BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1804918.2.4
(634 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CV053949.1|CV053949 BNEL105a3 Barley EST endosperm libra... 668 0.0
gb|CV063097.1|CV063097 BNEL86f11 Barley EST endosperm libra... 668 0.0
gb|CV061330.1|CV061330 BNEL67f10 Barley EST endosperm libra... 660 0.0
gb|CV054920.1|CV054920 BNEL114g5 Barley EST endosperm libra... 652 0.0
gb|AV924891.1|AV924891 AV924891 K. Sato unpublished cDNA li... 648 0.0
gb|BF255515.3|BF255515 HVSMEf0007B02f Hordeum vulgare seedl... 644 0.0
gb|BQ459945.1|BQ459945 HA07K12r HA Hordeum vulgare subsp. v... 644 0.0
gb|BQ470985.1|BQ470985 HX04K02r HX Hordeum vulgare subsp. v... 644 0.0
gb|BU980059.1|BU980059 HA18G17r HA Hordeum vulgare subsp. v... 644 0.0
gb|BU999623.1|BU999623 HI15C06r HI Hordeum vulgare subsp. v... 644 0.0
gb|BU999713.1|BU999713 HI15H11r HI Hordeum vulgare subsp. v... 644 0.0
gb|CA029980.1|CA029980 HX05M02r HX Hordeum vulgare subsp. v... 644 0.0
gb|CK122992.1|CK122992 BES1824101k24 BES1824 Hordeum vulgar... 644 0.0
gb|CK123200.1|CK123200 BES1824102h12 BES1824 Hordeum vulgar... 644 0.0
gb|CK122355.1|CK122355 BES1824102p21 BES1824 Hordeum vulgar... 642 0.0
gb|BF257334.2|BF257334 HVSMEf0012J10f Hordeum vulgare seedl... 640 0.0
gb|BM098049.2|BM098049 EBpi03_SQ002_G11_R pistil, 4 DPA, no... 632 e-180
gb|BI953596.1|BI953596 HVSMEm0013I04f Hordeum vulgare green... 628 e-179
gb|BG367786.2|BG367786 HVSMEi0013K16f Hordeum vulgare 20 DA... 622 e-177
gb|BE195706.2|BE195706 HVSMEh0090D15f Hordeum vulgare 5-45 ... 618 e-176
gb|CK122756.1|CK122756 BES1824105k19 BES1824 Hordeum vulgar... 615 e-175
gb|CA022949.1|CA022949 HZ44N01r HZ Hordeum vulgare subsp. v... 613 e-174
gb|BQ759877.1|BQ759877 EBpi05_SQ004_O13_R pistil, 8 DPA, no... 607 e-172
gb|CK122185.1|CK122185 BES1824101p07 BES1824 Hordeum vulgar... 605 e-172
gb|BM098109.2|BM098109 EBpi03_SQ002_J07_R pistil, 4 DPA, no... 601 e-170
gb|BM100041.2|BM100041 EBes01_SQ004_P21_R embryo sac, 4-6 D... 597 e-169
gb|BF628424.2|BF628424 HVSMEb0003P23f Hordeum vulgare seedl... 593 e-168
gb|AV920279.1|AV920279 AV920279 K. Sato unpublished cDNA li... 593 e-168
gb|BF628416.2|BF628416 HVSMEb0003P15f Hordeum vulgare seedl... 589 e-167
gb|CA022995.1|CA022995 HZ44P03r HZ Hordeum vulgare subsp. v... 589 e-167
gb|CV057618.1|CV057618 BNEL29h11 Barley EST endosperm libra... 589 e-167
gb|BQ464114.1|BQ464114 HF01G09T HF Hordeum vulgare subsp. v... 571 e-161
gb|BQ664912.1|BQ664912 HX01G01w HX Hordeum vulgare subsp. v... 569 e-161
gb|BM096590.2|BM096590 EBma05_SQ001_O19_R maternal, 12 DPA,... 565 e-160
gb|BE194732.1|BE194732 HVSMEh0086K19f Hordeum vulgare 5-45 ... 553 e-156
gb|AV915152.1|AV915152 AV915152 K. Sato unpublished cDNA li... 553 e-156
gb|AV911747.1|AV911747 AV911747 K. Sato unpublished cDNA li... 547 e-154
gb|BJ545838.1|BJ545838 BJ545838 K. Sato unpublished cDNA li... 547 e-154
gb|BQ665667.1|BQ665667 HX04K02u HX Hordeum vulgare subsp. v... 539 e-152
gb|AL503548.1|AL503548 AL503548 Hordeum vulgare Barke roots... 533 e-150
gb|CK124089.1|CK124089 BES1824107a20 BES1824 Hordeum vulgar... 533 e-150
gb|BF619747.3|BF619747 HVSMEc0009B10f Hordeum vulgare seedl... 531 e-150
gb|BM374592.1|BM374592 EBma05_SQ002_B13_R maternal, 12 DPA,... 531 e-150
gb|BQ458374.1|BQ458374 HA05G17r HA Hordeum vulgare subsp. v... 531 e-150
gb|BQ458524.1|BQ458524 HA04P14r HA Hordeum vulgare subsp. v... 531 e-150
gb|BQ466707.1|BQ466707 HS01F06T HS Hordeum vulgare subsp. v... 531 e-150
gb|BQ470975.1|BQ470975 HX04J16r HX Hordeum vulgare subsp. v... 531 e-150
gb|BQ767601.1|BQ767601 EBro08_SQ009_I07 _R root, 3 week, dr... 531 e-150
gb|BU977203.1|BU977203 HA11A06r HA Hordeum vulgare subsp. v... 531 e-150
gb|BU978132.1|BU978132 HA12K05r HA Hordeum vulgare subsp. v... 531 e-150
gb|BU983377.1|BU983377 HA29I04r HA Hordeum vulgare subsp. v... 531 e-150
gb|CA006707.1|CA006707 HU05H19r HU Hordeum vulgare subsp. v... 531 e-150
gb|CA007057.1|CA007057 HU06J18r HU Hordeum vulgare subsp. v... 531 e-150
gb|CA019720.1|CA019720 HV12O10r HV Hordeum vulgare subsp. v... 531 e-150
gb|CA023956.1|CA023956 HZ47O23r HZ Hordeum vulgare subsp. v... 531 e-150
gb|CA030937.1|CA030937 HX08J01r HX Hordeum vulgare subsp. v... 531 e-150
gb|CA031101.1|CA031101 HX09A09r HX Hordeum vulgare subsp. v... 531 e-150
gb|CA031980.1|CA031980 HX11K17r HX Hordeum vulgare subsp. v... 531 e-150
gb|CB883454.1|CB883454 HQ02F01w HQ Hordeum vulgare subsp. v... 531 e-150
gb|CV060577.1|CV060577 BNEL59f7 Barley EST endosperm librar... 531 e-150
gb|CV061210.1|CV061210 BNEL66b3 Barley EST endosperm librar... 531 e-150
gb|CV063910.1|CV063910 BNEL94e7 Barley EST endosperm librar... 531 e-150
gb|CK124346.1|CK124346 BES1824108h05 BES1824 Hordeum vulgar... 531 e-150
gb|CK124649.1|CK124649 BES1824109n23 BES1824 Hordeum vulgar... 531 e-150
gb|BU967403.1|BU967403 HB04D05r BC Hordeum vulgare subsp. v... 529 e-149
gb|BQ659690.1|BQ659690 HF01G09w HF Hordeum vulgare subsp. v... 527 e-148
gb|BE455738.3|BE455738 HVSMEg0019G24f Hordeum vulgare pre-a... 523 e-147
gb|BM368141.2|BM368141 EBed01_SQ002_E18_R endosperm, 6 DPA,... 523 e-147
gb|BI779707.2|BI779707 EBem05_SQ001_D12_R embryo, 14 DPA, n... 523 e-147
gb|BM098210.2|BM098210 EBpi03_SQ002_N20_R pistil, 4 DPA, no... 523 e-147
gb|BQ767958.1|BQ767958 EBro08_SQ010_F07_R root, 3 week, dro... 523 e-147
gb|BU976078.1|BU976078 HA03B15r HA Hordeum vulgare subsp. v... 523 e-147
gb|BU979818.1|BU979818 HA17H11r HA Hordeum vulgare subsp. v... 523 e-147
gb|CK124516.1|CK124516 BES1824109g19 BES1824 Hordeum vulgar... 521 e-147
gb|BM375262.2|BM375262 EBem06_SQ002_M17_R embryo, 21 DPA, n... 519 e-146
gb|BJ544383.1|BJ544383 BJ544383 K. Sato unpublished cDNA li... 519 e-146
gb|BM372785.2|BM372785 EBpi05_SQ003_O19_R pistil, 8 DPA, no... 517 e-145
gb|AV910268.1|AV910268 AV910268 K. Sato unpublished cDNA li... 515 e-145
gb|BU978534.1|BU978534 HA13I07r HA Hordeum vulgare subsp. v... 509 e-143
gb|AJ463098.1|AJ463098 AJ463098 S00002 Hordeum vulgare subs... 507 e-142
gb|BQ662245.1|BQ662245 HS01F06w HS Hordeum vulgare subsp. v... 507 e-142
gb|CB875675.1|CB875675 HX09A09w HX Hordeum vulgare subsp. v... 507 e-142
gb|CB876564.1|CB876564 HX11K17w HX Hordeum vulgare subsp. v... 507 e-142
gb|CB876973.1|CB876973 HP03B20T HP Hordeum vulgare subsp. v... 507 e-142
gb|BQ657616.1|BQ657616 HA07K12u HA Hordeum vulgare subsp. v... 505 e-142
gb|BM369295.2|BM369295 EBem07_SQ003_C18_R embryo, 28 DPA, n... 504 e-141
gb|BM373558.2|BM373558 EBma04_SQ004_O02_R maternal, 10 DPA,... 504 e-141
gb|CB875519.1|CB875519 HX08J01w HX Hordeum vulgare subsp. v... 502 e-141
gb|CK122687.1|CK122687 BES1824105h17 BES1824 Hordeum vulgar... 500 e-140
gb|CK125634.1|CK125634 BES1824109e18 BES1824 Hordeum vulgar... 500 e-140
gb|BF625259.2|BF625259 HVSMEa0008B17f Hordeum vulgare seedl... 494 e-138
gb|BQ469942.1|BQ469942 HX01F01T HX Hordeum vulgare subsp. v... 490 e-137
gb|AV929985.1|AV929985 AV929985 K. Sato unpublished cDNA li... 486 e-136
gb|BQ762160.1|BQ762160 EBro01_SQ005_B02 _R root, 3 week, hy... 484 e-135
gb|CK123228.1|CK123228 BES1824102l02 BES1824 Hordeum vulgar... 484 e-135
gb|BQ754099.1|BQ754099 EBca01_SQ002_N10_R carpel, pre-anthe... 476 e-133
gb|CV057002.1|CV057002 BNEL22h9 Barley EST endosperm librar... 476 e-133
gb|CA031053.1|CA031053 HX08O02r HX Hordeum vulgare subsp. v... 472 e-132
gb|CB874600.1|CB874600 HX05M02w HX Hordeum vulgare subsp. v... 470 e-131
gb|BU980636.1|BU980636 HA21D20r HA Hordeum vulgare subsp. v... 466 e-130
gb|BU999125.1|BU999125 HI13F19r HI Hordeum vulgare subsp. v... 466 e-130
gb|BQ762511.1|BQ762511 EBro02_SQ004_H06 _R root, 3 week, hy... 464 e-129
gb|BF622846.3|BF622846 HVSMEa0009G17f Hordeum vulgare seedl... 460 e-128
gb|BG368630.1|BG368630 HVSMEi0020A10f Hordeum vulgare 20 DA... 458 e-127
gb|BI779799.2|BI779799 EBem05_SQ001_M18_R embryo, 14 DPA, n... 458 e-127
gb|BM368831.2|BM368831 EBem08_SQ004_L15_R embryo, 40 DPA, n... 456 e-127
gb|BQ767970.1|BQ767970 EBro08_SQ010_H07_R root, 3 week, dro... 444 e-123
gb|CA004874.1|CA004874 HS18O23r HS Hordeum vulgare subsp. v... 444 e-123
gb|BQ756224.1|BQ756224 EBem06_SQ002_D11_R embryo, 21 DPA, n... 442 e-123
gb|BQ467023.1|BQ467023 HS02F06r HS Hordeum vulgare subsp. v... 434 e-120
gb|BM375350.2|BM375350 EBem06_SQ003_B12_R embryo, 21 DPA, n... 434 e-120
gb|BM369879.2|BM369879 EBem07_SQ004_N24_R embryo, 28 DPA, n... 434 e-120
gb|BI777759.2|BI777759 EBro08_SQ001_O04_R root, 3 week, dro... 434 e-120
gb|CA019856.1|CA019856 HV13H06r HV Hordeum vulgare subsp. v... 434 e-120
gb|AJ463100.1|AJ463100 AJ463100 S00002 Hordeum vulgare subs... 428 e-119
gb|BQ764518.1|BQ764518 EBca01_SQ004_I04_R carpel, pre-anthe... 426 e-118
gb|BG342957.2|BG342957 HVSMEg0001H12f Hordeum vulgare pre-a... 410 e-113
gb|BF255314.2|BF255314 HVSMEf0006I11f Hordeum vulgare seedl... 404 e-111
gb|BG299894.2|BG299894 HVSMEa0022F21f Hordeum vulgare seedl... 402 e-111
gb|CA029859.1|CA029859 HX05G16r HX Hordeum vulgare subsp. v... 402 e-111
gb|AL500960.1|AL500960 AL500960 Hordeum vulgare Barke roots... 400 e-110
gb|BF264098.2|BF264098 HV_CEa0008I10f Hordeum vulgare seedl... 394 e-108
gb|AJ432444.1|AJ432444 AJ432444 S00002 Hordeum vulgare subs... 389 e-107
gb|AV912425.1|AV912425 AV912425 K. Sato unpublished cDNA li... 383 e-105
gb|BU976079.1|BU976079 HA03B15u HA Hordeum vulgare subsp. v... 381 e-104
gb|CA030856.1|CA030856 HX08F09r HX Hordeum vulgare subsp. v... 381 e-104
gb|AJ435951.1|AJ435951 AJ435951 S00002 Hordeum vulgare subs... 379 e-104
gb|BU979925.1|BU979925 HA17N05r HA Hordeum vulgare subsp. v... 377 e-103
gb|CA032292.1|CA032292 HX12J14r HX Hordeum vulgare subsp. v... 377 e-103
gb|AV911198.1|AV911198 AV911198 K. Sato unpublished cDNA li... 357 3e-097
gb|BQ755167.1|BQ755167 EBed02_SQ003_O18_R endosperm, 8 DPA,... 351 2e-095
gb|CK123959.1|CK123959 BES1824106e19 BES1824 Hordeum vulgar... 347 3e-094
gb|BU978133.1|BU978133 HA12K05u HA Hordeum vulgare subsp. v... 345 1e-093
gb|BE215239.2|BE215239 HV_CEb0006E01f Hordeum vulgare seedl... 343 4e-093
gb|AV909312.1|AV909312 AV909312 K. Sato unpublished cDNA li... 343 4e-093
gb|CK123472.1|CK123472 BES1824104c09 BES1824 Hordeum vulgar... 341 2e-092
gb|AJ432789.1|AJ432789 AJ432789 S00002 Hordeum vulgare subs... 325 1e-087
gb|AJ460655.1|AJ460655 AJ460655 S00002 Hordeum vulgare subs... 325 1e-087
gb|BQ656304.1|BQ656304 HA04P14u HA Hordeum vulgare subsp. v... 325 1e-087
gb|BQ658173.1|BQ658173 HA05G17u HA Hordeum vulgare subsp. v... 325 1e-087
gb|BU983290.1|BU983290 HA29D07r HA Hordeum vulgare subsp. v... 325 1e-087
gb|CA017346.1|CA017346 HV12O10u HV Hordeum vulgare subsp. v... 325 1e-087
gb|AJ462277.1|AJ462277 AJ462277 S00002 Hordeum vulgare subs... 319 6e-086
gb|AJ433433.1|AJ433433 AJ433433 S00002 Hordeum vulgare subs... 313 4e-084
gb|CA027611.1|CA027611 HZ59H14r HZ Hordeum vulgare subsp. v... 313 4e-084
gb|AJ434988.1|AJ434988 AJ434988 S00002 Hordeum vulgare subs... 309 6e-083
gb|BQ755124.1|BQ755124 EBed02_SQ003_M17_R endosperm, 8 DPA,... 309 6e-083
gb|CA026383.1|CA026383 HZ55M05r HZ Hordeum vulgare subsp. v... 309 6e-083
gb|CB875269.1|CB875269 HX07M13w HX Hordeum vulgare subsp. v... 309 6e-083
gb|BE421747.1|BE421747 HWM014cA.03r ITEC HWM Barley Leaf Li... 307 2e-082
gb|AJ460658.1|AJ460658 AJ460658 S00002 Hordeum vulgare subs... 301 1e-080
gb|AJ460654.1|AJ460654 AJ460654 S00002 Hordeum vulgare subs... 297 2e-079
gb|AJ463099.1|AJ463099 AJ463099 S00002 Hordeum vulgare subs... 293 4e-078
gb|BM377032.2|BM377032 EBem05_SQ003_O19_R embryo, 14 DPA, n... 293 4e-078
gb|BU983860.1|BU983860 HA31E06r HA Hordeum vulgare subsp. v... 293 4e-078
gb|BE411011.1|BE411011 ISC001.D08F990325 ITEC ISC Barley Le... 289 6e-077
gb|CB881936.1|CB881936 HM11F14w HM Hordeum vulgare subsp. v... 287 2e-076
gb|AW982614.2|AW982614 HVSMEg0003L24f Hordeum vulgare pre-a... 278 2e-073
gb|BE196386.3|BE196386 HVSMEh0092C13f Hordeum vulgare 5-45 ... 278 2e-073
gb|CA001205.1|CA001205 HS18O23u HS Hordeum vulgare subsp. v... 278 2e-073
gb|CV060205.1|CV060205 BNEL55e9 Barley EST endosperm librar... 270 5e-071
gb|BQ664897.1|BQ664897 HX01F01w HX Hordeum vulgare subsp. v... 266 8e-070
gb|BQ467572.1|BQ467572 HS04D09r HS Hordeum vulgare subsp. v... 262 1e-068
gb|CB875626.1|CB875626 HX08O02w HX Hordeum vulgare subsp. v... 252 1e-065
gb|BU995780.1|BU995780 HM11F14r HM Hordeum vulgare subsp. v... 244 3e-063
gb|AJ462293.1|AJ462293 AJ462293 S00002 Hordeum vulgare subs... 224 3e-057
gb|BG414950.2|BG414950 HVSMEk0004G10f Hordeum vulgare testa... 220 4e-056
gb|AJ463101.1|AJ463101 AJ463101 S00002 Hordeum vulgare subs... 218 2e-055
gb|AJ462278.1|AJ462278 AJ462278 S00002 Hordeum vulgare subs... 216 7e-055
gb|BE194459.3|BE194459 HVSMEh0085K07f Hordeum vulgare 5-45 ... 212 1e-053
gb|BQ765455.1|BQ765455 EBro03_SQ007_P04_R root, 3 week, wat... 210 4e-053
gb|BE455197.3|BE455197 HVSMEh0096J02f Hordeum vulgare 5-45 ... 206 6e-052
gb|AJ460656.1|AJ460656 AJ460656 S00002 Hordeum vulgare subs... 196 6e-049
gb|AJ460657.1|AJ460657 AJ460657 S00002 Hordeum vulgare subs... 196 6e-049
gb|BM378015.1|BM378015 EBem04_SQ004_O12_R embryo, 12 DPA, n... 192 1e-047
gb|BQ469964.1|BQ469964 HX01G01T HX Hordeum vulgare subsp. v... 188 2e-046
gb|BU983899.1|BU983899 HA31G05r HA Hordeum vulgare subsp. v... 178 1e-043
gb|AJ434157.1|AJ434157 AJ434157 S00002 Hordeum vulgare subs... 174 2e-042
gb|BU978355.1|BU978355 HA12P19u HA Hordeum vulgare subsp. v... 167 6e-040
gb|BU979776.1|BU979776 HA17E08r HA Hordeum vulgare subsp. v... 159 1e-037
gb|AJ462292.1|AJ462292 AJ462292 S00002 Hordeum vulgare subs... 155 2e-036
gb|BQ757160.1|BQ757160 EBem10_SQ003_B23_R embryo, 2 Day ger... 155 2e-036
gb|BQ761576.1|BQ761576 EBem10_SQ001_L04_R embryo, 2 Day ger... 149 1e-034
gb|BU982520.1|BU982520 HA26M16r HA Hordeum vulgare subsp. v... 135 2e-030
gb|BF255165.3|BF255165 HVSMEf0006C03f Hordeum vulgare seedl... 127 5e-028
gb|BQ756399.1|BQ756399 EBem08_SQ002_E03_R embryo, 40 DPA, n... 123 7e-027
gb|BQ762450.1|BQ762450 EBro01_SQ005_K19_R root, 3 week, hyd... 121 3e-026
gb|AJ462291.1|AJ462291 AJ462291 S00002 Hordeum vulgare subs... 113 7e-024
gb|AJ434989.1|AJ434989 AJ434989 S00002 Hordeum vulgare subs... 111 3e-023
gb|CA006116.1|CA006116 HU05H19u HU Hordeum vulgare subsp. v... 103 7e-021
gb|BU979955.1|BU979955 HA17P04r HA Hordeum vulgare subsp. v... 96 2e-018
gb|BQ662424.1|BQ662424 HS02F06u HS Hordeum vulgare subsp. v... 94 7e-018
gb|BU980315.1|BU980315 HA20E24r HA Hordeum vulgare subsp. v... 94 7e-018
gb|BQ458655.1|BQ458655 HA04J15r HA Hordeum vulgare subsp. v... 88 4e-016
gb|BQ656407.1|BQ656407 HA04J15u HA Hordeum vulgare subsp. v... 88 4e-016
gb|BM098010.1|BM098010 EBpi03_SQ002_E19_R pistil, 4 DPA, no... 86 2e-015
gb|CA004314.1|CA004314 HS17D16r HS Hordeum vulgare subsp. v... 54 6e-006
gb|BJ547212.1|BJ547212 BJ547212 K. Sato unpublished cDNA li... 42 0.022
gb|BM097671.1|BM097671 EBem04_SQ002_F24_R embryo, 12 DPA, n... 38 0.34
gb|BU998852.1|BU998852 HI12F19r HI Hordeum vulgare subsp. v... 38 0.34
>gb|CV053949.1|CV053949 BNEL105a3 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL105a3 5' similar to
OSJNBa0093F12.16, mRNA sequence
Length = 709
Score = 668 bits (337), Expect = 0.0
Identities = 427/457 (93%)
Strand = Plus / Minus
Query: 175 gcctttaagctgaggggatctcgacctcaccatcatcgatctcctgctgcaagtccttgg 234
|||||||||| ||||||||||||||||| || || ||||||||| ||||| ||||||||
Sbjct: 555 gcctttaagcagaggggatctcgacctcgccgtcgtcgatctccgtctgcaggtccttgg 496
Query: 235 ggtccttcccatcgacggtgcacccgacgctgacgcaggtccccaggatctccttgacgg 294
|||||||||| ||||||||||| || |||||||||||||| || ||||||||||||||||
Sbjct: 495 ggtccttcccgtcgacggtgcagccaacgctgacgcaggtgccgaggatctccttgacgg 436
Query: 295 tcccggccaactccttggccatggacctgttccgcatggtcttggcgatctcgatgacgt 354
||||||||| ||||||||||||||||||| || |||| |||||||||||||||||||||
Sbjct: 435 tcccggccatctccttggccatggacctggtcttcatgatcttggcgatctcgatgacgt 376
Query: 355 cgtcgaggctgatgttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgg 414
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 375 cgtcgaggctgatgttgccgttgtgcttgatgttcttgaccttcttcctgtccctctcgg 316
Query: 415 gttccttgagcgccttgatgacgagcgccgcggcggaggggacgacggagaccttggcct 474
| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 gctccttgagggacttgatgacgagcgccgcggcggaggggacgacggagaccttggcct 256
Query: 475 gccggttctgcacggtgagcttgacggtgacgcggaggcccttccagtccttggcggtct 534
| |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 255 gacggttctggacggtgagcttgacggtgacgcggaggcccttccagtccttggccgtct 196
Query: 535 ccttggcgatgtcctcgccgatcttcttcggggagagaccgagcgggccgatcttggggg 594
|||||||||||||||| ||||||||||| |||||||||||||| || |||||||||||||
Sbjct: 195 ccttggcgatgtcctcaccgatcttcttgggggagagaccgaggggaccgatcttggggg 136
Query: 595 ccagcgacgacgccgcgccgacctcgcctcccgtcac 631
| ||||||||||||||||||||||||||||| |||||
Sbjct: 135 cgagcgacgacgccgcgccgacctcgcctccggtcac 99
>gb|CV063097.1|CV063097 BNEL86f11 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL86f11 5' similar to
OSJNBa0093F12.16, mRNA sequence
Length = 692
Score = 668 bits (337), Expect = 0.0
Identities = 427/457 (93%)
Strand = Plus / Minus
Query: 175 gcctttaagctgaggggatctcgacctcaccatcatcgatctcctgctgcaagtccttgg 234
|||||||||| ||||||||||||||||| || || ||||||||| ||||| ||||||||
Sbjct: 566 gcctttaagcagaggggatctcgacctcgccgtcgtcgatctccgtctgcaggtccttgg 507
Query: 235 ggtccttcccatcgacggtgcacccgacgctgacgcaggtccccaggatctccttgacgg 294
|||||||||| ||||||||||| || |||||||||||||| || ||||||||||||||||
Sbjct: 506 ggtccttcccgtcgacggtgcagccaacgctgacgcaggtgccgaggatctccttgacgg 447
Query: 295 tcccggccaactccttggccatggacctgttccgcatggtcttggcgatctcgatgacgt 354
||||||||| ||||||||||||||||||| || |||| |||||||||||||||||||||
Sbjct: 446 tcccggccatctccttggccatggacctggtcttcatgatcttggcgatctcgatgacgt 387
Query: 355 cgtcgaggctgatgttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgg 414
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 386 cgtcgaggctgatgttgccgttgtgcttgatgttcttgaccttcttcctgtccctctcgg 327
Query: 415 gttccttgagcgccttgatgacgagcgccgcggcggaggggacgacggagaccttggcct 474
| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 gctccttgagggacttgatgacgagcgccgcggcggaggggacgacggagaccttggcct 267
Query: 475 gccggttctgcacggtgagcttgacggtgacgcggaggcccttccagtccttggcggtct 534
| |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 266 gacggttctggacggtgagcttgacggtgacgcggaggcccttccagtccttggccgtct 207
Query: 535 ccttggcgatgtcctcgccgatcttcttcggggagagaccgagcgggccgatcttggggg 594
|||||||||||||||| ||||||||||| |||||||||||||| || |||||||||||||
Sbjct: 206 ccttggcgatgtcctcaccgatcttcttgggggagagaccgaggggaccgatcttggggg 147
Query: 595 ccagcgacgacgccgcgccgacctcgcctcccgtcac 631
| ||||||||||||||||||||||||||||| |||||
Sbjct: 146 cgagcgacgacgccgcgccgacctcgcctccggtcac 110
>gb|CV061330.1|CV061330 BNEL67f10 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL67f10 5' similar to
OSJNBa0093F12.16, mRNA sequence
Length = 589
Score = 660 bits (333), Expect = 0.0
Identities = 426/457 (93%)
Strand = Plus / Minus
Query: 175 gcctttaagctgaggggatctcgacctcaccatcatcgatctcctgctgcaagtccttgg 234
|||||||||| ||||||||||||||||| || || ||||||||| ||||| ||||||||
Sbjct: 557 gcctttaagcagaggggatctcgacctcgccgtcgtcgatctccgtctgcaggtccttgg 498
Query: 235 ggtccttcccatcgacggtgcacccgacgctgacgcaggtccccaggatctccttgacgg 294
|||||||||| ||||||||||| || |||||||||||||| || ||||||||||||||||
Sbjct: 497 ggtccttcccgtcgacggtgcagccaacgctgacgcaggtgccgaggatctccttgacgg 438
Query: 295 tcccggccaactccttggccatggacctgttccgcatggtcttggcgatctcgatgacgt 354
||||||||| ||||||||||||||||||| || |||| |||||||||||||||||||||
Sbjct: 437 tcccggccatctccttggccatggacctggtcttcatgatcttggcgatctcgatgacgt 378
Query: 355 cgtcgaggctgatgttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgg 414
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 377 cgtcgaggctgatgttgccgttgtgcttgatgttcttgaccttcttcctgtccctctcgg 318
Query: 415 gttccttgagcgccttgatgacgagcgccgcggcggaggggacgacggagaccttggcct 474
| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 gctccttgagggacttgatgacgagcgccgcggcggaggggacgacggagaccttggcct 258
Query: 475 gccggttctgcacggtgagcttgacggtgacgcggaggcccttccagtccttggcggtct 534
| |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 257 gacggttctggacggtgagcttgacggtgacgcggaggcccttccagtccttggccgtct 198
Query: 535 ccttggcgatgtcctcgccgatcttcttcggggagagaccgagcgggccgatcttggggg 594
|||||||||||||||| ||||||||||| |||||||||||||| || |||||||||||||
Sbjct: 197 ccttggcgatgtcctcaccgatcttcttgggggagagaccgaggggaccgatcttggggg 138
Query: 595 ccagcgacgacgccgcgccgacctcgcctcccgtcac 631
| |||||||||||||||||| |||||||||| |||||
Sbjct: 137 cgagcgacgacgccgcgccggcctcgcctccggtcac 101
>gb|CV054920.1|CV054920 BNEL114g5 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL114g5 5' similar to
OSJNBa0093F12.16, mRNA sequence
Length = 708
Score = 652 bits (329), Expect = 0.0
Identities = 425/457 (92%)
Strand = Plus / Minus
Query: 175 gcctttaagctgaggggatctcgacctcaccatcatcgatctcctgctgcaagtccttgg 234
|||||||||| |||||||| |||||||| || || ||||||||| ||||| ||||||||
Sbjct: 557 gcctttaagcagaggggatttcgacctcgccgtcgtcgatctccgtctgcaggtccttgg 498
Query: 235 ggtccttcccatcgacggtgcacccgacgctgacgcaggtccccaggatctccttgacgg 294
|||||||||| ||||||||||| || |||||||||||||| || ||||||||||||||||
Sbjct: 497 ggtccttcccgtcgacggtgcagccaacgctgacgcaggtgccgaggatctccttgacgg 438
Query: 295 tcccggccaactccttggccatggacctgttccgcatggtcttggcgatctcgatgacgt 354
||||||||| ||||||||||||||||||| || |||| |||||||||||||||||||||
Sbjct: 437 tcccggccatctccttggccatggacctggtcttcatgatcttggcgatctcgatgacgt 378
Query: 355 cgtcgaggctgatgttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgg 414
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 377 cgtcgaggctgatgttgccgttgtgcttgatgttcttgaccttcttcctgtccctctcgg 318
Query: 415 gttccttgagcgccttgatgacgagcgccgcggcggaggggacgacggagaccttggcct 474
| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 gctccttgagggacttgatgacgagcgccgcggcggaggggacgacggagaccttggcct 258
Query: 475 gccggttctgcacggtgagcttgacggtgacgcggaggcccttccagtccttggcggtct 534
| |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 257 gacggttctggacggtgagcttgacggtgacgcggaggcccttccagtccttggccgtct 198
Query: 535 ccttggcgatgtcctcgccgatcttcttcggggagagaccgagcgggccgatcttggggg 594
|||||||||||||||| ||||||||||| |||||||||||||| || |||||||||||||
Sbjct: 197 ccttggcgatgtcctcaccgatcttcttgggggagagaccgaggggaccgatcttggggg 138
Query: 595 ccagcgacgacgccgcgccgacctcgcctcccgtcac 631
| |||||||||||||||||| |||||||||| |||||
Sbjct: 137 cgagcgacgacgccgcgccggcctcgcctccggtcac 101
>gb|AV924891.1|AV924891 AV924891 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd17f22 5', mRNA sequence
Length = 600
Score = 648 bits (327), Expect = 0.0
Identities = 426/458 (93%), Gaps = 1/458 (0%)
Strand = Plus / Minus
Query: 175 gcctttaagctgaggggatctcgacctcaccatcatcgatctcctgctgcaagtccttgg 234
|||||||||| ||||||||||||||||| || || ||||||||| ||||| ||||||||
Sbjct: 565 gcctttaagcagaggggatctcgacctcgccgtcgtcgatctccgtctgcaggtccttgg 506
Query: 235 ggtccttcccatcgacggtgcacccgacgctgacgcaggtccccaggatctccttgacgg 294
|||||||||| ||||||||||| || |||||||||||||| || ||||||||||||||||
Sbjct: 505 ggtccttcccgtcgacggtgcagccaacgctgacgcaggtgccgaggatctccttgacgg 446
Query: 295 tcccggccaactccttggccatggacctgttccgcatggtcttggcgatctcgatgacgt 354
||||||||| ||||||||||||||||||| || |||| |||||||||||||||||||||
Sbjct: 445 tcccggccatctccttggccatggacctggtcttcatgatcttggcgatctcgatgacgt 386
Query: 355 cgtcgaggctgatgttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgg 414
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cgtcgaggctgatgttgccgttgtgcttgatgttcttgaccttcttcctgtccctctcgg 326
Query: 415 gttccttgagcgccttgatgacgagcgccgcggcggaggggacgacggagaccttggcct 474
| |||||||| | ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 325 gctccttgagggacttgatgacgagcnccgcggcggaggggacgacggagaccttggcct 266
Query: 475 gccggttctgcacggtgagcttgacggtgacgcggaggcccttccagtccttggcggtc- 533
| |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 265 gacggttctggacggtgagcttgacggtgacgcggaggcccttccagtccttggccgtct 206
Query: 534 tccttggcgatgtcctcgccgatcttcttcggggagagaccgagcgggccgatcttgggg 593
||||||||||||||||| ||||||||||| |||||||||||||| || ||||||||||||
Sbjct: 205 tccttggcgatgtcctcaccgatcttcttgggggagagaccgaggggaccgatcttgggg 146
Query: 594 gccagcgacgacgccgcgccgacctcgcctcccgtcac 631
|| ||||||||||||||||||||||||||||| |||||
Sbjct: 145 gcgagcgacgacgccgcgccgacctcgcctccggtcac 108
>gb|BF255515.3|BF255515 HVSMEf0007B02f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0007B02f, mRNA sequence
Length = 787
Score = 644 bits (325), Expect = 0.0
Identities = 424/457 (92%)
Strand = Plus / Minus
Query: 175 gcctttaagctgaggggatctcgacctcaccatcatcgatctcctgctgcaagtccttgg 234
|||||||||| ||||||||||||||||| || || ||||||||| ||||| ||||||||
Sbjct: 563 gcctttaagcagaggggatctcgacctcgccgtcgtcgatctccgtctgcaggtccttgg 504
Query: 235 ggtccttcccatcgacggtgcacccgacgctgacgcaggtccccaggatctccttgacgg 294
|||||||||| ||||||||||| || |||||||||||||| || ||||||||||||||||
Sbjct: 503 ggtccttcccgtcgacggtgcagccaacgctgacgcaggtgccgaggatctccttgacgg 444
Query: 295 tcccggccaactccttggccatggacctgttccgcatggtcttggcgatctcgatgacgt 354
||||||||| ||||||||||||||||||| || |||| |||||||||||||||||||||
Sbjct: 443 tcccggccatctccttggccatggacctggtcttcatgatcttggcgatctcgatgacgt 384
Query: 355 cgtcgaggctgatgttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgg 414
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 383 cgtcgaggctgatgttgccgttgtgcttgatgttcttgaccttcttcctgtccctctcgg 324
Query: 415 gttccttgagcgccttgatgacgagcgccgcggcggaggggacgacggagaccttggcct 474
| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 gctccttgagggacttgatgacgagcgccgcggcggaggggacgacggagaccttggcct 264
Query: 475 gccggttctgcacggtgagcttgacggtgacgcggaggcccttccagtccttggcggtct 534
| |||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct: 263 gacggttctggacggtgagcttgacggtgacgcggaggcccttccagtccttagccgtct 204
Query: 535 ccttggcgatgtcctcgccgatcttcttcggggagagaccgagcgggccgatcttggggg 594
||||||| |||||||| ||||||||||| |||||||||||||| || |||||||||||||
Sbjct: 203 ccttggcaatgtcctcaccgatcttcttgggggagagaccgaggggaccgatcttggggg 144
Query: 595 ccagcgacgacgccgcgccgacctcgcctcccgtcac 631
| |||||||||||||||||||| |||||||| |||||
Sbjct: 143 cgagcgacgacgccgcgccgacttcgcctccggtcac 107
>gb|BQ459945.1|BQ459945 HA07K12r HA Hordeum vulgare subsp. vulgare cDNA clone HA07K12
5-PRIME, mRNA sequence
Length = 655
Score = 644 bits (325), Expect = 0.0
Identities = 424/457 (92%)
Strand = Plus / Minus
Query: 175 gcctttaagctgaggggatctcgacctcaccatcatcgatctcctgctgcaagtccttgg 234
|||||||||| ||||||||||||||||| || || ||||||||| ||||| ||||||||
Sbjct: 608 gcctttaagcagaggggatctcgacctcgccgtcgtcgatctccgtctgcaggtccttgg 549
Query: 235 ggtccttcccatcgacggtgcacccgacgctgacgcaggtccccaggatctccttgacgg 294
|||||||||| ||||||||||| || |||||||||||||| || ||||||||||||||||
Sbjct: 548 ggtccttcccgtcgacggtgcagccaacgctgacgcaggtgccgaggatctccttgacgg 489
Query: 295 tcccggccaactccttggccatggacctgttccgcatggtcttggcgatctcgatgacgt 354
||||||||| ||||||||||||||||||| || |||| |||||||||||||||||||||
Sbjct: 488 tcccggccatctccttggccatggacctggtcttcatgatcttggcgatctcgatgacgt 429
Query: 355 cgtcgaggctgatgttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgg 414
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 428 cgtcgaggctgatgttgccgttgtgcttgatgttcttgaccttcttcctgtccctctcgg 369
Query: 415 gttccttgagcgccttgatgacgagcgccgcggcggaggggacgacggagaccttggcct 474
| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 gctccttgagggacttgatgacgagcgccgcggcggaggggacgacggagaccttggcct 309
Query: 475 gccggttctgcacggtgagcttgacggtgacgcggaggcccttccagtccttggcggtct 534
| |||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct: 308 gacggttctggacggtgagcttgacggtgacgcggaggcccttccagtccttagccgtct 249
Query: 535 ccttggcgatgtcctcgccgatcttcttcggggagagaccgagcgggccgatcttggggg 594
||||||| |||||||| ||||||||||| |||||||||||||| || |||||||||||||
Sbjct: 248 ccttggcaatgtcctcaccgatcttcttgggggagagaccgaggggaccgatcttggggg 189
Query: 595 ccagcgacgacgccgcgccgacctcgcctcccgtcac 631
| |||||||||||||||||||| |||||||| |||||
Sbjct: 188 cgagcgacgacgccgcgccgacttcgcctccggtcac 152
>gb|BQ470985.1|BQ470985 HX04K02r HX Hordeum vulgare subsp. vulgare cDNA clone HX04K02
5-PRIME, mRNA sequence
Length = 602
Score = 644 bits (325), Expect = 0.0
Identities = 424/457 (92%)
Strand = Plus / Minus
Query: 175 gcctttaagctgaggggatctcgacctcaccatcatcgatctcctgctgcaagtccttgg 234
|||||||||| ||||||||||||||||| || || ||||||||| ||||| ||||||||
Sbjct: 565 gcctttaagcagaggggatctcgacctcgccgtcgtcgatctccgtctgcaggtccttgg 506
Query: 235 ggtccttcccatcgacggtgcacccgacgctgacgcaggtccccaggatctccttgacgg 294
|||||||||| ||||||||||| || |||||||||||||| || ||||||||||||||||
Sbjct: 505 ggtccttcccgtcgacggtgcagccaacgctgacgcaggtgccgaggatctccttgacgg 446
Query: 295 tcccggccaactccttggccatggacctgttccgcatggtcttggcgatctcgatgacgt 354
||||||||| ||||||||||||||||||| || |||| |||||||||||||||||||||
Sbjct: 445 tcccggccatctccttggccatggacctggtcttcatgatcttggcgatctcgatgacgt 386
Query: 355 cgtcgaggctgatgttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgg 414
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cgtcgaggctgatgttgccgttgtgcttgatgttcttgaccttcttcctgtccctctcgg 326
Query: 415 gttccttgagcgccttgatgacgagcgccgcggcggaggggacgacggagaccttggcct 474
| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gctccttgagggacttgatgacgagcgccgcggcggaggggacgacggagaccttggcct 266
Query: 475 gccggttctgcacggtgagcttgacggtgacgcggaggcccttccagtccttggcggtct 534
| |||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct: 265 gacggttctggacggtgagcttgacggtgacgcggaggcccttccagtccttagccgtct 206
Query: 535 ccttggcgatgtcctcgccgatcttcttcggggagagaccgagcgggccgatcttggggg 594
||||||| |||||||| ||||||||||| |||||||||||||| || |||||||||||||
Sbjct: 205 ccttggcaatgtcctcaccgatcttcttgggggagagaccgaggggaccgatcttggggg 146
Query: 595 ccagcgacgacgccgcgccgacctcgcctcccgtcac 631
| |||||||||||||||||||| |||||||| |||||
Sbjct: 145 cgagcgacgacgccgcgccgacttcgcctccggtcac 109
>gb|BU980059.1|BU980059 HA18G17r HA Hordeum vulgare subsp. vulgare cDNA clone HA18G17
5-PRIME, mRNA sequence
Length = 608
Score = 644 bits (325), Expect = 0.0
Identities = 424/457 (92%)
Strand = Plus / Minus
Query: 175 gcctttaagctgaggggatctcgacctcaccatcatcgatctcctgctgcaagtccttgg 234
|||||||||| ||||||||||||||||| || || ||||||||| ||||| ||||||||
Sbjct: 573 gcctttaagcagaggggatctcgacctcgccgtcgtcgatctccgtctgcaggtccttgg 514
Query: 235 ggtccttcccatcgacggtgcacccgacgctgacgcaggtccccaggatctccttgacgg 294
|||||||||| ||||||||||| || |||||||||||||| || ||||||||||||||||
Sbjct: 513 ggtccttcccgtcgacggtgcagccaacgctgacgcaggtgccgaggatctccttgacgg 454
Query: 295 tcccggccaactccttggccatggacctgttccgcatggtcttggcgatctcgatgacgt 354
||||||||| ||||||||||||||||||| || |||| |||||||||||||||||||||
Sbjct: 453 tcccggccatctccttggccatggacctggtcttcatgatcttggcgatctcgatgacgt 394
Query: 355 cgtcgaggctgatgttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgg 414
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 393 cgtcgaggctgatgttgccgttgtgcttgatgttcttgaccttcttcctgtccctctcgg 334
Query: 415 gttccttgagcgccttgatgacgagcgccgcggcggaggggacgacggagaccttggcct 474
| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 gctccttgagggacttgatgacgagcgccgcggcggaggggacgacggagaccttggcct 274
Query: 475 gccggttctgcacggtgagcttgacggtgacgcggaggcccttccagtccttggcggtct 534
| |||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct: 273 gacggttctggacggtgagcttgacggtgacgcggaggcccttccagtccttagccgtct 214
Query: 535 ccttggcgatgtcctcgccgatcttcttcggggagagaccgagcgggccgatcttggggg 594
||||||| |||||||| ||||||||||| |||||||||||||| || |||||||||||||
Sbjct: 213 ccttggcaatgtcctcaccgatcttcttgggggagagaccgaggggaccgatcttggggg 154
Query: 595 ccagcgacgacgccgcgccgacctcgcctcccgtcac 631
| |||||||||||||||||||| |||||||| |||||
Sbjct: 153 cgagcgacgacgccgcgccgacttcgcctccggtcac 117
>gb|BU999623.1|BU999623 HI15C06r HI Hordeum vulgare subsp. vulgare cDNA clone HI15C06
5-PRIME, mRNA sequence
Length = 645
Score = 644 bits (325), Expect = 0.0
Identities = 424/457 (92%)
Strand = Plus / Minus
Query: 175 gcctttaagctgaggggatctcgacctcaccatcatcgatctcctgctgcaagtccttgg 234
|||||||||| ||||||||||||||||| || || ||||||||| ||||| ||||||||
Sbjct: 577 gcctttaagcagaggggatctcgacctcgccgtcgtcgatctccgtctgcaggtccttgg 518
Query: 235 ggtccttcccatcgacggtgcacccgacgctgacgcaggtccccaggatctccttgacgg 294
|||||||||| ||||||||||| || |||||||||||||| || ||||||||||||||||
Sbjct: 517 ggtccttcccgtcgacggtgcagccaacgctgacgcaggtgccgaggatctccttgacgg 458
Query: 295 tcccggccaactccttggccatggacctgttccgcatggtcttggcgatctcgatgacgt 354
||||||||| ||||||||||||||||||| || |||| |||||||||||||||||||||
Sbjct: 457 tcccggccatctccttggccatggacctggtcttcatgatcttggcgatctcgatgacgt 398
Query: 355 cgtcgaggctgatgttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgg 414
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 397 cgtcgaggctgatgttgccgttgtgcttgatgttcttgaccttcttcctgtccctctcgg 338
Query: 415 gttccttgagcgccttgatgacgagcgccgcggcggaggggacgacggagaccttggcct 474
| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 gctccttgagggacttgatgacgagcgccgcggcggaggggacgacggagaccttggcct 278
Query: 475 gccggttctgcacggtgagcttgacggtgacgcggaggcccttccagtccttggcggtct 534
| |||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct: 277 gacggttctggacggtgagcttgacggtgacgcggaggcccttccagtccttagccgtct 218
Query: 535 ccttggcgatgtcctcgccgatcttcttcggggagagaccgagcgggccgatcttggggg 594
||||||| |||||||| ||||||||||| |||||||||||||| || |||||||||||||
Sbjct: 217 ccttggcaatgtcctcaccgatcttcttgggggagagaccgaggggaccgatcttggggg 158
Query: 595 ccagcgacgacgccgcgccgacctcgcctcccgtcac 631
| |||||||||||||||||||| |||||||| |||||
Sbjct: 157 cgagcgacgacgccgcgccgacttcgcctccggtcac 121
>gb|BU999713.1|BU999713 HI15H11r HI Hordeum vulgare subsp. vulgare cDNA clone HI15H11
5-PRIME, mRNA sequence
Length = 645
Score = 644 bits (325), Expect = 0.0
Identities = 424/457 (92%)
Strand = Plus / Minus
Query: 175 gcctttaagctgaggggatctcgacctcaccatcatcgatctcctgctgcaagtccttgg 234
|||||||||| ||||||||||||||||| || || ||||||||| ||||| ||||||||
Sbjct: 577 gcctttaagcagaggggatctcgacctcgccgtcgtcgatctccgtctgcaggtccttgg 518
Query: 235 ggtccttcccatcgacggtgcacccgacgctgacgcaggtccccaggatctccttgacgg 294
|||||||||| ||||||||||| || |||||||||||||| || ||||||||||||||||
Sbjct: 517 ggtccttcccgtcgacggtgcagccaacgctgacgcaggtgccgaggatctccttgacgg 458
Query: 295 tcccggccaactccttggccatggacctgttccgcatggtcttggcgatctcgatgacgt 354
||||||||| ||||||||||||||||||| || |||| |||||||||||||||||||||
Sbjct: 457 tcccggccatctccttggccatggacctggtcttcatgatcttggcgatctcgatgacgt 398
Query: 355 cgtcgaggctgatgttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgg 414
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 397 cgtcgaggctgatgttgccgttgtgcttgatgttcttgaccttcttcctgtccctctcgg 338
Query: 415 gttccttgagcgccttgatgacgagcgccgcggcggaggggacgacggagaccttggcct 474
| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 gctccttgagggacttgatgacgagcgccgcggcggaggggacgacggagaccttggcct 278
Query: 475 gccggttctgcacggtgagcttgacggtgacgcggaggcccttccagtccttggcggtct 534
| |||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct: 277 gacggttctggacggtgagcttgacggtgacgcggaggcccttccagtccttagccgtct 218
Query: 535 ccttggcgatgtcctcgccgatcttcttcggggagagaccgagcgggccgatcttggggg 594
||||||| |||||||| ||||||||||| |||||||||||||| || |||||||||||||
Sbjct: 217 ccttggcaatgtcctcaccgatcttcttgggggagagaccgaggggaccgatcttggggg 158
Query: 595 ccagcgacgacgccgcgccgacctcgcctcccgtcac 631
| |||||||||||||||||||| |||||||| |||||
Sbjct: 157 cgagcgacgacgccgcgccgacttcgcctccggtcac 121
>gb|CA029980.1|CA029980 HX05M02r HX Hordeum vulgare subsp. vulgare cDNA clone HX05M02
5-PRIME, mRNA sequence
Length = 642
Score = 644 bits (325), Expect = 0.0
Identities = 424/457 (92%)
Strand = Plus / Minus
Query: 175 gcctttaagctgaggggatctcgacctcaccatcatcgatctcctgctgcaagtccttgg 234
|||||||||| ||||||||||||||||| || || ||||||||| ||||| ||||||||
Sbjct: 572 gcctttaagcagaggggatctcgacctcgccgtcgtcgatctccgtctgcaggtccttgg 513
Query: 235 ggtccttcccatcgacggtgcacccgacgctgacgcaggtccccaggatctccttgacgg 294
|||||||||| ||||||||||| || |||||||||||||| || ||||||||||||||||
Sbjct: 512 ggtccttcccgtcgacggtgcagccaacgctgacgcaggtgccgaggatctccttgacgg 453
Query: 295 tcccggccaactccttggccatggacctgttccgcatggtcttggcgatctcgatgacgt 354
||||||||| ||||||||||||||||||| || |||| |||||||||||||||||||||
Sbjct: 452 tcccggccatctccttggccatggacctggtcttcatgatcttggcgatctcgatgacgt 393
Query: 355 cgtcgaggctgatgttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgg 414
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 392 cgtcgaggctgatgttgccgttgtgcttgatgttcttgaccttcttcctgtccctctcgg 333
Query: 415 gttccttgagcgccttgatgacgagcgccgcggcggaggggacgacggagaccttggcct 474
| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 gctccttgagggacttgatgacgagcgccgcggcggaggggacgacggagaccttggcct 273
Query: 475 gccggttctgcacggtgagcttgacggtgacgcggaggcccttccagtccttggcggtct 534
| |||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct: 272 gacggttctggacggtgagcttgacggtgacgcggaggcccttccagtccttagccgtct 213
Query: 535 ccttggcgatgtcctcgccgatcttcttcggggagagaccgagcgggccgatcttggggg 594
||||||| |||||||| ||||||||||| |||||||||||||| || |||||||||||||
Sbjct: 212 ccttggcaatgtcctcaccgatcttcttgggggagagaccgaggggaccgatcttggggg 153
Query: 595 ccagcgacgacgccgcgccgacctcgcctcccgtcac 631
| |||||||||||||||||||| |||||||| |||||
Sbjct: 152 cgagcgacgacgccgcgccgacttcgcctccggtcac 116
>gb|CK122992.1|CK122992 BES1824101k24 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010K241 5-PRIME, mRNA sequence
Length = 755
Score = 644 bits (325), Expect = 0.0
Identities = 424/457 (92%)
Strand = Plus / Minus
Query: 175 gcctttaagctgaggggatctcgacctcaccatcatcgatctcctgctgcaagtccttgg 234
|||||||||| ||||||||||||||||| || || ||||||||| ||||| ||||||||
Sbjct: 565 gcctttaagcagaggggatctcgacctcgccgtcgtcgatctccgtctgcaggtccttgg 506
Query: 235 ggtccttcccatcgacggtgcacccgacgctgacgcaggtccccaggatctccttgacgg 294
|||||||||| ||||||||||| || |||||||||||||| || ||||||||||||||||
Sbjct: 505 ggtccttcccgtcgacggtgcagccaacgctgacgcaggtgccgaggatctccttgacgg 446
Query: 295 tcccggccaactccttggccatggacctgttccgcatggtcttggcgatctcgatgacgt 354
||||||||| ||||||||||||||||||| || |||| |||||||||||||||||||||
Sbjct: 445 tcccggccatctccttggccatggacctggtcttcatgatcttggcgatctcgatgacgt 386
Query: 355 cgtcgaggctgatgttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgg 414
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cgtcgaggctgatgttgccgttgtgcttgatgttcttgaccttcttcctgtccctctcgg 326
Query: 415 gttccttgagcgccttgatgacgagcgccgcggcggaggggacgacggagaccttggcct 474
| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gctccttgagggacttgatgacgagcgccgcggcggaggggacgacggagaccttggcct 266
Query: 475 gccggttctgcacggtgagcttgacggtgacgcggaggcccttccagtccttggcggtct 534
| |||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct: 265 gacggttctggacggtgagcttgacggtgacgcggaggcccttccagtccttagccgtct 206
Query: 535 ccttggcgatgtcctcgccgatcttcttcggggagagaccgagcgggccgatcttggggg 594
||||||| |||||||| ||||||||||| |||||||||||||| || |||||||||||||
Sbjct: 205 ccttggcaatgtcctcaccgatcttcttgggggagagaccgaggggaccgatcttggggg 146
Query: 595 ccagcgacgacgccgcgccgacctcgcctcccgtcac 631
| |||||||||||||||||||| |||||||| |||||
Sbjct: 145 cgagcgacgacgccgcgccgacttcgcctccggtcac 109
>gb|CK123200.1|CK123200 BES1824102h12 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010H122 5-PRIME, mRNA sequence
Length = 748
Score = 644 bits (325), Expect = 0.0
Identities = 424/457 (92%)
Strand = Plus / Minus
Query: 175 gcctttaagctgaggggatctcgacctcaccatcatcgatctcctgctgcaagtccttgg 234
|||||||||| ||||||||||||||||| || || ||||||||| ||||| ||||||||
Sbjct: 562 gcctttaagcagaggggatctcgacctcgccgtcgtcgatctccgtctgcaggtccttgg 503
Query: 235 ggtccttcccatcgacggtgcacccgacgctgacgcaggtccccaggatctccttgacgg 294
|||||||||| ||||||||||| || |||||||||||||| || ||||||||||||||||
Sbjct: 502 ggtccttcccgtcgacggtgcagccaacgctgacgcaggtgccgaggatctccttgacgg 443
Query: 295 tcccggccaactccttggccatggacctgttccgcatggtcttggcgatctcgatgacgt 354
||||||||| ||||||||||||||||||| || |||| |||||||||||||||||||||
Sbjct: 442 tcccggccatctccttggccatggacctggtcttcatgatcttggcgatctcgatgacgt 383
Query: 355 cgtcgaggctgatgttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgg 414
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 382 cgtcgaggctgatgttgccgttgtgcttgatgttcttgaccttcttcctgtccctctcgg 323
Query: 415 gttccttgagcgccttgatgacgagcgccgcggcggaggggacgacggagaccttggcct 474
| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 gctccttgagggacttgatgacgagcgccgcggcggaggggacgacggagaccttggcct 263
Query: 475 gccggttctgcacggtgagcttgacggtgacgcggaggcccttccagtccttggcggtct 534
| |||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct: 262 gacggttctggacggtgagcttgacggtgacgcggaggcccttccagtccttagccgtct 203
Query: 535 ccttggcgatgtcctcgccgatcttcttcggggagagaccgagcgggccgatcttggggg 594
||||||| |||||||| ||||||||||| |||||||||||||| || |||||||||||||
Sbjct: 202 ccttggcaatgtcctcaccgatcttcttgggggagagaccgaggggaccgatcttggggg 143
Query: 595 ccagcgacgacgccgcgccgacctcgcctcccgtcac 631
| |||||||||||||||||||| |||||||| |||||
Sbjct: 142 cgagcgacgacgccgcgccgacttcgcctccggtcac 106
>gb|CK122355.1|CK122355 BES1824102p21 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010P212 5-PRIME, mRNA sequence
Length = 702
Score = 642 bits (324), Expect = 0.0
Identities = 423/456 (92%)
Strand = Plus / Minus
Query: 176 cctttaagctgaggggatctcgacctcaccatcatcgatctcctgctgcaagtccttggg 235
||||||||| ||||||||||||||||| || || ||||||||| ||||| |||||||||
Sbjct: 566 cctttaagcagaggggatctcgacctcgccgtcgtcgatctccgtctgcaggtccttggg 507
Query: 236 gtccttcccatcgacggtgcacccgacgctgacgcaggtccccaggatctccttgacggt 295
||||||||| ||||||||||| || |||||||||||||| || |||||||||||||||||
Sbjct: 506 gtccttcccgtcgacggtgcagccaacgctgacgcaggtgccgaggatctccttgacggt 447
Query: 296 cccggccaactccttggccatggacctgttccgcatggtcttggcgatctcgatgacgtc 355
|||||||| ||||||||||||||||||| || |||| ||||||||||||||||||||||
Sbjct: 446 cccggccatctccttggccatggacctggtcttcatgatcttggcgatctcgatgacgtc 387
Query: 356 gtcgaggctgatgttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcggg 415
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 gtcgaggctgatgttgccgttgtgcttgatgttcttgaccttcttcctgtccctctcggg 327
Query: 416 ttccttgagcgccttgatgacgagcgccgcggcggaggggacgacggagaccttggcctg 475
|||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 ctccttgagggacttgatgacgagcgccgcggcggaggggacgacggagaccttggcctg 267
Query: 476 ccggttctgcacggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctc 535
|||||||| ||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct: 266 acggttctggacggtgagcttgacggtgacgcggaggcccttccagtccttagccgtctc 207
Query: 536 cttggcgatgtcctcgccgatcttcttcggggagagaccgagcgggccgatcttgggggc 595
|||||| |||||||| ||||||||||| |||||||||||||| || ||||||||||||||
Sbjct: 206 cttggcaatgtcctcaccgatcttcttgggggagagaccgaggggaccgatcttgggggc 147
Query: 596 cagcgacgacgccgcgccgacctcgcctcccgtcac 631
|||||||||||||||||||| |||||||| |||||
Sbjct: 146 gagcgacgacgccgcgccgacttcgcctccggtcac 111
>gb|BF257334.2|BF257334 HVSMEf0012J10f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0012J10f, mRNA sequence
Length = 539
Score = 640 bits (323), Expect = 0.0
Identities = 419/451 (92%)
Strand = Plus / Minus
Query: 175 gcctttaagctgaggggatctcgacctcaccatcatcgatctcctgctgcaagtccttgg 234
|||||||||| ||||||||||||||||| || || ||||||||| ||||| ||||||||
Sbjct: 452 gcctttaagcagaggggatctcgacctcgccgtcgtcgatctccgtctgcaggtccttgg 393
Query: 235 ggtccttcccatcgacggtgcacccgacgctgacgcaggtccccaggatctccttgacgg 294
|||||||||| ||||||||||| || |||||||||||||| || ||||||||||||||||
Sbjct: 392 ggtccttcccgtcgacggtgcagccaacgctgacgcaggtgccgaggatctccttgacgg 333
Query: 295 tcccggccaactccttggccatggacctgttccgcatggtcttggcgatctcgatgacgt 354
||||||||| ||||||||||||||||||| || |||| |||||||||||||||||||||
Sbjct: 332 tcccggccatctccttggccatggacctggtcttcatgatcttggcgatctcgatgacgt 273
Query: 355 cgtcgaggctgatgttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgg 414
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 272 cgtcgaggctgatgttgccgttgtgcttgatgttcttgaccttcttcctgtccctctcgg 213
Query: 415 gttccttgagcgccttgatgacgagcgccgcggcggaggggacgacggagaccttggcct 474
| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 gctccttgagggacttgatgacgagcgccgcggcggaggggacgacggagaccttggcct 153
Query: 475 gccggttctgcacggtgagcttgacggtgacgcggaggcccttccagtccttggcggtct 534
| |||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct: 152 gacggttctggacggtgagcttgacggtgacgcggaggcccttccagtccttagccgtct 93
Query: 535 ccttggcgatgtcctcgccgatcttcttcggggagagaccgagcgggccgatcttggggg 594
||||||| |||||||| ||||||||||| |||||||||||||| || |||||||||||||
Sbjct: 92 ccttggcaatgtcctcaccgatcttcttgggggagagaccgaggggaccgatcttggggg 33
Query: 595 ccagcgacgacgccgcgccgacctcgcctcc 625
| |||||||||||||||||||| ||||||||
Sbjct: 32 cgagcgacgacgccgcgccgacttcgcctcc 2
>gb|BM098049.2|BM098049 EBpi03_SQ002_G11_R pistil, 4 DPA, no treatment, cv Optic, EBpi03
Hordeum vulgare subsp. vulgare cDNA clone
EBpi03_SQ002_G11 5', mRNA sequence
Length = 557
Score = 632 bits (319), Expect = e-180
Identities = 418/451 (92%)
Strand = Plus / Minus
Query: 181 aagctgaggggatctcgacctcaccatcatcgatctcctgctgcaagtccttggggtcct 240
|||| ||||||||||||||||| || || ||||||||| ||||| ||||||||||||||
Sbjct: 557 aagcagaggggatctcgacctcgccgtcgtcgatctccgtctgcaggtccttggggtcct 498
Query: 241 tcccatcgacggtgcacccgacgctgacgcaggtccccaggatctccttgacggtcccgg 300
|||| ||||||||||| || |||||||||||||| || ||||||||||||||||||||||
Sbjct: 497 tcccgtcgacggtgcagccaacgctgacgcaggtgccgaggatctccttgacggtcccgg 438
Query: 301 ccaactccttggccatggacctgttccgcatggtcttggcgatctcgatgacgtcgtcga 360
||| ||||||||||||||||||| || |||| |||||||||||||||||||||||||||
Sbjct: 437 ccatctccttggccatggacctggtcttcatgatcttggcgatctcgatgacgtcgtcga 378
Query: 361 ggctgatgttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttcct 420
|||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 377 ggctgatgttgccgttgtgcttgatgttcttgaccttcttcctgtccctctcgggctcct 318
Query: 421 tgagcgccttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggt 480
|||| | |||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 317 tgagggacttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgacggt 258
Query: 481 tctgcacggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttgg 540
|||| ||||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 257 tctggacggtgagcttgacggtgacgcggaggcccttccagtccttagccgtctccttgg 198
Query: 541 cgatgtcctcgccgatcttcttcggggagagaccgagcgggccgatcttgggggccagcg 600
| |||||||| ||||||||||| |||||||||||||| || |||||||||||||| ||||
Sbjct: 197 caatgtcctcaccgatcttcttgggggagagaccgaggggaccgatcttgggggcgagcg 138
Query: 601 acgacgccgcgccgacctcgcctcccgtcac 631
|||||||||||||||| |||||||| |||||
Sbjct: 137 acgacgccgcgccgacttcgcctccggtcac 107
>gb|BI953596.1|BI953596 HVSMEm0013I04f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0013I04f, mRNA sequence
Length = 845
Score = 628 bits (317), Expect = e-179
Identities = 422/457 (92%)
Strand = Plus / Minus
Query: 175 gcctttaagctgaggggatctcgacctcaccatcatcgatctcctgctgcaagtccttgg 234
|||||||||| ||||||||||||||||| | || ||||||||| ||||| ||| ||||
Sbjct: 574 gcctttaagcagaggggatctcgacctcgcagtcgtcgatctccgtctgcaggtctttgg 515
Query: 235 ggtccttcccatcgacggtgcacccgacgctgacgcaggtccccaggatctccttgacgg 294
|||||||||| ||||||||||| || |||||||||||||| || ||||||||||||||||
Sbjct: 514 ggtccttcccgtcgacggtgcagccaacgctgacgcaggtgccgaggatctccttgacgg 455
Query: 295 tcccggccaactccttggccatggacctgttccgcatggtcttggcgatctcgatgacgt 354
||||||||| ||||||||||||||||||| || |||| |||||||||||||||||||||
Sbjct: 454 tcccggccatctccttggccatggacctggtcttcatgatcttggcgatctcgatgacgt 395
Query: 355 cgtcgaggctgatgttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgg 414
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 394 cgtcgaggctgatgttgccgttgtgcttgatgttcttgaccttcttcctgtccctctcgg 335
Query: 415 gttccttgagcgccttgatgacgagcgccgcggcggaggggacgacggagaccttggcct 474
| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 gctccttgagggacttgatgacgagcgccgcggcggaggggacgacggagaccttggcct 275
Query: 475 gccggttctgcacggtgagcttgacggtgacgcggaggcccttccagtccttggcggtct 534
| |||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct: 274 gacggttctggacggtgagcttgacggtgacgcggaggcccttccagtccttagccgtct 215
Query: 535 ccttggcgatgtcctcgccgatcttcttcggggagagaccgagcgggccgatcttggggg 594
||||||| |||||||| ||||||||||| |||||||||||||| || |||||||||||||
Sbjct: 214 ccttggcaatgtcctcaccgatcttcttgggggagagaccgaggggaccgatcttggggg 155
Query: 595 ccagcgacgacgccgcgccgacctcgcctcccgtcac 631
| |||||||||||||||||||| |||||||| |||||
Sbjct: 154 cgagcgacgacgccgcgccgacttcgcctccggtcac 118
>gb|BG367786.2|BG367786 HVSMEi0013K16f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0013K16f, mRNA sequence
Length = 550
Score = 622 bits (314), Expect = e-177
Identities = 410/442 (92%)
Strand = Plus / Minus
Query: 190 ggatctcgacctcaccatcatcgatctcctgctgcaagtccttggggtccttcccatcga 249
||||||||||||| || || ||||||||| ||||| |||||||||||||||||| ||||
Sbjct: 549 ggatctcgacctcgccgtcgtcgatctccgtctgcaggtccttggggtccttcccgtcga 490
Query: 250 cggtgcacccgacgctgacgcaggtccccaggatctccttgacggtcccggccaactcct 309
||||||| || |||||||||||||| || ||||||||||||||||||||||||| |||||
Sbjct: 489 cggtgcagccaacgctgacgcaggtgccgaggatctccttgacggtcccggccatctcct 430
Query: 310 tggccatggacctgttccgcatggtcttggcgatctcgatgacgtcgtcgaggctgatgt 369
|||||||||||||| || |||| ||||||||||||||||||||||||||||||||||||
Sbjct: 429 tggccatggacctggtcttcatgatcttggcgatctcgatgacgtcgtcgaggctgatgt 370
Query: 370 tgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgcct 429
||||| |||||||||||||||||||||||||||||||||||||||| |||||||| | ||
Sbjct: 369 tgccgttgtgcttgatgttcttgaccttcttcctgtccctctcgggctccttgagggact 310
Query: 430 tgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctgcacgg 489
|||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 309 tgatgacgagcgccgcggcggaggggacgacggagaccttggcctgacggttctggacgg 250
Query: 490 tgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcct 549
||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||||
Sbjct: 249 tgagcttgacggtgacgcggaggcccttccagtccttagccgtctccttggcaatgtcct 190
Query: 550 cgccgatcttcttcggggagagaccgagcgggccgatcttgggggccagcgacgacgccg 609
| ||||||||||| |||||||||||||| || |||||||||||||| |||||||||||||
Sbjct: 189 caccgatcttcttgggggagagaccgaggggaccgatcttgggggcgagcgacgacgccg 130
Query: 610 cgccgacctcgcctcccgtcac 631
||||||| |||||||| |||||
Sbjct: 129 cgccgacttcgcctccggtcac 108
>gb|BE195706.2|BE195706 HVSMEh0090D15f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0090D15f, mRNA sequence
Length = 632
Score = 618 bits (312), Expect = e-176
Identities = 417/452 (92%)
Strand = Plus / Minus
Query: 180 taagctgaggggatctcgacctcaccatcatcgatctcctgctgcaagtccttggggtcc 239
||||| |||||||||||||| || || || ||||||||| ||||| ||| |||||||||
Sbjct: 567 taagcagaggggatctcgacttcgccgtcgtcgatctccgtctgcaggtctttggggtcc 508
Query: 240 ttcccatcgacggtgcacccgacgctgacgcaggtccccaggatctccttgacggtcccg 299
||||| ||||||||||| || |||||||||||||| || |||||||||||||||||||||
Sbjct: 507 ttcccgtcgacggtgcagccaacgctgacgcaggtgccgaggatctccttgacggtcccg 448
Query: 300 gccaactccttggccatggacctgttccgcatggtcttggcgatctcgatgacgtcgtcg 359
|||| ||||||||||||||||||| || |||| ||||||||||||||||||||||||||
Sbjct: 447 gccatctccttggccatggacctggtcttcatgatcttggcgatctcgatgacgtcgtcg 388
Query: 360 aggctgatgttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttcc 419
||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 387 aggctgatgttgccgttgtgcttgatgttcttgaccttcttcctgtccctctcgggctcc 328
Query: 420 ttgagcgccttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccgg 479
||||| | |||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 327 ttgagggacttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgacgg 268
Query: 480 ttctgcacggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttg 539
||||| ||||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct: 267 ttctggacggtgagcttgacggtgacgcggaggcccttccagtccttagccgtctccttg 208
Query: 540 gcgatgtcctcgccgatcttcttcggggagagaccgagcgggccgatcttgggggccagc 599
|| |||||||| ||||||||||| |||||||||||||| || |||||||||||||| |||
Sbjct: 207 gcaatgtcctcaccgatcttcttgggggagagaccgaggggaccgatcttgggggcgagc 148
Query: 600 gacgacgccgcgccgacctcgcctcccgtcac 631
||||||||||||||||| |||||||| |||||
Sbjct: 147 gacgacgccgcgccgacttcgcctccggtcac 116
>gb|CK122756.1|CK122756 BES1824105k19 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010K195 5-PRIME, mRNA sequence
Length = 680
Score = 615 bits (310), Expect = e-175
Identities = 412/445 (92%), Gaps = 1/445 (0%)
Strand = Plus / Minus
Query: 188 ggggatctcgacctcacca-tcatcgatctcctgctgcaagtccttggggtccttcccat 246
||||||||||||||| || || ||||||||| ||||| |||||||||||||||||| |
Sbjct: 561 ggggatctcgacctcncccgtcgtcgatctccgtctgcaggtccttggggtccttcccgt 502
Query: 247 cgacggtgcacccgacgctgacgcaggtccccaggatctccttgacggtcccggccaact 306
|||||||||| || |||||||||||||| || ||||||||||||||||||||||||| ||
Sbjct: 501 cgacggtgcagccaacgctgacgcaggtgccgaggatctccttgacggtcccggccatct 442
Query: 307 ccttggccatggacctgttccgcatggtcttggcgatctcgatgacgtcgtcgaggctga 366
||||||||||||||||| || |||| |||||||||||||||||||||||||||||||||
Sbjct: 441 ccttggccatggacctggtcttcatgatcttggcgatctcgatgacgtcgtcgaggctga 382
Query: 367 tgttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcg 426
|||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct: 381 tgttgccgttgtgcttgatgttcttgaccttcttcctgtccctctcgggctccttgaggg 322
Query: 427 ccttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctgca 486
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct: 321 acttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgacggttctgga 262
Query: 487 cggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgt 546
|||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||
Sbjct: 261 cggtgagcttgacggtgacgcggaggcccttccagtccttagccgtctccttggcaatgt 202
Query: 547 cctcgccgatcttcttcggggagagaccgagcgggccgatcttgggggccagcgacgacg 606
|||| ||||||||||| |||||||||||||| || |||||||||||||| ||||||||||
Sbjct: 201 cctcaccgatcttcttgggggagagaccgaggggaccgatcttgggggcgagcgacgacg 142
Query: 607 ccgcgccgacctcgcctcccgtcac 631
|||||||||| |||||||| |||||
Sbjct: 141 ccgcgccgacttcgcctccggtcac 117
>gb|CA022949.1|CA022949 HZ44N01r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ44N01
5-PRIME, mRNA sequence
Length = 557
Score = 613 bits (309), Expect = e-174
Identities = 408/441 (92%)
Strand = Plus / Minus
Query: 191 gatctcgacctcaccatcatcgatctcctgctgcaagtccttggggtccttcccatcgac 250
|||||||||||| || || ||||||||| ||||| |||||||||||||||||| |||||
Sbjct: 557 gatctcgacctcgccgtcgtcgatctccgtctgcaggtccttggggtccttcccgtcgac 498
Query: 251 ggtgcacccgacgctgacgcaggtccccaggatctccttgacggtcccggccaactcctt 310
|||||| || |||||||||||||| || ||||||||||||||||||||||||| ||||||
Sbjct: 497 ggtgcagccaacgctgacgcaggtgccgaggatctccttgacggtcccggccatctcctt 438
Query: 311 ggccatggacctgttccgcatggtcttggcgatctcgatgacgtcgtcgaggctgatgtt 370
||||||||||||| || |||| |||||||||||||||||||||||||||||||||||||
Sbjct: 437 ggccatggacctggtcttcatgatcttggcgatctcgatgacgtcgtcgaggctgatgtt 378
Query: 371 gccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgcctt 430
|||| ||||||||||||||||||| |||||||||||||||||||| |||||||| | |||
Sbjct: 377 gccgttgtgcttgatgttcttgactttcttcctgtccctctcgggctccttgagggactt 318
Query: 431 gatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctgcacggt 490
||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 317 gatgacgagcgccgcggcggaggggacgacggagaccttggcctgacggttctggacggt 258
Query: 491 gagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcctc 550
|||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||
Sbjct: 257 gagcttgacggtgacgcggaggcccttccagtccttagccgtctccttggcaatgtcctc 198
Query: 551 gccgatcttcttcggggagagaccgagcgggccgatcttgggggccagcgacgacgccgc 610
||||||||||| |||||||||||||| || |||||||||||||| ||||||||||||||
Sbjct: 197 accgatcttcttgggggagagaccgaggggaccgatcttgggggcgagcgacgacgccgc 138
Query: 611 gccgacctcgcctcccgtcac 631
|||||| |||||||| |||||
Sbjct: 137 gccgacttcgcctccggtcac 117
>gb|BQ759877.1|BQ759877 EBpi05_SQ004_O13_R pistil, 8 DPA, no treatment, cv Optic, EBpi05
Hordeum vulgare subsp. vulgare cDNA clone
EBpi05_SQ004_O13 5', mRNA sequence
Length = 517
Score = 607 bits (306), Expect = e-172
Identities = 415/449 (92%), Gaps = 2/449 (0%)
Strand = Plus / Minus
Query: 175 gcctttaagctgaggggatctcgacctcacca-tcatcgatctcctgctgcaagtccttg 233
|||||||||| |||||||||||||| || || || ||||||||| ||||| |||||||
Sbjct: 448 gcctttaagcagaggggatctcgac-tcgccngtcgtcgatctccgtctgcaggtccttg 390
Query: 234 gggtccttcccatcgacggtgcacccgacgctgacgcaggtccccaggatctccttgacg 293
||||||||||| ||||||||||| || |||||||||||||| || |||||||||||||||
Sbjct: 389 gggtccttcccgtcgacggtgcagccaacgctgacgcaggtgccgaggatctccttgacg 330
Query: 294 gtcccggccaactccttggccatggacctgttccgcatggtcttggcgatctcgatgacg 353
|||||||||| ||||||||||||||||||| || |||| ||||||||||||||||||||
Sbjct: 329 gtcccggccatctccttggccatggacctggtcttcatgatcttggcgatctcgatgacg 270
Query: 354 tcgtcgaggctgatgttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcg 413
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 269 tcgtcgaggctgatgttgccgttgtgcttgatgttcttgaccttcttcctgtccctctcg 210
Query: 414 ggttccttgagcgccttgatgacgagcgccgcggcggaggggacgacggagaccttggcc 473
|| |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 ggctccttgagggacttgatgacgagcgccgcggcggaggggacgacggagaccttggcc 150
Query: 474 tgccggttctgcacggtgagcttgacggtgacgcggaggcccttccagtccttggcggtc 533
|| |||||||| ||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 149 tgacggttctggacggtgagcttgacggtgacgcggaggcccttccagtccttagccgtc 90
Query: 534 tccttggcgatgtcctcgccgatcttcttcggggagagaccgagcgggccgatcttgggg 593
|||||||| |||||||| ||||||||||| |||||||||||||| || ||||||||||||
Sbjct: 89 tccttggcaatgtcctcaccgatcttcttgggggagagaccgaggggaccgatcttgggg 30
Query: 594 gccagcgacgacgccgcgccgacctcgcc 622
|| |||||||||||||||||||| |||||
Sbjct: 29 gcgagcgacgacgccgcgccgacttcgcc 1
>gb|CK122185.1|CK122185 BES1824101p07 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010P071 5-PRIME, mRNA sequence
Length = 667
Score = 605 bits (305), Expect = e-172
Identities = 422/459 (91%), Gaps = 3/459 (0%)
Strand = Plus / Minus
Query: 176 cctttaagctgaggggatctcgacc--tcaccatcatcgatctcctgctgcaagtccttg 233
|||| |||| ||||||||||||||| || || || ||||||||| ||||| |||||||
Sbjct: 590 ccttnaagcagaggggatctcgacccttcgccgtcgtcgatctccgtctgcaggtccttg 531
Query: 234 gggtcctt-cccatcgacggtgcacccgacgctgacgcaggtccccaggatctccttgac 292
|||||||| ||| ||||||||||| || |||||||||||||| || ||||||||||||||
Sbjct: 530 gggtccttncccgtcgacggtgcagccaacgctgacgcaggtgccgaggatctccttgac 471
Query: 293 ggtcccggccaactccttggccatggacctgttccgcatggtcttggcgatctcgatgac 352
||||||||||| ||||||||||||||||||| || |||| |||||||||||||||||||
Sbjct: 470 ggtcccggccatctccttggccatggacctggtcttcatgatcttggcgatctcgatgac 411
Query: 353 gtcgtcgaggctgatgttgccgctgtgcttgatgttcttgaccttcttcctgtccctctc 412
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 410 gtcgtcgaggctgatgttgccgttgtgcttgatgttcttgaccttcttcctgtccctctc 351
Query: 413 gggttccttgagcgccttgatgacgagcgccgcggcggaggggacgacggagaccttggc 472
||| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 gggctccttgagggacttgatgacgagcgccgcggcggaggggacgacggagaccttggc 291
Query: 473 ctgccggttctgcacggtgagcttgacggtgacgcggaggcccttccagtccttggcggt 532
||| |||||||| ||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 290 ctgacggttctggacggtgagcttgacggtgacgcggaggcccttccagtccttagccgt 231
Query: 533 ctccttggcgatgtcctcgccgatcttcttcggggagagaccgagcgggccgatcttggg 592
||||||||| |||||||| ||||||||||| |||||||||||||| || |||||||||||
Sbjct: 230 ctccttggcaatgtcctcaccgatcttcttgggggagagaccgaggggaccgatcttggg 171
Query: 593 ggccagcgacgacgccgcgccgacctcgcctcccgtcac 631
||| |||||||||||||||||||| |||||||| |||||
Sbjct: 170 ggcgagcgacgacgccgcgccgacttcgcctccggtcac 132
>gb|BM098109.2|BM098109 EBpi03_SQ002_J07_R pistil, 4 DPA, no treatment, cv Optic, EBpi03
Hordeum vulgare subsp. vulgare cDNA clone
EBpi03_SQ002_J07 5', mRNA sequence
Length = 505
Score = 601 bits (303), Expect = e-170
Identities = 384/411 (93%)
Strand = Plus / Minus
Query: 221 ctgcaagtccttggggtccttcccatcgacggtgcacccgacgctgacgcaggtccccag 280
||||| |||||||||||||||||| ||||||||||| || |||||||||||||| || ||
Sbjct: 498 ctgcaggtccttggggtccttcccgtcgacggtgcagccaacgctgacgcaggtgccgag 439
Query: 281 gatctccttgacggtcccggccaactccttggccatggacctgttccgcatggtcttggc 340
||||||||||||||||||||||| ||||||||||||||||||| || |||| |||||||
Sbjct: 438 gatctccttgacggtcccggccatctccttggccatggacctggtcttcatgatcttggc 379
Query: 341 gatctcgatgacgtcgtcgaggctgatgttgccgctgtgcttgatgttcttgaccttctt 400
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 378 gatctcgatgacgtcgtcgaggctgatgttgccgttgtgcttgatgttcttgaccttctt 319
Query: 401 cctgtccctctcgggttccttgagcgccttgatgacgagcgccgcggcggaggggacgac 460
||||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 318 cctgtccctctcgggctccttgagggacttgatgacgagcgccgcggcggaggggacgac 259
Query: 461 ggagaccttggcctgccggttctgcacggtgagcttgacggtgacgcggaggcccttcca 520
||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 258 ggagaccttggcctgacggttctggacggtgagcttgacggtgacgcggaggcccttcca 199
Query: 521 gtccttggcggtctccttggcgatgtcctcgccgatcttcttcggggagagaccgagcgg 580
|||||| || ||||||||||| |||||||| ||||||||||| |||||||||||||| ||
Sbjct: 198 gtccttagccgtctccttggcaatgtcctcaccgatcttcttgggggagagaccgagggg 139
Query: 581 gccgatcttgggggccagcgacgacgccgcgccgacctcgcctcccgtcac 631
|||||||||||||| |||||||||||||||||||| |||||||| |||||
Sbjct: 138 accgatcttgggggcgagcgacgacgccgcgccgacttcgcctccggtcac 88
>gb|BM100041.2|BM100041 EBes01_SQ004_P21_R embryo sac, 4-6 DPA, no treatment, cv Optic,
EBes01 Hordeum vulgare subsp. vulgare cDNA clone
EBes01_SQ004_P21 5', mRNA sequence
Length = 515
Score = 597 bits (301), Expect = e-169
Identities = 379/405 (93%)
Strand = Plus / Minus
Query: 227 gtccttggggtccttcccatcgacggtgcacccgacgctgacgcaggtccccaggatctc 286
|||||||||||||||||| ||||||||||| || |||||||||||||| || ||||||||
Sbjct: 511 gtccttggggtccttcccgtcgacggtgcagccaacgctgacgcaggtgccgaggatctc 452
Query: 287 cttgacggtcccggccaactccttggccatggacctgttccgcatggtcttggcgatctc 346
||||||||||||||||| ||||||||||||||||||| || |||| |||||||||||||
Sbjct: 451 cttgacggtcccggccatctccttggccatggacctggtcttcatgatcttggcgatctc 392
Query: 347 gatgacgtcgtcgaggctgatgttgccgctgtgcttgatgttcttgaccttcttcctgtc 406
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 391 gatgacgtcgtcgaggctgatgttgccgttgtgcttgatgttcttgaccttcttcctgtc 332
Query: 407 cctctcgggttccttgagcgccttgatgacgagcgccgcggcggaggggacgacggagac 466
||||||||| |||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 331 cctctcgggctccttgagggacttgatgacgagcgccgcggcggaggggacgacggagac 272
Query: 467 cttggcctgccggttctgcacggtgagcttgacggtgacgcggaggcccttccagtcctt 526
||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 cttggcctgacggttctggacggtgagcttgacggtgacgcggaggcccttccagtcctt 212
Query: 527 ggcggtctccttggcgatgtcctcgccgatcttcttcggggagagaccgagcgggccgat 586
|| ||||||||||| |||||||| ||||||||||| |||||||||||||| || |||||
Sbjct: 211 agccgtctccttggcaatgtcctcaccgatcttcttgggggagagaccgaggggaccgat 152
Query: 587 cttgggggccagcgacgacgccgcgccgacctcgcctcccgtcac 631
||||||||| |||||||||||||||||||| |||||||| |||||
Sbjct: 151 cttgggggcgagcgacgacgccgcgccgacttcgcctccggtcac 107
>gb|BF628424.2|BF628424 HVSMEb0003P23f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0003P23f, mRNA sequence
Length = 522
Score = 593 bits (299), Expect = e-168
Identities = 383/411 (93%)
Strand = Plus / Minus
Query: 221 ctgcaagtccttggggtccttcccatcgacggtgcacccgacgctgacgcaggtccccag 280
||||| |||||||||||||||||| ||||||||||| || |||||||||||||| || ||
Sbjct: 519 ctgcaggtccttggggtccttcccgtcgacggtgcagccaacgctgacgcaggtgccgag 460
Query: 281 gatctccttgacggtcccggccaactccttggccatggacctgttccgcatggtcttggc 340
||||||||||||||||||||||| ||||||||||||||||||| || |||| |||||||
Sbjct: 459 gatctccttgacggtcccggccatctccttggccatggacctggtcttcatgatcttggc 400
Query: 341 gatctcgatgacgtcgtcgaggctgatgttgccgctgtgcttgatgttcttgaccttctt 400
|||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 399 gatctcgatgacgtcgtcgaggctgatgttgccgttgtgcttgatgttcttgaccatctt 340
Query: 401 cctgtccctctcgggttccttgagcgccttgatgacgagcgccgcggcggaggggacgac 460
||||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 339 cctgtccctctcgggctccttgagggacttgatgacgagcgccgcggcggaggggacgac 280
Query: 461 ggagaccttggcctgccggttctgcacggtgagcttgacggtgacgcggaggcccttcca 520
||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 279 ggagaccttggcctgacggttctggacggtgagcttgacggtgacgcggaggcccttcca 220
Query: 521 gtccttggcggtctccttggcgatgtcctcgccgatcttcttcggggagagaccgagcgg 580
|||||| || ||||||||||| |||||||| ||||||||||| |||||||||||||| ||
Sbjct: 219 gtccttagccgtctccttggcaatgtcctcaccgatcttcttgggggagagaccgagggg 160
Query: 581 gccgatcttgggggccagcgacgacgccgcgccgacctcgcctcccgtcac 631
|||||||||||||| |||||||||||||||||||| |||||||| |||||
Sbjct: 159 accgatcttgggggcgagcgacgacgccgcgccgacttcgcctccggtcac 109
>gb|AV920279.1|AV920279 AV920279 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags13b12 3', mRNA sequence
Length = 589
Score = 593 bits (299), Expect = e-168
Identities = 377/403 (93%)
Strand = Plus / Plus
Query: 175 gcctttaagctgaggggatctcgacctcaccatcatcgatctcctgctgcaagtccttgg 234
|||||||||| ||||||||||||||||| || || ||||||||| ||||| ||||||||
Sbjct: 179 gcctttaagcagaggggatctcgacctcgccgtcgtcgatctccgtctgcaggtccttgg 238
Query: 235 ggtccttcccatcgacggtgcacccgacgctgacgcaggtccccaggatctccttgacgg 294
|||||||||| ||||||||||| || |||||||||||||| || ||||||||||||||||
Sbjct: 239 ggtccttcccgtcgacggtgcagccaacgctgacgcaggtgccgaggatctccttgacgg 298
Query: 295 tcccggccaactccttggccatggacctgttccgcatggtcttggcgatctcgatgacgt 354
||||||||| ||||||||||||||||||| || |||| |||||||||||||||||||||
Sbjct: 299 tcccggccatctccttggccatggacctggtcttcatgatcttggcgatctcgatgacgt 358
Query: 355 cgtcgaggctgatgttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgg 414
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 359 cgtcgaggctgatgttgccgttgtgcttgatgttcttgaccttcttcctgtccctctcgg 418
Query: 415 gttccttgagcgccttgatgacgagcgccgcggcggaggggacgacggagaccttggcct 474
| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 gctccttgagggacttgatgacgagcgccgcggcggaggggacgacggagaccttggcct 478
Query: 475 gccggttctgcacggtgagcttgacggtgacgcggaggcccttccagtccttggcggtct 534
| |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 479 gacggttctggacggtgagcttgacggtgacgcggaggcccttccagtccttggccgtct 538
Query: 535 ccttggcgatgtcctcgccgatcttcttcggggagagaccgag 577
|||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 539 ccttggcgatgtcctcaccgatcttcttgggggagagaccgag 581
>gb|BF628416.2|BF628416 HVSMEb0003P15f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0003P15f, mRNA sequence
Length = 523
Score = 589 bits (297), Expect = e-167
Identities = 378/405 (93%)
Strand = Plus / Minus
Query: 227 gtccttggggtccttcccatcgacggtgcacccgacgctgacgcaggtccccaggatctc 286
|||||||||||||||||| | ||||||||| || |||||||||||||| || ||||||||
Sbjct: 519 gtccttggggtccttcccgttgacggtgcagccaacgctgacgcaggtgccgaggatctc 460
Query: 287 cttgacggtcccggccaactccttggccatggacctgttccgcatggtcttggcgatctc 346
||||||||||||||||| ||||||||||||||||||| || |||| |||||||||||||
Sbjct: 459 cttgacggtcccggccatctccttggccatggacctggtcttcatgatcttggcgatctc 400
Query: 347 gatgacgtcgtcgaggctgatgttgccgctgtgcttgatgttcttgaccttcttcctgtc 406
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 399 gatgacgtcgtcgaggctgatgttgccgttgtgcttgatgttcttgaccttcttcctgtc 340
Query: 407 cctctcgggttccttgagcgccttgatgacgagcgccgcggcggaggggacgacggagac 466
||||||||| |||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 339 cctctcgggctccttgagggacttgatgacgagcgccgcggcggaggggacgacggagac 280
Query: 467 cttggcctgccggttctgcacggtgagcttgacggtgacgcggaggcccttccagtcctt 526
||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 cttggcctgacggttctggacggtgagcttgacggtgacgcggaggcccttccagtcctt 220
Query: 527 ggcggtctccttggcgatgtcctcgccgatcttcttcggggagagaccgagcgggccgat 586
|| ||||||||||| |||||||| ||||||||||| |||||||||||||| || |||||
Sbjct: 219 agccgtctccttggcaatgtcctcaccgatcttcttgggggagagaccgaggggaccgat 160
Query: 587 cttgggggccagcgacgacgccgcgccgacctcgcctcccgtcac 631
||||||||| |||||||||||||||||||| |||||||| |||||
Sbjct: 159 cttgggggcgagcgacgacgccgcgccgacttcgcctccggtcac 115
>gb|CA022995.1|CA022995 HZ44P03r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ44P03
5-PRIME, mRNA sequence
Length = 523
Score = 589 bits (297), Expect = e-167
Identities = 378/405 (93%)
Strand = Plus / Minus
Query: 227 gtccttggggtccttcccatcgacggtgcacccgacgctgacgcaggtccccaggatctc 286
|||||||||||||||||| ||||||||||| || |||||||||||||| || ||||||||
Sbjct: 520 gtccttggggtccttcccgtcgacggtgcagccaacgctgacgcaggtgccgaggatctc 461
Query: 287 cttgacggtcccggccaactccttggccatggacctgttccgcatggtcttggcgatctc 346
||||||||||||||||| ||||||||||||||||||| || |||| |||||||||||||
Sbjct: 460 cttgacggtcccggccatctccttggccatggacctggtcttcatgatcttggcgatctc 401
Query: 347 gatgacgtcgtcgaggctgatgttgccgctgtgcttgatgttcttgaccttcttcctgtc 406
|||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||
Sbjct: 400 gatgacgtcgtcgaggctgatgttgccgttgtgcttgatgttcttgactttcttcctgtc 341
Query: 407 cctctcgggttccttgagcgccttgatgacgagcgccgcggcggaggggacgacggagac 466
||||||||| |||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 340 cctctcgggctccttgagggacttgatgacgagcgccgcggcggaggggacgacggagac 281
Query: 467 cttggcctgccggttctgcacggtgagcttgacggtgacgcggaggcccttccagtcctt 526
||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 cttggcctgacggttctggacggtgagcttgacggtgacgcggaggcccttccagtcctt 221
Query: 527 ggcggtctccttggcgatgtcctcgccgatcttcttcggggagagaccgagcgggccgat 586
|| ||||||||||| |||||||| ||||||||||| |||||||||||||| || |||||
Sbjct: 220 agccgtctccttggcaatgtcctcaccgatcttcttgggggagagaccgaggggaccgat 161
Query: 587 cttgggggccagcgacgacgccgcgccgacctcgcctcccgtcac 631
||||||||| |||||||||||||||||||| |||||||| |||||
Sbjct: 160 cttgggggcgagcgacgacgccgcgccgacttcgcctccggtcac 116
>gb|CV057618.1|CV057618 BNEL29h11 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL29h11 5' similar to
OSJNBa0093F12.16, mRNA sequence
Length = 624
Score = 589 bits (297), Expect = e-167
Identities = 415/453 (91%), Gaps = 1/453 (0%)
Strand = Plus / Minus
Query: 179 ttaagctgaggggatctcgacctcaccatcatcgatctcctgctgcaagtccttggggtc 238
|||||| ||||||||||||||||| || || ||||||||| ||||| ||||||||||||
Sbjct: 552 ttaagcagaggggatctcgacctcgccgtcgtcgatctccgtctgcaggtccttggggtc 493
Query: 239 cttcccatcgacggtgcacccgacgctgacgcaggtccccaggatctccttgacggtccc 298
|||||| ||||||||||| || |||||||||||||| || ||||||||||||||||||||
Sbjct: 492 cttcccgtcgacggtgcagccaacgctgacgcaggtgccgaggatctccttgacggtccc 433
Query: 299 ggccaactccttggccatggacctgttccgcatggtcttggcgatctcgatgacgtcgtc 358
||||| ||||||||||||||||||| || |||| |||||||||||||||| ||||||||
Sbjct: 432 ggccatctccttggccatggacctggtcttcatgatcttggcgatctcgataacgtcgtc 373
Query: 359 gaggctgatgttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttc 418
||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 372 gagcctgatgttgccgttgtgcttgatgttcttgaccttcttcctgtccctctcgggctc 313
Query: 419 cttgagcgccttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccg 478
| |||| | |||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 312 c-tgagggacttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgacg 254
Query: 479 gttctgcacggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctcctt 538
|||||| ||||||||||||||||||||||||||||||||| |||| ||||| ||||||||
Sbjct: 253 gttctggacggtgagcttgacggtgacgcggaggcccttcaagtctttggccgtctcctt 194
Query: 539 ggcgatgtcctcgccgatcttcttcggggagagaccgagcgggccgatcttgggggccag 598
|||||||||||| ||||||||||| |||||||||||||| || |||||||||||||| ||
Sbjct: 193 ggcgatgtcctcaccgatcttcttgggggagagaccgaggggaccgatcttgggggcgag 134
Query: 599 cgacgacgccgcgccgacctcgcctcccgtcac 631
|||||||||||||||| | |||| ||| |||||
Sbjct: 133 cgacgacgccgcgccggcttcgcttccggtcac 101
>gb|BQ464114.1|BQ464114 HF01G09T HF Hordeum vulgare subsp. vulgare cDNA clone HF01G09
5-PRIME, mRNA sequence
Length = 617
Score = 571 bits (288), Expect = e-161
Identities = 372/400 (93%)
Strand = Plus / Minus
Query: 175 gcctttaagctgaggggatctcgacctcaccatcatcgatctcctgctgcaagtccttgg 234
|||||||||| ||||||||||||||||| || || ||||||||| ||||| ||||||||
Sbjct: 409 gcctttaagcagaggggatctcgacctcgccgtcgtcgatctccgtctgcaggtccttgg 350
Query: 235 ggtccttcccatcgacggtgcacccgacgctgacgcaggtccccaggatctccttgacgg 294
|||||||||| ||||||||||| || |||||||||||||| || ||||||||||||||||
Sbjct: 349 ggtccttcccgtcgacggtgcagccaacgctgacgcaggtgccgaggatctccttgacgg 290
Query: 295 tcccggccaactccttggccatggacctgttccgcatggtcttggcgatctcgatgacgt 354
||||||||| ||||||||||||||||||| || |||| |||||||||||||||||||||
Sbjct: 289 tcccggccatctccttggccatggacctggtcttcatgatcttggcgatctcgatgacgt 230
Query: 355 cgtcgaggctgatgttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgg 414
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 229 cgtcgaggctgatgttgccgttgtgcttgatgttcttgaccttcttcctgtccctctcgg 170
Query: 415 gttccttgagcgccttgatgacgagcgccgcggcggaggggacgacggagaccttggcct 474
| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 gctccttgagggacttgatgacgagcgccgcggcggaggggacgacggagaccttggcct 110
Query: 475 gccggttctgcacggtgagcttgacggtgacgcggaggcccttccagtccttggcggtct 534
| |||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct: 109 gacggttctggacggtgagcttgacggtgacgcggaggcccttccagtccttagccgtct 50
Query: 535 ccttggcgatgtcctcgccgatcttcttcggggagagacc 574
||||||| |||||||| ||||||||||| |||||||||||
Sbjct: 49 ccttggcaatgtcctcaccgatcttcttgggggagagacc 10
>gb|BQ664912.1|BQ664912 HX01G01w HX Hordeum vulgare subsp. vulgare cDNA clone HX01G01
3-PRIME, mRNA sequence
Length = 590
Score = 569 bits (287), Expect = e-161
Identities = 374/403 (92%)
Strand = Plus / Plus
Query: 175 gcctttaagctgaggggatctcgacctcaccatcatcgatctcctgctgcaagtccttgg 234
|||||||||| ||||||||||||||||| || || ||||||||| ||||| ||||||||
Sbjct: 188 gcctttaagcagaggggatctcgacctcgccgtcgtcgatctccgtctgcaggtccttgg 247
Query: 235 ggtccttcccatcgacggtgcacccgacgctgacgcaggtccccaggatctccttgacgg 294
|||||||||| ||||||||||| || |||||||||||||| || ||||||||||||||||
Sbjct: 248 ggtccttcccgtcgacggtgcagccaacgctgacgcaggtgccgaggatctccttgacgg 307
Query: 295 tcccggccaactccttggccatggacctgttccgcatggtcttggcgatctcgatgacgt 354
||||||||| ||||||||||||||||||| || |||| |||||||||||||||||||||
Sbjct: 308 tcccggccatctccttggccatggacctggtcttcatgatcttggcgatctcgatgacgt 367
Query: 355 cgtcgaggctgatgttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgg 414
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 368 cgtcgaggctgatgttgccgttgtgcttgatgttcttgaccttcttcctgtccctctcgg 427
Query: 415 gttccttgagcgccttgatgacgagcgccgcggcggaggggacgacggagaccttggcct 474
| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 gctccttgagggacttgatgacgagcgccgcggcggaggggacgacggagaccttggcct 487
Query: 475 gccggttctgcacggtgagcttgacggtgacgcggaggcccttccagtccttggcggtct 534
| |||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct: 488 gacggttctggacggtgagcttgacggtgacgcggaggcccttccagtccttagccgtct 547
Query: 535 ccttggcgatgtcctcgccgatcttcttcggggagagaccgag 577
||||| | |||||||| ||||||||||| ||||||||||||||
Sbjct: 548 ccttgccaatgtcctcaccgatcttcttgggggagagaccgag 590
>gb|BM096590.2|BM096590 EBma05_SQ001_O19_R maternal, 12 DPA, no treatment, cv Optic, EBma05
Hordeum vulgare subsp. vulgare cDNA clone
EBma05_SQ001_O19 5', mRNA sequence
Length = 490
Score = 565 bits (285), Expect = e-160
Identities = 360/385 (93%)
Strand = Plus / Minus
Query: 247 cgacggtgcacccgacgctgacgcaggtccccaggatctccttgacggtcccggccaact 306
|||||||||| || |||||||||||||| || ||||||||||||||||||||||||| ||
Sbjct: 490 cgacggtgcagccaacgctgacgcaggtgccgaggatctccttgacggtcccggccatct 431
Query: 307 ccttggccatggacctgttccgcatggtcttggcgatctcgatgacgtcgtcgaggctga 366
||||||||||||||||| || |||| |||||||||||||||||||||||||||||||||
Sbjct: 430 ccttggccatggacctggtcttcatgatcttggcgatctcgatgacgtcgtcgaggctga 371
Query: 367 tgttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcg 426
|||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct: 370 tgttgccgttgtgcttgatgttcttgaccttcttcctgtccctctcgggctccttgaggg 311
Query: 427 ccttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctgca 486
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct: 310 acttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgacggttctgga 251
Query: 487 cggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgt 546
|||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||
Sbjct: 250 cggtgagcttgacggtgacgcggaggcccttccagtccttagccgtctccttggcaatgt 191
Query: 547 cctcgccgatcttcttcggggagagaccgagcgggccgatcttgggggccagcgacgacg 606
|||| ||||||||||| |||||||||||||| || |||||||||||||| ||||||||||
Sbjct: 190 cctcaccgatcttcttgggggagagaccgaggggaccgatcttgggggcgagcgacgacg 131
Query: 607 ccgcgccgacctcgcctcccgtcac 631
|||||||||| |||||||| |||||
Sbjct: 130 ccgcgccgacttcgcctccggtcac 106
>gb|BE194732.1|BE194732 HVSMEh0086K19f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0086K19f, mRNA sequence
Length = 650
Score = 553 bits (279), Expect = e-156
Identities = 388/423 (91%), Gaps = 1/423 (0%)
Strand = Plus / Minus
Query: 210 tcgatctcctgctgcaagtccttggggtcctt-cccatcgacggtgcacccgacgctgac 268
|||||||||| | ||| ||||||||||||||| ||| ||| ||||||| || ||||||||
Sbjct: 520 tcgatctccttcggcaggtccttggggtccttacccgtcgccggtgcagccaacgctgac 461
Query: 269 gcaggtccccaggatctccttgacggtcccggccaactccttggccatggacctgttccg 328
|||||| || ||||||||||||||||||||||||| |||||||||||||||| || ||
Sbjct: 460 gcaggtgccgaggatctccttgacggtcccggccatctccttggccatggacttggtctt 401
Query: 329 catggtcttggcgatctcgatgacgtcgtcgaggctgatgttgccgctgtgcttgatgtt 388
|||| ||||| |||||||||||||||||||||||||||||| ||| |||||||||||||
Sbjct: 400 catgatcttgccgatctcgatgacgtcgtcgaggctgatgtgcccgttgtgcttgatgtt 341
Query: 389 cttgaccttcttcctgtccctctcgggttccttgagcgccttgatgacgagcgccgcggc 448
||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||||
Sbjct: 340 cttgaccttcttcctgtccctctcgggctccttgagggacttgatgacgagcgccgcggc 281
Query: 449 ggaggggacgacggagaccttggcctgccggttctgcacggtgagcttgacggtgacgcg 508
||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||
Sbjct: 280 ggaggggacgacggagaccttggcctgacggttctggacggtgagcttgacggtgacgcg 221
Query: 509 gaggcccttccagtccttggcggtctccttggcgatgtcctcgccgatcttcttcgggga 568
|||||||||||||||||| || ||||||||||| |||||||| ||||||||||| |||||
Sbjct: 220 gaggcccttccagtccttagccgtctccttggcaatgtcctcaccgatcttcttggggga 161
Query: 569 gagaccgagcgggccgatcttgggggccagcgacgacgccgcgccgacctcgcctcccgt 628
||||||||| || |||||||||||||| |||||||||||||||||||| |||||||| ||
Sbjct: 160 gagaccgaggggaccgatcttgggggcgagcgacgacgccgcgccgacttcgcctccggt 101
Query: 629 cac 631
|||
Sbjct: 100 cac 98
>gb|AV915152.1|AV915152 AV915152 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags13b12 5', mRNA sequence
Length = 630
Score = 553 bits (279), Expect = e-156
Identities = 373/404 (92%), Gaps = 1/404 (0%)
Strand = Plus / Minus
Query: 175 gcctttaagctgaggggatctcgacctcaccatcatcgatctcctgctgcaagtccttgg 234
|||||||||| ||||||||||||||||| || || ||||||||| ||||| ||||||||
Sbjct: 412 gcctttaagcagaggggatctcgacctcgccgtcgtcgatctccgtctgcaggtccttgg 353
Query: 235 ggtccttcccatcgacggtgcacccgacgctgacgcaggtccccaggatctccttgacgg 294
|||||||||| ||||||||||| || |||||||||||||| || ||||||||||||||||
Sbjct: 352 ggtccttcccgtcgacggtgcagccaacgctgacgcaggtgccgaggatctccttgacgg 293
Query: 295 tcccggccaactccttggccatggacctgttccgcatggtcttggcgatctcgatgacgt 354
||||||||| ||||||||||||||||||| || |||| |||||||||||||||||||||
Sbjct: 292 tcccggccatctccttggccatggacctggtcttcatgatcttggcgatctcgatgacgt 233
Query: 355 cgtcgaggctgatgttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgg 414
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 232 cgtcgaggctgatgttgccgttgtgcttgatgttcttgaccttcttcctgtccctctcgg 173
Query: 415 gttccttgagcgccttgatgacgagcgccgcggcggaggggacgacggagaccttggcct 474
| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 gctccttgagggacttgatgacgagcgccgcggcggaggggacgacggagaccttggcct 113
Query: 475 gccggttctgcacggtgagcttgacggtgacgcggaggcccttccagtccttggcggtct 534
| |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 112 gacggttctggacggtgagcttgacggtgacgcggaggcccttccagtccttggccgtct 53
Query: 535 -ccttggcgatgtcctcgccgatcttcttcggggagagaccgag 577
|||||||||||||||| ||||| | | ||||||||||||||
Sbjct: 52 nccttggcgatgtcctcaccgatnctnntgggggagagaccgag 9
>gb|AV911747.1|AV911747 AV911747 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak1e05 3', mRNA sequence
Length = 557
Score = 547 bits (276), Expect = e-154
Identities = 357/384 (92%)
Strand = Plus / Plus
Query: 175 gcctttaagctgaggggatctcgacctcaccatcatcgatctcctgctgcaagtccttgg 234
|||||||||| ||||||||||||||||| || || ||||||||| ||||| ||||||||
Sbjct: 173 gcctttaagcagaggggatctcgacctcgccgtcgtcgatctccgtctgcaggtccttgg 232
Query: 235 ggtccttcccatcgacggtgcacccgacgctgacgcaggtccccaggatctccttgacgg 294
|||||||||| ||||||||||| || |||||||||||||| || ||||||||||||||||
Sbjct: 233 ggtccttcccgtcgacggtgcagccaacgctgacgcaggtgccgaggatctccttgacgg 292
Query: 295 tcccggccaactccttggccatggacctgttccgcatggtcttggcgatctcgatgacgt 354
||||||||| ||||||||||||||||||| || |||| |||||||||||||||||||||
Sbjct: 293 tcccggccatctccttggccatggacctggtcttcatgatcttggcgatctcgatgacgt 352
Query: 355 cgtcgaggctgatgttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgg 414
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 353 cgtcgaggctgatgttgccgttgtgcttgatgttcttgaccttcttcctgtccctctcgg 412
Query: 415 gttccttgagcgccttgatgacgagcgccgcggcggaggggacgacggagaccttggcct 474
| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 gctccttgagggacttgatgacgagcgccgcggcggaggggacgacggagaccttggcct 472
Query: 475 gccggttctgcacggtgagcttgacggtgacgcggaggcccttccagtccttggcggtct 534
| |||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct: 473 gacggttctggacggtgagcttgacggtgacgcggaggcccttccagtccttagccgtct 532
Query: 535 ccttggcgatgtcctcgccgatct 558
||||||| |||||||| |||||||
Sbjct: 533 ccttggcaatgtcctcaccgatct 556
>gb|BJ545838.1|BJ545838 BJ545838 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak27a24 3', mRNA sequence
Length = 525
Score = 547 bits (276), Expect = e-154
Identities = 357/384 (92%)
Strand = Plus / Plus
Query: 175 gcctttaagctgaggggatctcgacctcaccatcatcgatctcctgctgcaagtccttgg 234
|||||||||| ||||||||||||||||| || || ||||||||| ||||| ||||||||
Sbjct: 141 gcctttaagcagaggggatctcgacctcgccgtcgtcgatctccgtctgcaggtccttgg 200
Query: 235 ggtccttcccatcgacggtgcacccgacgctgacgcaggtccccaggatctccttgacgg 294
|||||||||| ||||||||||| || |||||||||||||| || ||||||||||||||||
Sbjct: 201 ggtccttcccgtcgacggtgcagccaacgctgacgcaggtgccgaggatctccttgacgg 260
Query: 295 tcccggccaactccttggccatggacctgttccgcatggtcttggcgatctcgatgacgt 354
||||||||| ||||||||||||||||||| || |||| |||||||||||||||||||||
Sbjct: 261 tcccggccatctccttggccatggacctggtcttcatgatcttggcgatctcgatgacgt 320
Query: 355 cgtcgaggctgatgttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgg 414
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cgtcgaggctgatgttgccgttgtgcttgatgttcttgaccttcttcctgtccctctcgg 380
Query: 415 gttccttgagcgccttgatgacgagcgccgcggcggaggggacgacggagaccttggcct 474
| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gctccttgagggacttgatgacgagcgccgcggcggaggggacgacggagaccttggcct 440
Query: 475 gccggttctgcacggtgagcttgacggtgacgcggaggcccttccagtccttggcggtct 534
| |||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct: 441 gacggttctggacggtgagcttgacggtgacgcggaggcccttccagtccttagccgtct 500
Query: 535 ccttggcgatgtcctcgccgatct 558
||||||| |||||||| |||||||
Sbjct: 501 ccttggcaatgtcctcaccgatct 524
>gb|BQ665667.1|BQ665667 HX04K02u HX Hordeum vulgare subsp. vulgare cDNA clone HX04K02
3-PRIME, mRNA sequence
Length = 567
Score = 539 bits (272), Expect = e-152
Identities = 350/376 (93%)
Strand = Plus / Plus
Query: 175 gcctttaagctgaggggatctcgacctcaccatcatcgatctcctgctgcaagtccttgg 234
|||||||||| ||||||||||||||||| || || ||||||||| ||||| ||||||||
Sbjct: 188 gcctttaagcagaggggatctcgacctcgccgtcgtcgatctccgtctgcaggtccttgg 247
Query: 235 ggtccttcccatcgacggtgcacccgacgctgacgcaggtccccaggatctccttgacgg 294
|||||||||| ||||||||||| || |||||||||||||| || ||||||||||||||||
Sbjct: 248 ggtccttcccgtcgacggtgcagccaacgctgacgcaggtgccgaggatctccttgacgg 307
Query: 295 tcccggccaactccttggccatggacctgttccgcatggtcttggcgatctcgatgacgt 354
||||||||| ||||||||||||||||||| || |||| |||||||||||||||||||||
Sbjct: 308 tcccggccatctccttggccatggacctggtcttcatgatcttggcgatctcgatgacgt 367
Query: 355 cgtcgaggctgatgttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgg 414
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 368 cgtcgaggctgatgttgccgttgtgcttgatgttcttgaccttcttcctgtccctctcgg 427
Query: 415 gttccttgagcgccttgatgacgagcgccgcggcggaggggacgacggagaccttggcct 474
| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 gctccttgagggacttgatgacgagcgccgcggcggaggggacgacggagaccttggcct 487
Query: 475 gccggttctgcacggtgagcttgacggtgacgcggaggcccttccagtccttggcggtct 534
| |||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct: 488 gacggttctggacggtgagcttgacggtgacgcggaggcccttccagtccttagccgtct 547
Query: 535 ccttggcgatgtcctc 550
||||||| ||||||||
Sbjct: 548 ccttggcaatgtcctc 563
>gb|AL503548.1|AL503548 AL503548 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW02I21T 5', mRNA sequence
Length = 450
Score = 533 bits (269), Expect = e-150
Identities = 345/371 (92%)
Strand = Plus / Minus
Query: 261 acgctgacgcaggtccccaggatctccttgacggtcccggccaactccttggccatggac 320
|||||||||||||| || ||||||||||||||||| ||||||| ||||||||||||||||
Sbjct: 433 acgctgacgcaggtgccgaggatctccttgacggtaccggccatctccttggccatggac 374
Query: 321 ctgttccgcatggtcttggcgatctcgatgacgtcgtcgaggctgatgttgccgctgtgc 380
||| || |||| ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 373 ctggtcttcatgatcttggcgatctcgatgacgtcgtcgaggctgatgttgccgttgtgc 314
Query: 381 ttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgccttgatgacgagc 440
||||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||
Sbjct: 313 ttgatgttcttgaccttcttcctgtccctctcgggctccttgagggacttgatgacgagc 254
Query: 441 gccgcggcggaggggacgacggagaccttggcctgccggttctgcacggtgagcttgacg 500
||| ||||||||||||||||||||||| ||||||| |||||||| |||||||||||||||
Sbjct: 253 gccncggcggaggggacgacggagaccntggcctgacggttctggacggtgagcttgacg 194
Query: 501 gtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcctcgccgatcttc 560
|||||||||||||||||||||||||| || ||||||||||| |||||||| |||||||||
Sbjct: 193 gtgacgcggaggcccttccagtccttagccgtctccttggcaatgtcctcaccgatcttc 134
Query: 561 ttcggggagagaccgagcgggccgatcttgggggccagcgacgacgccgcgccgacctcg 620
|| |||||||||||||| || |||||||||||||| |||||||||||||||||||| |||
Sbjct: 133 ttgggggagagaccgaggggaccgatcttgggggcgagcgacgacgccgcgccgacttcg 74
Query: 621 cctcccgtcac 631
||||| |||||
Sbjct: 73 cctccggtcac 63
>gb|CK124089.1|CK124089 BES1824107a20 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010A207 5-PRIME, mRNA sequence
Length = 775
Score = 533 bits (269), Expect = e-150
Identities = 391/432 (90%)
Strand = Plus / Minus
Query: 188 ggggatctcgacctcaccatcatcgatctcctgctgcaagtccttggggtccttcccatc 247
||||||||| ||||| || || ||||||||| ||| | |||||||||||||| || ||
Sbjct: 543 ggggatctcaacctcgccgtcgtcgatctccgtctgaagatccttggggtccttgccgtc 484
Query: 248 gacggtgcacccgacgctgacgcaggtccccaggatctccttgacggtcccggccaactc 307
||||||||| ||||||||||||||||| || ||||||||||||||||| ||||||| |||
Sbjct: 483 gacggtgcanccgacgctgacgcaggtgccgaggatctccttgacggtgccggccatctc 424
Query: 308 cttggccatggacctgttccgcatggtcttggcgatctcgatgacgtcgtcgaggctgat 367
|||||||||||| | | |||| ||||||||||||||||||||||||||||||||||
Sbjct: 423 cttggccatggagcgcaccttcatgatcttggcgatctcgatgacgtcgtcgaggctgat 364
Query: 368 gttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgc 427
||||||| ||||||||||||||||||||||||| | |||||||||||| |||||||||||
Sbjct: 363 gttgccgttgtgcttgatgttcttgaccttcttgcggtccctctcgggctccttgagcgc 304
Query: 428 cttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctgcac 487
|||||||||||| || |||||||||||||||||||| ||||||||||| || ||||| ||
Sbjct: 303 cttgatgacgagggcagcggcggaggggacgacggacaccttggcctggcgattctggac 244
Query: 488 ggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtc 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 ggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtc 184
Query: 548 ctcgccgatcttcttcggggagagaccgagcgggccgatcttgggggccagcgacgacgc 607
|| ||||||||||| ||||||||||||||||| ||||||||||||||||| ||||| ||
Sbjct: 183 ttctccgatcttcttgggggagagaccgagcggaccgatcttgggggccagggacgaggc 124
Query: 608 cgcgccgacctc 619
|||||||||||
Sbjct: 123 ggcgccgacctc 112
>gb|BF619747.3|BF619747 HVSMEc0009B10f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0009B10f, mRNA sequence
Length = 593
Score = 531 bits (268), Expect = e-150
Identities = 391/432 (90%)
Strand = Plus / Minus
Query: 188 ggggatctcgacctcaccatcatcgatctcctgctgcaagtccttggggtccttcccatc 247
||||||||| ||||| || || ||||||||| ||| | |||||||||||||| || ||
Sbjct: 520 ggggatctcaacctcgccgtcgtcgatctccgtctgaagatccttggggtccttgccgtc 461
Query: 248 gacggtgcacccgacgctgacgcaggtccccaggatctccttgacggtcccggccaactc 307
||||||||| ||||||||||||||||| || ||||||||||||||||| ||||||| |||
Sbjct: 460 gacggtgcagccgacgctgacgcaggtgccgaggatctccttgacggtgccggccatctc 401
Query: 308 cttggccatggacctgttccgcatggtcttggcgatctcgatgacgtcgtcgaggctgat 367
|||||||||||| | | |||| ||||||||||||||||||||||||||||||||||
Sbjct: 400 cttggccatggagcgcaccttcatgatcttggcgatctcgatgacgtcgtcgaggctgat 341
Query: 368 gttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgc 427
||||||| ||||||||||||||||||||||||| | |||||||||||| |||||||||||
Sbjct: 340 gttgccgttgtgcttgatgttcttgaccttcttgcggtccctctcgggctccttgagcgc 281
Query: 428 cttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctgcac 487
|||||||||||| || |||||||||||||||||||| ||||||||||| || ||||| ||
Sbjct: 280 cttgatgacgagggcagcggcggaggggacgacggacaccttggcctggcgattctggac 221
Query: 488 ggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtc 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 ggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtc 161
Query: 548 ctcgccgatcttcttcggggagagaccgagcgggccgatcttgggggccagcgacgacgc 607
|| ||||||||||| ||||||||||||||||| ||||||||||||||||| ||||| ||
Sbjct: 160 ttctccgatcttcttgggggagagaccgagcggaccgatcttgggggccagggacgaggc 101
Query: 608 cgcgccgacctc 619
|||||||||||
Sbjct: 100 ggcgccgacctc 89
>gb|BM374592.1|BM374592 EBma05_SQ002_B13_R maternal, 12 DPA, no treatment, cv Optic, EBma05
Hordeum vulgare subsp. vulgare cDNA clone
EBma05_SQ002_B13 5', mRNA sequence
Length = 531
Score = 531 bits (268), Expect = e-150
Identities = 391/432 (90%)
Strand = Plus / Minus
Query: 188 ggggatctcgacctcaccatcatcgatctcctgctgcaagtccttggggtccttcccatc 247
||||||||| ||||| || || ||||||||| ||| | |||||||||||||| || ||
Sbjct: 524 ggggatctcaacctcgccgtcgtcgatctccgtctgaagatccttggggtccttgccgtc 465
Query: 248 gacggtgcacccgacgctgacgcaggtccccaggatctccttgacggtcccggccaactc 307
||||||||| ||||||||||||||||| || ||||||||||||||||| ||||||| |||
Sbjct: 464 gacggtgcagccgacgctgacgcaggtgccgaggatctccttgacggtgccggccatctc 405
Query: 308 cttggccatggacctgttccgcatggtcttggcgatctcgatgacgtcgtcgaggctgat 367
|||||||||||| | | |||| ||||||||||||||||||||||||||||||||||
Sbjct: 404 cttggccatggagcgcaccttcatgatcttggcgatctcgatgacgtcgtcgaggctgat 345
Query: 368 gttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgc 427
||||||| ||||||||||||||||||||||||| | |||||||||||| |||||||||||
Sbjct: 344 gttgccgttgtgcttgatgttcttgaccttcttgcggtccctctcgggctccttgagcgc 285
Query: 428 cttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctgcac 487
|||||||||||| || |||||||||||||||||||| ||||||||||| || ||||| ||
Sbjct: 284 cttgatgacgagggcagcggcggaggggacgacggacaccttggcctggcgattctggac 225
Query: 488 ggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtc 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 ggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtc 165
Query: 548 ctcgccgatcttcttcggggagagaccgagcgggccgatcttgggggccagcgacgacgc 607
|| ||||||||||| ||||||||||||||||| ||||||||||||||||| ||||| ||
Sbjct: 164 ttctccgatcttcttgggggagagaccgagcggaccgatcttgggggccagggacgaggc 105
Query: 608 cgcgccgacctc 619
|||||||||||
Sbjct: 104 ggcgccgacctc 93
>gb|BQ458374.1|BQ458374 HA05G17r HA Hordeum vulgare subsp. vulgare cDNA clone HA05G17
5-PRIME, mRNA sequence
Length = 619
Score = 531 bits (268), Expect = e-150
Identities = 391/432 (90%)
Strand = Plus / Minus
Query: 188 ggggatctcgacctcaccatcatcgatctcctgctgcaagtccttggggtccttcccatc 247
||||||||| ||||| || || ||||||||| ||| | |||||||||||||| || ||
Sbjct: 540 ggggatctcaacctcgccgtcgtcgatctccgtctgaagatccttggggtccttgccgtc 481
Query: 248 gacggtgcacccgacgctgacgcaggtccccaggatctccttgacggtcccggccaactc 307
||||||||| ||||||||||||||||| || ||||||||||||||||| ||||||| |||
Sbjct: 480 gacggtgcagccgacgctgacgcaggtgccgaggatctccttgacggtgccggccatctc 421
Query: 308 cttggccatggacctgttccgcatggtcttggcgatctcgatgacgtcgtcgaggctgat 367
|||||||||||| | | |||| ||||||||||||||||||||||||||||||||||
Sbjct: 420 cttggccatggagcgcaccttcatgatcttggcgatctcgatgacgtcgtcgaggctgat 361
Query: 368 gttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgc 427
||||||| ||||||||||||||||||||||||| | |||||||||||| |||||||||||
Sbjct: 360 gttgccgttgtgcttgatgttcttgaccttcttgcggtccctctcgggctccttgagcgc 301
Query: 428 cttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctgcac 487
|||||||||||| || |||||||||||||||||||| ||||||||||| || ||||| ||
Sbjct: 300 cttgatgacgagggcagcggcggaggggacgacggacaccttggcctggcgattctggac 241
Query: 488 ggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtc 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 ggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtc 181
Query: 548 ctcgccgatcttcttcggggagagaccgagcgggccgatcttgggggccagcgacgacgc 607
|| ||||||||||| ||||||||||||||||| ||||||||||||||||| ||||| ||
Sbjct: 180 ttctccgatcttcttgggggagagaccgagcggaccgatcttgggggccagggacgaggc 121
Query: 608 cgcgccgacctc 619
|||||||||||
Sbjct: 120 ggcgccgacctc 109
>gb|BQ458524.1|BQ458524 HA04P14r HA Hordeum vulgare subsp. vulgare cDNA clone HA04P14
5-PRIME, mRNA sequence
Length = 610
Score = 531 bits (268), Expect = e-150
Identities = 391/432 (90%)
Strand = Plus / Minus
Query: 188 ggggatctcgacctcaccatcatcgatctcctgctgcaagtccttggggtccttcccatc 247
||||||||| ||||| || || ||||||||| ||| | |||||||||||||| || ||
Sbjct: 542 ggggatctcaacctcgccgtcgtcgatctccgtctgaagatccttggggtccttgccgtc 483
Query: 248 gacggtgcacccgacgctgacgcaggtccccaggatctccttgacggtcccggccaactc 307
||||||||| ||||||||||||||||| || ||||||||||||||||| ||||||| |||
Sbjct: 482 gacggtgcagccgacgctgacgcaggtgccgaggatctccttgacggtgccggccatctc 423
Query: 308 cttggccatggacctgttccgcatggtcttggcgatctcgatgacgtcgtcgaggctgat 367
|||||||||||| | | |||| ||||||||||||||||||||||||||||||||||
Sbjct: 422 cttggccatggagcgcaccttcatgatcttggcgatctcgatgacgtcgtcgaggctgat 363
Query: 368 gttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgc 427
||||||| ||||||||||||||||||||||||| | |||||||||||| |||||||||||
Sbjct: 362 gttgccgttgtgcttgatgttcttgaccttcttgcggtccctctcgggctccttgagcgc 303
Query: 428 cttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctgcac 487
|||||||||||| || |||||||||||||||||||| ||||||||||| || ||||| ||
Sbjct: 302 cttgatgacgagggcagcggcggaggggacgacggacaccttggcctggcgattctggac 243
Query: 488 ggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtc 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtc 183
Query: 548 ctcgccgatcttcttcggggagagaccgagcgggccgatcttgggggccagcgacgacgc 607
|| ||||||||||| ||||||||||||||||| ||||||||||||||||| ||||| ||
Sbjct: 182 ttctccgatcttcttgggggagagaccgagcggaccgatcttgggggccagggacgaggc 123
Query: 608 cgcgccgacctc 619
|||||||||||
Sbjct: 122 ggcgccgacctc 111
>gb|BQ466707.1|BQ466707 HS01F06T HS Hordeum vulgare subsp. vulgare cDNA clone HS01F06
5-PRIME, mRNA sequence
Length = 596
Score = 531 bits (268), Expect = e-150
Identities = 391/432 (90%)
Strand = Plus / Minus
Query: 188 ggggatctcgacctcaccatcatcgatctcctgctgcaagtccttggggtccttcccatc 247
||||||||| ||||| || || ||||||||| ||| | |||||||||||||| || ||
Sbjct: 544 ggggatctcaacctcgccgtcgtcgatctccgtctgaagatccttggggtccttgccgtc 485
Query: 248 gacggtgcacccgacgctgacgcaggtccccaggatctccttgacggtcccggccaactc 307
||||||||| ||||||||||||||||| || ||||||||||||||||| ||||||| |||
Sbjct: 484 gacggtgcagccgacgctgacgcaggtgccgaggatctccttgacggtgccggccatctc 425
Query: 308 cttggccatggacctgttccgcatggtcttggcgatctcgatgacgtcgtcgaggctgat 367
|||||||||||| | | |||| ||||||||||||||||||||||||||||||||||
Sbjct: 424 cttggccatggagcgcaccttcatgatcttggcgatctcgatgacgtcgtcgaggctgat 365
Query: 368 gttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgc 427
||||||| ||||||||||||||||||||||||| | |||||||||||| |||||||||||
Sbjct: 364 gttgccgttgtgcttgatgttcttgaccttcttgcggtccctctcgggctccttgagcgc 305
Query: 428 cttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctgcac 487
|||||||||||| || |||||||||||||||||||| ||||||||||| || ||||| ||
Sbjct: 304 cttgatgacgagggcagcggcggaggggacgacggacaccttggcctggcgattctggac 245
Query: 488 ggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtc 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 ggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtc 185
Query: 548 ctcgccgatcttcttcggggagagaccgagcgggccgatcttgggggccagcgacgacgc 607
|| ||||||||||| ||||||||||||||||| ||||||||||||||||| ||||| ||
Sbjct: 184 ttctccgatcttcttgggggagagaccgagcggaccgatcttgggggccagggacgaggc 125
Query: 608 cgcgccgacctc 619
|||||||||||
Sbjct: 124 ggcgccgacctc 113
>gb|BQ470975.1|BQ470975 HX04J16r HX Hordeum vulgare subsp. vulgare cDNA clone HX04J16
5-PRIME, mRNA sequence
Length = 629
Score = 531 bits (268), Expect = e-150
Identities = 391/432 (90%)
Strand = Plus / Minus
Query: 188 ggggatctcgacctcaccatcatcgatctcctgctgcaagtccttggggtccttcccatc 247
||||||||| ||||| || || ||||||||| ||| | |||||||||||||| || ||
Sbjct: 551 ggggatctcaacctcgccgtcgtcgatctccgtctgaagatccttggggtccttgccgtc 492
Query: 248 gacggtgcacccgacgctgacgcaggtccccaggatctccttgacggtcccggccaactc 307
||||||||| ||||||||||||||||| || ||||||||||||||||| ||||||| |||
Sbjct: 491 gacggtgcagccgacgctgacgcaggtgccgaggatctccttgacggtgccggccatctc 432
Query: 308 cttggccatggacctgttccgcatggtcttggcgatctcgatgacgtcgtcgaggctgat 367
|||||||||||| | | |||| ||||||||||||||||||||||||||||||||||
Sbjct: 431 cttggccatggagcgcaccttcatgatcttggcgatctcgatgacgtcgtcgaggctgat 372
Query: 368 gttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgc 427
||||||| ||||||||||||||||||||||||| | |||||||||||| |||||||||||
Sbjct: 371 gttgccgttgtgcttgatgttcttgaccttcttgcggtccctctcgggctccttgagcgc 312
Query: 428 cttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctgcac 487
|||||||||||| || |||||||||||||||||||| ||||||||||| || ||||| ||
Sbjct: 311 cttgatgacgagggcagcggcggaggggacgacggacaccttggcctggcgattctggac 252
Query: 488 ggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtc 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 ggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtc 192
Query: 548 ctcgccgatcttcttcggggagagaccgagcgggccgatcttgggggccagcgacgacgc 607
|| ||||||||||| ||||||||||||||||| ||||||||||||||||| ||||| ||
Sbjct: 191 ttctccgatcttcttgggggagagaccgagcggaccgatcttgggggccagggacgaggc 132
Query: 608 cgcgccgacctc 619
|||||||||||
Sbjct: 131 ggcgccgacctc 120
>gb|BQ767601.1|BQ767601 EBro08_SQ009_I07 _R root, 3 week, drought-stressed, cv Optic,
EBro08 Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ009_I07 5', mRNA sequence
Length = 553
Score = 531 bits (268), Expect = e-150
Identities = 391/432 (90%)
Strand = Plus / Minus
Query: 188 ggggatctcgacctcaccatcatcgatctcctgctgcaagtccttggggtccttcccatc 247
||||||||| ||||| || || ||||||||| ||| | |||||||||||||| || ||
Sbjct: 547 ggggatctcaacctcgccgtcgtcgatctccgtctgaagatccttggggtccttgccgtc 488
Query: 248 gacggtgcacccgacgctgacgcaggtccccaggatctccttgacggtcccggccaactc 307
||||||||| ||||||||||||||||| || ||||||||||||||||| ||||||| |||
Sbjct: 487 gacggtgcagccgacgctgacgcaggtgccgaggatctccttgacggtgccggccatctc 428
Query: 308 cttggccatggacctgttccgcatggtcttggcgatctcgatgacgtcgtcgaggctgat 367
|||||||||||| | | |||| ||||||||||||||||||||||||||||||||||
Sbjct: 427 cttggccatggagcgcaccttcatgatcttggcgatctcgatgacgtcgtcgaggctgat 368
Query: 368 gttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgc 427
||||||| ||||||||||||||||||||||||| | |||||||||||| |||||||||||
Sbjct: 367 gttgccgttgtgcttgatgttcttgaccttcttgcggtccctctcgggctccttgagcgc 308
Query: 428 cttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctgcac 487
|||||||||||| || |||||||||||||||||||| ||||||||||| || ||||| ||
Sbjct: 307 cttgatgacgagggcagcggcggaggggacgacggacaccttggcctggcgattctggac 248
Query: 488 ggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtc 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 ggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtc 188
Query: 548 ctcgccgatcttcttcggggagagaccgagcgggccgatcttgggggccagcgacgacgc 607
|| ||||||||||| ||||||||||||||||| ||||||||||||||||| ||||| ||
Sbjct: 187 ttctccgatcttcttgggggagagaccgagcggaccgatcttgggggccagggacgaggc 128
Query: 608 cgcgccgacctc 619
|||||||||||
Sbjct: 127 ggcgccgacctc 116
>gb|BU977203.1|BU977203 HA11A06r HA Hordeum vulgare subsp. vulgare cDNA clone HA11A06
5-PRIME, mRNA sequence
Length = 625
Score = 531 bits (268), Expect = e-150
Identities = 391/432 (90%)
Strand = Plus / Minus
Query: 188 ggggatctcgacctcaccatcatcgatctcctgctgcaagtccttggggtccttcccatc 247
||||||||| ||||| || || ||||||||| ||| | |||||||||||||| || ||
Sbjct: 547 ggggatctcaacctcgccgtcgtcgatctccgtctgaagatccttggggtccttgccgtc 488
Query: 248 gacggtgcacccgacgctgacgcaggtccccaggatctccttgacggtcccggccaactc 307
||||||||| ||||||||||||||||| || ||||||||||||||||| ||||||| |||
Sbjct: 487 gacggtgcagccgacgctgacgcaggtgccgaggatctccttgacggtgccggccatctc 428
Query: 308 cttggccatggacctgttccgcatggtcttggcgatctcgatgacgtcgtcgaggctgat 367
|||||||||||| | | |||| ||||||||||||||||||||||||||||||||||
Sbjct: 427 cttggccatggagcgcaccttcatgatcttggcgatctcgatgacgtcgtcgaggctgat 368
Query: 368 gttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgc 427
||||||| ||||||||||||||||||||||||| | |||||||||||| |||||||||||
Sbjct: 367 gttgccgttgtgcttgatgttcttgaccttcttgcggtccctctcgggctccttgagcgc 308
Query: 428 cttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctgcac 487
|||||||||||| || |||||||||||||||||||| ||||||||||| || ||||| ||
Sbjct: 307 cttgatgacgagggcagcggcggaggggacgacggacaccttggcctggcgattctggac 248
Query: 488 ggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtc 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 ggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtc 188
Query: 548 ctcgccgatcttcttcggggagagaccgagcgggccgatcttgggggccagcgacgacgc 607
|| ||||||||||| ||||||||||||||||| ||||||||||||||||| ||||| ||
Sbjct: 187 ttctccgatcttcttgggggagagaccgagcggaccgatcttgggggccagggacgaggc 128
Query: 608 cgcgccgacctc 619
|||||||||||
Sbjct: 127 ggcgccgacctc 116
>gb|BU978132.1|BU978132 HA12K05r HA Hordeum vulgare subsp. vulgare cDNA clone HA12K05
5-PRIME, mRNA sequence
Length = 627
Score = 531 bits (268), Expect = e-150
Identities = 391/432 (90%)
Strand = Plus / Minus
Query: 188 ggggatctcgacctcaccatcatcgatctcctgctgcaagtccttggggtccttcccatc 247
||||||||| ||||| || || ||||||||| ||| | |||||||||||||| || ||
Sbjct: 547 ggggatctcaacctcgccgtcgtcgatctccgtctgaagatccttggggtccttgccgtc 488
Query: 248 gacggtgcacccgacgctgacgcaggtccccaggatctccttgacggtcccggccaactc 307
||||||||| ||||||||||||||||| || ||||||||||||||||| ||||||| |||
Sbjct: 487 gacggtgcagccgacgctgacgcaggtgccgaggatctccttgacggtgccggccatctc 428
Query: 308 cttggccatggacctgttccgcatggtcttggcgatctcgatgacgtcgtcgaggctgat 367
|||||||||||| | | |||| ||||||||||||||||||||||||||||||||||
Sbjct: 427 cttggccatggagcgcaccttcatgatcttggcgatctcgatgacgtcgtcgaggctgat 368
Query: 368 gttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgc 427
||||||| ||||||||||||||||||||||||| | |||||||||||| |||||||||||
Sbjct: 367 gttgccgttgtgcttgatgttcttgaccttcttgcggtccctctcgggctccttgagcgc 308
Query: 428 cttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctgcac 487
|||||||||||| || |||||||||||||||||||| ||||||||||| || ||||| ||
Sbjct: 307 cttgatgacgagggcagcggcggaggggacgacggacaccttggcctggcgattctggac 248
Query: 488 ggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtc 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 ggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtc 188
Query: 548 ctcgccgatcttcttcggggagagaccgagcgggccgatcttgggggccagcgacgacgc 607
|| ||||||||||| ||||||||||||||||| ||||||||||||||||| ||||| ||
Sbjct: 187 ttctccgatcttcttgggggagagaccgagcggaccgatcttgggggccagggacgaggc 128
Query: 608 cgcgccgacctc 619
|||||||||||
Sbjct: 127 ggcgccgacctc 116
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 98,024
Number of Sequences: 312970
Number of extensions: 98024
Number of successful extensions: 28812
Number of sequences better than 0.5: 200
Number of HSP's better than 0.5 without gapping: 200
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 28441
Number of HSP's gapped (non-prelim): 350
length of query: 634
length of database: 175,134,539
effective HSP length: 19
effective length of query: 615
effective length of database: 169,188,109
effective search space: 104050687035
effective search space used: 104050687035
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)