BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2192958.2.2
(1723 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BU986529.1|BU986529 HF12C06r HF Hordeum vulgare subsp. v... 690 0.0
gb|CA032014.1|CA032014 HX11M05r HX Hordeum vulgare subsp. v... 646 0.0
gb|BQ460041.1|BQ460041 HA07G07r HA Hordeum vulgare subsp. v... 644 0.0
gb|BU987917.1|BU987917 HF16C03r HF Hordeum vulgare subsp. v... 640 0.0
gb|BU988005.1|BU988005 HF16G10r HF Hordeum vulgare subsp. v... 640 0.0
gb|BG367410.1|BG367410 HVSMEi0012C18f Hordeum vulgare 20 DA... 638 0.0
gb|BQ459152.1|BQ459152 HA02C15r HA Hordeum vulgare subsp. v... 638 0.0
gb|BU988955.1|BU988955 HF19E06r HF Hordeum vulgare subsp. v... 638 0.0
gb|CA014051.1|CA014051 HT10E01r HT Hordeum vulgare subsp. v... 634 e-180
gb|BU967531.1|BU967531 HB04J15r BC Hordeum vulgare subsp. v... 632 e-180
gb|BU987246.1|BU987246 HF14D12r HF Hordeum vulgare subsp. v... 632 e-180
gb|BJ447003.1|BJ447003 BJ447003 K. Sato unpublished cDNA li... 599 e-169
gb|BE420930.1|BE420930 HWM004.A07 ITEC HWM Barley Leaf Libr... 597 e-169
gb|BU978653.1|BU978653 HA13N23r HA Hordeum vulgare subsp. v... 591 e-167
gb|BU967401.1|BU967401 HB04D03r BC Hordeum vulgare subsp. v... 589 e-166
gb|AL507036.1|AL507036 AL507036 Hordeum vulgare Barke devel... 555 e-156
gb|AL507613.1|AL507613 AL507613 Hordeum vulgare Barke devel... 535 e-150
gb|BM369466.2|BM369466 EBem07_SQ003_K18_R embryo, 28 DPA, n... 517 e-145
gb|BI948387.1|BI948387 HVSMEl0009F14f Hordeum vulgare spike... 500 e-140
gb|CB882786.1|CB882786 HL02N12w HL Hordeum vulgare subsp. v... 480 e-134
gb|BE196549.2|BE196549 HVSMEh0092J17f Hordeum vulgare 5-45 ... 470 e-131
gb|BE195094.1|BE195094 HVSMEh0088E12f Hordeum vulgare 5-45 ... 468 e-130
gb|BI947010.1|BI947010 HVSMEl0003D06f Hordeum vulgare spike... 464 e-129
gb|BF624632.2|BF624632 HVSMEa0017F04f Hordeum vulgare seedl... 452 e-125
gb|BU986091.1|BU986091 HF09K01r HF Hordeum vulgare subsp. v... 448 e-124
gb|BG365674.1|BG365674 HVSMEi0003L07f Hordeum vulgare 20 DA... 440 e-122
gb|BF065487.1|BF065487 HV_CEb0012J03f Hordeum vulgare seedl... 430 e-119
gb|BQ470470.1|BQ470470 HX03B07r HX Hordeum vulgare subsp. v... 418 e-115
gb|BE421001.1|BE421001 HWM004.G06 ITEC HWM Barley Leaf Libr... 404 e-111
gb|AL511322.1|AL511322 AL511322 Hordeum vulgare Barke devel... 398 e-109
gb|BF627842.2|BF627842 HVSMEb0005P05f Hordeum vulgare seedl... 365 3e-099
gb|BQ468361.1|BQ468361 HM01A19T HM Hordeum vulgare subsp. v... 357 8e-097
gb|AV930296.1|AV930296 AV930296 K. Sato unpublished cDNA li... 351 5e-095
gb|BU998754.1|BU998754 HI12B03r HI Hordeum vulgare subsp. v... 345 3e-093
gb|BQ460661.1|BQ460661 HA06E17r HA Hordeum vulgare subsp. v... 337 7e-091
gb|BU973690.1|BU973690 HB25L17r BC Hordeum vulgare subsp. v... 337 7e-091
gb|CA002853.1|CA002853 HS08L13r HS Hordeum vulgare subsp. v... 337 7e-091
gb|CA003536.1|CA003536 HS14M16r HS Hordeum vulgare subsp. v... 337 7e-091
gb|CA009497.1|CA009497 HU14E17r HU Hordeum vulgare subsp. v... 337 7e-091
gb|CA018123.1|CA018123 HV07J04r HV Hordeum vulgare subsp. v... 337 7e-091
gb|CA018856.1|CA018856 HV09N19r HV Hordeum vulgare subsp. v... 337 7e-091
gb|CV059013.1|CV059013 BNEL43d7 Barley EST endosperm librar... 337 7e-091
gb|CA019760.1|CA019760 HV13A11r HV Hordeum vulgare subsp. v... 335 3e-090
gb|CA020023.1|CA020023 HV14B22r HV Hordeum vulgare subsp. v... 335 3e-090
gb|CA020250.1|CA020250 HV14M06r HV Hordeum vulgare subsp. v... 329 2e-088
gb|CB875982.1|CB875982 HX09O18w HX Hordeum vulgare subsp. v... 329 2e-088
gb|BQ664293.1|BQ664293 HV02L16u HV Hordeum vulgare subsp. v... 319 2e-085
gb|BQ665339.1|BQ665339 HX03B07u HX Hordeum vulgare subsp. v... 311 4e-083
gb|CA031428.1|CA031428 HX09O18r HX Hordeum vulgare subsp. v... 311 4e-083
gb|BQ761673.1|BQ761673 EBem10_SQ001_B18_R embryo, 2 Day ger... 301 4e-080
gb|AL506148.1|AL506148 AL506148 Hordeum vulgare Barke devel... 283 9e-075
gb|AL507668.1|AL507668 AL507668 Hordeum vulgare Barke devel... 283 9e-075
gb|BI776717.2|BI776717 EBpi07_SQ001_I13_R pistil, 12 DPA, n... 283 9e-075
gb|BM370867.2|BM370867 EBro04_SQ002_J15_R root, 3 week, sal... 283 9e-075
gb|BQ767061.1|BQ767061 EBro08_SQ007_I24_R root, 3 week, dro... 283 9e-075
gb|CA002173.1|CA002173 HS06L19r HS Hordeum vulgare subsp. v... 283 9e-075
gb|CA002177.1|CA002177 HS06L24r HS Hordeum vulgare subsp. v... 283 9e-075
gb|CA003209.1|CA003209 HS09L24r HS Hordeum vulgare subsp. v... 283 9e-075
gb|CA007094.1|CA007094 HU06L13r HU Hordeum vulgare subsp. v... 283 9e-075
gb|CA013492.1|CA013492 HT08K04r HT Hordeum vulgare subsp. v... 283 9e-075
gb|CA017990.1|CA017990 HV07B06r HV Hordeum vulgare subsp. v... 283 9e-075
gb|CA023375.1|CA023375 HZ46A15r HZ Hordeum vulgare subsp. v... 283 9e-075
gb|CB859939.1|CB859939 HI12B03w HI Hordeum vulgare subsp. v... 283 9e-075
gb|AJ462891.1|AJ462891 AJ462891 S00002 Hordeum vulgare subs... 280 1e-073
gb|BU983194.1|BU983194 HA28N18r HA Hordeum vulgare subsp. v... 280 1e-073
gb|BI955028.1|BI955028 HVSMEm0020O14f Hordeum vulgare green... 276 2e-072
gb|CA017133.1|CA017133 HV14M06u HV Hordeum vulgare subsp. v... 276 2e-072
gb|BQ754405.1|BQ754405 EBca01_SQ003_N18_R carpel, pre-anthe... 272 4e-071
gb|BI947601.1|BI947601 HVSMEl0006A21f Hordeum vulgare spike... 270 1e-070
gb|BQ765166.1|BQ765166 EBro03_SQ006_N12_R root, 3 week, wat... 268 6e-070
gb|BF625733.2|BF625733 HVSMEa0013G20f Hordeum vulgare seedl... 266 2e-069
gb|BF616622.2|BF616622 HVSMEc0010N09f Hordeum vulgare seedl... 264 9e-069
gb|AJ462890.1|AJ462890 AJ462890 S00002 Hordeum vulgare subs... 262 3e-068
gb|BE559324.1|BE559324 HV_CEb0024B22f Hordeum vulgare seedl... 258 5e-067
gb|BF265760.2|BF265760 HV_CEa0013E07f Hordeum vulgare seedl... 258 5e-067
gb|BF265966.2|BF265966 HV_CEa0013M21f Hordeum vulgare seedl... 258 5e-067
gb|AV924641.1|AV924641 AV924641 K. Sato unpublished cDNA li... 258 5e-067
gb|AV926309.1|AV926309 AV926309 K. Sato unpublished cDNA li... 258 5e-067
gb|AV932975.1|AV932975 AV932975 K. Sato unpublished cDNA li... 258 5e-067
gb|CA000372.1|CA000372 HS08L13u HS Hordeum vulgare subsp. v... 258 5e-067
gb|BJ547080.1|BJ547080 BJ547080 K. Sato unpublished cDNA li... 258 5e-067
gb|BJ547294.1|BJ547294 BJ547294 K. Sato unpublished cDNA li... 258 5e-067
gb|BJ547556.1|BJ547556 BJ547556 K. Sato unpublished cDNA li... 258 5e-067
gb|BG365672.1|BG365672 HVSMEi0003L05f Hordeum vulgare 20 DA... 244 8e-063
gb|BJ547588.1|BJ547588 BJ547588 K. Sato unpublished cDNA li... 238 5e-061
gb|AV915331.1|AV915331 AV915331 K. Sato unpublished cDNA li... 232 3e-059
gb|AV932812.1|AV932812 AV932812 K. Sato unpublished cDNA li... 230 1e-058
gb|AV933573.1|AV933573 AV933573 K. Sato unpublished cDNA li... 230 1e-058
gb|BJ471254.1|BJ471254 BJ471254 K. Sato unpublished cDNA li... 230 1e-058
gb|BJ547299.1|BJ547299 BJ547299 K. Sato unpublished cDNA li... 230 1e-058
gb|BJ547912.1|BJ547912 BJ547912 K. Sato unpublished cDNA li... 230 1e-058
gb|BF616389.2|BF616389 HVSMEc0007C16f Hordeum vulgare seedl... 228 5e-058
gb|BJ455006.1|BJ455006 BJ455006 K. Sato unpublished cDNA li... 228 5e-058
gb|BF267676.2|BF267676 HV_CEa0018J08f Hordeum vulgare seedl... 220 1e-055
gb|AV934096.1|AV934096 AV934096 K. Sato unpublished cDNA li... 216 2e-054
gb|BJ451484.1|BJ451484 BJ451484 K. Sato unpublished cDNA li... 216 2e-054
gb|BJ547221.1|BJ547221 BJ547221 K. Sato unpublished cDNA li... 216 2e-054
gb|AV913049.1|AV913049 AV913049 K. Sato unpublished cDNA li... 214 7e-054
gb|BQ754331.1|BQ754331 EBca01_SQ003_J15_R carpel, pre-anthe... 214 7e-054
gb|BJ548555.1|BJ548555 BJ548555 K. Sato unpublished cDNA li... 214 7e-054
gb|BJ548639.1|BJ548639 BJ548639 K. Sato unpublished cDNA li... 214 7e-054
gb|BJ549776.1|BJ549776 BJ549776 K. Sato unpublished cDNA li... 214 7e-054
gb|BJ549828.1|BJ549828 BJ549828 K. Sato unpublished cDNA li... 212 3e-053
gb|BJ549377.1|BJ549377 BJ549377 K. Sato unpublished cDNA li... 210 1e-052
gb|BU998787.1|BU998787 HI12C19r HI Hordeum vulgare subsp. v... 208 4e-052
gb|BJ549026.1|BJ549026 BJ549026 K. Sato unpublished cDNA li... 208 4e-052
gb|BE193876.2|BE193876 HVSMEh0082M09f Hordeum vulgare 5-45 ... 204 7e-051
gb|BU988719.1|BU988719 HF18H21r HF Hordeum vulgare subsp. v... 204 7e-051
gb|BM368741.2|BM368741 EBem08_SQ004_H16_R embryo, 40 DPA, n... 202 3e-050
gb|CA003896.1|CA003896 HS15P12r HS Hordeum vulgare subsp. v... 196 2e-048
gb|BQ764206.1|BQ764206 EBan01_SQ005_M06_R anther, yellow st... 192 3e-047
gb|BI953415.1|BI953415 HVSMEm0012J14f Hordeum vulgare green... 190 1e-046
gb|AV918791.1|AV918791 AV918791 K. Sato unpublished cDNA li... 186 2e-045
gb|AV918185.1|AV918185 AV918185 K. Sato unpublished cDNA li... 182 3e-044
gb|AV935618.1|AV935618 AV935618 K. Sato unpublished cDNA li... 182 3e-044
gb|CA017279.1|CA017279 HV14B22u HV Hordeum vulgare subsp. v... 182 3e-044
gb|BE194325.1|BE194325 HVSMEh0085C11f Hordeum vulgare 5-45 ... 178 4e-043
gb|AL504114.1|AL504114 AL504114 Hordeum vulgare Barke roots... 176 2e-042
gb|AV913207.1|AV913207 AV913207 K. Sato unpublished cDNA li... 172 2e-041
gb|BG310064.1|BG310064 HVSMEc0016D22f Hordeum vulgare seedl... 170 1e-040
gb|AV918501.1|AV918501 AV918501 K. Sato unpublished cDNA li... 170 1e-040
gb|CA030030.1|CA030030 HX05O04r HX Hordeum vulgare subsp. v... 170 1e-040
gb|AV913448.1|AV913448 AV913448 K. Sato unpublished cDNA li... 168 4e-040
gb|AV913493.1|AV913493 AV913493 K. Sato unpublished cDNA li... 168 4e-040
gb|AV923044.1|AV923044 AV923044 K. Sato unpublished cDNA li... 168 4e-040
gb|AV931194.1|AV931194 AV931194 K. Sato unpublished cDNA li... 168 4e-040
gb|BM442619.2|BM442619 EBan01_SQ003_L01_R anther, yellow st... 168 4e-040
gb|BM370320.2|BM370320 EBro08_SQ003_N09_R root, 3 week, dro... 165 6e-039
gb|BQ754039.1|BQ754039 EBca01_SQ002_K06_R carpel, pre-anthe... 165 6e-039
gb|BQ763089.1|BQ763089 EBro02_SQ007_L03_R root, 3 week, hyd... 163 2e-038
gb|CB859966.1|CB859966 HI12C19w HI Hordeum vulgare subsp. v... 163 2e-038
gb|AV918750.1|AV918750 AV918750 K. Sato unpublished cDNA li... 161 9e-038
gb|AV926156.1|AV926156 AV926156 K. Sato unpublished cDNA li... 159 4e-037
gb|AL510900.1|AL510900 AL510900 Hordeum vulgare Barke devel... 155 6e-036
gb|AV914052.1|AV914052 AV914052 K. Sato unpublished cDNA li... 155 6e-036
gb|BM374239.2|BM374239 EBpi03_SQ003_B01_R pistil, 4 DPA, no... 151 9e-035
gb|CA024539.1|CA024539 HZ49J12r HZ Hordeum vulgare subsp. v... 147 1e-033
gb|AL508070.1|AL508070 AL508070 Hordeum vulgare Barke devel... 141 9e-032
gb|AV936347.1|AV936347 AV936347 K. Sato unpublished cDNA li... 139 3e-031
gb|BJ548534.1|BJ548534 BJ548534 K. Sato unpublished cDNA li... 139 3e-031
gb|AL510456.1|AL510456 AL510456 Hordeum vulgare Barke devel... 131 8e-029
gb|BJ548460.1|BJ548460 BJ548460 K. Sato unpublished cDNA li... 131 8e-029
gb|AV935440.1|AV935440 AV935440 K. Sato unpublished cDNA li... 129 3e-028
gb|CB876590.1|CB876590 HX11M05w HX Hordeum vulgare subsp. v... 125 5e-027
gb|AV923699.1|AV923699 AV923699 K. Sato unpublished cDNA li... 123 2e-026
gb|CA027461.1|CA027461 HZ58P24r HZ Hordeum vulgare subsp. v... 123 2e-026
gb|BJ547884.1|BJ547884 BJ547884 K. Sato unpublished cDNA li... 121 8e-026
gb|BJ548050.1|BJ548050 BJ548050 K. Sato unpublished cDNA li... 121 8e-026
gb|CB877624.1|CB877624 HP05J18T HP Hordeum vulgare subsp. v... 121 8e-026
gb|BJ448413.1|BJ448413 BJ448413 K. Sato unpublished cDNA li... 119 3e-025
gb|BJ549392.1|BJ549392 BJ549392 K. Sato unpublished cDNA li... 119 3e-025
gb|AV936006.1|AV936006 AV936006 K. Sato unpublished cDNA li... 115 5e-024
gb|AV929735.1|AV929735 AV929735 K. Sato unpublished cDNA li... 113 2e-023
gb|AV917803.1|AV917803 AV917803 K. Sato unpublished cDNA li... 111 8e-023
gb|BJ458979.1|BJ458979 BJ458979 K. Sato unpublished cDNA li... 107 1e-021
gb|BF065913.3|BF065913 HV_CEb0014F12f Hordeum vulgare seedl... 101 8e-020
gb|AV919081.1|AV919081 AV919081 K. Sato unpublished cDNA li... 101 8e-020
gb|AV921881.1|AV921881 AV921881 K. Sato unpublished cDNA li... 101 8e-020
gb|BJ549059.1|BJ549059 BJ549059 K. Sato unpublished cDNA li... 101 8e-020
gb|AJ435921.1|AJ435921 AJ435921 S00002 Hordeum vulgare subs... 96 5e-018
gb|BI781165.2|BI781165 EBma03_SQ001_K06_R maternal, 8 DPA, ... 96 5e-018
gb|BU999535.1|BU999535 HI14M21r HI Hordeum vulgare subsp. v... 96 5e-018
gb|CB874739.1|CB874739 HX06C21w HX Hordeum vulgare subsp. v... 96 5e-018
gb|BQ756054.1|BQ756054 EBem05_SQ001_H16_R embryo, 14 DPA, n... 94 2e-017
gb|AV925669.1|AV925669 AV925669 K. Sato unpublished cDNA li... 92 7e-017
gb|BF262852.2|BF262852 HV_CEa0005C06f Hordeum vulgare seedl... 90 3e-016
gb|AJ436123.1|AJ436123 AJ436123 S00002 Hordeum vulgare subs... 90 3e-016
gb|BJ456136.1|BJ456136 BJ456136 K. Sato unpublished cDNA li... 90 3e-016
gb|CA000804.1|CA000804 HS06L19u HS Hordeum vulgare subsp. v... 90 3e-016
gb|CA027563.1|CA027563 HZ59F03r HZ Hordeum vulgare subsp. v... 90 3e-016
gb|CA027458.1|CA027458 HZ58P20r HZ Hordeum vulgare subsp. v... 88 1e-015
gb|BM100471.2|BM100471 EBma01_SQ005_F02_R maternal, 4 DPA, ... 86 4e-015
gb|CV055183.1|CV055183 BNEL117g3 Barley EST endosperm libra... 86 4e-015
gb|CV063398.1|CV063398 BNEL89h12 Barley EST endosperm libra... 86 4e-015
gb|BF257618.2|BF257618 HVSMEf0013F22f Hordeum vulgare seedl... 84 2e-014
gb|BF260166.2|BF260166 HVSMEf0021E13f Hordeum vulgare seedl... 84 2e-014
gb|BE216076.2|BE216076 HV_CEb0009F11f Hordeum vulgare seedl... 84 2e-014
gb|AV913940.1|AV913940 AV913940 K. Sato unpublished cDNA li... 84 2e-014
gb|BQ464485.1|BQ464485 HF02G16r HF Hordeum vulgare subsp. v... 84 2e-014
gb|BQ465243.1|BQ465243 HU03A18r HU Hordeum vulgare subsp. v... 84 2e-014
gb|BQ758588.1|BQ758588 EBma07_SQ002_O03_R maternal, 21 DPA,... 84 2e-014
gb|BU990375.1|BU990375 HF24N12r HF Hordeum vulgare subsp. v... 84 2e-014
gb|CA011986.1|CA011986 HT04B17r HT Hordeum vulgare subsp. v... 84 2e-014
gb|CA027033.1|CA027033 HZ57L06r HZ Hordeum vulgare subsp. v... 84 2e-014
gb|BJ544004.1|BJ544004 BJ544004 K. Sato unpublished cDNA li... 84 2e-014
gb|BF266282.2|BF266282 HV_CEa0014L02f Hordeum vulgare seedl... 82 7e-014
gb|BE216060.2|BE216060 HV_CEb0009E14f Hordeum vulgare seedl... 82 7e-014
gb|AV925145.1|AV925145 AV925145 K. Sato unpublished cDNA li... 82 7e-014
gb|AL509560.1|AL509560 AL509560 Hordeum vulgare Barke devel... 76 4e-012
gb|CB878788.1|CB878788 HP09M21T HP Hordeum vulgare subsp. v... 76 4e-012
gb|BJ544857.1|BJ544857 BJ544857 K. Sato unpublished cDNA li... 72 7e-011
gb|AL510951.1|AL510951 AL510951 Hordeum vulgare Barke devel... 70 3e-010
gb|CA008057.1|CA008057 HU09M12r HU Hordeum vulgare subsp. v... 68 1e-009
gb|BQ471536.1|BQ471536 HV02L16r HV Hordeum vulgare subsp. v... 60 3e-007
gb|AV916937.1|AV916937 AV916937 K. Sato unpublished cDNA li... 58 1e-006
gb|BG309549.1|BG309549 HVSMEc0011A02f Hordeum vulgare seedl... 54 2e-005
gb|BF259025.2|BF259025 HVSMEf0017H02f Hordeum vulgare seedl... 54 2e-005
gb|BI950800.1|BI950800 HVSMEl0023D18f Hordeum vulgare spike... 54 2e-005
gb|BF257366.3|BF257366 HVSMEf0012L04f Hordeum vulgare seedl... 54 2e-005
gb|BG344813.2|BG344813 HVSMEg0016C23f Hordeum vulgare pre-a... 54 2e-005
gb|BQ467353.1|BQ467353 HS03H23r HS Hordeum vulgare subsp. v... 54 2e-005
gb|BQ467403.1|BQ467403 HS03K10r HS Hordeum vulgare subsp. v... 54 2e-005
gb|CA012322.1|CA012322 HT05B17r HT Hordeum vulgare subsp. v... 54 2e-005
gb|CA014740.1|CA014740 HT12D14r HT Hordeum vulgare subsp. v... 54 2e-005
gb|CA032582.1|CA032582 HX13I12r HX Hordeum vulgare subsp. v... 54 2e-005
gb|BF261461.2|BF261461 HV_CEa0001F14f Hordeum vulgare seedl... 52 6e-005
gb|BM817108.1|BM817108 HC02A07_T3.ab1 HC Hordeum vulgare su... 52 6e-005
gb|AW983459.2|AW983459 HVSMEg0010L09f Hordeum vulgare pre-a... 50 2e-004
gb|CK125297.1|CK125297 BES1824107j24 BES1824 Hordeum vulgar... 48 0.001
gb|BI949923.1|BI949923 HVSMEl0016P24f Hordeum vulgare spike... 44 0.015
gb|BE215945.2|BE215945 HV_CEb0008O15f Hordeum vulgare seedl... 42 0.060
gb|BM097533.2|BM097533 EBem04_SQ001_O07_R embryo, 12 DPA, n... 42 0.060
gb|BQ753920.1|BQ753920 EBca01_SQ002_E10_R carpel, pre-anthe... 42 0.060
gb|CA021268.1|CA021268 HZ39J16r HZ Hordeum vulgare subsp. v... 42 0.060
emb|AJ272313.1|HVU272313 Hordeum vulgare mRNA for gamma tub... 42 0.060
gb|AV832799.1|AV832799 AV832799 K. Sato unpublished cDNA li... 40 0.24
gb|BG343924.1|BG343924 HVSMEg0007C04f Hordeum vulgare pre-a... 40 0.24
gb|BM097845.2|BM097845 EBem04_SQ002_N22_R embryo, 12 DPA, n... 40 0.24
gb|BI780669.2|BI780669 EBes01_SQ001_L09_R embryo sac, 4-6 D... 40 0.24
gb|CA002818.1|CA002818 HS08J22r HS Hordeum vulgare subsp. v... 40 0.24
gb|AL501450.1|AL501450 AL501450 Hordeum vulgare Barke roots... 38 0.94
gb|BG414677.1|BG414677 HVSMEk0003F07f Hordeum vulgare testa... 38 0.94
gb|BU971318.1|BU971318 HB17E08r BC Hordeum vulgare subsp. v... 38 0.94
gb|BF260109.1|BF260109 HVSMEf0021C04f Hordeum vulgare seedl... 36 3.7
gb|BF631070.2|BF631070 HVSMEb0014O07f Hordeum vulgare seedl... 36 3.7
gb|BM444402.1|BM444402 EBem09_SQ005_B17_R embryo, 1 Day ger... 36 3.7
gb|BJ469566.1|BJ469566 BJ469566 K. Sato unpublished cDNA li... 36 3.7
gb|BM440844.2|BM440844 EBca01_SQ001_G01_R carpel, pre-anthe... 36 3.7
gb|BM371934.2|BM371934 EBma08_SQ004_H03_R maternal, 28 DPA,... 36 3.7
gb|BU970520.1|BU970520 HB14O07r BC Hordeum vulgare subsp. v... 36 3.7
gb|BU974841.1|BU974841 HB29E10r BC Hordeum vulgare subsp. v... 36 3.7
gb|BJ548203.1|BJ548203 BJ548203 K. Sato unpublished cDNA li... 36 3.7
>gb|BU986529.1|BU986529 HF12C06r HF Hordeum vulgare subsp. vulgare cDNA clone HF12C06
5-PRIME, mRNA sequence
Length = 681
Score = 690 bits (348), Expect = 0.0
Identities = 591/672 (87%)
Strand = Plus / Minus
Query: 670 gcttccccttcatgaaaggcctctggtaaatcggcatcccctcatcgtttattgccttga 729
|||| ||||||||||||||||||||||| |||||||| ||||| ||| | ||||||||||
Sbjct: 681 gcttgcccttcatgaaaggcctctggtacatcggcattccctcgtcgctgattgccttga 622
Query: 730 attggtcaggtttaacaacttcaccagggtctgatttgatgagaagctgcctgttgtcca 789
|| ||||| || |||||||||||||||| |||||| ||||| ||||||||||||||||
Sbjct: 621 atgaatcaggcttgacaacttcaccagggtttgatttaatgagcagctgcctgttgtcca 562
Query: 790 gatgtgtaagaacaaattggaacccacatagtgcttcggtcagagacaaggtgtgctcat 849
|||| || | ||| | |||||||||||| || ||||| || ||||| | |||||||||||
Sbjct: 561 gatgggtcaaaacgagttggaacccacaaagagcttcagtgagagatatggtgtgctcat 502
Query: 850 agaagagatcttcaccctttcttttgaacttggagtggtccttctgctggaggacgaata 909
|||||||||| |||||||| | |||||||| | ||| ||||||||||||| ||| ||||
Sbjct: 501 agaagagatcatcacccttccgcttgaacttcgggtgttccttctgctggacgacaaata 442
Query: 910 caatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatcttct 969
|||||||||||||||| || |||||||| ||||||||||| |||||||||||||||||||
Sbjct: 441 caatgtctccagtaacagtgtcaggcgcctcatcagcttccccagggaaggtgatcttct 382
Query: 970 ggctgtgttgcattcccttctcaacatgaacctcaagaaccttcttctcctgaacgacct 1029
|| |||||||||| |||||||||||||||||||| | ||| ||||||||||||| ||||
Sbjct: 381 ggttgtgttgcatccccttctcaacatgaacctccaaaactttcttctcctgaagaacct 322
Query: 1030 tctcacccttacaccctgggcagcggtccttctcgttgatgctctccccagtccccttgc 1089
|||||||||| || ||||||||||| || || ||||| || ||||||||||| |||||||
Sbjct: 321 tctcacccttgcagcctgggcagcgatctttgtcgttaatactctccccagtgcccttgc 262
Query: 1090 actcgttgcaaggctgctgcatctgctgtatcatggaaggccccagctgacgaatggtga 1149
| || ||||| | ||||||| ||||||||||||||||||||||||||||||||| || |
Sbjct: 261 aatcattgcaggcatgctgcacctgctgtatcatggaaggccccagctgacgaatagtca 202
Query: 1150 ctttcatacctgagccctggcacccagggcacctcattgaagcaccagacttcgagccct 1209
| ||||| ||||| |||||||| || ||||||||||| |||||||||||||| |||||||
Sbjct: 201 ccttcatgcctgaaccctggcaacctgggcacctcatggaagcaccagacttggagccct 142
Query: 1210 tgcccttgcacttggagcagatgacattgcgcgaaagagagagcttctttgagattccat 1269
||||||||||||||||||||| |||| | || ||||||||||||||||||||| | ||||
Sbjct: 141 tgcccttgcacttggagcagaggacactacgggaaagagagagcttctttgaggtaccat 82
Query: 1270 tgtaaagatcttccagagaaactttaagtgagtggactacatcttctcccctcctttgcc 1329
||||||||||||| |||||| ||||||||| ||||| ||||| ||||||||||||||||
Sbjct: 81 tgtaaagatcttctagagaagctttaagtggatggacaacatcctctcccctcctttgcc 22
Query: 1330 ttcttcccctgc 1341
|||| |||||||
Sbjct: 21 ttctgcccctgc 10
>gb|CA032014.1|CA032014 HX11M05r HX Hordeum vulgare subsp. vulgare cDNA clone HX11M05
5-PRIME, mRNA sequence
Length = 653
Score = 646 bits (326), Expect = 0.0
Identities = 551/626 (88%)
Strand = Plus / Minus
Query: 720 attgccttgaattggtcaggtttaacaacttcaccagggtctgatttgatgagaagctgc 779
|||||||||||| ||||| || |||||||||||||||| |||||| ||||| ||||||
Sbjct: 643 attgccttgaatgaatcaggcttgacaacttcaccagggtttgatttaatgagcagctgc 584
Query: 780 ctgttgtccagatgtgtaagaacaaattggaacccacatagtgcttcggtcagagacaag 839
|||||||||||||| || | ||| | |||||||||||| || ||||| || ||||| | |
Sbjct: 583 ctgttgtccagatgggtcaaaacgagttggaacccacaaagagcttcagtgagagatatg 524
Query: 840 gtgtgctcatagaagagatcttcaccctttcttttgaacttggagtggtccttctgctgg 899
|||||||||||||||||||| |||||||| | |||||||| | ||| ||||||||||||
Sbjct: 523 gtgtgctcatagaagagatcatcacccttccgcttgaacttcgggtgttccttctgctgg 464
Query: 900 aggacgaatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaag 959
| ||| |||||||||||||||||||| || |||||||| ||||||||||| |||||||||
Sbjct: 463 acgacaaatacaatgtctccagtaacagtgtcaggcgcctcatcagcttccccagggaag 404
Query: 960 gtgatcttctggctgtgttgcattcccttctcaacatgaacctcaagaaccttcttctcc 1019
|||||||||||| |||||||||| |||||||||||||||||||| | ||| |||||||||
Sbjct: 403 gtgatcttctggttgtgttgcatccccttctcaacatgaacctccaaaactttcttctcc 344
Query: 1020 tgaacgaccttctcacccttacaccctgggcagcggtccttctcgttgatgctctcccca 1079
|||| |||||||||||||| || ||||||||||| || || ||||| || |||||||||
Sbjct: 343 tgaagaaccttctcacccttgcagcctgggcagcgatctttgtcgttaatactctcccca 284
Query: 1080 gtccccttgcactcgttgcaaggctgctgcatctgctgtatcatggaaggccccagctga 1139
|| |||||||| || ||||| | ||||||| ||||||||||||||||||||||||||||
Sbjct: 283 gtgcccttgcaatcattgcaggcatgctgcacctgctgtatcatggaaggccccagctga 224
Query: 1140 cgaatggtgactttcatacctgagccctggcacccagggcacctcattgaagcaccagac 1199
||||| || || ||||| ||||| |||||||| || ||||||||||| ||||||||||||
Sbjct: 223 cgaatagtcaccttcatgcctgaaccctggcaacctgggcacctcatggaagcaccagac 164
Query: 1200 ttcgagcccttgcccttgcacttggagcagatgacattgcgcgaaagagagagcttcttt 1259
|| |||||||||||||||||||||||||||| |||| | || ||||||||||||||||||
Sbjct: 163 ttggagcccttgcccttgcacttggagcagaggacactacgggaaagagagagcttcttt 104
Query: 1260 gagattccattgtaaagatcttccagagaaactttaagtgagtggactacatcttctccc 1319
||| | ||||||||||||||||| |||||| ||||||||| ||||| ||||| ||||||
Sbjct: 103 gaggtaccattgtaaagatcttctagagaagctttaagtggatggacaacatcctctccc 44
Query: 1320 ctcctttgccttcttcccctgctgct 1345
|||||||||||||| |||||||||||
Sbjct: 43 ctcctttgccttctgcccctgctgct 18
>gb|BQ460041.1|BQ460041 HA07G07r HA Hordeum vulgare subsp. vulgare cDNA clone HA07G07
5-PRIME, mRNA sequence
Length = 641
Score = 644 bits (325), Expect = 0.0
Identities = 553/629 (87%)
Strand = Plus / Minus
Query: 669 agcttccccttcatgaaaggcctctggtaaatcggcatcccctcatcgtttattgccttg 728
||||| ||||||||||||||||||||||| |||||||| ||||| ||| | |||||||||
Sbjct: 639 agcttgcccttcatgaaaggcctctggtacatcggcattccctcgtcgctgattgccttg 580
Query: 729 aattggtcaggtttaacaacttcaccagggtctgatttgatgagaagctgcctgttgtcc 788
||| ||||| || |||||||||||||||| |||||| ||||| |||||||||||||||
Sbjct: 579 aatgaatcaggcttgacaacttcaccagggtttgatttaatgagcagctgcctgttgtcc 520
Query: 789 agatgtgtaagaacaaattggaacccacatagtgcttcggtcagagacaaggtgtgctca 848
||||| || | ||| | |||||||||||| || ||||| || ||||| | ||||||||||
Sbjct: 519 agatgggtcaaaacgagttggaacccacaaagagcttcagtgagagatatggtgtgctca 460
Query: 849 tagaagagatcttcaccctttcttttgaacttggagtggtccttctgctggaggacgaat 908
||||||||||| |||||||| | |||||||| | ||| ||||||||||||| ||| |||
Sbjct: 459 tagaagagatcatcacccttccgcttgaacttcgggtgttccttctgctggacgacaaat 400
Query: 909 acaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatcttc 968
||||||||||||||||| || |||||||| ||||||||||| ||||||||||||||||||
Sbjct: 399 acaatgtctccagtaacagtgtcaggcgcctcatcagcttccccagggaaggtgatcttc 340
Query: 969 tggctgtgttgcattcccttctcaacatgaacctcaagaaccttcttctcctgaacgacc 1028
||| |||||||||| |||||||||||||||||||| | ||| ||||||||||||| |||
Sbjct: 339 tggttgtgttgcatccccttctcaacatgaacctccaaaactttcttctcctgaagaacc 280
Query: 1029 ttctcacccttacaccctgggcagcggtccttctcgttgatgctctccccagtccccttg 1088
||||||||||| || ||||||||||| || || ||||| || ||||||||||| ||||||
Sbjct: 279 ttctcacccttgcagcctgggcagcgatctttgtcgttaatactctccccagtgcccttg 220
Query: 1089 cactcgttgcaaggctgctgcatctgctgtatcatggaaggccccagctgacgaatggtg 1148
|| || ||||| | ||||||| ||||||||||||||||||||||||||||||||| ||
Sbjct: 219 caatcattgcaggcatgctgcacctgctgtatcatggaaggccccagctgacgaatagtc 160
Query: 1149 actttcatacctgagccctggcacccagggcacctcattgaagcaccagacttcgagccc 1208
|| ||||| ||||| |||||||| || ||||||||||| |||||||||||||| ||||||
Sbjct: 159 accttcatgcctgaaccctggcaacctgggcacctcatggaagcaccagacttggagccc 100
Query: 1209 ttgcccttgcacttggagcagatgacattgcgcgaaagagagagcttctttgagattcca 1268
|||||||||||||||||||||| |||| | || ||||||||||||||||||||| | |||
Sbjct: 99 ttgcccttgcacttggagcagaggacactacgggaaagagagagcttctttgaggtacca 40
Query: 1269 ttgtaaagatcttccagagaaactttaag 1297
|||||||||||||| |||||| |||||||
Sbjct: 39 ttgtaaagatcttctagagaagctttaag 11
>gb|BU987917.1|BU987917 HF16C03r HF Hordeum vulgare subsp. vulgare cDNA clone HF16C03
5-PRIME, mRNA sequence
Length = 639
Score = 640 bits (323), Expect = 0.0
Identities = 551/627 (87%)
Strand = Plus / Minus
Query: 669 agcttccccttcatgaaaggcctctggtaaatcggcatcccctcatcgtttattgccttg 728
||||| ||||||||||||||||||||||| |||||||| ||||| ||| | |||||||||
Sbjct: 637 agcttgcccttcatgaaaggcctctggtacatcggcattccctcgtcgctgattgccttg 578
Query: 729 aattggtcaggtttaacaacttcaccagggtctgatttgatgagaagctgcctgttgtcc 788
||| ||||| || |||||||||||||||| |||||| ||||| |||||||||||||||
Sbjct: 577 aatgaatcaggcttgacaacttcaccagggtttgatttaatgagcagctgcctgttgtcc 518
Query: 789 agatgtgtaagaacaaattggaacccacatagtgcttcggtcagagacaaggtgtgctca 848
||||| || | ||| | |||||||||||| || ||||| || ||||| | ||||||||||
Sbjct: 517 agatgggtcaaaacgagttggaacccacaaagagcttcagtgagagatatggtgtgctca 458
Query: 849 tagaagagatcttcaccctttcttttgaacttggagtggtccttctgctggaggacgaat 908
||||||||||| |||||||| | |||||||| | ||| ||||||||||||| ||| |||
Sbjct: 457 tagaagagatcatcacccttccgcttgaacttcgggtgttccttctgctggacgacaaat 398
Query: 909 acaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatcttc 968
||||||||||||||||| || |||||||| ||||||||||| ||||||||||||||||||
Sbjct: 397 acaatgtctccagtaacagtgtcaggcgcctcatcagcttccccagggaaggtgatcttc 338
Query: 969 tggctgtgttgcattcccttctcaacatgaacctcaagaaccttcttctcctgaacgacc 1028
||| |||||||||| |||||||||||||||||||| | ||| ||||||||||||| |||
Sbjct: 337 tggttgtgttgcatccccttctcaacatgaacctccaaaactttcttctcctgaagaacc 278
Query: 1029 ttctcacccttacaccctgggcagcggtccttctcgttgatgctctccccagtccccttg 1088
||||||||||| || ||||||||||| || || ||||| || ||||||||||| ||||||
Sbjct: 277 ttctcacccttgcagcctgggcagcgatctttgtcgttaatactctccccagtgcccttg 218
Query: 1089 cactcgttgcaaggctgctgcatctgctgtatcatggaaggccccagctgacgaatggtg 1148
|| || ||||| | ||||||| ||||||||||||||||||||||||||||||||| ||
Sbjct: 217 caatcattgcaggcatgctgcacctgctgtatcatggaaggccccagctgacgaatagtc 158
Query: 1149 actttcatacctgagccctggcacccagggcacctcattgaagcaccagacttcgagccc 1208
|| ||||| ||||| |||||||| || ||||||||||| |||||||||||||| ||||||
Sbjct: 157 accttcatgcctgaaccctggcaacctgggcacctcatggaagcaccagacttggagccc 98
Query: 1209 ttgcccttgcacttggagcagatgacattgcgcgaaagagagagcttctttgagattcca 1268
|||||||||||||||||||||| |||| | || ||||||||||||||||||||| | |||
Sbjct: 97 ttgcccttgcacttggagcagaggacactacgggaaagagagagcttctttgaggtacca 38
Query: 1269 ttgtaaagatcttccagagaaacttta 1295
|||||||||||||| |||||| |||||
Sbjct: 37 ttgtaaagatcttctagagaagcttta 11
>gb|BU988005.1|BU988005 HF16G10r HF Hordeum vulgare subsp. vulgare cDNA clone HF16G10
5-PRIME, mRNA sequence
Length = 639
Score = 640 bits (323), Expect = 0.0
Identities = 551/627 (87%)
Strand = Plus / Minus
Query: 669 agcttccccttcatgaaaggcctctggtaaatcggcatcccctcatcgtttattgccttg 728
||||| ||||||||||||||||||||||| |||||||| ||||| ||| | |||||||||
Sbjct: 637 agcttgcccttcatgaaaggcctctggtacatcggcattccctcgtcgctgattgccttg 578
Query: 729 aattggtcaggtttaacaacttcaccagggtctgatttgatgagaagctgcctgttgtcc 788
||| ||||| || |||||||||||||||| |||||| ||||| |||||||||||||||
Sbjct: 577 aatgaatcaggcttgacaacttcaccagggtttgatttaatgagcagctgcctgttgtcc 518
Query: 789 agatgtgtaagaacaaattggaacccacatagtgcttcggtcagagacaaggtgtgctca 848
||||| || | ||| | |||||||||||| || ||||| || ||||| | ||||||||||
Sbjct: 517 agatgggtcaaaacgagttggaacccacaaagagcttcagtgagagatatggtgtgctca 458
Query: 849 tagaagagatcttcaccctttcttttgaacttggagtggtccttctgctggaggacgaat 908
||||||||||| |||||||| | |||||||| | ||| ||||||||||||| ||| |||
Sbjct: 457 tagaagagatcatcacccttccgcttgaacttcgggtgttccttctgctggacgacaaat 398
Query: 909 acaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatcttc 968
||||||||||||||||| || |||||||| ||||||||||| ||||||||||||||||||
Sbjct: 397 acaatgtctccagtaacagtgtcaggcgcctcatcagcttccccagggaaggtgatcttc 338
Query: 969 tggctgtgttgcattcccttctcaacatgaacctcaagaaccttcttctcctgaacgacc 1028
||| |||||||||| |||||||||||||||||||| | ||| ||||||||||||| |||
Sbjct: 337 tggttgtgttgcatccccttctcaacatgaacctccaaaactttcttctcctgaagaacc 278
Query: 1029 ttctcacccttacaccctgggcagcggtccttctcgttgatgctctccccagtccccttg 1088
||||||||||| || ||||||||||| || || ||||| || ||||||||||| ||||||
Sbjct: 277 ttctcacccttgcagcctgggcagcgatctttgtcgttaatactctccccagtgcccttg 218
Query: 1089 cactcgttgcaaggctgctgcatctgctgtatcatggaaggccccagctgacgaatggtg 1148
|| || ||||| | ||||||| ||||||||||||||||||||||||||||||||| ||
Sbjct: 217 caatcattgcaggcatgctgcacctgctgtatcatggaaggccccagctgacgaatagtc 158
Query: 1149 actttcatacctgagccctggcacccagggcacctcattgaagcaccagacttcgagccc 1208
|| ||||| ||||| |||||||| || ||||||||||| |||||||||||||| ||||||
Sbjct: 157 accttcatgcctgaaccctggcaacctgggcacctcatggaagcaccagacttggagccc 98
Query: 1209 ttgcccttgcacttggagcagatgacattgcgcgaaagagagagcttctttgagattcca 1268
|||||||||||||||||||||| |||| | || ||||||||||||||||||||| | |||
Sbjct: 97 ttgcccttgcacttggagcagaggacactacgggaaagagagagcttctttgaggtacca 38
Query: 1269 ttgtaaagatcttccagagaaacttta 1295
|||||||||||||| |||||| |||||
Sbjct: 37 ttgtaaagatcttctagagaagcttta 11
>gb|BG367410.1|BG367410 HVSMEi0012C18f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0012C18f, mRNA sequence
Length = 693
Score = 638 bits (322), Expect = 0.0
Identities = 564/644 (87%), Gaps = 3/644 (0%)
Strand = Plus / Minus
Query: 501 cgcatctcttcctcgatgttgttcacatcatgcatagtcgtctcctcgcattcatctatc 560
|||||||||||||| |||||| ||||||||||| ||||||||||||||||| || | |
Sbjct: 648 cgcatctcttcctccatgttg---acatcatgcatcgtcgtctcctcgcattcgtcaagc 592
Query: 561 tccatgtctgtcagcttggatgaaggccttggtggaagtactgtctcgagagccttgcac 620
|||||||| ||||||||||||| |||| |||||||||| || | ||||||||||||||||
Sbjct: 591 tccatgtcagtcagcttggatgcaggctttggtggaagaacggcctcgagagccttgcac 532
Query: 621 tgctctggtgccagcgagtcggggaactccaccgtgaaatgaatgtacagcttccccttc 680
|| || |||||||| ||||||||||||||||| |||||||| ||||| ||||| ||||||
Sbjct: 531 tgatccggtgccagagagtcggggaactccactgtgaaatggatgtagagcttgcccttc 472
Query: 681 atgaaaggcctctggtaaatcggcatcccctcatcgtttattgccttgaattggtcaggt 740
||||||||||||||||| |||||||| ||||| ||| | |||||||||||| |||||
Sbjct: 471 atgaaaggcctctggtacatcggcattccctcgtcgctgattgccttgaatgaatcaggc 412
Query: 741 ttaacaacttcaccagggtctgatttgatgagaagctgcctgttgtccagatgtgtaaga 800
|| |||||||||||||||| |||||| ||||| |||||||||||||||||||| || | |
Sbjct: 411 ttgacaacttcaccagggtttgatttaatgagcagctgcctgttgtccagatgggtcaaa 352
Query: 801 acaaattggaacccacatagtgcttcggtcagagacaaggtgtgctcatagaagagatct 860
|| | |||||||||||| || ||||| || ||||| | |||||||||||||||||||||
Sbjct: 351 acgagttggaacccacaaagagcttcagtgagagatatggtgtgctcatagaagagatca 292
Query: 861 tcaccctttcttttgaacttggagtggtccttctgctggaggacgaatacaatgtctcca 920
|||||||||| |||||||| | ||| ||||||||||||| ||| |||||||||||||||
Sbjct: 291 tcaccctttcgcttgaacttcgggtgttccttctgctggacgacaaatacaatgtctcca 232
Query: 921 gtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatcttctggctgtgttgc 980
||||| || |||||||| ||||||||||| ||||||||||||||||||||| ||||||||
Sbjct: 231 gtaacagtgtcaggcgcctcatcagcttccccagggaaggtgatcttctggttgtgttgc 172
Query: 981 attcccttctcaacatgaacctcaagaaccttcttctcctgaacgaccttctcaccctta 1040
|| |||||||||||||||||||| | ||| |||||||| |||| ||||||||||||||
Sbjct: 171 atccccttctcaacatgaacctccaaaactttcttctcttgaagaaccttctcacccttg 112
Query: 1041 caccctgggcagcggtccttctcgttgatgctctccccagtccccttgcactcgttgcaa 1100
|| ||||||||||| || || ||||| || |||||||| || |||||||| || |||||
Sbjct: 111 cagcctgggcagcgatctttgtcgttaatactctccccggtgcccttgcaatcattgcag 52
Query: 1101 ggctgctgcatctgctgtatcatggaaggccccagctgacgaat 1144
| ||||||| |||||||||||||||||||||||||||||||||
Sbjct: 51 gcatgctgcacctgctgtatcatggaaggccccagctgacgaat 8
>gb|BQ459152.1|BQ459152 HA02C15r HA Hordeum vulgare subsp. vulgare cDNA clone HA02C15
5-PRIME, mRNA sequence
Length = 662
Score = 638 bits (322), Expect = 0.0
Identities = 561/640 (87%), Gaps = 3/640 (0%)
Strand = Plus / Minus
Query: 501 cgcatctcttcctcgatgttgttcacatcatgcatagtcgtctcctcgcattcatctatc 560
|||||||| ||||| |||||| ||||||||||| |||||||||||||||||||| | |
Sbjct: 647 cgcatctcctcctccatgttg---acatcatgcatcgtcgtctcctcgcattcatcaagc 591
Query: 561 tccatgtctgtcagcttggatgaaggccttggtggaagtactgtctcgagagccttgcac 620
|||||||| ||||||||||||| |||| |||||||||| || | ||||||||||||||||
Sbjct: 590 tccatgtcagtcagcttggatgcaggctttggtggaagaacggcctcgagagccttgcac 531
Query: 621 tgctctggtgccagcgagtcggggaactccaccgtgaaatgaatgtacagcttccccttc 680
|| || |||||||| ||||||||||||||||| |||||||| ||||| ||||| ||||||
Sbjct: 530 tgatccggtgccagagagtcggggaactccactgtgaaatggatgtagagcttgcccttc 471
Query: 681 atgaaaggcctctggtaaatcggcatcccctcatcgtttattgccttgaattggtcaggt 740
||||||||||||||||| |||||||| ||||| ||| | |||||||||||| |||||
Sbjct: 470 atgaaaggcctctggtacatcggcattccctcgtcgctgattgccttgaatgaatcaggc 411
Query: 741 ttaacaacttcaccagggtctgatttgatgagaagctgcctgttgtccagatgtgtaaga 800
|| |||||||||||||||| |||||| ||||| |||||||||||||||||||| || | |
Sbjct: 410 ttgacaacttcaccagggtttgatttaatgagcagctgcctgttgtccagatgggtcaaa 351
Query: 801 acaaattggaacccacatagtgcttcggtcagagacaaggtgtgctcatagaagagatct 860
|| | |||||||||||| || ||||| || ||||| | |||||||||||||||||||||
Sbjct: 350 acgagttggaacccacaaagagcttcagtgagagatatggtgtgctcatagaagagatca 291
Query: 861 tcaccctttcttttgaacttggagtggtccttctgctggaggacgaatacaatgtctcca 920
|||||||| | |||||||| | ||| ||||||||||||| ||| |||||||||||||||
Sbjct: 290 tcacccttccgcttgaacttcgggtgttccttctgctggacgacaaatacaatgtctcca 231
Query: 921 gtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatcttctggctgtgttgc 980
||||| || |||||||| ||||||||||| ||||||||||||||||||||| ||||||||
Sbjct: 230 gtaacagtgtcaggcgcctcatcagcttccccagggaaggtgatcttctggttgtgttgc 171
Query: 981 attcccttctcaacatgaacctcaagaaccttcttctcctgaacgaccttctcaccctta 1040
|| |||||||||||||||||||| | ||| ||||||||||||| ||||||||||||||
Sbjct: 170 atccccttctcaacatgaacctccaaaactttcttctcctgaagaaccttctcacccttg 111
Query: 1041 caccctgggcagcggtccttctcgttgatgctctccccagtccccttgcactcgttgcaa 1100
|| ||||||||||| || || ||||| || ||||||||||| |||||||| || |||||
Sbjct: 110 cagcctgggcagcgatctttgtcgttaatactctccccagtgcccttgcaatcattgcag 51
Query: 1101 ggctgctgcatctgctgtatcatggaaggccccagctgac 1140
| ||||||| |||||||||||||||||||||||||||||
Sbjct: 50 gcatgctgcacctgctgtatcatggaaggccccagctgac 11
>gb|BU988955.1|BU988955 HF19E06r HF Hordeum vulgare subsp. vulgare cDNA clone HF19E06
5-PRIME, mRNA sequence
Length = 636
Score = 638 bits (322), Expect = 0.0
Identities = 550/626 (87%)
Strand = Plus / Minus
Query: 670 gcttccccttcatgaaaggcctctggtaaatcggcatcccctcatcgtttattgccttga 729
|||| ||||||||||||||||||||||| |||||||| ||||| ||| | ||||||||||
Sbjct: 636 gcttgcccttcatgaaaggcctctggtacatcggcattccctcgtcgctgattgccttga 577
Query: 730 attggtcaggtttaacaacttcaccagggtctgatttgatgagaagctgcctgttgtcca 789
|| ||||| || |||||||||||||||| |||||| ||||| ||||||||||||||||
Sbjct: 576 atgaatcaggcttgacaacttcaccagggtttgatttaatgagcagctgcctgttgtcca 517
Query: 790 gatgtgtaagaacaaattggaacccacatagtgcttcggtcagagacaaggtgtgctcat 849
|||| || | ||| | |||||||||||| || ||||| || ||||| | |||||||||||
Sbjct: 516 gatgggtcaaaacgagttggaacccacaaagagcttcagtgagagatatggtgtgctcat 457
Query: 850 agaagagatcttcaccctttcttttgaacttggagtggtccttctgctggaggacgaata 909
|||||||||| |||||||| | |||||||| | ||| ||||||||||||| ||| ||||
Sbjct: 456 agaagagatcatcacccttccgcttgaacttcgggtgttccttctgctggacgacaaata 397
Query: 910 caatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatcttct 969
|||||||||||||||| || |||||||| ||||||||||| |||||||||||||||||||
Sbjct: 396 caatgtctccagtaacagtgtcaggcgcctcatcagcttccccagggaaggtgatcttct 337
Query: 970 ggctgtgttgcattcccttctcaacatgaacctcaagaaccttcttctcctgaacgacct 1029
|| |||||||||| |||||||||||||||||||| | ||| ||||||||||||| ||||
Sbjct: 336 ggttgtgttgcatccccttctcaacatgaacctccaaaactttcttctcctgaagaacct 277
Query: 1030 tctcacccttacaccctgggcagcggtccttctcgttgatgctctccccagtccccttgc 1089
|||||||||| || ||||||||||| || || ||||| || ||||||||||| |||||||
Sbjct: 276 tctcacccttgcagcctgggcagcgatctttgtcgttaatactctccccagtgcccttgc 217
Query: 1090 actcgttgcaaggctgctgcatctgctgtatcatggaaggccccagctgacgaatggtga 1149
| || ||||| | ||||||| ||||||||||||||||||||||||||||||||| || |
Sbjct: 216 aatcattgcaggcatgctgcacctgctgtatcatggaaggccccagctgacgaatagtca 157
Query: 1150 ctttcatacctgagccctggcacccagggcacctcattgaagcaccagacttcgagccct 1209
| ||||| ||||| |||||||| || ||||||||||| |||||||||||||| |||||||
Sbjct: 156 ccttcatgcctgaaccctggcaacctgggcacctcatggaagcaccagacttggagccct 97
Query: 1210 tgcccttgcacttggagcagatgacattgcgcgaaagagagagcttctttgagattccat 1269
||||||||||||||||||||| |||| | || ||||||||||||||||||||| | ||||
Sbjct: 96 tgcccttgcacttggagcagaggacactacgggaaagagagagcttctttgaggtaccat 37
Query: 1270 tgtaaagatcttccagagaaacttta 1295
||||||||||||| |||||| |||||
Sbjct: 36 tgtaaagatcttctagagaagcttta 11
>gb|CA014051.1|CA014051 HT10E01r HT Hordeum vulgare subsp. vulgare cDNA clone HT10E01
5-PRIME, mRNA sequence
Length = 647
Score = 634 bits (320), Expect = e-180
Identities = 549/624 (87%), Gaps = 6/624 (0%)
Strand = Plus / Minus
Query: 888 tccttctgctggaggacgaatacaatgtctccagtaacggtatcaggcgcttcatcagct 947
||||||||||||| ||| |||||||||||||||||||| || |||||||| |||||||||
Sbjct: 641 tccttctgctggacgacaaatacaatgtctccagtaacagtgtcaggcgcctcatcagct 582
Query: 948 tcaccagggaaggtgatcttctggctgtgttgcattcccttctcaacatgaacctcaaga 1007
|| ||||||||||||||||||||| |||||||||| |||||||||||||||||||| | |
Sbjct: 581 tccccagggaaggtgatcttctggttgtgttgcatccccttctcaacatgaacctccaaa 522
Query: 1008 accttcttctcctgaacgaccttctcacccttacaccctgggcagcggtccttctcgttg 1067
|| ||||||||||||| |||||||||||||| || ||||||||||| || || |||||
Sbjct: 521 actttcttctcctgaagaaccttctcacccttgcagcctgggcagcgatctttgtcgtta 462
Query: 1068 atgctctccccagtccccttgcactcgttgcaaggctgctgcatctgctgtatcatggaa 1127
|| ||||||||||| |||||||| || ||||| | ||||||| ||||||||||||||||
Sbjct: 461 atactctccccagtgcccttgcaatcattgcaggcatgctgcacctgctgtatcatggaa 402
Query: 1128 ggccccagctgacgaatggtgactttcatacctgagccctggcacccagggcacctcatt 1187
||||||||||||||||| || || ||||| ||||| |||||||| || |||||||||||
Sbjct: 401 ggccccagctgacgaatagtcaccttcatgcctgaaccctggcaacctgggcacctcatg 342
Query: 1188 gaagcaccagacttcgagcccttgcccttgcacttggagcagatgacattgcgcgaaaga 1247
|||||||||||||| |||||||||||||||||||||||||||| |||| | || ||||||
Sbjct: 341 gaagcaccagacttggagcccttgcccttgcacttggagcagaggacactacgggaaaga 282
Query: 1248 gagagcttctttgagattccattgtaaagatcttccagagaaactttaagtgagtggact 1307
||||||||||||||| | ||||||||||||||||| |||||| ||||||||| |||||
Sbjct: 281 gagagcttctttgaggtaccattgtaaagatcttctagagaagctttaagtggatggaca 222
Query: 1308 acatcttctcccctcctttgccttcttcccctgctgcttccaccacctcc---tccaaaa 1364
||||| |||||||||||||||||||| ||||||||||| |||||||| || |||||||
Sbjct: 221 acatcctctcccctcctttgccttctgcccctgctgctgccaccaccaccacctccaaaa 162
Query: 1365 gagggtccaaaaaatgatgagaaaatgtcaaatggatcaa---catgggatccaccacca 1421
||||| || |||||||||||||| |||||||||||||||| || ||| || |||
Sbjct: 161 gagggcccgaaaaatgatgagaatatgtcaaatggatcaactccaccacctcctcctcca 102
Query: 1422 cccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttctctgga 1481
|||||||||||||| || |||||||| ||||||| |||||| |||||||| ||||| ||
Sbjct: 101 cccattccttccttgagagcatcttcgccatacttatcatagatctcacgcttctcaggg 42
Query: 1482 tcactcaaaacctcataggcttgt 1505
||||||||||||||||||||||||
Sbjct: 41 tcactcaaaacctcataggcttgt 18
>gb|BU967531.1|BU967531 HB04J15r BC Hordeum vulgare subsp. vulgare cDNA clone HB04J15
5-PRIME, mRNA sequence
Length = 633
Score = 632 bits (319), Expect = e-180
Identities = 544/619 (87%)
Strand = Plus / Minus
Query: 669 agcttccccttcatgaaaggcctctggtaaatcggcatcccctcatcgtttattgccttg 728
||||| ||||||||||||||||||||||| |||||||| ||||| ||| | |||||||||
Sbjct: 629 agcttgcccttcatgaaaggcctctggtacatcggcattccctcgtcgctgattgccttg 570
Query: 729 aattggtcaggtttaacaacttcaccagggtctgatttgatgagaagctgcctgttgtcc 788
||| ||||| || |||||||||||||||| |||||| ||||| |||||||||||||||
Sbjct: 569 aatgaatcaggcttgacaacttcaccagggtttgatttaatgagcagctgcctgttgtcc 510
Query: 789 agatgtgtaagaacaaattggaacccacatagtgcttcggtcagagacaaggtgtgctca 848
||||| || | ||| | |||||||||||| || ||||| || ||||| | ||||||||||
Sbjct: 509 agatgggtcaaaacgagttggaacccacaaagagcttcagtgagagatatggtgtgctca 450
Query: 849 tagaagagatcttcaccctttcttttgaacttggagtggtccttctgctggaggacgaat 908
||||||||||| |||||||| | |||||||| | ||| ||||||||||||| ||| |||
Sbjct: 449 tagaagagatcatcacccttccgcttgaacttcgggtgttccttctgctggacgacaaat 390
Query: 909 acaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatcttc 968
||||||||||||||||| || |||||||| ||||||||||| ||||||||||||||||||
Sbjct: 389 acaatgtctccagtaacagtgtcaggcgcctcatcagcttccccagggaaggtgatcttc 330
Query: 969 tggctgtgttgcattcccttctcaacatgaacctcaagaaccttcttctcctgaacgacc 1028
||| |||||||||| |||||||||||||||||||| | ||| ||||||||||||| |||
Sbjct: 329 tggttgtgttgcatccccttctcaacatgaacctccaaaactttcttctcctgaagaacc 270
Query: 1029 ttctcacccttacaccctgggcagcggtccttctcgttgatgctctccccagtccccttg 1088
||||||||||| || ||||||||||| || || ||||| || ||||||||||| ||||||
Sbjct: 269 ttctcacccttgcagcctgggcagcgatctttgtcgttaatactctccccagtgcccttg 210
Query: 1089 cactcgttgcaaggctgctgcatctgctgtatcatggaaggccccagctgacgaatggtg 1148
|| || ||||| | ||||||| ||||||||||||||||||||||||||||||||| ||
Sbjct: 209 caatcattgcaggcatgctgcacctgctgtatcatggaaggccccagctgacgaatagtc 150
Query: 1149 actttcatacctgagccctggcacccagggcacctcattgaagcaccagacttcgagccc 1208
|| ||||| ||||| |||||||| || ||||||||||| |||||||||||||| ||||||
Sbjct: 149 accttcatgcctgaaccctggcaacctgggcacctcatggaagcaccagacttggagccc 90
Query: 1209 ttgcccttgcacttggagcagatgacattgcgcgaaagagagagcttctttgagattcca 1268
|||||||||||||||||||||| |||| | || ||||||||||||||||||||| | |||
Sbjct: 89 ttgcccttgcacttggagcagaggacactacgggaaagagagagcttctttgaggtacca 30
Query: 1269 ttgtaaagatcttccagag 1287
|||||||||||||| ||||
Sbjct: 29 ttgtaaagatcttctagag 11
>gb|BU987246.1|BU987246 HF14D12r HF Hordeum vulgare subsp. vulgare cDNA clone HF14D12
5-PRIME, mRNA sequence
Length = 644
Score = 632 bits (319), Expect = e-180
Identities = 544/619 (87%)
Strand = Plus / Minus
Query: 720 attgccttgaattggtcaggtttaacaacttcaccagggtctgatttgatgagaagctgc 779
|||||||||||| ||||| || |||||||||||||||| |||||| ||||| ||||||
Sbjct: 628 attgccttgaatgaatcaggcttgacaacttcaccagggtttgatttaatgagcagctgc 569
Query: 780 ctgttgtccagatgtgtaagaacaaattggaacccacatagtgcttcggtcagagacaag 839
|||||||||||||| || | ||| | |||||||||||| || ||||| || ||||| | |
Sbjct: 568 ctgttgtccagatgggtcaaaacgagttggaacccacaaagagcttcagtgagagatatg 509
Query: 840 gtgtgctcatagaagagatcttcaccctttcttttgaacttggagtggtccttctgctgg 899
|||||||||||||||||||| |||||||| | |||||||| | ||| ||||||||||||
Sbjct: 508 gtgtgctcatagaagagatcatcacccttccgcttgaacttcgggtgttccttctgctgg 449
Query: 900 aggacgaatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaag 959
| ||| |||||||||||||||||||| || |||||||| ||||||||||| |||||||||
Sbjct: 448 acgacaaatacaatgtctccagtaacagtgtcaggcgcctcatcagcttccccagggaag 389
Query: 960 gtgatcttctggctgtgttgcattcccttctcaacatgaacctcaagaaccttcttctcc 1019
|||||||||||| |||||||||| |||||||||||||||||||| | ||| |||||||||
Sbjct: 388 gtgatcttctggttgtgttgcatccccttctcaacatgaacctccaaaactttcttctcc 329
Query: 1020 tgaacgaccttctcacccttacaccctgggcagcggtccttctcgttgatgctctcccca 1079
|||| |||||||||||||| || ||||||||||| || || ||||| || |||||||||
Sbjct: 328 tgaagaaccttctcacccttgcagcctgggcagcgatctttgtcgttaatactctcccca 269
Query: 1080 gtccccttgcactcgttgcaaggctgctgcatctgctgtatcatggaaggccccagctga 1139
|| |||||||| || ||||| | ||||||| ||||||||||||||||||||||||||||
Sbjct: 268 gtgcccttgcaatcattgcaggcatgctgcacctgctgtatcatggaaggccccagctga 209
Query: 1140 cgaatggtgactttcatacctgagccctggcacccagggcacctcattgaagcaccagac 1199
||||| || || ||||| ||||| |||||||| || ||||||||||| ||||||||||||
Sbjct: 208 cgaatagtcaccttcatgcctgaaccctggcaacctgggcacctcatggaagcaccagac 149
Query: 1200 ttcgagcccttgcccttgcacttggagcagatgacattgcgcgaaagagagagcttcttt 1259
|| |||||||||||||||||||||||||||| |||| | || ||||||||||||||||||
Sbjct: 148 ttggagcccttgcccttgcacttggagcagaggacactacgggaaagagagagcttcttt 89
Query: 1260 gagattccattgtaaagatcttccagagaaactttaagtgagtggactacatcttctccc 1319
||| | ||||||||||||||||| |||||| ||||||||| ||||| ||||| ||||||
Sbjct: 88 gaggtaccattgtaaagatcttctagagaagctttaagtggatggacaacatcctctccc 29
Query: 1320 ctcctttgccttcttcccc 1338
|||||||||||||| ||||
Sbjct: 28 ctcctttgccttctgcccc 10
>gb|BJ447003.1|BJ447003 BJ447003 K. Sato unpublished cDNA library, cv. Akashinriki vegetative
stage leaves Hordeum vulgare subsp. vulgare cDNA clone
baak15k19 5', mRNA sequence
Length = 613
Score = 599 bits (302), Expect = e-169
Identities = 534/612 (87%)
Strand = Plus / Minus
Query: 663 atgtacagcttccccttcatgaaaggcctctggtaaatcggcatcccctcatcgtttatt 722
||||| ||||| ||||||||||||||||||||||| |||||||| ||||| ||| | |||
Sbjct: 612 atgtagagcttgcccttcatgaaaggcctctggtacatcggcattccctcgtcgctgatt 553
Query: 723 gccttgaattggtcaggtttaacaacttcaccagggtctgatttgatgagaagctgcctg 782
||||||||| ||||| || |||||||||||||||| |||||| ||||| |||||||||
Sbjct: 552 gccttgaatgaatcaggcttgacaacttcaccagggtttgatttaatgagcagctgcctg 493
Query: 783 ttgtccagatgtgtaagaacaaattggaacccacatagtgcttcggtcagagacaaggtg 842
||||||||||| || | ||| | |||||||||||| || ||||| || ||||| | ||||
Sbjct: 492 ttgtccagatgggtcaaaacgagttggaacccacaaagagcttcagtgagagatatggtg 433
Query: 843 tgctcatagaagagatcttcaccctttcttttgaacttggagtggtccttctgctggagg 902
||||||||||||||||| |||||||| | |||||||| | ||| ||||||||||||| |
Sbjct: 432 tgctcatagaagagatcatcacccttccgcttgaacttcgggtgttccttctgctggacg 373
Query: 903 acgaatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtg 962
|| |||||||||||||||||||| || |||||||| ||||||||||| ||||||||||||
Sbjct: 372 acaaatacaatgtctccagtaacagtgtcaggcgcctcatcagcttccccagggaaggtg 313
Query: 963 atcttctggctgtgttgcattcccttctcaacatgaacctcaagaaccttcttctcctga 1022
||||||||| |||||||||| |||||||||||||||||||| | ||| ||||||||||||
Sbjct: 312 atcttctggttgtgttgcatccccttctcaacatgaacctccaaaactttcttctcctga 253
Query: 1023 acgaccttctcacccttacaccctgggcagcggtccttctcgttgatgctctccccagtc 1082
| |||||||||||||| || ||||||||||| || || ||||| || |||||||| ||
Sbjct: 252 agcaccttctcacccttgcagcctgggcagcgatctttgtcgttaatactctccccggtg 193
Query: 1083 cccttgcactcgttgcaaggctgctgcatctgctgtatcatggaaggccccagctgacga 1142
|||||||| || ||||| | ||||||| |||||||||||||||||||||||||||||||
Sbjct: 192 cccttgcaatcattgcaggcatgctgcacctgctgtatcatggaaggccccagctgacga 133
Query: 1143 atggtgactttcatacctgagccctggcacccagggcacctcattgaagcaccagacttc 1202
|| || || ||||| ||||| |||||||| || ||||||||||| ||||||||||||||
Sbjct: 132 atagtcaccttcatgcctgaaccctggcaacctgggcacctcatggaagcaccagacttg 73
Query: 1203 gagcccttgcccttgcacttggagcagatgacattgcgcgaaagagagagcttctttgag 1262
|||||||||||||||||||||||||||| |||| | || |||||||||||||| |||||
Sbjct: 72 gagcccttgcccttgcacttggagcagaggacactacgggaaagagagagcttnnttgag 13
Query: 1263 attccattgtaa 1274
| |||||||||
Sbjct: 12 gtaccattgtaa 1
>gb|BE420930.1|BE420930 HWM004.A07 ITEC HWM Barley Leaf Library Hordeum vulgare subsp.
vulgare cDNA clone HWM004.A07, mRNA sequence
Length = 1037
Score = 597 bits (301), Expect = e-169
Identities = 525/599 (87%), Gaps = 3/599 (0%)
Strand = Plus / Minus
Query: 501 cgcatctcttcctcgatgttgttcacatcatgcatagtcgtctcctcgcattcatctatc 560
|||||||||||||| |||||| ||||||||||| |||||||||||||||||||| | |
Sbjct: 725 cgcatctcttcctccatgttg---acatcatgcatcgtcgtctcctcgcattcatcaagc 669
Query: 561 tccatgtctgtcagcttggatgaaggccttggtggaagtactgtctcgagagccttgcac 620
|||||||| ||||||||||||| |||| |||||||||| || | ||||||||||||||||
Sbjct: 668 tccatgtcagtcagcttggatgcaggctttggtggaagaacggcctcgagagccttgcac 609
Query: 621 tgctctggtgccagcgagtcggggaactccaccgtgaaatgaatgtacagcttccccttc 680
|| || |||||||| ||||||||||||||||| |||||||| ||||| ||||| ||||||
Sbjct: 608 tgatccggtgccagagagtcggggaactccactgtgaaatggatgtagagcttgcccttc 549
Query: 681 atgaaaggcctctggtaaatcggcatcccctcatcgtttattgccttgaattggtcaggt 740
||||||||||||||||| |||||||| ||||| ||| | |||||||||||| |||||
Sbjct: 548 atgaaaggcctctggtacatcggcattccctcgtcgctgattgccttgaatgaatcaggc 489
Query: 741 ttaacaacttcaccagggtctgatttgatgagaagctgcctgttgtccagatgtgtaaga 800
|| |||||||||||||||| |||||| ||||| |||||||||||||||||||| || | |
Sbjct: 488 ttgacaacttcaccagggtttgatttaatgagcagctgcctgttgtccagatgggtcaaa 429
Query: 801 acaaattggaacccacatagtgcttcggtcagagacaaggtgtgctcatagaagagatct 860
|| | |||||||||||| || ||||| || ||||| | |||||||||||||||||||||
Sbjct: 428 acgagttggaacccacaaagagcttcagtgagagatatggtgtgctcatagaagagatca 369
Query: 861 tcaccctttcttttgaacttggagtggtccttctgctggaggacgaatacaatgtctcca 920
|||||||| | |||||||| | ||| ||||||||||||| ||| |||||||||||||||
Sbjct: 368 tcacccttccgcttgaacttcgggtgttccttctgctggacgacaaatacaatgtctcca 309
Query: 921 gtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatcttctggctgtgttgc 980
||||| || |||||||| ||||||||||| ||||||||||||||||||||| ||||||||
Sbjct: 308 gtaacagtgtcaggcgcctcatcagcttccccagggaaggtgatcttctggttgtgttgc 249
Query: 981 attcccttctcaacatgaacctcaagaaccttcttctcctgaacgaccttctcaccctta 1040
|| |||||||||||||||||||| | ||| ||||||||||||| ||||||||||||||
Sbjct: 248 atccccttctcaacatgaacctccaaaactttcttctcctgaagaaccttctcacccttg 189
Query: 1041 caccctgggcagcggtccttctcgttgatgctctccccagtccccttgcactcgttgca 1099
|| ||||||||||| || || ||||| || ||||||||||| |||||||| || |||||
Sbjct: 188 cagcctgggcagcgatctttgtcgttaatactctccccagtgcccttgcaatcattgca 130
>gb|BU978653.1|BU978653 HA13N23r HA Hordeum vulgare subsp. vulgare cDNA clone HA13N23
5-PRIME, mRNA sequence
Length = 577
Score = 591 bits (298), Expect = e-167
Identities = 499/566 (88%)
Strand = Plus / Minus
Query: 768 atgagaagctgcctgttgtccagatgtgtaagaacaaattggaacccacatagtgcttcg 827
||||| |||||||||||||||||||| || | ||| | |||||||||||| || |||||
Sbjct: 576 atgagcagctgcctgttgtccagatgggtcaaaacgagttggaacccacaaagagcttca 517
Query: 828 gtcagagacaaggtgtgctcatagaagagatcttcaccctttcttttgaacttggagtgg 887
|| ||||| | ||||||||||||||||||||| |||||||| | |||||||| | |||
Sbjct: 516 gtgagagatatggtgtgctcatagaagagatcatcacccttccgcttgaacttcgggtgt 457
Query: 888 tccttctgctggaggacgaatacaatgtctccagtaacggtatcaggcgcttcatcagct 947
||||||||||||| ||| |||||||||||||||||||| || |||||||| |||||||||
Sbjct: 456 tccttctgctggacgacaaatacaatgtctccagtaacagtgtcaggcgcctcatcagct 397
Query: 948 tcaccagggaaggtgatcttctggctgtgttgcattcccttctcaacatgaacctcaaga 1007
|| ||||||||||||||||||||| |||||||||| |||||||||||||||||||| | |
Sbjct: 396 tccccagggaaggtgatcttctggttgtgttgcatccccttctcaacatgaacctccaaa 337
Query: 1008 accttcttctcctgaacgaccttctcacccttacaccctgggcagcggtccttctcgttg 1067
|| ||||||||||||| |||||||||||||| || ||||||||||| || || |||||
Sbjct: 336 actttcttctcctgaagaaccttctcacccttgcagcctgggcagcgatctttgtcgtta 277
Query: 1068 atgctctccccagtccccttgcactcgttgcaaggctgctgcatctgctgtatcatggaa 1127
|| ||||||||||| |||||||| || ||||| | ||||||| ||||||||||||||||
Sbjct: 276 atactctccccagtgcccttgcaatcattgcaggcatgctgcacctgctgtatcatggaa 217
Query: 1128 ggccccagctgacgaatggtgactttcatacctgagccctggcacccagggcacctcatt 1187
||||||||||||||||| || || ||||| ||||| |||||||| || |||||||||||
Sbjct: 216 ggccccagctgacgaatagtcaccttcatgcctgaaccctggcaacctgggcacctcatg 157
Query: 1188 gaagcaccagacttcgagcccttgcccttgcacttggagcagatgacattgcgcgaaaga 1247
|||||||||||||| |||||||||||||||||||||||||||| |||| | || ||||||
Sbjct: 156 gaagcaccagacttggagcccttgcccttgcacttggagcagaggacactacgggaaaga 97
Query: 1248 gagagcttctttgagattccattgtaaagatcttccagagaaactttaagtgagtggact 1307
||||||||||||||| | ||||||||||||||||| |||||| ||||||||| |||||
Sbjct: 96 gagagcttctttgaggtaccattgtaaagatcttctagagaagctttaagtggatggaca 37
Query: 1308 acatcttctcccctcctttgccttct 1333
||||| ||||||||||||||||||||
Sbjct: 36 acatcctctcccctcctttgccttct 11
>gb|BU967401.1|BU967401 HB04D03r BC Hordeum vulgare subsp. vulgare cDNA clone HB04D03
5-PRIME, mRNA sequence
Length = 601
Score = 589 bits (297), Expect = e-166
Identities = 516/589 (87%)
Strand = Plus / Minus
Query: 699 atcggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcaccaggg 758
|||||||| ||||| ||| | |||||||||||| ||||| || |||||||||||||||
Sbjct: 599 atcggcattccctcgtcgctgattgccttgaatgaatcaggcttgacaacttcaccaggg 540
Query: 759 tctgatttgatgagaagctgcctgttgtccagatgtgtaagaacaaattggaacccacat 818
| |||||| ||||| |||||||||||||||||||| || | ||| | ||||||||||||
Sbjct: 539 tttgatttaatgagcagctgcctgttgtccagatgggtcaaaacgagttggaacccacaa 480
Query: 819 agtgcttcggtcagagacaaggtgtgctcatagaagagatcttcaccctttcttttgaac 878
|| ||||| || ||||| | ||||||||||||||||||||| |||||||| | ||||||
Sbjct: 479 agagcttcagtgagagatatggtgtgctcatagaagagatcatcacccttccgcttgaac 420
Query: 879 ttggagtggtccttctgctggaggacgaatacaatgtctccagtaacggtatcaggcgct 938
|| | ||| ||||||||||||| ||| |||||||||||||||||||| || ||||||||
Sbjct: 419 ttcgggtgttccttctgctggacgacaaatacaatgtctccagtaacagtgtcaggcgcc 360
Query: 939 tcatcagcttcaccagggaaggtgatcttctggctgtgttgcattcccttctcaacatga 998
||||||||||| ||||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct: 359 tcatcagcttccccagggaaggtgatcttctggttgtgttgcatccccttctcaacatga 300
Query: 999 acctcaagaaccttcttctcctgaacgaccttctcacccttacaccctgggcagcggtcc 1058
||||| | ||| ||||||||||||| |||||||||||||| || ||||||||||| ||
Sbjct: 299 acctccaaaactttcttctcctgaagaaccttctcacccttgcagcctgggcagcgatct 240
Query: 1059 ttctcgttgatgctctccccagtccccttgcactcgttgcaaggctgctgcatctgctgt 1118
|| ||||| || ||||||||||| |||||||| || ||||| | ||||||| |||||||
Sbjct: 239 ttgtcgttaatactctccccagtgcccttgcaatcattgcaggcatgctgcacctgctgt 180
Query: 1119 atcatggaaggccccagctgacgaatggtgactttcatacctgagccctggcacccaggg 1178
|||||||||||||||||||||||||| || || ||||| ||||| |||||||| || |||
Sbjct: 179 atcatggaaggccccagctgacgaatagtcaccttcatgcctgaaccctggcaacctggg 120
Query: 1179 cacctcattgaagcaccagacttcgagcccttgcccttgcacttggagcagatgacattg 1238
|||||||| |||||||||||||| |||||||||||||||||||||||||||| |||| |
Sbjct: 119 cacctcatggaagcaccagacttggagcccttgcccttgcacttggagcagaggacacta 60
Query: 1239 cgcgaaagagagagcttctttgagattccattgtaaagatcttccagag 1287
|| ||||||||||||||||||||| | ||||||||||||||||| ||||
Sbjct: 59 cgggaaagagagagcttctttgaggtaccattgtaaagatcttctagag 11
>gb|AL507036.1|AL507036 AL507036 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY04P20T 5',
mRNA sequence
Length = 626
Score = 555 bits (280), Expect = e-156
Identities = 456/514 (88%), Gaps = 6/514 (1%)
Strand = Plus / Minus
Query: 1165 cctggcacccagggcacctcattgaagcaccagacttcgagcccttgcccttgcacttgg 1224
||||||| || ||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 626 cctggcaacctgggcacctcatggaagcaccagacttgnagcccttgcccttgcacttgg 567
Query: 1225 agcagatgacattgcgcgaaagagagagcttctttgagattccattgtaaagatcttcca 1284
|||||| |||| | || |||||||||||||||||||| | ||||||||||||||||| |
Sbjct: 566 agcagaggacactacggnaaagagagagcttctttgaggtaccattgtaaagatcttcta 507
Query: 1285 gagaaactttaagtgagtggactacatcttctcccctcctttgccttcttcccctgctgc 1344
||||| ||||||||| ||||| ||||| |||||||||||||||||||| ||||||||||
Sbjct: 506 gagaagctttaagtggatggacaacatcctctcccctcctttgccttctgcccctgctgc 447
Query: 1345 ttccaccacctcc---tccaaaagagggtccaaaaaatgatgagaaaatgtcaaatggat 1401
| |||||||| || |||||||||||| || |||||||||||||| |||||||||||||
Sbjct: 446 tgccaccaccaccacctccaaaagagggcccgaaaaatgatgagaatatgtcaaatggat 387
Query: 1402 caa---catgggatccaccaccacccattccttccttaagggcatcttcaccatactgat 1458
||| || ||| || ||||||||||||||||| || |||||||| ||||||| ||
Sbjct: 386 caactccaccacctcctcctccacccattccttccttgagagcatcttcgccatacttat 327
Query: 1459 cataaatctcacgtttctctggatcactcaaaacctcataggcttgtgcgagctccttga 1518
|||| |||||||| ||||| || |||||||||||||||||||||||||| ||||||||||
Sbjct: 326 catagatctcacgcttctcagggtcactcaaaacctcataggcttgtgccagctccttga 267
Query: 1519 acttctcggggtcaccgcccttgtcggggtggttcttgatagcggccttgcggtaggcct 1578
|||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 266 acttctcggggtcaccgcccttgtcggggtggttcttgatggcagccttgcggtaggcct 207
Query: 1579 tcttgaggtcgtcctgggacgccgacttgggcaccccgaggatctcatagtacttggtgt 1638
|||||||||||||||||| || ||||||||||||||||| ||| |||||||||||||
Sbjct: 206 tcttgaggtcgtcctgggcggcgtccttgggcaccccgaggacctcgtagtacttggtgt 147
Query: 1639 tgtcgctcttcttcggcgcgcgcccgaacatctt 1672
||||||||||||| || ||||| |||||||||||
Sbjct: 146 tgtcgctcttcttgggggcgcggccgaacatctt 113
>gb|AL507613.1|AL507613 AL507613 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY06F15V 5',
mRNA sequence
Length = 637
Score = 535 bits (270), Expect = e-150
Identities = 456/516 (88%), Gaps = 7/516 (1%)
Strand = Plus / Minus
Query: 1164 ccctggcacccagggcacctcattgaagcaccagacttcgagcccttgcccttgca-ctt 1222
|||||||| || |||||| |||| |||||||||||||| ||||||||||||||||| ||
Sbjct: 632 ccctggcaacctgggcacttcatggaagcaccagacttggagcccttgcccttgcaactn 573
Query: 1223 ggagcagatgacattgcgcgaaagagagagcttctttgagattccattgtaaagatcttc 1282
|||||| | |||| | || ||||||||||||||||||||| | |||||||||||||||||
Sbjct: 572 ggagcanaggacactacgggaaagagagagcttctttgaggtaccattgtaaagatcttc 513
Query: 1283 cagagaaactttaagtgagtggactacatcttctcccctcctttgccttcttcccctgct 1342
|||||| ||||||||| ||||| ||||| |||||||||||||||||||| ||||||||
Sbjct: 512 tagagaagctttaagtggatggacaacatcctctcccctcctttgccttctgcccctgct 453
Query: 1343 gcttccaccacctcc---tccaaaagagggtccaaaaaatgatgagaaaatgtcaaatgg 1399
||| |||||||| || |||||||||||| || |||||||||||||| |||||||||||
Sbjct: 452 gctgccaccaccaccacctccaaaagagggcccgaaaaatgatgagaatatgtcaaatgg 393
Query: 1400 atcaa---catgggatccaccaccacccattccttccttaagggcatcttcaccatactg 1456
||||| || ||| || ||||||||||||||||| || |||||||| |||||||
Sbjct: 392 atcaactccaccacctcctcctccacccattccttccttgagagcatcttcgccatactt 333
Query: 1457 atcataaatctcacgtttctctggatcactcaaaacctcataggcttgtgcgagctcctt 1516
|||||| |||||||| ||||| || |||||||||||||||||||||||||| ||||||||
Sbjct: 332 atcatagatctcacgcttctcagggtcactcaaaacctcataggcttgtgccagctcctt 273
Query: 1517 gaacttctcggggtcaccgcccttgtcggggtggttcttgatagcggccttgcggtaggc 1576
|||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 272 gaacttctcggggtcaccgcccttgtcggggtggttcttgatggcagccttgcggtaggc 213
Query: 1577 cttcttgaggtcgtcctgggacgccgacttgggcaccccgaggatctcatagtacttggt 1636
|||||||||||||||||||| || ||||||||||||||||| ||| |||||||||||
Sbjct: 212 cttcttgaggtcgtcctgggcggcgtccttgggcaccccgaggacctcgtagtacttggt 153
Query: 1637 gttgtcgctcttcttcggcgcgcgcccgaacatctt 1672
||||||||||||||| || ||||| |||||||||||
Sbjct: 152 gttgtcgctcttcttgggggcgcggccgaacatctt 117
>gb|BM369466.2|BM369466 EBem07_SQ003_K18_R embryo, 28 DPA, no treatment, cv Optic, EBem07
Hordeum vulgare subsp. vulgare cDNA clone
EBem07_SQ003_K18 5', mRNA sequence
Length = 539
Score = 517 bits (261), Expect = e-145
Identities = 455/519 (87%), Gaps = 3/519 (0%)
Strand = Plus / Minus
Query: 501 cgcatctcttcctcgatgttgttcacatcatgcatagtcgtctcctcgcattcatctatc 560
|||||||| ||||| |||||| ||||||||||| ||||||||||||||||| || | |
Sbjct: 516 cgcatctcctcctccatgttg---acatcatgcatcgtcgtctcctcgcattcgtcaagc 460
Query: 561 tccatgtctgtcagcttggatgaaggccttggtggaagtactgtctcgagagccttgcac 620
|||||||| ||||||||||||| |||| |||||||||| || | ||||||||||||||||
Sbjct: 459 tccatgtcagtcagcttggatgcaggctttggtggaagaacggcctcgagagccttgcac 400
Query: 621 tgctctggtgccagcgagtcggggaactccaccgtgaaatgaatgtacagcttccccttc 680
|| || |||||||| ||||||||||||||||| |||||||| ||||| ||||| ||||||
Sbjct: 399 tgatccggtgccagagagtcggggaactccactgtgaaatggatgtagagcttgcccttc 340
Query: 681 atgaaaggcctctggtaaatcggcatcccctcatcgtttattgccttgaattggtcaggt 740
||||||||||||||||| |||||||| ||||| ||| | |||||||||||| |||||
Sbjct: 339 atgaaaggcctctggtacatcggcattccctcgtcgctgattgccttgaatgaatcaggc 280
Query: 741 ttaacaacttcaccagggtctgatttgatgagaagctgcctgttgtccagatgtgtaaga 800
|| |||||||||||||||| |||||| ||||| |||||||||||||||||||| || | |
Sbjct: 279 ttgacaacttcaccagggtttgatttaatgagcagctgcctgttgtccagatgggtcaaa 220
Query: 801 acaaattggaacccacatagtgcttcggtcagagacaaggtgtgctcatagaagagatct 860
|| | |||||||||||| || ||||| || ||||| | |||||||||||||||||||||
Sbjct: 219 acgagttggaacccacaaagagcttcagtgagagatatggtgtgctcatagaagagatca 160
Query: 861 tcaccctttcttttgaacttggagtggtccttctgctggaggacgaatacaatgtctcca 920
|||||||| | |||||||| | ||| ||||||||||||| ||| |||||||||||||||
Sbjct: 159 tcacccttccgcttgaacttcgggtgttccttctgctggacgacaaatacaatgtctcca 100
Query: 921 gtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatcttctggctgtgttgc 980
||||| || |||||||| ||||||||||| ||||||||||||||||||||| ||||||||
Sbjct: 99 gtaacagtgtcaggcgcctcatcagcttccccagggaaggtgatcttctggttgtgttgc 40
Query: 981 attcccttctcaacatgaacctcaagaaccttcttctcc 1019
|| |||||||||||||||||||| | ||| |||||||||
Sbjct: 39 atccccttctcaacatgaacctccaaaactttcttctcc 1
>gb|BI948387.1|BI948387 HVSMEl0009F14f Hordeum vulgare spike EST library HVcDNA0012 (Fusarium
infected) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEl0009F14f, mRNA sequence
Length = 548
Score = 500 bits (252), Expect = e-140
Identities = 449/515 (87%)
Strand = Plus / Minus
Query: 630 gccagcgagtcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggc 689
||||| ||||||||||||||||| |||||||| ||||| ||||| || ||||||||||||
Sbjct: 548 gccagagagtcggggaactccactgtgaaatggatgtagagcttgccnttcatgaaaggc 489
Query: 690 ctctggtaaatcggcatcccctcatcgtttattgccttgaattggtcaggtttaacaact 749
||||||| |||||||| ||||| ||| | |||||||||||| ||||| || ||||||
Sbjct: 488 gtctggtacatcggcattccctcgtcgctgattgccttgaatgaatcaggcttgacaact 429
Query: 750 tcaccagggtctgatttgatgagaagctgcctgttgtccagatgtgtaagaacaaattgg 809
|||||||||| |||||| ||||| |||||||||||||||||||| || | ||| | ||||
Sbjct: 428 tcaccagggtttgatttaatgagcagctgcctgttgtccagatgggtcaaaacgagttgg 369
Query: 810 aacccacatagtgcttcggtcagagacaaggtgtgctcatagaagagatcttcacccttt 869
|||||||| || ||||| || ||||| | ||||||||||||||||||||| |||||||||
Sbjct: 368 aacccacaaagagcttcagtgagagatatggtgtgctcatagaagagatcatcacccttt 309
Query: 870 cttttgaacttggagtggtccttctgctggaggacgaatacaatgtctccagtaacggta 929
| |||||||| | ||| ||||||||||||| ||| |||||||||||||||||||| ||
Sbjct: 308 cgcttgaacttcgggtgttccttctgctggacgacaaatacaatgtctccagtaacagtg 249
Query: 930 tcaggcgcttcatcagcttcaccagggaaggtgatcttctggctgtgttgcattcccttc 989
|||||||| ||||||||||| ||||||||||||||||||||| |||||||||| ||||||
Sbjct: 248 tcaggcgcctcatcagcttccccagggaaggtgatcttctggttgtgttgcatccccttc 189
Query: 990 tcaacatgaacctcaagaaccttcttctcctgaacgaccttctcacccttacaccctggg 1049
|||||||||||||| | ||| ||||||||||||| |||||||||||||| || ||||||
Sbjct: 188 tcaacatgaacctccaaaactttcttctcctgaagaaccttctcacccttgcagcctggg 129
Query: 1050 cagcggtccttctcgttgatgctctccccagtccccttgcactcgttgcaaggctgctgc 1109
||||| || || ||||| || |||||||| || |||||||| || ||||| | ||||||
Sbjct: 128 cagcgatctttgtcgttaatactctccccggtgcccttgcaatcattgcaggcatgctgc 69
Query: 1110 atctgctgtatcatggaaggccccagctgacgaat 1144
| |||||||||||||||||||||||||||| ||||
Sbjct: 68 acctgctgtatcatggaaggccccagctgaagaat 34
>gb|CB882786.1|CB882786 HL02N12w HL Hordeum vulgare subsp. vulgare cDNA clone HL02N12
3-PRIME, mRNA sequence
Length = 590
Score = 480 bits (242), Expect = e-134
Identities = 409/462 (88%), Gaps = 7/462 (1%)
Strand = Plus / Minus
Query: 1218 cacttggagcagatgacattgcgcgaaagagagagcttctttgagattccattgtaaaga 1277
||||||||||||| |||| | || ||||||||||||||||||||| | ||||||||||||
Sbjct: 590 cacttggagcagaggacactacgggaaagagagagcttctttgaggtaccattgtaaaga 531
Query: 1278 tcttccagagaaactttaagtgagtggactacatcttctcccctcctttgccttcttccc 1337
||||| |||||| ||||||||| ||||| ||||| |||||||||||||||||||| |||
Sbjct: 530 tcttctagagaagctttaagtggatggacaacatcctctcccctcctttgccttctgccc 471
Query: 1338 ctgctgcttccaccacctcc---tccaaaagagggtccaaaaaatgatgagaaaatgtca 1394
|||||||| |||||||| || |||||||||||| || |||||||||||||| ||||||
Sbjct: 470 ctgctgctgccaccaccaccacctccaaaagagggcccgaaaaatgatgagaatatgtca 411
Query: 1395 aatggatcaa---catgggatccaccaccacccattccttccttaagggcatcttcacca 1451
|||||||||| || ||| || ||||||||||||||||| || |||||||| |||
Sbjct: 410 aatggatcaactccaccacctcctcctccacccattccttccttgagagcatcttcgcca 351
Query: 1452 tactgatcataaatctcacgtttctctggatcactcaaaacctcataggcttgtgcgagc 1511
|||| |||||| |||||||| ||||| || |||||||||||||||||||||||||| |||
Sbjct: 350 tacttatcatagatctcacgcttctcagggtcactcaaaacctcataggcttgtgccagc 291
Query: 1512 tccttgaacttctc-ggggtcaccgcccttgtcggggtggttcttgatagcggccttgcg 1570
|||||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 290 tccttgaacttctcnggggtcaccgcccttgtcggggtggttcttgatggcagccttgcg 231
Query: 1571 gtaggccttcttgaggtcgtcctgggacgccgacttgggcaccccgaggatctcatagta 1630
|||||||||||||||||||||||||| || ||||||||||||||||| ||| |||||
Sbjct: 230 gtaggccttcttgaggtcgtcctgggcggcgtccttgggcaccccgaggacctcgtagta 171
Query: 1631 cttggtgttgtcgctcttcttcggcgcgcgcccgaacatctt 1672
||||||||||||||||||||| || ||||| |||||||||||
Sbjct: 170 cttggtgttgtcgctcttcttgggggcgcggccgaacatctt 129
>gb|BE196549.2|BE196549 HVSMEh0092J17f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0092J17f, mRNA sequence
Length = 914
Score = 470 bits (237), Expect = e-131
Identities = 490/571 (85%), Gaps = 15/571 (2%)
Strand = Plus / Minus
Query: 408 gcttactgttgcgcgcactgcactctctgggctccgcc---cggcatct---cgtcgtcc 461
|||||||||||||||||||||||||| ||||| ||||| |||||||| |||||||
Sbjct: 565 gcttactgttgcgcgcactgcactctatgggccccgcctcccggcatctngtcgtcgtct 506
Query: 462 tcctcgtacgcctcctgggcagcg---tgagcttgcttcctgcgcatctcttcctcgatg 518
|| ||||||||||| || ||||| || |||| ||| |||||||| ||||| |||
Sbjct: 505 tcgtcgtacgcctcttgagcagcagcatgggctt---tccgacgcatctcctcctccatg 449
Query: 519 ttgttcacatcatgcatagtcgtctcctcgcattcatctatctccatgtctgtcagcttg 578
||| ||||||||||| ||||||||||||||||| || | ||||||||| |||||||||
Sbjct: 448 ttg---acatcatgcatcgtcgtctcctcgcattcgtcaagctccatgtcagtcagcttg 392
Query: 579 gatgaaggccttggtggaagtactgtctcgagagccttgcactgctctggtgccagcgag 638
|||| |||| |||||||||| || | |||||||||||||||||| || |||||||| |||
Sbjct: 391 gatgcaggctttggtggaagaacggcctcgagagccttgcactgatccggtgccagagag 332
Query: 639 tcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaa 698
|||||||||||||| |||||||| ||||| ||||| |||||||||||||||||||||||
Sbjct: 331 tcggggaactccactgtgaaatggatgtagagcttgcccttcatgaaaggcctctggtac 272
Query: 699 atcggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcaccaggg 758
|||||||| ||||| ||| | |||||||||||| ||||| || |||||||||||||||
Sbjct: 271 atcggcattccctcgtcgctgattgccttgaatgaatcaggcttgacaacttcaccaggg 212
Query: 759 tctgatttgatgagaagctgcctgttgtccagatgtgtaagaacaaattggaacccacat 818
| |||||| ||||| |||||||||||||||||||| || | ||| | ||||||||||||
Sbjct: 211 tttgatttaatgagcagctgcctgttgtccagatgggtcaaaacgagttggaacccacaa 152
Query: 819 agtgcttcggtcagagacaaggtgtgctcatagaagagatcttcaccctttcttttgaac 878
| ||||| || ||||| | ||||||||||||||||||||| |||||||||| ||||||
Sbjct: 151 aaagcttcagtgagagatatggtgtgctcatagaagagatcatcaccctttcgcttgaac 92
Query: 879 ttggagtggtccttctgctggaggacgaatacaatgtctccagtaacggtatcaggcgct 938
|| | ||| ||||||||||||| ||| |||||||||||||||||||| || ||||||||
Sbjct: 91 ttcgggtgttccttctgctggacgacaaatacaatgtctccagtaacagtgtcaggcgcc 32
Query: 939 tcatcagcttcaccagggaaggtgatcttct 969
||||||||||| |||||||||||||||||||
Sbjct: 31 tcatcagcttccccagggaaggtgatcttct 1
>gb|BE195094.1|BE195094 HVSMEh0088E12f Hordeum vulgare 5-45 DAP spike EST library HVcDNA0009
(5 to 45 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEh0088E12f, mRNA sequence
Length = 591
Score = 468 bits (236), Expect = e-130
Identities = 441/504 (87%), Gaps = 9/504 (1%)
Strand = Plus / Minus
Query: 1176 gggcacctcattgaagcaccagacttcgagcccttgcccttgcacttggagc-agatgac 1234
||||||||||| ||||| |||||||| ||||||||||| | |||| ||||| ||| |||
Sbjct: 510 gggcacctcat-gaagccccagacttggagcccttgccttgccact-ggagccagaggac 453
Query: 1235 attgcgcgaaagagagagcttctttgagattccattgtaaagatcttccagagaaacttt 1294
| | || |||||||||||||||||| | | ||||||||||||| ||| |||||| ||||
Sbjct: 452 actacgggaaagagagagcttctttagggtaccattgtaaagattttctagagaagcttt 393
Query: 1295 aagtgagtggactacatcttctcccctcctttgccttcttcccctgctgcttccaccacc 1354
||||| ||||| ||||| |||||| ||||||||||||| ||||||||||| ||||||||
Sbjct: 392 aagtggatggacaacatcctctcccttcctttgccttctgcccctgctgctgccaccacc 333
Query: 1355 tcc---tccaaaagagggtccaaaaaatgatgagaaaatgtcaaatggatcaa---catg 1408
|| |||||||||||| || |||||||||||||| |||||||||||||||| ||
Sbjct: 332 accacctccaaaagagggcccgaaaaatgatgagaatatgtcaaatggatcaactccacc 273
Query: 1409 ggatccaccaccacccattccttccttaagggcatcttcaccatactgatcataaatctc 1468
||| || ||||||||||||||||| || |||||||| ||||||| |||||| |||||
Sbjct: 272 acctcctcctccacccattccttccttgagagcatcttcgccatacttatcatagatctc 213
Query: 1469 acgtttctctggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggg 1528
||| ||||| || |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 212 acgcttctcagggtcactcaaaacctcataggcttgtgccagctccttgaacttctcggg 153
Query: 1529 gtcaccgcccttgtcggggtggttcttgatagcggccttgcggtaggccttcttgaggtc 1588
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 152 gtcaccgcccttgtcggggtggttcttgatggcggccttgcggtaggccttcttgaggtc 93
Query: 1589 gtcctgggacgccgacttgggcaccccgaggatctcatagtacttggtgttgtcgctctt 1648
|||||||| || ||||||||||||||||| ||| |||||||||||||||||||||||
Sbjct: 92 gtcctgggcggcgtccttgggcaccccgaggacctcgtagtacttggtgttgtcgctctt 33
Query: 1649 cttcggcgcgcgcccgaacatctt 1672
||| || ||||| |||||||||||
Sbjct: 32 cttgggggcgcggccgaacatctt 9
>gb|BI947010.1|BI947010 HVSMEl0003D06f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0003D06f, mRNA sequence
Length = 1048
Score = 464 bits (234), Expect = e-129
Identities = 410/468 (87%), Gaps = 3/468 (0%)
Strand = Plus / Minus
Query: 501 cgcatctcttcctcgatgttgttcacatcatgcatagtcgtctcctcgcattcatctatc 560
|||||||| ||||| |||||| ||||||||||||||||||||||||||||| || | |
Sbjct: 465 cgcatctcctcctccatgttg---acatcatgcatagtcgtctcctcgcattcgtcaagc 409
Query: 561 tccatgtctgtcagcttggatgaaggccttggtggaagtactgtctcgagagccttgcac 620
|||||||| ||||||||||||| |||| |||||||||| || | ||||||||||||||||
Sbjct: 408 tccatgtcagtcagcttggatgcaggctttggtggaagaacggcctcgagagccttgcac 349
Query: 621 tgctctggtgccagcgagtcggggaactccaccgtgaaatgaatgtacagcttccccttc 680
|| || |||||||| ||||||||||||||||| |||||||| ||||| ||||| ||||||
Sbjct: 348 tgatccggtgccagagagtcggggaactccactgtgaaatggatgtagagcttgcccttc 289
Query: 681 atgaaaggcctctggtaaatcggcatcccctcatcgtttattgccttgaattggtcaggt 740
||||||||||||||||| |||||||| ||||| ||| | |||||||||||| |||||
Sbjct: 288 atgaaaggcctctggtacatcggcattccctcgtcgctgattgccttgaatgaatcaggc 229
Query: 741 ttaacaacttcaccagggtctgatttgatgagaagctgcctgttgtccagatgtgtaaga 800
|| |||||||||||||||| |||||| ||||| |||||||||||||||||||| || | |
Sbjct: 228 ttgacaacttcaccagggtttgatttaatgagcagctgcctgttgtccagatgggtcaaa 169
Query: 801 acaaattggaacccacatagtgcttcggtcagagacaaggtgtgctcatagaagagatct 860
|| | |||||||||||| || ||||| || ||||| | |||||||||||||||||||||
Sbjct: 168 acgagttggaacccacaaagagcttcagtgagagatatggtgtgctcatagaagagatca 109
Query: 861 tcaccctttcttttgaacttggagtggtccttctgctggaggacgaatacaatgtctcca 920
|||||||||| |||||||| | ||| ||||||||||| | ||| |||||||||||||||
Sbjct: 108 tcaccctttcgcttgaacttcgggtgttccttctgctgcacgacaaatacaatgtctcca 49
Query: 921 gtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatcttc 968
||||| || |||||||| ||||||||||| ||||||||||||||||||
Sbjct: 48 gtaacagtgtcaggcgcctcatcagcttccccagggaaggtgatcttc 1
>gb|BF624632.2|BF624632 HVSMEa0017F04f Hordeum vulgare seedling shoot EST library HVcDNA0001
(Cold stress) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEa0017F04f, mRNA sequence
Length = 853
Score = 452 bits (228), Expect = e-125
Identities = 416/476 (87%), Gaps = 7/476 (1%)
Strand = Plus / Minus
Query: 1204 agcccttgcccttgcacttggagcagatgacattgcgcgaaaga-gagagcttctttgag 1262
|||||| | |||||||||||||||||| | || | | |||||| || ||||||||| ||
Sbjct: 581 agccctggtccttgcacttggagcagaggtcactttgggaaagaagacagcttctttcag 522
Query: 1263 attccattgtaaagatcttccagagaaactttaagtgagtggactacatcttctcccctc 1322
| ||||||||||||||||| |||||| |||| |||| ||| | ||||| |||||||||
Sbjct: 521 gtaccattgtaaagatcttctagagaagcttttagtggatggtcaacatcctctcccctc 462
Query: 1323 ctttgccttcttcccctgctgcttccaccacctcc---tccaaaagagggtccaaaaaat 1379
||||||||||| ||||||||||| |||||||| || |||||||||||| || ||||||
Sbjct: 461 ctttgccttctgcccctgctgctgccaccaccaccacctccaaaagagggcccgaaaaat 402
Query: 1380 gatgagaaaatgtcaaatggatcaa---catgggatccaccaccacccattccttcctta 1436
|||||||| |||||||||||||||| || ||| || |||||||||||||||||
Sbjct: 401 gatgagaatatgtcaaatggatcaactccaccacctcctcctccacccattccttccttg 342
Query: 1437 agggcatcttcaccatactgatcataaatctcacgtttctctggatcactcaaaacctca 1496
|| |||||||| ||||||| |||||| |||||||| ||||| || |||||||||||||||
Sbjct: 341 agagcatcttcgccatacttatcatagatctcacgcttctcagggtcactcaaaacctca 282
Query: 1497 taggcttgtgcgagctccttgaacttctcggggtcaccgcccttgtcggggtggttcttg 1556
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 taggcttgtgccagctccttgaacttctcggggtcaccgcccttgtcggggtggttcttg 222
Query: 1557 atagcggccttgcggtaggccttcttgaggtcgtcctgggacgccgacttgggcaccccg 1616
|| ||||||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 221 atggcggccttgcggtaggccttcttgaggtcgtcctgggcggcgtccttgggcaccccg 162
Query: 1617 aggatctcatagtacttggtgttgtcgctcttcttcggcgcgcgcccgaacatctt 1672
|||| ||| |||||||||||||||||||||||||| || ||||| |||||||||||
Sbjct: 161 aggacctcgtagtacttggtgttgtcgctcttcttgggggcgcggccgaacatctt 106
>gb|BU986091.1|BU986091 HF09K01r HF Hordeum vulgare subsp. vulgare cDNA clone HF09K01
5-PRIME, mRNA sequence
Length = 402
Score = 448 bits (226), Expect = e-124
Identities = 352/394 (89%)
Strand = Plus / Minus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatc 965
|||||||||||||||||||| || |||||||| ||||||||||| |||||||||||||||
Sbjct: 401 aatacaatgtctccagtaacagtgtcaggcgcctcatcagcttccccagggaaggtgatc 342
Query: 966 ttctggctgtgttgcattcccttctcaacatgaacctcaagaaccttcttctcctgaacg 1025
|||||| |||||||||| |||||||||||||||||||| | ||| |||||||||||||
Sbjct: 341 ttctggttgtgttgcatccccttctcaacatgaacctccaaaactttcttctcctgaaga 282
Query: 1026 accttctcacccttacaccctgggcagcggtccttctcgttgatgctctccccagtcccc 1085
|||||||||||||| || ||||||||||| || || ||||| || ||||||||||| |||
Sbjct: 281 accttctcacccttgcagcctgggcagcgatctttgtcgttaatactctccccagtgccc 222
Query: 1086 ttgcactcgttgcaaggctgctgcatctgctgtatcatggaaggccccagctgacgaatg 1145
||||| || ||||| | ||||||| |||||||||||||||||||||||||||||||||
Sbjct: 221 ttgcaatcattgcaggcatgctgcacctgctgtatcatggaaggccccagctgacgaata 162
Query: 1146 gtgactttcatacctgagccctggcacccagggcacctcattgaagcaccagacttcgag 1205
|| || ||||| ||||| |||||||| || ||||||||||| |||||||||||||| |||
Sbjct: 161 gtcaccttcatgcctgaaccctggcaacctgggcacctcatggaagcaccagacttggag 102
Query: 1206 cccttgcccttgcacttggagcagatgacattgcgcgaaagagagagcttctttgagatt 1265
||||||||||||||||||||||||| |||| | || ||||||||||||||||||||| |
Sbjct: 101 cccttgcccttgcacttggagcagaggacactacgggaaagagagagcttctttgaggta 42
Query: 1266 ccattgtaaagatcttccagagaaactttaagtg 1299
||||||||||||||||| |||||| |||||||||
Sbjct: 41 ccattgtaaagatcttctagagaagctttaagtg 8
>gb|BG365674.1|BG365674 HVSMEi0003L07f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0003L07f, mRNA sequence
Length = 791
Score = 440 bits (222), Expect = e-122
Identities = 471/554 (85%)
Strand = Plus / Minus
Query: 525 acatcatgcatagtcgtctcctcgcattcatctatctccatgtctgtcagcttggatgaa 584
|||||| |||| |||||||||| ||||| || | ||||||||| |||||| ||| | |
Sbjct: 572 acatcaagcatcgtcgtctcctggcattggtcaagctccatgtcagtcagcccggaggca 513
Query: 585 ggccttggtggaagtactgtctcgagagccttgcactgctctggtgccagcgagtcgggg 644
||| |||||||||| | | || |||||| ||||||| || |||||||| |||||||||
Sbjct: 512 ggctttggtggaagagcggcctaaagagccatgcactgatccggtgccagagagtcgggg 453
Query: 645 aactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatcggc 704
|||||||| |||||||| ||||| ||||| ||||||||||||||||||||||| ||||||
Sbjct: 452 aactccactgtgaaatggatgtagagcttgcccttcatgaaaggcctctggtacatcggc 393
Query: 705 atcccctcatcgtttattgccttgaattggtcaggtttaacaacttcaccagggtctgat 764
|| ||||| ||| | |||||||||||| ||||| || |||||||||||||||| ||||
Sbjct: 392 attccctcgtcgctgattgccttgaatgaatcaggcttgacaacttcaccagggtttgat 333
Query: 765 ttgatgagaagctgcctgttgtccagatgtgtaagaacaaattggaacccacatagtgct 824
|| ||||| |||||||||||||||||||| || ||||| | |||||||||||| || |||
Sbjct: 332 ttaatgagcagctgcctgttgtccagatgggtcagaacgagttggaacccacaaagagct 273
Query: 825 tcggtcagagacaaggtgtgctcatagaagagatcttcaccctttcttttgaacttggag 884
|| || | ||| | ||||||||||||||||||||| |||||||||| ||||| | | |
Sbjct: 272 tcagtgacagatatggtgtgctcatagaagagatcatcaccctttcgcttgaaatccggg 213
Query: 885 tggtccttctgctggaggacgaatacaatgtctccagtaacggtatcaggcgcttcatca 944
|| ||||| ||||||| ||| ||| |||||||||||||||| || |||||||| ||||||
Sbjct: 212 tgttccttgtgctggacgacaaatccaatgtctccagtaacagtgtcaggcgcctcatca 153
Query: 945 gcttcaccagggaaggtgatcttctggctgtgttgcattcccttctcaacatgaacctca 1004
||||| |||||||||||||||||||| |||||||||| ||||| ||||||||||||||
Sbjct: 152 gcttccacagggaaggtgatcttctggttgtgttgcatccccttgtcaacatgaacctcc 93
Query: 1005 agaaccttcttctcctgaacgaccttctcacccttacaccctgggcagcggtccttctcg 1064
||||| ||||||||||||| |||||||||||||| || | ||||||||| || || |||
Sbjct: 92 agaactttcttctcctgaagaaccttctcacccttgcagcatgggcagcgatctttgtcg 33
Query: 1065 ttgatgctctcccc 1078
|| || ||||||||
Sbjct: 32 ttaatactctcccc 19
>gb|BF065487.1|BF065487 HV_CEb0012J03f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0012J03f, mRNA sequence
Length = 615
Score = 430 bits (217), Expect = e-119
Identities = 383/437 (87%), Gaps = 6/437 (1%)
Strand = Plus / Minus
Query: 1242 gaaagagagagcttctttgagattccattgtaaagatcttccagagaaactttaagtgag 1301
|||| ||||||||||||| || ||||||||||||||||| ||| || |||||||||
Sbjct: 614 gaaaaagagagcttctttaaggacccattgtaaagatcttctagaaaagctttaagtgga 555
Query: 1302 tggactacatcttctcccctcctttgccttcttcccctgctgcttccaccacctcc---t 1358
||||| ||||| ||||||||||| |||||||| ||||||||||| |||||||| || |
Sbjct: 554 tggacaacatcctctcccctcctgtgccttctgcccctgctgctgccaccaccaccacct 495
Query: 1359 ccaaaagagggtccaaaaaatgatgagaaaatgtcaaatggatcaa---catgggatcca 1415
||||||||||| || |||||||||||||| |||||||||||||||| || |||
Sbjct: 494 ccaaaagagggcccgaaaaatgatgagaatatgtcaaatggatcaactccaccacctcct 435
Query: 1416 ccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttc 1475
|| ||||||||||||||||| || |||||||| ||||||| |||||| |||||||| |||
Sbjct: 434 cctccacccattccttccttgagagcatcttcgccatacttatcatagatctcacgcttc 375
Query: 1476 tctggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccg 1535
|| || |||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 374 tcagggtcactcaaaacctcataggcttgtgccagctccttgaacttctcggggtcaccg 315
Query: 1536 cccttgtcggggtggttcttgatagcggccttgcggtaggccttcttgaggtcgtcctgg 1595
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 314 cccttgtcggggtggttcttgatggcggccttgcggtaggccttcttgaggtcgtcctgg 255
Query: 1596 gacgccgacttgggcaccccgaggatctcatagtacttggtgttgtcgctcttcttcggc 1655
| || |||||| |||||||| | ||| |||||||||||||||||||||||||| ||
Sbjct: 254 gcggcgtccttgggaaccccgagaacctcgtagtacttggtgttgtcgctcttcttgggg 195
Query: 1656 gcgcgcccgaacatctt 1672
||||| |||||||||||
Sbjct: 194 gcgcggccgaacatctt 178
>gb|BQ470470.1|BQ470470 HX03B07r HX Hordeum vulgare subsp. vulgare cDNA clone HX03B07
5-PRIME, mRNA sequence
Length = 505
Score = 418 bits (211), Expect = e-115
Identities = 381/437 (87%), Gaps = 3/437 (0%)
Strand = Plus / Minus
Query: 501 cgcatctcttcctcgatgttgttcacatcatgcatagtcgtctcctcgcattcatctatc 560
|||||||| ||||| |||||| ||||||||||| |||||||||||||||||||| | |
Sbjct: 451 cgcatctcctcctccatgttg---acatcatgcatcgtcgtctcctcgcattcatcaagc 395
Query: 561 tccatgtctgtcagcttggatgaaggccttggtggaagtactgtctcgagagccttgcac 620
|||||||| ||||||||||||| |||| |||||||||| || | ||||||||||||||||
Sbjct: 394 tccatgtcagtcagcttggatgcaggctttggtggaagaacggcctcgagagccttgcac 335
Query: 621 tgctctggtgccagcgagtcggggaactccaccgtgaaatgaatgtacagcttccccttc 680
|| || |||||||| ||||||||||||||||| |||||||| ||||| ||||| ||||||
Sbjct: 334 tgatccggtgccagagagtcggggaactccactgtgaaatggatgtagagcttgcccttc 275
Query: 681 atgaaaggcctctggtaaatcggcatcccctcatcgtttattgccttgaattggtcaggt 740
||||||||||||||||| |||||||| ||||| ||| | |||||||||||| |||||
Sbjct: 274 atgaaaggcctctggtacatcggcattccctcgtcgctgattgccttgaatgaatcaggc 215
Query: 741 ttaacaacttcaccagggtctgatttgatgagaagctgcctgttgtccagatgtgtaaga 800
|| |||||||||||||||| |||||| ||||| |||||||||||||||||||| || | |
Sbjct: 214 ttgacaacttcaccagggtttgatttaatgagcagctgcctgttgtccagatgggtcaaa 155
Query: 801 acaaattggaacccacatagtgcttcggtcagagacaaggtgtgctcatagaagagatct 860
|| | |||||||||||| || ||||| || ||||| | |||||||||||||||||||||
Sbjct: 154 acgagttggaacccacaaagagcttcagtgagagatatggtgtgctcatagaagagatca 95
Query: 861 tcaccctttcttttgaacttggagtggtccttctgctggaggacgaatacaatgtctcca 920
|||||||| | |||||||| | ||| ||||||||||||| ||| |||||||||||||||
Sbjct: 94 tcacccttccgcttgaacttcgggtgttccttctgctggacgacaaatacaatgtctcca 35
Query: 921 gtaacggtatcaggcgc 937
||||| || ||||||||
Sbjct: 34 gtaacagtgtcaggcgc 18
>gb|BE421001.1|BE421001 HWM004.G06 ITEC HWM Barley Leaf Library Hordeum vulgare subsp.
vulgare cDNA clone HWM004.G06, mRNA sequence
Length = 1138
Score = 404 bits (204), Expect = e-111
Identities = 430/502 (85%), Gaps = 15/502 (2%)
Strand = Plus / Minus
Query: 408 gcttactgttgcgcgcactgcactctctgggctc---cgcccggcatctcgtcgtcctcc 464
|||||||||||||||||||||||||||||||| | | ||||||||||||||||| |||
Sbjct: 551 gcttactgttgcgcgcactgcactctctgggcacaccctcccggcatctcgtcgtcgtcc 492
Query: 465 tcgt---acgcctcctgggcagcg---tgagcttgcttcctgcgcatctcttcctcgatg 518
|||| |||||||||| ||||| || |||| ||| |||||||| ||||| |||
Sbjct: 491 tcgtcgtacgcctcctgagcagcagcatgggctt---tccgacgcatctcctcctccatg 435
Query: 519 ttgttcacatcatgcatagtcgtctcctcgcattcatctatctccatgtctgtcagcttg 578
||| ||||||||||| |||||||||||||||||||| | ||||||||| |||||||||
Sbjct: 434 ttg---acatcatgcatcgtcgtctcctcgcattcatcaagctccatgtcagtcagcttg 378
Query: 579 gatgaaggccttggtggaagtactgtctcgagagccttgcactgctctggtgccagcgag 638
|||| |||| |||||||||| || | |||||||||||||||||| || |||||||| |||
Sbjct: 377 gatgcaggctttggtggaagaacggcctcgagagccttgcactgatccggtgccagagag 318
Query: 639 tcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaa 698
|||||||||||||| |||||||| ||||| ||||| |||||||||||||||||||||||
Sbjct: 317 tcggggaactccactgtgaaatggatgtagagcttgcccttcatgaaaggcctctggtac 258
Query: 699 atcggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcaccaggg 758
|||||||| ||||| ||| | |||||||||||| ||||| || |||||||||||||||
Sbjct: 257 atcggcattccctcgtcgctgattgccttgaatgaatcaggcttgacaacttcaccaggg 198
Query: 759 tctgatttgatgagaagctgcctgttgtccagatgtgtaagaacaaattggaacccacat 818
| |||||| ||||| |||||||||||||||||||| || | ||| | ||||||||||||
Sbjct: 197 tttgatttaatgagcagctgcctgttgtccagatgggtcaaaacgagttggaacccacaa 138
Query: 819 agtgcttcggtcagagacaaggtgtgctcatagaagagatcttcaccctttcttttgaac 878
|| ||||| || ||||| | ||||||||||||||||||||| |||||||| | ||||||
Sbjct: 137 agagcttcagtgagagatatggtgtgctcatagaagagatcatcacccttccgcttgaac 78
Query: 879 ttggagtggtccttctgctgga 900
|| | ||| |||||||||||||
Sbjct: 77 ttcgggtgttccttctgctgga 56
>gb|AL511322.1|AL511322 AL511322 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY07L02u 3',
mRNA sequence
Length = 546
Score = 398 bits (201), Expect = e-109
Identities = 368/422 (87%), Gaps = 8/422 (1%)
Strand = Plus / Minus
Query: 1259 tgagattccattgtaaagatcttccagagaaactttaagtgagtggactacatcttctcc 1318
|||||| ||||||||||||||||| |||||| ||||||||| ||||| ||||| |||||
Sbjct: 544 tgagatcccattgtaaagatcttctagagaagctttaagtggatggacaacatcctctcc 485
Query: 1319 cctccttt-gccttcttcccctgctgcttccaccacctcctcc----aaaagagggtcca 1373
|||||||| || |||| ||| || |||| |||||||| || || ||||||||| ||
Sbjct: 484 cctccttttgcattctgcccttgntgctgccaccaccaccacctcccaaaagagggcccg 425
Query: 1374 aaaaatgatgagaaaatgtcaaatggatcaa---catgggatccaccaccacccattcct 1430
|||||||||||||| |||||||||||||||| || ||| || |||||||||| |
Sbjct: 424 aaaaatgatgagaatatgtcaaatggatcaactccaccacctcctcctccacccattcnt 365
Query: 1431 tccttaagggcatcttcaccatactgatcataaatctcacgtttctctggatcactcaaa 1490
||||| || |||||||| ||||||| |||||| |||||||| ||||| || |||||||||
Sbjct: 364 tccttgagagcatcttcgccatacttatcatagatctcacgcttctcagggtcactcaaa 305
Query: 1491 acctcataggcttgtgcgagctccttgaacttctcggggtcaccgcccttgtcggggtgg 1550
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 acctcataggcttgtgccagctccttgaacttctcggggtcaccgcccttgtcggggtgg 245
Query: 1551 ttcttgatagcggccttgcggtaggccttcttgaggtcgtcctgggacgccgacttgggc 1610
|||||||| || |||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 244 ttcttgatggcagccttgcggtaggccttcttgaggtcgtcctgggcggcgtccttgggc 185
Query: 1611 accccgaggatctcatagtacttggtgttgtcgctcttcttcggcgcgcgcccgaacatc 1670
|||||||||| ||| |||||||||||||||||||||||||| || ||||| |||||||||
Sbjct: 184 accccgaggacctcgtagtacttggtgttgtcgctcttcttgggggcgcggccgaacatc 125
Query: 1671 tt 1672
||
Sbjct: 124 tt 123
>gb|BF627842.2|BF627842 HVSMEb0005P05f Hordeum vulgare seedling shoot EST library HVcDNA0002
(Dehydration stress) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEb0005P05f, mRNA sequence
Length = 772
Score = 365 bits (184), Expect = 3e-099
Identities = 327/372 (87%), Gaps = 7/372 (1%)
Strand = Plus / Minus
Query: 1308 acatcttctcccctccttt-gccttcttcccctgctgcttccacca---cctcctccaaa 1363
||||| ||||||||||| | ||| ||| ||||||||| | |||||| || ||||||||
Sbjct: 408 acatcctctcccctcctctagccctctgcccctgctggtgccaccaacaccacctccaaa 349
Query: 1364 agagggtccaaaaaatgatgagaaaatgtcaaatggatcaa---catgggatccaccacc 1420
| |||| || |||||||||||||| |||||||||||||||| || ||| || ||
Sbjct: 348 acagggcccgaaaaatgatgagaatatgtcaaatggatcaactccaccacctcctcctcc 289
Query: 1421 acccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttctctgg 1480
||||||||||||||| || |||||||| ||||||| |||||| |||||||| ||||| ||
Sbjct: 288 acccattccttccttgagagcatcttcgccatacttatcatagatctcacgcttctcagg 229
Query: 1481 atcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccgccctt 1540
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 228 gtcactcaaaacctcataggcttgtgccagctccttgaacttctcggggtcaccgccctt 169
Query: 1541 gtcggggtggttcttgatagcggccttgcggtaggccttcttgaggtcgtcctgggacgc 1600
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||
Sbjct: 168 gtcggggtggttcttgatggcggccttgcggtaggccttcttgaggtcgtcctgggcggc 109
Query: 1601 cgacttgggcaccccgaggatctcatagtacttggtgttgtcgctcttcttcggcgcgcg 1660
||||||||||||||||| ||| |||||||||||||||||||||||||| || |||||
Sbjct: 108 gtccttgggcaccccgaggacctcgtagtacttggtgttgtcgctcttcttgggggcgcg 49
Query: 1661 cccgaacatctt 1672
|||||||||||
Sbjct: 48 gccgaacatctt 37
>gb|BQ468361.1|BQ468361 HM01A19T HM Hordeum vulgare subsp. vulgare cDNA clone HM01A19
5-PRIME, mRNA sequence
Length = 469
Score = 357 bits (180), Expect = 8e-097
Identities = 290/326 (88%), Gaps = 3/326 (0%)
Strand = Plus / Minus
Query: 1350 ccacctcctccaaaagagggtccaaaaaatgatgagaaaatgtcaaatggatcaa---ca 1406
||||| |||||||||||||| || |||||||||||||| |||||||||||||||| ||
Sbjct: 457 ccaccacctccaaaagagggcccgaaaaatgatgagaatatgtcaaatggatcaactcca 398
Query: 1407 tgggatccaccaccacccattccttccttaagggcatcttcaccatactgatcataaatc 1466
||| || |||||||||| |||||| || |||||||| ||||||| |||||| |||
Sbjct: 397 ccacctcctcctccacccattcattccttgagagcatcttcgccatacttatcatagatc 338
Query: 1467 tcacgtttctctggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcg 1526
||||| ||||| || |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 337 tcacgcttctcagggtcactcaaaacctcataggcttgtgccagctccttgaacttctcg 278
Query: 1527 gggtcaccgcccttgtcggggtggttcttgatagcggccttgcggtaggccttcttgagg 1586
|||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 277 gggtcaccgcccttgtcggggtggttcttgatggcagccttgcggtaggccttcttgagg 218
Query: 1587 tcgtcctgggacgccgacttgggcaccccgaggatctcatagtacttggtgttgtcgctc 1646
|||||||||| || ||||||||||||||||| ||| |||||||||||||||||||||
Sbjct: 217 tcgtcctgggcggcgtccttgggcaccccgaggacctcgtagtacttggtgttgtcgctc 158
Query: 1647 ttcttcggcgcgcgcccgaacatctt 1672
||||| || ||||| |||||||||||
Sbjct: 157 ttcttgggggcgcggccgaacatctt 132
>gb|AV930296.1|AV930296 AV930296 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd21o06 3', mRNA sequence
Length = 651
Score = 351 bits (177), Expect = 5e-095
Identities = 387/454 (85%), Gaps = 15/454 (3%)
Strand = Plus / Plus
Query: 408 gcttactgttgcgcgcactgcactctctgggctccgcc---cggcatctcgtcgtcctcc 464
|||||||||||||||||||||||||||||||| ||||| ||||||||||||||| |||
Sbjct: 204 gcttactgttgcgcgcactgcactctctgggcaccgcctcccggcatctcgtcgtcgtcc 263
Query: 465 tcgt---acgcctcctgggcagcg---tgagcttgcttcctgcgcatctcttcctcgatg 518
|||| |||||||||| ||||| || |||| ||| |||||||| ||||| |||
Sbjct: 264 tcgtcgtacgcctcctgagcagcagcatgggctt---tccgacgcatctcctcctccatg 320
Query: 519 ttgttcacatcatgcatagtcgtctcctcgcattcatctatctccatgtctgtcagcttg 578
||| ||||||||||| ||||||||||||||||| || | ||||||||| |||||||||
Sbjct: 321 ttg---acatcatgcatcgtcgtctcctcgcattcgtcaagctccatgtcagtcagcttg 377
Query: 579 gatgaaggccttggtggaagtactgtctcgagagccttgcactgctctggtgccagcgag 638
|||| |||| |||||||||| || | |||||||||||||||||| || |||||||| |||
Sbjct: 378 gatgcaggctttggtggaagaacggcctcgagagccttgcactgatccggtgccagagag 437
Query: 639 tcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaa 698
|||||||||||||| |||||||| ||||| ||||| |||||||||||||||||||||||
Sbjct: 438 tcggggaactccactgtgaaatggatgtagagcttgcccttcatgaaaggcctctggtac 497
Query: 699 atcggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcaccaggg 758
|||||||| ||||| ||| | |||||||||||| ||| | || ||||||||||||||
Sbjct: 498 atcggcattccctcgtcgctgattgccttgaatgaatcaagcttgncaacttcaccaggg 557
Query: 759 tctgatttgatgagaagctgcctgttgtccagatgtgtaagaacaaattggaacccacat 818
| |||||| ||||| |||||||||||||||||||| || | ||| | ||||||||||||
Sbjct: 558 tttgatttaatgagcagctgcctgttgtccagatgggtcaaaacgagttggaacccacaa 617
Query: 819 agtgcttcggtcagagacaaggtgtgctcataga 852
|| ||||| || ||||| | ||||||||||||||
Sbjct: 618 agagcttcagtgagagatatggtgtgctcataga 651
>gb|BU998754.1|BU998754 HI12B03r HI Hordeum vulgare subsp. vulgare cDNA clone HI12B03
5-PRIME, mRNA sequence
Length = 345
Score = 345 bits (174), Expect = 3e-093
Identities = 305/346 (88%), Gaps = 7/346 (2%)
Strand = Plus / Minus
Query: 1208 cttgcccttgcacttggagcagatgacattgcgcgaaagagagagcttctttgagattcc 1267
||||||||||||||||||||||| |||| | || ||||||||||||||||||||| | ||
Sbjct: 345 cttgcccttgcacttggagcagaggacactacgggaaagagagagcttctttgaggtacc 286
Query: 1268 attgtaaagatcttccagagaaactttaagtgagtggactacatcttctcccctcctttg 1327
||||||||||||||| |||||| ||||||||| ||||| ||||| ||||||||||||||
Sbjct: 285 attgtaaagatcttctagagaagctttaagtggatggacaacatcctctcccctcctttg 226
Query: 1328 ccttcttcccctgctgcttccaccacctcc---tccaaaagagggtccaaaaaatgatga 1384
|||||| ||||||||||| |||||||| || |||||||||||| || |||||||||||
Sbjct: 225 ccttctgcccctgctgctgccaccaccaccacctccaaaagagggcccgaaaaatgatga 166
Query: 1385 gaaaatgtcaaatggatcaa---catgggatccaccaccacccattccttccttaagggc 1441
||| |||||||||||||||| || ||| || ||||||||||||||||| || ||
Sbjct: 165 gaatatgtcaaatggatcaactccaccacctcctcctccacccattccttccttgagagc 106
Query: 1442 atcttcaccatactgatcataaatctcacgtttctctggatcactcaaaacctcataggc 1501
|||||| ||||||| |||||| |||||||| ||||| || ||||||||||||||||||||
Sbjct: 105 atcttcgccatacttatcatagatctcacgcttctcagggtcactcaaaacctcataggc 46
Query: 1502 ttgtgcgagctccttgaacttctcggggtcaccgcccttgtcgggg 1547
|||||| |||||||||||| ||||||||||||||||||||||||||
Sbjct: 45 ttgtgccagctccttgaac-tctcggggtcaccgcccttgtcgggg 1
>gb|BQ460661.1|BQ460661 HA06E17r HA Hordeum vulgare subsp. vulgare cDNA clone HA06E17
5-PRIME, mRNA sequence
Length = 391
Score = 337 bits (170), Expect = 7e-091
Identities = 233/254 (91%)
Strand = Plus / Minus
Query: 1419 ccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttctct 1478
||||||||||||||||| || |||||||| ||||||| |||||| |||||||| |||||
Sbjct: 379 ccacccattccttccttgagagcatcttcgccatacttatcatagatctcacgcttctca 320
Query: 1479 ggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccgccc 1538
|| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 319 gggtcactcaaaacctcataggcttgtgccagctccttgaacttctcggggtcaccgccc 260
Query: 1539 ttgtcggggtggttcttgatagcggccttgcggtaggccttcttgaggtcgtcctgggac 1598
|||||||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 259 ttgtcggggtggttcttgatggcagccttgcggtaggccttcttgaggtcgtcctgggcg 200
Query: 1599 gccgacttgggcaccccgaggatctcatagtacttggtgttgtcgctcttcttcggcgcg 1658
|| ||||||||||||||||| ||| |||||||||||||||||||||||||| || |||
Sbjct: 199 gcgtccttgggcaccccgaggacctcgtagtacttggtgttgtcgctcttcttgggggcg 140
Query: 1659 cgcccgaacatctt 1672
|| |||||||||||
Sbjct: 139 cggccgaacatctt 126
>gb|BU973690.1|BU973690 HB25L17r BC Hordeum vulgare subsp. vulgare cDNA clone HB25L17
5-PRIME, mRNA sequence
Length = 343
Score = 337 bits (170), Expect = 7e-091
Identities = 272/306 (88%)
Strand = Plus / Minus
Query: 839 ggtgtgctcatagaagagatcttcaccctttcttttgaacttggagtggtccttctgctg 898
||||||||||||||||||||| |||||||| | |||||||| | ||| |||||||||||
Sbjct: 327 ggtgtgctcatagaagagatcatcacccttccgcttgaacttcgggtgttccttctgctg 268
Query: 899 gaggacgaatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaa 958
|| ||| |||||||||||||||||||| || |||||||| ||||||||||| ||||||||
Sbjct: 267 gacgacaaatacaatgtctccagtaacagtgtcaggcgcctcatcagcttccccagggaa 208
Query: 959 ggtgatcttctggctgtgttgcattcccttctcaacatgaacctcaagaaccttcttctc 1018
||||||||||||| |||||||||| |||||||||||||||||||| | ||| ||||||||
Sbjct: 207 ggtgatcttctggttgtgttgcatccccttctcaacatgaacctccaaaactttcttctc 148
Query: 1019 ctgaacgaccttctcacccttacaccctgggcagcggtccttctcgttgatgctctcccc 1078
||||| |||||||||||||| || ||||||||||| || || ||||| || ||||||||
Sbjct: 147 ctgaagaaccttctcacccttgcagcctgggcagcgatctttgtcgttaatactctcccc 88
Query: 1079 agtccccttgcactcgttgcaaggctgctgcatctgctgtatcatggaaggccccagctg 1138
||| |||||||| || ||||| | ||||||| |||||||||||||||||||||||||||
Sbjct: 87 agtgcccttgcaatcattgcaggcatgctgcacctgctgtatcatggaaggccccagctg 28
Query: 1139 acgaat 1144
||||||
Sbjct: 27 acgaat 22
>gb|CA002853.1|CA002853 HS08L13r HS Hordeum vulgare subsp. vulgare cDNA clone HS08L13
5-PRIME, mRNA sequence
Length = 372
Score = 337 bits (170), Expect = 7e-091
Identities = 233/254 (91%)
Strand = Plus / Minus
Query: 1419 ccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttctct 1478
||||||||||||||||| || |||||||| ||||||| |||||| |||||||| |||||
Sbjct: 356 ccacccattccttccttgagagcatcttcgccatacttatcatagatctcacgcttctca 297
Query: 1479 ggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccgccc 1538
|| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 296 gggtcactcaaaacctcataggcttgtgccagctccttgaacttctcggggtcaccgccc 237
Query: 1539 ttgtcggggtggttcttgatagcggccttgcggtaggccttcttgaggtcgtcctgggac 1598
|||||||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 236 ttgtcggggtggttcttgatggcagccttgcggtaggccttcttgaggtcgtcctgggcg 177
Query: 1599 gccgacttgggcaccccgaggatctcatagtacttggtgttgtcgctcttcttcggcgcg 1658
|| ||||||||||||||||| ||| |||||||||||||||||||||||||| || |||
Sbjct: 176 gcgtccttgggcaccccgaggacctcgtagtacttggtgttgtcgctcttcttgggggcg 117
Query: 1659 cgcccgaacatctt 1672
|| |||||||||||
Sbjct: 116 cggccgaacatctt 103
>gb|CA003536.1|CA003536 HS14M16r HS Hordeum vulgare subsp. vulgare cDNA clone HS14M16
5-PRIME, mRNA sequence
Length = 369
Score = 337 bits (170), Expect = 7e-091
Identities = 233/254 (91%)
Strand = Plus / Minus
Query: 1419 ccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttctct 1478
||||||||||||||||| || |||||||| ||||||| |||||| |||||||| |||||
Sbjct: 359 ccacccattccttccttgagagcatcttcgccatacttatcatagatctcacgcttctca 300
Query: 1479 ggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccgccc 1538
|| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 299 gggtcactcaaaacctcataggcttgtgccagctccttgaacttctcggggtcaccgccc 240
Query: 1539 ttgtcggggtggttcttgatagcggccttgcggtaggccttcttgaggtcgtcctgggac 1598
|||||||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 239 ttgtcggggtggttcttgatggcagccttgcggtaggccttcttgaggtcgtcctgggcg 180
Query: 1599 gccgacttgggcaccccgaggatctcatagtacttggtgttgtcgctcttcttcggcgcg 1658
|| ||||||||||||||||| ||| |||||||||||||||||||||||||| || |||
Sbjct: 179 gcgtccttgggcaccccgaggacctcgtagtacttggtgttgtcgctcttcttgggggcg 120
Query: 1659 cgcccgaacatctt 1672
|| |||||||||||
Sbjct: 119 cggccgaacatctt 106
>gb|CA009497.1|CA009497 HU14E17r HU Hordeum vulgare subsp. vulgare cDNA clone HU14E17
5-PRIME, mRNA sequence
Length = 452
Score = 337 bits (170), Expect = 7e-091
Identities = 233/254 (91%)
Strand = Plus / Minus
Query: 1419 ccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttctct 1478
||||||||||||||||| || |||||||| ||||||| |||||| |||||||| |||||
Sbjct: 379 ccacccattccttccttgagagcatcttcgccatacttatcatagatctcacgcttctca 320
Query: 1479 ggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccgccc 1538
|| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 319 gggtcactcaaaacctcataggcttgtgccagctccttgaacttctcggggtcaccgccc 260
Query: 1539 ttgtcggggtggttcttgatagcggccttgcggtaggccttcttgaggtcgtcctgggac 1598
|||||||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 259 ttgtcggggtggttcttgatggcagccttgcggtaggccttcttgaggtcgtcctgggcg 200
Query: 1599 gccgacttgggcaccccgaggatctcatagtacttggtgttgtcgctcttcttcggcgcg 1658
|| ||||||||||||||||| ||| |||||||||||||||||||||||||| || |||
Sbjct: 199 gcgtccttgggcaccccgaggacctcgtagtacttggtgttgtcgctcttcttgggggcg 140
Query: 1659 cgcccgaacatctt 1672
|| |||||||||||
Sbjct: 139 cggccgaacatctt 126
Score = 73.8 bits (37), Expect = 2e-011
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 1349 accacctcctccaaaagagggtccaaaaaatgatgagaaaatgtcaaatggat 1401
|||||| |||||||||||||| || |||||||||||||| |||||||||||||
Sbjct: 452 accaccacctccaaaagagggcccgaaaaatgatgagaatatgtcaaatggat 400
>gb|CA018123.1|CA018123 HV07J04r HV Hordeum vulgare subsp. vulgare cDNA clone HV07J04
5-PRIME, mRNA sequence
Length = 298
Score = 337 bits (170), Expect = 7e-091
Identities = 233/254 (91%)
Strand = Plus / Minus
Query: 1419 ccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttctct 1478
||||||||||||||||| || |||||||| ||||||| |||||| |||||||| |||||
Sbjct: 285 ccacccattccttccttgagagcatcttcgccatacttatcatagatctcacgcttctca 226
Query: 1479 ggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccgccc 1538
|| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 225 gggtcactcaaaacctcataggcttgtgccagctccttgaacttctcggggtcaccgccc 166
Query: 1539 ttgtcggggtggttcttgatagcggccttgcggtaggccttcttgaggtcgtcctgggac 1598
|||||||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 165 ttgtcggggtggttcttgatggcagccttgcggtaggccttcttgaggtcgtcctgggcg 106
Query: 1599 gccgacttgggcaccccgaggatctcatagtacttggtgttgtcgctcttcttcggcgcg 1658
|| ||||||||||||||||| ||| |||||||||||||||||||||||||| || |||
Sbjct: 105 gcgtccttgggcaccccgaggacctcgtagtacttggtgttgtcgctcttcttgggggcg 46
Query: 1659 cgcccgaacatctt 1672
|| |||||||||||
Sbjct: 45 cggccgaacatctt 32
>gb|CA018856.1|CA018856 HV09N19r HV Hordeum vulgare subsp. vulgare cDNA clone HV09N19
5-PRIME, mRNA sequence
Length = 391
Score = 337 bits (170), Expect = 7e-091
Identities = 233/254 (91%)
Strand = Plus / Minus
Query: 1419 ccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttctct 1478
||||||||||||||||| || |||||||| ||||||| |||||| |||||||| |||||
Sbjct: 385 ccacccattccttccttgagagcatcttcgccatacttatcatagatctcacgcttctca 326
Query: 1479 ggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccgccc 1538
|| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 325 gggtcactcaaaacctcataggcttgtgccagctccttgaacttctcggggtcaccgccc 266
Query: 1539 ttgtcggggtggttcttgatagcggccttgcggtaggccttcttgaggtcgtcctgggac 1598
|||||||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 265 ttgtcggggtggttcttgatggcagccttgcggtaggccttcttgaggtcgtcctgggcg 206
Query: 1599 gccgacttgggcaccccgaggatctcatagtacttggtgttgtcgctcttcttcggcgcg 1658
|| ||||||||||||||||| ||| |||||||||||||||||||||||||| || |||
Sbjct: 205 gcgtccttgggcaccccgaggacctcgtagtacttggtgttgtcgctcttcttgggggcg 146
Query: 1659 cgcccgaacatctt 1672
|| |||||||||||
Sbjct: 145 cggccgaacatctt 132
>gb|CV059013.1|CV059013 BNEL43d7 Barley EST endosperm library Hordeum vulgare subsp. vulgare
cDNA clone BNEL43d7 5' similar to DnaJ homolog, mRNA
sequence
Length = 603
Score = 337 bits (170), Expect = 7e-091
Identities = 233/254 (91%)
Strand = Plus / Minus
Query: 1419 ccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttctct 1478
||||||||||||||||| || |||||||| ||||||| |||||| |||||||| |||||
Sbjct: 371 ccacccattccttccttgagagcatcttcgccatacttatcatagatctcacgcttctca 312
Query: 1479 ggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccgccc 1538
|| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 311 gggtcactcaaaacctcataggcttgtgccagctccttgaacttctcggggtcaccgccc 252
Query: 1539 ttgtcggggtggttcttgatagcggccttgcggtaggccttcttgaggtcgtcctgggac 1598
|||||||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 251 ttgtcggggtggttcttgatggcagccttgcggtaggccttcttgaggtcgtcctgggcg 192
Query: 1599 gccgacttgggcaccccgaggatctcatagtacttggtgttgtcgctcttcttcggcgcg 1658
|| ||||||||||||||||| ||| |||||||||||||||||||||||||| || |||
Sbjct: 191 gcgtccttgggcaccccgaggacctcgtagtacttggtgttgtcgctcttcttgggggcg 132
Query: 1659 cgcccgaacatctt 1672
|| |||||||||||
Sbjct: 131 cggccgaacatctt 118
Score = 161 bits (81), Expect = 9e-038
Identities = 143/163 (87%), Gaps = 3/163 (1%)
Strand = Plus / Minus
Query: 1242 gaaagagagagcttctttgagattccattgtaaagatcttccagagaaactttaagtgag 1301
|||||| | ||||||||| || | ||||||||||||||||| |||||| |||||||||
Sbjct: 554 gaaagaaaaagcttctttaaggtcccattgtaaagatcttctagagaagctttaagtgga 495
Query: 1302 tggactacatcttctcccctcctttgccttcttcccctgctgct---tccaccacctcct 1358
||||| ||||| |||||||||||||||||||| ||||||||||| |||||||| |||
Sbjct: 494 tggacaacatcctctcccctcctttgccttctgcccctgctgctgccaccaccaccacct 435
Query: 1359 ccaaaagagggtccaaaaaatgatgagaaaatgtcaaatggat 1401
||||||||||| || |||||||||||||| |||||||||||||
Sbjct: 434 ccaaaagagggcccgaaaaatgatgagaatatgtcaaatggat 392
>gb|CA019760.1|CA019760 HV13A11r HV Hordeum vulgare subsp. vulgare cDNA clone HV13A11
5-PRIME, mRNA sequence
Length = 378
Score = 335 bits (169), Expect = 3e-090
Identities = 232/253 (91%)
Strand = Plus / Minus
Query: 1420 cacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttctctg 1479
|||||||||||||||| || |||||||| ||||||| |||||| |||||||| ||||| |
Sbjct: 378 cacccattccttccttgagagcatcttcgccatacttatcatagatctcacgcttctcag 319
Query: 1480 gatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccgccct 1539
| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 318 ggtcactcaaaacctcataggcttgtgccagctccttgaacttctcggggtcaccgccct 259
Query: 1540 tgtcggggtggttcttgatagcggccttgcggtaggccttcttgaggtcgtcctgggacg 1599
||||||||||||||||||| || |||||||||||||||||||||||||||||||||| |
Sbjct: 258 tgtcggggtggttcttgatggcagccttgcggtaggccttcttgaggtcgtcctgggcgg 199
Query: 1600 ccgacttgggcaccccgaggatctcatagtacttggtgttgtcgctcttcttcggcgcgc 1659
| ||||||||||||||||| ||| |||||||||||||||||||||||||| || ||||
Sbjct: 198 cgtccttgggcaccccgaggacctcgtagtacttggtgttgtcgctcttcttgggggcgc 139
Query: 1660 gcccgaacatctt 1672
| |||||||||||
Sbjct: 138 ggccgaacatctt 126
>gb|CA020023.1|CA020023 HV14B22r HV Hordeum vulgare subsp. vulgare cDNA clone HV14B22
5-PRIME, mRNA sequence
Length = 386
Score = 335 bits (169), Expect = 3e-090
Identities = 232/253 (91%)
Strand = Plus / Minus
Query: 1420 cacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttctctg 1479
|||||||||||||||| || |||||||| ||||||| |||||| |||||||| ||||| |
Sbjct: 386 cacccattccttccttgagagcatcttcgccatacttatcatagatctcacgcttctcag 327
Query: 1480 gatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccgccct 1539
| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 326 ggtcactcaaaacctcataggcttgtgccagctccttgaacttctcggggtcaccgccct 267
Query: 1540 tgtcggggtggttcttgatagcggccttgcggtaggccttcttgaggtcgtcctgggacg 1599
||||||||||||||||||| || |||||||||||||||||||||||||||||||||| |
Sbjct: 266 tgtcggggtggttcttgatggcagccttgcggtaggccttcttgaggtcgtcctgggcgg 207
Query: 1600 ccgacttgggcaccccgaggatctcatagtacttggtgttgtcgctcttcttcggcgcgc 1659
| ||||||||||||||||| ||| |||||||||||||||||||||||||| || ||||
Sbjct: 206 cgtccttgggcaccccgaggacctcgtagtacttggtgttgtcgctcttcttgggggcgc 147
Query: 1660 gcccgaacatctt 1672
| |||||||||||
Sbjct: 146 ggccgaacatctt 134
>gb|CA020250.1|CA020250 HV14M06r HV Hordeum vulgare subsp. vulgare cDNA clone HV14M06
5-PRIME, mRNA sequence
Length = 356
Score = 329 bits (166), Expect = 2e-088
Identities = 229/250 (91%)
Strand = Plus / Minus
Query: 1423 ccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttctctggat 1482
||||||||||||| || |||||||| ||||||| |||||| |||||||| ||||| || |
Sbjct: 356 ccattccttccttgagagcatcttcgccatacttatcatagatctcacgcttctcagggt 297
Query: 1483 cactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccgcccttgt 1542
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 296 cactcaaaacctcataggcttgtgccagctccttgaacttctcggggtcaccgcccttgt 237
Query: 1543 cggggtggttcttgatagcggccttgcggtaggccttcttgaggtcgtcctgggacgccg 1602
|||||||||||||||| || |||||||||||||||||||||||||||||||||| ||
Sbjct: 236 cggggtggttcttgatggcagccttgcggtaggccttcttgaggtcgtcctgggcggcgt 177
Query: 1603 acttgggcaccccgaggatctcatagtacttggtgttgtcgctcttcttcggcgcgcgcc 1662
||||||||||||||||| ||| |||||||||||||||||||||||||| || ||||| |
Sbjct: 176 ccttgggcaccccgaggacctcgtagtacttggtgttgtcgctcttcttgggggcgcggc 117
Query: 1663 cgaacatctt 1672
||||||||||
Sbjct: 116 cgaacatctt 107
>gb|CB875982.1|CB875982 HX09O18w HX Hordeum vulgare subsp. vulgare cDNA clone HX09O18
3-PRIME, mRNA sequence
Length = 602
Score = 329 bits (166), Expect = 2e-088
Identities = 335/388 (86%), Gaps = 15/388 (3%)
Strand = Plus / Plus
Query: 408 gcttactgttgcgcgcactgcactctctgggctccgcc---cggcatctcgtcgtcctcc 464
|||||||||||||||||||||||||||||||| ||||| ||||||||||||||| |||
Sbjct: 221 gcttactgttgcgcgcactgcactctctgggcaccgcctcccggcatctcgtcgtcgtcc 280
Query: 465 tcgt---acgcctcctgggcagcg---tgagcttgcttcctgcgcatctcttcctcgatg 518
|||| |||||||||| ||||| || |||| ||| |||||||| ||||| |||
Sbjct: 281 tcgtcgtacgcctcctgagcagcagcatgggctt---tccgacgcatctcctcctccatg 337
Query: 519 ttgttcacatcatgcatagtcgtctcctcgcattcatctatctccatgtctgtcagcttg 578
||| ||||||||||| |||||||||||||||||||| | ||||||||| |||||||||
Sbjct: 338 ttg---acatcatgcatcgtcgtctcctcgcattcatcaagctccatgtcagtcagcttg 394
Query: 579 gatgaaggccttggtggaagtactgtctcgagagccttgcactgctctggtgccagcgag 638
|||| |||| |||||||||| || | |||||||||||||||||| || |||||||| |||
Sbjct: 395 gatgcaggctttggtggaagaacggcctcgagagccttgcactgatccggtgccagagag 454
Query: 639 tcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaa 698
|||||||||||||| |||||||| ||||| ||||| |||||||||||||||||||||||
Sbjct: 455 tcggggaactccactgtgaaatggatgtagagcttgcccttcatgaaaggcctctggtac 514
Query: 699 atcggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcaccaggg 758
|||||||| ||||| ||| | |||||||||||| ||||| || |||||||||||||||
Sbjct: 515 atcggcattccctcgtcgctgattgccttgaatgaatcaggcttgacaacttcaccaggg 574
Query: 759 tctgatttgatgagaagctgcctgttgt 786
| |||||| ||||| |||||||||||||
Sbjct: 575 tttgatttaatgagcagctgcctgttgt 602
>gb|BQ664293.1|BQ664293 HV02L16u HV Hordeum vulgare subsp. vulgare cDNA clone HV02L16
3-PRIME, mRNA sequence
Length = 593
Score = 319 bits (161), Expect = 2e-085
Identities = 330/383 (86%), Gaps = 15/383 (3%)
Strand = Plus / Plus
Query: 408 gcttactgttgcgcgcactgcactctctgggctccgcc---cggcatctcgtcgtcctcc 464
|||||||||||||||||||||||||||||||| ||||| ||||||||||||||| |||
Sbjct: 217 gcttactgttgcgcgcactgcactctctgggcaccgcctcccggcatctcgtcgtcgtcc 276
Query: 465 tcgt---acgcctcctgggcagcg---tgagcttgcttcctgcgcatctcttcctcgatg 518
|||| |||||||||| ||||| || |||| ||| |||||||| ||||| |||
Sbjct: 277 tcgtcgtacgcctcctgagcagcagcatgggctt---tccgacgcatctcctcctccatg 333
Query: 519 ttgttcacatcatgcatagtcgtctcctcgcattcatctatctccatgtctgtcagcttg 578
||| ||||||||||| |||||||||||||||||||| | ||||||||| |||||||||
Sbjct: 334 ttg---acatcatgcatcgtcgtctcctcgcattcatcaagctccatgtcagtcagcttg 390
Query: 579 gatgaaggccttggtggaagtactgtctcgagagccttgcactgctctggtgccagcgag 638
|||| |||| |||||||||| || | |||||||||||||||||| || |||||||| |||
Sbjct: 391 gatgcaggctttggtggaagaacggcctcgagagccttgcactgatccggtgccagagag 450
Query: 639 tcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaa 698
|||||||||||||| |||||||| ||||| ||||| |||||||||||||||||||||||
Sbjct: 451 tcggggaactccactgtgaaatggatgtagagcttgcccttcatgaaaggcctctggtac 510
Query: 699 atcggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcaccaggg 758
|||||||| ||||| ||| | |||||||||||| ||||| || |||||||||||||||
Sbjct: 511 atcggcattccctcgtcgctgattgccttgaatgaatcaggcttgacaacttcaccaggg 570
Query: 759 tctgatttgatgagaagctgcct 781
| |||||| ||||| ||||||||
Sbjct: 571 tttgatttaatgagcagctgcct 593
>gb|BQ665339.1|BQ665339 HX03B07u HX Hordeum vulgare subsp. vulgare cDNA clone HX03B07
3-PRIME, mRNA sequence
Length = 597
Score = 311 bits (157), Expect = 4e-083
Identities = 329/383 (85%), Gaps = 15/383 (3%)
Strand = Plus / Plus
Query: 408 gcttactgttgcgcgcactgcactctctgggctccgcc---cggcatctcgtcgtcctcc 464
|||||||||||||||||||||||||| ||||| ||||| ||||||||||||||| |||
Sbjct: 221 gcttactgttgcgcgcactgcactctttgggcaccgcctcccggcatctcgtcgtcgtcc 280
Query: 465 tcgt---acgcctcctgggcagcg---tgagcttgcttcctgcgcatctcttcctcgatg 518
|||| |||||||||| ||||| || |||| ||| |||||||| ||||| |||
Sbjct: 281 tcgtcgtacgcctcctgagcagcagcatgggctt---tccgacgcatctcctcctccatg 337
Query: 519 ttgttcacatcatgcatagtcgtctcctcgcattcatctatctccatgtctgtcagcttg 578
||| ||||||||||| |||||||||||||||||||| | ||||||||| |||||||||
Sbjct: 338 ttg---acatcatgcatcgtcgtctcctcgcattcatcaagctccatgtcagtcagcttg 394
Query: 579 gatgaaggccttggtggaagtactgtctcgagagccttgcactgctctggtgccagcgag 638
|||| |||| |||||||||| || | |||||||||||||||||| || |||||||| |||
Sbjct: 395 gatgcaggctttggtggaagaacggcctcgagagccttgcactgatccggtgccagagag 454
Query: 639 tcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaa 698
|||||||||||||| |||||||| ||||| ||||| |||||||||||||||||||||||
Sbjct: 455 tcggggaactccactgtgaaatggatgtagagcttgcccttcatgaaaggcctctggtac 514
Query: 699 atcggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcaccaggg 758
|||||||| ||||| ||| | |||||||||||| ||||| || |||||||||||||||
Sbjct: 515 atcggcattccctcgtcgctgattgccttgaatgaatcaggcttgacaacttcaccaggg 574
Query: 759 tctgatttgatgagaagctgcct 781
| |||||| ||||| ||||||||
Sbjct: 575 tttgatttaatgagcagctgcct 597
>gb|CA031428.1|CA031428 HX09O18r HX Hordeum vulgare subsp. vulgare cDNA clone HX09O18
5-PRIME, mRNA sequence
Length = 460
Score = 311 bits (157), Expect = 4e-083
Identities = 211/229 (92%)
Strand = Plus / Minus
Query: 1419 ccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttctct 1478
||||||||||||||||| || |||||||| ||||||| |||||| |||||||| |||||
Sbjct: 285 ccacccattccttccttgagagcatcttcgccatacttatcatagatctcacgcttctca 226
Query: 1479 ggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccgccc 1538
|| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 225 gggtcactcaaaacctcataggcttgtgccagctccttgaacttctcggggtcaccgccc 166
Query: 1539 ttgtcggggtggttcttgatagcggccttgcggtaggccttcttgaggtcgtcctgggac 1598
|||||||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 165 ttgtcggggtggttcttgatggcagccttgcggtaggccttcttgaggtcgtcctgggcg 106
Query: 1599 gccgacttgggcaccccgaggatctcatagtacttggtgttgtcgctct 1647
|| ||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 105 gcgtccttgggcaccccgaggacctcgtagtacttggtgttgtcgctct 57
Score = 167 bits (84), Expect = 2e-039
Identities = 140/158 (88%), Gaps = 3/158 (1%)
Strand = Plus / Minus
Query: 1251 agcttctttgagattccattgtaaagatcttccagagaaactttaagtgagtggactaca 1310
||||||||| || | ||||||||||||||||| |||||| ||||||||| ||||| |||
Sbjct: 460 agcttctttaaggtaccattgtaaagatcttctagagaagctttaagtggatggacaaca 401
Query: 1311 tcttctcccctcctttgccttcttcccctgctgct---tccaccacctcctccaaaagag 1367
|| |||||||||||||||||||| ||||||||||| |||||||| ||||||||||||
Sbjct: 400 tcctctcccctcctttgccttctgcccctgctgctgccaccaccaccacctccaaaagag 341
Query: 1368 ggtccaaaaaatgatgagaaaatgtcaaatggatcaac 1405
|| || |||||||||||||| |||||||||||||||||
Sbjct: 340 ggcccgaaaaatgatgagaatatgtcaaatggatcaac 303
>gb|BQ761673.1|BQ761673 EBem10_SQ001_B18_R embryo, 2 Day germination, no treatment, cv
Optic, EBem10 Hordeum vulgare subsp. vulgare cDNA clone
EBem10_SQ001_B18 5', mRNA sequence
Length = 312
Score = 301 bits (152), Expect = 4e-080
Identities = 272/312 (87%)
Strand = Plus / Minus
Query: 607 cgagagccttgcactgctctggtgccagcgagtcggggaactccaccgtgaaatgaatgt 666
|||||||||||||||| || |||||||| ||||||||||||||||| |||||||| ||||
Sbjct: 312 cgagagccttgcactgatccggtgccagagagtcggggaactccactgtgaaatggatgt 253
Query: 667 acagcttccccttcatgaaaggcctctggtaaatcggcatcccctcatcgtttattgcct 726
| ||||| ||||||||||||||||||||||| |||||||| ||||| ||| | |||||||
Sbjct: 252 agagcttgcccttcatgaaaggcctctggtacatcggcattccctcgtcgctgattgcct 193
Query: 727 tgaattggtcaggtttaacaacttcaccagggtctgatttgatgagaagctgcctgttgt 786
||||| ||||| || |||||||||||||||| |||||| ||||| |||||||||||||
Sbjct: 192 tgaatgaatcaggcttgacaacttcaccagggtttgatttaatgagcagctgcctgttgt 133
Query: 787 ccagatgtgtaagaacaaattggaacccacatagtgcttcggtcagagacaaggtgtgct 846
||||||| || | ||| | |||||||||||| || ||||| || ||||| | ||||||||
Sbjct: 132 ccagatgggtcaaaacgagttggaacccacaaagagcttcagtgagagatatggtgtgct 73
Query: 847 catagaagagatcttcaccctttcttttgaacttggagtggtccttctgctggaggacga 906
||||||||||||| |||||||| | |||||||| | ||| ||||||||||||| ||| |
Sbjct: 72 catagaagagatcatcacccttccgcttgaacttcgggtgttccttctgctggacgacaa 13
Query: 907 atacaatgtctc 918
||||||||||||
Sbjct: 12 atacaatgtctc 1
>gb|AL506148.1|AL506148 AL506148 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY02D05T 5',
mRNA sequence
Length = 491
Score = 283 bits (143), Expect = 9e-075
Identities = 238/269 (88%), Gaps = 3/269 (1%)
Strand = Plus / Minus
Query: 1412 tccaccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacg 1471
||||||||| |||||||| ||||| |||||||| ||||||||||||||||| ||||| ||
Sbjct: 363 tccaccacctcccattccctccttgagggcatcctcaccatactgatcatagatctctcg 304
Query: 1472 tttctctggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtc 1531
||||| ||||||||||| |||||||| || || || |||||||||||||||||||||||
Sbjct: 303 cttctcaggatcactcaagacctcataagcctgagctagctccttgaacttctcggggtc 244
Query: 1532 accgcccttgtcggggtggttcttgatagcggccttgcggtaggccttcttgaggtcgtc 1591
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 243 gccgcccttgtcggggtggttcttgatggcggccttgcggtaggccttcttgaggtcgtc 184
Query: 1592 ctgggacgccgacttgggcaccccgaggatctcatagtacttggtgttgtcgctcttctt 1651
||||||||| ||||||||| || |||||||| ||||| ||| |||||||||||||
Sbjct: 183 ctgggacgcgtccttgggcacgcccaggatctcgtagtagcgcgtgctgtcgctcttctt 124
Query: 1652 cggcg---cgcgcccgaacatcttgcctt 1677
||||| |||| |||||||||| |||||
Sbjct: 123 cggcggcccgcggccgaacatctcgcctt 95
>gb|AL507668.1|AL507668 AL507668 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY06I06V 5',
mRNA sequence
Length = 700
Score = 283 bits (143), Expect = 9e-075
Identities = 238/269 (88%), Gaps = 3/269 (1%)
Strand = Plus / Minus
Query: 1412 tccaccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacg 1471
||||||||| |||||||| ||||| |||||||| ||||||||||||||||| ||||| ||
Sbjct: 349 tccaccacctcccattccctccttgagggcatcctcaccatactgatcatagatctctcg 290
Query: 1472 tttctctggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtc 1531
||||| ||||||||||| |||||||| || || || |||||||||||||||||||||||
Sbjct: 289 cttctcaggatcactcaagacctcataagcctgagctagctccttgaacttctcggggtc 230
Query: 1532 accgcccttgtcggggtggttcttgatagcggccttgcggtaggccttcttgaggtcgtc 1591
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 229 gccgcccttgtcggggtggttcttgatggcggccttgcggtaggccttcttgaggtcgtc 170
Query: 1592 ctgggacgccgacttgggcaccccgaggatctcatagtacttggtgttgtcgctcttctt 1651
||||||||| ||||||||| || |||||||| ||||| ||| |||||||||||||
Sbjct: 169 ctgggacgcgtccttgggcacgcccaggatctcgtagtagcgcgtgctgtcgctcttctt 110
Query: 1652 cggcg---cgcgcccgaacatcttgcctt 1677
||||| |||| |||||||||| |||||
Sbjct: 109 cggcggcccgcggccgaacatctcgcctt 81
Score = 38.2 bits (19), Expect = 0.94
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 1101 ggctgctgcatctgctgtatcat 1123
||||||||||| |||||||||||
Sbjct: 669 ggctgctgcatttgctgtatcat 647
Score = 38.2 bits (19), Expect = 0.94
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 1335 cccctgctgcttccaccacctcc 1357
||||||||||| |||||||||||
Sbjct: 429 cccctgctgctgccaccacctcc 407
>gb|BI776717.2|BI776717 EBpi07_SQ001_I13_R pistil, 12 DPA, no treatment, cv Optic, EBpi07
Hordeum vulgare subsp. vulgare cDNA clone
EBpi07_SQ001_I13 5', mRNA sequence
Length = 575
Score = 283 bits (143), Expect = 9e-075
Identities = 238/269 (88%), Gaps = 3/269 (1%)
Strand = Plus / Minus
Query: 1412 tccaccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacg 1471
||||||||| |||||||| ||||| |||||||| ||||||||||||||||| ||||| ||
Sbjct: 351 tccaccacctcccattccctccttgagggcatcctcaccatactgatcatagatctctcg 292
Query: 1472 tttctctggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtc 1531
||||| ||||||||||| |||||||| || || || |||||||||||||||||||||||
Sbjct: 291 cttctcaggatcactcaagacctcataagcctgagctagctccttgaacttctcggggtc 232
Query: 1532 accgcccttgtcggggtggttcttgatagcggccttgcggtaggccttcttgaggtcgtc 1591
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 231 gccgcccttgtcggggtggttcttgatggcggccttgcggtaggccttcttgaggtcgtc 172
Query: 1592 ctgggacgccgacttgggcaccccgaggatctcatagtacttggtgttgtcgctcttctt 1651
||||||||| ||||||||| || |||||||| ||||| ||| |||||||||||||
Sbjct: 171 ctgggacgcgtccttgggcacgcccaggatctcgtagtagcgcgtgctgtcgctcttctt 112
Query: 1652 cggcg---cgcgcccgaacatcttgcctt 1677
||||| |||| |||||||||| |||||
Sbjct: 111 cggcggcccgcggccgaacatctcgcctt 83
Score = 38.2 bits (19), Expect = 0.94
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 1335 cccctgctgcttccaccacctcc 1357
||||||||||| |||||||||||
Sbjct: 431 cccctgctgctgccaccacctcc 409
>gb|BM370867.2|BM370867 EBro04_SQ002_J15_R root, 3 week, salt-stressed, cv Optic, EBro04
Hordeum vulgare subsp. vulgare cDNA clone
EBro04_SQ002_J15 5', mRNA sequence
Length = 445
Score = 283 bits (143), Expect = 9e-075
Identities = 238/269 (88%), Gaps = 3/269 (1%)
Strand = Plus / Minus
Query: 1412 tccaccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacg 1471
||||||||| |||||||| ||||| |||||||| ||||||||||||||||| ||||| ||
Sbjct: 364 tccaccacctcccattccctccttgagggcatcctcaccatactgatcatagatctctcg 305
Query: 1472 tttctctggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtc 1531
||||| ||||||||||| |||||||| || || || |||||||||||||||||||||||
Sbjct: 304 cttctcaggatcactcaagacctcataagcctgagctagctccttgaacttctcggggtc 245
Query: 1532 accgcccttgtcggggtggttcttgatagcggccttgcggtaggccttcttgaggtcgtc 1591
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 244 gccgcccttgtcggggtggttcttgatggcggccttgcggtaggccttcttgaggtcgtc 185
Query: 1592 ctgggacgccgacttgggcaccccgaggatctcatagtacttggtgttgtcgctcttctt 1651
||||||||| ||||||||| || |||||||| ||||| ||| |||||||||||||
Sbjct: 184 ctgggacgcgtccttgggcacgcccaggatctcgtagtagcgcgtgctgtcgctcttctt 125
Query: 1652 cggcg---cgcgcccgaacatcttgcctt 1677
||||| |||| |||||||||| |||||
Sbjct: 124 cggcggcccgcggccgaacatctcgcctt 96
>gb|BQ767061.1|BQ767061 EBro08_SQ007_I24_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ007_I24 5', mRNA sequence
Length = 580
Score = 283 bits (143), Expect = 9e-075
Identities = 238/269 (88%), Gaps = 3/269 (1%)
Strand = Plus / Minus
Query: 1412 tccaccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacg 1471
||||||||| |||||||| ||||| |||||||| ||||||||||||||||| ||||| ||
Sbjct: 335 tccaccacctcccattccctccttgagggcatcctcaccatactgatcatagatctctcg 276
Query: 1472 tttctctggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtc 1531
||||| ||||||||||| |||||||| || || || |||||||||||||||||||||||
Sbjct: 275 cttctcaggatcactcaagacctcataagcctgagctagctccttgaacttctcggggtc 216
Query: 1532 accgcccttgtcggggtggttcttgatagcggccttgcggtaggccttcttgaggtcgtc 1591
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 215 gccgcccttgtcggggtggttcttgatggcggccttgcggtaggccttcttgaggtcgtc 156
Query: 1592 ctgggacgccgacttgggcaccccgaggatctcatagtacttggtgttgtcgctcttctt 1651
||||||||| ||||||||| || |||||||| ||||| ||| |||||||||||||
Sbjct: 155 ctgggacgcgtccttgggcacgcccaggatctcgtagtagcgcgtgctgtcgctcttctt 96
Query: 1652 cggcg---cgcgcccgaacatcttgcctt 1677
||||| |||| |||||||||| |||||
Sbjct: 95 cggcggcccgcggccgaacatctcgcctt 67
Score = 38.2 bits (19), Expect = 0.94
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 1335 cccctgctgcttccaccacctcc 1357
||||||||||| |||||||||||
Sbjct: 415 cccctgctgctgccaccacctcc 393
>gb|CA002173.1|CA002173 HS06L19r HS Hordeum vulgare subsp. vulgare cDNA clone HS06L19
5-PRIME, mRNA sequence
Length = 406
Score = 283 bits (143), Expect = 9e-075
Identities = 238/269 (88%), Gaps = 3/269 (1%)
Strand = Plus / Minus
Query: 1412 tccaccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacg 1471
||||||||| |||||||| ||||| |||||||| ||||||||||||||||| ||||| ||
Sbjct: 372 tccaccacctcccattccctccttgagggcatcctcaccatactgatcatagatctctcg 313
Query: 1472 tttctctggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtc 1531
||||| ||||||||||| |||||||| || || || |||||||||||||||||||||||
Sbjct: 312 cttctcaggatcactcaagacctcataagcctgagctagctccttgaacttctcggggtc 253
Query: 1532 accgcccttgtcggggtggttcttgatagcggccttgcggtaggccttcttgaggtcgtc 1591
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 252 gccgcccttgtcggggtggttcttgatggcggccttgcggtaggccttcttgaggtcgtc 193
Query: 1592 ctgggacgccgacttgggcaccccgaggatctcatagtacttggtgttgtcgctcttctt 1651
||||||||| ||||||||| || |||||||| ||||| ||| |||||||||||||
Sbjct: 192 ctgggacgcgtccttgggcacgcccaggatctcgtagtagcgcgtgctgtcgctcttctt 133
Query: 1652 cggcg---cgcgcccgaacatcttgcctt 1677
||||| |||| |||||||||| |||||
Sbjct: 132 cggcggcccgcggccgaacatctcgcctt 104
>gb|CA002177.1|CA002177 HS06L24r HS Hordeum vulgare subsp. vulgare cDNA clone HS06L24
5-PRIME, mRNA sequence
Length = 595
Score = 283 bits (143), Expect = 9e-075
Identities = 238/269 (88%), Gaps = 3/269 (1%)
Strand = Plus / Minus
Query: 1412 tccaccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacg 1471
||||||||| |||||||| ||||| |||||||| ||||||||||||||||| ||||| ||
Sbjct: 372 tccaccacctcccattccctccttgagggcatcctcaccatactgatcatagatctctcg 313
Query: 1472 tttctctggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtc 1531
||||| ||||||||||| |||||||| || || || |||||||||||||||||||||||
Sbjct: 312 cttctcaggatcactcaagacctcataagcctgagctagctccttgaacttctcggggtc 253
Query: 1532 accgcccttgtcggggtggttcttgatagcggccttgcggtaggccttcttgaggtcgtc 1591
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 252 gccgcccttgtcggggtggttcttgatggcggccttgcggtaggccttcttgaggtcgtc 193
Query: 1592 ctgggacgccgacttgggcaccccgaggatctcatagtacttggtgttgtcgctcttctt 1651
||||||||| ||||||||| || |||||||| ||||| ||| |||||||||||||
Sbjct: 192 ctgggacgcgtccttgggcacgcccaggatctcgtagtagcgcgtgctgtcgctcttctt 133
Query: 1652 cggcg---cgcgcccgaacatcttgcctt 1677
||||| |||| |||||||||| |||||
Sbjct: 132 cggcggcccgcggccgaacatctcgcctt 104
Score = 38.2 bits (19), Expect = 0.94
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 1335 cccctgctgcttccaccacctcc 1357
||||||||||| |||||||||||
Sbjct: 452 cccctgctgctgccaccacctcc 430
>gb|CA003209.1|CA003209 HS09L24r HS Hordeum vulgare subsp. vulgare cDNA clone HS09L24
5-PRIME, mRNA sequence
Length = 565
Score = 283 bits (143), Expect = 9e-075
Identities = 238/269 (88%), Gaps = 3/269 (1%)
Strand = Plus / Minus
Query: 1412 tccaccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacg 1471
||||||||| |||||||| ||||| |||||||| ||||||||||||||||| ||||| ||
Sbjct: 357 tccaccacctcccattccctccttgagggcatcctcaccatactgatcatagatctctcg 298
Query: 1472 tttctctggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtc 1531
||||| ||||||||||| |||||||| || || || |||||||||||||||||||||||
Sbjct: 297 cttctcaggatcactcaagacctcataagcctgagctagctccttgaacttctcggggtc 238
Query: 1532 accgcccttgtcggggtggttcttgatagcggccttgcggtaggccttcttgaggtcgtc 1591
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 237 gccgcccttgtcggggtggttcttgatggcggccttgcggtaggccttcttgaggtcgtc 178
Query: 1592 ctgggacgccgacttgggcaccccgaggatctcatagtacttggtgttgtcgctcttctt 1651
||||||||| ||||||||| || |||||||| ||||| ||| |||||||||||||
Sbjct: 177 ctgggacgcgtccttgggcacgcccaggatctcgtagtagcgcgtgctgtcgctcttctt 118
Query: 1652 cggcg---cgcgcccgaacatcttgcctt 1677
||||| |||| |||||||||| |||||
Sbjct: 117 cggcggcccgcggccgaacatctcgcctt 89
>gb|CA007094.1|CA007094 HU06L13r HU Hordeum vulgare subsp. vulgare cDNA clone HU06L13
5-PRIME, mRNA sequence
Length = 480
Score = 283 bits (143), Expect = 9e-075
Identities = 238/269 (88%), Gaps = 3/269 (1%)
Strand = Plus / Minus
Query: 1412 tccaccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacg 1471
||||||||| |||||||| ||||| |||||||| ||||||||||||||||| ||||| ||
Sbjct: 360 tccaccacctcccattccctccttgagggcatcctcaccatactgatcatagatctctcg 301
Query: 1472 tttctctggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtc 1531
||||| ||||||||||| |||||||| || || || |||||||||||||||||||||||
Sbjct: 300 cttctcaggatcactcaagacctcataagcctgagctagctccttgaacttctcggggtc 241
Query: 1532 accgcccttgtcggggtggttcttgatagcggccttgcggtaggccttcttgaggtcgtc 1591
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 240 gccgcccttgtcggggtggttcttgatggcggccttgcggtaggccttcttgaggtcgtc 181
Query: 1592 ctgggacgccgacttgggcaccccgaggatctcatagtacttggtgttgtcgctcttctt 1651
||||||||| ||||||||| || |||||||| ||||| ||| |||||||||||||
Sbjct: 180 ctgggacgcgtccttgggcacgcccaggatctcgtagtagcgcgtgctgtcgctcttctt 121
Query: 1652 cggcg---cgcgcccgaacatcttgcctt 1677
||||| |||| |||||||||| |||||
Sbjct: 120 cggcggcccgcggccgaacatctcgcctt 92
Score = 38.2 bits (19), Expect = 0.94
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 1335 cccctgctgcttccaccacctcc 1357
||||||||||| |||||||||||
Sbjct: 440 cccctgctgctgccaccacctcc 418
>gb|CA013492.1|CA013492 HT08K04r HT Hordeum vulgare subsp. vulgare cDNA clone HT08K04
5-PRIME, mRNA sequence
Length = 626
Score = 283 bits (143), Expect = 9e-075
Identities = 238/269 (88%), Gaps = 3/269 (1%)
Strand = Plus / Minus
Query: 1412 tccaccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacg 1471
||||||||| |||||||| ||||| |||||||| ||||||||||||||||| ||||| ||
Sbjct: 326 tccaccacctcccattccctccttgagggcatcctcaccatactgatcatagatctctcg 267
Query: 1472 tttctctggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtc 1531
||||| ||||||||||| |||||||| || || || |||||||||||||||||||||||
Sbjct: 266 cttctcaggatcactcaagacctcataagcctgagctagctccttgaacttctcggggtc 207
Query: 1532 accgcccttgtcggggtggttcttgatagcggccttgcggtaggccttcttgaggtcgtc 1591
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 206 gccgcccttgtcggggtggttcttgatggcggccttgcggtaggccttcttgaggtcgtc 147
Query: 1592 ctgggacgccgacttgggcaccccgaggatctcatagtacttggtgttgtcgctcttctt 1651
||||||||| ||||||||| || |||||||| ||||| ||| |||||||||||||
Sbjct: 146 ctgggacgcgtccttgggcacgcccaggatctcgtagtagcgcgtgctgtcgctcttctt 87
Query: 1652 cggcg---cgcgcccgaacatcttgcctt 1677
||||| |||| |||||||||| |||||
Sbjct: 86 cggcggcccgcggccgaacatctcgcctt 58
Score = 38.2 bits (19), Expect = 0.94
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 1335 cccctgctgcttccaccacctcc 1357
||||||||||| |||||||||||
Sbjct: 406 cccctgctgctgccaccacctcc 384
>gb|CA017990.1|CA017990 HV07B06r HV Hordeum vulgare subsp. vulgare cDNA clone HV07B06
5-PRIME, mRNA sequence
Length = 529
Score = 283 bits (143), Expect = 9e-075
Identities = 238/269 (88%), Gaps = 3/269 (1%)
Strand = Plus / Minus
Query: 1412 tccaccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacg 1471
||||||||| |||||||| ||||| |||||||| ||||||||||||||||| ||||| ||
Sbjct: 372 tccaccacctcccattccctccttgagggcatcctcaccatactgatcatagatctctcg 313
Query: 1472 tttctctggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtc 1531
||||| ||||||||||| |||||||| || || || |||||||||||||||||||||||
Sbjct: 312 cttctcaggatcactcaagacctcataagcctgagctagctccttgaacttctcggggtc 253
Query: 1532 accgcccttgtcggggtggttcttgatagcggccttgcggtaggccttcttgaggtcgtc 1591
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 252 gccgcccttgtcggggtggttcttgatggcggccttgcggtaggccttcttgaggtcgtc 193
Query: 1592 ctgggacgccgacttgggcaccccgaggatctcatagtacttggtgttgtcgctcttctt 1651
||||||||| ||||||||| || |||||||| ||||| ||| |||||||||||||
Sbjct: 192 ctgggacgcgtccttgggcacgcccaggatctcgtagtagcgcgtgctgtcgctcttctt 133
Query: 1652 cggcg---cgcgcccgaacatcttgcctt 1677
||||| |||| |||||||||| |||||
Sbjct: 132 cggcggcccgcggccgaacatctcgcctt 104
Score = 38.2 bits (19), Expect = 0.94
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 1335 cccctgctgcttccaccacctcc 1357
||||||||||| |||||||||||
Sbjct: 452 cccctgctgctgccaccacctcc 430
>gb|CA023375.1|CA023375 HZ46A15r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ46A15
5-PRIME, mRNA sequence
Length = 392
Score = 283 bits (143), Expect = 9e-075
Identities = 238/269 (88%), Gaps = 3/269 (1%)
Strand = Plus / Minus
Query: 1412 tccaccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacg 1471
||||||||| |||||||| ||||| |||||||| ||||||||||||||||| ||||| ||
Sbjct: 357 tccaccacctcccattccctccttgagggcatcctcaccatactgatcatagatctctcg 298
Query: 1472 tttctctggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtc 1531
||||| ||||||||||| |||||||| || || || |||||||||||||||||||||||
Sbjct: 297 cttctcaggatcactcaagacctcataagcctgagctagctccttgaacttctcggggtc 238
Query: 1532 accgcccttgtcggggtggttcttgatagcggccttgcggtaggccttcttgaggtcgtc 1591
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 237 gccgcccttgtcggggtggttcttgatggcggccttgcggtaggccttcttgaggtcgtc 178
Query: 1592 ctgggacgccgacttgggcaccccgaggatctcatagtacttggtgttgtcgctcttctt 1651
||||||||| ||||||||| || |||||||| ||||| ||| |||||||||||||
Sbjct: 177 ctgggacgcgtccttgggcacgcccaggatctcgtagtagcgcgtgctgtcgctcttctt 118
Query: 1652 cggcg---cgcgcccgaacatcttgcctt 1677
||||| |||| |||||||||| |||||
Sbjct: 117 cggcggcccgcggccgaacatctcgcctt 89
>gb|CB859939.1|CB859939 HI12B03w HI Hordeum vulgare subsp. vulgare cDNA clone HI12B03
3-PRIME, mRNA sequence
Length = 563
Score = 283 bits (143), Expect = 9e-075
Identities = 288/333 (86%), Gaps = 15/333 (4%)
Strand = Plus / Plus
Query: 408 gcttactgttgcgcgcactgcactctctgggctccgcc---cggcatctcgtcgtcctcc 464
|||||||||||||||||||||||||||||||| ||||| ||||||||||||||| |||
Sbjct: 217 gcttactgttgcgcgcactgcactctctgggcaccgcctcccggcatctcgtcgtcgtcc 276
Query: 465 tcgt---acgcctcctgggcagcg---tgagcttgcttcctgcgcatctcttcctcgatg 518
|||| |||||||||| ||||| || |||| ||| |||||||| ||||| |||
Sbjct: 277 tcgtcgtacgcctcctgagcagcagcatgggctt---tccgacgcatctcctcctccatg 333
Query: 519 ttgttcacatcatgcatagtcgtctcctcgcattcatctatctccatgtctgtcagcttg 578
||| ||||||||||| |||||||||||||||||||| | ||||||||| |||||||||
Sbjct: 334 ttg---acatcatgcatcgtcgtctcctcgcattcatcaagctccatgtcagtcagcttg 390
Query: 579 gatgaaggccttggtggaagtactgtctcgagagccttgcactgctctggtgccagcgag 638
|||| |||| |||||||||| || | |||||||||||||||||| || |||||||| |||
Sbjct: 391 gatgcaggctttggtggaagaacggcctcgagagccttgcactgatccggtgccagagag 450
Query: 639 tcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaa 698
|||||||||||||| |||||||| ||||| ||||| |||||||||||||||||||||||
Sbjct: 451 tcggggaactccactgtgaaatggatgtagagcttgcccttcatgaaaggcctctggtac 510
Query: 699 atcggcatcccctcatcgtttattgccttgaat 731
|||||||| ||||| ||| | ||||||||||||
Sbjct: 511 atcggcattccctcgtcgctgattgccttgaat 543
>gb|AJ462891.1|AJ462891 AJ462891 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200078A08F1, mRNA sequence
Length = 420
Score = 280 bits (141), Expect = 1e-073
Identities = 314/367 (85%), Gaps = 16/367 (4%)
Strand = Plus / Minus
Query: 408 gcttactgttgcgcgcactgcactctctgggctccgcc---cggcatctcgtcgtcctcc 464
|||||||||||||||||||||||||||||||| ||||| ||||||||||||||| |||
Sbjct: 360 gcttactgttgcgcgcactgcactctctgggcaccgcctcccggcatctcgtcgtcgtcc 301
Query: 465 tcgt---acgcctcctgggcagcg---tgagcttgcttcctgcgcatctcttcctcgatg 518
|||| |||||||||| ||||| || |||| ||| |||||||| ||||| |||
Sbjct: 300 tcgtcgtacgcctcctgagcagcagcatgggctt---tccgacgcatctcctcctccatg 244
Query: 519 ttgttcacatcatgcatagtcgtctcctcgcattcatctatctccatgtctgtcagcttg 578
||| ||||||||||| ||||||||||||||||| || | ||||||||| |||||||||
Sbjct: 243 ttg---acatcatgcatcgtcgtctcctcgcattcgtcaagctccatgtcagtcagcttg 187
Query: 579 gatgaaggccttggtggaagtactgtctcgagagccttgcactgctctggtgccagcgag 638
|||| |||| |||||||||| || | |||||||||||||||||| || |||||||| |||
Sbjct: 186 gatgcaggctttggtggaagaacggcctcgagagccttgcactgatccggtgccagagag 127
Query: 639 tcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaa 698
|||||||||||||| |||||||| ||||| ||||| |||||||||||||||||||||||
Sbjct: 126 tcggggaactccactgtgaaatggatgtagagcttgcccttcatgaaaggcctctggtac 67
Query: 699 atcggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcaccaggg 758
|||||||| ||||| ||| | |||||||||||| ||||| || ||||||||||||||
Sbjct: 66 atcggcattccctcgtcgctgattgccttgaatgaatcaggctt-tcaacttcaccaggg 8
Query: 759 tctgatt 765
| |||||
Sbjct: 7 tttgatt 1
>gb|BU983194.1|BU983194 HA28N18r HA Hordeum vulgare subsp. vulgare cDNA clone HA28N18
5-PRIME, mRNA sequence
Length = 590
Score = 280 bits (141), Expect = 1e-073
Identities = 219/245 (89%)
Strand = Plus / Minus
Query: 1412 tccaccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacg 1471
||||||||| |||||||| ||||| |||||||| ||||||||||||||||| ||||| ||
Sbjct: 263 tccaccacctcccattccctccttgagggcatcctcaccatactgatcatagatctctcg 204
Query: 1472 tttctctggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtc 1531
||||| ||||||||||| |||||||| || || || ||||||||||||||||||||||
Sbjct: 203 cttctcaggatcactcaagacctcataagcctgagctagctccttgaacttctcggggta 144
Query: 1532 accgcccttgtcggggtggttcttgatagcggccttgcggtaggccttcttgaggtcgtc 1591
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 143 accgcccttgtcggggtggttcttgatggcggccttgcggtaggccttcttgaggtcgtc 84
Query: 1592 ctgggacgccgacttgggcaccccgaggatctcatagtacttggtgttgtcgctcttctt 1651
||||||||| ||||||||| || |||||||| ||||| ||| |||||||||||||
Sbjct: 83 ctgggacgcgtccttgggcacgcccaggatctcgtagtagcgcgtgctgtcgctcttctt 24
Query: 1652 cggcg 1656
|||||
Sbjct: 23 cggcg 19
Score = 48.1 bits (24), Expect = 0.001
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 1088 gcactcgttgcaaggctgctgcatctgctgtatcat 1123
|||||| ||||| ||||||||||| |||||||||||
Sbjct: 590 gcactcattgcagggctgctgcatttgctgtatcat 555
Score = 38.2 bits (19), Expect = 0.94
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 1335 cccctgctgcttccaccacctcc 1357
||||||||||| |||||||||||
Sbjct: 343 cccctgctgctgccaccacctcc 321
>gb|BI955028.1|BI955028 HVSMEm0020O14f Hordeum vulgare green seedling EST library HVcDNA0014
(Blumeria infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEm0020O14f, mRNA sequence
Length = 686
Score = 276 bits (139), Expect = 2e-072
Identities = 237/269 (88%), Gaps = 3/269 (1%)
Strand = Plus / Minus
Query: 1412 tccaccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacg 1471
||||||||| |||||||| || || |||||||| ||||||||||||||||| ||||| ||
Sbjct: 357 tccaccacctcccattccctcgttgagggcatcctcaccatactgatcatagatctctcg 298
Query: 1472 tttctctggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtc 1531
||||| ||||||||||| |||||||| || || || |||||||||||||||||||||||
Sbjct: 297 cttctcaggatcactcaagacctcataagcctgagctagctccttgaacttctcggggtc 238
Query: 1532 accgcccttgtcggggtggttcttgatagcggccttgcggtaggccttcttgaggtcgtc 1591
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 237 gccgcccttgtcggggtggttcttgatggcggccttgcggtaggccttcttgaggtcgtc 178
Query: 1592 ctgggacgccgacttgggcaccccgaggatctcatagtacttggtgttgtcgctcttctt 1651
|||| ||||| ||||||||| || |||||||| ||||| ||| |||||||||||||
Sbjct: 177 ctggcacgcccccttgggcacgcccaggatctcgtagtagcgcgtgctgtcgctcttctt 118
Query: 1652 cggcg---cgcgcccgaacatcttgcctt 1677
||||| |||| |||||||||| |||||
Sbjct: 117 cggcggcccgcggccgaacatctcgcctt 89
>gb|CA017133.1|CA017133 HV14M06u HV Hordeum vulgare subsp. vulgare cDNA clone HV14M06
3-PRIME, mRNA sequence
Length = 554
Score = 276 bits (139), Expect = 2e-072
Identities = 287/333 (86%), Gaps = 15/333 (4%)
Strand = Plus / Plus
Query: 408 gcttactgttgcgcgcactgcactctctgggctccgcc---cggcatctcgtcgtcctcc 464
|||||||||||||||||||||||||| ||||| ||||| ||||||||||||||| |||
Sbjct: 217 gcttactgttgcgcgcactgcactctttgggcaccgcctcccggcatctcgtcgtcgtcc 276
Query: 465 tcgt---acgcctcctgggcagcg---tgagcttgcttcctgcgcatctcttcctcgatg 518
|||| |||||||||| ||||| || |||| ||| |||||||| ||||| |||
Sbjct: 277 tcgtcgtacgcctcctgagcagcagcatgggctt---tccgacgcatctcctcctccatg 333
Query: 519 ttgttcacatcatgcatagtcgtctcctcgcattcatctatctccatgtctgtcagcttg 578
||| ||||||||||| |||||||||||||||||||| | ||||||||| |||||||||
Sbjct: 334 ttg---acatcatgcatcgtcgtctcctcgcattcatcaagctccatgtcagtcagcttg 390
Query: 579 gatgaaggccttggtggaagtactgtctcgagagccttgcactgctctggtgccagcgag 638
|||| |||| |||||||||| || | |||||||||||||||||| || |||||||| |||
Sbjct: 391 gatgcaggctttggtggaagaacggcctcgagagccttgcactgatccggtgccagagag 450
Query: 639 tcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaa 698
|||||||||||||| |||||||| ||||| ||||| |||||||||||||||||||||||
Sbjct: 451 tcggggaactccactgtgaaatggatgtagagcttgcccttcatgaaaggcctctggtac 510
Query: 699 atcggcatcccctcatcgtttattgccttgaat 731
|||||||| ||||| ||| | ||||||||||||
Sbjct: 511 atcggcattccctcgtcgctgattgccttgaat 543
>gb|BQ754405.1|BQ754405 EBca01_SQ003_N18_R carpel, pre-anthesis, no treatment, cv Optic,
EBca01 Hordeum vulgare subsp. vulgare cDNA clone
EBca01_SQ003_N18 5', mRNA sequence
Length = 393
Score = 272 bits (137), Expect = 4e-071
Identities = 218/245 (88%)
Strand = Plus / Minus
Query: 1412 tccaccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacg 1471
||||||||| |||||||| || || |||||||| ||||||||||||||||| ||||| ||
Sbjct: 357 tccaccacctcccattccctctttgagggcatcctcaccatactgatcatagatctctcg 298
Query: 1472 tttctctggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtc 1531
||||| ||||||||||| || ||||| ||||| || |||||||||||||||||||||||
Sbjct: 297 cttctcaggatcactcaagacttcataagcttgagctagctccttgaacttctcggggtc 238
Query: 1532 accgcccttgtcggggtggttcttgatagcggccttgcggtaggccttcttgaggtcgtc 1591
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 237 gccgcccttgtcggggtggttcttgatggcggccttgcggtaggccttcttgaggtcgtc 178
Query: 1592 ctgggacgccgacttgggcaccccgaggatctcatagtacttggtgttgtcgctcttctt 1651
||||||||| ||||||||| || |||||||| ||||| ||| |||||||||||||
Sbjct: 177 ctgggacgcgtccttgggcacgcccaggatctcgtagtagcgcgtgctgtcgctcttctt 118
Query: 1652 cggcg 1656
|||||
Sbjct: 117 cggcg 113
>gb|BI947601.1|BI947601 HVSMEl0006A21f Hordeum vulgare spike EST library HVcDNA0012 (Fusarium
infected) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEl0006A21f, mRNA sequence
Length = 1038
Score = 270 bits (136), Expect = 1e-070
Identities = 197/216 (91%), Gaps = 1/216 (0%)
Strand = Plus / Minus
Query: 1419 ccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttctct 1478
||||||||||||||||| || |||||||| ||||||| |||||| |||||||| |||||
Sbjct: 216 ccacccattccttccttgagagcatcttcgccatacttatcatagatctcacgcttctca 157
Query: 1479 ggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccgccc 1538
|| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 156 gggtcactcaaaacctcataggcttgtgccagctccttgaacttctcggggtcaccgccc 97
Query: 1539 ttgtcggggtggttcttgatagcggccttgcggta-ggccttcttgaggtcgtcctggga 1597
|||||||||||||||||||| |||||||||||| | |||||||||||||||||||||||
Sbjct: 96 ttgtcggggtggttcttgatggcggccttgcggcacggccttcttgaggtcgtcctgggc 37
Query: 1598 cgccgacttgggcaccccgaggatctcatagtactt 1633
|| ||||||||||||||||| ||| ||||||||
Sbjct: 36 ggcgtccttgggcaccccgaggacctcgtagtactt 1
>gb|BQ765166.1|BQ765166 EBro03_SQ006_N12_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ006_N12 5', mRNA sequence
Length = 297
Score = 268 bits (135), Expect = 6e-070
Identities = 198/219 (90%)
Strand = Plus / Minus
Query: 1412 tccaccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacg 1471
||||||||| |||||||| ||||| |||||||| ||||||||||||||||| ||||| ||
Sbjct: 224 tccaccacctcccattccctccttgagggcatcctcaccatactgatcatagatctctcg 165
Query: 1472 tttctctggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtc 1531
||||| ||||||||||| |||||||| || || || |||||||||||||||||||||||
Sbjct: 164 cttctcaggatcactcaagacctcataagcctgagctagctccttgaacttctcggggtc 105
Query: 1532 accgcccttgtcggggtggttcttgatagcggccttgcggtaggccttcttgaggtcgtc 1591
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 104 gccgcccttgtcggggtggttcttgatggcggccttgcggtaggccttcttgaggtcgtc 45
Query: 1592 ctgggacgccgacttgggcaccccgaggatctcatagta 1630
||||||||| ||||||||| || |||||||| |||||
Sbjct: 44 ctgggacgcgtccttgggcacgcccaggatctcgtagta 6
>gb|BF625733.2|BF625733 HVSMEa0013G20f Hordeum vulgare seedling shoot EST library HVcDNA0001
(Cold stress) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEa0013G20f, mRNA sequence
Length = 517
Score = 266 bits (134), Expect = 2e-069
Identities = 224/254 (88%)
Strand = Plus / Minus
Query: 1419 ccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttctct 1478
||||||||||||||||| || ||||| || ||| ||| |||||| |||||||| || ||
Sbjct: 375 ccacccattccttccttgagagcatcgtcgccagacttatcatagatctcacggttttca 316
Query: 1479 ggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccgccc 1538
|| |||||||||||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 315 gggtcactcaaaacctcataggcttgtgccagctccttgaacttatcggggtcaccgccc 256
Query: 1539 ttgtcggggtggttcttgatagcggccttgcggtaggccttcttgaggtcgtcctgggac 1598
||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 255 ttgtcagggtggttcttgatgacggccctgcggtaggccttcttgaggtcgtcctgggcg 196
Query: 1599 gccgacttgggcaccccgaggatctcatagtacttggtgttgtcgctcttcttcggcgcg 1658
|| |||||||||||||||| ||| ||| |||||||| ||||||||||||| || |||
Sbjct: 195 gcgtccttgggcaccccgagggcctcgtagaacttggtggtgtcgctcttcttgggggcg 136
Query: 1659 cgcccgaacatctt 1672
|| |||||||||||
Sbjct: 135 cgaccgaacatctt 122
Score = 46.1 bits (23), Expect = 0.004
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 1373 aaaaaatgatgagaaaatgtcaaatggatca 1403
|||||||||| |||||| |||||||||||||
Sbjct: 424 aaaaaatgataagaaaaggtcaaatggatca 394
>gb|BF616622.2|BF616622 HVSMEc0010N09f Hordeum vulgare seedling shoot EST library HVcDNA0003
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEc0010N09f, mRNA sequence
Length = 800
Score = 264 bits (133), Expect = 9e-069
Identities = 228/259 (88%), Gaps = 3/259 (1%)
Strand = Plus / Minus
Query: 1422 cccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttctctgga 1481
|||||||| || || |||||||| ||||||||||||||||| ||||| || ||||| |||
Sbjct: 347 cccattccatctttgagggcatcctcaccatactgatcatagatctctcgcttctcagga 288
Query: 1482 tcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccgcccttg 1541
|||||||| |||||||| || || || ||||||||||||||||||||||| |||||||||
Sbjct: 287 tcactcaagacctcataagcctgagctagctccttgaacttctcggggtcgccgcccttg 228
Query: 1542 tcggggtggttcttgatagcggccttgcggtaggccttcttgaggtcgtcctgggacgcc 1601
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 tcggggtggttcttgatggcggccttgcggtaggccttcttgaggtcgtcctgggacgcg 168
Query: 1602 gacttgggcaccccgaggatctcatagtacttggtgttgtcgctcttcttcggcg---cg 1658
||||||||| || |||||||| ||||| ||| |||||||||||||||||| ||
Sbjct: 167 tccttgggcacgcccaggatctcgtagtagcgcgtgctgtcgctcttcttcggcggcccg 108
Query: 1659 cgcccgaacatcttgcctt 1677
|| |||||||||| |||||
Sbjct: 107 cggccgaacatctcgcctt 89
>gb|AJ462890.1|AJ462890 AJ462890 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200012B01F1, mRNA sequence
Length = 360
Score = 262 bits (132), Expect = 3e-068
Identities = 271/314 (86%), Gaps = 15/314 (4%)
Strand = Plus / Minus
Query: 408 gcttactgttgcgcgcactgcactctctgggctccgcc---cggcatctcgtcgtcctcc 464
|||||||||||||||||||||||||||||||| ||||| ||||||||||||||| |||
Sbjct: 308 gcttactgttgcgcgcactgcactctctgggcaccgcctcccggcatctcgtcgtcgtcc 249
Query: 465 tcgt---acgcctcctgggcagcg---tgagcttgcttcctgcgcatctcttcctcgatg 518
|||| |||||||||| ||||| || |||| ||| |||||||| ||||| |||
Sbjct: 248 tcgtcgtacgcctcctgagcagcagcatgggctt---tccgacgcatctcctcctccatg 192
Query: 519 ttgttcacatcatgcatagtcgtctcctcgcattcatctatctccatgtctgtcagcttg 578
||| ||||||||||| ||||||||||||||||| || | ||||||||| |||||||||
Sbjct: 191 ttg---acatcatgcatcgtcgtctcctcgcattcgtcaagctccatgtcagtcagcttg 135
Query: 579 gatgaaggccttggtggaagtactgtctcgagagccttgcactgctctggtgccagcgag 638
|||| |||| |||||||||| || | |||||||||||||||||| || |||||||| |||
Sbjct: 134 gatgcaggctttggtggaagaacggcctcgagagccttgcactgatccggtgccagagag 75
Query: 639 tcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaa 698
|||||||||||||| |||||||| ||||| ||||| |||||||||||||||||||||||
Sbjct: 74 tcggggaactccactgtgaaatggatgtagagcttgcccttcatgaaaggcctctggtac 15
Query: 699 atcggcatcccctc 712
|||||||| |||||
Sbjct: 14 atcggcattccctc 1
>gb|BE559324.1|BE559324 HV_CEb0024B22f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0024B22f, mRNA sequence
Length = 938
Score = 258 bits (130), Expect = 5e-067
Identities = 234/268 (87%), Gaps = 3/268 (1%)
Strand = Plus / Minus
Query: 1412 tccaccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacg 1471
|||||| || |||||||| ||||| |||||||| ||||||||||||||||| ||||| ||
Sbjct: 356 tccaccgcctcccattccctccttgagggcatcctcaccatactgatcatagatctctcg 297
Query: 1472 tttctctggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtc 1531
||||| |||||||||| |||||||| || || || || ||||||||||||||||||||
Sbjct: 296 cttctcaggatcactcaggacctcataagcctgagctagttccttgaacttctcggggtc 237
Query: 1532 accgcccttgtcggggtggttcttgatagcggccttgcggtaggccttcttgaggtcgtc 1591
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 236 gccgcccttgtcggggtggttcttgatggcggccttgcggtaggccttcttgaggtcgtc 177
Query: 1592 ctgggacgccgacttgggcaccccgaggatctcatagtacttggtgttgtcgctcttctt 1651
||||||||| ||||||||| || |||||||| ||||| ||| |||||||||||||
Sbjct: 176 ctgggacgcgtccttgggcacgcccaggatctcgtagtagcgcgtgctgtcgctcttctt 117
Query: 1652 cggcg---cgcgcccgaacatcttgcct 1676
||||| |||| |||||||||| ||||
Sbjct: 116 cggcggcccgcggccgaacatctcgcct 89
Score = 38.2 bits (19), Expect = 0.94
Identities = 35/41 (85%)
Strand = Plus / Minus
Query: 1083 cccttgcactcgttgcaaggctgctgcatctgctgtatcat 1123
||| ||||||| ||||| ||||||||||| |||| |||||
Sbjct: 689 cccntgcactcattgcagggctgctgcattngctgaatcat 649
Score = 38.2 bits (19), Expect = 0.94
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 1335 cccctgctgcttccaccacctcc 1357
||||||||||| |||||||||||
Sbjct: 436 cccctgctgctgccaccacctcc 414
>gb|BF265760.2|BF265760 HV_CEa0013E07f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0013E07f, mRNA sequence
Length = 757
Score = 258 bits (130), Expect = 5e-067
Identities = 234/268 (87%), Gaps = 3/268 (1%)
Strand = Plus / Minus
Query: 1412 tccaccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacg 1471
|||||| || |||||||| ||||| |||||||| ||||||||||||||||| ||||| ||
Sbjct: 362 tccaccgcctcccattccctccttgagggcatcctcaccatactgatcatagatctctcg 303
Query: 1472 tttctctggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtc 1531
||||| |||||||||| |||||||| || || || || ||||||||||||||||||||
Sbjct: 302 cttctcaggatcactcaggacctcataagcctgagctagttccttgaacttctcggggtc 243
Query: 1532 accgcccttgtcggggtggttcttgatagcggccttgcggtaggccttcttgaggtcgtc 1591
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 242 gccgcccttgtcggggtggttcttgatggcggccttgcggtaggccttcttgaggtcgtc 183
Query: 1592 ctgggacgccgacttgggcaccccgaggatctcatagtacttggtgttgtcgctcttctt 1651
||||||||| ||||||||| || |||||||| ||||| ||| |||||||||||||
Sbjct: 182 ctgggacgcgtccttgggcacgcccaggatctcgtagtagcgcgtgctgtcgctcttctt 123
Query: 1652 cggcg---cgcgcccgaacatcttgcct 1676
||||| |||| |||||||||| ||||
Sbjct: 122 cggcggcccgcggccgaacatctcgcct 95
Score = 38.2 bits (19), Expect = 0.94
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 1335 cccctgctgcttccaccacctcc 1357
||||||||||| |||||||||||
Sbjct: 442 cccctgctgctgccaccacctcc 420
>gb|BF265966.2|BF265966 HV_CEa0013M21f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0013M21f, mRNA sequence
Length = 749
Score = 258 bits (130), Expect = 5e-067
Identities = 234/268 (87%), Gaps = 3/268 (1%)
Strand = Plus / Minus
Query: 1412 tccaccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacg 1471
|||||| || |||||||| ||||| |||||||| ||||||||||||||||| ||||| ||
Sbjct: 362 tccaccgcctcccattccctccttgagggcatcctcaccatactgatcatagatctctcg 303
Query: 1472 tttctctggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtc 1531
||||| |||||||||| |||||||| || || || || ||||||||||||||||||||
Sbjct: 302 cttctcaggatcactcaggacctcataagcctgagctagttccttgaacttctcggggtc 243
Query: 1532 accgcccttgtcggggtggttcttgatagcggccttgcggtaggccttcttgaggtcgtc 1591
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 242 gccgcccttgtcggggtggttcttgatggcggccttgcggtaggccttcttgaggtcgtc 183
Query: 1592 ctgggacgccgacttgggcaccccgaggatctcatagtacttggtgttgtcgctcttctt 1651
||||||||| ||||||||| || |||||||| ||||| ||| |||||||||||||
Sbjct: 182 ctgggacgcgtccttgggcacgcccaggatctcgtagtagcgcgtgctgtcgctcttctt 123
Query: 1652 cggcg---cgcgcccgaacatcttgcct 1676
||||| |||| |||||||||| ||||
Sbjct: 122 cggcggcccgcggccgaacatctcgcct 95
>gb|AV924641.1|AV924641 AV924641 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp. vulgare
cDNA clone basd16f23 5', mRNA sequence
Length = 512
Score = 258 bits (130), Expect = 5e-067
Identities = 234/268 (87%), Gaps = 3/268 (1%)
Strand = Plus / Minus
Query: 1412 tccaccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacg 1471
|||||| || |||||||| ||||| |||||||| ||||||||||||||||| ||||| ||
Sbjct: 288 tccaccgcctcccattccctccttgagggcatcctcaccatactgatcatagatctctcg 229
Query: 1472 tttctctggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtc 1531
||||| |||||||||| |||||||| || || || || ||||||||||||||||||||
Sbjct: 228 cttctcaggatcactcaggacctcataagcctgagctagttccttgaacttctcggggtc 169
Query: 1532 accgcccttgtcggggtggttcttgatagcggccttgcggtaggccttcttgaggtcgtc 1591
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 168 gccgcccttgtcggggtggttcttgatggcggccttgcggtaggccttcttgaggtcgtc 109
Query: 1592 ctgggacgccgacttgggcaccccgaggatctcatagtacttggtgttgtcgctcttctt 1651
||||||||| ||||||||| || |||||||| ||||| ||| |||||||||||||
Sbjct: 108 ctgggacgcgtccttgggcacgcccaggatctcgtagtagcgcgtgctgtcgctcttctt 49
Query: 1652 cggcg---cgcgcccgaacatcttgcct 1676
||||| |||| |||||||||| ||||
Sbjct: 48 cggcggcccgcggccgaacatctcgcct 21
Score = 38.2 bits (19), Expect = 0.94
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 1335 cccctgctgcttccaccacctcc 1357
||||||||||| |||||||||||
Sbjct: 368 cccctgctgctgccaccacctcc 346
>gb|AV926309.1|AV926309 AV926309 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp. vulgare
cDNA clone basd18o07 5', mRNA sequence
Length = 619
Score = 258 bits (130), Expect = 5e-067
Identities = 234/268 (87%), Gaps = 3/268 (1%)
Strand = Plus / Minus
Query: 1412 tccaccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacg 1471
|||||| || |||||||| ||||| |||||||| ||||||||||||||||| ||||| ||
Sbjct: 373 tccaccgcctcccattccctccttgagggcatcctcaccatactgatcatagatctctcg 314
Query: 1472 tttctctggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtc 1531
||||| |||||||||| |||||||| || || || || ||||||||||||||||||||
Sbjct: 313 cttctcaggatcactcaggacctcataagcctgagctagttccttgaacttctcggggtc 254
Query: 1532 accgcccttgtcggggtggttcttgatagcggccttgcggtaggccttcttgaggtcgtc 1591
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 253 gccgcccttgtcggggtggttcttgatggcggccttgcggtaggccttcttgaggtcgtc 194
Query: 1592 ctgggacgccgacttgggcaccccgaggatctcatagtacttggtgttgtcgctcttctt 1651
||||||||| ||||||||| || |||||||| ||||| ||| |||||||||||||
Sbjct: 193 ctgggacgcgtccttgggcacgcccaggatctcgtagtagcgcgtgctgtcgctcttctt 134
Query: 1652 cggcg---cgcgcccgaacatcttgcct 1676
||||| |||| |||||||||| ||||
Sbjct: 133 cggcggcccgcggccgaacatctcgcct 106
Score = 38.2 bits (19), Expect = 0.94
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 1335 cccctgctgcttccaccacctcc 1357
||||||||||| |||||||||||
Sbjct: 453 cccctgctgctgccaccacctcc 431
>gb|AV932975.1|AV932975 AV932975 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal4o07 5', mRNA sequence
Length = 631
Score = 258 bits (130), Expect = 5e-067
Identities = 234/268 (87%), Gaps = 3/268 (1%)
Strand = Plus / Minus
Query: 1412 tccaccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacg 1471
|||||| || |||||||| ||||| |||||||| ||||||||||||||||| ||||| ||
Sbjct: 373 tccaccgcctcccattccctccttgagggcatcctcaccatactgatcatagatctctcg 314
Query: 1472 tttctctggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtc 1531
||||| |||||||||| |||||||| || || || || ||||||||||||||||||||
Sbjct: 313 cttctcaggatcactcaggacctcataagcctgagctagttccttgaacttctcggggtc 254
Query: 1532 accgcccttgtcggggtggttcttgatagcggccttgcggtaggccttcttgaggtcgtc 1591
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 253 gccgcccttgtcggggtggttcttgatggcggccttgcggtaggccttcttgaggtcgtc 194
Query: 1592 ctgggacgccgacttgggcaccccgaggatctcatagtacttggtgttgtcgctcttctt 1651
||||||||| ||||||||| || |||||||| ||||| ||| |||||||||||||
Sbjct: 193 ctgggacgcgtccttgggcacgcccaggatctcgtagtagcgcgtgctgtcgctcttctt 134
Query: 1652 cggcg---cgcgcccgaacatcttgcct 1676
||||| |||| |||||||||| ||||
Sbjct: 133 cggcggcccgcggccgaacatctcgcct 106
Score = 38.2 bits (19), Expect = 0.94
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 1335 cccctgctgcttccaccacctcc 1357
||||||||||| |||||||||||
Sbjct: 453 cccctgctgctgccaccacctcc 431
>gb|CA000372.1|CA000372 HS08L13u HS Hordeum vulgare subsp. vulgare cDNA clone HS08L13
3-PRIME, mRNA sequence
Length = 522
Score = 258 bits (130), Expect = 5e-067
Identities = 266/308 (86%), Gaps = 15/308 (4%)
Strand = Plus / Plus
Query: 408 gcttactgttgcgcgcactgcactctctgggctccgcc---cggcatctcgtcgtcctcc 464
|||||||||||||||||||||||||| ||||| ||||| ||||||||||||||| |||
Sbjct: 221 gcttactgttgcgcgcactgcactctttgggcaccgcctcccggcatctcgtcgtcgtcc 280
Query: 465 tcgt---acgcctcctgggcagcg---tgagcttgcttcctgcgcatctcttcctcgatg 518
|||| |||||||||| ||||| || |||| ||| |||||||| ||||| |||
Sbjct: 281 tcgtcgtacgcctcctgagcagcagcatgggctt---tccgacgcatctcctcctccatg 337
Query: 519 ttgttcacatcatgcatagtcgtctcctcgcattcatctatctccatgtctgtcagcttg 578
||| ||||||||||| |||||||||||||||||||| | ||||||||| |||||||||
Sbjct: 338 ttg---acatcatgcatcgtcgtctcctcgcattcatcaagctccatgtcagtcagcttg 394
Query: 579 gatgaaggccttggtggaagtactgtctcgagagccttgcactgctctggtgccagcgag 638
|||| |||| |||||||||| || | |||||||||||||||||| || |||||||| |||
Sbjct: 395 gatgcaggctttggtggaagaacggcctcgagagccttgcactgatccggtgccagagag 454
Query: 639 tcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaa 698
|||||||||||||| |||||||| ||||| ||||| |||||||||||||||||||||||
Sbjct: 455 tcggggaactccactgtgaaatggatgtagagcttgcccttcatgaaaggcctctggtac 514
Query: 699 atcggcat 706
||||||||
Sbjct: 515 atcggcat 522
>gb|BJ547080.1|BJ547080 BJ547080 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal14i23 5', mRNA sequence
Length = 603
Score = 258 bits (130), Expect = 5e-067
Identities = 234/268 (87%), Gaps = 3/268 (1%)
Strand = Plus / Minus
Query: 1412 tccaccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacg 1471
|||||| || |||||||| ||||| |||||||| ||||||||||||||||| ||||| ||
Sbjct: 361 tccaccgcctcccattccctccttgagggcatcctcaccatactgatcatagatctctcg 302
Query: 1472 tttctctggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtc 1531
||||| |||||||||| |||||||| || || || || ||||||||||||||||||||
Sbjct: 301 cttctcaggatcactcaggacctcataagcctgagctagttccttgaacttctcggggtc 242
Query: 1532 accgcccttgtcggggtggttcttgatagcggccttgcggtaggccttcttgaggtcgtc 1591
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 241 gccgcccttgtcggggtggttcttgatggcggccttgcggtaggccttcttgaggtcgtc 182
Query: 1592 ctgggacgccgacttgggcaccccgaggatctcatagtacttggtgttgtcgctcttctt 1651
||||||||| ||||||||| || |||||||| ||||| ||| |||||||||||||
Sbjct: 181 ctgggacgcgtccttgggcacgcccaggatctcgtagtagcgcgtgctgtcgctcttctt 122
Query: 1652 cggcg---cgcgcccgaacatcttgcct 1676
||||| |||| |||||||||| ||||
Sbjct: 121 cggcggcccgcggccgaacatctcgcct 94
Score = 38.2 bits (19), Expect = 0.94
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 1335 cccctgctgcttccaccacctcc 1357
||||||||||| |||||||||||
Sbjct: 441 cccctgctgctgccaccacctcc 419
>gb|BJ547294.1|BJ547294 BJ547294 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal29p02 5', mRNA sequence
Length = 485
Score = 258 bits (130), Expect = 5e-067
Identities = 234/268 (87%), Gaps = 3/268 (1%)
Strand = Plus / Minus
Query: 1412 tccaccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacg 1471
|||||| || |||||||| ||||| |||||||| ||||||||||||||||| ||||| ||
Sbjct: 288 tccaccgcctcccattccctccttgagggcatcctcaccatactgatcatagatctctcg 229
Query: 1472 tttctctggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtc 1531
||||| |||||||||| |||||||| || || || || ||||||||||||||||||||
Sbjct: 228 cttctcaggatcactcaggacctcataagcctgagctagttccttgaacttctcggggtc 169
Query: 1532 accgcccttgtcggggtggttcttgatagcggccttgcggtaggccttcttgaggtcgtc 1591
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 168 gccgcccttgtcggggtggttcttgatggcggccttgcggtaggccttcttgaggtcgtc 109
Query: 1592 ctgggacgccgacttgggcaccccgaggatctcatagtacttggtgttgtcgctcttctt 1651
||||||||| ||||||||| || |||||||| ||||| ||| |||||||||||||
Sbjct: 108 ctgggacgcgtccttgggcacgcccaggatctcgtagtagcgcgtgctgtcgctcttctt 49
Query: 1652 cggcg---cgcgcccgaacatcttgcct 1676
||||| |||| |||||||||| ||||
Sbjct: 48 cggcggcccgcggccgaacatctcgcct 21
Score = 38.2 bits (19), Expect = 0.94
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 1335 cccctgctgcttccaccacctcc 1357
||||||||||| |||||||||||
Sbjct: 368 cccctgctgctgccaccacctcc 346
>gb|BJ547556.1|BJ547556 BJ547556 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal31m24 5', mRNA sequence
Length = 630
Score = 258 bits (130), Expect = 5e-067
Identities = 234/268 (87%), Gaps = 3/268 (1%)
Strand = Plus / Minus
Query: 1412 tccaccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacg 1471
|||||| || |||||||| ||||| |||||||| ||||||||||||||||| ||||| ||
Sbjct: 370 tccaccgcctcccattccctccttgagggcatcctcaccatactgatcatagatctctcg 311
Query: 1472 tttctctggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtc 1531
||||| |||||||||| |||||||| || || || || ||||||||||||||||||||
Sbjct: 310 cttctcaggatcactcaggacctcataagcctgagctagttccttgaacttctcggggtc 251
Query: 1532 accgcccttgtcggggtggttcttgatagcggccttgcggtaggccttcttgaggtcgtc 1591
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 250 gccgcccttgtcggggtggttcttgatggcggccttgcggtaggccttcttgaggtcgtc 191
Query: 1592 ctgggacgccgacttgggcaccccgaggatctcatagtacttggtgttgtcgctcttctt 1651
||||||||| ||||||||| || |||||||| ||||| ||| |||||||||||||
Sbjct: 190 ctgggacgcgtccttgggcacgcccaggatctcgtagtagcgcgtgctgtcgctcttctt 131
Query: 1652 cggcg---cgcgcccgaacatcttgcct 1676
||||| |||| |||||||||| ||||
Sbjct: 130 cggcggcccgcggccgaacatctcgcct 103
Score = 38.2 bits (19), Expect = 0.94
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 1335 cccctgctgcttccaccacctcc 1357
||||||||||| |||||||||||
Sbjct: 450 cccctgctgctgccaccacctcc 428
>gb|BG365672.1|BG365672 HVSMEi0003L05f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0003L05f, mRNA sequence
Length = 777
Score = 244 bits (123), Expect = 8e-063
Identities = 265/311 (85%), Gaps = 1/311 (0%)
Strand = Plus / Minus
Query: 745 caacttcaccagggtctg-atttgatgagaagctgcctgttgtccagatgtgtaagaaca 803
||||||||||||||| || |||| ||||| |||||||||||||||||||| || || |
Sbjct: 353 caacttcaccagggtttgcatttaatgagcagctgcctgttgtccagatgggtcaggccg 294
Query: 804 aattggaacccacatagtgcttcggtcagagacaaggtgtgctcatagaagagatcttca 863
| |||||||||||| || ||||| || ||||| | |||||||| |||||||||||| |||
Sbjct: 293 agttggaacccacaaagagcttcagtgagagatatggtgtgctgatagaagagatcatca 234
Query: 864 ccctttcttttgaacttggagtggtccttctgctggaggacgaatacaatgtctccagta 923
||||||| |||| | | ||| || ||||||||| ||| ||||||||||||||||||
Sbjct: 233 ccctttcgcgtgaaatccgggtgttctatctgctggacgacaaatacaatgtctccagta 174
Query: 924 acggtatcaggcgcttcatcagcttcaccagggaaggtgatcttctggctgtgttgcatt 983
|| | |||||||| | ||||||||| ||||||||||||||||||||| ||||||||||
Sbjct: 173 acagggtcaggcgcctgatcagcttccccagggaaggtgatcttctgggtgtgttgcatc 114
Query: 984 cccttctcaacatgaacctcaagaaccttcttctcctgaacgaccttctcacccttacac 1043
|||||||||||||||||||| | ||| |||||||| |||| |||||||||||||| ||
Sbjct: 113 cccttctcaacatgaacctccaaaactttcttctcgtgaagaaccttctcacccttgcag 54
Query: 1044 cctgggcagcg 1054
|||||||||||
Sbjct: 53 cctgggcagcg 43
>gb|BJ547588.1|BJ547588 BJ547588 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal32k04 5', mRNA sequence
Length = 587
Score = 238 bits (120), Expect = 5e-061
Identities = 189/212 (89%)
Strand = Plus / Minus
Query: 1412 tccaccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacg 1471
|||||| || |||||||| ||||| |||||||| ||||||||||||||||| ||||| ||
Sbjct: 328 tccaccgcctcccattccctccttgagggcatcctcaccatactgatcatagatctctcg 269
Query: 1472 tttctctggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtc 1531
||||| |||||||||| |||||||| || || || || ||||||||||||||||||||
Sbjct: 268 cttctcaggatcactcaggacctcataagcctgagctagttccttgaacttctcggggtc 209
Query: 1532 accgcccttgtcggggtggttcttgatagcggccttgcggtaggccttcttgaggtcgtc 1591
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 208 gccgcccttgtcggggtggttcttgatggcggccttgcggtaggccttcttgaggtcgtc 149
Query: 1592 ctgggacgccgacttgggcaccccgaggatct 1623
||||||||| ||||||||| || |||||||
Sbjct: 148 ctgggacgcgtccttgggcacgcccaggatct 117
Score = 38.2 bits (19), Expect = 0.94
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 1335 cccctgctgcttccaccacctcc 1357
||||||||||| |||||||||||
Sbjct: 408 cccctgctgctgccaccacctcc 386
>gb|AV915331.1|AV915331 AV915331 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags13o20 5', mRNA sequence
Length = 678
Score = 232 bits (117), Expect = 3e-059
Identities = 393/485 (81%)
Strand = Plus / Minus
Query: 632 cagcgagtcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcct 691
||||||||||||||| |||||||||| || ||||| ||||| ||||||||||| |||||
Sbjct: 510 cagcgagtcggggaaaaccaccgtgaagtggatgtagagcttgcccttcatgaagggcct 451
Query: 692 ctggtaaatcggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttc 751
|||||| || ||||| ||||| ||||| || ||||||||| ||||| || ||||||||
Sbjct: 450 ctggtacatgggcatgccctcgtcgttgatcgccttgaatgaatcaggcttgacaacttc 391
Query: 752 accagggtctgatttgatgagaagctgcctgttgtccagatgtgtaagaacaaattggaa 811
|| |||| || |||||||| ||||| ||| |||| ||| | || ||| |||||||
Sbjct: 390 cccggggttggacttgatgagcagctgtctgccatccaaatgagctaggacatattggaa 331
Query: 812 cccacatagtgcttcggtcagagacaaggtgtgctcatagaagagatcttcaccctttct 871
||||| || || || ||||| | || |||||||||||||||||| || ||| |||| |
Sbjct: 330 gccacagagggcctccgtcagggtcagggtgtgctcatagaagaggtcgtcagccttccg 271
Query: 872 tttgaacttggagtggtccttctgctggaggacgaatacaatgtctccagtaacggtatc 931
||||| |||| ||| |||||||||||||||||||| | ||||||||||| ||||||||
Sbjct: 270 cttgaatttggggtgctccttctgctggaggacgaagattatgtctccagtgacggtatc 211
Query: 932 aggcgcttcatcagcttcaccagggaaggtgatcttctggctgtgttgcattcccttctc 991
|||||||||||| || || |||||||||||||||||||| | || ||||| ||||||||
Sbjct: 210 aggcgcttcatctgcctcgccagggaaggtgatcttctgtccatgctgcatacccttctc 151
Query: 992 aacatgaacctcaagaaccttcttctcctgaacgaccttctcacccttacaccctgggca 1051
|| ||||| || || |||||||| ||||| |||||||||||||| ||| |||
Sbjct: 150 gaccaccacctccaggactttcttctcgtgaaccaccttctcacccttgcactgcccgca 91
Query: 1052 gcggtccttctcgttgatgctctccccagtccccttgcactcgttgcaaggctgctgcat 1111
|| ||||| || ||||| |||| ||| | ||| ||||||| ||||| |||||||||||
Sbjct: 90 acgatccttatcactgatggtctcaccacttcccctgcactcattgcagggctgctgcat 31
Query: 1112 ctgct 1116
||||
Sbjct: 30 ttgct 26
Score = 44.1 bits (22), Expect = 0.015
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 538 tcgtctcctcgcattcatctatctccatgtctgt 571
||||||||||||| || |||| ||||||||||||
Sbjct: 605 tcgtctcctcgcactcgtctagctccatgtctgt 572
>gb|AV932812.1|AV932812 AV932812 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal4d04 5', mRNA sequence
Length = 697
Score = 230 bits (116), Expect = 1e-058
Identities = 335/408 (82%)
Strand = Plus / Minus
Query: 632 cagcgagtcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcct 691
||||||||||||||| |||||||||| || ||||| ||||| ||||||||||| |||||
Sbjct: 471 cagcgagtcggggaaaaccaccgtgaagtggatgtagagcttgcccttcatgaagggcct 412
Query: 692 ctggtaaatcggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttc 751
|||||| || ||||| ||||| ||||| || ||||||||| ||||| || ||||||||
Sbjct: 411 ctggtacatgggcatgccctcgtcgttgatcgccttgaatgaatcaggcttgacaacttc 352
Query: 752 accagggtctgatttgatgagaagctgcctgttgtccagatgtgtaagaacaaattggaa 811
|| |||| || |||||||| ||||| ||| |||| ||| | || ||| |||||||
Sbjct: 351 cccggggttggacttgatgagcagctgtctgccatccaaatgagctaggacatattggaa 292
Query: 812 cccacatagtgcttcggtcagagacaaggtgtgctcatagaagagatcttcaccctttct 871
||||| || || || ||||| | || |||||||||||||||||| || ||| |||| |
Sbjct: 291 gccacagagggcctccgtcagggtcagggtgtgctcatagaagaggtcgtcagccttccg 232
Query: 872 tttgaacttggagtggtccttctgctggaggacgaatacaatgtctccagtaacggtatc 931
||||| |||| ||| |||||||||||||||||||| | ||||||||||| ||||||||
Sbjct: 231 cttgaatttggggtgctccttctgctggaggacgaagattatgtctccagtgacggtatc 172
Query: 932 aggcgcttcatcagcttcaccagggaaggtgatcttctggctgtgttgcattcccttctc 991
|||||||||||| || || |||||||||||||||||||| | || ||||| ||||||||
Sbjct: 171 aggcgcttcatctgcctcgccagggaaggtgatcttctgtccatgctgcatacccttctc 112
Query: 992 aacatgaacctcaagaaccttcttctcctgaacgaccttctcaccctt 1039
|| ||||| || || |||||||| ||||| ||||||||||||||
Sbjct: 111 gaccaccacctccaggactttcttctcgtgaaccaccttctcaccctt 64
Score = 36.2 bits (18), Expect = 3.7
Identities = 33/38 (86%)
Strand = Plus / Minus
Query: 441 ccgcccggcatctcgtcgtcctcctcgtacgcctcctg 478
||||||||||| || |||||||| || || ||||||||
Sbjct: 659 ccgcccggcatatcctcgtcctcgtcataggcctcctg 622
>gb|AV933573.1|AV933573 AV933573 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal7i04 5', mRNA sequence
Length = 629
Score = 230 bits (116), Expect = 1e-058
Identities = 335/408 (82%)
Strand = Plus / Minus
Query: 632 cagcgagtcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcct 691
||||||||||||||| |||||||||| || ||||| ||||| ||||||||||| |||||
Sbjct: 461 cagcgagtcggggaaaaccaccgtgaagtggatgtagagcttgcccttcatgaagggcct 402
Query: 692 ctggtaaatcggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttc 751
|||||| || ||||| ||||| ||||| || ||||||||| ||||| || ||||||||
Sbjct: 401 ctggtacatgggcatgccctcgtcgttgatcgccttgaatgaatcaggcttgacaacttc 342
Query: 752 accagggtctgatttgatgagaagctgcctgttgtccagatgtgtaagaacaaattggaa 811
|| |||| || |||||||| ||||| ||| |||| ||| | || ||| |||||||
Sbjct: 341 cccggggttggacttgatgagcagctgtctgccatccaaatgagctaggacatattggaa 282
Query: 812 cccacatagtgcttcggtcagagacaaggtgtgctcatagaagagatcttcaccctttct 871
||||| || || || ||||| | || |||||||||||||||||| || ||| |||| |
Sbjct: 281 gccacagagggcctccgtcagggtcagggtgtgctcatagaagaggtcgtcagccttccg 222
Query: 872 tttgaacttggagtggtccttctgctggaggacgaatacaatgtctccagtaacggtatc 931
||||| |||| ||| |||||||||||||||||||| | ||||||||||| ||||||||
Sbjct: 221 cttgaatttggggtgctccttctgctggaggacgaagattatgtctccagtgacggtatc 162
Query: 932 aggcgcttcatcagcttcaccagggaaggtgatcttctggctgtgttgcattcccttctc 991
|||||||||||| || || |||||||||||||||||||| | || ||||| ||||||||
Sbjct: 161 aggcgcttcatctgcctcgccagggaaggtgatcttctgtccatgctgcatacccttctc 102
Query: 992 aacatgaacctcaagaaccttcttctcctgaacgaccttctcaccctt 1039
|| ||||| || || |||||||| ||||| ||||||||||||||
Sbjct: 101 gaccaccacctccaggactttcttctcgtgaaccaccttctcaccctt 54
>gb|BJ471254.1|BJ471254 BJ471254 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal17h10 5', mRNA sequence
Length = 629
Score = 230 bits (116), Expect = 1e-058
Identities = 335/408 (82%)
Strand = Plus / Minus
Query: 632 cagcgagtcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcct 691
||||||||||||||| |||||||||| || ||||| ||||| ||||||||||| |||||
Sbjct: 461 cagcgagtcggggaaaaccaccgtgaagtggatgtagagcttgcccttcatgaagggcct 402
Query: 692 ctggtaaatcggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttc 751
|||||| || ||||| ||||| ||||| || ||||||||| ||||| || ||||||||
Sbjct: 401 ctggtacatgggcatgccctcgtcgttgatcgccttgaatgaatcaggcttgacaacttc 342
Query: 752 accagggtctgatttgatgagaagctgcctgttgtccagatgtgtaagaacaaattggaa 811
|| |||| || |||||||| ||||| ||| |||| ||| | || ||| |||||||
Sbjct: 341 cccggggttggacttgatgagcagctgtctgccatccaaatgagctaggacatattggaa 282
Query: 812 cccacatagtgcttcggtcagagacaaggtgtgctcatagaagagatcttcaccctttct 871
||||| || || || ||||| | || |||||||||||||||||| || ||| |||| |
Sbjct: 281 gccacagagggcctccgtcagggtcagggtgtgctcatagaagaggtcgtcagccttccg 222
Query: 872 tttgaacttggagtggtccttctgctggaggacgaatacaatgtctccagtaacggtatc 931
||||| |||| ||| |||||||||||||||||||| | ||||||||||| ||||||||
Sbjct: 221 cttgaatttggggtgctccttctgctggaggacgaagattatgtctccagtgacggtatc 162
Query: 932 aggcgcttcatcagcttcaccagggaaggtgatcttctggctgtgttgcattcccttctc 991
|||||||||||| || || |||||||||||||||||||| | || ||||| ||||||||
Sbjct: 161 aggcgcttcatctgcctcgccagggaaggtgatcttctgtccatgctgcatacccttctc 102
Query: 992 aacatgaacctcaagaaccttcttctcctgaacgaccttctcaccctt 1039
|| ||||| || || |||||||| ||||| ||||||||||||||
Sbjct: 101 gaccaccacctccaggactttcttctcgtgaaccaccttctcaccctt 54
>gb|BJ547299.1|BJ547299 BJ547299 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal30b23 5', mRNA sequence
Length = 628
Score = 230 bits (116), Expect = 1e-058
Identities = 335/408 (82%)
Strand = Plus / Minus
Query: 632 cagcgagtcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcct 691
||||||||||||||| |||||||||| || ||||| ||||| ||||||||||| |||||
Sbjct: 460 cagcgagtcggggaaaaccaccgtgaagtggatgtagagcttgcccttcatgaagggcct 401
Query: 692 ctggtaaatcggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttc 751
|||||| || ||||| ||||| ||||| || ||||||||| ||||| || ||||||||
Sbjct: 400 ctggtacatgggcatgccctcgtcgttgatcgccttgaatgaatcaggcttgacaacttc 341
Query: 752 accagggtctgatttgatgagaagctgcctgttgtccagatgtgtaagaacaaattggaa 811
|| |||| || |||||||| ||||| ||| |||| ||| | || ||| |||||||
Sbjct: 340 cccggggttggacttgatgagcagctgtctgccatccaaatgagctaggacatattggaa 281
Query: 812 cccacatagtgcttcggtcagagacaaggtgtgctcatagaagagatcttcaccctttct 871
||||| || || || ||||| | || |||||||||||||||||| || ||| |||| |
Sbjct: 280 gccacagagggcctccgtcagggtcagggtgtgctcatagaagaggtcgtcagccttccg 221
Query: 872 tttgaacttggagtggtccttctgctggaggacgaatacaatgtctccagtaacggtatc 931
||||| |||| ||| |||||||||||||||||||| | ||||||||||| ||||||||
Sbjct: 220 cttgaatttggggtgctccttctgctggaggacgaagattatgtctccagtgacggtatc 161
Query: 932 aggcgcttcatcagcttcaccagggaaggtgatcttctggctgtgttgcattcccttctc 991
|||||||||||| || || |||||||||||||||||||| | || ||||| ||||||||
Sbjct: 160 aggcgcttcatctgcctcgccagggaaggtgatcttctgtccatgctgcatacccttctc 101
Query: 992 aacatgaacctcaagaaccttcttctcctgaacgaccttctcaccctt 1039
|| ||||| || || |||||||| ||||| ||||||||||||||
Sbjct: 100 gaccaccacctccaggactttcttctcgtgaaccaccttctcaccctt 53
>gb|BJ547912.1|BJ547912 BJ547912 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal41i05 5', mRNA sequence
Length = 722
Score = 230 bits (116), Expect = 1e-058
Identities = 335/408 (82%)
Strand = Plus / Minus
Query: 632 cagcgagtcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcct 691
||||||||||||||| |||||||||| || ||||| ||||| ||||||||||| |||||
Sbjct: 469 cagcgagtcggggaaaaccaccgtgaagtggatgtagagcttgcccttcatgaagggcct 410
Query: 692 ctggtaaatcggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttc 751
|||||| || ||||| ||||| ||||| || ||||||||| ||||| || ||||||||
Sbjct: 409 ctggtacatgggcatgccctcgtcgttgatcgccttgaatgaatcaggcttgacaacttc 350
Query: 752 accagggtctgatttgatgagaagctgcctgttgtccagatgtgtaagaacaaattggaa 811
|| |||| || |||||||| ||||| ||| |||| ||| | || ||| |||||||
Sbjct: 349 cccggggttggacttgatgagcagctgtctgccatccaaatgagctaggacatattggaa 290
Query: 812 cccacatagtgcttcggtcagagacaaggtgtgctcatagaagagatcttcaccctttct 871
||||| || || || ||||| | || |||||||||||||||||| || ||| |||| |
Sbjct: 289 gccacagagggcctccgtcagggtcagggtgtgctcatagaagaggtcgtcagccttccg 230
Query: 872 tttgaacttggagtggtccttctgctggaggacgaatacaatgtctccagtaacggtatc 931
||||| |||| ||| |||||||||||||||||||| | ||||||||||| ||||||||
Sbjct: 229 cttgaatttggggtgctccttctgctggaggacgaagattatgtctccagtgacggtatc 170
Query: 932 aggcgcttcatcagcttcaccagggaaggtgatcttctggctgtgttgcattcccttctc 991
|||||||||||| || || |||||||||||||||||||| | || ||||| ||||||||
Sbjct: 169 aggcgcttcatctgcctcgccagggaaggtgatcttctgtccatgctgcatacccttctc 110
Query: 992 aacatgaacctcaagaaccttcttctcctgaacgaccttctcaccctt 1039
|| ||||| || || |||||||| ||||| ||||||||||||||
Sbjct: 109 gaccaccacctccaggactttcttctcgtgaaccaccttctcaccctt 62
Score = 36.2 bits (18), Expect = 3.7
Identities = 33/38 (86%)
Strand = Plus / Minus
Query: 441 ccgcccggcatctcgtcgtcctcctcgtacgcctcctg 478
||||||||||| || |||||||| || || ||||||||
Sbjct: 657 ccgcccggcatatcctcgtcctcgtcataggcctcctg 620
>gb|BF616389.2|BF616389 HVSMEc0007C16f Hordeum vulgare seedling shoot EST library HVcDNA0003
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEc0007C16f, mRNA sequence
Length = 605
Score = 228 bits (115), Expect = 5e-058
Identities = 231/269 (85%), Gaps = 3/269 (1%)
Strand = Plus / Minus
Query: 1412 tccaccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacg 1471
||||| ||| |||||||| ||||| |||||||| ||||||||||||||||| ||||| ||
Sbjct: 322 tccacgacctcccattccctccttgagggcatcctcaccatactgatcatagatctctcg 263
Query: 1472 tttctctggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtc 1531
|| || ||||||||||| |||||||| || || || |||||||||||||||||||||||
Sbjct: 262 cttatcaggatcactcaagacctcataagcctgagctagctccttgaacttctcggggtc 203
Query: 1532 accgcccttgtcggggtggttcttgatagcggccttgcggtaggccttcttgaggtcgtc 1591
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 202 gccgcccttgtcggggtggttcttgatggcggccttgcggtaggccttcttgaggtcgtc 143
Query: 1592 ctgggacgccgacttgggcaccccgaggatctcatagtacttggtgttgtcgctcttctt 1651
| |||||| |||||||| || |||||||| ||||| ||| ||| | |||||||
Sbjct: 142 ttaggacgcgtcattgggcacgcccaggatctcgtagtagcgcgtgctgtggatcttctt 83
Query: 1652 cggcg---cgcgcccgaacatcttgcctt 1677
||||| |||| |||||||||| |||||
Sbjct: 82 cggcggcccgcggccgaacatctcgcctt 54
>gb|BJ455006.1|BJ455006 BJ455006 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak15k19 3', mRNA sequence
Length = 596
Score = 228 bits (115), Expect = 5e-058
Identities = 248/289 (85%), Gaps = 15/289 (5%)
Strand = Plus / Plus
Query: 408 gcttactgttgcgcgcactgcactctctgggctccgcc---cggcatctcgtcgtcctcc 464
|||||||||||||||||||||||||||||||| ||||| ||||||||||||||| |||
Sbjct: 314 gcttactgttgcgcgcactgcactctctgggcaccgcctcccggcatctcgtcgtcgtcc 373
Query: 465 tcgt---acgcctcctgggcagcg---tgagcttgcttcctgcgcatctcttcctcgatg 518
|||| |||||||||| ||||| || |||| ||| |||||||| ||||| |||
Sbjct: 374 tcgtcgtacgcctcctgagcagcagcatgggctt---tccgacgcatctcctcctccatg 430
Query: 519 ttgttcacatcatgcatagtcgtctcctcgcattcatctatctccatgtctgtcagcttg 578
||| ||||||||||| ||||||||||||||||| || | ||||||||| |||||||||
Sbjct: 431 ttg---acatcatgcatcgtcgtctcctcgcattcgtcaagctccatgtcagtcagcttg 487
Query: 579 gatgaaggccttggtggaagtactgtctcgagagccttgcactgctctggtgccagcgag 638
|||| |||| |||||||||| || | |||||||||||||||||| || |||||||| |||
Sbjct: 488 gatgcaggctttggtggaagaacggcctcgagagccttgcactgatccggtgccagagag 547
Query: 639 tcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaag 687
|||||||||||||| |||||||| ||||| ||||| |||||||||||||
Sbjct: 548 tcggggaactccactgtgaaatggatgtagagcttgcccttcatgaaag 596
>gb|BF267676.2|BF267676 HV_CEa0018J08f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0018J08f, mRNA sequence
Length = 814
Score = 220 bits (111), Expect = 1e-055
Identities = 221/255 (86%), Gaps = 2/255 (0%)
Strand = Plus / Minus
Query: 1419 ccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttctct 1478
|||||||||| ||| || || ||||||| ||||||| |||||| |||||||| |||||
Sbjct: 378 ccacccattctttcgttgagagcatcttagccatacttatcatagatctcacgcttctca 319
Query: 1479 ggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccgccc 1538
|| |||||||||||||||||||||||||| |||||||||||||| |||||||||||||
Sbjct: 318 gggtcactcaaaacctcataggcttgtgccagctccttgaacttacgggggtcaccgccc 259
Query: 1539 ttgtcggggtggttcttgatagcggccttgcggtaggccttcttgaggtcgtcctgggac 1598
| |||||||||||||| || |||||| |||||||||| || ||||||||||||||||
Sbjct: 258 -tctcggggtggttcttcatggcggccatgcggtaggcattattgaggtcgtcctgggcg 200
Query: 1599 gccga-cttgggcaccccgaggatctcatagtacttggtgttgtcgctcttcttcggcgc 1657
|| | ||||||||||||||||| ||| |||||||||||| ||||||||||||| || ||
Sbjct: 199 gcgtaccttgggcaccccgaggacctcgtagtacttggtgctgtcgctcttcttgggggc 140
Query: 1658 gcgcccgaacatctt 1672
||| | |||||||||
Sbjct: 139 gcggcagaacatctt 125
>gb|AV934096.1|AV934096 AV934096 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baalp23 5', mRNA sequence
Length = 546
Score = 216 bits (109), Expect = 2e-054
Identities = 297/360 (82%)
Strand = Plus / Minus
Query: 632 cagcgagtcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcct 691
||||||||||||||| |||||||||| || ||||| ||||| ||||||||||| |||||
Sbjct: 426 cagcgagtcggggaaaaccaccgtgaagtggatgtagagcttgcccttcatgaagggcct 367
Query: 692 ctggtaaatcggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttc 751
|||||| || ||||| ||||| ||||| || ||||||||| ||||| || ||||||||
Sbjct: 366 ctggtacatgggcatgccctcgtcgttgatcgccttgaatgaatcaggcttgacaacttc 307
Query: 752 accagggtctgatttgatgagaagctgcctgttgtccagatgtgtaagaacaaattggaa 811
|| |||| || |||||||| ||||| ||| |||| ||| | || ||| |||||||
Sbjct: 306 cccggggttggacttgatgagcagctgtctgccatccaaatgagctaggacatattggaa 247
Query: 812 cccacatagtgcttcggtcagagacaaggtgtgctcatagaagagatcttcaccctttct 871
||||| || || || ||||| | || |||||||||||||||||| || ||| |||| |
Sbjct: 246 gccacagagggcctccgtcagggtcagggtgtgctcatagaagaggtcgtcagccttccg 187
Query: 872 tttgaacttggagtggtccttctgctggaggacgaatacaatgtctccagtaacggtatc 931
||||| |||| ||| |||||||||||||||||||| | ||||||||||| ||||||||
Sbjct: 186 cttgaatttggggtgctccttctgctggaggacgaagattatgtctccagtgacggtatc 127
Query: 932 aggcgcttcatcagcttcaccagggaaggtgatcttctggctgtgttgcattcccttctc 991
|||||||||||| || || |||||||||||||||||||| | || ||||| ||||||||
Sbjct: 126 aggcgcttcatctgcctcgccagggaaggtgatcttctgnccatgctgcatacccttctc 67
>gb|BJ451484.1|BJ451484 BJ451484 K. Sato unpublished cDNA library, cv. Akashinriki vegetative
stage leaves Hordeum vulgare subsp. vulgare cDNA clone
baak34c22 5', mRNA sequence
Length = 585
Score = 216 bits (109), Expect = 2e-054
Identities = 355/437 (81%)
Strand = Plus / Minus
Query: 603 gtctcgagagccttgcactgctctggtgccagcgagtcggggaactccaccgtgaaatga 662
|||||||| ||||||||||| || | ||||||||||||||| | |||||||| ||
Sbjct: 462 gtctcgagggccttgcactggtccaggctcagcgagtcggggaaaacaaccgtgaagtgg 403
Query: 663 atgtacagcttccccttcatgaaaggcctctggtaaatcggcatcccctcatcgtttatt 722
||||| ||||| ||||||||||| ||||||||||| || ||||| ||||| ||||| ||
Sbjct: 402 atgtagagcttgcccttcatgaagggcctctggtacatgggcatgccctcgtcgttgatc 343
Query: 723 gccttgaattggtcaggtttaacaacttcaccagggtctgatttgatgagaagctgcctg 782
||||||||| ||||| || |||||||| || |||| || |||||||| ||||| |||
Sbjct: 342 gccttgaatgaatcaggcttgacaacttccccggggttggacttgatgagcagctgtctg 283
Query: 783 ttgtccagatgtgtaagaacaaattggaacccacatagtgcttcggtcagagacaaggtg 842
|||| ||| | || ||| ||||||| ||||| || || || ||||| | || ||||
Sbjct: 282 ccatccaaatgagctaggacatattggaagccacagagggcctccgtcagggtcagggtg 223
Query: 843 tgctcatagaagagatcttcaccctttcttttgaacttggagtggtccttctgctggagg 902
|||||||||||||| || || |||| | ||||| |||| ||| |||||||||||||||
Sbjct: 222 tgctcatagaagaggtcgtcggccttccgcttgaatttggggtgctccttctgctggagg 163
Query: 903 acgaatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtg 962
||||| | ||||||||||| |||||||||||||||||||| || || ||||||||||||
Sbjct: 162 acgaagattatgtctccagtgacggtatcaggcgcttcatctgcctctccagggaaggtg 103
Query: 963 atcttctggctgtgttgcattcccttctcaacatgaacctcaagaaccttcttctcctga 1022
|||||||| | || ||||| |||||||| || ||||| || || |||||||| |||
Sbjct: 102 atcttctgtccatgctgcatacccttctcgaccaccacctccaggactttcttctcgtga 43
Query: 1023 acgaccttctcaccctt 1039
|| ||||||||||||||
Sbjct: 42 accaccttctcaccctt 26
>gb|BJ547221.1|BJ547221 BJ547221 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal25k12 5', mRNA sequence
Length = 554
Score = 216 bits (109), Expect = 2e-054
Identities = 335/409 (81%), Gaps = 1/409 (0%)
Strand = Plus / Minus
Query: 632 cagcgagtcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcct 691
||||||||||||||| |||||||||| || ||||| ||||| ||||||||||| |||||
Sbjct: 436 cagcgagtcggggaaaaccaccgtgaagtggatgtagagcttgcccttcatgaagggcct 377
Query: 692 ctggtaaatcggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttc 751
|||||| || ||||| ||||| ||||| || ||||||||| ||||| || ||||||||
Sbjct: 376 ctggtacatgggcatgccctcgtcgttgatcgccttgaatgaatcaggcttgacaacttc 317
Query: 752 accagggtctgatttgatgagaagctgcctgttgtccagatgtgtaagaacaaattggaa 811
|| |||| || |||||||| ||||| ||| |||| ||| | || ||| |||||||
Sbjct: 316 cccggggttggacttgatgagcagctgtctgccatccaaatgagctaggacatattggaa 257
Query: 812 cccacatagtgcttcggtcagagacaaggtgtgctcatagaagagatcttcaccctttct 871
||||| || || || ||||| | || |||||||||||||||||| || ||| |||| |
Sbjct: 256 gccacagagggcctccgtcagggtcagggtgtgctcatagaagaggtcgtcagccttccg 197
Query: 872 tttgaacttggagtggtccttctgctggaggacgaatacaatgtct-ccagtaacggtat 930
||||| |||| ||| |||||||||||||||||||| | |||||| ||||| |||||||
Sbjct: 196 cttgaatttggggtgctccttctgctggaggacgaagattatgtctcccagtgacggtat 137
Query: 931 caggcgcttcatcagcttcaccagggaaggtgatcttctggctgtgttgcattcccttct 990
||||||||||||| || || |||||||||||||||||||| | || ||||| |||||||
Sbjct: 136 caggcgcttcatctgcctcgccagggaaggtgatcttctgtccatgctgcatacccttct 77
Query: 991 caacatgaacctcaagaaccttcttctcctgaacgaccttctcaccctt 1039
| || ||||| || || |||||||| ||||| ||||||||||||||
Sbjct: 76 cgaccaccacctccaggactttcttctcgtgaaccaccttctcaccctt 28
>gb|AV913049.1|AV913049 AV913049 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags11j11 5', mRNA sequence
Length = 534
Score = 214 bits (108), Expect = 7e-054
Identities = 297/360 (82%)
Strand = Plus / Minus
Query: 632 cagcgagtcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcct 691
||||||||||||||| |||||||||| || ||||| ||||| ||||||||||| |||||
Sbjct: 383 cagcgagtcggggaaaaccaccgtgaagtggatgtagagcttgcccttcatgaagggcct 324
Query: 692 ctggtaaatcggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttc 751
|||||| || ||||| ||||| ||||| || ||||||||| ||||| || ||||||||
Sbjct: 323 ctggtacatgggcatgccctcgtcgttgatcgccttgaatgaatcaggcttgacaacttc 264
Query: 752 accagggtctgatttgatgagaagctgcctgttgtccagatgtgtaagaacaaattggaa 811
|| |||| || |||||||| ||||| ||| |||| ||| | || ||| |||||||
Sbjct: 263 cccggggttggacttgatgagcagctgtctgccatccaaatgagctaggacatattggaa 204
Query: 812 cccacatagtgcttcggtcagagacaaggtgtgctcatagaagagatcttcaccctttct 871
||||| || || || ||||| | || |||||||||||||||||| || ||| |||| |
Sbjct: 203 gccacagagggcctccgtcagggtcagggtgtgctcatagaagaggtcgtcagccttccg 144
Query: 872 tttgaacttggagtggtccttctgctggaggacgaatacaatgtctccagtaacggtatc 931
||||| |||| ||| |||||||||||||||||||| | ||||||||||| ||||||||
Sbjct: 143 cttgaatttggggtgctccttctgctggaggacgaagattatgtctccagtgacggtatc 84
Query: 932 aggcgcttcatcagcttcaccagggaaggtgatcttctggctgtgttgcattcccttctc 991
|||||||||||| || || |||||||||||||||||||| | || ||||| ||||||||
Sbjct: 83 aggcgcttcatctgcctcgccagggaaggtgatcttctgtccatgctgcatacccttctc 24
>gb|BQ754331.1|BQ754331 EBca01_SQ003_J15_R carpel, pre-anthesis, no treatment, cv Optic,
EBca01 Hordeum vulgare subsp. vulgare cDNA clone
EBca01_SQ003_J15 5', mRNA sequence
Length = 545
Score = 214 bits (108), Expect = 7e-054
Identities = 396/492 (80%)
Strand = Plus / Minus
Query: 632 cagcgagtcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcct 691
||||||||||||||| | |||||||| || ||||| ||||| ||||||||||| |||||
Sbjct: 545 cagcgagtcggggaaaacaaccgtgaagtggatgtagagcttgcccttcatgaagggcct 486
Query: 692 ctggtaaatcggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttc 751
|||||| || ||||| ||||| ||||| || ||||||||| ||||| || ||||||||
Sbjct: 485 ctggtacatgggcatgccctcgtcgttgatcgccttgaatgaatcaggcttgacaacttc 426
Query: 752 accagggtctgatttgatgagaagctgcctgttgtccagatgtgtaagaacaaattggaa 811
|| |||| || |||||||| | ||| ||| |||| ||| | || ||| |||||||
Sbjct: 425 cccggggttggacttgatgagcatctgtctgccatccaaatgagctaggacatattggaa 366
Query: 812 cccacatagtgcttcggtcagagacaaggtgtgctcatagaagagatcttcaccctttct 871
||||| || || || ||||| | || |||||||||||||||||| || || |||| |
Sbjct: 365 gccacagagggcctccgtcagggtcagggtgtgctcatagaagaggtcgtcggccttccg 306
Query: 872 tttgaacttggagtggtccttctgctggaggacgaatacaatgtctccagtaacggtatc 931
|||| ||| ||| |||||||||||||||||||| | ||||||||||| ||||||||
Sbjct: 305 catgaatatggggtgctccttctgctggaggacgaagattatgtctccagtgacggtatc 246
Query: 932 aggcgcttcatcagcttcaccagggaaggtgatcttctggctgtgttgcattcccttctc 991
|||||||||||| || || |||||||||||||||||||| | || ||||| ||||||||
Sbjct: 245 aggcgcttcatctgcctctccagggaaggtgatcttctgtccatgctgcatacccttctc 186
Query: 992 aacatgaacctcaagaaccttcttctcctgaacgaccttctcacccttacaccctgggca 1051
|| ||||| || || |||||||| ||||| |||||||||||||| ||| |||
Sbjct: 185 gaccaccacctccaggactttcttctcgtgaaccaccttctcacccttgcactgcctgca 126
Query: 1052 gcggtccttctcgttgatgctctccccagtccccttgcactcgttgcaaggctgctgcat 1111
|| ||||| || ||||| |||| ||| | ||||||||||| ||||| |||||||||||
Sbjct: 125 acgatccttatcactgatggtctcaccacttcccttgcactcattgcagggctgctgcat 66
Query: 1112 ctgctgtatcat 1123
|||||||||||
Sbjct: 65 ttgctgtatcat 54
>gb|BJ548555.1|BJ548555 BJ548555 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal30b23 3', mRNA sequence
Length = 667
Score = 214 bits (108), Expect = 7e-054
Identities = 297/360 (82%)
Strand = Plus / Plus
Query: 632 cagcgagtcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcct 691
||||||||||||||| |||||||||| || ||||| ||||| ||||||||||| |||||
Sbjct: 307 cagcgagtcggggaaaaccaccgtgaagtggatgtagagcttgcccttcatgaagggcct 366
Query: 692 ctggtaaatcggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttc 751
|||||| || ||||| ||||| ||||| || ||||||||| ||||| || ||||||||
Sbjct: 367 ctggtacatgggcatgccctcgtcgttgatcgccttgaatgaatcaggcttgacaacttc 426
Query: 752 accagggtctgatttgatgagaagctgcctgttgtccagatgtgtaagaacaaattggaa 811
|| |||| || |||||||| ||||| ||| |||| ||| | || ||| |||||||
Sbjct: 427 cccggggttggacttgatgagcagctgtctgccatccaaatgagctaggacatattggaa 486
Query: 812 cccacatagtgcttcggtcagagacaaggtgtgctcatagaagagatcttcaccctttct 871
||||| || || || ||||| | || |||||||||||||||||| || ||| |||| |
Sbjct: 487 gccacagagggcctccgtcagggtcagggtgtgctcatagaagaggtcgtcagccttccg 546
Query: 872 tttgaacttggagtggtccttctgctggaggacgaatacaatgtctccagtaacggtatc 931
||||| |||| ||| |||||||||||||||||||| | ||||||||||| ||||||||
Sbjct: 547 cttgaatttggggtgctccttctgctggaggacgaagattatgtctccagtgacggtatc 606
Query: 932 aggcgcttcatcagcttcaccagggaaggtgatcttctggctgtgttgcattcccttctc 991
|||||||||||| || || |||||||||||||||||||| | || ||||| ||||||||
Sbjct: 607 aggcgcttcatctgcctcgccagggaaggtgatcttctgtccatgctgcatacccttctc 666
Score = 36.2 bits (18), Expect = 3.7
Identities = 33/38 (86%)
Strand = Plus / Plus
Query: 441 ccgcccggcatctcgtcgtcctcctcgtacgcctcctg 478
||||||||||| || |||||||| || || ||||||||
Sbjct: 119 ccgcccggcatatcctcgtcctcgtcataggcctcctg 156
>gb|BJ548639.1|BJ548639 BJ548639 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal31m24 3', mRNA sequence
Length = 668
Score = 214 bits (108), Expect = 7e-054
Identities = 297/360 (82%)
Strand = Plus / Plus
Query: 632 cagcgagtcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcct 691
||||||||||||||| |||||||||| || ||||| ||||| ||||||||||| |||||
Sbjct: 308 cagcgagtcggggaaaaccaccgtgaagtggatgtagagcttgcccttcatgaagggcct 367
Query: 692 ctggtaaatcggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttc 751
|||||| || ||||| ||||| ||||| || ||||||||| ||||| || ||||||||
Sbjct: 368 ctggtacatgggcatgccctcgtcgttgatcgccttgaatgaatcaggcttgacaacttc 427
Query: 752 accagggtctgatttgatgagaagctgcctgttgtccagatgtgtaagaacaaattggaa 811
|| |||| || |||||||| ||||| ||| |||| ||| | || ||| |||||||
Sbjct: 428 cccggggttggacttgatgagcagctgtctgccatccaaatgagctaggacatattggaa 487
Query: 812 cccacatagtgcttcggtcagagacaaggtgtgctcatagaagagatcttcaccctttct 871
||||| || || || ||||| | || |||||||||||||||||| || ||| |||| |
Sbjct: 488 gccacagagggcctccgtcagggtcagggtgtgctcatagaagaggtcgtcagccttccg 547
Query: 872 tttgaacttggagtggtccttctgctggaggacgaatacaatgtctccagtaacggtatc 931
||||| |||| ||| |||||||||||||||||||| | ||||||||||| ||||||||
Sbjct: 548 cttgaatttggggtgctccttctgctggaggacgaagattatgtctccagtgacggtatc 607
Query: 932 aggcgcttcatcagcttcaccagggaaggtgatcttctggctgtgttgcattcccttctc 991
|||||||||||| || || |||||||||||||||||||| | || ||||| ||||||||
Sbjct: 608 aggcgcttcatctgcctcgccagggaaggtgatcttctgtccatgctgcatacccttctc 667
Score = 36.2 bits (18), Expect = 3.7
Identities = 33/38 (86%)
Strand = Plus / Plus
Query: 441 ccgcccggcatctcgtcgtcctcctcgtacgcctcctg 478
||||||||||| || |||||||| || || ||||||||
Sbjct: 120 ccgcccggcatatcctcgtcctcgtcataggcctcctg 157
>gb|BJ549776.1|BJ549776 BJ549776 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags31o09 3', mRNA sequence
Length = 668
Score = 214 bits (108), Expect = 7e-054
Identities = 297/360 (82%)
Strand = Plus / Plus
Query: 632 cagcgagtcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcct 691
||||||||||||||| |||||||||| || ||||| ||||| ||||||||||| |||||
Sbjct: 307 cagcgagtcggggaaaaccaccgtgaagtggatgtagagcttgcccttcatgaagggcct 366
Query: 692 ctggtaaatcggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttc 751
|||||| || ||||| ||||| ||||| || ||||||||| ||||| || ||||||||
Sbjct: 367 ctggtacatgggcatgccctcgtcgttgatcgccttgaatgaatcaggcttgacaacttc 426
Query: 752 accagggtctgatttgatgagaagctgcctgttgtccagatgtgtaagaacaaattggaa 811
|| |||| || |||||||| ||||| ||| |||| ||| | || ||| |||||||
Sbjct: 427 cccggggttggacttgatgagcagctgtctgccatccaaatgagctaggacatattggaa 486
Query: 812 cccacatagtgcttcggtcagagacaaggtgtgctcatagaagagatcttcaccctttct 871
||||| || || || ||||| | || |||||||||||||||||| || ||| |||| |
Sbjct: 487 gccacagagggcctccgtcagggtcagggtgtgctcatagaagaggtcgtcagccttccg 546
Query: 872 tttgaacttggagtggtccttctgctggaggacgaatacaatgtctccagtaacggtatc 931
||||| |||| ||| |||||||||||||||||||| | ||||||||||| ||||||||
Sbjct: 547 cttgaatttggggtgctccttctgctggaggacgaagattatgtctccagtgacggtatc 606
Query: 932 aggcgcttcatcagcttcaccagggaaggtgatcttctggctgtgttgcattcccttctc 991
|||||||||||| || || |||||||||||||||||||| | || ||||| ||||||||
Sbjct: 607 aggcgcttcatctgcctcgccagggaaggtgatcttctgtccatgctgcatacccttctc 666
Score = 36.2 bits (18), Expect = 3.7
Identities = 33/38 (86%)
Strand = Plus / Plus
Query: 441 ccgcccggcatctcgtcgtcctcctcgtacgcctcctg 478
||||||||||| || |||||||| || || ||||||||
Sbjct: 119 ccgcccggcatatcctcgtcctcgtcataggcctcctg 156
>gb|BJ549828.1|BJ549828 BJ549828 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags33e03 3', mRNA sequence
Length = 661
Score = 212 bits (107), Expect = 3e-053
Identities = 281/339 (82%)
Strand = Plus / Plus
Query: 632 cagcgagtcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcct 691
||||||||||||||| |||||||||| || ||||| ||||| ||||||||||| |||||
Sbjct: 308 cagcgagtcggggaaaaccaccgtgaagtggatgtagagcttgcccttcatgaagggcct 367
Query: 692 ctggtaaatcggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttc 751
|||||| || ||||| ||||| ||||| || ||||||||| ||||| || ||||||||
Sbjct: 368 ctggtacatgggcatgccctcgtcgttgatcgccttgaatgaatcaggcttgacaacttc 427
Query: 752 accagggtctgatttgatgagaagctgcctgttgtccagatgtgtaagaacaaattggaa 811
|| |||| || |||||||| ||||| ||| |||| ||| | || ||| |||||||
Sbjct: 428 cccggggttggacttgatgagcagctgtctgccatccaaatgagctaggacatattggaa 487
Query: 812 cccacatagtgcttcggtcagagacaaggtgtgctcatagaagagatcttcaccctttct 871
||||| || || || ||||| | || |||||||||||||||||| || ||| |||| |
Sbjct: 488 gccacagagggcctccgtcagggtcagggtgtgctcatagaagaggtcgtcagccttccg 547
Query: 872 tttgaacttggagtggtccttctgctggaggacgaatacaatgtctccagtaacggtatc 931
||||| |||| ||| |||||||||||||||||||| | ||||||||||| ||||||||
Sbjct: 548 cttgaatttggggtgctccttctgctggaggacgaagattatgtctccagtgacggtatc 607
Query: 932 aggcgcttcatcagcttcaccagggaaggtgatcttctg 970
|||||||||||| || || ||||||||||||||||||||
Sbjct: 608 aggcgcttcatctgcctcgccagggaaggtgatcttctg 646
Score = 36.2 bits (18), Expect = 3.7
Identities = 33/38 (86%)
Strand = Plus / Plus
Query: 441 ccgcccggcatctcgtcgtcctcctcgtacgcctcctg 478
||||||||||| || |||||||| || || ||||||||
Sbjct: 120 ccgcccggcatatcctcgtcctcgtcataggcctcctg 157
>gb|BJ549377.1|BJ549377 BJ549377 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags31o09 5', mRNA sequence
Length = 454
Score = 210 bits (106), Expect = 1e-052
Identities = 367/454 (80%)
Strand = Plus / Minus
Query: 670 gcttccccttcatgaaaggcctctggtaaatcggcatcccctcatcgtttattgccttga 729
|||| ||||||||||| ||||||||||| || ||||| ||||| ||||| || |||||||
Sbjct: 454 gcttgcccttcatgaagggcctctggtacatgggcatgccctcgtcgttgatcgccttga 395
Query: 730 attggtcaggtttaacaacttcaccagggtctgatttgatgagaagctgcctgttgtcca 789
|| ||||| || |||||||| || |||| || |||||||| ||||| ||| ||||
Sbjct: 394 atgaatcaggcttgacaacttccccggggttggacttgatgagcagctgtctgccatcca 335
Query: 790 gatgtgtaagaacaaattggaacccacatagtgcttcggtcagagacaaggtgtgctcat 849
||| | || ||| ||||||| ||||| || || || ||||| | || |||||||||||
Sbjct: 334 aatgagctaggacatattggaagccacagagggcctccgtcagggtcagggtgtgctcat 275
Query: 850 agaagagatcttcaccctttcttttgaacttggagtggtccttctgctggaggacgaata 909
||||||| || ||| |||| | ||||| |||| ||| |||||||||||||||||||| |
Sbjct: 274 agaagaggtcgtcagccttccgcttgaatttggggtgctccttctgctggaggacgaaga 215
Query: 910 caatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatcttct 969
||||||||||| |||||||||||||||||||| || || |||||||||||||||||||
Sbjct: 214 ttatgtctccagtgacggtatcaggcgcttcatctgcctcgccagggaaggtgatcttct 155
Query: 970 ggctgtgttgcattcccttctcaacatgaacctcaagaaccttcttctcctgaacgacct 1029
| | || ||||| |||||||| || ||||| || || |||||||| ||||| ||||
Sbjct: 154 gtccatgctgcatacccttctcgaccaccacctccaggactttcttctcgtgaaccacct 95
Query: 1030 tctcacccttacaccctgggcagcggtccttctcgttgatgctctccccagtccccttgc 1089
|||||||||| ||| ||| || ||||| || ||||| |||| ||| | ||| |||
Sbjct: 94 tctcacccttgcactgcccgcaacgatccttatcactgatggtctcaccacttcccctgc 35
Query: 1090 actcgttgcaaggctgctgcatctgctgtatcat 1123
|||| ||||| ||||||||||| |||||||||||
Sbjct: 34 actcattgcagggctgctgcatttgctgtatcat 1
>gb|BU998787.1|BU998787 HI12C19r HI Hordeum vulgare subsp. vulgare cDNA clone HI12C19
5-PRIME, mRNA sequence
Length = 250
Score = 208 bits (105), Expect = 4e-052
Identities = 176/199 (88%), Gaps = 3/199 (1%)
Strand = Plus / Minus
Query: 1482 tcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccgcccttg 1541
|||||||| |||||||| || || || ||||||||||||||||||||||| |||||||||
Sbjct: 245 tcactcaagacctcataagcctgagctagctccttgaacttctcggggtcgccgcccttg 186
Query: 1542 tcggggtggttcttgatagcggccttgcggtaggccttcttgaggtcgtcctgggacgcc 1601
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 tcggggtggttcttgatggcggccttgcggtaggccttcttgaggtcgtcctgggacgcg 126
Query: 1602 gacttgggcaccccgaggatctcatagtacttggtgttgtcgctcttcttcggcg---cg 1658
||||||||| || |||||||| ||||| ||| |||||||||||||||||| ||
Sbjct: 125 tccttgggcacgcccaggatctcgtagtagcgcgtgctgtcgctcttcttcggcggcccg 66
Query: 1659 cgcccgaacatcttgcctt 1677
|| |||||||||| |||||
Sbjct: 65 cggccgaacatctcgcctt 47
>gb|BJ549026.1|BJ549026 BJ549026 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal38p02 3', mRNA sequence
Length = 665
Score = 208 bits (105), Expect = 4e-052
Identities = 296/360 (82%)
Strand = Plus / Plus
Query: 632 cagcgagtcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcct 691
||||||||||||||| |||||||||| || ||||| ||||| ||||||||||| |||||
Sbjct: 304 cagcgagtcggggaaaaccaccgtgaagtggatgtagagcttgcccttcatgaagggcct 363
Query: 692 ctggtaaatcggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttc 751
|||||| || ||||| ||||| ||||| || ||||||||| ||||| || ||||||||
Sbjct: 364 ctggtacatgggcatgccctcgtcgttgatcgccttgaatgaatcaggcttgacaacttc 423
Query: 752 accagggtctgatttgatgagaagctgcctgttgtccagatgtgtaagaacaaattggaa 811
|| |||| || |||||||| ||||| ||| |||| ||| | || ||| |||||||
Sbjct: 424 cccggggttggacttgatgagcagctgtctgccatccaaatgagctaggacatattggaa 483
Query: 812 cccacatagtgcttcggtcagagacaaggtgtgctcatagaagagatcttcaccctttct 871
||||| || || || ||||| | || |||||||||||||||||| || ||| |||| |
Sbjct: 484 gccacagagggcctccgtcagggtcagggtgtgctcatagaagaggtcgtcagccttccg 543
Query: 872 tttgaacttggagtggtccttctgctggaggacgaatacaatgtctccagtaacggtatc 931
||||| |||| ||| |||||||||||||||||||| | |||||| |||| ||||||||
Sbjct: 544 cttgaatttggggtgctccttctgctggaggacgaagattatgtctncagtgacggtatc 603
Query: 932 aggcgcttcatcagcttcaccagggaaggtgatcttctggctgtgttgcattcccttctc 991
|||||||||||| || || |||||||||||||||||||| | || ||||| ||||||||
Sbjct: 604 aggcgcttcatctgcctcgccagggaaggtgatcttctgtccatgctgcatacccttctc 663
Score = 36.2 bits (18), Expect = 3.7
Identities = 33/38 (86%)
Strand = Plus / Plus
Query: 441 ccgcccggcatctcgtcgtcctcctcgtacgcctcctg 478
||||||||||| || |||||||| || || ||||||||
Sbjct: 116 ccgcccggcatatcctcgtcctcgtcataggcctcctg 153
>gb|BE193876.2|BE193876 HVSMEh0082M09f Hordeum vulgare 5-45 DAP spike EST library HVcDNA0009
(5 to 45 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEh0082M09f, mRNA sequence
Length = 753
Score = 204 bits (103), Expect = 7e-051
Identities = 349/431 (80%)
Strand = Plus / Minus
Query: 603 gtctcgagagccttgcactgctctggtgccagcgagtcggggaactccaccgtgaaatga 662
|||||||| ||||||||||| || | ||||||||||||||| | |||||||| ||
Sbjct: 431 gtctcgagggccttgcactggtccaggctcagcgagtcggggaaaacaaccgtgaagtgg 372
Query: 663 atgtacagcttccccttcatgaaaggcctctggtaaatcggcatcccctcatcgtttatt 722
||||| ||||| ||||||||||| ||||||||||| || ||||| ||||| ||||| ||
Sbjct: 371 atgtagagcttgcccttcatgaagggcctctggtacatgggcatgccctcgtcgttgatc 312
Query: 723 gccttgaattggtcaggtttaacaacttcaccagggtctgatttgatgagaagctgcctg 782
||||||||| ||||| || |||||||| || |||| || |||||||| ||||| |||
Sbjct: 311 gccttgaatgaatcaggcttgacaacttccccggggttggacttgatgagcagctgtctg 252
Query: 783 ttgtccagatgtgtaagaacaaattggaacccacatagtgcttcggtcagagacaaggtg 842
|||| ||| | || ||| ||||||| ||||| || || || ||||| | || ||||
Sbjct: 251 ccatccaaatgagctaggacatattggaagccacagagggcctccgtcagggtcagggtg 192
Query: 843 tgctcatagaagagatcttcaccctttcttttgaacttggagtggtccttctgctggagg 902
|||||||||||||| || || |||| | ||||| |||| ||| |||||||||||||||
Sbjct: 191 tgctcatagaagaggtcgtcggccttccgcttgaatttggggtgctccttctgctggagg 132
Query: 903 acgaatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtg 962
||||| | ||||||||||| |||||||||||||||||||| || || ||||||||||||
Sbjct: 131 acgaagattatgtctccagtgacggtatcaggcgcttcatctgcctctccagggaaggtg 72
Query: 963 atcttctggctgtgttgcattcccttctcaacatgaacctcaagaaccttcttctcctga 1022
|||||||| | || ||||| |||||||| || ||||| || || |||||||| |||
Sbjct: 71 atcttctgtccatgctgcatacccttctcgaccaccacctccaggactttcttctcgtga 12
Query: 1023 acgaccttctc 1033
|| ||||||||
Sbjct: 11 accaccttctc 1
>gb|BU988719.1|BU988719 HF18H21r HF Hordeum vulgare subsp. vulgare cDNA clone HF18H21
5-PRIME, mRNA sequence
Length = 536
Score = 204 bits (103), Expect = 7e-051
Identities = 367/455 (80%)
Strand = Plus / Minus
Query: 669 agcttccccttcatgaaaggcctctggtaaatcggcatcccctcatcgtttattgccttg 728
||||| ||||||||||| ||||||||||| || ||||| ||||| ||||| || ||||||
Sbjct: 532 agcttgcccttcatgaagggcctctggtacatgggcatgccctcgtcgttgatcgccttg 473
Query: 729 aattggtcaggtttaacaacttcaccagggtctgatttgatgagaagctgcctgttgtcc 788
||| ||||| || |||||||| || |||| || |||||||| ||||| ||| |||
Sbjct: 472 aatgaatcaggcttgacaacttccccggggttggacttgatgagcagctgtctgccatcc 413
Query: 789 agatgtgtaagaacaaattggaacccacatagtgcttcggtcagagacaaggtgtgctca 848
| ||| | || ||| ||||||| ||||| || || || ||||| | || ||||||||||
Sbjct: 412 aaatgagctaggacatattggaagccacagagggcctccgtcagggtcagggtgtgctca 353
Query: 849 tagaagagatcttcaccctttcttttgaacttggagtggtccttctgctggaggacgaat 908
|||||||| || || |||| | ||||| |||| ||| ||||||||||||||||||||
Sbjct: 352 tagaagaggtcgtcggccttccgcttgaatttggggtgctccttctgctggaggacgaag 293
Query: 909 acaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatcttc 968
| ||||||||||| |||||||||||||||||||| || || ||||||||||||||||||
Sbjct: 292 attatgtctccagtgacggtatcaggcgcttcatctgcctctccagggaaggtgatcttc 233
Query: 969 tggctgtgttgcattcccttctcaacatgaacctcaagaaccttcttctcctgaacgacc 1028
|| | || ||||| |||||||| || ||||| || || |||||||| ||||| |||
Sbjct: 232 tgtccatgctgcatacccttctcgaccaccacctccaggactttcttctcgtgaaccacc 173
Query: 1029 ttctcacccttacaccctgggcagcggtccttctcgttgatgctctccccagtccccttg 1088
||||||||||| ||| ||| || ||||| || ||||| |||| ||| | ||| ||
Sbjct: 172 ttctcacccttgcactgcccgcaacgatccttatcactgatggtctcaccacttcccctg 113
Query: 1089 cactcgttgcaaggctgctgcatctgctgtatcat 1123
||||| ||||| ||||||||||| |||||||||||
Sbjct: 112 cactcattgcagggctgctgcatttgctgtatcat 78
>gb|BM368741.2|BM368741 EBem08_SQ004_H16_R embryo, 40 DPA, no treatment, cv Optic, EBem08
Hordeum vulgare subsp. vulgare cDNA clone
EBem08_SQ004_H16 5', mRNA sequence
Length = 345
Score = 202 bits (102), Expect = 3e-050
Identities = 234/275 (85%), Gaps = 15/275 (5%)
Strand = Plus / Minus
Query: 408 gcttactgttgcgcgcactgcactctctgggctccgcc---cggcatctcgtcgtc---c 461
|||||||||||||||||||||||||| ||||| ||||| ||||||||||||||| |
Sbjct: 271 gcttactgttgcgcgcactgcactctntgggcaccgcctcccggcatctcgtcgtcgccc 212
Query: 462 tcctcgtacgcctcctgggcagcg---tgagcttgcttcctgcgcatctcttcctcgatg 518
|| |||||||||||||| ||||| || |||| ||| |||||||| ||||| |||
Sbjct: 211 tcgtcgtacgcctcctgagcagcagcatgggctt---tccgacgcatctcctcctccatg 155
Query: 519 ttgttcacatcatgcatagtcgtctcctcgcattcatctatctccatgtctgtcagcttg 578
||| ||||||||||| ||||||||||||||||| || | ||||||||| |||||||||
Sbjct: 154 ttg---acatcatgcatcgtcgtctcctcgcattcgtcaagctccatgtcagtcagcttg 98
Query: 579 gatgaaggccttggtggaagtactgtctcgagagccttgcactgctctggtgccagcgag 638
|||| |||| |||||||||| || | |||||||||||||||||| || |||||||| |||
Sbjct: 97 gatgcaggctttggtggaagaacggcctcgagagccttgcactgatccggtgccagagag 38
Query: 639 tcggggaactccaccgtgaaatgaatgtacagctt 673
|||||||||||||| |||||||| ||||| |||||
Sbjct: 37 tcggggaactccactgtgaaatggatgtagagctt 3
>gb|CA003896.1|CA003896 HS15P12r HS Hordeum vulgare subsp. vulgare cDNA clone HS15P12
5-PRIME, mRNA sequence
Length = 501
Score = 196 bits (99), Expect = 2e-048
Identities = 144/159 (90%)
Strand = Plus / Minus
Query: 1412 tccaccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacg 1471
||||||||| |||||||| ||||| |||||||| ||||||||||||||||| ||||| ||
Sbjct: 163 tccaccacctcccattccctccttgagggcatcctcaccatactgatcatagatctctcg 104
Query: 1472 tttctctggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtc 1531
||||| ||||||||||| |||||||| || || || |||||||||||||||||||||||
Sbjct: 103 cttctcaggatcactcaagacctcataagcctgagctagctccttgaacttctcggggtc 44
Query: 1532 accgcccttgtcggggtggttcttgatagcggccttgcg 1570
|||||||||||||||||||||||||| |||||||||||
Sbjct: 43 gccgcccttgtcggggtggttcttgatggcggccttgcg 5
Score = 50.1 bits (25), Expect = 2e-004
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 1087 tgcactcgttgcaaggctgctgcatctgctgtatcat 1123
||||||| ||||| ||||||||||| |||||||||||
Sbjct: 491 tgcactcattgcagggctgctgcatttgctgtatcat 455
Score = 38.2 bits (19), Expect = 0.94
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 1335 cccctgctgcttccaccacctcc 1357
||||||||||| |||||||||||
Sbjct: 243 cccctgctgctgccaccacctcc 221
>gb|BQ764206.1|BQ764206 EBan01_SQ005_M06_R anther, yellow stage, no treatment, cv Optic,
EBan01 Hordeum vulgare subsp. vulgare cDNA clone
EBan01_SQ005_M06 5', mRNA sequence
Length = 636
Score = 192 bits (97), Expect = 3e-047
Identities = 395/493 (80%), Gaps = 1/493 (0%)
Strand = Plus / Minus
Query: 632 cagcgagtcggggaactccacc-gtgaaatgaatgtacagcttccccttcatgaaaggcc 690
||||||||||||||| | ||| ||||| || ||||| ||||| ||||||||||| ||||
Sbjct: 618 cagcgagtcggggaaaacaacccgtgaagtggatgtagagcttgcccttcatgaagggcc 559
Query: 691 tctggtaaatcggcatcccctcatcgtttattgccttgaattggtcaggtttaacaactt 750
||||||| || ||||| ||||| ||||| || ||||||||| ||||| || |||||||
Sbjct: 558 tctggtacatgggcatgccctcgtcgttgatcgccttgaatgaatcaggcttgacaactt 499
Query: 751 caccagggtctgatttgatgagaagctgcctgttgtccagatgtgtaagaacaaattgga 810
| || |||| || |||||||| ||||| ||| |||| ||| | || ||| ||||||
Sbjct: 498 cccccgggttggacttgatgagcagctgtctgccatccaaatgagctaggacatattgga 439
Query: 811 acccacatagtgcttcggtcagagacaaggtgtgctcatagaagagatcttcaccctttc 870
| ||||| || || || ||||| | || |||||||||||||||||| || || |||| |
Sbjct: 438 agccacagagggcctccgtcagggtcagggtgtgctcatagaagaggtcgtcggccttcc 379
Query: 871 ttttgaacttggagtggtccttctgctggaggacgaatacaatgtctccagtaacggtat 930
||||| |||| ||| |||||||||||||||||||| | ||||||||||| |||||||
Sbjct: 378 gcttgaatttggggtgctccttctgctggaggacgaagattatgtctccagtgacggtat 319
Query: 931 caggcgcttcatcagcttcaccagggaaggtgatcttctggctgtgttgcattcccttct 990
||||||||||||| || || |||||||||||||||||||| | || ||||| || ||||
Sbjct: 318 caggcgcttcatctgcctctccagggaaggtgatcttctgtccatgatgcatacctttct 259
Query: 991 caacatgaacctcaagaaccttcttctcctgaacgaccttctcacccttacaccctgggc 1050
| || |||| || || || ||||| ||||| |||||||||||||| || ||
Sbjct: 258 cgaccaccaccttcaggactttattctcgtgaaccaccttctcacccttgcaatgcccgc 199
Query: 1051 agcggtccttctcgttgatgctctccccagtccccttgcactcgttgcaaggctgctgca 1110
| || ||||| || ||||| |||| ||| | ||||||||||| ||||| ||||||||||
Sbjct: 198 aacgatccttatcactgatggtctcaccacttcccttgcactcattgcagggctgctgca 139
Query: 1111 tctgctgtatcat 1123
| |||||||||||
Sbjct: 138 tttgctgtatcat 126
>gb|BI953415.1|BI953415 HVSMEm0012J14f Hordeum vulgare green seedling EST library HVcDNA0014
(Blumeria infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEm0012J14f, mRNA sequence
Length = 858
Score = 190 bits (96), Expect = 1e-046
Identities = 179/204 (87%), Gaps = 2/204 (0%)
Strand = Plus / Minus
Query: 1419 ccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttctct 1478
||||||||||| |||| || |||| ||| ||||||| |||||| |||||||| |||||
Sbjct: 385 ccacccattccatcctagagagcatgttcgccatacttatcatagatctcacgcttctca 326
Query: 1479 ggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccgccc 1538
|| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 325 gggtcactcaaaacctcataggcttgtgccagctccttgaacttctcggggtcaccgccc 266
Query: 1539 ttgtc-ggggtggttcttgatagcggccttgc-ggtaggccttcttgaggtcgtcctggg 1596
| ||| ||||||||||||||| ||||| || ||||||||||| |||||||||||||||
Sbjct: 265 tagtcaggggtggttcttgatgccggcccagcaggtaggccttcatgaggtcgtcctggg 206
Query: 1597 acgccgacttgggcaccccgagga 1620
|| |||||||||||||||||
Sbjct: 205 cggcgtccttgggcaccccgagga 182
>gb|AV918791.1|AV918791 AV918791 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags22e10 3', mRNA sequence
Length = 668
Score = 186 bits (94), Expect = 2e-045
Identities = 297/362 (82%), Gaps = 2/362 (0%)
Strand = Plus / Plus
Query: 632 cagcgagtcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcct 691
||||||||||||||| |||||||||| || ||||| ||||| ||||||||||| |||||
Sbjct: 302 cagcgagtcggggaaaaccaccgtgaagtggatgtagagcttgcccttcatgaagggcct 361
Query: 692 ctggtaaatcggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttc 751
|||||| || ||||| ||||| ||||| || ||||||||| ||||| || ||||||||
Sbjct: 362 ctggtacatgggcatgccctcgtcgttgatcgccttgaatgaatcaggcttgacaacttc 421
Query: 752 accagggtctgatttgatgagaagctgcctgttgtccagatgtgtaagaacaaattggaa 811
|| |||| || |||||||| ||||| ||| |||| ||| | || ||| |||||||
Sbjct: 422 cccggggttggacttgatgagcagctgtctgccatccaaatgagctaggacatattggaa 481
Query: 812 cccacatagtgct-tcggtcagagacaaggtgtgctcatagaagagatcttcaccctttc 870
||||| || || || ||||| | || |||||||||||||||||| || ||| |||| |
Sbjct: 482 gccacagagggccctccgtcagggtcagggtgtgctcatagaagaggtcgtcagccttcc 541
Query: 871 ttttgaacttggagtggtccttctgctggaggacgaatacaatgtctccagtaacggtat 930
||||| |||| ||| |||||||||||||||||||| | ||||||||||| |||||||
Sbjct: 542 gcttgaatttggggtgctccttctgctggaggacgaagattatgtctccagtgacggtat 601
Query: 931 caggcgcttcatcagcttcacca-gggaaggtgatcttctggctgtgttgcattcccttc 989
||||||||||||| || || ||| ||||||||||||||||| | || ||||| ||||||
Sbjct: 602 caggcgcttcatctgcctcgccaggggaaggtgatcttctgtccatgctgcatacccttc 661
Query: 990 tc 991
||
Sbjct: 662 tc 663
Score = 36.2 bits (18), Expect = 3.7
Identities = 33/38 (86%)
Strand = Plus / Plus
Query: 441 ccgcccggcatctcgtcgtcctcctcgtacgcctcctg 478
||||||||||| || |||||||| || || ||||||||
Sbjct: 114 ccgcccggcatatcctcgtcctcgtcataggcctcctg 151
>gb|AV918185.1|AV918185 AV918185 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20c14 3', mRNA sequence
Length = 617
Score = 182 bits (92), Expect = 3e-044
Identities = 257/312 (82%)
Strand = Plus / Plus
Query: 632 cagcgagtcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcct 691
||||||||||||||| |||||||||| || ||||| ||||| ||||||||||| |||||
Sbjct: 300 cagcgagtcggggaaaaccaccgtgaagtggatgtagagcttgcccttcatgaagggcct 359
Query: 692 ctggtaaatcggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttc 751
|||||| || ||||| ||||| ||||| || ||||||||| ||||| || ||||||||
Sbjct: 360 ctggtacatgggcatgccctcgtcgttgatcgccttgaatgaatcaggcttgacaacttc 419
Query: 752 accagggtctgatttgatgagaagctgcctgttgtccagatgtgtaagaacaaattggaa 811
|| |||| || |||||||| ||||| ||| |||| ||| | || ||| |||||||
Sbjct: 420 cccggggttggacttgatgagcagctgtctgccatccaaatgagctaggacatattggaa 479
Query: 812 cccacatagtgcttcggtcagagacaaggtgtgctcatagaagagatcttcaccctttct 871
||||| || || || ||||| | || |||||||||||||||||| || ||| |||| |
Sbjct: 480 gccacagagggcctccgtcagggtcagggtgtgctcatagaagaggtcgtcagccttccg 539
Query: 872 tttgaacttggagtggtccttctgctggaggacgaatacaatgtctccagtaacggtatc 931
||||| |||| ||| |||||||||||||||||||| | ||||||||||| ||||||||
Sbjct: 540 cttgaatttggggtgctccttctgctggaggacgaagattatgtctccagtgacggtatc 599
Query: 932 aggcgcttcatc 943
||||||||||||
Sbjct: 600 aggcgcttcatc 611
Score = 36.2 bits (18), Expect = 3.7
Identities = 33/38 (86%)
Strand = Plus / Plus
Query: 441 ccgcccggcatctcgtcgtcctcctcgtacgcctcctg 478
||||||||||| || |||||||| || || ||||||||
Sbjct: 112 ccgcccggcatatcctcgtcctcgtcataggcctcctg 149
>gb|AV935618.1|AV935618 AV935618 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal4o07 3', mRNA sequence
Length = 636
Score = 182 bits (92), Expect = 3e-044
Identities = 257/312 (82%)
Strand = Plus / Plus
Query: 632 cagcgagtcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcct 691
||||||||||||||| |||||||||| || ||||| ||||| ||||||||||| |||||
Sbjct: 320 cagcgagtcggggaaaaccaccgtgaagtggatgtagagcttgcccttcatgaagggcct 379
Query: 692 ctggtaaatcggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttc 751
|||||| || ||||| ||||| ||||| || ||||||||| ||||| || ||||||||
Sbjct: 380 ctggtacatgggcatgccctcgtcgttgatcgccttgaatgaatcaggcttgacaacttc 439
Query: 752 accagggtctgatttgatgagaagctgcctgttgtccagatgtgtaagaacaaattggaa 811
|| |||| || |||||||| ||||| ||| |||| ||| | || ||| |||||||
Sbjct: 440 cccggggttggacttgatgagcagctgtctgccatccaaatgagctaggacatattggaa 499
Query: 812 cccacatagtgcttcggtcagagacaaggtgtgctcatagaagagatcttcaccctttct 871
||||| || || || ||||| | || |||||||||||||||||| || ||| |||| |
Sbjct: 500 gccacagagggcctccgtcagggtcagggtgtgctcatagaagaggtcgtcagccttccg 559
Query: 872 tttgaacttggagtggtccttctgctggaggacgaatacaatgtctccagtaacggtatc 931
||||| |||| ||| |||||||||||||||||||| | ||||||||||| ||||||||
Sbjct: 560 cttgaatttggggtgctccttctgctggaggacgaagattatgtctccagtgacggtatc 619
Query: 932 aggcgcttcatc 943
||||||||||||
Sbjct: 620 aggcgcttcatc 631
Score = 36.2 bits (18), Expect = 3.7
Identities = 33/38 (86%)
Strand = Plus / Plus
Query: 441 ccgcccggcatctcgtcgtcctcctcgtacgcctcctg 478
||||||||||| || |||||||| || || ||||||||
Sbjct: 132 ccgcccggcatatcctcgtcctcgtcataggcctcctg 169
>gb|CA017279.1|CA017279 HV14B22u HV Hordeum vulgare subsp. vulgare cDNA clone HV14B22
3-PRIME, mRNA sequence
Length = 309
Score = 182 bits (92), Expect = 3e-044
Identities = 210/246 (85%), Gaps = 15/246 (6%)
Strand = Plus / Plus
Query: 408 gcttactgttgcgcgcactgcactctctgggctccgcc---cggcatctcgtcgtcctcc 464
|||||||||||||||||||||||||||||||| ||||| ||||||||||||||| |||
Sbjct: 70 gcttactgttgcgcgcactgcactctctgggcaccgcctcccggcatctcgtcgtcgtcc 129
Query: 465 tcgt---acgcctcctgggcagcg---tgagcttgcttcctgcgcatctcttcctcgatg 518
|||| |||||||||| ||||| || |||| ||| |||||||| ||||| |||
Sbjct: 130 tcgtcgtacgcctcctgagcagcagcatgggctt---tccgacgcatctcctcctccatg 186
Query: 519 ttgttcacatcatgcatagtcgtctcctcgcattcatctatctccatgtctgtcagcttg 578
||| ||||||||||| |||||||||||||||||||| | ||||||||| |||||||||
Sbjct: 187 ttg---acatcatgcatcgtcgtctcctcgcattcatcaagctccatgtcagtcagcttg 243
Query: 579 gatgaaggccttggtggaagtactgtctcgagagccttgcactgctctggtgccagcgag 638
|||| |||| |||||||||| || | |||||||||||||||||| || |||||||| |||
Sbjct: 244 gatgcaggctttggtggaagaacggcctcgagagccttgcactgatccggtgccagagag 303
Query: 639 tcgggg 644
||||||
Sbjct: 304 tcgggg 309
>gb|BE194325.1|BE194325 HVSMEh0085C11f Hordeum vulgare 5-45 DAP spike EST library HVcDNA0009
(5 to 45 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEh0085C11f, mRNA sequence
Length = 785
Score = 178 bits (90), Expect = 4e-043
Identities = 180/210 (85%)
Strand = Plus / Minus
Query: 1412 tccaccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacg 1471
|||||||| |||||||| ||||| |||||||| |||||| |||||||||| ||||| ||
Sbjct: 358 tccaccacttcccattccctccttgagggcatcctcaccagactgatcatagatctctcg 299
Query: 1472 tttctctggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtc 1531
|| | ||||||||||| |||||||| || || || |||||||| ||||||||||||||
Sbjct: 298 cttttaaggatcactcaagacctcataagcgtgagctagctccttaaacttctcggggtc 239
Query: 1532 accgcccttgtcggggtggttcttgatagcggccttgcggtaggccttcttgaggtcgtc 1591
||||||| |||||||||||||||||| |||||||| |||||||||||| | ||||||||
Sbjct: 238 gccgccctggtcggggtggttcttgatggcggccttccggtaggccttcattaggtcgtc 179
Query: 1592 ctgggacgccgacttgggcaccccgaggat 1621
|||||||| ||||||||| || |||||
Sbjct: 178 atgggacgcgtccttgggcacgcccaggat 149
>gb|AL504114.1|AL504114 AL504114 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW04D24V 5', mRNA sequence
Length = 700
Score = 176 bits (89), Expect = 2e-042
Identities = 391/493 (79%), Gaps = 1/493 (0%)
Strand = Plus / Minus
Query: 632 cagcgagtcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaagg-cc 690
||||||||||||||| | |||||||| || ||||| ||||| |||||||||||||| ||
Sbjct: 688 cagcgagtcggggaaaccaaccgtgaagtggatgtagagcttgcccttcatgaaagggcc 629
Query: 691 tctggtaaatcggcatcccctcatcgtttattgccttgaattggtcaggtttaacaactt 750
||||||| || ||||| ||||| ||||| || ||||| ||| ||||| || |||||||
Sbjct: 628 tctggtacatgggcatgccctcgtcgttgatcgccttnaatgaatcaggcttgacaactt 569
Query: 751 caccagggtctgatttgatgagaagctgcctgttgtccagatgtgtaagaacaaattgga 810
| || |||| || ||||||| ||||| || |||| ||| | || ||| ||||||
Sbjct: 568 ccccggggttggacntgatgagcagctgtntgccatccaaatgagctaggacatattgga 509
Query: 811 acccacatagtgcttcggtcagagacaaggtgtgctcatagaagagatcttcaccctttc 870
| ||||| || || || ||||| | || |||||| ||||||||||| || || |||| |
Sbjct: 508 agccacagagggcctccgtcagggtcagggtgtgntcatagaagaggtcgtcggccttcc 449
Query: 871 ttttgaacttggagtggtccttctgctggaggacgaatacaatgtctccagtaacggtat 930
||||| |||| ||| |||||||||||||||||||| | ||||||||||| |||||||
Sbjct: 448 gcttgaatttggggtgctccttctgctggaggacgaagattatgtctccagtgacggtat 389
Query: 931 caggcgcttcatcagcttcaccagggaaggtgatcttctggctgtgttgcattcccttct 990
||||||||||||| || || |||||||||||||||||||| | || ||||| ||||| |
Sbjct: 388 caggcgcttcatctgcctctccagggaaggtgatcttctgtccatgctgcatacccttnt 329
Query: 991 caacatgaacctcaagaaccttcttctcctgaacgaccttctcacccttacaccctgggc 1050
| || ||||| || || ||||| || ||||| |||||||||||||| ||| ||
Sbjct: 328 cgaccaccacctccaggactttcttntcgtgaaccaccttctcacccttgcactgcccgc 269
Query: 1051 agcggtccttctcgttgatgctctccccagtccccttgcactcgttgcaaggctgctgca 1110
| || ||||| || ||||| |||| ||| | ||| ||||||| |||| || |||||||
Sbjct: 268 aacgatccttatcactgatggtctcaccacttcccctgcactcantgcagggntgctgca 209
Query: 1111 tctgctgtatcat 1123
| |||||||||||
Sbjct: 208 tttgctgtatcat 196
>gb|AV913207.1|AV913207 AV913207 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags21e09 5', mRNA sequence
Length = 669
Score = 172 bits (87), Expect = 2e-041
Identities = 261/319 (81%)
Strand = Plus / Minus
Query: 805 attggaacccacatagtgcttcggtcagagacaaggtgtgctcatagaagagatcttcac 864
||||||| ||||| || || || ||||| | || |||||||||||||||||| || |||
Sbjct: 661 attggaagccacagagggcctccgtcagggtcagggtgtgctcatagaagaggtcgtcag 602
Query: 865 cctttcttttgaacttggagtggtccttctgctggaggacgaatacaatgtctccagtaa 924
|||| | ||||| |||| ||| |||||||||||||||||||| | ||||||||||| |
Sbjct: 601 ccttccgcttgaatttggggtgctccttctgctggaggacgaagattatgtctccagtga 542
Query: 925 cggtatcaggcgcttcatcagcttcaccagggaaggtgatcttctggctgtgttgcattc 984
||||||||||||||||||| || || |||||||||||||||||||| | || ||||| |
Sbjct: 541 cggtatcaggcgcttcatctgcctcgccagggaaggtgatcttctgtccatgctgcatac 482
Query: 985 ccttctcaacatgaacctcaagaaccttcttctcctgaacgaccttctcacccttacacc 1044
||||||| || ||||| || || |||||||| ||||| |||||||||||||| |||
Sbjct: 481 ccttctcgaccaccacctccaggactttcttctcgtgaaccaccttctcacccttgcact 422
Query: 1045 ctgggcagcggtccttctcgttgatgctctccccagtccccttgcactcgttgcaaggct 1104
||| || ||||| || ||||| |||| ||| | ||| ||||||| ||||| ||||
Sbjct: 421 gcccgcaacgatccttatcactgatggtctcaccacttcccctgcactcattgcagggct 362
Query: 1105 gctgcatctgctgtatcat 1123
||||||| |||||||||||
Sbjct: 361 gctgcatttgctgtatcat 343
Score = 38.2 bits (19), Expect = 0.94
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 1335 cccctgctgcttccaccacctcc 1357
||||||||||| |||||||||||
Sbjct: 131 cccctgctgctgccaccacctcc 109
>gb|BG310064.1|BG310064 HVSMEc0016D22f Hordeum vulgare seedling shoot EST library HVcDNA0003
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEc0016D22f, mRNA sequence
Length = 843
Score = 170 bits (86), Expect = 1e-040
Identities = 142/160 (88%), Gaps = 3/160 (1%)
Strand = Plus / Minus
Query: 1520 cttctcggggtcaccgcccttgtcggggtggttcttgatagcggccttgcggtaggcctt 1579
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 452 cttctcggggtcaccgcccttgtcggggtggttcttgatggcggccttgcggtaggcctt 393
Query: 1580 cttgaggtcgtcctgggacgccgacttgggcaccccgaggatctcatagtacttggtgtt 1639
||||||||||||||||||||| ||||||||| || | |||||| ||||| ||| |
Sbjct: 392 cttgaggtcgtcctgggacgcgtccttgggcacgcccaagatctcgtagtagcgcgtgct 333
Query: 1640 gtcgctcttcttcggcg---cgcgcccgaacatcttgcct 1676
||||||||||||||||| |||| |||||||||| ||||
Sbjct: 332 gtcgctcttcttcggcggcccgcggccgaacatctcgcct 293
>gb|AV918501.1|AV918501 AV918501 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags21e09 3', mRNA sequence
Length = 615
Score = 170 bits (86), Expect = 1e-040
Identities = 251/306 (82%)
Strand = Plus / Plus
Query: 632 cagcgagtcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcct 691
||||||||||||||| |||||||||| || ||||| ||||| ||||||||||| |||||
Sbjct: 310 cagcgagtcggggaaaaccaccgtgaagtggatgtagagcttgcccttcatgaagggcct 369
Query: 692 ctggtaaatcggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttc 751
|||||| || ||||| ||||| ||||| || ||||||||| ||||| || ||||||||
Sbjct: 370 ctggtacatgggcatgccctcgtcgttgatcgccttgaatgaatcaggcttgacaacttc 429
Query: 752 accagggtctgatttgatgagaagctgcctgttgtccagatgtgtaagaacaaattggaa 811
|| |||| || |||||||| ||||| ||| |||| ||| | || ||| |||||||
Sbjct: 430 cccggggttggacttgatgagcagctgtctgccatccaaatgagctaggacatattggaa 489
Query: 812 cccacatagtgcttcggtcagagacaaggtgtgctcatagaagagatcttcaccctttct 871
||||| || || || ||||| | || |||||||||||||||||| || ||| |||| |
Sbjct: 490 gccacagagggcctccgtcagggtcagggtgtgctcatagaagaggtcgtcagccttccg 549
Query: 872 tttgaacttggagtggtccttctgctggaggacgaatacaatgtctccagtaacggtatc 931
||||| |||| ||| |||||||||||||||||||| | ||||||||||| ||||||||
Sbjct: 550 cttgaatttggggtgctccttctgctggaggacgaagattatgtctccagtgacggtatc 609
Query: 932 aggcgc 937
||||||
Sbjct: 610 aggcgc 615
Score = 36.2 bits (18), Expect = 3.7
Identities = 33/38 (86%)
Strand = Plus / Plus
Query: 441 ccgcccggcatctcgtcgtcctcctcgtacgcctcctg 478
||||||||||| || |||||||| || || ||||||||
Sbjct: 122 ccgcccggcatatcctcgtcctcgtcataggcctcctg 159
>gb|CA030030.1|CA030030 HX05O04r HX Hordeum vulgare subsp. vulgare cDNA clone HX05O04
5-PRIME, mRNA sequence
Length = 661
Score = 170 bits (86), Expect = 1e-040
Identities = 142/160 (88%), Gaps = 3/160 (1%)
Strand = Plus / Minus
Query: 1520 cttctcggggtcaccgcccttgtcggggtggttcttgatagcggccttgcggtaggcctt 1579
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 263 cttctcggggtcaccgcccttgtcggggtggttcttgatggcggccttgcggtaggcctt 204
Query: 1580 cttgaggtcgtcctgggacgccgacttgggcaccccgaggatctcatagtacttggtgtt 1639
||||||||||||||||||||| ||||||||| || | |||||| ||||| ||| |
Sbjct: 203 cttgaggtcgtcctgggacgcgtccttgggcacgcccaagatctcgtagtagcgcgtgct 144
Query: 1640 gtcgctcttcttcggcg---cgcgcccgaacatcttgcct 1676
||||||||||||||||| |||| |||||||||| ||||
Sbjct: 143 gtcgctcttcttcggcggcccgcggccgaacatctcgcct 104
>gb|AV913448.1|AV913448 AV913448 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags22b21 5', mRNA sequence
Length = 620
Score = 168 bits (85), Expect = 4e-040
Identities = 235/285 (82%)
Strand = Plus / Minus
Query: 839 ggtgtgctcatagaagagatcttcaccctttcttttgaacttggagtggtccttctgctg 898
|||||||||||||||||| || ||| |||| | ||||| |||| ||| |||||||||||
Sbjct: 614 ggtgtgctcatagaagaggtcgtcagccttccgcttgaatttggggtgctccttctgctg 555
Query: 899 gaggacgaatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaa 958
||||||||| | ||||||||||| |||||||||||||||||||| || || ||||||||
Sbjct: 554 gaggacgaagattatgtctccagtgacggtatcaggcgcttcatctgcctcgccagggaa 495
Query: 959 ggtgatcttctggctgtgttgcattcccttctcaacatgaacctcaagaaccttcttctc 1018
|||||||||||| | || ||||| |||||||| || ||||| || || ||||||||
Sbjct: 494 ggtgatcttctgtccatgctgcatacccttctcgaccaccacctccaggactttcttctc 435
Query: 1019 ctgaacgaccttctcacccttacaccctgggcagcggtccttctcgttgatgctctcccc 1078
||||| |||||||||||||| ||| ||| || ||||| || ||||| |||| ||
Sbjct: 434 gtgaaccaccttctcacccttgcactgcccgcaacgatccttatcactgatggtctcacc 375
Query: 1079 agtccccttgcactcgttgcaaggctgctgcatctgctgtatcat 1123
| | ||| ||||||| ||||| ||||||||||| |||||||||||
Sbjct: 374 acttcccctgcactcattgcagggctgctgcatttgctgtatcat 330
Score = 38.2 bits (19), Expect = 0.94
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 1335 cccctgctgcttccaccacctcc 1357
||||||||||| |||||||||||
Sbjct: 118 cccctgctgctgccaccacctcc 96
>gb|AV913493.1|AV913493 AV913493 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags22e10 5', mRNA sequence
Length = 614
Score = 168 bits (85), Expect = 4e-040
Identities = 235/285 (82%)
Strand = Plus / Minus
Query: 839 ggtgtgctcatagaagagatcttcaccctttcttttgaacttggagtggtccttctgctg 898
|||||||||||||||||| || ||| |||| | ||||| |||| ||| |||||||||||
Sbjct: 603 ggtgtgctcatagaagaggtcgtcagccttccgcttgaatttggggtgctccttctgctg 544
Query: 899 gaggacgaatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaa 958
||||||||| | ||||||||||| |||||||||||||||||||| || || ||||||||
Sbjct: 543 gaggacgaagattatgtctccagtgacggtatcaggcgcttcatctgcctcgccagggaa 484
Query: 959 ggtgatcttctggctgtgttgcattcccttctcaacatgaacctcaagaaccttcttctc 1018
|||||||||||| | || ||||| |||||||| || ||||| || || ||||||||
Sbjct: 483 ggtgatcttctgtccatgctgcatacccttctcgaccaccacctccaggactttcttctc 424
Query: 1019 ctgaacgaccttctcacccttacaccctgggcagcggtccttctcgttgatgctctcccc 1078
||||| |||||||||||||| ||| ||| || ||||| || ||||| |||| ||
Sbjct: 423 gtgaaccaccttctcacccttgcactgcccgcaacgatccttatcactgatggtctcacc 364
Query: 1079 agtccccttgcactcgttgcaaggctgctgcatctgctgtatcat 1123
| | ||| ||||||| ||||| ||||||||||| |||||||||||
Sbjct: 363 acttcccctgcactcattgcagggctgctgcatttgctgtatcat 319
Score = 38.2 bits (19), Expect = 0.94
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 1335 cccctgctgcttccaccacctcc 1357
||||||||||| |||||||||||
Sbjct: 107 cccctgctgctgccaccacctcc 85
>gb|AV923044.1|AV923044 AV923044 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp. vulgare
cDNA clone basd3i03 5', mRNA sequence
Length = 603
Score = 168 bits (85), Expect = 4e-040
Identities = 235/285 (82%)
Strand = Plus / Minus
Query: 839 ggtgtgctcatagaagagatcttcaccctttcttttgaacttggagtggtccttctgctg 898
|||||||||||||||||| || ||| |||| | ||||| |||| ||| |||||||||||
Sbjct: 595 ggtgtgctcatagaagaggtcgtcagccttccgcttgaatttggggtgctccttctgctg 536
Query: 899 gaggacgaatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaa 958
||||||||| | ||||||||||| |||||||||||||||||||| || || ||||||||
Sbjct: 535 gaggacgaagattatgtctccagtgacggtatcaggcgcttcatctgcctcgccagggaa 476
Query: 959 ggtgatcttctggctgtgttgcattcccttctcaacatgaacctcaagaaccttcttctc 1018
|||||||||||| | || ||||| |||||||| || ||||| || || ||||||||
Sbjct: 475 ggtgatcttctgtccatgctgcatacccttctcgaccaccacctccaggactttcttctc 416
Query: 1019 ctgaacgaccttctcacccttacaccctgggcagcggtccttctcgttgatgctctcccc 1078
||||| |||||||||||||| ||| ||| || ||||| || ||||| |||| ||
Sbjct: 415 gtgaaccaccttctcacccttgcactgcccgcaacgatccttatcactgatggtctcacc 356
Query: 1079 agtccccttgcactcgttgcaaggctgctgcatctgctgtatcat 1123
| | ||| ||||||| ||||| ||||||||||| |||||||||||
Sbjct: 355 acttcccctgcactcattgcagggctgctgcatttgctgtatcat 311
Score = 38.2 bits (19), Expect = 0.94
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 1335 cccctgctgcttccaccacctcc 1357
||||||||||| |||||||||||
Sbjct: 99 cccctgctgctgccaccacctcc 77
>gb|AV931194.1|AV931194 AV931194 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd18o07 3', mRNA sequence
Length = 651
Score = 168 bits (85), Expect = 4e-040
Identities = 257/313 (82%), Gaps = 1/313 (0%)
Strand = Plus / Plus
Query: 632 cagcgagtcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcct 691
||||||||||||||| |||||||||| || ||||| ||||| ||||||||||| |||||
Sbjct: 335 cagcgagtcggggaaaaccaccgtgaagtggatgtagagcttgcccttcatgaagggcct 394
Query: 692 ctggtaaatcggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttc 751
|||||| || ||||| ||||| ||||| || ||||||||| ||||| || ||||||||
Sbjct: 395 ctggtacatgggcatgccctcgtcgttgatcgccttgaatgaatcaggcttgacaacttc 454
Query: 752 accagggtctgatttgatgagaagctgcctgttgtccagatgtgtaagaacaaattggaa 811
|| |||| || |||||||| ||||| ||| |||| ||| | || ||| |||||||
Sbjct: 455 cccggggttggacttgatgagcagctgtctgccatccaaatgagctaggacatattggaa 514
Query: 812 cccacatagtgct-tcggtcagagacaaggtgtgctcatagaagagatcttcaccctttc 870
||||| || || || ||||| | || |||||||||||||||||| || ||| |||| |
Sbjct: 515 gccacagagggccctccgtcagggtcagggtgtgctcatagaagaggtcgtcagccttcc 574
Query: 871 ttttgaacttggagtggtccttctgctggaggacgaatacaatgtctccagtaacggtat 930
||||| |||| ||| |||||||||||||||||||| | ||||||||||| |||||||
Sbjct: 575 gcttgaatttggggtgctccttctgctggaggacgaagattatgtctccagtgacggtat 634
Query: 931 caggcgcttcatc 943
|||||||||||||
Sbjct: 635 caggcgcttcatc 647
Score = 36.2 bits (18), Expect = 3.7
Identities = 33/38 (86%)
Strand = Plus / Plus
Query: 441 ccgcccggcatctcgtcgtcctcctcgtacgcctcctg 478
||||||||||| || |||||||| || || ||||||||
Sbjct: 147 ccgcccggcatatcctcgtcctcgtcataggcctcctg 184
>gb|BM442619.2|BM442619 EBan01_SQ003_L01_R anther, yellow stage, no treatment, cv Optic,
EBan01 Hordeum vulgare subsp. vulgare cDNA clone
EBan01_SQ003_L01 5', mRNA sequence
Length = 324
Score = 168 bits (85), Expect = 4e-040
Identities = 256/313 (81%)
Strand = Plus / Minus
Query: 651 accgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatcggcatcccc 710
|||||||| || ||||| ||||| ||||||||||| ||||||||||| || ||||| |||
Sbjct: 313 accgtgaagtggatgtagagcttgcccttcatgaagggcctctggtacatgggcatgccc 254
Query: 711 tcatcgtttattgccttgaattggtcaggtttaacaacttcaccagggtctgatttgatg 770
|| ||||| || ||||||||| ||||| || |||||||| || |||| || ||||||
Sbjct: 253 tcgtcgttgatcgccttgaatgaatcaggcttgacaacttccccggggttggacttgatg 194
Query: 771 agaagctgcctgttgtccagatgtgtaagaacaaattggaacccacatagtgcttcggtc 830
|| ||||| ||| |||| ||| | || ||| ||||||| ||||| || || || |||
Sbjct: 193 agcagctgtctgccatccaaatgagctaggacatattggaagccacagagggcctccgtc 134
Query: 831 agagacaaggtgtgctcatagaagagatcttcaccctttcttttgaacttggagtggtcc 890
|| | || |||||||||||||||||| || || |||| | ||||| |||| ||| |||
Sbjct: 133 agggtcagggtgtgctcatagaagaggtcgtcggccttccgcttgaatttggggtgctcc 74
Query: 891 ttctgctggaggacgaatacaatgtctccagtaacggtatcaggcgcttcatcagcttca 950
||||||||||||||||| | ||||||||||| |||||||||||||||||||| || ||
Sbjct: 73 ttctgctggaggacgaagattatgtctccagtgacggtatcaggcgcttcatctgcctct 14
Query: 951 ccagggaaggtga 963
|||||||||||||
Sbjct: 13 ccagggaaggtga 1
>gb|BM370320.2|BM370320 EBro08_SQ003_N09_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ003_N09 5', mRNA sequence
Length = 686
Score = 165 bits (83), Expect = 6e-039
Identities = 260/319 (81%)
Strand = Plus / Minus
Query: 805 attggaacccacatagtgcttcggtcagagacaaggtgtgctcatagaagagatcttcac 864
||||||| ||||| || || || ||||| | || |||||||||||||||||| || ||
Sbjct: 608 attggaagccacagagggcctccgtcagggtcagggtgtgctcatagaagaggtcgtcgg 549
Query: 865 cctttcttttgaacttggagtggtccttctgctggaggacgaatacaatgtctccagtaa 924
|||| | ||||| |||| ||| |||||||||||||||||||| | ||||||||||| |
Sbjct: 548 ccttccgcttgaatttggggtgctccttctgctggaggacgaagattatgtctccagtga 489
Query: 925 cggtatcaggcgcttcatcagcttcaccagggaaggtgatcttctggctgtgttgcattc 984
||||||||||||||||||| || || |||||||||||||||||||| | || ||||| |
Sbjct: 488 cggtatcaggcgcttcatctgcctctccagggaaggtgatcttctgtccatgctgcatac 429
Query: 985 ccttctcaacatgaacctcaagaaccttcttctcctgaacgaccttctcacccttacacc 1044
||||||| || ||||| || || |||||||| ||||| |||||||||||||| |||
Sbjct: 428 ccttctcgaccaccacctccaggactttcttctcgtgaaccaccttctcacccttgcact 369
Query: 1045 ctgggcagcggtccttctcgttgatgctctccccagtccccttgcactcgttgcaaggct 1104
||| || ||||| || ||||| |||| ||| | ||| ||||||| ||||| ||||
Sbjct: 368 gcccgcaacgatccttatcactgatggtctcaccacttcccctgcactcattgcagggct 309
Query: 1105 gctgcatctgctgtatcat 1123
||||||| |||||||||||
Sbjct: 308 gctgcatttgctgtatcat 290
Score = 38.2 bits (19), Expect = 0.94
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 1335 cccctgctgcttccaccacctcc 1357
||||||||||| |||||||||||
Sbjct: 78 cccctgctgctgccaccacctcc 56
>gb|BQ754039.1|BQ754039 EBca01_SQ002_K06_R carpel, pre-anthesis, no treatment, cv Optic,
EBca01 Hordeum vulgare subsp. vulgare cDNA clone
EBca01_SQ002_K06 5', mRNA sequence
Length = 297
Score = 165 bits (83), Expect = 6e-039
Identities = 142/161 (88%), Gaps = 3/161 (1%)
Strand = Plus / Minus
Query: 1520 cttctcggggtcaccgcccttgtcggggtggttcttgatagcggccttgcggtaggcctt 1579
|||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 250 cttctcggggtcgccgcctttgtcggggtggttcttgatggcggccttgcggtaggcctt 191
Query: 1580 cttgaggtcgtcctgggacgccgacttgggcaccccgaggatctcatagtacttggtgtt 1639
||||||||||||||||||||| ||||||||| || |||||||| ||||| ||| |
Sbjct: 190 cttgaggtcgtcctgggacgcgtccttgggcacgcccaggatctcgtagtagcgcgtgct 131
Query: 1640 gtcgctcttcttcggcg---cgcgcccgaacatcttgcctt 1677
||||||||||||||||| |||| |||||||||| |||||
Sbjct: 130 gtcgctcttcttcggcggcccgcggccgaacatctcgcctt 90
>gb|BQ763089.1|BQ763089 EBro02_SQ007_L03_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ007_L03 5', mRNA sequence
Length = 463
Score = 163 bits (82), Expect = 2e-038
Identities = 200/236 (84%), Gaps = 15/236 (6%)
Strand = Plus / Minus
Query: 408 gcttactgttgcgcgcactgcactctctgggctccgcc---cggcatctcgtcgtc---c 461
|||||||||||||||||||||||||||||||| ||||| ||||||||||||||| |
Sbjct: 234 gcttactgttgcgcgcactgcactctctgggcaccgcctcccggcatctcgtcgtcgccc 175
Query: 462 tcctcgtacgcctcctgggcagcg---tgagcttgcttcctgcgcatctcttcctcgatg 518
|| |||||||||||||| ||||| || |||| ||| |||||||| ||||| |||
Sbjct: 174 tcgtcgtacgcctcctgagcagcagcatgggctt---tccgacgcatctcctcctccatg 118
Query: 519 ttgttcacatcatgcatagtcgtctcctcgcattcatctatctccatgtctgtcagcttg 578
||| ||||||||||| ||||||||||||||||| || | ||||||||| |||||||||
Sbjct: 117 ttg---acatcatgcatcgtcgtctcctcgcattcgtcaagctccatgtcagtcagcttg 61
Query: 579 gatgaaggccttggtggaagtactgtctcgagagccttgcactgctctggtgccag 634
|||| |||| |||||||||| || | |||||||||||||||||| || ||||||||
Sbjct: 60 gatgcaggctttggtggaagaacggcctcgagagccttgcactgatccggtgccag 5
>gb|CB859966.1|CB859966 HI12C19w HI Hordeum vulgare subsp. vulgare cDNA clone HI12C19
3-PRIME, mRNA sequence
Length = 661
Score = 163 bits (82), Expect = 2e-038
Identities = 276/341 (80%)
Strand = Plus / Plus
Query: 603 gtctcgagagccttgcactgctctggtgccagcgagtcggggaactccaccgtgaaatga 662
|||||||| ||||||||||| || | ||||||||||||||| | |||||||| ||
Sbjct: 320 gtctcgagggccttgcactggtccaggctcagcgagtcggggaaaacaaccgtgaagtgg 379
Query: 663 atgtacagcttccccttcatgaaaggcctctggtaaatcggcatcccctcatcgtttatt 722
||||| ||||| ||||||||||| ||||||||||| || ||||| ||||| ||||| ||
Sbjct: 380 atgtagagcttgcccttcatgaagggcctctggtacatgggcatgccctcgtcgttgatc 439
Query: 723 gccttgaattggtcaggtttaacaacttcaccagggtctgatttgatgagaagctgcctg 782
||||||||| ||||| || |||||||| || |||| || |||||||| ||||| |||
Sbjct: 440 gccttgaatgaatcaggcttgacaacttccccggggttggacttgatgagcagctgtctg 499
Query: 783 ttgtccagatgtgtaagaacaaattggaacccacatagtgcttcggtcagagacaaggtg 842
|||| ||| | || ||| ||||||| ||||| || || || ||||| | || ||||
Sbjct: 500 ccatccaaatgagctaggacatattggaagccacagagggcctccgtcagggtcagggtg 559
Query: 843 tgctcatagaagagatcttcaccctttcttttgaacttggagtggtccttctgctggagg 902
|||||||||||||| || || |||| | ||||| ||| ||| |||||||||||||||
Sbjct: 560 tgctcatagaagaggtcgtcggccttccgcttgaatntggggtgctccttctgctggagg 619
Query: 903 acgaatacaatgtctccagtaacggtatcaggcgcttcatc 943
||||| | ||||||||||| ||||||||||||||||||||
Sbjct: 620 acgaagattatgtctccagtgacggtatcaggcgcttcatc 660
Score = 36.2 bits (18), Expect = 3.7
Identities = 33/38 (86%)
Strand = Plus / Plus
Query: 441 ccgcccggcatctcgtcgtcctcctcgtacgcctcctg 478
||||||||||| || |||||||| || || ||||||||
Sbjct: 161 ccgcccggcatatcctcgtcctcgtcataggcctcctg 198
>gb|AV918750.1|AV918750 AV918750 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags22b21 3', mRNA sequence
Length = 640
Score = 161 bits (81), Expect = 9e-038
Identities = 256/313 (81%), Gaps = 1/313 (0%)
Strand = Plus / Plus
Query: 632 cagcgagtcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcct 691
||||||||||||||| |||||||||| || ||||| ||||| ||||||||||| |||||
Sbjct: 319 cagcgagtcggggaaaaccaccgtgaagtggatgtagagcttgcccttcatgaagggcct 378
Query: 692 ctggtaaatcggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttc 751
|||||| || ||||| ||||| ||||| || ||||||||| ||||| || ||||||||
Sbjct: 379 ctggtacatgggcatgccctcgtcgttgatcgccttgaatgaatcaggcttgacaacttc 438
Query: 752 accagggtctgatttgatgagaagctgcctgttgtccagatgtgtaagaacaaattggaa 811
|| |||| || |||||||| ||||| ||| |||| ||| | || ||| |||||||
Sbjct: 439 cccggggttggacttgatgagcagctgtctgccatccaaatgagctaggacatattggaa 498
Query: 812 cccacatagtg-cttcggtcagagacaaggtgtgctcatagaagagatcttcaccctttc 870
||||| || | | || ||||| | || ||||||||||||||||| || ||| |||| |
Sbjct: 499 gccacagagggccctccgtcagggtcagggtgtgctcatagaagaagtcgtcagccttcc 558
Query: 871 ttttgaacttggagtggtccttctgctggaggacgaatacaatgtctccagtaacggtat 930
||||| |||| ||| |||||||||||||||||||| | ||||||||||| |||||||
Sbjct: 559 gcttgaatttggggtgctccttctgctggaggacgaagattatgtctccagtgacggtat 618
Query: 931 caggcgcttcatc 943
|||||||||||||
Sbjct: 619 caggcgcttcatc 631
Score = 36.2 bits (18), Expect = 3.7
Identities = 33/38 (86%)
Strand = Plus / Plus
Query: 441 ccgcccggcatctcgtcgtcctcctcgtacgcctcctg 478
||||||||||| || |||||||| || || ||||||||
Sbjct: 131 ccgcccggcatatcctcgtcctcgtcataggcctcctg 168
>gb|AV926156.1|AV926156 AV926156 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp. vulgare
cDNA clone basd18f02 5', mRNA sequence
Length = 675
Score = 159 bits (80), Expect = 4e-037
Identities = 261/320 (81%), Gaps = 1/320 (0%)
Strand = Plus / Minus
Query: 805 attggaacccacatagtgcttcggtcagagacaaggtgtgctcatagaagagatcttcac 864
||||||| ||||| || || || ||||| | || |||||||||||||||||| || |||
Sbjct: 630 attggaagccacagagggcctccgtcagggtcagggtgtgctcatagaagaggtcgtcag 571
Query: 865 cctttcttttgaacttggagtggtccttctgctggaggacgaataca-atgtctccagta 923
|||| | ||||| |||| ||| |||||||||||||||||||| | |||||||||||
Sbjct: 570 ccttccgcttgaatttggggtgctccttctgctggaggacgaagaattatgtctccagtg 511
Query: 924 acggtatcaggcgcttcatcagcttcaccagggaaggtgatcttctggctgtgttgcatt 983
|||||||||||||||||||| || || |||||||||||||||||||| | || |||||
Sbjct: 510 acggtatcaggcgcttcatctgcctcgccagggaaggtgatcttctgtccatgctgcata 451
Query: 984 cccttctcaacatgaacctcaagaaccttcttctcctgaacgaccttctcacccttacac 1043
|||||||| || ||||| || || |||||||| ||||| |||||||||||||| |||
Sbjct: 450 cccttctcgaccaccacctccaggactttcttctcgtgaaccaccttctcacccttgcac 391
Query: 1044 cctgggcagcggtccttctcgttgatgctctccccagtccccttgcactcgttgcaaggc 1103
||| || ||||| || ||||| |||| ||| | ||| ||||||| ||||| |||
Sbjct: 390 tgcccgcaacgatccttatcactgatggtctcaccacttcccctgcactcattgcagggc 331
Query: 1104 tgctgcatctgctgtatcat 1123
|||||||| |||||||||||
Sbjct: 330 tgctgcatttgctgtatcat 311
Score = 38.2 bits (19), Expect = 0.94
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 1335 cccctgctgcttccaccacctcc 1357
||||||||||| |||||||||||
Sbjct: 99 cccctgctgctgccaccacctcc 77
>gb|AL510900.1|AL510900 AL510900 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY06F15u 3',
mRNA sequence
Length = 494
Score = 155 bits (78), Expect = 6e-036
Identities = 187/220 (85%), Gaps = 15/220 (6%)
Strand = Plus / Plus
Query: 410 ttactgttgcgcgcactgcactctctgggctccg---cccggcatc---tcgtcgtcctc 463
|||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||
Sbjct: 252 ttactgttgcgcgcactgcactctctgggcaccgcctcccggcatctcgtcgtcgtcctc 311
Query: 464 ctcgtacgcctcctgggcagcgtgagcttg---cttcctgcgcatctcttcctcgatgtt 520
|||||||||||||| ||||| ||| || |||| |||||||| ||||| |||||
Sbjct: 312 gtcgtacgcctcctgagcagc---agcatgggctttccgacgcatctcctcctccatgtt 368
Query: 521 gttcacatcatgcatagtcgtctcctcgcattcatctatctccatgtctgtcagcttgga 580
| ||||||||||| |||||||||||||||||||| | ||||||||| |||||||||||
Sbjct: 369 g---acatcatgcatcgtcgtctcctcgcattcatcaagctccatgtcagtcagcttgga 425
Query: 581 tgaaggccttggtggaagtactgtctcgagagccttgcac 620
|| |||| |||||||||| || | ||||||||||||||||
Sbjct: 426 tgcaggctttggtggaagaacggcctcgagagccttgcac 465
>gb|AV914052.1|AV914052 AV914052 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags4g04 5', mRNA sequence
Length = 577
Score = 155 bits (78), Expect = 6e-036
Identities = 235/286 (82%), Gaps = 1/286 (0%)
Strand = Plus / Minus
Query: 839 ggtgtgctcatagaagagatcttcaccctttcttttgaacttggagtggtccttctgctg 898
|||||||||||||||||| || ||| |||| | ||||| |||| ||| |||||||||||
Sbjct: 565 ggtgtgctcatagaagaggtcgtcagccttccgcttgaatttggggtgctccttctgctg 506
Query: 899 gaggacgaataca-atgtctccagtaacggtatcaggcgcttcatcagcttcaccaggga 957
||||||||| | ||||||||||| |||||||||||||||||||| || || |||||||
Sbjct: 505 gaggacgaagaattatgtctccagtgacggtatcaggcgcttcatctgcctcgccaggga 446
Query: 958 aggtgatcttctggctgtgttgcattcccttctcaacatgaacctcaagaaccttcttct 1017
||||||||||||| | || ||||| |||||||| || ||||| || || |||||||
Sbjct: 445 aggtgatcttctgtccatgctgcatacccttctcgaccaccacctccaggactttcttct 386
Query: 1018 cctgaacgaccttctcacccttacaccctgggcagcggtccttctcgttgatgctctccc 1077
| ||||| |||||||||||||| ||| ||| || ||||| || ||||| |||| |
Sbjct: 385 cgtgaaccaccttctcacccttgcactgcccgcaacgatccttatcactgatggtctcac 326
Query: 1078 cagtccccttgcactcgttgcaaggctgctgcatctgctgtatcat 1123
|| | ||| ||||||| ||||| ||||||||||| |||||||||||
Sbjct: 325 cacttcccctgcactcattgcagggctgctgcatttgctgtatcat 280
Score = 38.2 bits (19), Expect = 0.94
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 1335 cccctgctgcttccaccacctcc 1357
||||||||||| |||||||||||
Sbjct: 68 cccctgctgctgccaccacctcc 46
>gb|BM374239.2|BM374239 EBpi03_SQ003_B01_R pistil, 4 DPA, no treatment, cv Optic, EBpi03
Hordeum vulgare subsp. vulgare cDNA clone
EBpi03_SQ003_B01 5', mRNA sequence
Length = 480
Score = 151 bits (76), Expect = 9e-035
Identities = 197/234 (84%), Gaps = 15/234 (6%)
Strand = Plus / Minus
Query: 408 gcttactgttgcgcgcactgcactctctgggctccgcc---cggcatctcgtcgtc---c 461
|||||||||||||||||||||||||||||||| ||||| |||||||| |||||| |
Sbjct: 228 gcttactgttgcgcgcactgcactctctgggcaccgcctcccggcatcttgtcgtcgccc 169
Query: 462 tcctcgtacgcctcctgggcagcg---tgagcttgcttcctgcgcatctcttcctcgatg 518
|| |||||||||||||| ||||| || |||| ||| |||||||| ||||| |||
Sbjct: 168 tcgtcgtacgcctcctgagcagcagcatgggctt---tccgacgcatctcctcctccatg 112
Query: 519 ttgttcacatcatgcatagtcgtctcctcgcattcatctatctccatgtctgtcagcttg 578
||| ||||||||||| ||||||||||||||||| || | ||||||||| |||||||||
Sbjct: 111 ttg---acatcatgcatcgtcgtctcctcgcattcgtcaagctccatgtcagtcagcttg 55
Query: 579 gatgaaggccttggtggaagtactgtctcgagagccttgcactgctctggtgcc 632
|||| |||| |||||||||| || | |||||||||||||||||| || ||||||
Sbjct: 54 gatgcaggctttggtggaagaacggcctcgagagccttgcactgatccggtgcc 1
>gb|CA024539.1|CA024539 HZ49J12r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ49J12
5-PRIME, mRNA sequence
Length = 468
Score = 147 bits (74), Expect = 1e-033
Identities = 234/286 (81%), Gaps = 1/286 (0%)
Strand = Plus / Minus
Query: 839 ggtgtgctcatagaagagatcttcaccctttcttttgaacttggagtggtccttctgctg 898
|||||||||||| ||||| || || |||| | ||||| |||| ||| |||||||||||
Sbjct: 440 ggtgtgctcataaaagaggtcgtcggccttccgcttgaatttggggtgctccttctgctg 381
Query: 899 gaggacgaatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaa 958
||||||||| | ||||||||||| |||||||||||||||||||| || || ||||||||
Sbjct: 380 gaggacgaagattatgtctccagtgacggtatcaggcgcttcatctgcctctccagggaa 321
Query: 959 ggtgatcttctggctgt-gttgcattcccttctcaacatgaacctcaagaaccttcttct 1017
|||||||||||| | | ||||||| |||||||| || ||||| || || |||||||
Sbjct: 320 ggtgatcttctgtccatagttgcatacccttctcgaccaccacctccaggactttcttct 261
Query: 1018 cctgaacgaccttctcacccttacaccctgggcagcggtccttctcgttgatgctctccc 1077
| ||||| |||||||||||||| ||| ||| || ||||| || ||||| |||| |
Sbjct: 260 cgtgaaccaccttctcacccttgcactgcccgcaacgatccttatcactgatggtctcac 201
Query: 1078 cagtccccttgcactcgttgcaaggctgctgcatctgctgtatcat 1123
|| | ||| ||||||| ||||| ||||||||||| |||||||||||
Sbjct: 200 cacttcccgtgcactcattgcagggctgctgcatttgctgtatcat 155
>gb|AL508070.1|AL508070 AL508070 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY07L02V 5',
mRNA sequence
Length = 555
Score = 141 bits (71), Expect = 9e-032
Identities = 180/213 (84%), Gaps = 15/213 (7%)
Strand = Plus / Plus
Query: 408 gcttactgttgcgcgcactgcactctctgggctccgcc---cggcatctcgtcgtcctcc 464
|||||||||||||||||||||||||||||||| ||||| ||||||||||||||| |||
Sbjct: 349 gcttactgttgcgcgcactgcactctctgggcaccgcctcccggcatctcgtcgtcgtcc 408
Query: 465 tcgt---acgcctcctgggcagcg---tgagcttgcttcctgcgcatctcttcctcgatg 518
|||| |||||||||| ||||| || |||| ||| |||||||| ||||| |||
Sbjct: 409 tcgtcgtacgcctcctgagcagcagcatgggctt---tccgacgcatctcctcctccatg 465
Query: 519 ttgttcacatcatgcatagtcgtctcctcgcattcatctatctccatgtctgtcagcttg 578
||| ||||||||||| |||||||||||||||||||| | ||||||||| |||||||||
Sbjct: 466 ttg---acatcatgcatcgtcgtctcctcgcattcatcaagctccatgtcagtcagcttg 522
Query: 579 gatgaaggccttggtggaagtactgtctcgaga 611
|||| |||| |||||||||| || | |||||||
Sbjct: 523 gatgcaggctttggtggaagaacggcctcgaga 555
>gb|AV936347.1|AV936347 AV936347 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal10p23 3', mRNA sequence
Length = 595
Score = 139 bits (70), Expect = 3e-031
Identities = 223/274 (81%)
Strand = Plus / Plus
Query: 632 cagcgagtcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcct 691
||||||||||||||| |||||||||| || ||||| ||||| ||||||||||| |||||
Sbjct: 322 cagcgagtcggggaaaaccaccgtgaagtggatgtagagcttgcccttcatgaagggcct 381
Query: 692 ctggtaaatcggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttc 751
|||||| || ||||| ||||| ||||| || ||||||||| ||||| || ||||||||
Sbjct: 382 ctggtacatgggcatgccctcgtcgttgatcgccttgaatgaatcaggcttgacaacttc 441
Query: 752 accagggtctgatttgatgagaagctgcctgttgtccagatgtgtaagaacaaattggaa 811
|| |||| || |||||||| ||||| ||| |||| ||| | || ||| |||||||
Sbjct: 442 cccggggttggacttgatgagcagctgtctgccatccaaatgagctaggacatattggaa 501
Query: 812 cccacatagtgcttcggtcagagacaaggtgtgctcatagaagagatcttcaccctttct 871
||||| || || || ||||| | || |||||||||||||||||| || ||| |||| |
Sbjct: 502 gccacagagggcctccgtcagggtcagggtgtgctcatagaagaggtcgtcagccttccg 561
Query: 872 tttgaacttggagtggtccttctgctggaggacg 905
||||| |||| ||| ||||||||||||||||||
Sbjct: 562 cttgaatttggggtgctccttctgctggaggacg 595
Score = 36.2 bits (18), Expect = 3.7
Identities = 33/38 (86%)
Strand = Plus / Plus
Query: 441 ccgcccggcatctcgtcgtcctcctcgtacgcctcctg 478
||||||||||| || |||||||| || || ||||||||
Sbjct: 134 ccgcccggcatatcctcgtcctcgtcataggcctcctg 171
>gb|BJ548534.1|BJ548534 BJ548534 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal29p02 3', mRNA sequence
Length = 576
Score = 139 bits (70), Expect = 3e-031
Identities = 223/274 (81%)
Strand = Plus / Plus
Query: 632 cagcgagtcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcct 691
||||||||||||||| |||||||||| || ||||| ||||| ||||||||||| |||||
Sbjct: 303 cagcgagtcggggaaaaccaccgtgaagtggatgtagagcttgcccttcatgaagggcct 362
Query: 692 ctggtaaatcggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttc 751
|||||| || ||||| ||||| ||||| || ||||||||| ||||| || ||||||||
Sbjct: 363 ctggtacatgggcatgccctcgtcgttgatcgccttgaatgaatcaggcttgacaacttc 422
Query: 752 accagggtctgatttgatgagaagctgcctgttgtccagatgtgtaagaacaaattggaa 811
|| |||| || |||||||| ||||| ||| |||| ||| | || ||| |||||||
Sbjct: 423 cccggggttggacttgatgagcagctgtctgccatccaaatgagctaggacatattggaa 482
Query: 812 cccacatagtgcttcggtcagagacaaggtgtgctcatagaagagatcttcaccctttct 871
||||| || || || ||||| | || |||||||||||||||||| || ||| |||| |
Sbjct: 483 gccacagagggcctccgtcagggtcagggtgtgctcatagaagaggtcgtcagccttccg 542
Query: 872 tttgaacttggagtggtccttctgctggaggacg 905
||||| |||| ||| ||||||||||||||||||
Sbjct: 543 cttgaatttggggtgctccttctgctggaggacg 576
Score = 36.2 bits (18), Expect = 3.7
Identities = 33/38 (86%)
Strand = Plus / Plus
Query: 441 ccgcccggcatctcgtcgtcctcctcgtacgcctcctg 478
||||||||||| || |||||||| || || ||||||||
Sbjct: 115 ccgcccggcatatcctcgtcctcgtcataggcctcctg 152
>gb|AL510456.1|AL510456 AL510456 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY04P20u 3',
mRNA sequence
Length = 642
Score = 131 bits (66), Expect = 8e-029
Identities = 191/227 (84%), Gaps = 18/227 (7%)
Strand = Plus / Plus
Query: 408 gcttactgttgcgcgcactgcactctctgggctccgcc---cggcatctcgtcgtcctcc 464
|||||||||||||||||||||||||||||||| ||||| ||||||||||||||| |||
Sbjct: 323 gcttactgttgcgcgcactgcactctctgggcaccgcctcccggcatctcgtcgtcgtcc 382
Query: 465 tcgt---acgcctcctgggcagcg---tgagcttgcttcctgcgcatctcttcctcgatg 518
|||| |||||||||| ||||| || |||| ||| |||||||| ||||| |||
Sbjct: 383 tcgtcgtacgcctcctgagcagcagcatgggctt---tccgacgcatctcctcctccatg 439
Query: 519 ttgttcacatca-tgcatagtcgtctcctcgcattcatctatctccatgtctgtcagctt 577
||| |||||| ||||| |||||||||||||||||||| | ||||||||| ||||||||
Sbjct: 440 ttg---acatcaatgcatcgtcgtctcctcgcattcatcaagctccatgtcagtcagctt 496
Query: 578 ggatgaaggccttggtgg--aagtactgtctcgagagccttgcactg 622
||||| |||| ||||||| ||| || | ||||||||||||||||||
Sbjct: 497 ggatgcaggctttggtgggaaagaacgggctcgagagccttgcactg 543
>gb|BJ548460.1|BJ548460 BJ548460 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal25k12 3', mRNA sequence
Length = 584
Score = 131 bits (66), Expect = 8e-029
Identities = 219/270 (81%)
Strand = Plus / Plus
Query: 632 cagcgagtcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcct 691
||||||||||||||| |||||||||| || ||||| ||||| ||||||||||| |||||
Sbjct: 315 cagcgagtcggggaaaaccaccgtgaagtggatgtagagcttgcccttcatgaagggcct 374
Query: 692 ctggtaaatcggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttc 751
|||||| || ||||| ||||| ||||| || ||||||||| ||||| || ||||||||
Sbjct: 375 ctggtacatgggcatgccctcgtcgttgatcgccttgaatgaatcaggcttgacaacttc 434
Query: 752 accagggtctgatttgatgagaagctgcctgttgtccagatgtgtaagaacaaattggaa 811
|| |||| || |||||||| ||||| ||| |||| ||| | || ||| |||||||
Sbjct: 435 cccggggttggacttgatgagcagctgtctgccatccaaatgagctaggacatattggaa 494
Query: 812 cccacatagtgcttcggtcagagacaaggtgtgctcatagaagagatcttcaccctttct 871
||||| || || || ||||| | || |||||||||||||||||| || ||| |||| |
Sbjct: 495 gccacagagggcctccgtcagggtcagggtgtgctcatagaagaggtcgtcagccttccg 554
Query: 872 tttgaacttggagtggtccttctgctggag 901
||||| |||| ||| ||||||||||||||
Sbjct: 555 cttgaatttggggtgctccttctgctggag 584
Score = 36.2 bits (18), Expect = 3.7
Identities = 33/38 (86%)
Strand = Plus / Plus
Query: 441 ccgcccggcatctcgtcgtcctcctcgtacgcctcctg 478
||||||||||| || |||||||| || || ||||||||
Sbjct: 127 ccgcccggcatatcctcgtcctcgtcataggcctcctg 164
>gb|AV935440.1|AV935440 AV935440 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal4d04 3', mRNA sequence
Length = 575
Score = 129 bits (65), Expect = 3e-028
Identities = 218/269 (81%)
Strand = Plus / Plus
Query: 632 cagcgagtcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcct 691
||||||||||||||| |||||||||| || ||||| ||||| ||||||||||| |||||
Sbjct: 307 cagcgagtcggggaaaaccaccgtgaagtggatgtagagcttgcccttcatgaagggcct 366
Query: 692 ctggtaaatcggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttc 751
|||||| || ||||| ||||| ||||| || ||||||||| ||||| || ||||||||
Sbjct: 367 ctggtacatgggcatgccctcgtcgttgatcgccttgaatgaatcaggcttgacaacttc 426
Query: 752 accagggtctgatttgatgagaagctgcctgttgtccagatgtgtaagaacaaattggaa 811
|| |||| || |||||||| ||||| ||| |||| ||| | || ||| |||||||
Sbjct: 427 cccggggttggacttgatgagcagctgtctgccatccaaatgagctaggacatattggaa 486
Query: 812 cccacatagtgcttcggtcagagacaaggtgtgctcatagaagagatcttcaccctttct 871
||||| || || || ||||| | || |||||||||||||||||| || ||| |||| |
Sbjct: 487 gccacagagggcctccgtcagggtcagggtgtgctcatagaagaggtcgtcagccttccg 546
Query: 872 tttgaacttggagtggtccttctgctgga 900
||||| |||| ||| |||||||||||||
Sbjct: 547 cttgaatttggggtgctccttctgctgga 575
Score = 36.2 bits (18), Expect = 3.7
Identities = 33/38 (86%)
Strand = Plus / Plus
Query: 441 ccgcccggcatctcgtcgtcctcctcgtacgcctcctg 478
||||||||||| || |||||||| || || ||||||||
Sbjct: 119 ccgcccggcatatcctcgtcctcgtcataggcctcctg 156
>gb|CB876590.1|CB876590 HX11M05w HX Hordeum vulgare subsp. vulgare cDNA clone HX11M05
3-PRIME, mRNA sequence
Length = 447
Score = 125 bits (63), Expect = 5e-027
Identities = 166/197 (84%), Gaps = 15/197 (7%)
Strand = Plus / Plus
Query: 408 gcttactgttgcgcgcactgcactctctgggctccgcc---cggcatctcgtcgtcctcc 464
|||||||||||||||||||| ||||||||||| ||||| ||||||||||||||| |||
Sbjct: 257 gcttactgttgcgcgcactgtactctctgggcaccgcctcccggcatctcgtcgtcgtcc 316
Query: 465 tcgt---acgcctcctgggcagcg---tgagcttgcttcctgcgcatctcttcctcgatg 518
|||| |||||||||| ||||| || |||| ||| |||||||| ||||| |||
Sbjct: 317 tcgtcgtacgcctcctgagcagcagcatgggctt---tccgacgcatctcctcctccatg 373
Query: 519 ttgttcacatcatgcatagtcgtctcctcgcattcatctatctccatgtctgtcagcttg 578
||| ||||||||||| |||||||||||||||||||| | ||||||||| |||||||||
Sbjct: 374 ttg---acatcatgcatcgtcgtctcctcgcattcatcaagctccatgtcagtcagcttg 430
Query: 579 gatgaaggccttggtgg 595
|||| |||| |||||||
Sbjct: 431 gatgcaggctttggtgg 447
>gb|AV923699.1|AV923699 AV923699 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp. vulgare
cDNA clone basd1b08 5', mRNA sequence
Length = 536
Score = 123 bits (62), Expect = 2e-026
Identities = 185/226 (81%)
Strand = Plus / Minus
Query: 898 ggaggacgaatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccaggga 957
|||||||||| | ||||||||||| |||||||||||||||||||| || || |||||||
Sbjct: 536 ggaggacgaagattatgtctccagtgacggtatcaggcgcttcatctgcctcgccaggga 477
Query: 958 aggtgatcttctggctgtgttgcattcccttctcaacatgaacctcaagaaccttcttct 1017
||||||||||||| | || ||||| |||||||| || ||||| || || |||||||
Sbjct: 476 aggtgatcttctgtccatgctgcatacccttctcgaccaccacctccaggactttcttct 417
Query: 1018 cctgaacgaccttctcacccttacaccctgggcagcggtccttctcgttgatgctctccc 1077
| ||||| |||||||||||||| ||| ||| || ||||| || ||||| |||| |
Sbjct: 416 cgtgaaccaccttctcacccttgcactgcccgcaacgatccttatcactgatggtctcac 357
Query: 1078 cagtccccttgcactcgttgcaaggctgctgcatctgctgtatcat 1123
|| | ||| ||||||| ||||| ||||||||||| |||||||||||
Sbjct: 356 cacttcccctgcactcattgcagggctgctgcatttgctgtatcat 311
Score = 38.2 bits (19), Expect = 0.94
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 1335 cccctgctgcttccaccacctcc 1357
||||||||||| |||||||||||
Sbjct: 99 cccctgctgctgccaccacctcc 77
>gb|CA027461.1|CA027461 HZ58P24r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ58P24
5-PRIME, mRNA sequence
Length = 429
Score = 123 bits (62), Expect = 2e-026
Identities = 101/114 (88%)
Strand = Plus / Minus
Query: 1412 tccaccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacg 1471
||||||||| |||||||| ||||| |||||||| ||||||||||||||||| ||||| ||
Sbjct: 124 tccaccacctcccattccctccttgagggcatcctcaccatactgatcatagatctctcg 65
Query: 1472 tttctctggatcactcaaaacctcataggcttgtgcgagctccttgaacttctc 1525
||||| ||||||||||| |||||||| || || || |||||||||||||||||
Sbjct: 64 cttctcaggatcactcaagacctcataagcctgagctagctccttgaacttctc 11
Score = 38.2 bits (19), Expect = 0.94
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 1335 cccctgctgcttccaccacctcc 1357
||||||||||| |||||||||||
Sbjct: 204 cccctgctgctgccaccacctcc 182
>gb|BJ547884.1|BJ547884 BJ547884 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal38p02 5', mRNA sequence
Length = 210
Score = 121 bits (61), Expect = 8e-026
Identities = 129/152 (84%)
Strand = Plus / Minus
Query: 888 tccttctgctggaggacgaatacaatgtctccagtaacggtatcaggcgcttcatcagct 947
||||||||||| |||||||| | ||||||||||| |||||||||||||||||||| ||
Sbjct: 202 tccttctgctgnaggacgaagattatgtctccagtgacggtatcaggcgcttcatctgcc 143
Query: 948 tcaccagggaaggtgatcttctggctgtgttgcattcccttctcaacatgaacctcaaga 1007
|| |||||||||||||||||||| | || ||||| |||||||| || ||||| ||
Sbjct: 142 tcgccagggaaggtgatcttctgtccatgctgcatacccttctcgaccaccacctccagg 83
Query: 1008 accttcttctcctgaacgaccttctcaccctt 1039
|| |||||||| ||||| ||||||||||||||
Sbjct: 82 actttcttctcgtgaaccaccttctcaccctt 51
>gb|BJ548050.1|BJ548050 BJ548050 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal17h10 3', mRNA sequence
Length = 583
Score = 121 bits (61), Expect = 8e-026
Identities = 214/265 (80%)
Strand = Plus / Plus
Query: 632 cagcgagtcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcct 691
||||||||||||||| |||||||||| || ||||| ||||| ||||||||||| |||||
Sbjct: 319 cagcgagtcggggaaaaccaccgtgaagtggatgtagagcttgcccttcatgaagggcct 378
Query: 692 ctggtaaatcggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttc 751
|||||| || ||||| ||||| ||||| || ||||||||| ||||| || ||||||||
Sbjct: 379 ctggtacatgggcatgccctcgtcgttgatcgccttgaatgaatcaggcttgacaacttc 438
Query: 752 accagggtctgatttgatgagaagctgcctgttgtccagatgtgtaagaacaaattggaa 811
|| |||| || |||||||| ||||| ||| |||| ||| | || ||| |||||||
Sbjct: 439 cccggggttggacttgatgagcagctgtctgccatccaaatgagctaggacatattggaa 498
Query: 812 cccacatagtgcttcggtcagagacaaggtgtgctcatagaagagatcttcaccctttct 871
||||| || || || ||||| | || |||||||||||||||||| || ||| |||| |
Sbjct: 499 gccacagagggcctccgtcagggtcagggtgtgctcatagaagaggtcgtcagccttccg 558
Query: 872 tttgaacttggagtggtccttctgc 896
||||| |||| ||| |||||||||
Sbjct: 559 cttgaatttggggtgctccttctgc 583
Score = 36.2 bits (18), Expect = 3.7
Identities = 33/38 (86%)
Strand = Plus / Plus
Query: 441 ccgcccggcatctcgtcgtcctcctcgtacgcctcctg 478
||||||||||| || |||||||| || || ||||||||
Sbjct: 131 ccgcccggcatatcctcgtcctcgtcataggcctcctg 168
>gb|CB877624.1|CB877624 HP05J18T HP Hordeum vulgare subsp. vulgare cDNA clone HP05J18
5-PRIME, mRNA sequence
Length = 660
Score = 121 bits (61), Expect = 8e-026
Identities = 127/145 (87%), Gaps = 3/145 (2%)
Strand = Plus / Minus
Query: 1412 tccaccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacg 1471
||||||||| |||||||| ||||| |||||||| ||||||||||||||||| ||||| ||
Sbjct: 152 tccaccacctcccattccctccttgagggcatcctcaccatactgatcatagatctctcg 93
Query: 1472 tttctctggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtc 1531
||||| ||||||||||| |||||||| || || || ||||||||| ||||||| |||||
Sbjct: 92 cttctcaggatcactcaagacctcataagcctgagctagctccttg-acttctc-gggtc 35
Query: 1532 accgcccttgtcggggtggttcttg 1556
||||||||||| |||||||||||
Sbjct: 34 gccgcccttgtc-aggtggttcttg 11
Score = 119 bits (60), Expect = 3e-025
Identities = 174/212 (82%)
Strand = Plus / Minus
Query: 912 atgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatcttctgg 971
||||||||||| |||||||||||||||||||| || || ||||||||||||||||||||
Sbjct: 655 atgtctccagtgacggtatcaggcgcttcatctgcctctccagggaaggtgatcttctgt 596
Query: 972 ctgtgttgcattcccttctcaacatgaacctcaagaaccttcttctcctgaacgaccttc 1031
| || ||||| |||||||| || ||||| || || |||||||| ||||| ||||||
Sbjct: 595 ccatgctgcatacccttctcgaccaccacctccaggactttcttctcgtgaaccaccttc 536
Query: 1032 tcacccttacaccctgggcagcggtccttctcgttgatgctctccccagtccccttgcac 1091
|||||||| ||| ||| || ||||| || ||||| |||| ||| | ||| |||||
Sbjct: 535 tcacccttgcactgcccgcaacgatccttatcactgatggtctcaccacttcccctgcac 476
Query: 1092 tcgttgcaaggctgctgcatctgctgtatcat 1123
|| ||||| ||||||||||| |||||||||||
Sbjct: 475 tcattgcagggctgctgcatttgctgtatcat 444
Score = 38.2 bits (19), Expect = 0.94
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 1335 cccctgctgcttccaccacctcc 1357
||||||||||| |||||||||||
Sbjct: 232 cccctgctgctgccaccacctcc 210
>gb|BJ448413.1|BJ448413 BJ448413 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak19n20 5', mRNA sequence
Length = 509
Score = 119 bits (60), Expect = 3e-025
Identities = 135/160 (84%)
Strand = Plus / Minus
Query: 805 attggaacccacatagtgcttcggtcagagacaaggtgtgctcatagaagagatcttcac 864
||||||| ||||| || || || ||||| | || |||||||||||||||||| || ||
Sbjct: 193 attggaagccacagagggcctccgtcagggtcagggtgtgctcatagaagaggtcgtcgg 134
Query: 865 cctttcttttgaacttggagtggtccttctgctggaggacgaatacaatgtctccagtaa 924
|||| | ||||| |||| ||| |||||||||||||||||||| | ||||||||||| |
Sbjct: 133 ccttccgcttgaatttggggtgctccttctgctggaggacgaagattatgtctccagtga 74
Query: 925 cggtatcaggcgcttcatcagcttcaccagggaaggtgat 964
||||||||||||||||||| || || ||||||||||||||
Sbjct: 73 cggtatcaggcgcttcatctgcctctccagggaaggtgat 34
Score = 89.7 bits (45), Expect = 3e-016
Identities = 108/129 (83%)
Strand = Plus / Minus
Query: 603 gtctcgagagccttgcactgctctggtgccagcgagtcggggaactccaccgtgaaatga 662
|||||||| ||||||||||| || | ||||||||||||||| | |||||||| ||
Sbjct: 484 gtctcgagggccttgcactggtccaggctcagcgagtcggggaaaacaaccgtgaagtgg 425
Query: 663 atgtacagcttccccttcatgaaaggcctctggtaaatcggcatcccctcatcgtttatt 722
||||| ||||| ||||||||||| ||||||||||| || ||||| ||||| ||||| ||
Sbjct: 424 atgtagagcttgcccttcatgaagggcctctggtacatgggcatgccctcgtcgttgatc 365
Query: 723 gccttgaat 731
|||||||||
Sbjct: 364 gccttgaat 356
>gb|BJ549392.1|BJ549392 BJ549392 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags33e03 5', mRNA sequence
Length = 535
Score = 119 bits (60), Expect = 3e-025
Identities = 174/212 (82%)
Strand = Plus / Minus
Query: 912 atgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatcttctgg 971
||||||||||| |||||||||||||||||||| || || ||||||||||||||||||||
Sbjct: 521 atgtctccagtgacggtatcaggcgcttcatctgcctcgccagggaaggtgatcttctgt 462
Query: 972 ctgtgttgcattcccttctcaacatgaacctcaagaaccttcttctcctgaacgaccttc 1031
| || ||||| |||||||| || ||||| || || |||||||| ||||| ||||||
Sbjct: 461 ccatgctgcatacccttctcgaccaccacctccaggactttcttctcgtgaaccaccttc 402
Query: 1032 tcacccttacaccctgggcagcggtccttctcgttgatgctctccccagtccccttgcac 1091
|||||||| ||| ||| || ||||| || ||||| |||| ||| | ||| |||||
Sbjct: 401 tcacccttgcactgcccgcaacgatccttatcactgatggtctcaccacttcccctgcac 342
Query: 1092 tcgttgcaaggctgctgcatctgctgtatcat 1123
|| ||||| ||||||||||| |||||||||||
Sbjct: 341 tcattgcagggctgctgcatttgctgtatcat 310
Score = 38.2 bits (19), Expect = 0.94
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 1335 cccctgctgcttccaccacctcc 1357
||||||||||| |||||||||||
Sbjct: 98 cccctgctgctgccaccacctcc 76
>gb|AV936006.1|AV936006 AV936006 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal7i04 3', mRNA sequence
Length = 589
Score = 115 bits (58), Expect = 5e-024
Identities = 218/270 (80%), Gaps = 1/270 (0%)
Strand = Plus / Plus
Query: 632 cagcgagtcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcct 691
||||||||||||||| |||||||||| || ||||| ||||| ||||||||||| |||||
Sbjct: 320 cagcgagtcggggaaaaccaccgtgaagtggatgtagagcttgcccttcatgaagggcct 379
Query: 692 ctggtaaatcggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttc 751
|||||| || ||||| ||||| ||||| || ||||||||| ||||| || ||||||||
Sbjct: 380 ctggtacatgggcatgccctcgtcgttgatcgccttgaatgaatcaggcttgacaacttc 439
Query: 752 accagggtctgatttgatgagaagctgcctgttgtccagatgtgtaagaacaaattggaa 811
|| |||| || |||||||| ||||| ||| |||| ||| | || ||| |||||||
Sbjct: 440 cccggggttggacttgatgagcagctgtctgccatccaaatgagctaggacatattggaa 499
Query: 812 cccacatagtg-cttcggtcagagacaaggtgtgctcatagaagagatcttcaccctttc 870
||||| || | | || ||||| | || |||||||||||||||||| || ||| |||| |
Sbjct: 500 gccacagagggccctccgtcagggtcagggtgtgctcatagaagaggtcgtcagccttcc 559
Query: 871 ttttgaacttggagtggtccttctgctgga 900
||||| |||| ||| |||||||||||||
Sbjct: 560 gcttgaatttggggtgctccttctgctgga 589
Score = 36.2 bits (18), Expect = 3.7
Identities = 33/38 (86%)
Strand = Plus / Plus
Query: 441 ccgcccggcatctcgtcgtcctcctcgtacgcctcctg 478
||||||||||| || |||||||| || || ||||||||
Sbjct: 132 ccgcccggcatatcctcgtcctcgtcataggcctcctg 169
>gb|AV929735.1|AV929735 AV929735 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd16f23 3', mRNA sequence
Length = 571
Score = 113 bits (57), Expect = 2e-023
Identities = 183/225 (81%)
Strand = Plus / Plus
Query: 632 cagcgagtcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcct 691
||||||||||||||| |||||||||| || ||||| ||||| ||||||||||| |||||
Sbjct: 337 cagcgagtcggggaaaaccaccgtgaagtggatgtagagcttgcccttcatgaagggcct 396
Query: 692 ctggtaaatcggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttc 751
|||||| || ||||| ||||| ||||| || ||||||||| ||||| || ||||||||
Sbjct: 397 ctggtacatgggcatgccctcgtcgttgatcgccttgaatgaatcaggcttgacaacttc 456
Query: 752 accagggtctgatttgatgagaagctgcctgttgtccagatgtgtaagaacaaattggaa 811
|| |||| || |||||||| ||||| ||| |||| ||| | || ||| |||||||
Sbjct: 457 cccggggttggacttgatgagcagctgtctgccatccaaatgagctaggacatattggaa 516
Query: 812 cccacatagtgcttcggtcagagacaaggtgtgctcatagaagag 856
||||| || || || ||||| | || ||||||||||||||||||
Sbjct: 517 gccacagagggcctccgtcagggtcagggtgtgctcatagaagag 561
Score = 36.2 bits (18), Expect = 3.7
Identities = 33/38 (86%)
Strand = Plus / Plus
Query: 441 ccgcccggcatctcgtcgtcctcctcgtacgcctcctg 478
||||||||||| || |||||||| || || ||||||||
Sbjct: 149 ccgcccggcatatcctcgtcctcgtcataggcctcctg 186
>gb|AV917803.1|AV917803 AV917803 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags11j11 3', mRNA sequence
Length = 568
Score = 111 bits (56), Expect = 8e-023
Identities = 182/224 (81%)
Strand = Plus / Plus
Query: 632 cagcgagtcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcct 691
||||||||||||||| |||||||||| || ||||| ||||| ||||||||||| |||||
Sbjct: 303 cagcgagtcggggaaaaccaccgtgaagtggatgtagagcttgcccttcatgaagggcct 362
Query: 692 ctggtaaatcggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttc 751
|||||| || ||||| ||||| ||||| || ||||||||| ||||| || ||||||||
Sbjct: 363 ctggtacatgggcatgccctcgtcgttgatcgccttgaatgaatcaggcttgacaacttc 422
Query: 752 accagggtctgatttgatgagaagctgcctgttgtccagatgtgtaagaacaaattggaa 811
|| |||| || |||||||| ||||| ||| |||| ||| | || ||| |||||||
Sbjct: 423 cccggggttggacttgatgagcagctgtctgccatccaaatgagctaggacatattggaa 482
Query: 812 cccacatagtgcttcggtcagagacaaggtgtgctcatagaaga 855
||||| || || || ||||| | || |||||||||||||||||
Sbjct: 483 gccacagagggcctccgtcagggtcagggtgtgctcatagaaga 526
Score = 36.2 bits (18), Expect = 3.7
Identities = 33/38 (86%)
Strand = Plus / Plus
Query: 441 ccgcccggcatctcgtcgtcctcctcgtacgcctcctg 478
||||||||||| || |||||||| || || ||||||||
Sbjct: 115 ccgcccggcatatcctcgtcctcgtcataggcctcctg 152
>gb|BJ458979.1|BJ458979 BJ458979 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak34c22 3', mRNA sequence
Length = 591
Score = 107 bits (54), Expect = 1e-021
Identities = 204/254 (80%)
Strand = Plus / Plus
Query: 603 gtctcgagagccttgcactgctctggtgccagcgagtcggggaactccaccgtgaaatga 662
|||||||| ||||||||||| || | ||||||||||||||| | |||||||| ||
Sbjct: 296 gtctcgagggccttgcactggtccaggctcagcgagtcggggaaaacaaccgtgaagtgg 355
Query: 663 atgtacagcttccccttcatgaaaggcctctggtaaatcggcatcccctcatcgtttatt 722
||||| ||||| ||||||||||| ||||||||||| || ||||| ||||| ||||| ||
Sbjct: 356 atgtagagcttgcccttcatgaagggcctctggtacatgggcatgccctcgtcgttgatc 415
Query: 723 gccttgaattggtcaggtttaacaacttcaccagggtctgatttgatgagaagctgcctg 782
||||||||| ||||| || |||||||| || |||| || |||||||| ||||| |||
Sbjct: 416 gccttgaatgaatcaggcttgacaacttccccggggttggacttgatgagcagctgtctg 475
Query: 783 ttgtccagatgtgtaagaacaaattggaacccacatagtgcttcggtcagagacaaggtg 842
|||| ||| | || ||| ||||||| ||||| || || || ||||| | || ||||
Sbjct: 476 ccatccaaatgagctaggacatattggaagccacagagggcctccgtcagggtcagggtg 535
Query: 843 tgctcatagaagag 856
||||||||||||||
Sbjct: 536 tgctcatagaagag 549
Score = 48.1 bits (24), Expect = 0.001
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 411 tactgttgcgcgcactgcactctctgggctccgcccggcatctcgtcgtcctcctcgtac 470
||||| || ||||||||||| ||||| | ||||||||||| || |||||||| || ||
Sbjct: 107 tactgctgggcgcactgcaccctctgcccgccgcccggcatatcctcgtcctcgtcatag 166
Query: 471 gcctcctg 478
||||||||
Sbjct: 167 gcctcctg 174
>gb|BF065913.3|BF065913 HV_CEb0014F12f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0014F12f, mRNA sequence
Length = 417
Score = 101 bits (51), Expect = 8e-020
Identities = 114/135 (84%)
Strand = Plus / Minus
Query: 805 attggaacccacatagtgcttcggtcagagacaaggtgtgctcatagaagagatcttcac 864
||||||| ||||| || || || ||||| | || |||||||||||||||||| || |||
Sbjct: 135 attggaagccacagagggcctccgtcagggtcagggtgtgctcatagaagaggtcgtcag 76
Query: 865 cctttcttttgaacttggagtggtccttctgctggaggacgaatacaatgtctccagtaa 924
|||| | ||||| |||| ||| |||||||||||||||||||| | ||||||||||| |
Sbjct: 75 ccttccgcttgaatttggggtgctccttctgctggaggacgaagattatgtctccagtga 16
Query: 925 cggtatcaggcgctt 939
|||||||||||||||
Sbjct: 15 cggtatcaggcgctt 1
Score = 87.7 bits (44), Expect = 1e-015
Identities = 86/100 (86%)
Strand = Plus / Minus
Query: 632 cagcgagtcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcct 691
||||||||||||||| |||||||||| || ||||| ||||| ||||||||||| |||||
Sbjct: 397 cagcgagtcggggaaaaccaccgtgaagtggatgtagagcttgcccttcatgaagggcct 338
Query: 692 ctggtaaatcggcatcccctcatcgtttattgccttgaat 731
||||| || ||||| ||||| ||||| || |||||||||
Sbjct: 337 atggtacatgggcatgccctcgtcgttgatcgccttgaat 298
>gb|AV919081.1|AV919081 AV919081 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags4g04 3', mRNA sequence
Length = 573
Score = 101 bits (51), Expect = 8e-020
Identities = 218/271 (80%), Gaps = 2/271 (0%)
Strand = Plus / Plus
Query: 632 cagcgagtcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcct 691
||||||||||||||| |||||||||| || ||||| ||||| ||||||||||| |||||
Sbjct: 303 cagcgagtcggggaaaaccaccgtgaagtggatgtagagcttgcccttcatgaagggcct 362
Query: 692 ctggtaaatcggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttc 751
|||||| || ||||| ||||| ||||| || ||||||||| ||||| || ||||||||
Sbjct: 363 ctggtacatgggcatgccctcgtcgttgatcgccttgaatgaatcaggcttgacaacttc 422
Query: 752 accagggtctgatttgatgagaagctgcctgttgtccagatgtgtaagaacaaattggaa 811
|| |||| || |||||||| ||||| ||| |||| ||| | || ||| |||||||
Sbjct: 423 cccggggttggacttgatgagcagctgtctgccatccaaatgagctaggacatattggaa 482
Query: 812 cccacatagtgct-tcggtcagagacaaggtgtgctcatagaagagatcttcaccctttc 870
||||| || || || ||||| | || |||||||||||||||||| || ||| |||| |
Sbjct: 483 gccacagagggccctccgtcagggtcagggtgtgctcatagaagaggtcgtcagccttcc 542
Query: 871 ttttgaa-cttggagtggtccttctgctgga 900
||||| |||| ||| |||||||||||||
Sbjct: 543 gcttgaattttggggtgctccttctgctgga 573
Score = 36.2 bits (18), Expect = 3.7
Identities = 33/38 (86%)
Strand = Plus / Plus
Query: 441 ccgcccggcatctcgtcgtcctcctcgtacgcctcctg 478
||||||||||| || |||||||| || || ||||||||
Sbjct: 115 ccgcccggcatatcctcgtcctcgtcataggcctcctg 152
>gb|AV921881.1|AV921881 AV921881 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags13o20 3', mRNA sequence
Length = 644
Score = 101 bits (51), Expect = 8e-020
Identities = 123/147 (83%)
Strand = Plus / Plus
Query: 632 cagcgagtcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcct 691
||||||||||||||| |||||||||| || ||||| ||||| ||||||||||| |||||
Sbjct: 371 cagcgagtcggggaaaaccaccgtgaagtggatgtagagcttgcccttcatgaagggcct 430
Query: 692 ctggtaaatcggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttc 751
|||||| || ||||| ||||| ||||| || ||||||||| ||||| || ||||||||
Sbjct: 431 ctggtacatgggcatgccctcgtcgttgatcgccttgaatgaatcaggcttgacaacttc 490
Query: 752 accagggtctgatttgatgagaagctg 778
|| |||| || |||||||| |||||
Sbjct: 491 cccggggttggacttgatgagcagctg 517
Score = 36.2 bits (18), Expect = 3.7
Identities = 33/38 (86%)
Strand = Plus / Plus
Query: 441 ccgcccggcatctcgtcgtcctcctcgtacgcctcctg 478
||||||||||| || |||||||| || || ||||||||
Sbjct: 183 ccgcccggcatatcctcgtcctcgtcataggcctcctg 220
>gb|BJ549059.1|BJ549059 BJ549059 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal41i05 3', mRNA sequence
Length = 489
Score = 101 bits (51), Expect = 8e-020
Identities = 123/147 (83%)
Strand = Plus / Plus
Query: 632 cagcgagtcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcct 691
||||||||||||||| |||||||||| || ||||| ||||| ||||||||||| |||||
Sbjct: 302 cagcgagtcggggaaaaccaccgtgaagtggatgtagagcttgcccttcatgaagggcct 361
Query: 692 ctggtaaatcggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttc 751
|||||| || ||||| ||||| ||||| || ||||||||| ||||| || ||||||||
Sbjct: 362 ctggtacatgggcatgccctcgtcgttgatcgccttgaatgaatcaggcttgacaacttc 421
Query: 752 accagggtctgatttgatgagaagctg 778
|| |||| || |||||||| |||||
Sbjct: 422 cccggggttggacttgatgagcagctg 448
Score = 36.2 bits (18), Expect = 3.7
Identities = 33/38 (86%)
Strand = Plus / Plus
Query: 441 ccgcccggcatctcgtcgtcctcctcgtacgcctcctg 478
||||||||||| || |||||||| || || ||||||||
Sbjct: 114 ccgcccggcatatcctcgtcctcgtcataggcctcctg 151
>gb|AJ435921.1|AJ435921 AJ435921 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200077F12F1, mRNA sequence
Length = 476
Score = 95.6 bits (48), Expect = 5e-018
Identities = 87/100 (87%)
Strand = Plus / Minus
Query: 632 cagcgagtcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcct 691
||||||||||||||| |||||||||| || ||||| ||||| ||||||||||| |||||
Sbjct: 113 cagcgagtcggggaaaaccaccgtgaagtggatgtagagcttgcccttcatgaagggcct 54
Query: 692 ctggtaaatcggcatcccctcatcgtttattgccttgaat 731
|||||| || ||||| ||||| ||||| || |||||||||
Sbjct: 53 ctggtacatgggcatgccctcgtcgttgatcgccttgaat 14
Score = 36.2 bits (18), Expect = 3.7
Identities = 33/38 (86%)
Strand = Plus / Minus
Query: 441 ccgcccggcatctcgtcgtcctcctcgtacgcctcctg 478
||||||||||| || |||||||| || || ||||||||
Sbjct: 301 ccgcccggcatatcctcgtcctcgtcataggcctcctg 264
>gb|BI781165.2|BI781165 EBma03_SQ001_K06_R maternal, 8 DPA, no treatment, cv Optic, EBma03
Hordeum vulgare subsp. vulgare cDNA clone
EBma03_SQ001_K06 5', mRNA sequence
Length = 518
Score = 95.6 bits (48), Expect = 5e-018
Identities = 144/176 (81%)
Strand = Plus / Minus
Query: 603 gtctcgagagccttgcactgctctggtgccagcgagtcggggaactccaccgtgaaatga 662
|||||||| ||||||||||| || | ||||||||||||||| | |||||||| ||
Sbjct: 212 gtctcgagggccttgcactggtccaggctcagcgagtcggggaaaacaaccgtgaagtgg 153
Query: 663 atgtacagcttccccttcatgaaaggcctctggtaaatcggcatcccctcatcgtttatt 722
||||| ||||| ||||||||||| ||||||||||| || ||||| ||||| ||||| ||
Sbjct: 152 atgtagagcttgcccttcatgaagggcctctggtacatgggcatgccctcgtcgttgatc 93
Query: 723 gccttgaattggtcaggtttaacaacttcaccagggtctgatttgatgagaagctg 778
||||||||| ||||| || |||||||| || |||| || |||||||| |||||
Sbjct: 92 gccttgaatgaatcaggcttgacaacttccccggggttggacttgatgagcagctg 37
Score = 36.2 bits (18), Expect = 3.7
Identities = 33/38 (86%)
Strand = Plus / Minus
Query: 441 ccgcccggcatctcgtcgtcctcctcgtacgcctcctg 478
||||||||||| || |||||||| || || ||||||||
Sbjct: 338 ccgcccggcatatcctcgtcctcgtcataggcctcctg 301
>gb|BU999535.1|BU999535 HI14M21r HI Hordeum vulgare subsp. vulgare cDNA clone HI14M21
5-PRIME, mRNA sequence
Length = 558
Score = 95.6 bits (48), Expect = 5e-018
Identities = 144/176 (81%)
Strand = Plus / Minus
Query: 603 gtctcgagagccttgcactgctctggtgccagcgagtcggggaactccaccgtgaaatga 662
|||||||| ||||||||||| || | ||||||||||||||| | |||||||| ||
Sbjct: 203 gtctcgagggccttgcactggtccaggctcagcgagtcggggaaaacaaccgtgaagtgg 144
Query: 663 atgtacagcttccccttcatgaaaggcctctggtaaatcggcatcccctcatcgtttatt 722
||||| ||||| ||||||||||| ||||||||||| || ||||| ||||| ||||| ||
Sbjct: 143 atgtagagcttgcccttcatgaagggcctctggtacatgggcatgccctcgtcgttgatc 84
Query: 723 gccttgaattggtcaggtttaacaacttcaccagggtctgatttgatgagaagctg 778
||||||||| ||||| || |||||||| || |||| || |||||||| |||||
Sbjct: 83 gccttgaatgaatcaggcttgacaacttccccggggttggacttgatgagcagctg 28
Score = 36.2 bits (18), Expect = 3.7
Identities = 33/38 (86%)
Strand = Plus / Minus
Query: 441 ccgcccggcatctcgtcgtcctcctcgtacgcctcctg 478
||||||||||| || |||||||| || || ||||||||
Sbjct: 362 ccgcccggcatatcctcgtcctcgtcataggcctcctg 325
>gb|CB874739.1|CB874739 HX06C21w HX Hordeum vulgare subsp. vulgare cDNA clone HX06C21
3-PRIME, mRNA sequence
Length = 542
Score = 95.6 bits (48), Expect = 5e-018
Identities = 144/176 (81%)
Strand = Plus / Plus
Query: 603 gtctcgagagccttgcactgctctggtgccagcgagtcggggaactccaccgtgaaatga 662
|||||||| ||||||||||| || | ||||||||||||||| | |||||||| ||
Sbjct: 320 gtctcgagggccttgcactggtccaggctcagcgagtcggggaaaacaaccgtgaagtgg 379
Query: 663 atgtacagcttccccttcatgaaaggcctctggtaaatcggcatcccctcatcgtttatt 722
||||| ||||| ||||||||||| ||||||||||| || ||||| ||||| ||||| ||
Sbjct: 380 atgtagagcttgcccttcatgaagggcctctggtacatgggcatgccctcgtcgttgatc 439
Query: 723 gccttgaattggtcaggtttaacaacttcaccagggtctgatttgatgagaagctg 778
||||||||| ||||| || |||||||| || |||| || |||||||| |||||
Sbjct: 440 gccttgaatgaatcaggcttgacaacttccccggggttggacttgatgagcagctg 495
Score = 36.2 bits (18), Expect = 3.7
Identities = 33/38 (86%)
Strand = Plus / Plus
Query: 441 ccgcccggcatctcgtcgtcctcctcgtacgcctcctg 478
||||||||||| || |||||||| || || ||||||||
Sbjct: 161 ccgcccggcatatcctcgtcctcgtcataggcctcctg 198
>gb|BQ756054.1|BQ756054 EBem05_SQ001_H16_R embryo, 14 DPA, no treatment, cv Optic, EBem05
Hordeum vulgare subsp. vulgare cDNA clone
EBem05_SQ001_H16 5', mRNA sequence
Length = 335
Score = 93.7 bits (47), Expect = 2e-017
Identities = 146/179 (81%)
Strand = Plus / Minus
Query: 600 actgtctcgagagccttgcactgctctggtgccagcgagtcggggaactccaccgtgaaa 659
||||||||||| ||||||||||| || | ||||||||||||||| | ||||||||
Sbjct: 221 actgtctcgagggccttgcactggtccaggctcagcgagtcggggaaaacaaccgtgaag 162
Query: 660 tgaatgtacagcttccccttcatgaaaggcctctggtaaatcggcatcccctcatcgttt 719
|| ||||| ||||| ||||||||||| ||||| ||||| || ||||| ||||| |||||
Sbjct: 161 tggatgtagagcttgcccttcatgaagggcctgtggtacatgggcatgccctcgtcgttg 102
Query: 720 attgccttgaattggtcaggtttaacaacttcaccagggtctgatttgatgagaagctg 778
|| ||||||||| ||||| || |||||||| || |||| || |||||||| |||||
Sbjct: 101 atcgccttgaatgaatcaggcttgacaacttccccggggttggacttgatgagcagctg 43
>gb|AV925669.1|AV925669 AV925669 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp. vulgare
cDNA clone basd25f09 5', mRNA sequence
Length = 458
Score = 91.7 bits (46), Expect = 7e-017
Identities = 158/196 (80%)
Strand = Plus / Minus
Query: 928 tatcaggcgcttcatcagcttcaccagggaaggtgatcttctggctgtgttgcattccct 987
||||||||||||||| || || |||||||||||||||||||| | || ||||| ||||
Sbjct: 458 tatcaggcgcttcatntgcctcgccagggaaggtgatcttctgtccatgntgcataccct 399
Query: 988 tctcaacatgaacctcaagaaccttcttctcctgaacgaccttctcacccttacaccctg 1047
|||| || ||||| || || |||||||| ||||| |||||||||||||| |||
Sbjct: 398 tctcgaccaccacctccaggactttcttctcgtgaaccaccttctcacccttgcactgcc 339
Query: 1048 ggcagcggtccttctcgttgatgctctccccagtccccttgcactcgttgcaaggctgct 1107
||| || ||||| || ||||| |||| ||| | ||| ||||||| ||||| |||||||
Sbjct: 338 cgcaacgatccttatcactgatggtctcaccacttcccctgcactcattgcagggctgct 279
Query: 1108 gcatctgctgtatcat 1123
|||| |||||||||||
Sbjct: 278 gcatttgctgtatcat 263
Score = 38.2 bits (19), Expect = 0.94
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 1335 cccctgctgcttccaccacctcc 1357
||||||||||| |||||||||||
Sbjct: 51 cccctgctgctgccaccacctcc 29
>gb|BF262852.2|BF262852 HV_CEa0005C06f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0005C06f, mRNA sequence
Length = 900
Score = 89.7 bits (45), Expect = 3e-016
Identities = 86/100 (86%)
Strand = Plus / Minus
Query: 632 cagcgagtcggggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcct 691
|||||||| |||||| |||||||||| || ||||| ||||| ||||||||||| |||||
Sbjct: 141 cagcgagtnggggaaaaccaccgtgaagtggatgtagagcttgcccttcatgaagggcct 82
Query: 692 ctggtaaatcggcatcccctcatcgtttattgccttgaat 731
|||||| || ||||| ||||| ||||| || |||||||||
Sbjct: 81 ctggtacatgggcatgccctcgtcgttgatcgccttgaat 42
>gb|AJ436123.1|AJ436123 AJ436123 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200007F12F1, mRNA sequence
Length = 368
Score = 89.7 bits (45), Expect = 3e-016
Identities = 130/155 (83%), Gaps = 15/155 (9%)
Strand = Plus / Minus
Query: 408 gcttactgttgcgcgcactgcactctctgggctccg---cccggcatc---tcgtcgtcc 461
|||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||
Sbjct: 160 gcttactgttgcgcgcactgcactctctgggcaccgcctcccggcatctcgtcgtcgtcc 101
Query: 462 tcctcgtacgcctcctgggcagcgtgagcttg---cttcctgcgcatctcttcctcgatg 518
|| |||||||||||||| ||||| ||| || |||| |||||||| ||||| |||
Sbjct: 100 tcgtcgtacgcctcctgagcagc---agcatgggctttccgacgcatctcctcctccatg 44
Query: 519 ttgttcacatcatgcatagtcgtctcctcgcattc 553
||| ||||||||||| |||||||||||||||||
Sbjct: 43 ttg---acatcatgcatcgtcgtctcctcgcattc 12
>gb|BJ456136.1|BJ456136 BJ456136 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak19n20 3', mRNA sequence
Length = 595
Score = 89.7 bits (45), Expect = 3e-016
Identities = 108/129 (83%)
Strand = Plus / Plus
Query: 603 gtctcgagagccttgcactgctctggtgccagcgagtcggggaactccaccgtgaaatga 662
|||||||| ||||||||||| || | ||||||||||||||| | |||||||| ||
Sbjct: 334 gtctcgagggccttgcactggtccaggctcagcgagtcggggaaaacaaccgtgaagtgg 393
Query: 663 atgtacagcttccccttcatgaaaggcctctggtaaatcggcatcccctcatcgtttatt 722
||||| ||||| ||||||||||| ||||||||||| || ||||| ||||| ||||| ||
Sbjct: 394 atgtagagcttgcccttcatgaagggcctctggtacatgggcatgccctcgtcgttgatc 453
Query: 723 gccttgaat 731
|||||||||
Sbjct: 454 gccttgaat 462
Score = 48.1 bits (24), Expect = 0.001
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 411 tactgttgcgcgcactgcactctctgggctccgcccggcatctcgtcgtcctcctcgtac 470
||||| || ||||||||||| ||||| | ||||||||||| || |||||||| || ||
Sbjct: 145 tactgctgggcgcactgcaccctctgcccgccgcccggcatatcctcgtcctcgtcatag 204
Query: 471 gcctcctg 478
||||||||
Sbjct: 205 gcctcctg 212
>gb|CA000804.1|CA000804 HS06L19u HS Hordeum vulgare subsp. vulgare cDNA clone HS06L19
3-PRIME, mRNA sequence
Length = 528
Score = 89.7 bits (45), Expect = 3e-016
Identities = 108/129 (83%)
Strand = Plus / Plus
Query: 603 gtctcgagagccttgcactgctctggtgccagcgagtcggggaactccaccgtgaaatga 662
|||||||| ||||||||||| || | ||||||||||||||| | |||||||| ||
Sbjct: 362 gtctcgagggccttgcactggtccaggctcagcgagtcggggaaaacaaccgtgaagtgg 421
Query: 663 atgtacagcttccccttcatgaaaggcctctggtaaatcggcatcccctcatcgtttatt 722
||||| ||||| ||||||||||| ||||||||||| || ||||| ||||| ||||| ||
Sbjct: 422 atgtagagcttgcccttcatgaagggcctctggtacatgggcatgccctcgtcgttgatc 481
Query: 723 gccttgaat 731
|||||||||
Sbjct: 482 gccttgaat 490
Score = 36.2 bits (18), Expect = 3.7
Identities = 33/38 (86%)
Strand = Plus / Plus
Query: 441 ccgcccggcatctcgtcgtcctcctcgtacgcctcctg 478
||||||||||| || |||||||| || || ||||||||
Sbjct: 203 ccgcccggcatatcctcgtcctcgtcataggcctcctg 240
>gb|CA027563.1|CA027563 HZ59F03r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ59F03
5-PRIME, mRNA sequence
Length = 476
Score = 89.7 bits (45), Expect = 3e-016
Identities = 108/129 (83%)
Strand = Plus / Minus
Query: 603 gtctcgagagccttgcactgctctggtgccagcgagtcggggaactccaccgtgaaatga 662
|||||||| ||||||||||| || | ||||||||||||||| | |||||||| ||
Sbjct: 160 gtctcgagggccttgcactggtccaggctcagcgagtcggggaaaacaaccgtgaagtgg 101
Query: 663 atgtacagcttccccttcatgaaaggcctctggtaaatcggcatcccctcatcgtttatt 722
||||| ||||| ||||||||||| ||||||||||| || ||||| ||||| ||||| ||
Sbjct: 100 atgtagagcttgcccttcatgaagggcctctggtacatgggcatgccctcgtcgttgatc 41
Query: 723 gccttgaat 731
|||||||||
Sbjct: 40 gccttgaat 32
Score = 36.2 bits (18), Expect = 3.7
Identities = 33/38 (86%)
Strand = Plus / Minus
Query: 441 ccgcccggcatctcgtcgtcctcctcgtacgcctcctg 478
||||||||||| || |||||||| || || ||||||||
Sbjct: 319 ccgcccggcatatcctcgtcctcgtcataggcctcctg 282
>gb|CA027458.1|CA027458 HZ58P20r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ58P20
5-PRIME, mRNA sequence
Length = 329
Score = 87.7 bits (44), Expect = 1e-015
Identities = 143/176 (81%)
Strand = Plus / Minus
Query: 603 gtctcgagagccttgcactgctctggtgccagcgagtcggggaactccaccgtgaaatga 662
|||||||| ||||||||||| || | ||||||||||||||| | |||||||| ||
Sbjct: 187 gtctcgagggccttgcactggtccaggctcagcgagtcggggaaaacaaccgtgaagtgg 128
Query: 663 atgtacagcttccccttcatgaaaggcctctggtaaatcggcatcccctcatcgtttatt 722
||||| ||||| ||||||||||| ||||||||||| || ||||| ||||| ||||| ||
Sbjct: 127 atgtagagcttgcccttcatgaagggcctctggtacatgggcatgccctcgtcgttgatc 68
Query: 723 gccttgaattggtcaggtttaacaacttcaccagggtctgatttgatgagaagctg 778
||||| ||| ||||| || |||||||| || |||| || |||||||| |||||
Sbjct: 67 gccttcaatgaatcaggcttgacaacttccccggggttggacttgatgagcagctg 12
>gb|BM100471.2|BM100471 EBma01_SQ005_F02_R maternal, 4 DPA, no treatment, cv Optic, EBma01
Hordeum vulgare subsp. vulgare cDNA clone
EBma01_SQ005_F02 5', mRNA sequence
Length = 361
Score = 85.7 bits (43), Expect = 4e-015
Identities = 74/83 (89%), Gaps = 6/83 (7%)
Strand = Plus / Minus
Query: 408 gcttactgttgcgcgcactgcactctctgggctccg---cccggcatctcgtcgt---cc 461
|||||||||||||||||||||||||||||||| ||| |||||||||||||||| ||
Sbjct: 85 gcttactgttgcgcgcactgcactctctgggcaccgcctcccggcatctcgtcgtcgccc 26
Query: 462 tcctcgtacgcctcctgggcagc 484
|| |||||||||||||| |||||
Sbjct: 25 tcgtcgtacgcctcctgagcagc 3
>gb|CV055183.1|CV055183 BNEL117g3 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL117g3 5' similar to Zea mays
CL1808_1 mRNA sequence
Length = 342
Score = 85.7 bits (43), Expect = 4e-015
Identities = 74/83 (89%), Gaps = 6/83 (7%)
Strand = Plus / Minus
Query: 408 gcttactgttgcgcgcactgcactctctgggctccg---cccggcatc---tcgtcgtcc 461
|||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||
Sbjct: 98 gcttactgttgcgcgcactgcactctctgggcaccgcctcccggcatctcgtcgtcgtcc 39
Query: 462 tcctcgtacgcctcctgggcagc 484
|| |||||||||||||| |||||
Sbjct: 38 tcgtcgtacgcctcctgagcagc 16
>gb|CV063398.1|CV063398 BNEL89h12 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL89h12 5' similar to Zea mays
CL1808_1 mRNA sequence
Length = 342
Score = 85.7 bits (43), Expect = 4e-015
Identities = 74/83 (89%), Gaps = 6/83 (7%)
Strand = Plus / Minus
Query: 408 gcttactgttgcgcgcactgcactctctgggctccg---cccggcatc---tcgtcgtcc 461
|||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||
Sbjct: 98 gcttactgttgcgcgcactgcactctctgggcaccgcctcccggcatctcgtcgtcgtcc 39
Query: 462 tcctcgtacgcctcctgggcagc 484
|| |||||||||||||| |||||
Sbjct: 38 tcgtcgtacgcctcctgagcagc 16
>gb|BF257618.2|BF257618 HVSMEf0013F22f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0013F22f, mRNA sequence
Length = 873
Score = 83.8 bits (42), Expect = 2e-014
Identities = 93/110 (84%)
Strand = Plus / Minus
Query: 912 atgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatcttctgg 971
|||||||| || || |||||||| ||||||||||||||||| |||| ||||| |||
Sbjct: 412 atgtctcctgtcactgtatcaggagcttcatcagcttcaccctggaatacaatcttttgg 353
Query: 972 ctgtgttgcattcccttctcaacatgaacctcaagaaccttcttctcctg 1021
| ||||||||||||||||| ||||||||||| | ||||||||||||||
Sbjct: 352 ccatgttgcattcccttctccacatgaacctccaagaccttcttctcctg 303
>gb|BF260166.2|BF260166 HVSMEf0021E13f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0021E13f, mRNA sequence
Length = 546
Score = 83.8 bits (42), Expect = 2e-014
Identities = 93/110 (84%)
Strand = Plus / Minus
Query: 912 atgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatcttctgg 971
|||||||| || || |||||||| ||||||||||||||||| |||| ||||| |||
Sbjct: 412 atgtctcctgtcactgtatcaggagcttcatcagcttcaccctggaatacaatcttttgg 353
Query: 972 ctgtgttgcattcccttctcaacatgaacctcaagaaccttcttctcctg 1021
| ||||||||||||||||| ||||||||||| | ||||||||||||||
Sbjct: 352 ccatgttgcattcccttctccacatgaacctccaagaccttcttctcctg 303
>gb|BE216076.2|BE216076 HV_CEb0009F11f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0009F11f, mRNA sequence
Length = 556
Score = 83.8 bits (42), Expect = 2e-014
Identities = 93/110 (84%)
Strand = Plus / Minus
Query: 912 atgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatcttctgg 971
|||||||| || || |||||||| ||||||||||||||||| |||| |||||| |||
Sbjct: 345 atgtctcctgttactgtatcaggagcttcatcagcttcaccctggaatacgatcttttgg 286
Query: 972 ctgtgttgcattcccttctcaacatgaacctcaagaaccttcttctcctg 1021
| ||||||||||||||||| ||||||||||| | ||||| ||||||||
Sbjct: 285 ccatgttgcattcccttctccacatgaacctccaagacctttttctcctg 236
>gb|AV913940.1|AV913940 AV913940 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags23n08 5', mRNA sequence
Length = 590
Score = 83.8 bits (42), Expect = 2e-014
Identities = 93/110 (84%)
Strand = Plus / Minus
Query: 912 atgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatcttctgg 971
|||||||| || || |||||||| ||||||||||||||||| |||| |||||| |||
Sbjct: 269 atgtctcctgttactgtatcaggagcttcatcagcttcaccctggaatacgatcttttgg 210
Query: 972 ctgtgttgcattcccttctcaacatgaacctcaagaaccttcttctcctg 1021
| ||||||||||||||||| ||||||||||| | ||||| ||||||||
Sbjct: 209 ccatgttgcattcccttctccacatgaacctccaagacctttttctcctg 160
>gb|BQ464485.1|BQ464485 HF02G16r HF Hordeum vulgare subsp. vulgare cDNA clone HF02G16
5-PRIME, mRNA sequence
Length = 589
Score = 83.8 bits (42), Expect = 2e-014
Identities = 93/110 (84%)
Strand = Plus / Minus
Query: 912 atgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatcttctgg 971
|||||||| || || |||||||| ||||||||||||||||| |||| |||||| |||
Sbjct: 500 atgtctcctgttactgtatcaggagcttcatcagcttcaccctggaatacgatcttttgg 441
Query: 972 ctgtgttgcattcccttctcaacatgaacctcaagaaccttcttctcctg 1021
| ||||||||||||||||| ||||||||||| | ||||| ||||||||
Sbjct: 440 ccatgttgcattcccttctccacatgaacctccaagacctttttctcctg 391
>gb|BQ465243.1|BQ465243 HU03A18r HU Hordeum vulgare subsp. vulgare cDNA clone HU03A18
5-PRIME, mRNA sequence
Length = 654
Score = 83.8 bits (42), Expect = 2e-014
Identities = 93/110 (84%)
Strand = Plus / Minus
Query: 912 atgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatcttctgg 971
|||||||| || || |||||||| ||||||||||||||||| |||| ||||| |||
Sbjct: 447 atgtctcctgtcactgtatcaggagcttcatcagcttcaccctggaatacaatcttttgg 388
Query: 972 ctgtgttgcattcccttctcaacatgaacctcaagaaccttcttctcctg 1021
| ||||||||||||||||| ||||||||||| | ||||||||||||||
Sbjct: 387 ccatgttgcattcccttctccacatgaacctccaagaccttcttctcctg 338
>gb|BQ758588.1|BQ758588 EBma07_SQ002_O03_R maternal, 21 DPA, no treatment, cv Optic, EBma07
Hordeum vulgare subsp. vulgare cDNA clone
EBma07_SQ002_O03 5', mRNA sequence
Length = 360
Score = 83.8 bits (42), Expect = 2e-014
Identities = 66/74 (89%)
Strand = Plus / Minus
Query: 1412 tccaccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacg 1471
||||||||| |||||||| ||||| |||||||| ||||||||||||||||| ||||| ||
Sbjct: 74 tccaccacctcccattccctccttgagggcatcctcaccatactgatcatagatctctcg 15
Query: 1472 tttctctggatcac 1485
||||| |||||||
Sbjct: 14 cttctcaggatcac 1
Score = 38.2 bits (19), Expect = 0.94
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 1335 cccctgctgcttccaccacctcc 1357
||||||||||| |||||||||||
Sbjct: 154 cccctgctgctgccaccacctcc 132
>gb|BU990375.1|BU990375 HF24N12r HF Hordeum vulgare subsp. vulgare cDNA clone HF24N12
5-PRIME, mRNA sequence
Length = 682
Score = 83.8 bits (42), Expect = 2e-014
Identities = 93/110 (84%)
Strand = Plus / Minus
Query: 912 atgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatcttctgg 971
|||||||| || || |||||||| ||||||||||||||||| |||| ||||| |||
Sbjct: 600 atgtctcctgtcactgtatcaggagcttcatcagcttcaccctggaatacaatcttttgg 541
Query: 972 ctgtgttgcattcccttctcaacatgaacctcaagaaccttcttctcctg 1021
| ||||||||||||||||| ||||||||||| | ||||||||||||||
Sbjct: 540 ccatgttgcattcccttctccacatgaacctccaagaccttcttctcctg 491
>gb|CA011986.1|CA011986 HT04B17r HT Hordeum vulgare subsp. vulgare cDNA clone HT04B17
5-PRIME, mRNA sequence
Length = 650
Score = 83.8 bits (42), Expect = 2e-014
Identities = 93/110 (84%)
Strand = Plus / Minus
Query: 912 atgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatcttctgg 971
|||||||| || || |||||||| ||||||||||||||||| |||| ||||| |||
Sbjct: 199 atgtctcctgtcactgtatcaggagcttcatcagcttcaccctggaatacaatcttttgg 140
Query: 972 ctgtgttgcattcccttctcaacatgaacctcaagaaccttcttctcctg 1021
| ||||||||||||||||| ||||||||||| | ||||||||||||||
Sbjct: 139 ccatgttgcattcccttctccacatgaacctccaagaccttcttctcctg 90
>gb|CA027033.1|CA027033 HZ57L06r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ57L06
5-PRIME, mRNA sequence
Length = 482
Score = 83.8 bits (42), Expect = 2e-014
Identities = 93/110 (84%)
Strand = Plus / Minus
Query: 912 atgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatcttctgg 971
|||||||| || || |||||||| ||||||||||||||||| |||| ||||| |||
Sbjct: 157 atgtctcctgtcactgtatcaggagcttcatcagcttcaccctggaatacaatcttttgg 98
Query: 972 ctgtgttgcattcccttctcaacatgaacctcaagaaccttcttctcctg 1021
| ||||||||||||||||| ||||||||||| | ||||||||||||||
Sbjct: 97 ccatgttgcattcccttctccacatgaacctccaagaccttcttctcctg 48
>gb|BJ544004.1|BJ544004 BJ544004 K. Sato unpublished cDNA library, cv. Akashinriki vegetative
stage leaves Hordeum vulgare subsp. vulgare cDNA clone
baak17j20 5', mRNA sequence
Length = 543
Score = 83.8 bits (42), Expect = 2e-014
Identities = 93/110 (84%)
Strand = Plus / Minus
Query: 912 atgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatcttctgg 971
|||||||| || || |||||||| ||||||||||||||||| |||| ||||| |||
Sbjct: 255 atgtctcctgtcactgtatcaggagcttcatcagcttcaccctggaatacaatcttttgg 196
Query: 972 ctgtgttgcattcccttctcaacatgaacctcaagaaccttcttctcctg 1021
| ||||||||||||||||| ||||||||||| | ||||||||||||||
Sbjct: 195 ccatgttgcattcccttctccacatgaacctccaagaccttcttctcctg 146
>gb|BF266282.2|BF266282 HV_CEa0014L02f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0014L02f, mRNA sequence
Length = 576
Score = 81.8 bits (41), Expect = 7e-014
Identities = 68/77 (88%)
Strand = Plus / Minus
Query: 1412 tccaccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacg 1471
|||||| || |||||||| ||||| |||||||| ||||||||||||||||| ||||| ||
Sbjct: 82 tccaccgcctcccattccctccttgagggcatcctcaccatactgatcatagatctctcg 23
Query: 1472 tttctctggatcactca 1488
||||| ||||||||||
Sbjct: 22 cttctcaggatcactca 6
>gb|BE216060.2|BE216060 HV_CEb0009E14f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0009E14f, mRNA sequence
Length = 572
Score = 81.8 bits (41), Expect = 7e-014
Identities = 68/77 (88%)
Strand = Plus / Minus
Query: 927 gtatcaggcgcttcatcagcttcaccagggaaggtgatcttctggctgtgttgcattccc 986
|||||||| ||||||||||||||||| |||| | |||| | ||||| ||||||||||||
Sbjct: 330 gtatcaggagcttcatcagcttcaccctggaatgcgatcatttggctatgttgcattccc 271
Query: 987 ttctcaacatgaacctc 1003
||||| |||||||||||
Sbjct: 270 ttctccacatgaacctc 254
>gb|AV925145.1|AV925145 AV925145 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp. vulgare
cDNA clone basd21o06 5', mRNA sequence
Length = 149
Score = 81.8 bits (41), Expect = 7e-014
Identities = 56/61 (91%)
Strand = Plus / Minus
Query: 1612 ccccgaggatctcatagtacttggtgttgtcgctcttcttcggcgcgcgcccgaacatct 1671
||||||||| ||| |||||||||||||||||||||||||| || ||||| ||||||||||
Sbjct: 149 ccccgaggacctcgtagtacttggtgttgtcgctcttcttgggggcgcggccgaacatct 90
Query: 1672 t 1672
|
Sbjct: 89 t 89
>gb|AL509560.1|AL509560 AL509560 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY02D05u 3',
mRNA sequence
Length = 512
Score = 75.8 bits (38), Expect = 4e-012
Identities = 108/130 (83%), Gaps = 1/130 (0%)
Strand = Plus / Plus
Query: 603 gtctcgagagccttgcactgctctggtgccagcgagtcggggaactccaccgtgaaatga 662
|||||||| ||||||||||| || | ||||||||||||||| | |||||||| ||
Sbjct: 380 gtctcgagggccttgcactggtccaggctcagcgagtcggggaaaacaaccgtgaagtgg 439
Query: 663 -atgtacagcttccccttcatgaaaggcctctggtaaatcggcatcccctcatcgtttat 721
||||| ||||| ||||||||||| ||||||||||| || ||||| ||||| ||||| ||
Sbjct: 440 gatgtagagcttgcccttcatgaagggcctctggtacatgggcatgccctcgtcgttgat 499
Query: 722 tgccttgaat 731
|||||||||
Sbjct: 500 cgccttgaat 509
Score = 36.2 bits (18), Expect = 3.7
Identities = 33/38 (86%)
Strand = Plus / Plus
Query: 441 ccgcccggcatctcgtcgtcctcctcgtacgcctcctg 478
||||||||||| || |||||||| || || ||||||||
Sbjct: 221 ccgcccggcatatcctcgtcctcgtcataggcctcctg 258
>gb|CB878788.1|CB878788 HP09M21T HP Hordeum vulgare subsp. vulgare cDNA clone HP09M21
5-PRIME, mRNA sequence
Length = 467
Score = 75.8 bits (38), Expect = 4e-012
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 1412 tccaccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacg 1471
||||||||| |||||||| ||||| |||||||| ||||||||||||||||| ||||| ||
Sbjct: 68 tccaccacctcccattccctccttgagggcatcctcaccatactgatcatagatctctcg 9
Query: 1472 tttctc 1477
|||||
Sbjct: 8 cttctc 3
Score = 52.0 bits (26), Expect = 6e-005
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 1066 tgatgctctccccagtccccttgcactcgttgcaaggctgctgcatctgctgtatcat 1123
||||| |||| ||| | ||| ||||||| ||||| ||||||||||| |||||||||||
Sbjct: 417 tgatggtctcaccacttcccctgcactcattgcagggctgctgcatttgctgtatcat 360
Score = 38.2 bits (19), Expect = 0.94
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 1335 cccctgctgcttccaccacctcc 1357
||||||||||| |||||||||||
Sbjct: 148 cccctgctgctgccaccacctcc 126
>gb|BJ544857.1|BJ544857 BJ544857 K. Sato unpublished cDNA library, cv. Akashinriki vegetative
stage leaves Hordeum vulgare subsp. vulgare cDNA clone
baak39b08 5', mRNA sequence
Length = 635
Score = 71.9 bits (36), Expect = 7e-011
Identities = 78/92 (84%)
Strand = Plus / Minus
Query: 912 atgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatcttctgg 971
|||||||| || || |||||||| ||||||||||||||||| |||| ||||| |||
Sbjct: 104 atgtctcctgtcactgtatcaggagcttcatcagcttcaccctggaatacaatcttttgg 45
Query: 972 ctgtgttgcattcccttctcaacatgaacctc 1003
| ||||||||||||||||| |||||||||||
Sbjct: 44 ccatgttgcattcccttctccacatgaacctc 13
>gb|AL510951.1|AL510951 AL510951 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY06I06u 3',
mRNA sequence
Length = 603
Score = 69.9 bits (35), Expect = 3e-010
Identities = 80/95 (84%)
Strand = Plus / Plus
Query: 603 gtctcgagagccttgcactgctctggtgccagcgagtcggggaactccaccgtgaaatga 662
|||||||| ||||||||||| || | ||||||||||||||| | |||||||| ||
Sbjct: 433 gtctcgagggccttgcactggtccaggctcagcgagtcggggaaaacaaccgtgaagtgg 492
Query: 663 atgtacagcttccccttcatgaaaggcctctggta 697
||||| ||||| ||||||||||| |||||||||||
Sbjct: 493 atgtagagcttgcccttcatgaagggcctctggta 527
Score = 36.2 bits (18), Expect = 3.7
Identities = 33/38 (86%)
Strand = Plus / Plus
Query: 441 ccgcccggcatctcgtcgtcctcctcgtacgcctcctg 478
||||||||||| || |||||||| || || ||||||||
Sbjct: 274 ccgcccggcatatcctcgtcctcgtcataggcctcctg 311
>gb|CA008057.1|CA008057 HU09M12r HU Hordeum vulgare subsp. vulgare cDNA clone HU09M12
5-PRIME, mRNA sequence
Length = 639
Score = 67.9 bits (34), Expect = 1e-009
Identities = 91/110 (82%)
Strand = Plus / Minus
Query: 912 atgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatcttctgg 971
|||||||| || || |||||||| ||||||||||||||||| |||| ||||| |||
Sbjct: 432 atgtctcctgtcactgtatcaggagcttcatcagcttcaccctggaatacaatcttttgg 373
Query: 972 ctgtgttgcattcccttctcaacatgaacctcaagaaccttcttctcctg 1021
| |||||||| ||||||| ||||||||||| | ||||||||||||||
Sbjct: 372 ccatgttgcatagccttctccacatgaacctccaagaccttcttctcctg 323
>gb|BQ471536.1|BQ471536 HV02L16r HV Hordeum vulgare subsp. vulgare cDNA clone HV02L16
5-PRIME, mRNA sequence
Length = 616
Score = 60.0 bits (30), Expect = 3e-007
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 1626 tagtacttggtgttgtcgctcttcttcggcgcgcgcccgaac 1667
|||||||||||||||||||||||||| || ||||| ||||||
Sbjct: 614 tagtacttggtgttgtcgctcttcttgggggcgcggccgaac 573
>gb|AV916937.1|AV916937 AV916937 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20c14 5', mRNA sequence
Length = 474
Score = 58.0 bits (29), Expect = 1e-006
Identities = 92/113 (81%)
Strand = Plus / Minus
Query: 1011 ttcttctcctgaacgaccttctcacccttacaccctgggcagcggtccttctcgttgatg 1070
|||||||| ||||| |||||||||||||| ||| ||| || ||||| || |||||
Sbjct: 424 ttcttctcgtgaaccaccttctcacccttgcactgcccgcaacgatccttatcactgatg 365
Query: 1071 ctctccccagtccccttgcactcgttgcaaggctgctgcatctgctgtatcat 1123
|||| ||| | ||| ||||||| ||||| ||||||||||| |||||||||||
Sbjct: 364 gtctcaccacttcccctgcactcattgcagggctgctgcatttgctgtatcat 312
Score = 38.2 bits (19), Expect = 0.94
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 1335 cccctgctgcttccaccacctcc 1357
||||||||||| |||||||||||
Sbjct: 100 cccctgctgctgccaccacctcc 78
>gb|BG309549.1|BG309549 HVSMEc0011A02f Hordeum vulgare seedling shoot EST library HVcDNA0003
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEc0011A02f, mRNA sequence
Length = 872
Score = 54.0 bits (27), Expect = 2e-005
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 1565 cttgcggtaggccttcttgaggtcgtc 1591
|||||||||||||||||||||||||||
Sbjct: 74 cttgcggtaggccttcttgaggtcgtc 48
>gb|BF259025.2|BF259025 HVSMEf0017H02f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0017H02f, mRNA sequence
Length = 580
Score = 54.0 bits (27), Expect = 2e-005
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 1565 cttgcggtaggccttcttgaggtcgtc 1591
|||||||||||||||||||||||||||
Sbjct: 277 cttgcggtaggccttcttgaggtcgtc 251
>gb|BI950800.1|BI950800 HVSMEl0023D18f Hordeum vulgare spike EST library HVcDNA0012 (Fusarium
infected) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEl0023D18f, mRNA sequence
Length = 535
Score = 54.0 bits (27), Expect = 2e-005
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 975 tgttgcattcccttctcaacatgaacctcaagaaccttcttctcctg 1021
||||||||| ||||||| ||||||||||| | ||||||||||||||
Sbjct: 409 tgttgcatttccttctccacatgaacctccaagaccttcttctcctg 363
>gb|BF257366.3|BF257366 HVSMEf0012L04f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0012L04f, mRNA sequence
Length = 538
Score = 54.0 bits (27), Expect = 2e-005
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 1565 cttgcggtaggccttcttgaggtcgtc 1591
|||||||||||||||||||||||||||
Sbjct: 244 cttgcggtaggccttcttgaggtcgtc 218
>gb|BG344813.2|BG344813 HVSMEg0016C23f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0016C23f, mRNA sequence
Length = 578
Score = 54.0 bits (27), Expect = 2e-005
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 1565 cttgcggtaggccttcttgaggtcgtc 1591
|||||||||||||||||||||||||||
Sbjct: 175 cttgcggtaggccttcttgaggtcgtc 149
>gb|BQ467353.1|BQ467353 HS03H23r HS Hordeum vulgare subsp. vulgare cDNA clone HS03H23
5-PRIME, mRNA sequence
Length = 535
Score = 54.0 bits (27), Expect = 2e-005
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 1565 cttgcggtaggccttcttgaggtcgtc 1591
|||||||||||||||||||||||||||
Sbjct: 114 cttgcggtaggccttcttgaggtcgtc 88
>gb|BQ467403.1|BQ467403 HS03K10r HS Hordeum vulgare subsp. vulgare cDNA clone HS03K10
5-PRIME, mRNA sequence
Length = 394
Score = 54.0 bits (27), Expect = 2e-005
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 1565 cttgcggtaggccttcttgaggtcgtc 1591
|||||||||||||||||||||||||||
Sbjct: 281 cttgcggtaggccttcttgaggtcgtc 255
>gb|CA012322.1|CA012322 HT05B17r HT Hordeum vulgare subsp. vulgare cDNA clone HT05B17
5-PRIME, mRNA sequence
Length = 393
Score = 54.0 bits (27), Expect = 2e-005
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 1565 cttgcggtaggccttcttgaggtcgtc 1591
|||||||||||||||||||||||||||
Sbjct: 275 cttgcggtaggccttcttgaggtcgtc 249
>gb|CA014740.1|CA014740 HT12D14r HT Hordeum vulgare subsp. vulgare cDNA clone HT12D14
5-PRIME, mRNA sequence
Length = 650
Score = 54.0 bits (27), Expect = 2e-005
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 1565 cttgcggtaggccttcttgaggtcgtc 1591
|||||||||||||||||||||||||||
Sbjct: 319 cttgcggtaggccttcttgaggtcgtc 293
>gb|CA032582.1|CA032582 HX13I12r HX Hordeum vulgare subsp. vulgare cDNA clone HX13I12
5-PRIME, mRNA sequence
Length = 629
Score = 54.0 bits (27), Expect = 2e-005
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 1565 cttgcggtaggccttcttgaggtcgtc 1591
|||||||||||||||||||||||||||
Sbjct: 295 cttgcggtaggccttcttgaggtcgtc 269
>gb|BF261461.2|BF261461 HV_CEa0001F14f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0001F14f, mRNA sequence
Length = 1062
Score = 52.0 bits (26), Expect = 6e-005
Identities = 59/70 (84%)
Strand = Plus / Minus
Query: 1053 cggtccttctcgttgatgctctccccagtccccttgcactcgttgcaaggctgctgcatc 1112
|||||||| || ||||| |||| ||| | ||| ||||||| ||||| |||||||||||
Sbjct: 221 cggtccttatcactgatggtctcaccacttcccctgcactcattgcagggctgctgcatt 162
Query: 1113 tgctgtatca 1122
||||||||||
Sbjct: 161 tgctgtatca 152
>gb|BM817108.1|BM817108 HC02A07_T3.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC02A07_T3.ab1 similar to DNAJ PROTEIN,, mRNA sequence
Length = 808
Score = 52.0 bits (26), Expect = 6e-005
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 1066 tgatgctctccccagtccccttgcactcgttgcaaggctgctgcatctgctgtatcat 1123
||||| |||| ||| | ||| ||||||| ||||| ||||||||||| |||||||||||
Sbjct: 355 tgatggtctcaccacttcccctgcactcattgcagggctgctgcatttgctgtatcat 298
Score = 38.2 bits (19), Expect = 0.94
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 1335 cccctgctgcttccaccacctcc 1357
||||||||||| |||||||||||
Sbjct: 86 cccctgctgctgccaccacctcc 64
>gb|AW983459.2|AW983459 HVSMEg0010L09f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0010L09f, mRNA sequence
Length = 865
Score = 50.1 bits (25), Expect = 2e-004
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 912 atgtctccagtaacggtatcaggcgcttcatcagcttcacc 952
|||||||| || || |||||||| |||||||||||||||||
Sbjct: 57 atgtctcctgtcactgtatcaggagcttcatcagcttcacc 17
>gb|CK125297.1|CK125297 BES1824107j24 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010J247 5-PRIME, mRNA sequence
Length = 853
Score = 48.1 bits (24), Expect = 0.001
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 1520 cttctcggggtcaccgcccttgtc 1543
||||||||||||||||||||||||
Sbjct: 24 cttctcggggtcaccgcccttgtc 1
>gb|BI949923.1|BI949923 HVSMEl0016P24f Hordeum vulgare spike EST library HVcDNA0012 (Fusarium
infected) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEl0016P24f, mRNA sequence
Length = 542
Score = 44.1 bits (22), Expect = 0.015
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 1087 tgcactcgttgcaaggctgctgcatctgctgtatcat 1123
||||||| ||||| || |||||||| |||||||||||
Sbjct: 253 tgcactcattgcagggntgctgcatttgctgtatcat 217
>gb|BE215945.2|BE215945 HV_CEb0008O15f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0008O15f, mRNA sequence
Length = 493
Score = 42.1 bits (21), Expect = 0.060
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1681 ctccggcggtgccgccgccgc 1701
|||||||||||||||||||||
Sbjct: 74 ctccggcggtgccgccgccgc 94
>gb|BM097533.2|BM097533 EBem04_SQ001_O07_R embryo, 12 DPA, no treatment, cv Optic, EBem04
Hordeum vulgare subsp. vulgare cDNA clone
EBem04_SQ001_O07 5', mRNA sequence
Length = 250
Score = 42.1 bits (21), Expect = 0.060
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 446 cggcatctcgtcgtcctcctc 466
|||||||||||||||||||||
Sbjct: 198 cggcatctcgtcgtcctcctc 178
>gb|BQ753920.1|BQ753920 EBca01_SQ002_E10_R carpel, pre-anthesis, no treatment, cv Optic,
EBca01 Hordeum vulgare subsp. vulgare cDNA clone
EBca01_SQ002_E10 5', mRNA sequence
Length = 361
Score = 42.1 bits (21), Expect = 0.060
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1681 ctccggcggtgccgccgccgc 1701
|||||||||||||||||||||
Sbjct: 227 ctccggcggtgccgccgccgc 247
>gb|CA021268.1|CA021268 HZ39J16r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ39J16
5-PRIME, mRNA sequence
Length = 452
Score = 42.1 bits (21), Expect = 0.060
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 446 cggcatctcgtcgtcctcctc 466
|||||||||||||||||||||
Sbjct: 221 cggcatctcgtcgtcctcctc 201
>emb|AJ272313.1|HVU272313 Hordeum vulgare mRNA for gamma tubulin (gtub gene)
Length = 2039
Score = 42.1 bits (21), Expect = 0.060
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 446 cggcatctcgtcgtcctcctc 466
|||||||||||||||||||||
Sbjct: 161 cggcatctcgtcgtcctcctc 141
>gb|AV832799.1|AV832799 AV832799 K. Sato unpublished cDNA library: Hordeum vulgare subsp.
vulgare top three leaves adult, heading stage Hordeum
vulgare subsp. vulgare cDNA clone baal6j03, mRNA sequence
Length = 637
Score = 40.1 bits (20), Expect = 0.24
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 1565 cttgcggtaggccttcttgaggtcgtc 1591
|||||||||||| | ||||||||||||
Sbjct: 50 cttgcggtaggcttncttgaggtcgtc 24
>gb|BG343924.1|BG343924 HVSMEg0007C04f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0007C04f, mRNA sequence
Length = 830
Score = 40.1 bits (20), Expect = 0.24
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1568 gcggtaggccttcttgaggtcgtc 1591
|||||||||||||||||| |||||
Sbjct: 182 gcggtaggccttcttgagctcgtc 159
>gb|BM097845.2|BM097845 EBem04_SQ002_N22_R embryo, 12 DPA, no treatment, cv Optic, EBem04
Hordeum vulgare subsp. vulgare cDNA clone
EBem04_SQ002_N22 5', mRNA sequence
Length = 280
Score = 40.1 bits (20), Expect = 0.24
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1568 gcggtaggccttcttgaggtcgtc 1591
|||||||||||||||||| |||||
Sbjct: 142 gcggtaggccttcttgagctcgtc 119
>gb|BI780669.2|BI780669 EBes01_SQ001_L09_R embryo sac, 4-6 DPA, no treatment, cv Optic,
EBes01 Hordeum vulgare subsp. vulgare cDNA clone
EBes01_SQ001_L09 5', mRNA sequence
Length = 499
Score = 40.1 bits (20), Expect = 0.24
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1568 gcggtaggccttcttgaggtcgtc 1591
|||||||||||||||||| |||||
Sbjct: 176 gcggtaggccttcttgagctcgtc 153
>gb|CA002818.1|CA002818 HS08J22r HS Hordeum vulgare subsp. vulgare cDNA clone HS08J22
5-PRIME, mRNA sequence
Length = 337
Score = 40.1 bits (20), Expect = 0.24
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1568 gcggtaggccttcttgaggtcgtc 1591
|||||||||||||||||| |||||
Sbjct: 145 gcggtaggccttcttgagctcgtc 122
>gb|AL501450.1|AL501450 AL501450 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW04D24u 3', mRNA sequence
Length = 541
Score = 38.2 bits (19), Expect = 0.94
Identities = 28/31 (90%)
Strand = Plus / Plus
Query: 538 tcgtctcctcgcattcatctatctccatgtc 568
||||||||||||| || |||| |||||||||
Sbjct: 360 tcgtctcctcgcactcgtctagctccatgtc 390
Score = 36.2 bits (18), Expect = 3.7
Identities = 33/38 (86%)
Strand = Plus / Plus
Query: 441 ccgcccggcatctcgtcgtcctcctcgtacgcctcctg 478
||||||||||| || |||||||| || || ||||||||
Sbjct: 266 ccgcccggcatatcctcgtcctcgtcataggcctcctg 303
>gb|BG414677.1|BG414677 HVSMEk0003F07f Hordeum vulgare testa/pericarp EST library HVcDNA0013
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEk0003F07f, mRNA sequence
Length = 624
Score = 38.2 bits (19), Expect = 0.94
Identities = 58/71 (81%)
Strand = Plus / Minus
Query: 930 tcaggcgcttcatcagcttcaccagggaaggtgatcttctggctgtgttgcattcccttc 989
||||| ||||||||||| ||||| |||| ||||| |||| ||||||||||| |||
Sbjct: 431 tcaggagcttcatcagcgtcaccttggaattcaatcttttggccatgttgcattccgttc 372
Query: 990 tcaacatgaac 1000
|| ||||||||
Sbjct: 371 tccacatgaac 361
>gb|BU971318.1|BU971318 HB17E08r BC Hordeum vulgare subsp. vulgare cDNA clone HB17E08
5-PRIME, mRNA sequence
Length = 325
Score = 38.2 bits (19), Expect = 0.94
Identities = 28/31 (90%)
Strand = Plus / Minus
Query: 538 tcgtctcctcgcattcatctatctccatgtc 568
||||||||||||| || |||| |||||||||
Sbjct: 52 tcgtctcctcgcactcgtctagctccatgtc 22
Score = 36.2 bits (18), Expect = 3.7
Identities = 33/38 (86%)
Strand = Plus / Minus
Query: 441 ccgcccggcatctcgtcgtcctcctcgtacgcctcctg 478
||||||||||| || |||||||| || || ||||||||
Sbjct: 146 ccgcccggcatatcctcgtcctcgtcataggcctcctg 109
>gb|BF260109.1|BF260109 HVSMEf0021C04f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0021C04f, mRNA sequence
Length = 847
Score = 36.2 bits (18), Expect = 3.7
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 1645 tcttcttcggcgcgcgcc 1662
||||||||||||||||||
Sbjct: 267 tcttcttcggcgcgcgcc 284
>gb|BF631070.2|BF631070 HVSMEb0014O07f Hordeum vulgare seedling shoot EST library HVcDNA0002
(Dehydration stress) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEb0014O07f, mRNA sequence
Length = 775
Score = 36.2 bits (18), Expect = 3.7
Identities = 24/26 (92%)
Strand = Plus / Minus
Query: 1312 cttctcccctcctttgccttcttccc 1337
||||||||||||| ||||| ||||||
Sbjct: 534 cttctcccctcctctgcctccttccc 509
>gb|BM444402.1|BM444402 EBem09_SQ005_B17_R embryo, 1 Day germination, no treatment, cv Optic,
EBem09 Hordeum vulgare subsp. vulgare cDNA clone
EBem09_SQ005_B17 5', mRNA sequence
Length = 128
Score = 36.2 bits (18), Expect = 3.7
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 1691 gccgccgccgctcgccga 1708
||||||||||||||||||
Sbjct: 26 gccgccgccgctcgccga 43
>gb|BJ469566.1|BJ469566 BJ469566 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal23o19 5', mRNA sequence
Length = 513
Score = 36.2 bits (18), Expect = 3.7
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 1684 cggcggtgccgccgccgc 1701
||||||||||||||||||
Sbjct: 122 cggcggtgccgccgccgc 105
>gb|BM440844.2|BM440844 EBca01_SQ001_G01_R carpel, pre-anthesis, no treatment, cv Optic,
EBca01 Hordeum vulgare subsp. vulgare cDNA clone
EBca01_SQ001_G01 5', mRNA sequence
Length = 348
Score = 36.2 bits (18), Expect = 3.7
Identities = 24/26 (92%)
Strand = Plus / Plus
Query: 1681 ctccggcggtgccgccgccgctcgcc 1706
||||| ||| ||||||||||||||||
Sbjct: 6 ctccgccggggccgccgccgctcgcc 31
>gb|BM371934.2|BM371934 EBma08_SQ004_H03_R maternal, 28 DPA, no treatment, cv Optic, EBma08
Hordeum vulgare subsp. vulgare cDNA clone
EBma08_SQ004_H03 5', mRNA sequence
Length = 380
Score = 36.2 bits (18), Expect = 3.7
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 1688 ggtgccgccgccgctcgc 1705
||||||||||||||||||
Sbjct: 73 ggtgccgccgccgctcgc 56
>gb|BU970520.1|BU970520 HB14O07r BC Hordeum vulgare subsp. vulgare cDNA clone HB14O07
5-PRIME, mRNA sequence
Length = 657
Score = 36.2 bits (18), Expect = 3.7
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 1375 aaaatgatgagaaaatgt 1392
||||||||||||||||||
Sbjct: 627 aaaatgatgagaaaatgt 644
>gb|BU974841.1|BU974841 HB29E10r BC Hordeum vulgare subsp. vulgare cDNA clone HB29E10
5-PRIME, mRNA sequence
Length = 242
Score = 36.2 bits (18), Expect = 3.7
Identities = 33/38 (86%)
Strand = Plus / Minus
Query: 441 ccgcccggcatctcgtcgtcctcctcgtacgcctcctg 478
||||||||||| || |||||||| || || ||||||||
Sbjct: 82 ccgcccggcatatcctcgtcctcgtcataggcctcctg 45
>gb|BJ548203.1|BJ548203 BJ548203 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal14i23 3', mRNA sequence
Length = 156
Score = 36.2 bits (18), Expect = 3.7
Identities = 33/38 (86%)
Strand = Plus / Plus
Query: 441 ccgcccggcatctcgtcgtcctcctcgtacgcctcctg 478
||||||||||| || |||||||| || || ||||||||
Sbjct: 71 ccgcccggcatatcctcgtcctcgtcataggcctcctg 108
Database: Hordeum_nucl_with_EST.fasta
Posted date: May 2, 2006 2:38 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 248,765
Number of Sequences: 312970
Number of extensions: 248765
Number of successful extensions: 68969
Number of sequences better than 10.0: 232
Number of HSP's better than 10.0 without gapping: 232
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 68059
Number of HSP's gapped (non-prelim): 682
length of query: 1723
length of database: 175,134,539
effective HSP length: 19
effective length of query: 1704
effective length of database: 169,188,109
effective search space: 288296537736
effective search space used: 288296537736
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)