k12 3', mRNA sequence
Length = 584
Score = 396 bits (200), Expect = e-109
Identities = 420/492 (85%), Gaps = 6/492 (1%)
Strand = Plus / Plus
Query: 375 ctactgctgggcgcactgcaccctctgcgcgccgcc---cggcatgtcctcatcctcgtc 431
|||||||||||||||||||||||||||| ||||||| |||||| ||||| ||||||||
Sbjct: 93 ctactgctgggcgcactgcaccctctgcccgccgccgcccggcatatcctcgtcctcgtc 152
Query: 432 gtaggcctcctgg---tgctgctgctgccgcctccgcatctccgcttcgatgttcacgtc 488
||||||||||| ||||||||||| ||||||||||||| | || |||| | ||
Sbjct: 153 ataggcctcctgcgcctgctgctgctgttgcctccgcatctcttcctcaatgtctatatc 212
Query: 489 atagggcatcgtctcctcgcactcgtccagctccatgtcggtgtactgcgacaccggctt 548
|||| ||||||||||||||||||||| ||||||||||| ||||||||||| |||||||
Sbjct: 213 gtaggccatcgtctcctcgcactcgtctagctccatgtctgtgtactgcgatgccggctt 272
Query: 549 gggcgggagcacagcctccagggccttgcactgctccgggctcagcgagtccgggaactc 608
||||||||| || | ||| |||||||||||||| ||| |||||||||||| ||||| |
Sbjct: 273 gggcgggaggaccgtctcgagggccttgcactggtccaagctcagcgagtcggggaaaac 332
Query: 609 caccgagaagtggatgtacagcttgcccttcatgaacggcctctggtacatgggcatgcc 668
||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 333 caccgtgaagtggatgtagagcttgcccttcatgaagggcctctggtacatgggcatgcc 392
Query: 669 ttcgtcgttgatcgccttgaaagaatcaggcttcacaacttcgcccggatttgatttgat 728
|||||||||||||||||||| ||||||||||| |||||||| || || || || |||||
Sbjct: 393 ctcgtcgttgatcgccttgaatgaatcaggcttgacaacttccccggggttggacttgat 452
Query: 729 cagcagctgcctgttatccaagtgagtcacaacaaactggaagccacacagagattcagt 788
|||||||| ||| |||||| |||| | ||| | ||||||||||| || | || ||
Sbjct: 453 gagcagctgtctgccatccaaatgagctaggacatattggaagccacagagggcctccgt 512
Query: 789 caaggtcagggtgtgctcgtagaagaggtcatcaccctttctcttgaacttgggatgctc 848
|| ||||||||||||||| ||||||||||| ||| |||| | |||||| ||||| |||||
Sbjct: 513 cagggtcagggtgtgctcatagaagaggtcgtcagccttccgcttgaatttggggtgctc 572
Query: 849 cttctgctggag 860
||||||||||||
Sbjct: 573 cttctgctggag 584
>gb|BJ548534.1|BJ548534 BJ548534 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal29p02 3', mRNA sequence
Length = 576
Score = 396 bits (200), Expect = e-109
Identities = 420/492 (85%), Gaps = 6/492 (1%)
Strand = Plus / Plus
Query: 375 ctactgctgggcgcactgcaccctctgcgcgccgcc---cggcatgtcctcatcctcgtc 431
|||||||||||||||||||||||||||| ||||||| |||||| ||||| ||||||||
Sbjct: 81 ctactgctgggcgcactgcaccctctgcccgccgccgcccggcatatcctcgtcctcgtc 140
Query: 432 gtaggcctcctgg---tgctgctgctgccgcctccgcatctccgcttcgatgttcacgtc 488
||||||||||| ||||||||||| ||||||||||||| | || |||| | ||
Sbjct: 141 ataggcctcctgcgcctgctgctgctgttgcctccgcatctcttcctcaatgtctatatc 200
Query: 489 atagggcatcgtctcctcgcactcgtccagctccatgtcggtgtactgcgacaccggctt 548
|||| ||||||||||||||||||||| ||||||||||| ||||||||||| |||||||
Sbjct: 201 gtaggccatcgtctcctcgcactcgtctagctccatgtctgtgtactgcgatgccggctt 260
Query: 549 gggcgggagcacagcctccagggccttgcactgctccgggctcagcgagtccgggaactc 608
||||||||| || | ||| |||||||||||||| ||| |||||||||||| ||||| |
Sbjct: 261 gggcgggaggaccgtctcgagggccttgcactggtccaagctcagcgagtcggggaaaac 320
Query: 609 caccgagaagtggatgtacagcttgcccttcatgaacggcctctggtacatgggcatgcc 668
||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 321 caccgtgaagtggatgtagagcttgcccttcatgaagggcctctggtacatgggcatgcc 380
Query: 669 ttcgtcgttgatcgccttgaaagaatcaggcttcacaacttcgcccggatttgatttgat 728
|||||||||||||||||||| ||||||||||| |||||||| || || || || |||||
Sbjct: 381 ctcgtcgttgatcgccttgaatgaatcaggcttgacaacttccccggggttggacttgat 440
Query: 729 cagcagctgcctgttatccaagtgagtcacaacaaactggaagccacacagagattcagt 788
|||||||| ||| |||||| |||| | ||| | ||||||||||| || | || ||
Sbjct: 441 gagcagctgtctgccatccaaatgagctaggacatattggaagccacagagggcctccgt 500
Query: 789 caaggtcagggtgtgctcgtagaagaggtcatcaccctttctcttgaacttgggatgctc 848
|| ||||||||||||||| ||||||||||| ||| |||| | |||||| ||||| |||||
Sbjct: 501 cagggtcagggtgtgctcatagaagaggtcgtcagccttccgcttgaatttggggtgctc 560
Query: 849 cttctgctggag 860
||||||||||||
Sbjct: 561 cttctgctggag 572
>gb|BF265966.2|BF265966 HV_CEa0013M21f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0013M21f, mRNA sequence
Length = 749
Score = 394 bits (199), Expect = e-108
Identities = 284/311 (91%), Gaps = 6/311 (1%)
Strand = Plus / Minus
Query: 1324 ccaccaccaaagaatgactggaatatgtcaaagggatcatgcatcccaccaccgcctccc 1383
||||||||||||||||| ||||| |||||||| ||||||||||| ||||| |||||||
Sbjct: 406 ccaccaccaaagaatgattggaagatgtcaaatggatcatgcattccacc---gcctccc 350
Query: 1384 attccctccttgagggcatcctcaccatattggtcatagatctctctcttttcagggtcg 1443
||||||||||||||||||||||||||||| || ||||||||||||| ||| ||||| ||
Sbjct: 349 attccctccttgagggcatcctcaccatactgatcatagatctctcgcttctcaggatca 290
Query: 1444 ctgaggacctcataaccctgagctagctccttgaacttctcggggtcgccgcccttgtcg 1503
|| |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 289 ctcaggacctcataagcctgagctagttccttgaacttctcggggtcgccgcccttgtcg 230
Query: 1504 gggtggttcttgatggcggccttgcggtaggccttcttgaggtcatcctgtgacgcgtcc 1563
|||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 229 gggtggttcttgatggcggccttgcggtaggccttcttgaggtcgtcctgggacgcgtcc 170
Query: 1564 ttggaaacccccaggatctcgtagtaccgggtgttgtcgctcttcttcggcg---cgcgg 1620
|||| || ||||||||||||||||| || ||| |||||||||||||||||| |||||
Sbjct: 169 ttgggcacgcccaggatctcgtagtagcgcgtgctgtcgctcttcttcggcggcccgcgg 110
Query: 1621 ccgaacatctc 1631
|||||||||||
Sbjct: 109 ccgaacatctc 99
>gb|AV935440.1|AV935440 AV935440 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal4d04 3', mRNA sequence
Length = 575
Score = 394 bits (199), Expect = e-108
Identities = 419/491 (85%), Gaps = 6/491 (1%)
Strand = Plus / Plus
Query: 375 ctactgctgggcgcactgcaccctctgcgcgccgcc---cggcatgtcctcatcctcgtc 431
|||||||||||||||||||||||||||| ||||||| |||||| ||||| ||||||||
Sbjct: 85 ctactgctgggcgcactgcaccctctgcccgccgccgcccggcatatcctcgtcctcgtc 144
Query: 432 gtaggcctcctgg---tgctgctgctgccgcctccgcatctccgcttcgatgttcacgtc 488
||||||||||| ||||||||||| ||||||||||||| | || |||| | ||
Sbjct: 145 ataggcctcctgcgcctgctgctgctgttgcctccgcatctcttcctcaatgtctatatc 204
Query: 489 atagggcatcgtctcctcgcactcgtccagctccatgtcggtgtactgcgacaccggctt 548
|||| ||||||||||||||||||||| ||||||||||| ||||||||||| |||||||
Sbjct: 205 gtaggccatcgtctcctcgcactcgtctagctccatgtctgtgtactgcgatgccggctt 264
Query: 549 gggcgggagcacagcctccagggccttgcactgctccgggctcagcgagtccgggaactc 608
||||||||| || | ||| |||||||||||||| ||| |||||||||||| ||||| |
Sbjct: 265 gggcgggaggaccgtctcgagggccttgcactggtccaagctcagcgagtcggggaaaac 324
Query: 609 caccgagaagtggatgtacagcttgcccttcatgaacggcctctggtacatgggcatgcc 668
||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 325 caccgtgaagtggatgtagagcttgcccttcatgaagggcctctggtacatgggcatgcc 384
Query: 669 ttcgtcgttgatcgccttgaaagaatcaggcttcacaacttcgcccggatttgatttgat 728
|||||||||||||||||||| ||||||||||| |||||||| || || || || |||||
Sbjct: 385 ctcgtcgttgatcgccttgaatgaatcaggcttgacaacttccccggggttggacttgat 444
Query: 729 cagcagctgcctgttatccaagtgagtcacaacaaactggaagccacacagagattcagt 788
|||||||| ||| |||||| |||| | ||| | ||||||||||| || | || ||
Sbjct: 445 gagcagctgtctgccatccaaatgagctaggacatattggaagccacagagggcctccgt 504
Query: 789 caaggtcagggtgtgctcgtagaagaggtcatcaccctttctcttgaacttgggatgctc 848
|| ||||||||||||||| ||||||||||| ||| |||| | |||||| ||||| |||||
Sbjct: 505 cagggtcagggtgtgctcatagaagaggtcgtcagccttccgcttgaatttggggtgctc 564
Query: 849 cttctgctgga 859
|||||||||||
Sbjct: 565 cttctgctgga 575
>gb|CA017990.1|CA017990 HV07B06r HV Hordeum vulgare subsp. vulgare cDNA clone HV07B06
5-PRIME, mRNA sequence
Length = 529
Score = 394 bits (199), Expect = e-108
Identities = 370/423 (87%), Gaps = 13/423 (3%)
Strand = Plus / Minus
Query: 1219 gatgtgccattgtacaaatcctccagagaaaccttcagaggatgaaccacatca-tctcc 1277
||||| ||||||||||| ||||| || |||||||||||||||||||||||| || ||
Sbjct: 528 gatgttccattgtacaactcctcaaggctaaccttcagaggatgaaccacatccctcacc 469
Query: 1278 ccgccgttgccttctgcccctactgctgccacctcca--aaagggctt----ccaccacc 1331
|| || || | |||||||| ||||||||||| || |||||| || ||||||||
Sbjct: 468 cctgcgctgacgcctgcccctgctgctgccaccacctccaaaggggttgccgccaccacc 409
Query: 1332 aaagaatgactggaatatgtcaaagggatcatgcatcccaccaccgcctcccattccctc 1391
||||||||| ||||| |||||||| ||||| ||||| |||||||| ||||||||||||
Sbjct: 408 aaagaatgattggaagatgtcaaatggatcgtgcattccaccacc---tcccattccctc 352
Query: 1392 cttgagggcatcctcaccatattggtcatagatctctctcttttcagggtcgctgaggac 1451
||||||||||||||||||||| || ||||||||||||| ||| ||||| || || | |||
Sbjct: 351 cttgagggcatcctcaccatactgatcatagatctctcgcttctcaggatcactcaagac 292
Query: 1452 ctcataaccctgagctagctccttgaacttctcggggtcgccgcccttgtcggggtggtt 1511
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 ctcataagcctgagctagctccttgaacttctcggggtcgccgcccttgtcggggtggtt 232
Query: 1512 cttgatggcggccttgcggtaggccttcttgaggtcatcctgtgacgcgtccttggaaac 1571
|||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| ||
Sbjct: 231 cttgatggcggccttgcggtaggccttcttgaggtcgtcctgggacgcgtccttgggcac 172
Query: 1572 ccccaggatctcgtagtaccgggtgttgtcgctcttcttcggcg---cgcggccgaacat 1628
||||||||||||||||| || ||| |||||||||||||||||| |||||||||||||
Sbjct: 171 gcccaggatctcgtagtagcgcgtgctgtcgctcttcttcggcggcccgcggccgaacat 112
Query: 1629 ctc 1631
|||
Sbjct: 111 ctc 109
>gb|AL506148.1|AL506148 AL506148 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY02D05T 5',
mRNA sequence
Length = 491
Score = 387 bits (195), Expect = e-106
Identities = 283/311 (90%), Gaps = 6/311 (1%)
Strand = Plus / Minus
Query: 1324 ccaccaccaaagaatgactggaatatgtcaaagggatcatgcatcccaccaccgcctccc 1383
||||||||||||||||| ||||| |||||||| ||||| ||||| |||||||| ||||
Sbjct: 407 ccaccaccaaagaatgattggaagatgtcaaatggatcgtgcattccaccacc---tccc 351
Query: 1384 attccctccttgagggcatcctcaccatattggtcatagatctctctcttttcagggtcg 1443
||||||||||||||||||||||||||||| || ||||||||||||| ||| ||||| ||
Sbjct: 350 attccctccttgagggcatcctcaccatactgatcatagatctctcgcttctcaggatca 291
Query: 1444 ctgaggacctcataaccctgagctagctccttgaacttctcggggtcgccgcccttgtcg 1503
|| | |||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 ctcaagacctcataagcctgagctagctccttgaacttctcggggtcgccgcccttgtcg 231
Query: 1504 gggtggttcttgatggcggccttgcggtaggccttcttgaggtcatcctgtgacgcgtcc 1563
|||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 230 gggtggttcttgatggcggccttgcggtaggccttcttgaggtcgtcctgggacgcgtcc 171
Query: 1564 ttggaaacccccaggatctcgtagtaccgggtgttgtcgctcttcttcggcg---cgcgg 1620
|||| || ||||||||||||||||| || ||| |||||||||||||||||| |||||
Sbjct: 170 ttgggcacgcccaggatctcgtagtagcgcgtgctgtcgctcttcttcggcggcccgcgg 111
Query: 1621 ccgaacatctc 1631
|||||||||||
Sbjct: 110 ccgaacatctc 100
>gb|BM370867.2|BM370867 EBro04_SQ002_J15_R root, 3 week, salt-stressed, cv Optic, EBro04
Hordeum vulgare subsp. vulgare cDNA clone
EBro04_SQ002_J15 5', mRNA sequence
Length = 445
Score = 387 bits (195), Expect = e-106
Identities = 283/311 (90%), Gaps = 6/311 (1%)
Strand = Plus / Minus
Query: 1324 ccaccaccaaagaatgactggaatatgtcaaagggatcatgcatcccaccaccgcctccc 1383
||||||||||||||||| ||||| |||||||| ||||| ||||| |||||||| ||||
Sbjct: 408 ccaccaccaaagaatgattggaagatgtcaaatggatcgtgcattccaccacc---tccc 352
Query: 1384 attccctccttgagggcatcctcaccatattggtcatagatctctctcttttcagggtcg 1443
||||||||||||||||||||||||||||| || ||||||||||||| ||| ||||| ||
Sbjct: 351 attccctccttgagggcatcctcaccatactgatcatagatctctcgcttctcaggatca 292
Query: 1444 ctgaggacctcataaccctgagctagctccttgaacttctcggggtcgccgcccttgtcg 1503
|| | |||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 ctcaagacctcataagcctgagctagctccttgaacttctcggggtcgccgcccttgtcg 232
Query: 1504 gggtggttcttgatggcggccttgcggtaggccttcttgaggtcatcctgtgacgcgtcc 1563
|||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 231 gggtggttcttgatggcggccttgcggtaggccttcttgaggtcgtcctgggacgcgtcc 172
Query: 1564 ttggaaacccccaggatctcgtagtaccgggtgttgtcgctcttcttcggcg---cgcgg 1620
|||| || ||||||||||||||||| || ||| |||||||||||||||||| |||||
Sbjct: 171 ttgggcacgcccaggatctcgtagtagcgcgtgctgtcgctcttcttcggcggcccgcgg 112
Query: 1621 ccgaacatctc 1631
|||||||||||
Sbjct: 111 ccgaacatctc 101
>gb|CA003209.1|CA003209 HS09L24r HS Hordeum vulgare subsp. vulgare cDNA clone HS09L24
5-PRIME, mRNA sequence
Length = 565
Score = 387 bits (195), Expect = e-106
Identities = 283/311 (90%), Gaps = 6/311 (1%)
Strand = Plus / Minus
Query: 1324 ccaccaccaaagaatgactggaatatgtcaaagggatcatgcatcccaccaccgcctccc 1383
||||||||||||||||| ||||| |||||||| ||||| ||||| |||||||| ||||
Sbjct: 401 ccaccaccaaagaatgattggaagatgtcaaatggatcgtgcattccaccacc---tccc 345
Query: 1384 attccctccttgagggcatcctcaccatattggtcatagatctctctcttttcagggtcg 1443
||||||||||||||||||||||||||||| || ||||||||||||| ||| ||||| ||
Sbjct: 344 attccctccttgagggcatcctcaccatactgatcatagatctctcgcttctcaggatca 285
Query: 1444 ctgaggacctcataaccctgagctagctccttgaacttctcggggtcgccgcccttgtcg 1503
|| | |||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 ctcaagacctcataagcctgagctagctccttgaacttctcggggtcgccgcccttgtcg 225
Query: 1504 gggtggttcttgatggcggccttgcggtaggccttcttgaggtcatcctgtgacgcgtcc 1563
|||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 224 gggtggttcttgatggcggccttgcggtaggccttcttgaggtcgtcctgggacgcgtcc 165
Query: 1564 ttggaaacccccaggatctcgtagtaccgggtgttgtcgctcttcttcggcg---cgcgg 1620
|||| || ||||||||||||||||| || ||| |||||||||||||||||| |||||
Sbjct: 164 ttgggcacgcccaggatctcgtagtagcgcgtgctgtcgctcttcttcggcggcccgcgg 105
Query: 1621 ccgaacatctc 1631
|||||||||||
Sbjct: 104 ccgaacatctc 94
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 237,613
Number of Sequences: 312970
Number of extensions: 237613
Number of successful extensions: 75743
Number of sequences better than 0.5: 245
Number of HSP's better than 0.5 without gapping: 245
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 74786
Number of HSP's gapped (non-prelim): 638
length of query: 1681
length of database: 175,134,539
effective HSP length: 19
effective length of query: 1662
effective length of database: 169,188,109
effective search space: 281190637158
effective search space used: 281190637158
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)