BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2161272.2.21
(693 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BE601754.2|BE601754 HVSMEh0099G19f Hordeum vulgare 5-45 ... 60 1e-007
gb|BU976210.1|BU976210 HA03F10r HA Hordeum vulgare subsp. v... 60 1e-007
gb|BU970797.1|BU970797 HB15L12r BC Hordeum vulgare subsp. v... 56 2e-006
gb|BQ468641.1|BQ468641 HM01N16T HM Hordeum vulgare subsp. v... 50 1e-004
gb|BM371350.1|BM371350 EBma08_SQ002_G09_R maternal, 28 DPA,... 48 4e-004
gb|BM371364.1|BM371364 EBma08_SQ002_H03_R maternal, 28 DPA,... 48 4e-004
gb|BM371365.1|BM371365 EBma08_SQ002_H04_R maternal, 28 DPA,... 48 4e-004
gb|BM371395.1|BM371395 EBma08_SQ002_J02_R maternal, 28 DPA,... 48 4e-004
gb|BM371412.1|BM371412 EBma08_SQ002_K03_R maternal, 28 DPA,... 48 4e-004
gb|BM371462.1|BM371462 EBma08_SQ002_N04_R maternal, 28 DPA,... 48 4e-004
gb|BM376006.1|BM376006 EBma01_SQ002_B01_R maternal, 4 DPA, ... 48 4e-004
gb|BM376095.1|BM376095 EBma01_SQ002_F10_R maternal, 4 DPA, ... 48 4e-004
gb|BM376112.1|BM376112 EBma01_SQ002_G07_R maternal, 4 DPA, ... 48 4e-004
gb|BM376096.2|BM376096 EBma01_SQ002_F11_R maternal, 4 DPA, ... 48 4e-004
gb|BM376175.2|BM376175 EBma01_SQ002_J04_R maternal, 4 DPA, ... 48 4e-004
gb|BM376199.2|BM376199 EBma01_SQ002_K09_R maternal, 4 DPA, ... 48 4e-004
gb|BM376260.2|BM376260 EBma01_SQ002_N09_R maternal, 4 DPA, ... 48 4e-004
gb|BM376261.2|BM376261 EBma01_SQ002_N10_R maternal, 4 DPA, ... 48 4e-004
gb|BM376262.2|BM376262 EBma01_SQ002_N11_R maternal, 4 DPA, ... 48 4e-004
gb|BM371381.2|BM371381 EBma08_SQ002_I05_R maternal, 28 DPA,... 48 4e-004
gb|BM371428.2|BM371428 EBma08_SQ002_L03_R maternal, 28 DPA,... 48 4e-004
gb|BQ134680.1|BQ134680 LP30153 Lemma/palea-enriched cDNA li... 46 0.002
gb|BM376094.2|BM376094 EBma01_SQ002_F09_R maternal, 4 DPA, ... 46 0.002
gb|BM371400.1|BM371400 EBma08_SQ002_J07_R maternal, 28 DPA,... 42 0.024
gb|BM371413.1|BM371413 EBma08_SQ002_K05_R maternal, 28 DPA,... 42 0.024
gb|BM376133.1|BM376133 EBma01_SQ002_H07_R maternal, 4 DPA, ... 42 0.024
gb|BQ134691.1|BQ134691 LP30188 Lemma/palea-enriched cDNA li... 42 0.024
gb|BQ134696.1|BQ134696 LP20015 Lemma/palea-enriched cDNA li... 42 0.024
gb|BQ294513.1|BQ294513 LP10226 Lemma/palea-enriched cDNA li... 42 0.024
gb|BQ294528.1|BQ294528 LP10288 Lemma/palea-enriched cDNA li... 42 0.024
gb|BM371382.2|BM371382 EBma08_SQ002_I06_R maternal, 28 DPA,... 42 0.024
gb|BQ135350.1|BQ135350 LP10104 Lemma/palea-enriched cDNA li... 40 0.094
gb|BF257586.2|BF257586 HVSMEf0013E13f Hordeum vulgare seedl... 38 0.37
gb|BU978697.1|BU978697 HA14A09r HA Hordeum vulgare subsp. v... 38 0.37
gb|BU997130.1|BU997130 HI07A02r HI Hordeum vulgare subsp. v... 38 0.37
gb|BU997151.1|BU997151 HI07B06r HI Hordeum vulgare subsp. v... 38 0.37
gb|AJ582221.1|AJ582221 AJ582221 Hordeum vulgare subsp. vulg... 38 0.37
>gb|BE601754.2|BE601754 HVSMEh0099G19f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0099G19f, mRNA sequence
Length = 505
Score = 60.0 bits (30), Expect = 1e-007
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 177 gtgaagaactggttcaccttcaacgagcca 206
||||||||||||||||||||||||||||||
Sbjct: 290 gtgaagaactggttcaccttcaacgagcca 319
>gb|BU976210.1|BU976210 HA03F10r HA Hordeum vulgare subsp. vulgare cDNA clone HA03F10
5-PRIME, mRNA sequence
Length = 571
Score = 60.0 bits (30), Expect = 1e-007
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 177 gtgaagaactggttcaccttcaacgagcca 206
||||||||||||||||||||||||||||||
Sbjct: 152 gtgaagaactggttcaccttcaacgagcca 181
>gb|BU970797.1|BU970797 HB15L12r BC Hordeum vulgare subsp. vulgare cDNA clone HB15L12
5-PRIME, mRNA sequence
Length = 587
Score = 56.0 bits (28), Expect = 2e-006
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 179 gaagaactggttcaccttcaacgagcca 206
||||||||||||||||||||||||||||
Sbjct: 11 gaagaactggttcaccttcaacgagcca 38
>gb|BQ468641.1|BQ468641 HM01N16T HM Hordeum vulgare subsp. vulgare cDNA clone HM01N16
5-PRIME, mRNA sequence
Length = 632
Score = 50.1 bits (25), Expect = 1e-004
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 177 gtgaagaactggttcaccttcaacgagcc 205
|||||||||||||||||| ||||||||||
Sbjct: 246 gtgaagaactggttcaccatcaacgagcc 274
>gb|BM371350.1|BM371350 EBma08_SQ002_G09_R maternal, 28 DPA, no treatment, cv Optic, EBma08
Hordeum vulgare subsp. vulgare cDNA clone
EBma08_SQ002_G09 5', mRNA sequence
Length = 392
Score = 48.1 bits (24), Expect = 4e-004
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 670 agtacctcggccgcgaccacgcta 693
||||||||||||||||||||||||
Sbjct: 312 agtacctcggccgcgaccacgcta 335
>gb|BM371364.1|BM371364 EBma08_SQ002_H03_R maternal, 28 DPA, no treatment, cv Optic, EBma08
Hordeum vulgare subsp. vulgare cDNA clone
EBma08_SQ002_H03 5', mRNA sequence
Length = 392
Score = 48.1 bits (24), Expect = 4e-004
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 670 agtacctcggccgcgaccacgcta 693
||||||||||||||||||||||||
Sbjct: 312 agtacctcggccgcgaccacgcta 335
>gb|BM371365.1|BM371365 EBma08_SQ002_H04_R maternal, 28 DPA, no treatment, cv Optic, EBma08
Hordeum vulgare subsp. vulgare cDNA clone
EBma08_SQ002_H04 5', mRNA sequence
Length = 393
Score = 48.1 bits (24), Expect = 4e-004
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 670 agtacctcggccgcgaccacgcta 693
||||||||||||||||||||||||
Sbjct: 313 agtacctcggccgcgaccacgcta 336
>gb|BM371395.1|BM371395 EBma08_SQ002_J02_R maternal, 28 DPA, no treatment, cv Optic, EBma08
Hordeum vulgare subsp. vulgare cDNA clone
EBma08_SQ002_J02 5', mRNA sequence
Length = 392
Score = 48.1 bits (24), Expect = 4e-004
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 670 agtacctcggccgcgaccacgcta 693
||||||||||||||||||||||||
Sbjct: 312 agtacctcggccgcgaccacgcta 335
>gb|BM371412.1|BM371412 EBma08_SQ002_K03_R maternal, 28 DPA, no treatment, cv Optic, EBma08
Hordeum vulgare subsp. vulgare cDNA clone
EBma08_SQ002_K03 5', mRNA sequence
Length = 393
Score = 48.1 bits (24), Expect = 4e-004
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 670 agtacctcggccgcgaccacgcta 693
||||||||||||||||||||||||
Sbjct: 313 agtacctcggccgcgaccacgcta 336
>gb|BM371462.1|BM371462 EBma08_SQ002_N04_R maternal, 28 DPA, no treatment, cv Optic, EBma08
Hordeum vulgare subsp. vulgare cDNA clone
EBma08_SQ002_N04 5', mRNA sequence
Length = 393
Score = 48.1 bits (24), Expect = 4e-004
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 670 agtacctcggccgcgaccacgcta 693
||||||||||||||||||||||||
Sbjct: 313 agtacctcggccgcgaccacgcta 336
>gb|BM376006.1|BM376006 EBma01_SQ002_B01_R maternal, 4 DPA, no treatment, cv Optic, EBma01
Hordeum vulgare subsp. vulgare cDNA clone
EBma01_SQ002_B01 5', mRNA sequence
Length = 393
Score = 48.1 bits (24), Expect = 4e-004
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 670 agtacctcggccgcgaccacgcta 693
||||||||||||||||||||||||
Sbjct: 313 agtacctcggccgcgaccacgcta 336
>gb|BM376095.1|BM376095 EBma01_SQ002_F10_R maternal, 4 DPA, no treatment, cv Optic, EBma01
Hordeum vulgare subsp. vulgare cDNA clone
EBma01_SQ002_F10 5', mRNA sequence
Length = 393
Score = 48.1 bits (24), Expect = 4e-004
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 670 agtacctcggccgcgaccacgcta 693
||||||||||||||||||||||||
Sbjct: 313 agtacctcggccgcgaccacgcta 336
>gb|BM376112.1|BM376112 EBma01_SQ002_G07_R maternal, 4 DPA, no treatment, cv Optic, EBma01
Hordeum vulgare subsp. vulgare cDNA clone
EBma01_SQ002_G07 5', mRNA sequence
Length = 392
Score = 48.1 bits (24), Expect = 4e-004
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 670 agtacctcggccgcgaccacgcta 693
||||||||||||||||||||||||
Sbjct: 312 agtacctcggccgcgaccacgcta 335
>gb|BM376096.2|BM376096 EBma01_SQ002_F11_R maternal, 4 DPA, no treatment, cv Optic, EBma01
Hordeum vulgare subsp. vulgare cDNA clone
EBma01_SQ002_F11 5', mRNA sequence
Length = 399
Score = 48.1 bits (24), Expect = 4e-004
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 670 agtacctcggccgcgaccacgcta 693
||||||||||||||||||||||||
Sbjct: 347 agtacctcggccgcgaccacgcta 370
>gb|BM376175.2|BM376175 EBma01_SQ002_J04_R maternal, 4 DPA, no treatment, cv Optic, EBma01
Hordeum vulgare subsp. vulgare cDNA clone
EBma01_SQ002_J04 5', mRNA sequence
Length = 393
Score = 48.1 bits (24), Expect = 4e-004
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 670 agtacctcggccgcgaccacgcta 693
||||||||||||||||||||||||
Sbjct: 313 agtacctcggccgcgaccacgcta 336
>gb|BM376199.2|BM376199 EBma01_SQ002_K09_R maternal, 4 DPA, no treatment, cv Optic, EBma01
Hordeum vulgare subsp. vulgare cDNA clone
EBma01_SQ002_K09 5', mRNA sequence
Length = 396
Score = 48.1 bits (24), Expect = 4e-004
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 670 agtacctcggccgcgaccacgcta 693
||||||||||||||||||||||||
Sbjct: 347 agtacctcggccgcgaccacgcta 370
>gb|BM376260.2|BM376260 EBma01_SQ002_N09_R maternal, 4 DPA, no treatment, cv Optic, EBma01
Hordeum vulgare subsp. vulgare cDNA clone
EBma01_SQ002_N09 5', mRNA sequence
Length = 392
Score = 48.1 bits (24), Expect = 4e-004
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 670 agtacctcggccgcgaccacgcta 693
||||||||||||||||||||||||
Sbjct: 312 agtacctcggccgcgaccacgcta 335
>gb|BM376261.2|BM376261 EBma01_SQ002_N10_R maternal, 4 DPA, no treatment, cv Optic, EBma01
Hordeum vulgare subsp. vulgare cDNA clone
EBma01_SQ002_N10 5', mRNA sequence
Length = 406
Score = 48.1 bits (24), Expect = 4e-004
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 670 agtacctcggccgcgaccacgcta 693
||||||||||||||||||||||||
Sbjct: 347 agtacctcggccgcgaccacgcta 370
>gb|BM376262.2|BM376262 EBma01_SQ002_N11_R maternal, 4 DPA, no treatment, cv Optic, EBma01
Hordeum vulgare subsp. vulgare cDNA clone
EBma01_SQ002_N11 5', mRNA sequence
Length = 375
Score = 48.1 bits (24), Expect = 4e-004
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 670 agtacctcggccgcgaccacgcta 693
||||||||||||||||||||||||
Sbjct: 313 agtacctcggccgcgaccacgcta 336
>gb|BM371381.2|BM371381 EBma08_SQ002_I05_R maternal, 28 DPA, no treatment, cv Optic, EBma08
Hordeum vulgare subsp. vulgare cDNA clone
EBma08_SQ002_I05 5', mRNA sequence
Length = 581
Score = 48.1 bits (24), Expect = 4e-004
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 670 agtacctcggccgcgaccacgcta 693
||||||||||||||||||||||||
Sbjct: 102 agtacctcggccgcgaccacgcta 79
>gb|BM371428.2|BM371428 EBma08_SQ002_L03_R maternal, 28 DPA, no treatment, cv Optic, EBma08
Hordeum vulgare subsp. vulgare cDNA clone
EBma08_SQ002_L03 5', mRNA sequence
Length = 413
Score = 48.1 bits (24), Expect = 4e-004
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 670 agtacctcggccgcgaccacgcta 693
||||||||||||||||||||||||
Sbjct: 333 agtacctcggccgcgaccacgcta 356
>gb|BQ134680.1|BQ134680 LP30153 Lemma/palea-enriched cDNA library from dough stage of
kernel Hordeum vulgare subsp. vulgare cDNA clone 3-153
similar to Hexaprenyldihydroxybenzoate
methyltransferase,(S)-scoulerine 9-O-methyltransferase,
mRNA sequence
Length = 255
Score = 46.1 bits (23), Expect = 0.002
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 671 gtacctcggccgcgaccacgcta 693
|||||||||||||||||||||||
Sbjct: 180 gtacctcggccgcgaccacgcta 202
>gb|BM376094.2|BM376094 EBma01_SQ002_F09_R maternal, 4 DPA, no treatment, cv Optic, EBma01
Hordeum vulgare subsp. vulgare cDNA clone
EBma01_SQ002_F09 5', mRNA sequence
Length = 387
Score = 46.1 bits (23), Expect = 0.002
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 671 gtacctcggccgcgaccacgcta 693
|||||||||||||||||||||||
Sbjct: 101 gtacctcggccgcgaccacgcta 79
>gb|BM371400.1|BM371400 EBma08_SQ002_J07_R maternal, 28 DPA, no treatment, cv Optic, EBma08
Hordeum vulgare subsp. vulgare cDNA clone
EBma08_SQ002_J07 5', mRNA sequence
Length = 379
Score = 42.1 bits (21), Expect = 0.024
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 673 acctcggccgcgaccacgcta 693
|||||||||||||||||||||
Sbjct: 302 acctcggccgcgaccacgcta 322
>gb|BM371413.1|BM371413 EBma08_SQ002_K05_R maternal, 28 DPA, no treatment, cv Optic, EBma08
Hordeum vulgare subsp. vulgare cDNA clone
EBma08_SQ002_K05 5', mRNA sequence
Length = 379
Score = 42.1 bits (21), Expect = 0.024
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 673 acctcggccgcgaccacgcta 693
|||||||||||||||||||||
Sbjct: 302 acctcggccgcgaccacgcta 322
>gb|BM376133.1|BM376133 EBma01_SQ002_H07_R maternal, 4 DPA, no treatment, cv Optic, EBma01
Hordeum vulgare subsp. vulgare cDNA clone
EBma01_SQ002_H07 5', mRNA sequence
Length = 422
Score = 42.1 bits (21), Expect = 0.024
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 673 acctcggccgcgaccacgcta 693
|||||||||||||||||||||
Sbjct: 99 acctcggccgcgaccacgcta 79
>gb|BQ134691.1|BQ134691 LP30188 Lemma/palea-enriched cDNA library from dough stage of
kernel Hordeum vulgare subsp. vulgare cDNA clone 3-188
similar to Germin, mRNA sequence
Length = 557
Score = 42.1 bits (21), Expect = 0.024
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 673 acctcggccgcgaccacgcta 693
|||||||||||||||||||||
Sbjct: 482 acctcggccgcgaccacgcta 502
>gb|BQ134696.1|BQ134696 LP20015 Lemma/palea-enriched cDNA library from gelatinous stage of
kernel Hordeum vulgare subsp. vulgare cDNA clone 2-15
similar to S-adenosylmethionine decarboxylase, mRNA
sequence
Length = 430
Score = 42.1 bits (21), Expect = 0.024
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 673 acctcggccgcgaccacgcta 693
|||||||||||||||||||||
Sbjct: 406 acctcggccgcgaccacgcta 426
>gb|BQ294513.1|BQ294513 LP10226 Lemma/palea-enriched cDNA library from elongation stage of
kernel Hordeum vulgare subsp. vulgare cDNA clone 1-226,
mRNA sequence
Length = 587
Score = 42.1 bits (21), Expect = 0.024
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 673 acctcggccgcgaccacgcta 693
|||||||||||||||||||||
Sbjct: 515 acctcggccgcgaccacgcta 535
>gb|BQ294528.1|BQ294528 LP10288 Lemma/palea-enriched cDNA library from elongation stage of
kernel Hordeum vulgare subsp. vulgare cDNA clone 1-288,
mRNA sequence
Length = 310
Score = 42.1 bits (21), Expect = 0.024
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 673 acctcggccgcgaccacgcta 693
|||||||||||||||||||||
Sbjct: 286 acctcggccgcgaccacgcta 306
>gb|BM371382.2|BM371382 EBma08_SQ002_I06_R maternal, 28 DPA, no treatment, cv Optic, EBma08
Hordeum vulgare subsp. vulgare cDNA clone
EBma08_SQ002_I06 5', mRNA sequence
Length = 494
Score = 42.1 bits (21), Expect = 0.024
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 673 acctcggccgcgaccacgcta 693
|||||||||||||||||||||
Sbjct: 99 acctcggccgcgaccacgcta 79
>gb|BQ135350.1|BQ135350 LP10104 Lemma/palea-enriched cDNA library from elongation stage of
kernel Hordeum vulgare subsp. vulgare cDNA clone 1-104
similar to Arabidopsis putative tyrosyl-tRNA synthetase,
Accession No. AY075664, mRNA sequence
Length = 427
Score = 40.1 bits (20), Expect = 0.094
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 674 cctcggccgcgaccacgcta 693
||||||||||||||||||||
Sbjct: 356 cctcggccgcgaccacgcta 375
>gb|BF257586.2|BF257586 HVSMEf0013E13f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0013E13f, mRNA sequence
Length = 521
Score = 38.2 bits (19), Expect = 0.37
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 180 aagaactggttcaccttcaacgagcca 206
|||||||||||||| ||||| ||||||
Sbjct: 411 aagaactggttcacattcaatgagcca 437
>gb|BU978697.1|BU978697 HA14A09r HA Hordeum vulgare subsp. vulgare cDNA clone HA14A09
5-PRIME, mRNA sequence
Length = 637
Score = 38.2 bits (19), Expect = 0.37
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 180 aagaactggttcaccttcaacgagcca 206
|||||||||||||| ||||| ||||||
Sbjct: 363 aagaactggttcacattcaatgagcca 389
>gb|BU997130.1|BU997130 HI07A02r HI Hordeum vulgare subsp. vulgare cDNA clone HI07A02
5-PRIME, mRNA sequence
Length = 632
Score = 38.2 bits (19), Expect = 0.37
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 180 aagaactggttcaccttcaacgagcca 206
|||||||||||||| ||||| ||||||
Sbjct: 267 aagaactggttcacattcaatgagcca 293
>gb|BU997151.1|BU997151 HI07B06r HI Hordeum vulgare subsp. vulgare cDNA clone HI07B06
5-PRIME, mRNA sequence
Length = 614
Score = 38.2 bits (19), Expect = 0.37
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 180 aagaactggttcaccttcaacgagcca 206
|||||||||||||| ||||| ||||||
Sbjct: 435 aagaactggttcacattcaatgagcca 461
>gb|AJ582221.1|AJ582221 AJ582221 Hordeum vulgare subsp. vulgare 7 d after germination
Hordeum vulgare subsp. vulgare cDNA clone CJP121, mRNA
sequence
Length = 723
Score = 38.2 bits (19), Expect = 0.37
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 675 ctcggccgcgaccacgcta 693
|||||||||||||||||||
Sbjct: 51 ctcggccgcgaccacgcta 33
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 57,053
Number of Sequences: 312970
Number of extensions: 57053
Number of successful extensions: 14680
Number of sequences better than 0.5: 38
Number of HSP's better than 0.5 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 14639
Number of HSP's gapped (non-prelim): 41
length of query: 693
length of database: 175,134,539
effective HSP length: 19
effective length of query: 674
effective length of database: 169,188,109
effective search space: 114032785466
effective search space used: 114032785466
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)