BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1804904.2.3
(801 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BM816732.1|BM816732 HB02C05_T3.ab1 HB Hordeum vulgare su... 442 e-123
gb|BM377475.2|BM377475 EBem04_SQ003_D24_R embryo, 12 DPA, n... 442 e-123
gb|BM377699.2|BM377699 EBem04_SQ003_O16_R embryo, 12 DPA, n... 442 e-123
gb|BI780787.2|BI780787 EBes01_SQ002_D08_R embryo sac, 4-6 D... 442 e-123
gb|BM101365.2|BM101365 EBpi01_SQ003_K07_R pistil, 1 DPA, no... 442 e-123
gb|BM370305.2|BM370305 EBro08_SQ003_M14_R root, 3 week, dro... 442 e-123
gb|BQ758693.1|BQ758693 EBma07_SQ002_E13_R maternal, 21 DPA,... 442 e-123
gb|BQ762662.1|BQ762662 EBro02_SQ004_L15_R root, 3 week, hyd... 442 e-123
gb|BQ764226.1|BQ764226 EBan01_SQ005_A12_R anther, yellow st... 442 e-123
gb|BQ766935.1|BQ766935 EBro08_SQ007_D15_R root, 3 week, dro... 442 e-123
gb|BQ768014.1|BQ768014 EBro08_SQ010_O11_R root, 3 week, dro... 442 e-123
gb|BQ470561.1|BQ470561 HX03F15r HX Hordeum vulgare subsp. v... 438 e-121
gb|BG344422.1|BG344422 HVSMEg0009D14f Hordeum vulgare pre-a... 436 e-121
gb|BF263456.3|BF263456 HV_CEa0006M17f Hordeum vulgare seedl... 436 e-121
gb|AJ460382.1|AJ460382 AJ460382 S00002 Hordeum vulgare subs... 436 e-121
gb|BQ460332.1|BQ460332 HA06I23r HA Hordeum vulgare subsp. v... 436 e-121
gb|BQ657133.1|BQ657133 HA09I10u HA Hordeum vulgare subsp. v... 436 e-121
gb|BM377568.2|BM377568 EBem04_SQ003_I13_R embryo, 12 DPA, n... 436 e-121
gb|BM376611.2|BM376611 EBem05_SQ002_L09_R embryo, 14 DPA, n... 436 e-121
gb|BI780084.2|BI780084 EBma08_SQ001_F19_R maternal, 28 DPA,... 436 e-121
gb|BM101137.2|BM101137 EBpi01_SQ002_P21_R pistil, 1 DPA, no... 436 e-121
gb|BM370559.2|BM370559 EBro08_SQ004_J13_R root, 3 week, dro... 436 e-121
gb|BQ756834.1|BQ756834 EBem09_SQ003_O10_R embryo, 1 Day ger... 436 e-121
gb|BQ759446.1|BQ759446 EBpi01_SQ004_E14_R pistil, 1 DPA, no... 436 e-121
gb|BQ764353.1|BQ764353 EBan01_SQ005_I17_R anther, yellow st... 436 e-121
gb|BU977241.1|BU977241 HA11B09u HA Hordeum vulgare subsp. v... 436 e-121
gb|CA030768.1|CA030768 HX08B07r HX Hordeum vulgare subsp. v... 436 e-121
gb|CB874514.1|CB874514 HX05H22w HX Hordeum vulgare subsp. v... 436 e-121
gb|CV063549.1|CV063549 BNEL90e7 Barley EST endosperm librar... 436 e-121
gb|CK123864.1|CK123864 BES1824105n20 BES1824 Hordeum vulgar... 436 e-121
gb|BE421867.1|BE421867 HWM015cF.10r ITEC HWM Barley Leaf Li... 434 e-120
gb|BE193624.2|BE193624 HVSMEh0082A09f Hordeum vulgare 5-45 ... 434 e-120
gb|BE196257.2|BE196257 HVSMEh0091M19f Hordeum vulgare 5-45 ... 434 e-120
gb|BE195642.3|BE195642 HVSMEh0090A15f Hordeum vulgare 5-45 ... 434 e-120
gb|AV913899.1|AV913899 AV913899 K. Sato unpublished cDNA li... 434 e-120
gb|AJ460492.1|AJ460492 AJ460492 S00002 Hordeum vulgare subs... 434 e-120
gb|AJ460495.1|AJ460495 AJ460495 S00002 Hordeum vulgare subs... 434 e-120
gb|BJ465123.1|BJ465123 BJ465123 K. Sato unpublished cDNA li... 434 e-120
gb|BQ657240.1|BQ657240 HA09C02u HA Hordeum vulgare subsp. v... 434 e-120
gb|BQ657976.1|BQ657976 HA06D06u HA Hordeum vulgare subsp. v... 434 e-120
gb|BM371259.2|BM371259 EBma08_SQ002_A19_R maternal, 28 DPA,... 434 e-120
gb|BQ767264.1|BQ767264 EBro08_SQ008_M10_R root, 3 week, dro... 434 e-120
gb|BU972772.1|BU972772 HB22K20r BC Hordeum vulgare subsp. v... 434 e-120
gb|BU982565.1|BU982565 HA26O23r HA Hordeum vulgare subsp. v... 434 e-120
gb|BU983927.1|BU983927 HA31H16r HA Hordeum vulgare subsp. v... 434 e-120
gb|BU989679.1|BU989679 HF22G11r HF Hordeum vulgare subsp. v... 434 e-120
gb|BU994577.1|BU994577 HM07I06r HM Hordeum vulgare subsp. v... 434 e-120
gb|CA008553.1|CA008553 HU11F06r HU Hordeum vulgare subsp. v... 434 e-120
gb|CA011664.1|CA011664 HT03D07r HT Hordeum vulgare subsp. v... 434 e-120
gb|CA017707.1|CA017707 HV05P22r HV Hordeum vulgare subsp. v... 434 e-120
gb|CA026267.1|CA026267 HZ55G16r HZ Hordeum vulgare subsp. v... 434 e-120
gb|CB883479.1|CB883479 HQ02G05w HQ Hordeum vulgare subsp. v... 434 e-120
gb|CK124268.1|CK124268 BES1824108c13 BES1824 Hordeum vulgar... 434 e-120
gb|BU982731.1|BU982731 HA27H03r HA Hordeum vulgare subsp. v... 432 e-120
gb|CA029887.1|CA029887 HX05H22r HX Hordeum vulgare subsp. v... 432 e-120
gb|AV915789.1|AV915789 AV915789 K. Sato unpublished cDNA li... 430 e-119
gb|BM368114.2|BM368114 EBed01_SQ002_D13_R endosperm, 6 DPA,... 430 e-119
gb|BQ761233.1|BQ761233 EBro04_SQ004_M16_R root, 3 week, sal... 430 e-119
gb|BQ768753.1|BQ768753 EBro08_SQ012_H13_R root, 3 week, dro... 428 e-118
gb|AW982424.3|AW982424 HVSMEg0003D18f Hordeum vulgare pre-a... 426 e-118
gb|BJ463077.1|BJ463077 BJ463077 K. Sato unpublished cDNA li... 426 e-118
gb|BJ463126.1|BJ463126 BJ463126 K. Sato unpublished cDNA li... 426 e-118
gb|BJ467579.1|BJ467579 BJ467579 K. Sato unpublished cDNA li... 426 e-118
gb|BM377528.2|BM377528 EBem04_SQ003_G14_R embryo, 12 DPA, n... 426 e-118
gb|BM377218.2|BM377218 EBem05_SQ004_H13_R embryo, 14 DPA, n... 426 e-118
gb|AJ460496.1|AJ460496 AJ460496 S00002 Hordeum vulgare subs... 424 e-117
gb|BE420961.1|BE420961 HWM004.D02 ITEC HWM Barley Leaf Libr... 422 e-117
gb|BG368111.2|BG368111 HVSMEi0015L14f Hordeum vulgare 20 DA... 420 e-116
gb|BJ468272.1|BJ468272 BJ468272 K. Sato unpublished cDNA li... 420 e-116
gb|BQ759429.1|BQ759429 EBpi01_SQ004_B15_R pistil, 1 DPA, no... 420 e-116
gb|CK125878.1|CK125878 BES1824111A1h09 BES1824 Hordeum vulg... 420 e-116
gb|BM100980.2|BM100980 EBpi01_SQ002_H24_R pistil, 1 DPA, no... 418 e-115
gb|BU980099.1|BU980099 HA18J12r HA Hordeum vulgare subsp. v... 418 e-115
gb|CK125896.1|CK125896 BES1824111B1e11 BES1824 Hordeum vulg... 418 e-115
gb|BM375212.2|BM375212 EBem06_SQ002_L01_R embryo, 21 DPA, n... 416 e-115
gb|BU974599.1|BU974599 HB28H15r BC Hordeum vulgare subsp. v... 416 e-115
gb|BU996456.1|BU996456 HM13K19r HM Hordeum vulgare subsp. v... 416 e-115
gb|AL505608.1|AL505608 AL505608 Hordeum vulgare Barke roots... 414 e-114
gb|BM372616.2|BM372616 EBpi05_SQ003_H10_R pistil, 8 DPA, no... 412 e-114
gb|BM097808.2|BM097808 EBem04_SQ002_M06_R embryo, 12 DPA, n... 410 e-113
gb|AW982785.3|AW982785 HVSMEg0004D09f Hordeum vulgare pre-a... 408 e-112
gb|BU998238.1|BU998238 HI10G19r HI Hordeum vulgare subsp. v... 404 e-111
gb|BF622414.3|BF622414 HVSMEa0004C23f Hordeum vulgare seedl... 402 e-111
gb|BM369172.2|BM369172 EBem07_SQ002_M12_R embryo, 28 DPA, n... 402 e-111
gb|BJ464005.1|BJ464005 BJ464005 K. Sato unpublished cDNA li... 400 e-110
gb|AL507449.1|AL507449 AL507449 Hordeum vulgare Barke devel... 396 e-109
gb|AV921513.1|AV921513 AV921513 K. Sato unpublished cDNA li... 394 e-108
gb|BQ665383.1|BQ665383 HX03F15u HX Hordeum vulgare subsp. v... 394 e-108
gb|BM096579.2|BM096579 EBma05_SQ001_M21_R maternal, 12 DPA,... 392 e-108
gb|BF254111.2|BF254111 HVSMEf0003A21f Hordeum vulgare seedl... 391 e-107
gb|BM376688.2|BM376688 EBem05_SQ002_O24_R embryo, 14 DPA, n... 391 e-107
gb|BM443909.2|BM443909 EBem09_SQ002_A06_R embryo, 1 Day ger... 391 e-107
gb|BQ754361.1|BQ754361 EBca01_SQ003_L10_R carpel, pre-anthe... 389 e-106
gb|BF628987.3|BF628987 HVSMEb0009H03f Hordeum vulgare seedl... 387 e-106
gb|AJ460493.1|AJ460493 AJ460493 S00002 Hordeum vulgare subs... 387 e-106
gb|BM374957.1|BM374957 EBma05_SQ003_M17_R maternal, 12 DPA,... 385 e-105
gb|BI780475.2|BI780475 EBem08_SQ001_F11_R embryo, 40 DPA, n... 385 e-105
gb|BI777120.2|BI777120 EBro03_SQ002_A15_R root, 3 week, wat... 385 e-105
gb|BU980000.1|BU980000 HA18C20r HA Hordeum vulgare subsp. v... 383 e-105
gb|CA004189.1|CA004189 HS16N13r HS Hordeum vulgare subsp. v... 383 e-105
gb|BQ459994.1|BQ459994 HA07I10r HA Hordeum vulgare subsp. v... 381 e-104
gb|BQ657658.1|BQ657658 HA07I10u HA Hordeum vulgare subsp. v... 381 e-104
gb|BM370293.2|BM370293 EBro08_SQ003_L24_R root, 3 week, dro... 375 e-102
gb|BU989673.1|BU989673 HF22G05r HF Hordeum vulgare subsp. v... 375 e-102
gb|CA005304.1|CA005304 HU11C14u HU Hordeum vulgare subsp. v... 375 e-102
gb|CA008499.1|CA008499 HU11C14r HU Hordeum vulgare subsp. v... 375 e-102
gb|CB875344.1|CB875344 HX08A07w HX Hordeum vulgare subsp. v... 375 e-102
gb|BI948923.1|BI948923 HVSMEl0011H19f Hordeum vulgare spike... 367 e-100
gb|BF266984.3|BF266984 HV_CEa0016J21f Hordeum vulgare seedl... 367 e-100
gb|CB859428.1|CB859428 HI10G19w HI Hordeum vulgare subsp. v... 365 1e-099
gb|AL502869.1|AL502869 AL502869 Hordeum vulgare Barke roots... 361 2e-098
gb|AJ460383.1|AJ460383 AJ460383 S00002 Hordeum vulgare subs... 359 9e-098
gb|BU985219.1|BU985219 HF06H23r HF Hordeum vulgare subsp. v... 359 9e-098
gb|CA016875.1|CA016875 HV05P22u HV Hordeum vulgare subsp. v... 359 9e-098
gb|CB880518.1|CB880518 HM06M18w HM Hordeum vulgare subsp. v... 357 4e-097
gb|BQ754589.1|BQ754589 EBed01_SQ003_D22_R endosperm, 6 DPA,... 355 1e-096
gb|BI777012.2|BI777012 EBpi03_SQ001_K10_R pistil, 4 DPA, no... 353 6e-096
gb|CA005252.1|CA005252 HU11F06u HU Hordeum vulgare subsp. v... 353 6e-096
gb|BI778891.2|BI778891 EBro01_SQ001_O16_R root, 3 week, hyd... 349 9e-095
gb|BU983425.1|BU983425 HA29L04r HA Hordeum vulgare subsp. v... 347 3e-094
gb|BJ464965.1|BJ464965 BJ464965 K. Sato unpublished cDNA li... 341 2e-092
gb|BU970541.1|BU970541 HB14P08r BC Hordeum vulgare subsp. v... 341 2e-092
gb|BQ463146.1|BQ463146 HI04D05r HI Hordeum vulgare subsp. v... 335 1e-090
gb|BI779727.2|BI779727 EBem05_SQ001_F08_R embryo, 14 DPA, n... 331 2e-089
gb|AJ460380.1|AJ460380 AJ460380 S00002 Hordeum vulgare subs... 323 5e-087
gb|BI777222.2|BI777222 EBro03_SQ002_H17_R root, 3 week, wat... 307 3e-082
gb|AV920902.1|AV920902 AV920902 K. Sato unpublished cDNA li... 301 2e-080
gb|BI779133.2|BI779133 EBro01_SQ003_B18_R root, 3 week, hyd... 293 5e-078
gb|BQ757335.1|BQ757335 EBem10_SQ003_M04_R embryo, 2 Day ger... 289 7e-077
gb|AL510695.1|AL510695 AL510695 Hordeum vulgare Barke devel... 287 3e-076
gb|BU974518.1|BU974518 HB28C21r BC Hordeum vulgare subsp. v... 285 1e-075
gb|BG414864.2|BG414864 HVSMEk0004A06f Hordeum vulgare testa... 280 7e-074
gb|BJ466271.1|BJ466271 BJ466271 K. Sato unpublished cDNA li... 280 7e-074
gb|CA027160.1|CA027160 HZ58B05r HZ Hordeum vulgare subsp. v... 266 1e-069
gb|BG416139.2|BG416139 HVSMEk0009O18f Hordeum vulgare testa... 264 4e-069
gb|BQ469967.1|BQ469967 HX01G04T HX Hordeum vulgare subsp. v... 244 4e-063
gb|BU999904.1|BU999904 HS16N13u HS Hordeum vulgare subsp. v... 238 2e-061
gb|BQ664914.1|BQ664914 HX01G04w HX Hordeum vulgare subsp. v... 232 1e-059
gb|BM444780.1|BM444780 EBem09_SQ006_H06_R embryo, 1 Day ger... 222 1e-056
gb|AJ460381.1|AJ460381 AJ460381 S00002 Hordeum vulgare subs... 222 1e-056
gb|CK123629.1|CK123629 BES1824104m06 BES1824 Hordeum vulgar... 212 1e-053
gb|BQ764041.1|BQ764041 EBro03_SQ006_I05_R root, 3 week, wat... 206 8e-052
gb|CK123577.1|CK123577 BES1824104i09 BES1824 Hordeum vulgar... 200 5e-050
gb|BU967526.1|BU967526 HB04J10r BC Hordeum vulgare subsp. v... 198 2e-049
gb|AV914889.1|AV914889 AV914889 K. Sato unpublished cDNA li... 194 3e-048
gb|AJ460539.1|AJ460539 AJ460539 S00002 Hordeum vulgare subs... 194 3e-048
gb|AJ460494.1|AJ460494 AJ460494 S00002 Hordeum vulgare subs... 182 1e-044
gb|BM377344.1|BM377344 EBem05_SQ004_N13_R embryo, 14 DPA, n... 168 2e-040
gb|BM441401.2|BM441401 EBma05_SQ004_C12_R maternal, 12 DPA,... 167 7e-040
gb|BU979540.1|BU979540 HA16H20r HA Hordeum vulgare subsp. v... 163 1e-038
gb|BU981882.1|BU981882 HA24O13r HA Hordeum vulgare subsp. v... 161 4e-038
gb|BQ756935.1|BQ756935 EBem10_SQ002_D23_R embryo, 2 Day ger... 151 4e-035
gb|AJ460538.1|AJ460538 AJ460538 S00002 Hordeum vulgare subs... 149 2e-034
gb|BQ755962.1|BQ755962 EBem04_SQ004_F16_R embryo, 12 DPA, n... 133 1e-029
gb|BE215251.1|BE215251 HV_CEb0006E14f Hordeum vulgare seedl... 123 9e-027
gb|BM368821.1|BM368821 EBem08_SQ004_L05_R embryo, 40 DPA, n... 123 9e-027
gb|BM374355.1|BM374355 EBpi03_SQ003_G09_R pistil, 4 DPA, no... 119 1e-025
gb|BU983580.1|BU983580 HA30D08r HA Hordeum vulgare subsp. v... 119 1e-025
gb|BU980349.1|BU980349 HA20H05r HA Hordeum vulgare subsp. v... 115 2e-024
gb|BQ761804.1|BQ761804 EBem10_SQ001_M23_R embryo, 2 Day ger... 88 5e-016
gb|BU967996.1|BU967996 HB06A09r BC Hordeum vulgare subsp. v... 88 5e-016
gb|AV833590.1|AV833590 AV833590 K. Sato unpublished cDNA li... 48 4e-004
gb|BQ755030.1|BQ755030 EBed02_SQ003_I07_R endosperm, 8 DPA,... 44 0.007
gb|BG369497.1|BG369497 HVSMEi0024K11f Hordeum vulgare 20 DA... 40 0.11
gb|BF267473.2|BF267473 HV_CEa0018A19f Hordeum vulgare seedl... 40 0.11
gb|CA012931.1|CA012931 HT06O04r HT Hordeum vulgare subsp. v... 40 0.11
gb|CA018510.1|CA018510 HV08N12r HV Hordeum vulgare subsp. v... 40 0.11
gb|BQ466704.1|BQ466704 HS01F03T HS Hordeum vulgare subsp. v... 38 0.43
gb|BQ467020.1|BQ467020 HS02F03r HS Hordeum vulgare subsp. v... 38 0.43
gb|BM369793.2|BM369793 EBem07_SQ004_K03_R embryo, 28 DPA, n... 38 0.43
gb|BQ755140.1|BQ755140 EBed02_SQ003_N11_R endosperm, 8 DPA,... 38 0.43
gb|BU976272.1|BU976272 HA03G24r HA Hordeum vulgare subsp. v... 38 0.43
gb|BU984806.1|BU984806 HF05B21r HF Hordeum vulgare subsp. v... 38 0.43
gb|CV061707.1|CV061707 BNEL71a11 Barley EST endosperm libra... 38 0.43
>gb|BM816732.1|BM816732 HB02C05_T3.ab1 HB Hordeum vulgare subsp. vulgare cDNA clone
HB02C05_T3.ab1 similar to (AC007109) 60S ribosomal
protein L14 [Arabidopsis thaliana], mRNA sequence
Length = 817
Score = 442 bits (223), Expect = e-123
Identities = 349/391 (89%)
Strand = Plus / Plus
Query: 95 atgccgttcaagaggttcgtggagatcgggcgcgtggcccttgtgaactacggcaaagac 154
|||||||||||||||||||| ||||||||||| |||||||| |||||||||||||| |||
Sbjct: 42 atgccgttcaagaggttcgtcgagatcgggcgggtggccctggtgaactacggcaaggac 101
Query: 155 tacggccgcctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgcc 214
|||||||||||||||||||||||||| || |||||||||||| ||||||| || |||||
Sbjct: 102 tacggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaaccgggcactcgtcgacgct 161
Query: 215 cctgatatggtcaggtgccagattaacttcaaacggctctcacttaccgacatcaagatt 274
||||||||| ||||||||||||| |||||||| || || ||||| |||||||||||||||
Sbjct: 162 cctgatatgatcaggtgccagatgaacttcaagcgtctttcactgaccgacatcaagatt 221
Query: 275 gacatcaaacgtgtccccaagaagtcaaccttgatcaaggctatggaggaagctgatgtg 334
|||||||| ||| ||||||| ||| |||| ||||||||||| ||||||||||||||||||
Sbjct: 222 gacatcaagcgtatccccaaaaaggcaactttgatcaaggccatggaggaagctgatgtg 281
Query: 335 aagactaagtgggagaacagctcatggggcaagaagctgattgtccagaagaggagggct 394
|| || || |||||||||||||| |||||||||||||| ||||| |||||||| || ||
Sbjct: 282 aaaaccaaatgggagaacagctcctggggcaagaagcttattgttcagaagagaagagca 341
Query: 395 gcactcagtgactttgacaggttcaaggtcatgctggcaaggatcaagaggggtggtgct 454
| || | ||||||||||||||||||||||||| |||| | ||| |||||||||||||||
Sbjct: 342 tcgctgaatgactttgacaggttcaaggtcatgttggctaagattaagaggggtggtgct 401
Query: 455 atcaggcaagagctctccaagctgaagaagg 485
|||||||||||||| ||||||| |||||||
Sbjct: 402 atcaggcaagagcttgccaagctcaagaagg 432
>gb|BM377475.2|BM377475 EBem04_SQ003_D24_R embryo, 12 DPA, no treatment, cv Optic, EBem04
Hordeum vulgare subsp. vulgare cDNA clone
EBem04_SQ003_D24 5', mRNA sequence
Length = 549
Score = 442 bits (223), Expect = e-123
Identities = 349/391 (89%)
Strand = Plus / Plus
Query: 95 atgccgttcaagaggttcgtggagatcgggcgcgtggcccttgtgaactacggcaaagac 154
|||||||||||||||||||| ||||||||||| |||||||| |||||||||||||| |||
Sbjct: 53 atgccgttcaagaggttcgtcgagatcgggcgggtggccctggtgaactacggcaaggac 112
Query: 155 tacggccgcctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgcc 214
|||||||||||||||||||||||||| || |||||||||||| ||||||| || |||||
Sbjct: 113 tacggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaaccgggcactcgtcgacgct 172
Query: 215 cctgatatggtcaggtgccagattaacttcaaacggctctcacttaccgacatcaagatt 274
||||||||| ||||||||||||| |||||||| || || ||||| |||||||||||||||
Sbjct: 173 cctgatatgatcaggtgccagatgaacttcaagcgtctttcactgaccgacatcaagatt 232
Query: 275 gacatcaaacgtgtccccaagaagtcaaccttgatcaaggctatggaggaagctgatgtg 334
|||||||| ||| ||||||| ||| |||| ||||||||||| ||||||||||||||||||
Sbjct: 233 gacatcaagcgtatccccaaaaaggcaactttgatcaaggccatggaggaagctgatgtg 292
Query: 335 aagactaagtgggagaacagctcatggggcaagaagctgattgtccagaagaggagggct 394
|| || || |||||||||||||| |||||||||||||| ||||| |||||||| || ||
Sbjct: 293 aaaaccaaatgggagaacagctcctggggcaagaagcttattgttcagaagagaagagca 352
Query: 395 gcactcagtgactttgacaggttcaaggtcatgctggcaaggatcaagaggggtggtgct 454
| || | ||||||||||||||||||||||||| |||| | ||| |||||||||||||||
Sbjct: 353 tcgctgaatgactttgacaggttcaaggtcatgttggctaagattaagaggggtggtgct 412
Query: 455 atcaggcaagagctctccaagctgaagaagg 485
|||||||||||||| ||||||| |||||||
Sbjct: 413 atcaggcaagagcttgccaagctcaagaagg 443
>gb|BM377699.2|BM377699 EBem04_SQ003_O16_R embryo, 12 DPA, no treatment, cv Optic, EBem04
Hordeum vulgare subsp. vulgare cDNA clone
EBem04_SQ003_O16 5', mRNA sequence
Length = 602
Score = 442 bits (223), Expect = e-123
Identities = 349/391 (89%)
Strand = Plus / Plus
Query: 95 atgccgttcaagaggttcgtggagatcgggcgcgtggcccttgtgaactacggcaaagac 154
|||||||||||||||||||| ||||||||||| |||||||| |||||||||||||| |||
Sbjct: 43 atgccgttcaagaggttcgtcgagatcgggcgggtggccctggtgaactacggcaaggac 102
Query: 155 tacggccgcctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgcc 214
|||||||||||||||||||||||||| || |||||||||||| ||||||| || |||||
Sbjct: 103 tacggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaaccgggcactcgtcgacgct 162
Query: 215 cctgatatggtcaggtgccagattaacttcaaacggctctcacttaccgacatcaagatt 274
||||||||| ||||||||||||| |||||||| || || ||||| |||||||||||||||
Sbjct: 163 cctgatatgatcaggtgccagatgaacttcaagcgtctttcactgaccgacatcaagatt 222
Query: 275 gacatcaaacgtgtccccaagaagtcaaccttgatcaaggctatggaggaagctgatgtg 334
|||||||| ||| ||||||| ||| |||| ||||||||||| ||||||||||||||||||
Sbjct: 223 gacatcaagcgtatccccaaaaaggcaactttgatcaaggccatggaggaagctgatgtg 282
Query: 335 aagactaagtgggagaacagctcatggggcaagaagctgattgtccagaagaggagggct 394
|| || || |||||||||||||| |||||||||||||| ||||| |||||||| || ||
Sbjct: 283 aaaaccaaatgggagaacagctcctggggcaagaagcttattgttcagaagagaagagca 342
Query: 395 gcactcagtgactttgacaggttcaaggtcatgctggcaaggatcaagaggggtggtgct 454
| || | ||||||||||||||||||||||||| |||| | ||| |||||||||||||||
Sbjct: 343 tcgctgaatgactttgacaggttcaaggtcatgttggctaagattaagaggggtggtgct 402
Query: 455 atcaggcaagagctctccaagctgaagaagg 485
|||||||||||||| ||||||| |||||||
Sbjct: 403 atcaggcaagagcttgccaagctcaagaagg 433
>gb|BI780787.2|BI780787 EBes01_SQ002_D08_R embryo sac, 4-6 DPA, no treatment, cv Optic,
EBes01 Hordeum vulgare subsp. vulgare cDNA clone
EBes01_SQ002_D08 5', mRNA sequence
Length = 618
Score = 442 bits (223), Expect = e-123
Identities = 349/391 (89%)
Strand = Plus / Plus
Query: 95 atgccgttcaagaggttcgtggagatcgggcgcgtggcccttgtgaactacggcaaagac 154
|||||||||||||||||||| ||||||||||| |||||||| |||||||||||||| |||
Sbjct: 50 atgccgttcaagaggttcgtcgagatcgggcgggtggccctggtgaactacggcaaggac 109
Query: 155 tacggccgcctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgcc 214
|||||||||||||||||||||||||| || |||||||||||| ||||||| || |||||
Sbjct: 110 tacggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaaccgggcactcgtcgacgct 169
Query: 215 cctgatatggtcaggtgccagattaacttcaaacggctctcacttaccgacatcaagatt 274
||||||||| ||||||||||||| |||||||| || || ||||| |||||||||||||||
Sbjct: 170 cctgatatgatcaggtgccagatgaacttcaagcgtctttcactgaccgacatcaagatt 229
Query: 275 gacatcaaacgtgtccccaagaagtcaaccttgatcaaggctatggaggaagctgatgtg 334
|||||||| ||| ||||||| ||| |||| ||||||||||| ||||||||||||||||||
Sbjct: 230 gacatcaagcgtatccccaaaaaggcaactttgatcaaggccatggaggaagctgatgtg 289
Query: 335 aagactaagtgggagaacagctcatggggcaagaagctgattgtccagaagaggagggct 394
|| || || |||||||||||||| |||||||||||||| ||||| |||||||| || ||
Sbjct: 290 aaaaccaaatgggagaacagctcctggggcaagaagcttattgttcagaagagaagagca 349
Query: 395 gcactcagtgactttgacaggttcaaggtcatgctggcaaggatcaagaggggtggtgct 454
| || | ||||||||||||||||||||||||| |||| | ||| |||||||||||||||
Sbjct: 350 tcgctgaatgactttgacaggttcaaggtcatgttggctaagattaagaggggtggtgct 409
Query: 455 atcaggcaagagctctccaagctgaagaagg 485
|||||||||||||| ||||||| |||||||
Sbjct: 410 atcaggcaagagcttgccaagctcaagaagg 440
>gb|BM101365.2|BM101365 EBpi01_SQ003_K07_R pistil, 1 DPA, no treatment, cv Optic, EBpi01
Hordeum vulgare subsp. vulgare cDNA clone
EBpi01_SQ003_K07 5', mRNA sequence
Length = 584
Score = 442 bits (223), Expect = e-123
Identities = 349/391 (89%)
Strand = Plus / Plus
Query: 95 atgccgttcaagaggttcgtggagatcgggcgcgtggcccttgtgaactacggcaaagac 154
|||||||||||||||||||| ||||||||||| |||||||| |||||||||||||| |||
Sbjct: 49 atgccgttcaagaggttcgtcgagatcgggcgggtggccctggtgaactacggcaaggac 108
Query: 155 tacggccgcctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgcc 214
|||||||||||||||||||||||||| || |||||||||||| ||||||| || |||||
Sbjct: 109 tacggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaaccgggcactcgtcgacgct 168
Query: 215 cctgatatggtcaggtgccagattaacttcaaacggctctcacttaccgacatcaagatt 274
||||||||| ||||||||||||| |||||||| || || ||||| |||||||||||||||
Sbjct: 169 cctgatatgatcaggtgccagatgaacttcaagcgtctttcactgaccgacatcaagatt 228
Query: 275 gacatcaaacgtgtccccaagaagtcaaccttgatcaaggctatggaggaagctgatgtg 334
|||||||| ||| ||||||| ||| |||| ||||||||||| ||||||||||||||||||
Sbjct: 229 gacatcaagcgtatccccaaaaaggcaactttgatcaaggccatggaggaagctgatgtg 288
Query: 335 aagactaagtgggagaacagctcatggggcaagaagctgattgtccagaagaggagggct 394
|| || || |||||||||||||| |||||||||||||| ||||| |||||||| || ||
Sbjct: 289 aaaaccaaatgggagaacagctcctggggcaagaagcttattgttcagaagagaagagca 348
Query: 395 gcactcagtgactttgacaggttcaaggtcatgctggcaaggatcaagaggggtggtgct 454
| || | ||||||||||||||||||||||||| |||| | ||| |||||||||||||||
Sbjct: 349 tcgctgaatgactttgacaggttcaaggtcatgttggctaagattaagaggggtggtgct 408
Query: 455 atcaggcaagagctctccaagctgaagaagg 485
|||||||||||||| ||||||| |||||||
Sbjct: 409 atcaggcaagagcttgccaagctcaagaagg 439
>gb|BM370305.2|BM370305 EBro08_SQ003_M14_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ003_M14 5', mRNA sequence
Length = 679
Score = 442 bits (223), Expect = e-123
Identities = 349/391 (89%)
Strand = Plus / Plus
Query: 95 atgccgttcaagaggttcgtggagatcgggcgcgtggcccttgtgaactacggcaaagac 154
|||||||||||||||||||| ||||||||||| |||||||| |||||||||||||| |||
Sbjct: 55 atgccgttcaagaggttcgtcgagatcgggcgggtggccctggtgaactacggcaaggac 114
Query: 155 tacggccgcctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgcc 214
|||||||||||||||||||||||||| || |||||||||||| ||||||| || |||||
Sbjct: 115 tacggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaaccgggcactcgtcgacgct 174
Query: 215 cctgatatggtcaggtgccagattaacttcaaacggctctcacttaccgacatcaagatt 274
||||||||| ||||||||||||| |||||||| || || ||||| |||||||||||||||
Sbjct: 175 cctgatatgatcaggtgccagatgaacttcaagcgtctttcactgaccgacatcaagatt 234
Query: 275 gacatcaaacgtgtccccaagaagtcaaccttgatcaaggctatggaggaagctgatgtg 334
|||||||| ||| ||||||| ||| |||| ||||||||||| ||||||||||||||||||
Sbjct: 235 gacatcaagcgtatccccaaaaaggcaactttgatcaaggccatggaggaagctgatgtg 294
Query: 335 aagactaagtgggagaacagctcatggggcaagaagctgattgtccagaagaggagggct 394
|| || || |||||||||||||| |||||||||||||| ||||| |||||||| || ||
Sbjct: 295 aaaaccaaatgggagaacagctcctggggcaagaagcttattgttcagaagagaagagca 354
Query: 395 gcactcagtgactttgacaggttcaaggtcatgctggcaaggatcaagaggggtggtgct 454
| || | ||||||||||||||||||||||||| |||| | ||| |||||||||||||||
Sbjct: 355 tcgctgaatgactttgacaggttcaaggtcatgttggctaagattaagaggggtggtgct 414
Query: 455 atcaggcaagagctctccaagctgaagaagg 485
|||||||||||||| ||||||| |||||||
Sbjct: 415 atcaggcaagagcttgccaagctcaagaagg 445
>gb|BQ758693.1|BQ758693 EBma07_SQ002_E13_R maternal, 21 DPA, no treatment, cv Optic, EBma07
Hordeum vulgare subsp. vulgare cDNA clone
EBma07_SQ002_E13 5', mRNA sequence
Length = 576
Score = 442 bits (223), Expect = e-123
Identities = 349/391 (89%)
Strand = Plus / Plus
Query: 95 atgccgttcaagaggttcgtggagatcgggcgcgtggcccttgtgaactacggcaaagac 154
|||||||||||||||||||| ||||||||||| |||||||| |||||||||||||| |||
Sbjct: 48 atgccgttcaagaggttcgtcgagatcgggcgggtggccctggtgaactacggcaaggac 107
Query: 155 tacggccgcctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgcc 214
|||||||||||||||||||||||||| || |||||||||||| ||||||| || |||||
Sbjct: 108 tacggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaaccgggcactcgtcgacgct 167
Query: 215 cctgatatggtcaggtgccagattaacttcaaacggctctcacttaccgacatcaagatt 274
||||||||| ||||||||||||| |||||||| || || ||||| |||||||||||||||
Sbjct: 168 cctgatatgatcaggtgccagatgaacttcaagcgtctttcactgaccgacatcaagatt 227
Query: 275 gacatcaaacgtgtccccaagaagtcaaccttgatcaaggctatggaggaagctgatgtg 334
|||||||| ||| ||||||| ||| |||| ||||||||||| ||||||||||||||||||
Sbjct: 228 gacatcaagcgtatccccaaaaaggcaactttgatcaaggccatggaggaagctgatgtg 287
Query: 335 aagactaagtgggagaacagctcatggggcaagaagctgattgtccagaagaggagggct 394
|| || || |||||||||||||| |||||||||||||| ||||| |||||||| || ||
Sbjct: 288 aaaaccaaatgggagaacagctcctggggcaagaagcttattgttcagaagagaagagca 347
Query: 395 gcactcagtgactttgacaggttcaaggtcatgctggcaaggatcaagaggggtggtgct 454
| || | ||||||||||||||||||||||||| |||| | ||| |||||||||||||||
Sbjct: 348 tcgctgaatgactttgacaggttcaaggtcatgttggctaagattaagaggggtggtgct 407
Query: 455 atcaggcaagagctctccaagctgaagaagg 485
|||||||||||||| ||||||| |||||||
Sbjct: 408 atcaggcaagagcttgccaagctcaagaagg 438
>gb|BQ762662.1|BQ762662 EBro02_SQ004_L15_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ004_L15 5', mRNA sequence
Length = 621
Score = 442 bits (223), Expect = e-123
Identities = 349/391 (89%)
Strand = Plus / Plus
Query: 95 atgccgttcaagaggttcgtggagatcgggcgcgtggcccttgtgaactacggcaaagac 154
|||||||||||||||||||| ||||||||||| |||||||| |||||||||||||| |||
Sbjct: 52 atgccgttcaagaggttcgtcgagatcgggcgggtggccctggtgaactacggcaaggac 111
Query: 155 tacggccgcctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgcc 214
|||||||||||||||||||||||||| || |||||||||||| ||||||| || |||||
Sbjct: 112 tacggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaaccgggcactcgtcgacgct 171
Query: 215 cctgatatggtcaggtgccagattaacttcaaacggctctcacttaccgacatcaagatt 274
||||||||| ||||||||||||| |||||||| || || ||||| |||||||||||||||
Sbjct: 172 cctgatatgatcaggtgccagatgaacttcaagcgtctttcactgaccgacatcaagatt 231
Query: 275 gacatcaaacgtgtccccaagaagtcaaccttgatcaaggctatggaggaagctgatgtg 334
|||||||| ||| ||||||| ||| |||| ||||||||||| ||||||||||||||||||
Sbjct: 232 gacatcaagcgtatccccaaaaaggcaactttgatcaaggccatggaggaagctgatgtg 291
Query: 335 aagactaagtgggagaacagctcatggggcaagaagctgattgtccagaagaggagggct 394
|| || || |||||||||||||| |||||||||||||| ||||| |||||||| || ||
Sbjct: 292 aaaaccaaatgggagaacagctcctggggcaagaagcttattgttcagaagagaagagca 351
Query: 395 gcactcagtgactttgacaggttcaaggtcatgctggcaaggatcaagaggggtggtgct 454
| || | ||||||||||||||||||||||||| |||| | ||| |||||||||||||||
Sbjct: 352 tcgctgaatgactttgacaggttcaaggtcatgttggctaagattaagaggggtggtgct 411
Query: 455 atcaggcaagagctctccaagctgaagaagg 485
|||||||||||||| ||||||| |||||||
Sbjct: 412 atcaggcaagagcttgccaagctcaagaagg 442
>gb|BQ764226.1|BQ764226 EBan01_SQ005_A12_R anther, yellow stage, no treatment, cv Optic,
EBan01 Hordeum vulgare subsp. vulgare cDNA clone
EBan01_SQ005_A12 5', mRNA sequence
Length = 620
Score = 442 bits (223), Expect = e-123
Identities = 349/391 (89%)
Strand = Plus / Plus
Query: 95 atgccgttcaagaggttcgtggagatcgggcgcgtggcccttgtgaactacggcaaagac 154
|||||||||||||||||||| ||||||||||| |||||||| |||||||||||||| |||
Sbjct: 48 atgccgttcaagaggttcgtcgagatcgggcgggtggccctggtgaactacggcaaggac 107
Query: 155 tacggccgcctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgcc 214
|||||||||||||||||||||||||| || |||||||||||| ||||||| || |||||
Sbjct: 108 tacggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaaccgggcactcgtcgacgct 167
Query: 215 cctgatatggtcaggtgccagattaacttcaaacggctctcacttaccgacatcaagatt 274
||||||||| ||||||||||||| |||||||| || || ||||| |||||||||||||||
Sbjct: 168 cctgatatgatcaggtgccagatgaacttcaagcgtctttcactgaccgacatcaagatt 227
Query: 275 gacatcaaacgtgtccccaagaagtcaaccttgatcaaggctatggaggaagctgatgtg 334
|||||||| ||| ||||||| ||| |||| ||||||||||| ||||||||||||||||||
Sbjct: 228 gacatcaagcgtatccccaaaaaggcaactttgatcaaggccatggaggaagctgatgtg 287
Query: 335 aagactaagtgggagaacagctcatggggcaagaagctgattgtccagaagaggagggct 394
|| || || |||||||||||||| |||||||||||||| ||||| |||||||| || ||
Sbjct: 288 aaaaccaaatgggagaacagctcctggggcaagaagcttattgttcagaagagaagagca 347
Query: 395 gcactcagtgactttgacaggttcaaggtcatgctggcaaggatcaagaggggtggtgct 454
| || | ||||||||||||||||||||||||| |||| | ||| |||||||||||||||
Sbjct: 348 tcgctgaatgactttgacaggttcaaggtcatgttggctaagattaagaggggtggtgct 407
Query: 455 atcaggcaagagctctccaagctgaagaagg 485
|||||||||||||| ||||||| |||||||
Sbjct: 408 atcaggcaagagcttgccaagctcaagaagg 438
>gb|BQ766935.1|BQ766935 EBro08_SQ007_D15_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ007_D15 5', mRNA sequence
Length = 728
Score = 442 bits (223), Expect = e-123
Identities = 349/391 (89%)
Strand = Plus / Plus
Query: 95 atgccgttcaagaggttcgtggagatcgggcgcgtggcccttgtgaactacggcaaagac 154
|||||||||||||||||||| ||||||||||| |||||||| |||||||||||||| |||
Sbjct: 59 atgccgttcaagaggttcgtcgagatcgggcgggtggccctggtgaactacggcaaggac 118
Query: 155 tacggccgcctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgcc 214
|||||||||||||||||||||||||| || |||||||||||| ||||||| || |||||
Sbjct: 119 tacggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaaccgggcactcgtcgacgct 178
Query: 215 cctgatatggtcaggtgccagattaacttcaaacggctctcacttaccgacatcaagatt 274
||||||||| ||||||||||||| |||||||| || || ||||| |||||||||||||||
Sbjct: 179 cctgatatgatcaggtgccagatgaacttcaagcgtctttcactgaccgacatcaagatt 238
Query: 275 gacatcaaacgtgtccccaagaagtcaaccttgatcaaggctatggaggaagctgatgtg 334
|||||||| ||| ||||||| ||| |||| ||||||||||| ||||||||||||||||||
Sbjct: 239 gacatcaagcgtatccccaaaaaggcaactttgatcaaggccatggaggaagctgatgtg 298
Query: 335 aagactaagtgggagaacagctcatggggcaagaagctgattgtccagaagaggagggct 394
|| || || |||||||||||||| |||||||||||||| ||||| |||||||| || ||
Sbjct: 299 aaaaccaaatgggagaacagctcctggggcaagaagcttattgttcagaagagaagagca 358
Query: 395 gcactcagtgactttgacaggttcaaggtcatgctggcaaggatcaagaggggtggtgct 454
| || | ||||||||||||||||||||||||| |||| | ||| |||||||||||||||
Sbjct: 359 tcgctgaatgactttgacaggttcaaggtcatgttggctaagattaagaggggtggtgct 418
Query: 455 atcaggcaagagctctccaagctgaagaagg 485
|||||||||||||| ||||||| |||||||
Sbjct: 419 atcaggcaagagcttgccaagctcaagaagg 449
>gb|BQ768014.1|BQ768014 EBro08_SQ010_O11_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ010_O11 5', mRNA sequence
Length = 554
Score = 442 bits (223), Expect = e-123
Identities = 349/391 (89%)
Strand = Plus / Plus
Query: 95 atgccgttcaagaggttcgtggagatcgggcgcgtggcccttgtgaactacggcaaagac 154
|||||||||||||||||||| ||||||||||| |||||||| |||||||||||||| |||
Sbjct: 53 atgccgttcaagaggttcgtcgagatcgggcgggtggccctggtgaactacggcaaggac 112
Query: 155 tacggccgcctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgcc 214
|||||||||||||||||||||||||| || |||||||||||| ||||||| || |||||
Sbjct: 113 tacggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaaccgggcactcgtcgacgct 172
Query: 215 cctgatatggtcaggtgccagattaacttcaaacggctctcacttaccgacatcaagatt 274
||||||||| ||||||||||||| |||||||| || || ||||| |||||||||||||||
Sbjct: 173 cctgatatgatcaggtgccagatgaacttcaagcgtctttcactgaccgacatcaagatt 232
Query: 275 gacatcaaacgtgtccccaagaagtcaaccttgatcaaggctatggaggaagctgatgtg 334
|||||||| ||| ||||||| ||| |||| ||||||||||| ||||||||||||||||||
Sbjct: 233 gacatcaagcgtatccccaaaaaggcaactttgatcaaggccatggaggaagctgatgtg 292
Query: 335 aagactaagtgggagaacagctcatggggcaagaagctgattgtccagaagaggagggct 394
|| || || |||||||||||||| |||||||||||||| ||||| |||||||| || ||
Sbjct: 293 aaaaccaaatgggagaacagctcctggggcaagaagcttattgttcagaagagaagagca 352
Query: 395 gcactcagtgactttgacaggttcaaggtcatgctggcaaggatcaagaggggtggtgct 454
| || | ||||||||||||||||||||||||| |||| | ||| |||||||||||||||
Sbjct: 353 tcgctgaatgactttgacaggttcaaggtcatgttggctaagattaagaggggtggtgct 412
Query: 455 atcaggcaagagctctccaagctgaagaagg 485
|||||||||||||| ||||||| |||||||
Sbjct: 413 atcaggcaagagcttgccaagctcaagaagg 443
>gb|BQ470561.1|BQ470561 HX03F15r HX Hordeum vulgare subsp. vulgare cDNA clone HX03F15
5-PRIME, mRNA sequence
Length = 592
Score = 438 bits (221), Expect = e-121
Identities = 349/392 (89%)
Strand = Plus / Plus
Query: 94 aatgccgttcaagaggttcgtggagatcgggcgcgtggcccttgtgaactacggcaaaga 153
|||||||||||||||||| |||||||||||||| |||||||| |||||||||||||| ||
Sbjct: 76 aatgccgttcaagaggtttgtggagatcgggcgggtggccctggtgaactacggcaagga 135
Query: 154 ctacggccgcctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgc 213
||||||||||||||||||||||||||| || ||||||||||||||||||||| | || ||
Sbjct: 136 ctacggccgcctcgtcgtcatcgtcgacgttgtcgaccagaacagggcacttattgatgc 195
Query: 214 ccctgatatggtcaggtgccagattaacttcaaacggctctcacttaccgacatcaagat 273
|| || ||| || | |||||||| |||||||| |||||||| || ||||||||||||||
Sbjct: 196 accggacatgatccgctgccagatgaacttcaagcggctctccctgaccgacatcaagat 255
Query: 274 tgacatcaaacgtgtccccaagaagtcaaccttgatcaaggctatggaggaagctgatgt 333
||||||||| || |||| |||||| |||| ||||||| ||||||||||||||||||||
Sbjct: 256 tgacatcaagcggatccctaagaaggcaactctgatcaaagctatggaggaagctgatgt 315
Query: 334 gaagactaagtgggagaacagctcatggggcaagaagctgattgtccagaagaggagggc 393
|||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 316 gaagaccaagtgggagaacagttcatggggcaagaagctgattgtccagaagaggagggc 375
Query: 394 tgcactcagtgactttgacaggttcaaggtcatgctggcaaggatcaagaggggtggtgc 453
| |||| ||||||||||||||||||||||||||| || || ||||||||||| || ||
Sbjct: 376 atcgctcaatgactttgacaggttcaaggtcatgcttgccagnatcaagaggggaggagc 435
Query: 454 tatcaggcaagagctctccaagctgaagaagg 485
||||||||| ||||| | ||||| |||||||
Sbjct: 436 tatcaggcaggagctagcgaagcttaagaagg 467
>gb|BG344422.1|BG344422 HVSMEg0009D14f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0009D14f, mRNA sequence
Length = 811
Score = 436 bits (220), Expect = e-121
Identities = 349/392 (89%)
Strand = Plus / Plus
Query: 94 aatgccgttcaagaggttcgtggagatcgggcgcgtggcccttgtgaactacggcaaaga 153
|||||||||||||||||| |||||||||||||| |||||||| |||||||||||||| ||
Sbjct: 32 aatgccgttcaagaggtttgtggagatcgggcgggtggccctggtgaactacggcaagga 91
Query: 154 ctacggccgcctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgc 213
||||||||||||||||||||||||||| || ||||||||||||||||||||| | || ||
Sbjct: 92 ctacggccgcctcgtcgtcatcgtcgacgttgtcgaccagaacagggcacttattgatgc 151
Query: 214 ccctgatatggtcaggtgccagattaacttcaaacggctctcacttaccgacatcaagat 273
|| || ||| || | |||||||| |||||||| |||||||| || ||||||||||||||
Sbjct: 152 accggacatgatccgctgccagatgaacttcaagcggctctccctgaccgacatcaagat 211
Query: 274 tgacatcaaacgtgtccccaagaagtcaaccttgatcaaggctatggaggaagctgatgt 333
||||||||| || |||| |||||| |||| ||||||| ||||||||||||||||||||
Sbjct: 212 tgacatcaagcggatccctaagaaggcaactctgatcaaagctatggaggaagctgatgt 271
Query: 334 gaagactaagtgggagaacagctcatggggcaagaagctgattgtccagaagaggagggc 393
|||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 272 gaagaccaagtgggagaacagttcatggggcaagaagctgattgtccagaagaggagggc 331
Query: 394 tgcactcagtgactttgacaggttcaaggtcatgctggcaaggatcaagaggggtggtgc 453
| |||| ||||||||||||||||||||||||||| || | |||||||||||| || ||
Sbjct: 332 atcgctcaatgactttgacaggttcaaggtcatgcttgccaagatcaagaggggaggagc 391
Query: 454 tatcaggcaagagctctccaagctgaagaagg 485
||||||||| ||||| | ||||| |||||||
Sbjct: 392 tatcaggcaggagctagcgaagcttaagaagg 423
>gb|BF263456.3|BF263456 HV_CEa0006M17f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0006M17f, mRNA sequence
Length = 587
Score = 436 bits (220), Expect = e-121
Identities = 349/392 (89%)
Strand = Plus / Plus
Query: 94 aatgccgttcaagaggttcgtggagatcgggcgcgtggcccttgtgaactacggcaaaga 153
|||||||||||||||||| |||||||||||||| |||||||| |||||||||||||| ||
Sbjct: 56 aatgccgttcaagaggtttgtggagatcgggcgggtggccctggtgaactacggcaagga 115
Query: 154 ctacggccgcctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgc 213
||||||||||||||||||||||||||| || ||||||||||||||||||||| | || ||
Sbjct: 116 ctacggccgcctcgtcgtcatcgtcgacgttgtcgaccagaacagggcacttattgatgc 175
Query: 214 ccctgatatggtcaggtgccagattaacttcaaacggctctcacttaccgacatcaagat 273
|| || ||| || | |||||||| |||||||| |||||||| || ||||||||||||||
Sbjct: 176 accggacatgatccgctgccagatgaacttcaagcggctctccctgaccgacatcaagat 235
Query: 274 tgacatcaaacgtgtccccaagaagtcaaccttgatcaaggctatggaggaagctgatgt 333
||||||||| || |||| |||||| |||| ||||||| ||||||||||||||||||||
Sbjct: 236 tgacatcaagcggatccctaagaaggcaactctgatcaaagctatggaggaagctgatgt 295
Query: 334 gaagactaagtgggagaacagctcatggggcaagaagctgattgtccagaagaggagggc 393
|||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 296 gaagaccaagtgggagaacagttcatggggcaagaagctgattgtccagaagaggagggc 355
Query: 394 tgcactcagtgactttgacaggttcaaggtcatgctggcaaggatcaagaggggtggtgc 453
| |||| ||||||||||||||||||||||||||| || | |||||||||||| || ||
Sbjct: 356 atcgctcaatgactttgacaggttcaaggtcatgcttgccaagatcaagaggggaggagc 415
Query: 454 tatcaggcaagagctctccaagctgaagaagg 485
||||||||| ||||| | ||||| |||||||
Sbjct: 416 tatcaggcatgagctagcgaagcttaagaagg 447
>gb|AJ460382.1|AJ460382 AJ460382 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200032B11F1, mRNA sequence
Length = 480
Score = 436 bits (220), Expect = e-121
Identities = 349/392 (89%)
Strand = Plus / Plus
Query: 94 aatgccgttcaagaggttcgtggagatcgggcgcgtggcccttgtgaactacggcaaaga 153
|||||||||||||||||| |||||||||||||| |||||||| |||||||||||||| ||
Sbjct: 23 aatgccgttcaagaggtttgtggagatcgggcgggtggccctggtgaactacggcaagga 82
Query: 154 ctacggccgcctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgc 213
||||||||||||||||||||||||||| || ||||||||||||||||||||| | || ||
Sbjct: 83 ctacggccgcctcgtcgtcatcgtcgacgttgtcgaccagaacagggcacttattgatgc 142
Query: 214 ccctgatatggtcaggtgccagattaacttcaaacggctctcacttaccgacatcaagat 273
|| || ||| || | |||||||| |||||||| |||||||| || ||||||||||||||
Sbjct: 143 accggacatgatccgctgccagatgaacttcaagcggctctccctgaccgacatcaagat 202
Query: 274 tgacatcaaacgtgtccccaagaagtcaaccttgatcaaggctatggaggaagctgatgt 333
||||||||| || |||| |||||| |||| ||||||| ||||||||||||||||||||
Sbjct: 203 tgacatcaagcggatccctaagaaggcaactctgatcaaagctatggaggaagctgatgt 262
Query: 334 gaagactaagtgggagaacagctcatggggcaagaagctgattgtccagaagaggagggc 393
|||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 263 gaagaccaagtgggagaacagttcatggggcaagaagctgattgtccagaagaggagggc 322
Query: 394 tgcactcagtgactttgacaggttcaaggtcatgctggcaaggatcaagaggggtggtgc 453
| |||| ||||||||||||||||||||||||||| || | |||||||||||| || ||
Sbjct: 323 atcgctcaatgactttgacaggttcaaggtcatgcttgccaagatcaagaggggaggagc 382
Query: 454 tatcaggcaagagctctccaagctgaagaagg 485
||||||||| ||||| | ||||| |||||||
Sbjct: 383 tatcaggcaggagctagcgaagcttaagaagg 414
>gb|BQ460332.1|BQ460332 HA06I23r HA Hordeum vulgare subsp. vulgare cDNA clone HA06I23
5-PRIME, mRNA sequence
Length = 615
Score = 436 bits (220), Expect = e-121
Identities = 349/392 (89%)
Strand = Plus / Plus
Query: 94 aatgccgttcaagaggttcgtggagatcgggcgcgtggcccttgtgaactacggcaaaga 153
|||||||||||||||||| |||||||||||||| |||||||| |||||||||||||| ||
Sbjct: 45 aatgccgttcaagaggtttgtggagatcgggcgggtggccctggtgaactacggcaagga 104
Query: 154 ctacggccgcctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgc 213
||||||||||||||||||||||||||| || ||||||||||||||||||||| | || ||
Sbjct: 105 ctacggccgcctcgtcgtcatcgtcgacgttgtcgaccagaacagggcacttattgatgc 164
Query: 214 ccctgatatggtcaggtgccagattaacttcaaacggctctcacttaccgacatcaagat 273
|| || ||| || | |||||||| |||||||| |||||||| || ||||||||||||||
Sbjct: 165 accggacatgatccgctgccagatgaacttcaagcggctctccctgaccgacatcaagat 224
Query: 274 tgacatcaaacgtgtccccaagaagtcaaccttgatcaaggctatggaggaagctgatgt 333
||||||||| || |||| |||||| |||| ||||||| ||||||||||||||||||||
Sbjct: 225 tgacatcaagcggatccctaagaaggcaactctgatcaaagctatggaggaagctgatgt 284
Query: 334 gaagactaagtgggagaacagctcatggggcaagaagctgattgtccagaagaggagggc 393
|||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 285 gaagaccaagtgggagaacagttcatggggcaagaagctgattgtccagaagaggagggc 344
Query: 394 tgcactcagtgactttgacaggttcaaggtcatgctggcaaggatcaagaggggtggtgc 453
| |||| ||||||||||||||||||||||||||| || | |||||||||||| || ||
Sbjct: 345 atcgctcaatgactttgacaggttcaaggtcatgcttgccaagatcaagaggggaggagc 404
Query: 454 tatcaggcaagagctctccaagctgaagaagg 485
||||||||| ||||| | ||||| |||||||
Sbjct: 405 tatcaggcaggagctagcgaagcttaagaagg 436
>gb|BQ657133.1|BQ657133 HA09I10u HA Hordeum vulgare subsp. vulgare cDNA clone HA09I10
3-PRIME, mRNA sequence
Length = 605
Score = 436 bits (220), Expect = e-121
Identities = 349/392 (89%)
Strand = Plus / Plus
Query: 94 aatgccgttcaagaggttcgtggagatcgggcgcgtggcccttgtgaactacggcaaaga 153
|||||||||||||||||| |||||||||||||| |||||||| |||||||||||||| ||
Sbjct: 76 aatgccgttcaagaggtttgtggagatcgggcgggtggccctggtgaactacggcaagga 135
Query: 154 ctacggccgcctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgc 213
||||||||||||||||||||||||||| || ||||||||||||||||||||| | || ||
Sbjct: 136 ctacggccgcctcgtcgtcatcgtcgacgttgtcgaccagaacagggcacttattgatgc 195
Query: 214 ccctgatatggtcaggtgccagattaacttcaaacggctctcacttaccgacatcaagat 273
|| || ||| || | |||||||| |||||||| |||||||| || ||||||||||||||
Sbjct: 196 accggacatgatccgctgccagatgaacttcaagcggctctccctgaccgacatcaagat 255
Query: 274 tgacatcaaacgtgtccccaagaagtcaaccttgatcaaggctatggaggaagctgatgt 333
||||||||| || |||| |||||| |||| ||||||| ||||||||||||||||||||
Sbjct: 256 tgacatcaagcggatccctaagaaggcaactctgatcaaagctatggaggaagctgatgt 315
Query: 334 gaagactaagtgggagaacagctcatggggcaagaagctgattgtccagaagaggagggc 393
|||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 316 gaagaccaagtgggagaacagttcatggggcaagaagctgattgtccagaagaggagggc 375
Query: 394 tgcactcagtgactttgacaggttcaaggtcatgctggcaaggatcaagaggggtggtgc 453
| |||| ||||||||||||||||||||||||||| || | |||||||||||| || ||
Sbjct: 376 atcgctcaatgactttgacaggttcaaggtcatgcttgccaagatcaagaggggaggagc 435
Query: 454 tatcaggcaagagctctccaagctgaagaagg 485
||||||||| ||||| | ||||| |||||||
Sbjct: 436 tatcaggcaggagctagcgaagcttaagaagg 467
>gb|BM377568.2|BM377568 EBem04_SQ003_I13_R embryo, 12 DPA, no treatment, cv Optic, EBem04
Hordeum vulgare subsp. vulgare cDNA clone
EBem04_SQ003_I13 5', mRNA sequence
Length = 591
Score = 436 bits (220), Expect = e-121
Identities = 349/392 (89%)
Strand = Plus / Plus
Query: 94 aatgccgttcaagaggttcgtggagatcgggcgcgtggcccttgtgaactacggcaaaga 153
|||||||||||||||||| |||||||||||||| |||||||| |||||||||||||| ||
Sbjct: 75 aatgccgttcaagaggtttgtggagatcgggcgggtggccctggtgaactacggcaagga 134
Query: 154 ctacggccgcctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgc 213
||||||||||||||||||||||||||| || ||||||||||||||||||||| | || ||
Sbjct: 135 ctacggccgcctcgtcgtcatcgtcgacgttgtcgaccagaacagggcacttattgatgc 194
Query: 214 ccctgatatggtcaggtgccagattaacttcaaacggctctcacttaccgacatcaagat 273
|| || ||| || | |||||||| |||||||| |||||||| || ||||||||||||||
Sbjct: 195 accggacatgatccgctgccagatgaacttcaagcggctctccctgaccgacatcaagat 254
Query: 274 tgacatcaaacgtgtccccaagaagtcaaccttgatcaaggctatggaggaagctgatgt 333
||||||||| || |||| |||||| |||| ||||||| ||||||||||||||||||||
Sbjct: 255 tgacatcaagcggatccctaagaaggcaactctgatcaaagctatggaggaagctgatgt 314
Query: 334 gaagactaagtgggagaacagctcatggggcaagaagctgattgtccagaagaggagggc 393
|||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 315 gaagaccaagtgggagaacagttcatggggcaagaagctgattgtccagaagaggagggc 374
Query: 394 tgcactcagtgactttgacaggttcaaggtcatgctggcaaggatcaagaggggtggtgc 453
| |||| ||||||||||||||||||||||||||| || | |||||||||||| || ||
Sbjct: 375 atcgctcaatgactttgacaggttcaaggtcatgcttgccaagatcaagaggggaggagc 434
Query: 454 tatcaggcaagagctctccaagctgaagaagg 485
||||||||| ||||| | ||||| |||||||
Sbjct: 435 tatcaggcaggagctagcgaagcttaagaagg 466
>gb|BM376611.2|BM376611 EBem05_SQ002_L09_R embryo, 14 DPA, no treatment, cv Optic, EBem05
Hordeum vulgare subsp. vulgare cDNA clone
EBem05_SQ002_L09 5', mRNA sequence
Length = 581
Score = 436 bits (220), Expect = e-121
Identities = 349/392 (89%)
Strand = Plus / Plus
Query: 94 aatgccgttcaagaggttcgtggagatcgggcgcgtggcccttgtgaactacggcaaaga 153
|||||||||||||||||| |||||||||||||| |||||||| |||||||||||||| ||
Sbjct: 70 aatgccgttcaagaggtttgtggagatcgggcgggtggccctggtgaactacggcaagga 129
Query: 154 ctacggccgcctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgc 213
||||||||||||||||||||||||||| || ||||||||||||||||||||| | || ||
Sbjct: 130 ctacggccgcctcgtcgtcatcgtcgacgttgtcgaccagaacagggcacttattgatgc 189
Query: 214 ccctgatatggtcaggtgccagattaacttcaaacggctctcacttaccgacatcaagat 273
|| || ||| || | |||||||| |||||||| |||||||| || ||||||||||||||
Sbjct: 190 accggacatgatccgctgccagatgaacttcaagcggctctccctgaccgacatcaagat 249
Query: 274 tgacatcaaacgtgtccccaagaagtcaaccttgatcaaggctatggaggaagctgatgt 333
||||||||| || |||| |||||| |||| ||||||| ||||||||||||||||||||
Sbjct: 250 tgacatcaagcggatccctaagaaggcaactctgatcaaagctatggaggaagctgatgt 309
Query: 334 gaagactaagtgggagaacagctcatggggcaagaagctgattgtccagaagaggagggc 393
|||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 310 gaagaccaagtgggagaacagttcatggggcaagaagctgattgtccagaagaggagggc 369
Query: 394 tgcactcagtgactttgacaggttcaaggtcatgctggcaaggatcaagaggggtggtgc 453
| |||| ||||||||||||||||||||||||||| || | |||||||||||| || ||
Sbjct: 370 atcgctcaatgactttgacaggttcaaggtcatgcttgccaagatcaagaggggaggagc 429
Query: 454 tatcaggcaagagctctccaagctgaagaagg 485
||||||||| ||||| | ||||| |||||||
Sbjct: 430 tatcaggcaggagctagcgaagcttaagaagg 461
>gb|BI780084.2|BI780084 EBma08_SQ001_F19_R maternal, 28 DPA, no treatment, cv Optic, EBma08
Hordeum vulgare subsp. vulgare cDNA clone
EBma08_SQ001_F19 5', mRNA sequence
Length = 595
Score = 436 bits (220), Expect = e-121
Identities = 349/392 (89%)
Strand = Plus / Plus
Query: 94 aatgccgttcaagaggttcgtggagatcgggcgcgtggcccttgtgaactacggcaaaga 153
|||||||||||||||||| |||||||||||||| |||||||| |||||||||||||| ||
Sbjct: 80 aatgccgttcaagaggtttgtggagatcgggcgggtggccctggtgaactacggcaagga 139
Query: 154 ctacggccgcctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgc 213
||||||||||||||||||||||||||| || ||||||||||||||||||||| | || ||
Sbjct: 140 ctacggccgcctcgtcgtcatcgtcgacgttgtcgaccagaacagggcacttattgatgc 199
Query: 214 ccctgatatggtcaggtgccagattaacttcaaacggctctcacttaccgacatcaagat 273
|| || ||| || | |||||||| |||||||| |||||||| || ||||||||||||||
Sbjct: 200 accggacatgatccgctgccagatgaacttcaagcggctctccctgaccgacatcaagat 259
Query: 274 tgacatcaaacgtgtccccaagaagtcaaccttgatcaaggctatggaggaagctgatgt 333
||||||||| || |||| |||||| |||| ||||||| ||||||||||||||||||||
Sbjct: 260 tgacatcaagcggatccctaagaaggcaactctgatcaaagctatggaggaagctgatgt 319
Query: 334 gaagactaagtgggagaacagctcatggggcaagaagctgattgtccagaagaggagggc 393
|||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gaagaccaagtgggagaacagttcatggggcaagaagctgattgtccagaagaggagggc 379
Query: 394 tgcactcagtgactttgacaggttcaaggtcatgctggcaaggatcaagaggggtggtgc 453
| |||| ||||||||||||||||||||||||||| || | |||||||||||| || ||
Sbjct: 380 atcgctcaatgactttgacaggttcaaggtcatgcttgccaagatcaagaggggaggagc 439
Query: 454 tatcaggcaagagctctccaagctgaagaagg 485
||||||||| ||||| | ||||| |||||||
Sbjct: 440 tatcaggcaggagctagcgaagcttaagaagg 471
>gb|BM101137.2|BM101137 EBpi01_SQ002_P21_R pistil, 1 DPA, no treatment, cv Optic, EBpi01
Hordeum vulgare subsp. vulgare cDNA clone
EBpi01_SQ002_P21 5', mRNA sequence
Length = 614
Score = 436 bits (220), Expect = e-121
Identities = 349/392 (89%)
Strand = Plus / Plus
Query: 94 aatgccgttcaagaggttcgtggagatcgggcgcgtggcccttgtgaactacggcaaaga 153
|||||||||||||||||| |||||||||||||| |||||||| |||||||||||||| ||
Sbjct: 52 aatgccgttcaagaggtttgtggagatcgggcgggtggccctggtgaactacggcaagga 111
Query: 154 ctacggccgcctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgc 213
||||||||||||||||||||||||||| || ||||||||||||||||||||| | || ||
Sbjct: 112 ctacggccgcctcgtcgtcatcgtcgacgttgtcgaccagaacagggcacttattgatgc 171
Query: 214 ccctgatatggtcaggtgccagattaacttcaaacggctctcacttaccgacatcaagat 273
|| || ||| || | |||||||| |||||||| |||||||| || ||||||||||||||
Sbjct: 172 accggacatgatccgctgccagatgaacttcaagcggctctccctgaccgacatcaagat 231
Query: 274 tgacatcaaacgtgtccccaagaagtcaaccttgatcaaggctatggaggaagctgatgt 333
||||||||| || |||| |||||| |||| ||||||| ||||||||||||||||||||
Sbjct: 232 tgacatcaagcggatccctaagaaggcaactctgatcaaagctatggaggaagctgatgt 291
Query: 334 gaagactaagtgggagaacagctcatggggcaagaagctgattgtccagaagaggagggc 393
|||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 292 gaagaccaagtgggagaacagttcatggggcaagaagctgattgtccagaagaggagggc 351
Query: 394 tgcactcagtgactttgacaggttcaaggtcatgctggcaaggatcaagaggggtggtgc 453
| |||| ||||||||||||||||||||||||||| || | |||||||||||| || ||
Sbjct: 352 atcgctcaatgactttgacaggttcaaggtcatgcttgccaagatcaagaggggaggagc 411
Query: 454 tatcaggcaagagctctccaagctgaagaagg 485
||||||||| ||||| | ||||| |||||||
Sbjct: 412 tatcaggcaggagctagcgaagcttaagaagg 443
>gb|BM370559.2|BM370559 EBro08_SQ004_J13_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ004_J13 5', mRNA sequence
Length = 595
Score = 436 bits (220), Expect = e-121
Identities = 349/392 (89%)
Strand = Plus / Plus
Query: 94 aatgccgttcaagaggttcgtggagatcgggcgcgtggcccttgtgaactacggcaaaga 153
|||||||||||||||||| |||||||||||||| |||||||| |||||||||||||| ||
Sbjct: 75 aatgccgttcaagaggtttgtggagatcgggcgggtggccctggtgaactacggcaagga 134
Query: 154 ctacggccgcctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgc 213
||||||||||||||||||||||||||| || ||||||||||||||||||||| | || ||
Sbjct: 135 ctacggccgcctcgtcgtcatcgtcgacgttgtcgaccagaacagggcacttattgatgc 194
Query: 214 ccctgatatggtcaggtgccagattaacttcaaacggctctcacttaccgacatcaagat 273
|| || ||| || | |||||||| |||||||| |||||||| || ||||||||||||||
Sbjct: 195 accggacatgatccgctgccagatgaacttcaagcggctctccctgaccgacatcaagat 254
Query: 274 tgacatcaaacgtgtccccaagaagtcaaccttgatcaaggctatggaggaagctgatgt 333
||||||||| || |||| |||||| |||| ||||||| ||||||||||||||||||||
Sbjct: 255 tgacatcaagcggatccctaagaaggcaactctgatcaaagctatggaggaagctgatgt 314
Query: 334 gaagactaagtgggagaacagctcatggggcaagaagctgattgtccagaagaggagggc 393
|||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 315 gaagaccaagtgggagaacagttcatggggcaagaagctgattgtccagaagaggagggc 374
Query: 394 tgcactcagtgactttgacaggttcaaggtcatgctggcaaggatcaagaggggtggtgc 453
| |||| ||||||||||||||||||||||||||| || | |||||||||||| || ||
Sbjct: 375 atcgctcaatgactttgacaggttcaaggtcatgcttgccaagatcaagaggggaggagc 434
Query: 454 tatcaggcaagagctctccaagctgaagaagg 485
||||||||| ||||| | ||||| |||||||
Sbjct: 435 tatcaggcaggagctagcgaagcttaagaagg 466
>gb|BQ756834.1|BQ756834 EBem09_SQ003_O10_R embryo, 1 Day germination, no treatment, cv
Optic, EBem09 Hordeum vulgare subsp. vulgare cDNA clone
EBem09_SQ003_O10 5', mRNA sequence
Length = 523
Score = 436 bits (220), Expect = e-121
Identities = 348/391 (89%)
Strand = Plus / Plus
Query: 95 atgccgttcaagaggttcgtggagatcgggcgcgtggcccttgtgaactacggcaaagac 154
|||||||||||||||||||| ||||||||||| |||||||| |||||||||||||| |||
Sbjct: 59 atgccgttcaagaggttcgtcgagatcgggcgggtggccctggtgaactacggcaaggac 118
Query: 155 tacggccgcctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgcc 214
|||||||||||||||||||||||||| || |||||||||||| ||||||| || |||||
Sbjct: 119 tacggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaaccgggcactcgtcgacgct 178
Query: 215 cctgatatggtcaggtgccagattaacttcaaacggctctcacttaccgacatcaagatt 274
||||||||| ||||||||||||| |||||||| || || ||||| |||||||||||||||
Sbjct: 179 cctgatatgatcaggtgccagatgaacttcaagcgtctttcactgaccgacatcaagatt 238
Query: 275 gacatcaaacgtgtccccaagaagtcaaccttgatcaaggctatggaggaagctgatgtg 334
|||||||| ||| ||||||| ||| |||| ||||||||||| ||||||||||||||||||
Sbjct: 239 gacatcaagcgtatccccaaaaaggcaactttgatcaaggccatggaggaagctgatgtg 298
Query: 335 aagactaagtgggagaacagctcatggggcaagaagctgattgtccagaagaggagggct 394
|| || || |||||||||||||| |||||||||||||| ||||| |||||||| || ||
Sbjct: 299 aaaaccaaatgggagaacagctcctggggcaagaagcttattgttcagaagagaagagca 358
Query: 395 gcactcagtgactttgacaggttcaaggtcatgctggcaaggatcaagaggggtggtgct 454
| || | ||||||||||||||||||||||||| |||| | ||| |||||||||||||||
Sbjct: 359 tcgctgaatgactttgacaggttcaaggtcatgttggctaagattaagaggggtggtgct 418
Query: 455 atcaggcaagagctctccaagctgaagaagg 485
|||| ||||||||| ||||||| |||||||
Sbjct: 419 atcangcaagagcttgccaagctcaagaagg 449
>gb|BQ759446.1|BQ759446 EBpi01_SQ004_E14_R pistil, 1 DPA, no treatment, cv Optic, EBpi01
Hordeum vulgare subsp. vulgare cDNA clone
EBpi01_SQ004_E14 5', mRNA sequence
Length = 570
Score = 436 bits (220), Expect = e-121
Identities = 349/392 (89%)
Strand = Plus / Plus
Query: 94 aatgccgttcaagaggttcgtggagatcgggcgcgtggcccttgtgaactacggcaaaga 153
|||||||||||||||||| |||||||||||||| |||||||| |||||||||||||| ||
Sbjct: 82 aatgccgttcaagaggtttgtggagatcgggcgggtggccctggtgaactacggcaagga 141
Query: 154 ctacggccgcctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgc 213
||||||||||||||||||||||||||| || ||||||||||||||||||||| | || ||
Sbjct: 142 ctacggccgcctcgtcgtcatcgtcgacgttgtcgaccagaacagggcacttattgatgc 201
Query: 214 ccctgatatggtcaggtgccagattaacttcaaacggctctcacttaccgacatcaagat 273
|| || ||| || | |||||||| |||||||| |||||||| || ||||||||||||||
Sbjct: 202 accggacatgatccgctgccagatgaacttcaagcggctctccctgaccgacatcaagat 261
Query: 274 tgacatcaaacgtgtccccaagaagtcaaccttgatcaaggctatggaggaagctgatgt 333
||||||||| || |||| |||||| |||| ||||||| ||||||||||||||||||||
Sbjct: 262 tgacatcaagcggatccctaagaaggcaactctgatcaaagctatggaggaagctgatgt 321
Query: 334 gaagactaagtgggagaacagctcatggggcaagaagctgattgtccagaagaggagggc 393
|||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 322 gaagaccaagtgggagaacagttcatggggcaagaagctgattgtccagaagaggagggc 381
Query: 394 tgcactcagtgactttgacaggttcaaggtcatgctggcaaggatcaagaggggtggtgc 453
| |||| ||||||||||||||||||||||||||| || | |||||||||||| || ||
Sbjct: 382 atcgctcaatgactttgacaggttcaaggtcatgcttgccaagatcaagaggggaggagc 441
Query: 454 tatcaggcaagagctctccaagctgaagaagg 485
||||||||| ||||| | ||||| |||||||
Sbjct: 442 tatcaggcaggagctagcgaagcttaagaagg 473
>gb|BQ764353.1|BQ764353 EBan01_SQ005_I17_R anther, yellow stage, no treatment, cv Optic,
EBan01 Hordeum vulgare subsp. vulgare cDNA clone
EBan01_SQ005_I17 5', mRNA sequence
Length = 621
Score = 436 bits (220), Expect = e-121
Identities = 349/392 (89%)
Strand = Plus / Plus
Query: 94 aatgccgttcaagaggttcgtggagatcgggcgcgtggcccttgtgaactacggcaaaga 153
|||||||||||||||||| |||||||||||||| |||||||| |||||||||||||| ||
Sbjct: 60 aatgccgttcaagaggtttgtggagatcgggcgggtggccctggtgaactacggcaagga 119
Query: 154 ctacggccgcctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgc 213
||||||||||||||||||||||||||| || ||||||||||||||||||||| | || ||
Sbjct: 120 ctacggccgcctcgtcgtcatcgtcgacgttgtcgaccagaacagggcacttattgatgc 179
Query: 214 ccctgatatggtcaggtgccagattaacttcaaacggctctcacttaccgacatcaagat 273
|| || ||| || | |||||||| |||||||| |||||||| || ||||||||||||||
Sbjct: 180 accggacatgatccgctgccagatgaacttcaagcggctctccctgaccgacatcaagat 239
Query: 274 tgacatcaaacgtgtccccaagaagtcaaccttgatcaaggctatggaggaagctgatgt 333
||||||||| || |||| |||||| |||| ||||||| ||||||||||||||||||||
Sbjct: 240 tgacatcaagcggatccctaagaaggcaactctgatcaaagctatggaggaagctgatgt 299
Query: 334 gaagactaagtgggagaacagctcatggggcaagaagctgattgtccagaagaggagggc 393
|||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 300 gaagaccaagtgggagaacagttcatggggcaagaagctgattgtccagaagaggagggc 359
Query: 394 tgcactcagtgactttgacaggttcaaggtcatgctggcaaggatcaagaggggtggtgc 453
| |||| ||||||||||||||||||||||||||| || | |||||||||||| || ||
Sbjct: 360 atcgctcaatgactttgacaggttcaaggtcatgcttgccaagatcaagaggggaggagc 419
Query: 454 tatcaggcaagagctctccaagctgaagaagg 485
||||||||| ||||| | ||||| |||||||
Sbjct: 420 tatcaggcaggagctagcgaagcttaagaagg 451
>gb|BU977241.1|BU977241 HA11B09u HA Hordeum vulgare subsp. vulgare cDNA clone HA11B09
3-PRIME, mRNA sequence
Length = 563
Score = 436 bits (220), Expect = e-121
Identities = 349/392 (89%)
Strand = Plus / Minus
Query: 94 aatgccgttcaagaggttcgtggagatcgggcgcgtggcccttgtgaactacggcaaaga 153
|||||||||||||||||| |||||||||||||| |||||||| |||||||||||||| ||
Sbjct: 530 aatgccgttcaagaggtttgtggagatcgggcgggtggccctggtgaactacggcaagga 471
Query: 154 ctacggccgcctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgc 213
||||||||||||||||||||||||||| || ||||||||||||||||||||| | || ||
Sbjct: 470 ctacggccgcctcgtcgtcatcgtcgacgttgtcgaccagaacagggcacttattgatgc 411
Query: 214 ccctgatatggtcaggtgccagattaacttcaaacggctctcacttaccgacatcaagat 273
|| || ||| || | |||||||| |||||||| |||||||| || ||||||||||||||
Sbjct: 410 accggacatgatccgctgccagatgaacttcaagcggctctccctgaccgacatcaagat 351
Query: 274 tgacatcaaacgtgtccccaagaagtcaaccttgatcaaggctatggaggaagctgatgt 333
||||||||| || |||| |||||| |||| ||||||| ||||||||||||||||||||
Sbjct: 350 tgacatcaagcggatccctaagaaggcaactctgatcaaagctatggaggaagctgatgt 291
Query: 334 gaagactaagtgggagaacagctcatggggcaagaagctgattgtccagaagaggagggc 393
|||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 290 gaagaccaagtgggagaacagttcatggggcaagaagctgattgtccagaagaggagggc 231
Query: 394 tgcactcagtgactttgacaggttcaaggtcatgctggcaaggatcaagaggggtggtgc 453
| |||| ||||||||||||||||||||||||||| || | |||||||||||| || ||
Sbjct: 230 atcgctcaatgactttgacaggttcaaggtcatgcttgccaagatcaagaggggaggagc 171
Query: 454 tatcaggcaagagctctccaagctgaagaagg 485
||||||||| ||||| | ||||| |||||||
Sbjct: 170 tatcaggcaggagctagcgaagcttaagaagg 139
>gb|CA030768.1|CA030768 HX08B07r HX Hordeum vulgare subsp. vulgare cDNA clone HX08B07
5-PRIME, mRNA sequence
Length = 641
Score = 436 bits (220), Expect = e-121
Identities = 349/392 (89%)
Strand = Plus / Plus
Query: 94 aatgccgttcaagaggttcgtggagatcgggcgcgtggcccttgtgaactacggcaaaga 153
|||||||||||||||||| |||||||||||||| |||||||| |||||||||||||| ||
Sbjct: 86 aatgccgttcaagaggtttgtggagatcgggcgggtggccctggtgaactacggcaagga 145
Query: 154 ctacggccgcctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgc 213
||||||||||||||||||||||||||| || ||||||||||||||||||||| | || ||
Sbjct: 146 ctacggccgcctcgtcgtcatcgtcgacgttgtcgaccagaacagggcacttattgatgc 205
Query: 214 ccctgatatggtcaggtgccagattaacttcaaacggctctcacttaccgacatcaagat 273
|| || ||| || | |||||||| |||||||| |||||||| || ||||||||||||||
Sbjct: 206 accggacatgatccgctgccagatgaacttcaagcggctctccctgaccgacatcaagat 265
Query: 274 tgacatcaaacgtgtccccaagaagtcaaccttgatcaaggctatggaggaagctgatgt 333
||||||||| || |||| |||||| |||| ||||||| ||||||||||||||||||||
Sbjct: 266 tgacatcaagcggatccctaagaaggcaactctgatcaaagctatggaggaagctgatgt 325
Query: 334 gaagactaagtgggagaacagctcatggggcaagaagctgattgtccagaagaggagggc 393
|||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 326 gaagaccaagtgggagaacagttcatggggcaagaagctgattgtccagaagaggagggc 385
Query: 394 tgcactcagtgactttgacaggttcaaggtcatgctggcaaggatcaagaggggtggtgc 453
| |||| ||||||||||||||||||||||||||| || | |||||||||||| || ||
Sbjct: 386 atcgctcaatgactttgacaggttcaaggtcatgcttgccaagatcaagaggggaggagc 445
Query: 454 tatcaggcaagagctctccaagctgaagaagg 485
||||||||| ||||| | ||||| |||||||
Sbjct: 446 tatcaggcaggagctagcgaagcttaagaagg 477
>gb|CB874514.1|CB874514 HX05H22w HX Hordeum vulgare subsp. vulgare cDNA clone HX05H22
3-PRIME, mRNA sequence
Length = 569
Score = 436 bits (220), Expect = e-121
Identities = 349/392 (89%)
Strand = Plus / Minus
Query: 94 aatgccgttcaagaggttcgtggagatcgggcgcgtggcccttgtgaactacggcaaaga 153
|||||||||||||||||| |||||||||||||| |||||||| |||||||||||||| ||
Sbjct: 550 aatgccgttcaagaggtttgtggagatcgggcgggtggccctggtgaactacggcaagga 491
Query: 154 ctacggccgcctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgc 213
||||||||||||||||||||||||||| || ||||||||||||||||||||| | || ||
Sbjct: 490 ctacggccgcctcgtcgtcatcgtcgacgttgtcgaccagaacagggcacttattgatgc 431
Query: 214 ccctgatatggtcaggtgccagattaacttcaaacggctctcacttaccgacatcaagat 273
|| || ||| || | |||||||| |||||||| |||||||| || ||||||||||||||
Sbjct: 430 accggacatgatccgctgccagatgaacttcaagcggctctccctgaccgacatcaagat 371
Query: 274 tgacatcaaacgtgtccccaagaagtcaaccttgatcaaggctatggaggaagctgatgt 333
||||||||| || |||| |||||| |||| ||||||| ||||||||||||||||||||
Sbjct: 370 tgacatcaagcggatccctaagaaggcaactctgatcaaagctatggaggaagctgatgt 311
Query: 334 gaagactaagtgggagaacagctcatggggcaagaagctgattgtccagaagaggagggc 393
|||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 310 gaagaccaagtgggagaacagttcatggggcaagaagctgattgtccagaagaggagggc 251
Query: 394 tgcactcagtgactttgacaggttcaaggtcatgctggcaaggatcaagaggggtggtgc 453
| |||| ||||||||||||||||||||||||||| || | |||||||||||| || ||
Sbjct: 250 atcgctcaatgactttgacaggttcaaggtcatgcttgccaagatcaagaggggaggagc 191
Query: 454 tatcaggcaagagctctccaagctgaagaagg 485
||||||||| ||||| | ||||| |||||||
Sbjct: 190 tatcaggcaggagctagcgaagcttaagaagg 159
>gb|CV063549.1|CV063549 BNEL90e7 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL90e7 5' similar to
OSJNBb0072M01.9, mRNA sequence
Length = 609
Score = 436 bits (220), Expect = e-121
Identities = 349/392 (89%)
Strand = Plus / Plus
Query: 94 aatgccgttcaagaggttcgtggagatcgggcgcgtggcccttgtgaactacggcaaaga 153
|||||||||||||||||| |||||||||||||| |||||||| |||||||||||||| ||
Sbjct: 81 aatgccgttcaagaggtttgtggagatcgggcgggtggccctggtgaactacggcaagga 140
Query: 154 ctacggccgcctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgc 213
||||||||||||||||||||||||||| || ||||||||||||||||||||| | || ||
Sbjct: 141 ctacggccgcctcgtcgtcatcgtcgacgttgtcgaccagaacagggcacttattgatgc 200
Query: 214 ccctgatatggtcaggtgccagattaacttcaaacggctctcacttaccgacatcaagat 273
|| || ||| || | |||||||| |||||||| |||||||| || ||||||||||||||
Sbjct: 201 accggacatgatccgctgccagatgaacttcaagcggctctccctgaccgacatcaagat 260
Query: 274 tgacatcaaacgtgtccccaagaagtcaaccttgatcaaggctatggaggaagctgatgt 333
||||||||| || |||| |||||| |||| ||||||| ||||||||||||||||||||
Sbjct: 261 tgacatcaagcggatccctaagaaggcaactctgatcaaagctatggaggaagctgatgt 320
Query: 334 gaagactaagtgggagaacagctcatggggcaagaagctgattgtccagaagaggagggc 393
|||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaagaccaagtgggagaacagttcatggggcaagaagctgattgtccagaagaggagggc 380
Query: 394 tgcactcagtgactttgacaggttcaaggtcatgctggcaaggatcaagaggggtggtgc 453
| |||| ||||||||||||||||||||||||||| || | |||||||||||| || ||
Sbjct: 381 atcgctcaatgactttgacaggttcaaggtcatgcttgccaagatcaagaggggaggagc 440
Query: 454 tatcaggcaagagctctccaagctgaagaagg 485
||||||||| ||||| | ||||| |||||||
Sbjct: 441 tatcaggcaggagctagcgaagcttaagaagg 472
>gb|CK123864.1|CK123864 BES1824105n20 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010N205 5-PRIME, mRNA sequence
Length = 681
Score = 436 bits (220), Expect = e-121
Identities = 349/392 (89%)
Strand = Plus / Plus
Query: 94 aatgccgttcaagaggttcgtggagatcgggcgcgtggcccttgtgaactacggcaaaga 153
|||||||||||||||||| |||||||||||||| |||||||| |||||||||||||| ||
Sbjct: 106 aatgccgttcaagaggtttgtggagatcgggcgggtggccctggtgaactacggcaagga 165
Query: 154 ctacggccgcctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgc 213
||||||||||||||||||||||||||| || ||||||||||||||||||||| | || ||
Sbjct: 166 ctacggccgcctcgtcgtcatcgtcgacgttgtcgaccagaacagggcacttattgatgc 225
Query: 214 ccctgatatggtcaggtgccagattaacttcaaacggctctcacttaccgacatcaagat 273
|| || ||| || | |||||||| |||||||| |||||||| || ||||||||||||||
Sbjct: 226 accggacatgatccgctgccagatgaacttcaagcggctctccctgaccgacatcaagat 285
Query: 274 tgacatcaaacgtgtccccaagaagtcaaccttgatcaaggctatggaggaagctgatgt 333
||||||||| || |||| |||||| |||| ||||||| ||||||||||||||||||||
Sbjct: 286 tgacatcaagcggatccctaagaaggcaactctgatcaaagctatggaggaagctgatgt 345
Query: 334 gaagactaagtgggagaacagctcatggggcaagaagctgattgtccagaagaggagggc 393
|||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 346 gaagaccaagtgggagaacagttcatggggcaagaagctgattgtccagaagaggagggc 405
Query: 394 tgcactcagtgactttgacaggttcaaggtcatgctggcaaggatcaagaggggtggtgc 453
| |||| ||||||||||||||||||||||||||| || | |||||||||||| || ||
Sbjct: 406 atcgctcaatgactttgacaggttcaaggtcatgcttgccaagatcaagaggggaggagc 465
Query: 454 tatcaggcaagagctctccaagctgaagaagg 485
||||||||| ||||| | ||||| |||||||
Sbjct: 466 tatcaggcaggagctagcgaagcttaagaagg 497
>gb|BE421867.1|BE421867 HWM015cF.10r ITEC HWM Barley Leaf Library Hordeum vulgare subsp.
vulgare cDNA clone HWM015cF.10, mRNA sequence
Length = 816
Score = 434 bits (219), Expect = e-120
Identities = 348/391 (89%)
Strand = Plus / Plus
Query: 95 atgccgttcaagaggttcgtggagatcgggcgcgtggcccttgtgaactacggcaaagac 154
|||||||||||||||||||| ||||||||||| |||||||| |||||||||||||| |||
Sbjct: 164 atgccgttcaagaggttcgtcgagatcgggcgggtggccctggtgaactacggcaaggac 223
Query: 155 tacggccgcctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgcc 214
|||||||||||||||||||||||||| || |||||||||||| ||||||| || |||||
Sbjct: 224 tacggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaaccgggcactcgtcgacgct 283
Query: 215 cctgatatggtcaggtgccagattaacttcaaacggctctcacttaccgacatcaagatt 274
||||||||| ||||||||||||| |||||||| || || ||||| |||||||||||||||
Sbjct: 284 cctgatatgatcaggtgccagatgaacttcaagcgtctttcactgaccgacatcaagatt 343
Query: 275 gacatcaaacgtgtccccaagaagtcaaccttgatcaaggctatggaggaagctgatgtg 334
|||||||| ||| ||||||| ||| |||| ||||||||||| ||||||||||||||||||
Sbjct: 344 gacatcaagcgtatccccaaaaaggcaactttgatcaaggccatggaggaagctgatgtg 403
Query: 335 aagactaagtgggagaacagctcatggggcaagaagctgattgtccagaagaggagggct 394
|| || || |||||||||||||| |||||||||||||| ||||| |||||||| || ||
Sbjct: 404 aaaaccaaatgggagaacagctcctggggcaagaagcttattgttcagaagagaagagca 463
Query: 395 gcactcagtgactttgacaggttcaaggtcatgctggcaaggatcaagaggggtggtgct 454
| || | ||||||||||||||||||||||||| |||| | ||| |||||||||||||||
Sbjct: 464 tcgctgaatgactttgacaggttcaaggtcatgttggctaagattaagaggggtggtgct 523
Query: 455 atcaggcaagagctctccaagctgaagaagg 485
||||| |||||||| ||||||| |||||||
Sbjct: 524 atcagacaagagcttgccaagctcaagaagg 554
>gb|BE193624.2|BE193624 HVSMEh0082A09f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0082A09f, mRNA sequence
Length = 759
Score = 434 bits (219), Expect = e-120
Identities = 348/391 (89%)
Strand = Plus / Plus
Query: 95 atgccgttcaagaggttcgtggagatcgggcgcgtggcccttgtgaactacggcaaagac 154
|||||||||||||||||||| ||||||||||| |||||||| |||||||||||||| |||
Sbjct: 38 atgccgttcaagaggttcgtcgagatcgggcgggtggccctggtgaactacggcaaggac 97
Query: 155 tacggccgcctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgcc 214
|||||||||||||||||||||||||| || |||||||||||| ||||||| || |||||
Sbjct: 98 tacggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaaccgggcactcgtcgacgct 157
Query: 215 cctgatatggtcaggtgccagattaacttcaaacggctctcacttaccgacatcaagatt 274
||||||||| ||||||||||||| |||||||| || || ||||| || ||||||||||||
Sbjct: 158 cctgatatgatcaggtgccagatgaacttcaagcgtctttcactgactgacatcaagatt 217
Query: 275 gacatcaaacgtgtccccaagaagtcaaccttgatcaaggctatggaggaagctgatgtg 334
|||||||| ||| ||||||| ||| |||| ||||||||||| ||||||||||||||||||
Sbjct: 218 gacatcaagcgtatccccaaaaaggcaactttgatcaaggccatggaggaagctgatgtg 277
Query: 335 aagactaagtgggagaacagctcatggggcaagaagctgattgtccagaagaggagggct 394
|| || || |||||||||||||| |||||||||||||| ||||| |||||||| || ||
Sbjct: 278 aaaaccaaatgggagaacagctcctggggcaagaagcttattgttcagaagagaagagca 337
Query: 395 gcactcagtgactttgacaggttcaaggtcatgctggcaaggatcaagaggggtggtgct 454
| || | ||||||||||||||||||||||||| |||| | ||| |||||||||||||||
Sbjct: 338 tcgctgaatgactttgacaggttcaaggtcatgttggctaagattaagaggggtggtgct 397
Query: 455 atcaggcaagagctctccaagctgaagaagg 485
|||||||||||||| ||||||| |||||||
Sbjct: 398 atcaggcaagagcttgccaagctcaagaagg 428
>gb|BE196257.2|BE196257 HVSMEh0091M19f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0091M19f, mRNA sequence
Length = 899
Score = 434 bits (219), Expect = e-120
Identities = 348/391 (89%)
Strand = Plus / Plus
Query: 95 atgccgttcaagaggttcgtggagatcgggcgcgtggcccttgtgaactacggcaaagac 154
|||||||||||||||||||| ||||||||||| |||||||| |||||||||||||| |||
Sbjct: 38 atgccgttcaagaggttcgtcgagatcgggcgggtggccctggtgaactacggcaaggac 97
Query: 155 tacggccgcctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgcc 214
|||||||||||||||||||||||||| || |||||||||||| ||||||| || |||||
Sbjct: 98 tacggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaaccgggcactcgtcgacgct 157
Query: 215 cctgatatggtcaggtgccagattaacttcaaacggctctcacttaccgacatcaagatt 274
||||||||| ||||||||||||| |||||||| || || ||||| || ||||||||||||
Sbjct: 158 cctgatatgatcaggtgccagatgaacttcaagcgtctttcactgactgacatcaagatt 217
Query: 275 gacatcaaacgtgtccccaagaagtcaaccttgatcaaggctatggaggaagctgatgtg 334
|||||||| ||| ||||||| ||| |||| ||||||||||| ||||||||||||||||||
Sbjct: 218 gacatcaagcgtatccccaaaaaggcaactttgatcaaggccatggaggaagctgatgtg 277
Query: 335 aagactaagtgggagaacagctcatggggcaagaagctgattgtccagaagaggagggct 394
|| || || |||||||||||||| |||||||||||||| ||||| |||||||| || ||
Sbjct: 278 aaaaccaaatgggagaacagctcctggggcaagaagcttattgttcagaagagaagagca 337
Query: 395 gcactcagtgactttgacaggttcaaggtcatgctggcaaggatcaagaggggtggtgct 454
| || | ||||||||||||||||||||||||| |||| | ||| |||||||||||||||
Sbjct: 338 tcgctgaatgactttgacaggttcaaggtcatgttggctaagattaagaggggtggtgct 397
Query: 455 atcaggcaagagctctccaagctgaagaagg 485
|||||||||||||| ||||||| |||||||
Sbjct: 398 atcaggcaagagcttgccaagctcaagaagg 428
>gb|BE195642.3|BE195642 HVSMEh0090A15f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0090A15f, mRNA sequence
Length = 917
Score = 434 bits (219), Expect = e-120
Identities = 348/391 (89%)
Strand = Plus / Plus
Query: 95 atgccgttcaagaggttcgtggagatcgggcgcgtggcccttgtgaactacggcaaagac 154
|||||||||||||||||||| ||||||||||| |||||||| |||||||||||||| |||
Sbjct: 40 atgccgttcaagaggttcgtcgagatcgggcgggtggccctggtgaactacggcaaggac 99
Query: 155 tacggccgcctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgcc 214
|||||||||||||||||||||||||| || |||||||||||| ||||||| || |||||
Sbjct: 100 tacggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaaccgggcactcgtcgacgct 159
Query: 215 cctgatatggtcaggtgccagattaacttcaaacggctctcacttaccgacatcaagatt 274
||||||||| ||||||||||||| |||||||| || || ||||| || ||||||||||||
Sbjct: 160 cctgatatgatcaggtgccagatgaacttcaagcgtctttcactgactgacatcaagatt 219
Query: 275 gacatcaaacgtgtccccaagaagtcaaccttgatcaaggctatggaggaagctgatgtg 334
|||||||| ||| ||||||| ||| |||| ||||||||||| ||||||||||||||||||
Sbjct: 220 gacatcaagcgtatccccaaaaaggcaactttgatcaaggccatggaggaagctgatgtg 279
Query: 335 aagactaagtgggagaacagctcatggggcaagaagctgattgtccagaagaggagggct 394
|| || || |||||||||||||| |||||||||||||| ||||| |||||||| || ||
Sbjct: 280 aaaaccaaatgggagaacagctcctggggcaagaagcttattgttcagaagagaagagca 339
Query: 395 gcactcagtgactttgacaggttcaaggtcatgctggcaaggatcaagaggggtggtgct 454
| || | ||||||||||||||||||||||||| |||| | ||| |||||||||||||||
Sbjct: 340 tcgctgaatgactttgacaggttcaaggtcatgttggctaagattaagaggggtggtgct 399
Query: 455 atcaggcaagagctctccaagctgaagaagg 485
|||||||||||||| ||||||| |||||||
Sbjct: 400 atcaggcaagagcttgccaagctcaagaagg 430
>gb|AV913899.1|AV913899 AV913899 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags23k24 5', mRNA sequence
Length = 576
Score = 434 bits (219), Expect = e-120
Identities = 348/391 (89%)
Strand = Plus / Plus
Query: 95 atgccgttcaagaggttcgtggagatcgggcgcgtggcccttgtgaactacggcaaagac 154
|||||||||||||||||||| ||||||||||| |||||||| |||||||||||||| |||
Sbjct: 51 atgccgttcaagaggttcgtcgagatcgggcgggtggccctggtgaactacggcaaggac 110
Query: 155 tacggccgcctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgcc 214
|||||||||||||||||||||||||| || |||||||||||| ||||||| || |||||
Sbjct: 111 tacggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaaccgggcactcgtcgacgct 170
Query: 215 cctgatatggtcaggtgccagattaacttcaaacggctctcacttaccgacatcaagatt 274
||||||||| ||||||||||||| |||||||| || || ||||| || ||||||||||||
Sbjct: 171 cctgatatgatcaggtgccagatgaacttcaagcgtctttcactgactgacatcaagatt 230
Query: 275 gacatcaaacgtgtccccaagaagtcaaccttgatcaaggctatggaggaagctgatgtg 334
|||||||| ||| ||||||| ||| |||| ||||||||||| ||||||||||||||||||
Sbjct: 231 gacatcaagcgtatccccaaaaaggcaactttgatcaaggccatggaggaagctgatgtg 290
Query: 335 aagactaagtgggagaacagctcatggggcaagaagctgattgtccagaagaggagggct 394
|| || || |||||||||||||| |||||||||||||| ||||| |||||||| || ||
Sbjct: 291 aaaaccaaatgggagaacagctcctggggcaagaagcttattgttcagaagagaagagca 350
Query: 395 gcactcagtgactttgacaggttcaaggtcatgctggcaaggatcaagaggggtggtgct 454
| || | ||||||||||||||||||||||||| |||| | ||| |||||||||||||||
Sbjct: 351 tcgctgaatgactttgacaggttcaaggtcatgttggctaagattaagaggggtggtgct 410
Query: 455 atcaggcaagagctctccaagctgaagaagg 485
|||||||||||||| ||||||| |||||||
Sbjct: 411 atcaggcaagagcttgccaagctcaagaagg 441
>gb|AJ460492.1|AJ460492 AJ460492 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200012D07F1, mRNA sequence
Length = 420
Score = 434 bits (219), Expect = e-120
Identities = 348/391 (89%)
Strand = Plus / Plus
Query: 95 atgccgttcaagaggttcgtggagatcgggcgcgtggcccttgtgaactacggcaaagac 154
|||||||||||||||||||| ||||||||||| |||||||| |||||||||||||| |||
Sbjct: 20 atgccgttcaagaggttcgtcgagatcgggcgggtggccctggtgaactacggcaaggac 79
Query: 155 tacggccgcctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgcc 214
|||||||||||||||||||||||||| || |||||||||||| ||||||| || |||||
Sbjct: 80 tacggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaaccgggcactcgtcgacgct 139
Query: 215 cctgatatggtcaggtgccagattaacttcaaacggctctcacttaccgacatcaagatt 274
||||||||| ||||||||||||| |||||||| || || ||||| || ||||||||||||
Sbjct: 140 cctgatatgatcaggtgccagatgaacttcaagcgtctttcactgactgacatcaagatt 199
Query: 275 gacatcaaacgtgtccccaagaagtcaaccttgatcaaggctatggaggaagctgatgtg 334
|||||||| ||| ||||||| ||| |||| ||||||||||| ||||||||||||||||||
Sbjct: 200 gacatcaagcgtatccccaaaaaggcaactttgatcaaggccatggaggaagctgatgtg 259
Query: 335 aagactaagtgggagaacagctcatggggcaagaagctgattgtccagaagaggagggct 394
|| || || |||||||||||||| |||||||||||||| ||||| |||||||| || ||
Sbjct: 260 aaaaccaaatgggagaacagctcctggggcaagaagcttattgttcagaagagaagagca 319
Query: 395 gcactcagtgactttgacaggttcaaggtcatgctggcaaggatcaagaggggtggtgct 454
| || | ||||||||||||||||||||||||| |||| | ||| |||||||||||||||
Sbjct: 320 tcgctgaatgactttgacaggttcaaggtcatgttggctaagattaagaggggtggtgct 379
Query: 455 atcaggcaagagctctccaagctgaagaagg 485
|||||||||||||| ||||||| |||||||
Sbjct: 380 atcaggcaagagcttgccaagctcaagaagg 410
>gb|AJ460495.1|AJ460495 AJ460495 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200079E07F1, mRNA sequence
Length = 420
Score = 434 bits (219), Expect = e-120
Identities = 348/391 (89%)
Strand = Plus / Plus
Query: 95 atgccgttcaagaggttcgtggagatcgggcgcgtggcccttgtgaactacggcaaagac 154
|||||||||||||||||||| ||||||||||| |||||||| |||||||||||||| |||
Sbjct: 15 atgccgttcaagaggttcgtcgagatcgggcgggtggccctggtgaactacggcaaggac 74
Query: 155 tacggccgcctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgcc 214
|||||||||||||||||||||||||| || |||||||||||| ||||||| || |||||
Sbjct: 75 tacggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaaccgggcactcgtcgacgct 134
Query: 215 cctgatatggtcaggtgccagattaacttcaaacggctctcacttaccgacatcaagatt 274
||||||||| ||||||||||||| |||||||| || || ||||| || ||||||||||||
Sbjct: 135 cctgatatgatcaggtgccagatgaacttcaagcgtctttcactgactgacatcaagatt 194
Query: 275 gacatcaaacgtgtccccaagaagtcaaccttgatcaaggctatggaggaagctgatgtg 334
|||||||| ||| ||||||| ||| |||| ||||||||||| ||||||||||||||||||
Sbjct: 195 gacatcaagcgtatccccaaaaaggcaactttgatcaaggccatggaggaagctgatgtg 254
Query: 335 aagactaagtgggagaacagctcatggggcaagaagctgattgtccagaagaggagggct 394
|| || || |||||||||||||| |||||||||||||| ||||| |||||||| || ||
Sbjct: 255 aaaaccaaatgggagaacagctcctggggcaagaagcttattgttcagaagagaagagca 314
Query: 395 gcactcagtgactttgacaggttcaaggtcatgctggcaaggatcaagaggggtggtgct 454
| || | ||||||||||||||||||||||||| |||| | ||| |||||||||||||||
Sbjct: 315 tcgctgaatgactttgacaggttcaaggtcatgttggctaagattaagaggggtggtgct 374
Query: 455 atcaggcaagagctctccaagctgaagaagg 485
|||||||||||||| ||||||| |||||||
Sbjct: 375 atcaggcaagagcttgccaagctcaagaagg 405
>gb|BJ465123.1|BJ465123 BJ465123 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags37p10 5', mRNA sequence
Length = 603
Score = 434 bits (219), Expect = e-120
Identities = 348/391 (89%)
Strand = Plus / Plus
Query: 95 atgccgttcaagaggttcgtggagatcgggcgcgtggcccttgtgaactacggcaaagac 154
|||||||||||||||||||| ||||||||||| |||||||| |||||||||||||| |||
Sbjct: 33 atgccgttcaagaggttcgtcgagatcgggcgggtggccctggtgaactacggcaaggac 92
Query: 155 tacggccgcctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgcc 214
|||||||||||||||||||||||||| || |||||||||||| ||||||| || |||||
Sbjct: 93 tacggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaaccgggcactcgtcgacgct 152
Query: 215 cctgatatggtcaggtgccagattaacttcaaacggctctcacttaccgacatcaagatt 274
||||||||| ||||||||||||| |||||||| || || ||||| || ||||||||||||
Sbjct: 153 cctgatatgatcaggtgccagatgaacttcaagcgtctttcactgactgacatcaagatt 212
Query: 275 gacatcaaacgtgtccccaagaagtcaaccttgatcaaggctatggaggaagctgatgtg 334
|||||||| ||| ||||||| ||| |||| ||||||||||| ||||||||||||||||||
Sbjct: 213 gacatcaagcgtatccccaaaaaggcaactttgatcaaggccatggaggaagctgatgtg 272
Query: 335 aagactaagtgggagaacagctcatggggcaagaagctgattgtccagaagaggagggct 394
|| || || |||||||||||||| |||||||||||||| ||||| |||||||| || ||
Sbjct: 273 aaaaccaaatgggagaacagctcctggggcaagaagcttattgttcagaagagaagagca 332
Query: 395 gcactcagtgactttgacaggttcaaggtcatgctggcaaggatcaagaggggtggtgct 454
| || | ||||||||||||||||||||||||| |||| | ||| |||||||||||||||
Sbjct: 333 tcgctgaatgactttgacaggttcaaggtcatgttggctaagattaagaggggtggtgct 392
Query: 455 atcaggcaagagctctccaagctgaagaagg 485
|||||||||||||| ||||||| |||||||
Sbjct: 393 atcaggcaagagcttgccaagctcaagaagg 423
>gb|BQ657240.1|BQ657240 HA09C02u HA Hordeum vulgare subsp. vulgare cDNA clone HA09C02
3-PRIME, mRNA sequence
Length = 460
Score = 434 bits (219), Expect = e-120
Identities = 336/375 (89%)
Strand = Plus / Plus
Query: 94 aatgccgttcaagaggttcgtggagatcgggcgcgtggcccttgtgaactacggcaaaga 153
|||||||||||||||||| |||||||||||||| |||||||| |||||||||||||| ||
Sbjct: 76 aatgccgttcaagaggtttgtggagatcgggcgggtggccctggtgaactacggcaagga 135
Query: 154 ctacggccgcctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgc 213
||||||||||||||||||||||||||| || ||||||||||||||||||||| | || ||
Sbjct: 136 ctacggccgcctcgtcgtcatcgtcgacgttgtcgaccagaacagggcacttattgatgc 195
Query: 214 ccctgatatggtcaggtgccagattaacttcaaacggctctcacttaccgacatcaagat 273
|| || ||| || | |||||||| |||||||| |||||||| || ||||||||||||||
Sbjct: 196 accggacatgatccgctgccagatgaacttcaagcggctctccctgaccgacatcaagat 255
Query: 274 tgacatcaaacgtgtccccaagaagtcaaccttgatcaaggctatggaggaagctgatgt 333
||||||||| || |||| |||||| |||| ||||||| ||||||||||||||||||||
Sbjct: 256 tgacatcaagcggatccctaagaaggcaactctgatcaaagctatggaggaagctgatgt 315
Query: 334 gaagactaagtgggagaacagctcatggggcaagaagctgattgtccagaagaggagggc 393
|||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 316 gaagaccaagtgggagaacagttcatggggcaagaagctgattgtccagaagaggagggc 375
Query: 394 tgcactcagtgactttgacaggttcaaggtcatgctggcaaggatcaagaggggtggtgc 453
| |||| ||||||||||||||||||||||||||| || | |||||||||||| || ||
Sbjct: 376 atcgctcaatgactttgacaggttcaaggtcatgcttgccaagatcaagaggggaggagc 435
Query: 454 tatcaggcaagagct 468
||||||||| |||||
Sbjct: 436 tatcaggcaggagct 450
>gb|BQ657976.1|BQ657976 HA06D06u HA Hordeum vulgare subsp. vulgare cDNA clone HA06D06
3-PRIME, mRNA sequence
Length = 603
Score = 434 bits (219), Expect = e-120
Identities = 348/391 (89%)
Strand = Plus / Minus
Query: 95 atgccgttcaagaggttcgtggagatcgggcgcgtggcccttgtgaactacggcaaagac 154
|||||||||||||||||||| ||||||||||| |||||||| |||||||||||||| |||
Sbjct: 579 atgccgttcaagaggttcgtcgagatcgggcgggtggccctggtgaactacggcaaggac 520
Query: 155 tacggccgcctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgcc 214
|||||||||||||||||||||||||| || |||||||||||| ||||||| || |||||
Sbjct: 519 tacggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaaccgggcactcgtcgacgct 460
Query: 215 cctgatatggtcaggtgccagattaacttcaaacggctctcacttaccgacatcaagatt 274
||||||||| ||||||||||||| |||||||| || || ||||| |||||||||||||||
Sbjct: 459 cctgatatgatcaggtgccagatgaacttcaagcgtctttcactgaccgacatcaagatt 400
Query: 275 gacatcaaacgtgtccccaagaagtcaaccttgatcaaggctatggaggaagctgatgtg 334
|||||||| ||| ||||||| ||| |||| ||||||||||| ||||||||||||||||||
Sbjct: 399 gacatcaagcgtatccccaaaaaggcaactttgatcaaggccatggaggaagctgatgtg 340
Query: 335 aagactaagtgggagaacagctcatggggcaagaagctgattgtccagaagaggagggct 394
|| || || |||||||||||||| |||||||||||||| ||||| |||||||| || ||
Sbjct: 339 aaaaccaaatgggagaacagctcctggggcaagaagcttattgttcagaagagaagagca 280
Query: 395 gcactcagtgactttgacaggttcaaggtcatgctggcaaggatcaagaggggtggtgct 454
| || | ||||||||||||||||||||||||| |||| | ||| |||||||||||||||
Sbjct: 279 tcgctgaatgactttgacaggttcaaggtcatgttggctaagattaagaggggtggtgct 220
Query: 455 atcaggcaagagctctccaagctgaagaagg 485
||||| |||||||| ||||||| |||||||
Sbjct: 219 atcagacaagagcttgccaagctcaagaagg 189
>gb|BM371259.2|BM371259 EBma08_SQ002_A19_R maternal, 28 DPA, no treatment, cv Optic, EBma08
Hordeum vulgare subsp. vulgare cDNA clone
EBma08_SQ002_A19 5', mRNA sequence
Length = 607
Score = 434 bits (219), Expect = e-120
Identities = 348/391 (89%)
Strand = Plus / Plus
Query: 95 atgccgttcaagaggttcgtggagatcgggcgcgtggcccttgtgaactacggcaaagac 154
|||||||||||||||||||| ||||||||||| |||||||| |||||||||||||| |||
Sbjct: 50 atgccgttcaagaggttcgtcgagatcgggcgggtggccctggtgaactacggcaaggac 109
Query: 155 tacggccgcctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgcc 214
|||||||||||||||||||||||||| || |||||||||||| ||||||| || |||||
Sbjct: 110 tacggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaaccgggcactcgtcgacgct 169
Query: 215 cctgatatggtcaggtgccagattaacttcaaacggctctcacttaccgacatcaagatt 274
||||||||| ||||||||||||| |||||||| || || ||||| |||||||||||||||
Sbjct: 170 cctgatatgatcaggtgccagatgaacttcaagcgtctttcactgaccgacatcaagatt 229
Query: 275 gacatcaaacgtgtccccaagaagtcaaccttgatcaaggctatggaggaagctgatgtg 334
|||||||| ||| ||||||| ||| |||| ||||||||||| ||||||||||||||||||
Sbjct: 230 gacatcaagcgtatccccaaaaaggcaactttgatcaaggccatggaggaagctgatgtg 289
Query: 335 aagactaagtgggagaacagctcatggggcaagaagctgattgtccagaagaggagggct 394
|| || || |||||||||||||| |||||||||||||| ||||| |||||||| || ||
Sbjct: 290 aaaaccaaatgggagaacagctcctggggcaagaagcttattgttcagaagagaagagca 349
Query: 395 gcactcagtgactttgacaggttcaaggtcatgctggcaaggatcaagaggggtggtgct 454
| || | ||||||||||||||||||||||||| |||| | ||| |||||||||||||||
Sbjct: 350 tcgctgaatgactttgacaggttcaaggtcatgttggctaagattaagaggggtggtgct 409
Query: 455 atcaggcaagagctctccaagctgaagaagg 485
|||| ||||||||| ||||||| |||||||
Sbjct: 410 atcaagcaagagcttgccaagctcaagaagg 440
>gb|BQ767264.1|BQ767264 EBro08_SQ008_M10_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ008_M10 5', mRNA sequence
Length = 588
Score = 434 bits (219), Expect = e-120
Identities = 336/375 (89%)
Strand = Plus / Plus
Query: 94 aatgccgttcaagaggttcgtggagatcgggcgcgtggcccttgtgaactacggcaaaga 153
|||||||||||||||||| |||||||||||||| |||||||| |||||||||||||| ||
Sbjct: 68 aatgccgttcaagaggtttgtggagatcgggcgggtggccctggtgaactacggcaagga 127
Query: 154 ctacggccgcctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgc 213
||||||||||||||||||||||||||| || ||||||||||||||||||||| | || ||
Sbjct: 128 ctacggccgcctcgtcgtcatcgtcgacgttgtcgaccagaacagggcacttattgatgc 187
Query: 214 ccctgatatggtcaggtgccagattaacttcaaacggctctcacttaccgacatcaagat 273
|| || ||| || | |||||||| |||||||| |||||||| || ||||||||||||||
Sbjct: 188 accggacatgatccgctgccagatgaacttcaagcggctctccctgaccgacatcaagat 247
Query: 274 tgacatcaaacgtgtccccaagaagtcaaccttgatcaaggctatggaggaagctgatgt 333
||||||||| || |||| |||||| |||| ||||||| ||||||||||||||||||||
Sbjct: 248 tgacatcaagcggatccctaagaaggcaactctgatcaaagctatggaggaagctgatgt 307
Query: 334 gaagactaagtgggagaacagctcatggggcaagaagctgattgtccagaagaggagggc 393
|||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gaagaccaagtgggagaacagttcatggggcaagaagctgattgtccagaagaggagggc 367
Query: 394 tgcactcagtgactttgacaggttcaaggtcatgctggcaaggatcaagaggggtggtgc 453
| |||| ||||||||||||||||||||||||||| || | |||||||||||| || ||
Sbjct: 368 atcgctcaatgactttgacaggttcaaggtcatgcttgccaagatcaagaggggaggagc 427
Query: 454 tatcaggcaagagct 468
||||||||| |||||
Sbjct: 428 tatcaggcaggagct 442
>gb|BU972772.1|BU972772 HB22K20r BC Hordeum vulgare subsp. vulgare cDNA clone HB22K20
5-PRIME, mRNA sequence
Length = 590
Score = 434 bits (219), Expect = e-120
Identities = 348/391 (89%)
Strand = Plus / Plus
Query: 95 atgccgttcaagaggttcgtggagatcgggcgcgtggcccttgtgaactacggcaaagac 154
|||||||||||||||||||| ||||||||||| |||||||| |||||||||||||| |||
Sbjct: 65 atgccgttcaagaggttcgtcgagatcgggcgggtggccctggtgaactacggcaaggac 124
Query: 155 tacggccgcctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgcc 214
|||||||||||||||||||||||||| || |||||||||||| ||||||| || |||||
Sbjct: 125 tacggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaaccgggcactcgtcgacgct 184
Query: 215 cctgatatggtcaggtgccagattaacttcaaacggctctcacttaccgacatcaagatt 274
||||||||| ||||||||||||| |||||||| || || ||||| |||||||||||||||
Sbjct: 185 cctgatatgatcaggtgccagatgaacttcaagcgtctttcactgaccgacatcaagatt 244
Query: 275 gacatcaaacgtgtccccaagaagtcaaccttgatcaaggctatggaggaagctgatgtg 334
|||||||| ||| ||||||| ||| |||| ||||||||||| ||||||||||||||||||
Sbjct: 245 gacatcaagcgtatccccaaaaaggcaactttgatcaaggccatggaggaagctgatgtg 304
Query: 335 aagactaagtgggagaacagctcatggggcaagaagctgattgtccagaagaggagggct 394
|| || || |||||||||||||| |||||||||||||| ||||| |||||||| || ||
Sbjct: 305 aaaaccaaatgggagaacagctcctggggcaagaagcttattgttcagaagagaagagca 364
Query: 395 gcactcagtgactttgacaggttcaaggtcatgctggcaaggatcaagaggggtggtgct 454
| || | ||||||||||||||||||||||||| |||| | ||| |||||||||||||||
Sbjct: 365 tcgctgaatgactttgacaggttcaaggtcatgttggctaagattaagaggggtggtgct 424
Query: 455 atcaggcaagagctctccaagctgaagaagg 485
||||| |||||||| ||||||| |||||||
Sbjct: 425 atcagacaagagcttgccaagctcaagaagg 455
>gb|BU982565.1|BU982565 HA26O23r HA Hordeum vulgare subsp. vulgare cDNA clone HA26O23
5-PRIME, mRNA sequence
Length = 609
Score = 434 bits (219), Expect = e-120
Identities = 348/391 (89%)
Strand = Plus / Plus
Query: 95 atgccgttcaagaggttcgtggagatcgggcgcgtggcccttgtgaactacggcaaagac 154
|||||||||||||||||||| ||||||||||| |||||||| |||||||||||||| |||
Sbjct: 59 atgccgttcaagaggttcgtcgagatcgggcgggtggccctggtgaactacggcaaggac 118
Query: 155 tacggccgcctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgcc 214
|||||||||||||||||||||||||| || |||||||||||| ||||||| || |||||
Sbjct: 119 tacggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaaccgggcactcgtcgacgct 178
Query: 215 cctgatatggtcaggtgccagattaacttcaaacggctctcacttaccgacatcaagatt 274
||||||||| ||||||||||||| |||||||| || || ||||| |||||||||||||||
Sbjct: 179 cctgatatgatcaggtgccagatgaacttcaagcgtctttcactgaccgacatcaagatt 238
Query: 275 gacatcaaacgtgtccccaagaagtcaaccttgatcaaggctatggaggaagctgatgtg 334
|||||||| ||| ||||||| ||| |||| ||||||||||| ||||||||||||||||||
Sbjct: 239 gacatcaagcgtatccccaaaaaggcaactttgatcaaggccatggaggaagctgatgtg 298
Query: 335 aagactaagtgggagaacagctcatggggcaagaagctgattgtccagaagaggagggct 394
|| || || |||||||||||||| |||||||||||||| ||||| |||||||| || ||
Sbjct: 299 aaaaccaaatgggagaacagctcctggggcaagaagcttattgttcagaagagaagagca 358
Query: 395 gcactcagtgactttgacaggttcaaggtcatgctggcaaggatcaagaggggtggtgct 454
| || | ||||||||||||||||||||||||| |||| | ||| |||||||||||||||
Sbjct: 359 tcgctgaatgactttgacaggttcaaggtcatgttggctaagattaagaggggtggtgct 418
Query: 455 atcaggcaagagctctccaagctgaagaagg 485
||||| |||||||| ||||||| |||||||
Sbjct: 419 atcagacaagagcttgccaagctcaagaagg 449
>gb|BU983927.1|BU983927 HA31H16r HA Hordeum vulgare subsp. vulgare cDNA clone HA31H16
5-PRIME, mRNA sequence
Length = 604
Score = 434 bits (219), Expect = e-120
Identities = 348/391 (89%)
Strand = Plus / Plus
Query: 95 atgccgttcaagaggttcgtggagatcgggcgcgtggcccttgtgaactacggcaaagac 154
|||||||||||||||||||| ||||||||||| |||||||| |||||||||||||| |||
Sbjct: 60 atgccgttcaagaggttcgtcgagatcgggcgggtggccctggtgaactacggcaaggac 119
Query: 155 tacggccgcctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgcc 214
|||||||||||||||||||||||||| || |||||||||||| ||||||| || |||||
Sbjct: 120 tacggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaaccgggcactcgtcgacgct 179
Query: 215 cctgatatggtcaggtgccagattaacttcaaacggctctcacttaccgacatcaagatt 274
||||||||| ||||||||||||| |||||||| || || ||||| |||||||||||||||
Sbjct: 180 cctgatatgatcaggtgccagatgaacttcaagcgtctttcactgaccgacatcaagatt 239
Query: 275 gacatcaaacgtgtccccaagaagtcaaccttgatcaaggctatggaggaagctgatgtg 334
|||||||| ||| ||||||| ||| |||| ||||||||||| ||||||||||||||||||
Sbjct: 240 gacatcaagcgtatccccaaaaaggcaactttgatcaaggccatggaggaagctgatgtg 299
Query: 335 aagactaagtgggagaacagctcatggggcaagaagctgattgtccagaagaggagggct 394
|| || || |||||||||||||| |||||||||||||| ||||| |||||||| || ||
Sbjct: 300 aaaaccaaatgggagaacagctcctggggcaagaagcttattgttcagaagagaagagca 359
Query: 395 gcactcagtgactttgacaggttcaaggtcatgctggcaaggatcaagaggggtggtgct 454
| || | ||||||||||||||||||||||||| |||| | ||| |||||||||||||||
Sbjct: 360 tcgctgaatgactttgacaggttcaaggtcatgttggctaagattaagaggggtggtgct 419
Query: 455 atcaggcaagagctctccaagctgaagaagg 485
||||| |||||||| ||||||| |||||||
Sbjct: 420 atcagacaagagcttgccaagctcaagaagg 450
>gb|BU989679.1|BU989679 HF22G11r HF Hordeum vulgare subsp. vulgare cDNA clone HF22G11
5-PRIME, mRNA sequence
Length = 609
Score = 434 bits (219), Expect = e-120
Identities = 348/391 (89%)
Strand = Plus / Plus
Query: 95 atgccgttcaagaggttcgtggagatcgggcgcgtggcccttgtgaactacggcaaagac 154
|||||||||||||||||||| ||||||||||| |||||||| |||||||||||||| |||
Sbjct: 49 atgccgttcaagaggttcgtcgagatcgggcgggtggccctggtgaactacggcaaggac 108
Query: 155 tacggccgcctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgcc 214
|||||||||||||||||||||||||| || |||||||||||| ||||||| || |||||
Sbjct: 109 tacggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaaccgggcactcgtcgacgct 168
Query: 215 cctgatatggtcaggtgccagattaacttcaaacggctctcacttaccgacatcaagatt 274
||||||||| ||||||||||||| |||||||| || || ||||| |||||||||||||||
Sbjct: 169 cctgatatgatcaggtgccagatgaacttcaagcgtctttcactgaccgacatcaagatt 228
Query: 275 gacatcaaacgtgtccccaagaagtcaaccttgatcaaggctatggaggaagctgatgtg 334
|||||||| ||| ||||||| ||| |||| ||||||||||| ||||||||||||||||||
Sbjct: 229 gacatcaagcgtatccccaaaaaggcaactttgatcaaggccatggaggaagctgatgtg 288
Query: 335 aagactaagtgggagaacagctcatggggcaagaagctgattgtccagaagaggagggct 394
|| || || |||||||||||||| |||||||||||||| ||||| |||||||| || ||
Sbjct: 289 aaaaccaaatgggagaacagctcctggggcaagaagcttattgttcagaagagaagagca 348
Query: 395 gcactcagtgactttgacaggttcaaggtcatgctggcaaggatcaagaggggtggtgct 454
| || | ||||||||||||||||||||||||| |||| | ||| |||||||||||||||
Sbjct: 349 tcgctgaatgactttgacaggttcaaggtcatgttggctaagattaagaggggtggtgct 408
Query: 455 atcaggcaagagctctccaagctgaagaagg 485
||||| |||||||| ||||||| |||||||
Sbjct: 409 atcagacaagagcttgccaagctcaagaagg 439
>gb|BU994577.1|BU994577 HM07I06r HM Hordeum vulgare subsp. vulgare cDNA clone HM07I06
5-PRIME, mRNA sequence
Length = 614
Score = 434 bits (219), Expect = e-120
Identities = 348/391 (89%)
Strand = Plus / Plus
Query: 95 atgccgttcaagaggttcgtggagatcgggcgcgtggcccttgtgaactacggcaaagac 154
|||||||||||||||||||| ||||||||||| |||||||| |||||||||||||| |||
Sbjct: 58 atgccgttcaagaggttcgtcgagatcgggcgggtggccctggtgaactacggcaaggac 117
Query: 155 tacggccgcctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgcc 214
|||||||||||||||||||||||||| || |||||||||||| ||||||| || |||||
Sbjct: 118 tacggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaaccgggcactcgtcgacgct 177
Query: 215 cctgatatggtcaggtgccagattaacttcaaacggctctcacttaccgacatcaagatt 274
||||||||| ||||||||||||| |||||||| || || ||||| |||||||||||||||
Sbjct: 178 cctgatatgatcaggtgccagatgaacttcaagcgtctttcactgaccgacatcaagatt 237
Query: 275 gacatcaaacgtgtccccaagaagtcaaccttgatcaaggctatggaggaagctgatgtg 334
|||||||| ||| ||||||| ||| |||| ||||||||||| ||||||||||||||||||
Sbjct: 238 gacatcaagcgtatccccaaaaaggcaactttgatcaaggccatggaggaagctgatgtg 297
Query: 335 aagactaagtgggagaacagctcatggggcaagaagctgattgtccagaagaggagggct 394
|| || || |||||||||||||| |||||||||||||| ||||| |||||||| || ||
Sbjct: 298 aaaaccaaatgggagaacagctcctggggcaagaagcttattgttcagaagagaagagca 357
Query: 395 gcactcagtgactttgacaggttcaaggtcatgctggcaaggatcaagaggggtggtgct 454
| || | ||||||||||||||||||||||||| |||| | ||| |||||||||||||||
Sbjct: 358 tcgctgaatgactttgacaggttcaaggtcatgttggctaagattaagaggggtggtgct 417
Query: 455 atcaggcaagagctctccaagctgaagaagg 485
||||| |||||||| ||||||| |||||||
Sbjct: 418 atcagacaagagcttgccaagctcaagaagg 448
>gb|CA008553.1|CA008553 HU11F06r HU Hordeum vulgare subsp. vulgare cDNA clone HU11F06
5-PRIME, mRNA sequence
Length = 550
Score = 434 bits (219), Expect = e-120
Identities = 348/391 (89%)
Strand = Plus / Plus
Query: 95 atgccgttcaagaggttcgtggagatcgggcgcgtggcccttgtgaactacggcaaagac 154
|||||||||||||||||||| ||||||||||| |||||||| |||||||||||||| |||
Sbjct: 41 atgccgttcaagaggttcgtcgagatcgggcgggtggccctggtgaactacggcaaggac 100
Query: 155 tacggccgcctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgcc 214
|||||||||||||||||||||||||| || |||||||||||| ||||||| || |||||
Sbjct: 101 tacggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaaccgggcactcgtcgacgct 160
Query: 215 cctgatatggtcaggtgccagattaacttcaaacggctctcacttaccgacatcaagatt 274
||||||||| ||||||||||||| |||||||| || || ||||| |||||||||||||||
Sbjct: 161 cctgatatgatcaggtgccagatgaacttcaagcgtctttcactgaccgacatcaagatt 220
Query: 275 gacatcaaacgtgtccccaagaagtcaaccttgatcaaggctatggaggaagctgatgtg 334
|||||||| ||| ||||||| ||| |||| ||||||||||| ||||||||||||||||||
Sbjct: 221 gacatcaagcgtatccccaaaaaggcaactttgatcaaggccatggaggaagctgatgtg 280
Query: 335 aagactaagtgggagaacagctcatggggcaagaagctgattgtccagaagaggagggct 394
|| || || |||||||||||||| |||||||||||||| ||||| |||||||| || ||
Sbjct: 281 aaaaccaaatgggagaacagctcctggggcaagaagcttattgttcagaagagaagagca 340
Query: 395 gcactcagtgactttgacaggttcaaggtcatgctggcaaggatcaagaggggtggtgct 454
| || | ||||||||||||||||||||||||| |||| | ||| |||||||||||||||
Sbjct: 341 tcgctgaatgactttgacaggttcaaggtcatgttggctaagattaagaggggtggtgct 400
Query: 455 atcaggcaagagctctccaagctgaagaagg 485
||||| |||||||| ||||||| |||||||
Sbjct: 401 atcagacaagagcttgccaagctcaagaagg 431
>gb|CA011664.1|CA011664 HT03D07r HT Hordeum vulgare subsp. vulgare cDNA clone HT03D07
5-PRIME, mRNA sequence
Length = 586
Score = 434 bits (219), Expect = e-120
Identities = 348/391 (89%)
Strand = Plus / Plus
Query: 95 atgccgttcaagaggttcgtggagatcgggcgcgtggcccttgtgaactacggcaaagac 154
|||||||||||||||||||| ||||||||||| |||||||| |||||||||||||| |||
Sbjct: 61 atgccgttcaagaggttcgtcgagatcgggcgggtggccctggtgaactacggcaaggac 120
Query: 155 tacggccgcctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgcc 214
|||||||||||||||||||||||||| || |||||||||||| ||||||| || |||||
Sbjct: 121 tacggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaaccgggcactcgtcgacgct 180
Query: 215 cctgatatggtcaggtgccagattaacttcaaacggctctcacttaccgacatcaagatt 274
||||||||| ||||||||||||| |||||||| || || ||||| |||||||||||||||
Sbjct: 181 cctgatatgatcaggtgccagatgaacttcaagcgtctttcactgaccgacatcaagatt 240
Query: 275 gacatcaaacgtgtccccaagaagtcaaccttgatcaaggctatggaggaagctgatgtg 334
|||||||| ||| ||||||| ||| |||| ||||||||||| ||||||||||||||||||
Sbjct: 241 gacatcaagcgtatccccaaaaaggcaactttgatcaaggccatggaggaagctgatgtg 300
Query: 335 aagactaagtgggagaacagctcatggggcaagaagctgattgtccagaagaggagggct 394
|| || || |||||||||||||| |||||||||||||| ||||| |||||||| || ||
Sbjct: 301 aaaaccaaatgggagaacagctcctggggcaagaagcttattgttcagaagagaagagca 360
Query: 395 gcactcagtgactttgacaggttcaaggtcatgctggcaaggatcaagaggggtggtgct 454
| || | ||||||||||||||||||||||||| |||| | ||| |||||||||||||||
Sbjct: 361 tcgctgaatgactttgacaggttcaaggtcatgttggctaagattaagaggggtggtgct 420
Query: 455 atcaggcaagagctctccaagctgaagaagg 485
||||| |||||||| ||||||| |||||||
Sbjct: 421 atcagacaagagcttgccaagctcaagaagg 451
>gb|CA017707.1|CA017707 HV05P22r HV Hordeum vulgare subsp. vulgare cDNA clone HV05P22
5-PRIME, mRNA sequence
Length = 500
Score = 434 bits (219), Expect = e-120
Identities = 348/391 (89%)
Strand = Plus / Plus
Query: 95 atgccgttcaagaggttcgtggagatcgggcgcgtggcccttgtgaactacggcaaagac 154
|||||||||||||||||||| ||||||||||| |||||||| |||||||||||||| |||
Sbjct: 49 atgccgttcaagaggttcgtcgagatcgggcgggtggccctggtgaactacggcaaggac 108
Query: 155 tacggccgcctcgtcgtcatcgtcgatgtggtcgaccagaacagggcacttgtggacgcc 214
|||||||||||||||||||||||||| || |||||||||||| ||||||| || |||||
Sbjct: 109 tacggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaaccgggcactcgtcgacgct 168
Query: 215 cctgatatggtcaggtgccagattaacttcaaacggctctcacttaccgacatcaagatt 274
||||||||| ||||||||||||| |||||||| || || ||||| |||||||||||||||
Sbjct: 169 cctgatatgatcaggtgccagatgaacttcaagcgtctttcactgaccgacatcaagatt 228
Query: 275 gacatcaaacgtgtccccaagaagtcaaccttgatcaaggctatggaggaagctgatgtg 334
|||||||| ||| ||||||| ||| |||| ||||||||||| ||||||||||||||||||
Sbjct: 229 gacatcaagcgtatccccaaaaaggcaactttgatcaaggccatggaggaagctgatgtg 288
Query: 335 aagactaagtgggagaacagctcatggggcaagaagctgattgtccagaagaggagggct 394
|| || || |||||||||||||| |||||||||||||| ||||| |||||||| || ||
Sbjct: 289 aaaaccaaatgggagaacagctcctggggcaagaagcttattgttcagaagagaagagca 348
Query: 395 gcactcagtgactttgacaggttcaaggtcatgctggcaaggatcaagaggggtggtgct 454
| || | ||||||||||||||||||||||||| |||| | ||| |||||||||||||||
Sbjct: 349 tcgctgaatgactttgacaggttcaaggtcatgttggctaagattaagaggggtggtgct 408
Query: 455 atcaggcaagagctctccaagctgaagaagg 485
||||| |||||||| ||||||| |||||||
Sbjct: 409 atcagacaagagcttgccaagctcaagaagg 439
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 90,164
Number of Sequences: 312970
Number of extensions: 90164
Number of successful extensions: 26684
Number of sequences better than 0.5: 174
Number of HSP's better than 0.5 without gapping: 174
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 26350
Number of HSP's gapped (non-prelim): 184
length of query: 801
length of database: 175,134,539
effective HSP length: 19
effective length of query: 782
effective length of database: 169,188,109
effective search space: 132305101238
effective search space used: 132305101238
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)