BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1804904.2.1
(690 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AJ460382.1|AJ460382 AJ460382 S00002 Hordeum vulgare subs... 454 e-126
gb|BF263456.3|BF263456 HV_CEa0006M17f Hordeum vulgare seedl... 450 e-125
gb|BQ657133.1|BQ657133 HA09I10u HA Hordeum vulgare subsp. v... 450 e-125
gb|BI780084.2|BI780084 EBma08_SQ001_F19_R maternal, 28 DPA,... 450 e-125
gb|BM370559.2|BM370559 EBro08_SQ004_J13_R root, 3 week, dro... 450 e-125
gb|BQ759446.1|BQ759446 EBpi01_SQ004_E14_R pistil, 1 DPA, no... 450 e-125
gb|BU977241.1|BU977241 HA11B09u HA Hordeum vulgare subsp. v... 450 e-125
gb|CA030768.1|CA030768 HX08B07r HX Hordeum vulgare subsp. v... 450 e-125
gb|CB874514.1|CB874514 HX05H22w HX Hordeum vulgare subsp. v... 450 e-125
gb|CV063549.1|CV063549 BNEL90e7 Barley EST endosperm librar... 450 e-125
gb|CK123864.1|CK123864 BES1824105n20 BES1824 Hordeum vulgar... 450 e-125
gb|BG344422.1|BG344422 HVSMEg0009D14f Hordeum vulgare pre-a... 448 e-124
gb|BQ460332.1|BQ460332 HA06I23r HA Hordeum vulgare subsp. v... 444 e-123
gb|BM377568.2|BM377568 EBem04_SQ003_I13_R embryo, 12 DPA, n... 444 e-123
gb|BM376611.2|BM376611 EBem05_SQ002_L09_R embryo, 14 DPA, n... 444 e-123
gb|BQ764353.1|BQ764353 EBan01_SQ005_I17_R anther, yellow st... 444 e-123
gb|BQ768753.1|BQ768753 EBro08_SQ012_H13_R root, 3 week, dro... 442 e-123
gb|AW982424.3|AW982424 HVSMEg0003D18f Hordeum vulgare pre-a... 440 e-122
gb|BM368114.2|BM368114 EBed01_SQ002_D13_R endosperm, 6 DPA,... 438 e-121
gb|BQ470561.1|BQ470561 HX03F15r HX Hordeum vulgare subsp. v... 436 e-121
gb|BU982731.1|BU982731 HA27H03r HA Hordeum vulgare subsp. v... 436 e-121
gb|CA029887.1|CA029887 HX05H22r HX Hordeum vulgare subsp. v... 436 e-121
gb|BM377528.2|BM377528 EBem04_SQ003_G14_R embryo, 12 DPA, n... 434 e-120
gb|BQ767264.1|BQ767264 EBro08_SQ008_M10_R root, 3 week, dro... 434 e-120
gb|BE193624.2|BE193624 HVSMEh0082A09f Hordeum vulgare 5-45 ... 432 e-120
gb|BE196257.2|BE196257 HVSMEh0091M19f Hordeum vulgare 5-45 ... 432 e-120
gb|BE195642.3|BE195642 HVSMEh0090A15f Hordeum vulgare 5-45 ... 432 e-120
gb|AV913899.1|AV913899 AV913899 K. Sato unpublished cDNA li... 432 e-120
gb|AJ460495.1|AJ460495 AJ460495 S00002 Hordeum vulgare subs... 432 e-120
gb|BJ465123.1|BJ465123 BJ465123 K. Sato unpublished cDNA li... 432 e-120
gb|AJ460492.1|AJ460492 AJ460492 S00002 Hordeum vulgare subs... 430 e-119
gb|BM101137.2|BM101137 EBpi01_SQ002_P21_R pistil, 1 DPA, no... 430 e-119
gb|AV915789.1|AV915789 AV915789 K. Sato unpublished cDNA li... 426 e-118
gb|BQ759429.1|BQ759429 EBpi01_SQ004_B15_R pistil, 1 DPA, no... 426 e-118
gb|CK125896.1|CK125896 BES1824111B1e11 BES1824 Hordeum vulg... 426 e-118
gb|BM816732.1|BM816732 HB02C05_T3.ab1 HB Hordeum vulgare su... 424 e-117
gb|AJ460496.1|AJ460496 AJ460496 S00002 Hordeum vulgare subs... 424 e-117
gb|BJ463077.1|BJ463077 BJ463077 K. Sato unpublished cDNA li... 424 e-117
gb|BJ463126.1|BJ463126 BJ463126 K. Sato unpublished cDNA li... 424 e-117
gb|BJ467579.1|BJ467579 BJ467579 K. Sato unpublished cDNA li... 424 e-117
gb|BQ657240.1|BQ657240 HA09C02u HA Hordeum vulgare subsp. v... 424 e-117
gb|BM377475.2|BM377475 EBem04_SQ003_D24_R embryo, 12 DPA, n... 424 e-117
gb|BM377699.2|BM377699 EBem04_SQ003_O16_R embryo, 12 DPA, n... 424 e-117
gb|BI780787.2|BI780787 EBes01_SQ002_D08_R embryo sac, 4-6 D... 424 e-117
gb|BM101365.2|BM101365 EBpi01_SQ003_K07_R pistil, 1 DPA, no... 424 e-117
gb|BM370305.2|BM370305 EBro08_SQ003_M14_R root, 3 week, dro... 424 e-117
gb|BQ758693.1|BQ758693 EBma07_SQ002_E13_R maternal, 21 DPA,... 424 e-117
gb|BQ762662.1|BQ762662 EBro02_SQ004_L15_R root, 3 week, hyd... 424 e-117
gb|BQ764226.1|BQ764226 EBan01_SQ005_A12_R anther, yellow st... 424 e-117
gb|BQ766935.1|BQ766935 EBro08_SQ007_D15_R root, 3 week, dro... 424 e-117
gb|BQ768014.1|BQ768014 EBro08_SQ010_O11_R root, 3 week, dro... 424 e-117
gb|CA026267.1|CA026267 HZ55G16r HZ Hordeum vulgare subsp. v... 424 e-117
gb|BG368111.2|BG368111 HVSMEi0015L14f Hordeum vulgare 20 DA... 418 e-115
gb|BJ468272.1|BJ468272 BJ468272 K. Sato unpublished cDNA li... 418 e-115
gb|BQ756834.1|BQ756834 EBem09_SQ003_O10_R embryo, 1 Day ger... 418 e-115
gb|BE421867.1|BE421867 HWM015cF.10r ITEC HWM Barley Leaf Li... 416 e-115
gb|BQ657976.1|BQ657976 HA06D06u HA Hordeum vulgare subsp. v... 416 e-115
gb|BM371259.2|BM371259 EBma08_SQ002_A19_R maternal, 28 DPA,... 416 e-115
gb|BU972772.1|BU972772 HB22K20r BC Hordeum vulgare subsp. v... 416 e-115
gb|BU982565.1|BU982565 HA26O23r HA Hordeum vulgare subsp. v... 416 e-115
gb|BU983927.1|BU983927 HA31H16r HA Hordeum vulgare subsp. v... 416 e-115
gb|BU989679.1|BU989679 HF22G11r HF Hordeum vulgare subsp. v... 416 e-115
gb|BU994577.1|BU994577 HM07I06r HM Hordeum vulgare subsp. v... 416 e-115
gb|CA008553.1|CA008553 HU11F06r HU Hordeum vulgare subsp. v... 416 e-115
gb|CA011664.1|CA011664 HT03D07r HT Hordeum vulgare subsp. v... 416 e-115
gb|CA017707.1|CA017707 HV05P22r HV Hordeum vulgare subsp. v... 416 e-115
gb|CB883479.1|CB883479 HQ02G05w HQ Hordeum vulgare subsp. v... 416 e-115
gb|CK124268.1|CK124268 BES1824108c13 BES1824 Hordeum vulgar... 416 e-115
gb|BM375212.2|BM375212 EBem06_SQ002_L01_R embryo, 21 DPA, n... 410 e-113
gb|BQ761233.1|BQ761233 EBro04_SQ004_M16_R root, 3 week, sal... 410 e-113
gb|BU974599.1|BU974599 HB28H15r BC Hordeum vulgare subsp. v... 410 e-113
gb|BM377218.2|BM377218 EBem05_SQ004_H13_R embryo, 14 DPA, n... 408 e-113
gb|BM370293.2|BM370293 EBro08_SQ003_L24_R root, 3 week, dro... 408 e-113
gb|AL505608.1|AL505608 AL505608 Hordeum vulgare Barke roots... 406 e-112
gb|BQ665383.1|BQ665383 HX03F15u HX Hordeum vulgare subsp. v... 406 e-112
gb|BE420961.1|BE420961 HWM004.D02 ITEC HWM Barley Leaf Libr... 404 e-111
gb|AW982785.3|AW982785 HVSMEg0004D09f Hordeum vulgare pre-a... 404 e-111
gb|CK125878.1|CK125878 BES1824111A1h09 BES1824 Hordeum vulg... 402 e-111
gb|BF622414.3|BF622414 HVSMEa0004C23f Hordeum vulgare seedl... 400 e-110
gb|BM100980.2|BM100980 EBpi01_SQ002_H24_R pistil, 1 DPA, no... 400 e-110
gb|BU980099.1|BU980099 HA18J12r HA Hordeum vulgare subsp. v... 400 e-110
gb|BJ464005.1|BJ464005 BJ464005 K. Sato unpublished cDNA li... 398 e-110
gb|BU996456.1|BU996456 HM13K19r HM Hordeum vulgare subsp. v... 398 e-110
gb|BU998238.1|BU998238 HI10G19r HI Hordeum vulgare subsp. v... 394 e-108
gb|BM372616.2|BM372616 EBpi05_SQ003_H10_R pistil, 8 DPA, no... 392 e-108
gb|BF254111.2|BF254111 HVSMEf0003A21f Hordeum vulgare seedl... 387 e-106
gb|AV921513.1|AV921513 AV921513 K. Sato unpublished cDNA li... 387 e-106
gb|AJ460493.1|AJ460493 AJ460493 S00002 Hordeum vulgare subs... 387 e-106
gb|BM097808.2|BM097808 EBem04_SQ002_M06_R embryo, 12 DPA, n... 387 e-106
gb|CA005304.1|CA005304 HU11C14u HU Hordeum vulgare subsp. v... 387 e-106
gb|CA008499.1|CA008499 HU11C14r HU Hordeum vulgare subsp. v... 387 e-106
gb|CB875344.1|CB875344 HX08A07w HX Hordeum vulgare subsp. v... 387 e-106
gb|BF628987.3|BF628987 HVSMEb0009H03f Hordeum vulgare seedl... 385 e-105
gb|AL507449.1|AL507449 AL507449 Hordeum vulgare Barke devel... 379 e-104
gb|BM369172.2|BM369172 EBem07_SQ002_M12_R embryo, 28 DPA, n... 379 e-104
gb|BQ754361.1|BQ754361 EBca01_SQ003_L10_R carpel, pre-anthe... 379 e-104
gb|CB859428.1|CB859428 HI10G19w HI Hordeum vulgare subsp. v... 377 e-103
gb|BM443909.2|BM443909 EBem09_SQ002_A06_R embryo, 1 Day ger... 375 e-102
gb|BM096579.2|BM096579 EBma05_SQ001_M21_R maternal, 12 DPA,... 375 e-102
gb|AL502869.1|AL502869 AL502869 Hordeum vulgare Barke roots... 373 e-102
gb|CB880518.1|CB880518 HM06M18w HM Hordeum vulgare subsp. v... 369 e-101
gb|BQ754589.1|BQ754589 EBed01_SQ003_D22_R endosperm, 6 DPA,... 367 e-100
gb|BI948923.1|BI948923 HVSMEl0011H19f Hordeum vulgare spike... 365 1e-099
gb|BM374957.1|BM374957 EBma05_SQ003_M17_R maternal, 12 DPA,... 365 1e-099
gb|AJ460383.1|AJ460383 AJ460383 S00002 Hordeum vulgare subs... 365 1e-099
gb|BM376688.2|BM376688 EBem05_SQ002_O24_R embryo, 14 DPA, n... 365 1e-099
gb|BQ459994.1|BQ459994 HA07I10r HA Hordeum vulgare subsp. v... 363 5e-099
gb|BQ657658.1|BQ657658 HA07I10u HA Hordeum vulgare subsp. v... 363 5e-099
gb|BI780475.2|BI780475 EBem08_SQ001_F11_R embryo, 40 DPA, n... 361 2e-098
gb|BI778891.2|BI778891 EBro01_SQ001_O16_R root, 3 week, hyd... 361 2e-098
gb|BI777120.2|BI777120 EBro03_SQ002_A15_R root, 3 week, wat... 361 2e-098
gb|BU989673.1|BU989673 HF22G05r HF Hordeum vulgare subsp. v... 357 3e-097
gb|BF266984.3|BF266984 HV_CEa0016J21f Hordeum vulgare seedl... 355 1e-096
gb|BU980000.1|BU980000 HA18C20r HA Hordeum vulgare subsp. v... 355 1e-096
gb|CA004189.1|CA004189 HS16N13r HS Hordeum vulgare subsp. v... 355 1e-096
gb|BJ464965.1|BJ464965 BJ464965 K. Sato unpublished cDNA li... 347 3e-094
gb|BU985219.1|BU985219 HF06H23r HF Hordeum vulgare subsp. v... 341 2e-092
gb|CA016875.1|CA016875 HV05P22u HV Hordeum vulgare subsp. v... 341 2e-092
gb|BI777012.2|BI777012 EBpi03_SQ001_K10_R pistil, 4 DPA, no... 331 2e-089
gb|CA005252.1|CA005252 HU11F06u HU Hordeum vulgare subsp. v... 331 2e-089
gb|BI779727.2|BI779727 EBem05_SQ001_F08_R embryo, 14 DPA, n... 317 3e-085
gb|AJ460380.1|AJ460380 AJ460380 S00002 Hordeum vulgare subs... 315 1e-084
gb|AV920902.1|AV920902 AV920902 K. Sato unpublished cDNA li... 307 3e-082
gb|BG414864.2|BG414864 HVSMEk0004A06f Hordeum vulgare testa... 299 6e-080
gb|BJ466271.1|BJ466271 BJ466271 K. Sato unpublished cDNA li... 299 6e-080
gb|BI779133.2|BI779133 EBro01_SQ003_B18_R root, 3 week, hyd... 285 9e-076
gb|AL510695.1|AL510695 AL510695 Hordeum vulgare Barke devel... 283 4e-075
gb|BU970541.1|BU970541 HB14P08r BC Hordeum vulgare subsp. v... 281 1e-074
gb|BQ469967.1|BQ469967 HX01G04T HX Hordeum vulgare subsp. v... 280 6e-074
gb|BU983425.1|BU983425 HA29L04r HA Hordeum vulgare subsp. v... 276 9e-073
gb|CA027160.1|CA027160 HZ58B05r HZ Hordeum vulgare subsp. v... 270 6e-071
gb|BG416139.2|BG416139 HVSMEk0009O18f Hordeum vulgare testa... 266 9e-070
gb|BQ463146.1|BQ463146 HI04D05r HI Hordeum vulgare subsp. v... 264 3e-069
gb|BU999904.1|BU999904 HS16N13u HS Hordeum vulgare subsp. v... 258 2e-067
gb|BQ664914.1|BQ664914 HX01G04w HX Hordeum vulgare subsp. v... 250 5e-065
gb|AV914889.1|AV914889 AV914889 K. Sato unpublished cDNA li... 244 3e-063
gb|AJ460539.1|AJ460539 AJ460539 S00002 Hordeum vulgare subs... 244 3e-063
gb|BI777222.2|BI777222 EBro03_SQ002_H17_R root, 3 week, wat... 244 3e-063
gb|BU967526.1|BU967526 HB04J10r BC Hordeum vulgare subsp. v... 236 8e-061
gb|AJ460494.1|AJ460494 AJ460494 S00002 Hordeum vulgare subs... 234 3e-060
gb|AJ460381.1|AJ460381 AJ460381 S00002 Hordeum vulgare subs... 228 2e-058
gb|CK123629.1|CK123629 BES1824104m06 BES1824 Hordeum vulgar... 224 3e-057
gb|BQ757335.1|BQ757335 EBem10_SQ003_M04_R embryo, 2 Day ger... 218 2e-055
gb|BU974518.1|BU974518 HB28C21r BC Hordeum vulgare subsp. v... 218 2e-055
gb|BQ764041.1|BQ764041 EBro03_SQ006_I05_R root, 3 week, wat... 216 7e-055
gb|CK123577.1|CK123577 BES1824104i09 BES1824 Hordeum vulgar... 210 4e-053
gb|AJ460538.1|AJ460538 AJ460538 S00002 Hordeum vulgare subs... 202 1e-050
gb|BM377344.1|BM377344 EBem05_SQ004_N13_R embryo, 14 DPA, n... 190 4e-047
gb|BM444780.1|BM444780 EBem09_SQ006_H06_R embryo, 1 Day ger... 182 1e-044
gb|BM368821.1|BM368821 EBem08_SQ004_L05_R embryo, 40 DPA, n... 176 6e-043
gb|BU979540.1|BU979540 HA16H20r HA Hordeum vulgare subsp. v... 165 2e-039
gb|BU981882.1|BU981882 HA24O13r HA Hordeum vulgare subsp. v... 163 9e-039
gb|BM441401.2|BM441401 EBma05_SQ004_C12_R maternal, 12 DPA,... 155 2e-036
gb|BM374355.1|BM374355 EBpi03_SQ003_G09_R pistil, 4 DPA, no... 147 6e-034
gb|BU983580.1|BU983580 HA30D08r HA Hordeum vulgare subsp. v... 147 6e-034
gb|BQ756935.1|BQ756935 EBem10_SQ002_D23_R embryo, 2 Day ger... 145 2e-033
gb|BU980349.1|BU980349 HA20H05r HA Hordeum vulgare subsp. v... 143 9e-033
gb|BE215251.1|BE215251 HV_CEb0006E14f Hordeum vulgare seedl... 139 1e-031
gb|BQ755962.1|BQ755962 EBem04_SQ004_F16_R embryo, 12 DPA, n... 135 2e-030
gb|BU967996.1|BU967996 HB06A09r BC Hordeum vulgare subsp. v... 115 2e-024
gb|BQ761804.1|BQ761804 EBem10_SQ001_M23_R embryo, 2 Day ger... 111 3e-023
gb|AV833590.1|AV833590 AV833590 K. Sato unpublished cDNA li... 52 2e-005
gb|BQ755030.1|BQ755030 EBed02_SQ003_I07_R endosperm, 8 DPA,... 42 0.024
gb|BG369497.1|BG369497 HVSMEi0024K11f Hordeum vulgare 20 DA... 40 0.094
gb|BF267473.2|BF267473 HV_CEa0018A19f Hordeum vulgare seedl... 40 0.094
gb|BM373136.1|BM373136 EBma04_SQ003_D21_R maternal, 10 DPA,... 40 0.094
gb|CA012931.1|CA012931 HT06O04r HT Hordeum vulgare subsp. v... 40 0.094
gb|CA018510.1|CA018510 HV08N12r HV Hordeum vulgare subsp. v... 40 0.094
gb|AU090009.1|AU090009 AU090009 Hordeum vulgare subsp. vulg... 38 0.37
gb|BE420934.1|BE420934 HWM004.A11 ITEC HWM Barley Leaf Libr... 38 0.37
gb|BE437280.1|BE437280 SFR003.C08F990621 ITEC SFR Barley Le... 38 0.37
gb|BE437423.1|BE437423 SFR003.E09F990621 ITEC SFR Barley Le... 38 0.37
gb|BE216110.2|BE216110 HV_CEb0009H09f Hordeum vulgare seedl... 38 0.37
gb|BM377123.1|BM377123 EBem05_SQ004_D05_R embryo, 14 DPA, n... 38 0.37
gb|BM816885.1|BM816885 HC113H03_SK.ab1 HC Hordeum vulgare s... 38 0.37
gb|BQ466704.1|BQ466704 HS01F03T HS Hordeum vulgare subsp. v... 38 0.37
gb|BQ467020.1|BQ467020 HS02F03r HS Hordeum vulgare subsp. v... 38 0.37
gb|BQ469172.1|BQ469172 HM03J22r HM Hordeum vulgare subsp. v... 38 0.37
gb|BM369793.2|BM369793 EBem07_SQ004_K03_R embryo, 28 DPA, n... 38 0.37
gb|BU995535.1|BU995535 HM10I19r HM Hordeum vulgare subsp. v... 38 0.37
gb|BU996713.1|BU996713 HM14I03r HM Hordeum vulgare subsp. v... 38 0.37
gb|CB877338.1|CB877338 HP04H20T HP Hordeum vulgare subsp. v... 38 0.37
gb|CB878084.1|CB878084 HP07E12T HP Hordeum vulgare subsp. v... 38 0.37
gb|CB878515.1|CB878515 HP08N02T HP Hordeum vulgare subsp. v... 38 0.37
gb|CD662312.1|CD662312 UCRHV18_01bh09_b1 Drought-stressed D... 38 0.37
gb|CD663411.1|CD663411 UCRHV18_05bf04_b1 Drought-stressed D... 38 0.37
>gb|AJ460382.1|AJ460382 AJ460382 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200032B11F1, mRNA sequence
Length = 480
Score = 454 bits (229), Expect = e-126
Identities = 376/425 (88%)
Strand = Plus / Plus
Query: 66 caaaatgccgttcaagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaa 125
||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||
Sbjct: 20 caaaatgccgttcaagaggtttgtggagatcgggcgggtggccctggtgaactacggcaa 79
Query: 126 ggagtatggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtgga 185
||| || |||||||||||||||||||||||||| ||||||||||||||||| ||| | ||
Sbjct: 80 ggactacggccgcctcgtcgtcatcgtcgacgttgtcgaccagaacagggcacttattga 139
Query: 186 tgcccccgacatggttcgttgccaaatgaacttcaagcggctttccctgactgacatcaa 245
||| || |||||| | || ||||| ||||||||||||||||| |||||||| ||||||||
Sbjct: 140 tgcaccggacatgatccgctgccagatgaacttcaagcggctctccctgaccgacatcaa 199
Query: 246 gattgacattaaacgtgtcccaaagaagactacactgatcaaggcaatggaggaagctga 305
||||||||| || || |||| |||||| | || |||||||| || ||||||||||||||
Sbjct: 200 gattgacatcaagcggatccctaagaaggcaactctgatcaaagctatggaggaagctga 259
Query: 306 tgtgaaaagcaagtgggagaatagctcatggggcaagaagctgattgttcagaagaggag 365
|||||| | |||||||||||| || ||||||||||||||||||||||| |||||||||||
Sbjct: 260 tgtgaagaccaagtgggagaacagttcatggggcaagaagctgattgtccagaagaggag 319
Query: 366 agcatcactcaatgactttgacaggttcaaggtcatgttggcgaagatcaagaggggtgg 425
||||| |||||||||||||||||||||||||||||| | || |||||||||||||| ||
Sbjct: 320 ggcatcgctcaatgactttgacaggttcaaggtcatgcttgccaagatcaagaggggagg 379
Query: 426 tgccatcaggcaagagcttgctaagcttaaaaaggtggctgctgctgcttagattgcttt 485
|| |||||||| ||||| || |||||||| |||| || ||| ||||||||||| ||||
Sbjct: 380 agctatcaggcaggagctagcgaagcttaagaaggaggttgccgctgcttagatcacttt 439
Query: 486 ggtgg 490
|||||
Sbjct: 440 ggtgg 444
>gb|BF263456.3|BF263456 HV_CEa0006M17f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0006M17f, mRNA sequence
Length = 587
Score = 450 bits (227), Expect = e-125
Identities = 374/423 (88%)
Strand = Plus / Plus
Query: 68 aaatgccgttcaagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaagg 127
||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||
Sbjct: 55 aaatgccgttcaagaggtttgtggagatcgggcgggtggccctggtgaactacggcaagg 114
Query: 128 agtatggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatg 187
| || |||||||||||||||||||||||||| ||||||||||||||||| ||| | ||||
Sbjct: 115 actacggccgcctcgtcgtcatcgtcgacgttgtcgaccagaacagggcacttattgatg 174
Query: 188 cccccgacatggttcgttgccaaatgaacttcaagcggctttccctgactgacatcaaga 247
| || |||||| | || ||||| ||||||||||||||||| |||||||| ||||||||||
Sbjct: 175 caccggacatgatccgctgccagatgaacttcaagcggctctccctgaccgacatcaaga 234
Query: 248 ttgacattaaacgtgtcccaaagaagactacactgatcaaggcaatggaggaagctgatg 307
||||||| || || |||| |||||| | || |||||||| || ||||||||||||||||
Sbjct: 235 ttgacatcaagcggatccctaagaaggcaactctgatcaaagctatggaggaagctgatg 294
Query: 308 tgaaaagcaagtgggagaatagctcatggggcaagaagctgattgttcagaagaggagag 367
|||| | |||||||||||| || ||||||||||||||||||||||| ||||||||||| |
Sbjct: 295 tgaagaccaagtgggagaacagttcatggggcaagaagctgattgtccagaagaggaggg 354
Query: 368 catcactcaatgactttgacaggttcaaggtcatgttggcgaagatcaagaggggtggtg 427
|||| |||||||||||||||||||||||||||||| | || |||||||||||||| || |
Sbjct: 355 catcgctcaatgactttgacaggttcaaggtcatgcttgccaagatcaagaggggaggag 414
Query: 428 ccatcaggcaagagcttgctaagcttaaaaaggtggctgctgctgcttagattgctttgg 487
| |||||||| ||||| || |||||||| |||| || ||| ||||||||||| ||||||
Sbjct: 415 ctatcaggcatgagctagcgaagcttaagaaggaggttgccgctgcttagatcactttgg 474
Query: 488 tgg 490
|||
Sbjct: 475 tgg 477
>gb|BQ657133.1|BQ657133 HA09I10u HA Hordeum vulgare subsp. vulgare cDNA clone HA09I10
3-PRIME, mRNA sequence
Length = 605
Score = 450 bits (227), Expect = e-125
Identities = 374/423 (88%)
Strand = Plus / Plus
Query: 68 aaatgccgttcaagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaagg 127
||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||
Sbjct: 75 aaatgccgttcaagaggtttgtggagatcgggcgggtggccctggtgaactacggcaagg 134
Query: 128 agtatggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatg 187
| || |||||||||||||||||||||||||| ||||||||||||||||| ||| | ||||
Sbjct: 135 actacggccgcctcgtcgtcatcgtcgacgttgtcgaccagaacagggcacttattgatg 194
Query: 188 cccccgacatggttcgttgccaaatgaacttcaagcggctttccctgactgacatcaaga 247
| || |||||| | || ||||| ||||||||||||||||| |||||||| ||||||||||
Sbjct: 195 caccggacatgatccgctgccagatgaacttcaagcggctctccctgaccgacatcaaga 254
Query: 248 ttgacattaaacgtgtcccaaagaagactacactgatcaaggcaatggaggaagctgatg 307
||||||| || || |||| |||||| | || |||||||| || ||||||||||||||||
Sbjct: 255 ttgacatcaagcggatccctaagaaggcaactctgatcaaagctatggaggaagctgatg 314
Query: 308 tgaaaagcaagtgggagaatagctcatggggcaagaagctgattgttcagaagaggagag 367
|||| | |||||||||||| || ||||||||||||||||||||||| ||||||||||| |
Sbjct: 315 tgaagaccaagtgggagaacagttcatggggcaagaagctgattgtccagaagaggaggg 374
Query: 368 catcactcaatgactttgacaggttcaaggtcatgttggcgaagatcaagaggggtggtg 427
|||| |||||||||||||||||||||||||||||| | || |||||||||||||| || |
Sbjct: 375 catcgctcaatgactttgacaggttcaaggtcatgcttgccaagatcaagaggggaggag 434
Query: 428 ccatcaggcaagagcttgctaagcttaaaaaggtggctgctgctgcttagattgctttgg 487
| |||||||| ||||| || |||||||| |||| || ||| ||||||||||| ||||||
Sbjct: 435 ctatcaggcaggagctagcgaagcttaagaaggaggttgccgctgcttagatcactttgg 494
Query: 488 tgg 490
|||
Sbjct: 495 tgg 497
>gb|BI780084.2|BI780084 EBma08_SQ001_F19_R maternal, 28 DPA, no treatment, cv Optic, EBma08
Hordeum vulgare subsp. vulgare cDNA clone
EBma08_SQ001_F19 5', mRNA sequence
Length = 595
Score = 450 bits (227), Expect = e-125
Identities = 374/423 (88%)
Strand = Plus / Plus
Query: 68 aaatgccgttcaagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaagg 127
||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||
Sbjct: 79 aaatgccgttcaagaggtttgtggagatcgggcgggtggccctggtgaactacggcaagg 138
Query: 128 agtatggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatg 187
| || |||||||||||||||||||||||||| ||||||||||||||||| ||| | ||||
Sbjct: 139 actacggccgcctcgtcgtcatcgtcgacgttgtcgaccagaacagggcacttattgatg 198
Query: 188 cccccgacatggttcgttgccaaatgaacttcaagcggctttccctgactgacatcaaga 247
| || |||||| | || ||||| ||||||||||||||||| |||||||| ||||||||||
Sbjct: 199 caccggacatgatccgctgccagatgaacttcaagcggctctccctgaccgacatcaaga 258
Query: 248 ttgacattaaacgtgtcccaaagaagactacactgatcaaggcaatggaggaagctgatg 307
||||||| || || |||| |||||| | || |||||||| || ||||||||||||||||
Sbjct: 259 ttgacatcaagcggatccctaagaaggcaactctgatcaaagctatggaggaagctgatg 318
Query: 308 tgaaaagcaagtgggagaatagctcatggggcaagaagctgattgttcagaagaggagag 367
|||| | |||||||||||| || ||||||||||||||||||||||| ||||||||||| |
Sbjct: 319 tgaagaccaagtgggagaacagttcatggggcaagaagctgattgtccagaagaggaggg 378
Query: 368 catcactcaatgactttgacaggttcaaggtcatgttggcgaagatcaagaggggtggtg 427
|||| |||||||||||||||||||||||||||||| | || |||||||||||||| || |
Sbjct: 379 catcgctcaatgactttgacaggttcaaggtcatgcttgccaagatcaagaggggaggag 438
Query: 428 ccatcaggcaagagcttgctaagcttaaaaaggtggctgctgctgcttagattgctttgg 487
| |||||||| ||||| || |||||||| |||| || ||| ||||||||||| ||||||
Sbjct: 439 ctatcaggcaggagctagcgaagcttaagaaggaggttgccgctgcttagatcactttgg 498
Query: 488 tgg 490
|||
Sbjct: 499 tgg 501
>gb|BM370559.2|BM370559 EBro08_SQ004_J13_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ004_J13 5', mRNA sequence
Length = 595
Score = 450 bits (227), Expect = e-125
Identities = 374/423 (88%)
Strand = Plus / Plus
Query: 68 aaatgccgttcaagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaagg 127
||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||
Sbjct: 74 aaatgccgttcaagaggtttgtggagatcgggcgggtggccctggtgaactacggcaagg 133
Query: 128 agtatggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatg 187
| || |||||||||||||||||||||||||| ||||||||||||||||| ||| | ||||
Sbjct: 134 actacggccgcctcgtcgtcatcgtcgacgttgtcgaccagaacagggcacttattgatg 193
Query: 188 cccccgacatggttcgttgccaaatgaacttcaagcggctttccctgactgacatcaaga 247
| || |||||| | || ||||| ||||||||||||||||| |||||||| ||||||||||
Sbjct: 194 caccggacatgatccgctgccagatgaacttcaagcggctctccctgaccgacatcaaga 253
Query: 248 ttgacattaaacgtgtcccaaagaagactacactgatcaaggcaatggaggaagctgatg 307
||||||| || || |||| |||||| | || |||||||| || ||||||||||||||||
Sbjct: 254 ttgacatcaagcggatccctaagaaggcaactctgatcaaagctatggaggaagctgatg 313
Query: 308 tgaaaagcaagtgggagaatagctcatggggcaagaagctgattgttcagaagaggagag 367
|||| | |||||||||||| || ||||||||||||||||||||||| ||||||||||| |
Sbjct: 314 tgaagaccaagtgggagaacagttcatggggcaagaagctgattgtccagaagaggaggg 373
Query: 368 catcactcaatgactttgacaggttcaaggtcatgttggcgaagatcaagaggggtggtg 427
|||| |||||||||||||||||||||||||||||| | || |||||||||||||| || |
Sbjct: 374 catcgctcaatgactttgacaggttcaaggtcatgcttgccaagatcaagaggggaggag 433
Query: 428 ccatcaggcaagagcttgctaagcttaaaaaggtggctgctgctgcttagattgctttgg 487
| |||||||| ||||| || |||||||| |||| || ||| ||||||||||| ||||||
Sbjct: 434 ctatcaggcaggagctagcgaagcttaagaaggaggttgccgctgcttagatcactttgg 493
Query: 488 tgg 490
|||
Sbjct: 494 tgg 496
>gb|BQ759446.1|BQ759446 EBpi01_SQ004_E14_R pistil, 1 DPA, no treatment, cv Optic, EBpi01
Hordeum vulgare subsp. vulgare cDNA clone
EBpi01_SQ004_E14 5', mRNA sequence
Length = 570
Score = 450 bits (227), Expect = e-125
Identities = 374/423 (88%)
Strand = Plus / Plus
Query: 68 aaatgccgttcaagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaagg 127
||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||
Sbjct: 81 aaatgccgttcaagaggtttgtggagatcgggcgggtggccctggtgaactacggcaagg 140
Query: 128 agtatggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatg 187
| || |||||||||||||||||||||||||| ||||||||||||||||| ||| | ||||
Sbjct: 141 actacggccgcctcgtcgtcatcgtcgacgttgtcgaccagaacagggcacttattgatg 200
Query: 188 cccccgacatggttcgttgccaaatgaacttcaagcggctttccctgactgacatcaaga 247
| || |||||| | || ||||| ||||||||||||||||| |||||||| ||||||||||
Sbjct: 201 caccggacatgatccgctgccagatgaacttcaagcggctctccctgaccgacatcaaga 260
Query: 248 ttgacattaaacgtgtcccaaagaagactacactgatcaaggcaatggaggaagctgatg 307
||||||| || || |||| |||||| | || |||||||| || ||||||||||||||||
Sbjct: 261 ttgacatcaagcggatccctaagaaggcaactctgatcaaagctatggaggaagctgatg 320
Query: 308 tgaaaagcaagtgggagaatagctcatggggcaagaagctgattgttcagaagaggagag 367
|||| | |||||||||||| || ||||||||||||||||||||||| ||||||||||| |
Sbjct: 321 tgaagaccaagtgggagaacagttcatggggcaagaagctgattgtccagaagaggaggg 380
Query: 368 catcactcaatgactttgacaggttcaaggtcatgttggcgaagatcaagaggggtggtg 427
|||| |||||||||||||||||||||||||||||| | || |||||||||||||| || |
Sbjct: 381 catcgctcaatgactttgacaggttcaaggtcatgcttgccaagatcaagaggggaggag 440
Query: 428 ccatcaggcaagagcttgctaagcttaaaaaggtggctgctgctgcttagattgctttgg 487
| |||||||| ||||| || |||||||| |||| || ||| ||||||||||| ||||||
Sbjct: 441 ctatcaggcaggagctagcgaagcttaagaaggaggttgccgctgcttagatcactttgg 500
Query: 488 tgg 490
|||
Sbjct: 501 tgg 503
>gb|BU977241.1|BU977241 HA11B09u HA Hordeum vulgare subsp. vulgare cDNA clone HA11B09
3-PRIME, mRNA sequence
Length = 563
Score = 450 bits (227), Expect = e-125
Identities = 374/423 (88%)
Strand = Plus / Minus
Query: 68 aaatgccgttcaagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaagg 127
||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||
Sbjct: 531 aaatgccgttcaagaggtttgtggagatcgggcgggtggccctggtgaactacggcaagg 472
Query: 128 agtatggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatg 187
| || |||||||||||||||||||||||||| ||||||||||||||||| ||| | ||||
Sbjct: 471 actacggccgcctcgtcgtcatcgtcgacgttgtcgaccagaacagggcacttattgatg 412
Query: 188 cccccgacatggttcgttgccaaatgaacttcaagcggctttccctgactgacatcaaga 247
| || |||||| | || ||||| ||||||||||||||||| |||||||| ||||||||||
Sbjct: 411 caccggacatgatccgctgccagatgaacttcaagcggctctccctgaccgacatcaaga 352
Query: 248 ttgacattaaacgtgtcccaaagaagactacactgatcaaggcaatggaggaagctgatg 307
||||||| || || |||| |||||| | || |||||||| || ||||||||||||||||
Sbjct: 351 ttgacatcaagcggatccctaagaaggcaactctgatcaaagctatggaggaagctgatg 292
Query: 308 tgaaaagcaagtgggagaatagctcatggggcaagaagctgattgttcagaagaggagag 367
|||| | |||||||||||| || ||||||||||||||||||||||| ||||||||||| |
Sbjct: 291 tgaagaccaagtgggagaacagttcatggggcaagaagctgattgtccagaagaggaggg 232
Query: 368 catcactcaatgactttgacaggttcaaggtcatgttggcgaagatcaagaggggtggtg 427
|||| |||||||||||||||||||||||||||||| | || |||||||||||||| || |
Sbjct: 231 catcgctcaatgactttgacaggttcaaggtcatgcttgccaagatcaagaggggaggag 172
Query: 428 ccatcaggcaagagcttgctaagcttaaaaaggtggctgctgctgcttagattgctttgg 487
| |||||||| ||||| || |||||||| |||| || ||| ||||||||||| ||||||
Sbjct: 171 ctatcaggcaggagctagcgaagcttaagaaggaggttgccgctgcttagatcactttgg 112
Query: 488 tgg 490
|||
Sbjct: 111 tgg 109
>gb|CA030768.1|CA030768 HX08B07r HX Hordeum vulgare subsp. vulgare cDNA clone HX08B07
5-PRIME, mRNA sequence
Length = 641
Score = 450 bits (227), Expect = e-125
Identities = 374/423 (88%)
Strand = Plus / Plus
Query: 68 aaatgccgttcaagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaagg 127
||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||
Sbjct: 85 aaatgccgttcaagaggtttgtggagatcgggcgggtggccctggtgaactacggcaagg 144
Query: 128 agtatggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatg 187
| || |||||||||||||||||||||||||| ||||||||||||||||| ||| | ||||
Sbjct: 145 actacggccgcctcgtcgtcatcgtcgacgttgtcgaccagaacagggcacttattgatg 204
Query: 188 cccccgacatggttcgttgccaaatgaacttcaagcggctttccctgactgacatcaaga 247
| || |||||| | || ||||| ||||||||||||||||| |||||||| ||||||||||
Sbjct: 205 caccggacatgatccgctgccagatgaacttcaagcggctctccctgaccgacatcaaga 264
Query: 248 ttgacattaaacgtgtcccaaagaagactacactgatcaaggcaatggaggaagctgatg 307
||||||| || || |||| |||||| | || |||||||| || ||||||||||||||||
Sbjct: 265 ttgacatcaagcggatccctaagaaggcaactctgatcaaagctatggaggaagctgatg 324
Query: 308 tgaaaagcaagtgggagaatagctcatggggcaagaagctgattgttcagaagaggagag 367
|||| | |||||||||||| || ||||||||||||||||||||||| ||||||||||| |
Sbjct: 325 tgaagaccaagtgggagaacagttcatggggcaagaagctgattgtccagaagaggaggg 384
Query: 368 catcactcaatgactttgacaggttcaaggtcatgttggcgaagatcaagaggggtggtg 427
|||| |||||||||||||||||||||||||||||| | || |||||||||||||| || |
Sbjct: 385 catcgctcaatgactttgacaggttcaaggtcatgcttgccaagatcaagaggggaggag 444
Query: 428 ccatcaggcaagagcttgctaagcttaaaaaggtggctgctgctgcttagattgctttgg 487
| |||||||| ||||| || |||||||| |||| || ||| ||||||||||| ||||||
Sbjct: 445 ctatcaggcaggagctagcgaagcttaagaaggaggttgccgctgcttagatcactttgg 504
Query: 488 tgg 490
|||
Sbjct: 505 tgg 507
>gb|CB874514.1|CB874514 HX05H22w HX Hordeum vulgare subsp. vulgare cDNA clone HX05H22
3-PRIME, mRNA sequence
Length = 569
Score = 450 bits (227), Expect = e-125
Identities = 374/423 (88%)
Strand = Plus / Minus
Query: 68 aaatgccgttcaagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaagg 127
||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||
Sbjct: 551 aaatgccgttcaagaggtttgtggagatcgggcgggtggccctggtgaactacggcaagg 492
Query: 128 agtatggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatg 187
| || |||||||||||||||||||||||||| ||||||||||||||||| ||| | ||||
Sbjct: 491 actacggccgcctcgtcgtcatcgtcgacgttgtcgaccagaacagggcacttattgatg 432
Query: 188 cccccgacatggttcgttgccaaatgaacttcaagcggctttccctgactgacatcaaga 247
| || |||||| | || ||||| ||||||||||||||||| |||||||| ||||||||||
Sbjct: 431 caccggacatgatccgctgccagatgaacttcaagcggctctccctgaccgacatcaaga 372
Query: 248 ttgacattaaacgtgtcccaaagaagactacactgatcaaggcaatggaggaagctgatg 307
||||||| || || |||| |||||| | || |||||||| || ||||||||||||||||
Sbjct: 371 ttgacatcaagcggatccctaagaaggcaactctgatcaaagctatggaggaagctgatg 312
Query: 308 tgaaaagcaagtgggagaatagctcatggggcaagaagctgattgttcagaagaggagag 367
|||| | |||||||||||| || ||||||||||||||||||||||| ||||||||||| |
Sbjct: 311 tgaagaccaagtgggagaacagttcatggggcaagaagctgattgtccagaagaggaggg 252
Query: 368 catcactcaatgactttgacaggttcaaggtcatgttggcgaagatcaagaggggtggtg 427
|||| |||||||||||||||||||||||||||||| | || |||||||||||||| || |
Sbjct: 251 catcgctcaatgactttgacaggttcaaggtcatgcttgccaagatcaagaggggaggag 192
Query: 428 ccatcaggcaagagcttgctaagcttaaaaaggtggctgctgctgcttagattgctttgg 487
| |||||||| ||||| || |||||||| |||| || ||| ||||||||||| ||||||
Sbjct: 191 ctatcaggcaggagctagcgaagcttaagaaggaggttgccgctgcttagatcactttgg 132
Query: 488 tgg 490
|||
Sbjct: 131 tgg 129
>gb|CV063549.1|CV063549 BNEL90e7 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL90e7 5' similar to
OSJNBb0072M01.9, mRNA sequence
Length = 609
Score = 450 bits (227), Expect = e-125
Identities = 374/423 (88%)
Strand = Plus / Plus
Query: 68 aaatgccgttcaagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaagg 127
||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||
Sbjct: 80 aaatgccgttcaagaggtttgtggagatcgggcgggtggccctggtgaactacggcaagg 139
Query: 128 agtatggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatg 187
| || |||||||||||||||||||||||||| ||||||||||||||||| ||| | ||||
Sbjct: 140 actacggccgcctcgtcgtcatcgtcgacgttgtcgaccagaacagggcacttattgatg 199
Query: 188 cccccgacatggttcgttgccaaatgaacttcaagcggctttccctgactgacatcaaga 247
| || |||||| | || ||||| ||||||||||||||||| |||||||| ||||||||||
Sbjct: 200 caccggacatgatccgctgccagatgaacttcaagcggctctccctgaccgacatcaaga 259
Query: 248 ttgacattaaacgtgtcccaaagaagactacactgatcaaggcaatggaggaagctgatg 307
||||||| || || |||| |||||| | || |||||||| || ||||||||||||||||
Sbjct: 260 ttgacatcaagcggatccctaagaaggcaactctgatcaaagctatggaggaagctgatg 319
Query: 308 tgaaaagcaagtgggagaatagctcatggggcaagaagctgattgttcagaagaggagag 367
|||| | |||||||||||| || ||||||||||||||||||||||| ||||||||||| |
Sbjct: 320 tgaagaccaagtgggagaacagttcatggggcaagaagctgattgtccagaagaggaggg 379
Query: 368 catcactcaatgactttgacaggttcaaggtcatgttggcgaagatcaagaggggtggtg 427
|||| |||||||||||||||||||||||||||||| | || |||||||||||||| || |
Sbjct: 380 catcgctcaatgactttgacaggttcaaggtcatgcttgccaagatcaagaggggaggag 439
Query: 428 ccatcaggcaagagcttgctaagcttaaaaaggtggctgctgctgcttagattgctttgg 487
| |||||||| ||||| || |||||||| |||| || ||| ||||||||||| ||||||
Sbjct: 440 ctatcaggcaggagctagcgaagcttaagaaggaggttgccgctgcttagatcactttgg 499
Query: 488 tgg 490
|||
Sbjct: 500 tgg 502
>gb|CK123864.1|CK123864 BES1824105n20 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010N205 5-PRIME, mRNA sequence
Length = 681
Score = 450 bits (227), Expect = e-125
Identities = 374/423 (88%)
Strand = Plus / Plus
Query: 68 aaatgccgttcaagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaagg 127
||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||
Sbjct: 105 aaatgccgttcaagaggtttgtggagatcgggcgggtggccctggtgaactacggcaagg 164
Query: 128 agtatggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatg 187
| || |||||||||||||||||||||||||| ||||||||||||||||| ||| | ||||
Sbjct: 165 actacggccgcctcgtcgtcatcgtcgacgttgtcgaccagaacagggcacttattgatg 224
Query: 188 cccccgacatggttcgttgccaaatgaacttcaagcggctttccctgactgacatcaaga 247
| || |||||| | || ||||| ||||||||||||||||| |||||||| ||||||||||
Sbjct: 225 caccggacatgatccgctgccagatgaacttcaagcggctctccctgaccgacatcaaga 284
Query: 248 ttgacattaaacgtgtcccaaagaagactacactgatcaaggcaatggaggaagctgatg 307
||||||| || || |||| |||||| | || |||||||| || ||||||||||||||||
Sbjct: 285 ttgacatcaagcggatccctaagaaggcaactctgatcaaagctatggaggaagctgatg 344
Query: 308 tgaaaagcaagtgggagaatagctcatggggcaagaagctgattgttcagaagaggagag 367
|||| | |||||||||||| || ||||||||||||||||||||||| ||||||||||| |
Sbjct: 345 tgaagaccaagtgggagaacagttcatggggcaagaagctgattgtccagaagaggaggg 404
Query: 368 catcactcaatgactttgacaggttcaaggtcatgttggcgaagatcaagaggggtggtg 427
|||| |||||||||||||||||||||||||||||| | || |||||||||||||| || |
Sbjct: 405 catcgctcaatgactttgacaggttcaaggtcatgcttgccaagatcaagaggggaggag 464
Query: 428 ccatcaggcaagagcttgctaagcttaaaaaggtggctgctgctgcttagattgctttgg 487
| |||||||| ||||| || |||||||| |||| || ||| ||||||||||| ||||||
Sbjct: 465 ctatcaggcaggagctagcgaagcttaagaaggaggttgccgctgcttagatcactttgg 524
Query: 488 tgg 490
|||
Sbjct: 525 tgg 527
>gb|BG344422.1|BG344422 HVSMEg0009D14f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0009D14f, mRNA sequence
Length = 811
Score = 448 bits (226), Expect = e-124
Identities = 375/425 (88%)
Strand = Plus / Plus
Query: 66 caaaatgccgttcaagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaa 125
||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||
Sbjct: 29 caaaatgccgttcaagaggtttgtggagatcgggcgggtggccctggtgaactacggcaa 88
Query: 126 ggagtatggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtgga 185
||| || |||||||||||||||||||||||||| ||||||||||||||||| ||| | ||
Sbjct: 89 ggactacggccgcctcgtcgtcatcgtcgacgttgtcgaccagaacagggcacttattga 148
Query: 186 tgcccccgacatggttcgttgccaaatgaacttcaagcggctttccctgactgacatcaa 245
||| || |||||| | || ||||| ||||||||||||||||| |||||||| ||||||||
Sbjct: 149 tgcaccggacatgatccgctgccagatgaacttcaagcggctctccctgaccgacatcaa 208
Query: 246 gattgacattaaacgtgtcccaaagaagactacactgatcaaggcaatggaggaagctga 305
||||||||| || || |||| |||||| | || |||||||| || ||||||||||||||
Sbjct: 209 gattgacatcaagcggatccctaagaaggcaactctgatcaaagctatggaggaagctga 268
Query: 306 tgtgaaaagcaagtgggagaatagctcatggggcaagaagctgattgttcagaagaggag 365
|||||| | |||||||||||| || ||||||||||||||||||||||| |||||||||||
Sbjct: 269 tgtgaagaccaagtgggagaacagttcatggggcaagaagctgattgtccagaagaggag 328
Query: 366 agcatcactcaatgactttgacaggttcaaggtcatgttggcgaagatcaagaggggtgg 425
||||| |||||||||||||||||||||||||||||| | || |||||||||||||| ||
Sbjct: 329 ggcatcgctcaatgactttgacaggttcaaggtcatgcttgccaagatcaagaggggagg 388
Query: 426 tgccatcaggcaagagcttgctaagcttaaaaaggtggctgctgctgcttagattgcttt 485
|| |||||||| ||||| || |||||||| |||| || ||| |||||||| || ||||
Sbjct: 389 agctatcaggcaggagctagcgaagcttaagaaggaggttgccgctgcttanatcacttt 448
Query: 486 ggtgg 490
|||||
Sbjct: 449 ggtgg 453
>gb|BQ460332.1|BQ460332 HA06I23r HA Hordeum vulgare subsp. vulgare cDNA clone HA06I23
5-PRIME, mRNA sequence
Length = 615
Score = 444 bits (224), Expect = e-123
Identities = 373/423 (88%)
Strand = Plus / Plus
Query: 68 aaatgccgttcaagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaagg 127
||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||
Sbjct: 44 aaatgccgttcaagaggtttgtggagatcgggcgggtggccctggtgaactacggcaagg 103
Query: 128 agtatggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatg 187
| || |||||||||||||||||||||||||| ||||||||||||||||| ||| | ||||
Sbjct: 104 actacggccgcctcgtcgtcatcgtcgacgttgtcgaccagaacagggcacttattgatg 163
Query: 188 cccccgacatggttcgttgccaaatgaacttcaagcggctttccctgactgacatcaaga 247
| || |||||| | || ||||| ||||||||||||||||| |||||||| ||||||||||
Sbjct: 164 caccggacatgatccgctgccagatgaacttcaagcggctctccctgaccgacatcaaga 223
Query: 248 ttgacattaaacgtgtcccaaagaagactacactgatcaaggcaatggaggaagctgatg 307
||||||| || || |||| |||||| | || |||||||| || ||||||||||||||||
Sbjct: 224 ttgacatcaagcggatccctaagaaggcaactctgatcaaagctatggaggaagctgatg 283
Query: 308 tgaaaagcaagtgggagaatagctcatggggcaagaagctgattgttcagaagaggagag 367
|||| | |||||||||||| || ||||||||||||||||||||||| ||||||||||| |
Sbjct: 284 tgaagaccaagtgggagaacagttcatggggcaagaagctgattgtccagaagaggaggg 343
Query: 368 catcactcaatgactttgacaggttcaaggtcatgttggcgaagatcaagaggggtggtg 427
|||| |||||||||||||||||||||||||||||| | || |||||||||||||| || |
Sbjct: 344 catcgctcaatgactttgacaggttcaaggtcatgcttgccaagatcaagaggggaggag 403
Query: 428 ccatcaggcaagagcttgctaagcttaaaaaggtggctgctgctgcttagattgctttgg 487
| |||||||| ||||| || |||||||| |||| || ||| |||||||| || ||||||
Sbjct: 404 ctatcaggcaggagctagcgaagcttaagaaggaggttgccgctgcttanatcactttgg 463
Query: 488 tgg 490
|||
Sbjct: 464 tgg 466
>gb|BM377568.2|BM377568 EBem04_SQ003_I13_R embryo, 12 DPA, no treatment, cv Optic, EBem04
Hordeum vulgare subsp. vulgare cDNA clone
EBem04_SQ003_I13 5', mRNA sequence
Length = 591
Score = 444 bits (224), Expect = e-123
Identities = 373/423 (88%)
Strand = Plus / Plus
Query: 68 aaatgccgttcaagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaagg 127
||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||
Sbjct: 74 aaatgccgttcaagaggtttgtggagatcgggcgggtggccctggtgaactacggcaagg 133
Query: 128 agtatggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatg 187
| || |||||||||||||||||||||||||| ||||||||||||||||| ||| | ||||
Sbjct: 134 actacggccgcctcgtcgtcatcgtcgacgttgtcgaccagaacagggcacttattgatg 193
Query: 188 cccccgacatggttcgttgccaaatgaacttcaagcggctttccctgactgacatcaaga 247
| || |||||| | || ||||| ||||||||||||||||| |||||||| ||||||||||
Sbjct: 194 caccggacatgatccgctgccagatgaacttcaagcggctctccctgaccgacatcaaga 253
Query: 248 ttgacattaaacgtgtcccaaagaagactacactgatcaaggcaatggaggaagctgatg 307
||||||| || || |||| |||||| | || |||||||| || ||||||||||||||||
Sbjct: 254 ttgacatcaagcggatccctaagaaggcaactctgatcaaagctatggaggaagctgatg 313
Query: 308 tgaaaagcaagtgggagaatagctcatggggcaagaagctgattgttcagaagaggagag 367
|||| | |||||||||||| || ||||||||||||||||||||||| ||||||||||| |
Sbjct: 314 tgaagaccaagtgggagaacagttcatggggcaagaagctgattgtccagaagaggaggg 373
Query: 368 catcactcaatgactttgacaggttcaaggtcatgttggcgaagatcaagaggggtggtg 427
|||| |||||||||||||||||||||||||||||| | || |||||||||||||| || |
Sbjct: 374 catcgctcaatgactttgacaggttcaaggtcatgcttgccaagatcaagaggggaggag 433
Query: 428 ccatcaggcaagagcttgctaagcttaaaaaggtggctgctgctgcttagattgctttgg 487
| |||||||| ||||| || |||||||| |||| || ||| |||||||| || ||||||
Sbjct: 434 ctatcaggcaggagctagcgaagcttaagaaggaggttgccgctgcttanatcactttgg 493
Query: 488 tgg 490
|||
Sbjct: 494 tgg 496
>gb|BM376611.2|BM376611 EBem05_SQ002_L09_R embryo, 14 DPA, no treatment, cv Optic, EBem05
Hordeum vulgare subsp. vulgare cDNA clone
EBem05_SQ002_L09 5', mRNA sequence
Length = 581
Score = 444 bits (224), Expect = e-123
Identities = 373/423 (88%)
Strand = Plus / Plus
Query: 68 aaatgccgttcaagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaagg 127
||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||
Sbjct: 69 aaatgccgttcaagaggtttgtggagatcgggcgggtggccctggtgaactacggcaagg 128
Query: 128 agtatggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatg 187
| || |||||||||||||||||||||||||| ||||||||||||||||| ||| | ||||
Sbjct: 129 actacggccgcctcgtcgtcatcgtcgacgttgtcgaccagaacagggcacttattgatg 188
Query: 188 cccccgacatggttcgttgccaaatgaacttcaagcggctttccctgactgacatcaaga 247
| || |||||| | || ||||| ||||||||||||||||| |||||||| ||||||||||
Sbjct: 189 caccggacatgatccgctgccagatgaacttcaagcggctctccctgaccgacatcaaga 248
Query: 248 ttgacattaaacgtgtcccaaagaagactacactgatcaaggcaatggaggaagctgatg 307
||||||| || || |||| |||||| | || |||||||| || ||||||||||||||||
Sbjct: 249 ttgacatcaagcggatccctaagaaggcaactctgatcaaagctatggaggaagctgatg 308
Query: 308 tgaaaagcaagtgggagaatagctcatggggcaagaagctgattgttcagaagaggagag 367
|||| | |||||||||||| || ||||||||||||||||||||||| ||||||||||| |
Sbjct: 309 tgaagaccaagtgggagaacagttcatggggcaagaagctgattgtccagaagaggaggg 368
Query: 368 catcactcaatgactttgacaggttcaaggtcatgttggcgaagatcaagaggggtggtg 427
|||| |||||||||||||||||||||||||||||| | || |||||||||||||| || |
Sbjct: 369 catcgctcaatgactttgacaggttcaaggtcatgcttgccaagatcaagaggggaggag 428
Query: 428 ccatcaggcaagagcttgctaagcttaaaaaggtggctgctgctgcttagattgctttgg 487
| |||||||| ||||| || |||||||| |||| || ||| |||||||| || ||||||
Sbjct: 429 ctatcaggcaggagctagcgaagcttaagaaggaggttgccgctgcttanatcactttgg 488
Query: 488 tgg 490
|||
Sbjct: 489 tgg 491
>gb|BQ764353.1|BQ764353 EBan01_SQ005_I17_R anther, yellow stage, no treatment, cv Optic,
EBan01 Hordeum vulgare subsp. vulgare cDNA clone
EBan01_SQ005_I17 5', mRNA sequence
Length = 621
Score = 444 bits (224), Expect = e-123
Identities = 373/423 (88%)
Strand = Plus / Plus
Query: 68 aaatgccgttcaagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaagg 127
||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||
Sbjct: 59 aaatgccgttcaagaggtttgtggagatcgggcgggtggccctggtgaactacggcaagg 118
Query: 128 agtatggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatg 187
| || |||||||||||||||||||||||||| ||||||||||||||||| ||| | ||||
Sbjct: 119 actacggccgcctcgtcgtcatcgtcgacgttgtcgaccagaacagggcacttattgatg 178
Query: 188 cccccgacatggttcgttgccaaatgaacttcaagcggctttccctgactgacatcaaga 247
| || |||||| | || ||||| ||||||||||||||||| |||||||| ||||||||||
Sbjct: 179 caccggacatgatccgctgccagatgaacttcaagcggctctccctgaccgacatcaaga 238
Query: 248 ttgacattaaacgtgtcccaaagaagactacactgatcaaggcaatggaggaagctgatg 307
||||||| || || |||| |||||| | || |||||||| || ||||||||||||||||
Sbjct: 239 ttgacatcaagcggatccctaagaaggcaactctgatcaaagctatggaggaagctgatg 298
Query: 308 tgaaaagcaagtgggagaatagctcatggggcaagaagctgattgttcagaagaggagag 367
|||| | |||||||||||| || ||||||||||||||||||||||| ||||||||||| |
Sbjct: 299 tgaagaccaagtgggagaacagttcatggggcaagaagctgattgtccagaagaggaggg 358
Query: 368 catcactcaatgactttgacaggttcaaggtcatgttggcgaagatcaagaggggtggtg 427
|||| |||||||||||||||||||||||||||||| | || |||||||||||||| || |
Sbjct: 359 catcgctcaatgactttgacaggttcaaggtcatgcttgccaagatcaagaggggaggag 418
Query: 428 ccatcaggcaagagcttgctaagcttaaaaaggtggctgctgctgcttagattgctttgg 487
| |||||||| ||||| || |||||||| |||| || ||| |||||||| || ||||||
Sbjct: 419 ctatcaggcaggagctagcgaagcttaagaaggaggttgccgctgcttanatcactttgg 478
Query: 488 tgg 490
|||
Sbjct: 479 tgg 481
>gb|BQ768753.1|BQ768753 EBro08_SQ012_H13_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ012_H13 5', mRNA sequence
Length = 614
Score = 442 bits (223), Expect = e-123
Identities = 373/423 (88%)
Strand = Plus / Plus
Query: 68 aaatgccgttcaagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaagg 127
||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||
Sbjct: 59 aaatgccgttcaagaggtttgtggagatcgggcgggtggccctggtgaactacggcaagg 118
Query: 128 agtatggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatg 187
| || |||||||||||||||||||||||||| ||||||||||||||||| || | ||||
Sbjct: 119 actacggccgcctcgtcgtcatcgtcgacgttgtcgaccagaacagggcatttattgatg 178
Query: 188 cccccgacatggttcgttgccaaatgaacttcaagcggctttccctgactgacatcaaga 247
| || |||||| | || ||||| ||||||||||||||||| |||||||| ||||||||||
Sbjct: 179 caccggacatgatccgctgccagatgaacttcaagcggctctccctgaccgacatcaaga 238
Query: 248 ttgacattaaacgtgtcccaaagaagactacactgatcaaggcaatggaggaagctgatg 307
||||||| || || |||| |||||| | || |||||||| || ||||||||||||||||
Sbjct: 239 ttgacatcaagcggatccctaagaaggcaactctgatcaaagctatggaggaagctgatg 298
Query: 308 tgaaaagcaagtgggagaatagctcatggggcaagaagctgattgttcagaagaggagag 367
|||| | |||||||||||| || ||||||||||||||||||||||| ||||||||||| |
Sbjct: 299 tgaagaccaagtgggagaacagttcatggggcaagaagctgattgtccagaagaggaggg 358
Query: 368 catcactcaatgactttgacaggttcaaggtcatgttggcgaagatcaagaggggtggtg 427
|||| |||||||||||||||||||||||||||||| | || |||||||||||||| || |
Sbjct: 359 catcgctcaatgactttgacaggttcaaggtcatgcttgccaagatcaagaggggaggag 418
Query: 428 ccatcaggcaagagcttgctaagcttaaaaaggtggctgctgctgcttagattgctttgg 487
| |||||||| ||||| || |||||||| |||| || ||| ||||||||||| ||||||
Sbjct: 419 ctatcaggcaggagctagcgaagcttaagaaggaggttgccgctgcttagatcactttgg 478
Query: 488 tgg 490
|||
Sbjct: 479 tgg 481
>gb|AW982424.3|AW982424 HVSMEg0003D18f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0003D18f, mRNA sequence
Length = 559
Score = 440 bits (222), Expect = e-122
Identities = 357/402 (88%)
Strand = Plus / Plus
Query: 70 atgccgttcaagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaaggag 129
|||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||
Sbjct: 40 atgccgttcaagaggttcgtcgagatcgggcgggtggccctggtgaactacggcaaggac 99
Query: 130 tatggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatgcc 189
|| ||||||||||||||||||||||||||||||||||||||| |||| || || || ||
Sbjct: 100 tacggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaaccgggcactcgtcgacgct 159
Query: 190 cccgacatggttcgttgccaaatgaacttcaagcggctttccctgactgacatcaagatt 249
|| || ||| | | ||||| |||||||||||||| ||||| ||||||||||||||||||
Sbjct: 160 cctgatatgatcaggtgccagatgaacttcaagcgtctttcactgactgacatcaagatt 219
Query: 250 gacattaaacgtgtcccaaagaagactacactgatcaaggcaatggaggaagctgatgtg 309
||||| || ||| |||| || ||| | || |||||||||| ||||||||||||||||||
Sbjct: 220 gacatcaagcgtatccccaaaaaggcaactttgatcaaggccatggaggaagctgatgtg 279
Query: 310 aaaagcaagtgggagaatagctcatggggcaagaagctgattgttcagaagaggagagca 369
|||| ||| |||||||| ||||| |||||||||||||| |||||||||||||| ||||||
Sbjct: 280 aaaaccaaatgggagaacagctcctggggcaagaagcttattgttcagaagagaagagca 339
Query: 370 tcactcaatgactttgacaggttcaaggtcatgttggcgaagatcaagaggggtggtgcc 429
|| || |||||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 340 tcgctgaatgactttgacaggttcaaggtcatgttggctaagattaagaggggtggtgct 399
Query: 430 atcaggcaagagcttgctaagcttaaaaaggtggctgctgct 471
||||||||||||||||| ||||| ||||||| || |||||||
Sbjct: 400 atcaggcaagagcttgccaagctcaaaaaggaggttgctgct 441
>gb|BM368114.2|BM368114 EBed01_SQ002_D13_R endosperm, 6 DPA, no treatment, cv Optic, EBed01
Hordeum vulgare subsp. vulgare cDNA clone
EBed01_SQ002_D13 5', mRNA sequence
Length = 581
Score = 438 bits (221), Expect = e-121
Identities = 372/423 (87%)
Strand = Plus / Plus
Query: 68 aaatgccgttcaagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaagg 127
||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||
Sbjct: 67 aaatgccgttcaagaggtttgtggagatcgggcgggtggccctggtgaactacggcaagg 126
Query: 128 agtatggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatg 187
| || |||||||||||||||||||||||||| ||||||||||||||||| ||| | ||||
Sbjct: 127 actacggccgcctcgtcgtcatcgtcgacgttgtcgaccagaacagggcacttattgatg 186
Query: 188 cccccgacatggttcgttgccaaatgaacttcaagcggctttccctgactgacatcaaga 247
| || |||||| | || ||||| ||||||||||||||||| |||||||| ||||||||||
Sbjct: 187 caccggacatgatccgctgccagatgaacttcaagcggctctccctgaccgacatcaaga 246
Query: 248 ttgacattaaacgtgtcccaaagaagactacactgatcaaggcaatggaggaagctgatg 307
||||||| || || |||| |||||| | || |||||||| || ||||||||||||||||
Sbjct: 247 ttgacatcaagcggatccctaagaaggcaactctgatcaaagctatggaggaagctgatg 306
Query: 308 tgaaaagcaagtgggagaatagctcatggggcaagaagctgattgttcagaagaggagag 367
|||| | |||||||||||| || ||||||||||||||||||||||| ||||||||||| |
Sbjct: 307 tgaagaccaagtgggagaacagttcatggggcaagaagctgattgtccagaagaggaggg 366
Query: 368 catcactcaatgactttgacaggttcaaggtcatgttggcgaagatcaagaggggtggtg 427
|||| |||||||||||||||||||||||||||||| | || |||||||||||||| || |
Sbjct: 367 catcgctcaatgactttgacaggttcaaggtcatgcttgccaagatcaagaggggaggag 426
Query: 428 ccatcaggcaagagcttgctaagcttaaaaaggtggctgctgctgcttagattgctttgg 487
| |||| ||| ||||| || |||||||| |||| || ||| |||||||| || ||||||
Sbjct: 427 ctatcangcaggagctagcgaagcttaagaaggaggttgccgctgcttanatcactttgg 486
Query: 488 tgg 490
|||
Sbjct: 487 tgg 489
>gb|BQ470561.1|BQ470561 HX03F15r HX Hordeum vulgare subsp. vulgare cDNA clone HX03F15
5-PRIME, mRNA sequence
Length = 592
Score = 436 bits (220), Expect = e-121
Identities = 372/423 (87%)
Strand = Plus / Plus
Query: 68 aaatgccgttcaagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaagg 127
||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||
Sbjct: 75 aaatgccgttcaagaggtttgtggagatcgggcgggtggccctggtgaactacggcaagg 134
Query: 128 agtatggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatg 187
| || |||||||||||||||||||||||||| ||||||||||||||||| ||| | ||||
Sbjct: 135 actacggccgcctcgtcgtcatcgtcgacgttgtcgaccagaacagggcacttattgatg 194
Query: 188 cccccgacatggttcgttgccaaatgaacttcaagcggctttccctgactgacatcaaga 247
| || |||||| | || ||||| ||||||||||||||||| |||||||| ||||||||||
Sbjct: 195 caccggacatgatccgctgccagatgaacttcaagcggctctccctgaccgacatcaaga 254
Query: 248 ttgacattaaacgtgtcccaaagaagactacactgatcaaggcaatggaggaagctgatg 307
||||||| || || |||| |||||| | || |||||||| || ||||||||||||||||
Sbjct: 255 ttgacatcaagcggatccctaagaaggcaactctgatcaaagctatggaggaagctgatg 314
Query: 308 tgaaaagcaagtgggagaatagctcatggggcaagaagctgattgttcagaagaggagag 367
|||| | |||||||||||| || ||||||||||||||||||||||| ||||||||||| |
Sbjct: 315 tgaagaccaagtgggagaacagttcatggggcaagaagctgattgtccagaagaggaggg 374
Query: 368 catcactcaatgactttgacaggttcaaggtcatgttggcgaagatcaagaggggtggtg 427
|||| |||||||||||||||||||||||||||||| | || | ||||||||||| || |
Sbjct: 375 catcgctcaatgactttgacaggttcaaggtcatgcttgccagnatcaagaggggaggag 434
Query: 428 ccatcaggcaagagcttgctaagcttaaaaaggtggctgctgctgcttagattgctttgg 487
| |||||||| ||||| || |||||||| |||| || ||| ||||||||||| ||||||
Sbjct: 435 ctatcaggcaggagctagcgaagcttaagaaggaggttgccgctgcttagatcactttgg 494
Query: 488 tgg 490
|||
Sbjct: 495 tgg 497
>gb|BU982731.1|BU982731 HA27H03r HA Hordeum vulgare subsp. vulgare cDNA clone HA27H03
5-PRIME, mRNA sequence
Length = 647
Score = 436 bits (220), Expect = e-121
Identities = 374/424 (88%), Gaps = 1/424 (0%)
Strand = Plus / Plus
Query: 68 aaatgccgttcaagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaagg 127
||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||
Sbjct: 75 aaatgccgttcaagaggtttgtggagatcgggcgggtggccctggtgaactacggcaagg 134
Query: 128 agtatggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatg 187
| || |||||||||||||||||||||||||| ||||||||||||||||| ||| | ||||
Sbjct: 135 actacggccgcctcgtcgtcatcgtcgacgttgtcgaccagaacagggcacttattgatg 194
Query: 188 cccccgacatggttcgttgccaaatgaacttcaagcggctttccctgactgacatcaaga 247
| || |||||| | || ||||| ||||||||||||||||| |||||||| ||||||||||
Sbjct: 195 caccggacatgatccgctgccagatgaacttcaagcggctctccctgaccgacatcaaga 254
Query: 248 ttgacattaaacgtgtcccaaagaagactacactgatcaaggcaatggaggaagctgatg 307
||||||| || || |||| |||||| | || |||||||| || ||||||||||||||||
Sbjct: 255 ttgacatcaagcggatccctaagaaggcaactctgatcaaagctatggaggaagctgatg 314
Query: 308 tgaaaagcaagtgggagaatagctcatggggcaagaagctgattgttcagaagaggagag 367
|||| | |||||||||||| || ||||||||||||||||||||||| ||||||||||| |
Sbjct: 315 tgaagaccaagtgggagaacagttcatggggcaagaagctgattgtccagaagaggaggg 374
Query: 368 catcactcaatgactttgacaggttcaaggtcatgttggcgaag-atcaagaggggtggt 426
|||| |||||||||||||||||||||||||||||| | || ||| ||||||||||| ||
Sbjct: 375 catcgctcaatgactttgacaggttcaaggtcatgcttgccaagnatcaagaggggagga 434
Query: 427 gccatcaggcaagagcttgctaagcttaaaaaggtggctgctgctgcttagattgctttg 486
|| |||||||| ||||| || |||||||| |||| || ||| ||||||||||| |||||
Sbjct: 435 gctatcaggcaggagctagcgaagcttaagaaggaggttgccgctgcttagatcactttg 494
Query: 487 gtgg 490
||||
Sbjct: 495 gtgg 498
>gb|CA029887.1|CA029887 HX05H22r HX Hordeum vulgare subsp. vulgare cDNA clone HX05H22
5-PRIME, mRNA sequence
Length = 641
Score = 436 bits (220), Expect = e-121
Identities = 374/424 (88%), Gaps = 1/424 (0%)
Strand = Plus / Plus
Query: 68 aaatgccgttcaagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaagg 127
||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||
Sbjct: 90 aaatgccgttcaagaggtttgtggagatcgggcgggtggccctggtgaactacggcaagg 149
Query: 128 agtatggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatg 187
| || |||||||||||||||||||||||||| ||||||||||||||||| ||| | ||||
Sbjct: 150 actacggccgcctcgtcgtcatcgtcgacgttgtcgaccagaacagggcacttattgatg 209
Query: 188 cccccgacatggttcgttgccaaatgaacttcaagcggctttccctgactgacatcaaga 247
| || |||||| | || ||||| ||||||||||||||||| |||||||| ||||||||||
Sbjct: 210 caccggacatgatccgctgccagatgaacttcaagcggctctccctgaccgacatcaaga 269
Query: 248 ttgacattaaacgtgtcccaaagaagactacactgatcaaggcaatggaggaagctgatg 307
||||||| || || |||| |||||| | || |||||||| || ||||||||||||||||
Sbjct: 270 ttgacatcaagcggatccctaagaaggcaactctgatcaaagctatggaggaagctgatg 329
Query: 308 tgaaaagcaagtgggagaatagctcatggggcaagaagctgattgttcagaagaggagag 367
|||| | |||||||||||| || ||||||||||||||||||||||| ||||||||||| |
Sbjct: 330 tgaagaccaagtgggagaacagttcatggggcaagaagctgattgtccagaagaggaggg 389
Query: 368 catcactcaatgactttgacaggttcaaggtcatgttggcgaag-atcaagaggggtggt 426
|||| |||||||||||||||||||||||||||||| | || ||| ||||||||||| ||
Sbjct: 390 catcgctcaatgactttgacaggttcaaggtcatgcttgccaagnatcaagaggggagga 449
Query: 427 gccatcaggcaagagcttgctaagcttaaaaaggtggctgctgctgcttagattgctttg 486
|| |||||||| ||||| || |||||||| |||| || ||| ||||||||||| |||||
Sbjct: 450 gctatcaggcaggagctagcgaagcttaagaaggaggttgccgctgcttagatcactttg 509
Query: 487 gtgg 490
||||
Sbjct: 510 gtgg 513
>gb|BM377528.2|BM377528 EBem04_SQ003_G14_R embryo, 12 DPA, no treatment, cv Optic, EBem04
Hordeum vulgare subsp. vulgare cDNA clone
EBem04_SQ003_G14 5', mRNA sequence
Length = 621
Score = 434 bits (219), Expect = e-120
Identities = 372/423 (87%)
Strand = Plus / Plus
Query: 68 aaatgccgttcaagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaagg 127
||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||
Sbjct: 88 aaatgccgttcaagaggtttgtggagatcgggcgggtggccctggtgaactacggcaagg 147
Query: 128 agtatggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatg 187
| || ||||||||||||||||||||||||| ||||||||||||||||| ||| | ||||
Sbjct: 148 actaccgccgcctcgtcgtcatcgtcgacgttgtcgaccagaacagggcacttattgatg 207
Query: 188 cccccgacatggttcgttgccaaatgaacttcaagcggctttccctgactgacatcaaga 247
| || |||||| | || ||||| ||||||||||||||||| |||||||| ||||||||||
Sbjct: 208 caccggacatgatccgctgccagatgaacttcaagcggctctccctgaccgacatcaaga 267
Query: 248 ttgacattaaacgtgtcccaaagaagactacactgatcaaggcaatggaggaagctgatg 307
||||||| || || |||| |||||| | || |||||||| || ||||||||||||||||
Sbjct: 268 ttgacatcaagcggatccctaagaaggcaactctgatcaaagctatggaggaagctgatg 327
Query: 308 tgaaaagcaagtgggagaatagctcatggggcaagaagctgattgttcagaagaggagag 367
|||| | |||||||||||| || ||||||||||||||||||||||| ||||||||||| |
Sbjct: 328 tgaagaccaagtgggagaacagttcatggggcaagaagctgattgtccagaagaggaggg 387
Query: 368 catcactcaatgactttgacaggttcaaggtcatgttggcgaagatcaagaggggtggtg 427
|||| |||||||||||||||||||||||||||||| | || |||||||||||||| || |
Sbjct: 388 catcgctcaatgactttgacaggttcaaggtcatgcttgccaagatcaagaggggaggag 447
Query: 428 ccatcaggcaagagcttgctaagcttaaaaaggtggctgctgctgcttagattgctttgg 487
| |||||||| ||||| || |||||||| || | || ||| ||||||||||| ||||||
Sbjct: 448 ctatcaggcaggagctagcgaagcttaagaaagaggttgccgctgcttagatcactttgg 507
Query: 488 tgg 490
|||
Sbjct: 508 tgg 510
>gb|BQ767264.1|BQ767264 EBro08_SQ008_M10_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ008_M10 5', mRNA sequence
Length = 588
Score = 434 bits (219), Expect = e-120
Identities = 372/423 (87%)
Strand = Plus / Plus
Query: 68 aaatgccgttcaagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaagg 127
||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||
Sbjct: 67 aaatgccgttcaagaggtttgtggagatcgggcgggtggccctggtgaactacggcaagg 126
Query: 128 agtatggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatg 187
| || |||||||||||||||||||||||||| ||||||||||||||||| ||| | ||||
Sbjct: 127 actacggccgcctcgtcgtcatcgtcgacgttgtcgaccagaacagggcacttattgatg 186
Query: 188 cccccgacatggttcgttgccaaatgaacttcaagcggctttccctgactgacatcaaga 247
| || |||||| | || ||||| ||||||||||||||||| |||||||| ||||||||||
Sbjct: 187 caccggacatgatccgctgccagatgaacttcaagcggctctccctgaccgacatcaaga 246
Query: 248 ttgacattaaacgtgtcccaaagaagactacactgatcaaggcaatggaggaagctgatg 307
||||||| || || |||| |||||| | || |||||||| || ||||||||||||||||
Sbjct: 247 ttgacatcaagcggatccctaagaaggcaactctgatcaaagctatggaggaagctgatg 306
Query: 308 tgaaaagcaagtgggagaatagctcatggggcaagaagctgattgttcagaagaggagag 367
|||| | |||||||||||| || ||||||||||||||||||||||| ||||||||||| |
Sbjct: 307 tgaagaccaagtgggagaacagttcatggggcaagaagctgattgtccagaagaggaggg 366
Query: 368 catcactcaatgactttgacaggttcaaggtcatgttggcgaagatcaagaggggtggtg 427
|||| |||||||||||||||||||||||||||||| | || |||||||||||||| || |
Sbjct: 367 catcgctcaatgactttgacaggttcaaggtcatgcttgccaagatcaagaggggaggag 426
Query: 428 ccatcaggcaagagcttgctaagcttaaaaaggtggctgctgctgcttagattgctttgg 487
| |||||||| ||||| || |||||||| || | || ||| |||||||| || ||||||
Sbjct: 427 ctatcaggcaggagctagcgaagcttaagaaagaggttgccgctgcttaaatcactttgg 486
Query: 488 tgg 490
|||
Sbjct: 487 tgg 489
>gb|BE193624.2|BE193624 HVSMEh0082A09f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0082A09f, mRNA sequence
Length = 759
Score = 432 bits (218), Expect = e-120
Identities = 356/402 (88%)
Strand = Plus / Plus
Query: 70 atgccgttcaagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaaggag 129
|||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||
Sbjct: 38 atgccgttcaagaggttcgtcgagatcgggcgggtggccctggtgaactacggcaaggac 97
Query: 130 tatggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatgcc 189
|| ||||||||||||||||||||||||||||||||||||||| |||| || || || ||
Sbjct: 98 tacggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaaccgggcactcgtcgacgct 157
Query: 190 cccgacatggttcgttgccaaatgaacttcaagcggctttccctgactgacatcaagatt 249
|| || ||| | | ||||| |||||||||||||| ||||| ||||||||||||||||||
Sbjct: 158 cctgatatgatcaggtgccagatgaacttcaagcgtctttcactgactgacatcaagatt 217
Query: 250 gacattaaacgtgtcccaaagaagactacactgatcaaggcaatggaggaagctgatgtg 309
||||| || ||| |||| || ||| | || |||||||||| ||||||||||||||||||
Sbjct: 218 gacatcaagcgtatccccaaaaaggcaactttgatcaaggccatggaggaagctgatgtg 277
Query: 310 aaaagcaagtgggagaatagctcatggggcaagaagctgattgttcagaagaggagagca 369
|||| ||| |||||||| ||||| |||||||||||||| |||||||||||||| ||||||
Sbjct: 278 aaaaccaaatgggagaacagctcctggggcaagaagcttattgttcagaagagaagagca 337
Query: 370 tcactcaatgactttgacaggttcaaggtcatgttggcgaagatcaagaggggtggtgcc 429
|| || |||||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 338 tcgctgaatgactttgacaggttcaaggtcatgttggctaagattaagaggggtggtgct 397
Query: 430 atcaggcaagagcttgctaagcttaaaaaggtggctgctgct 471
||||||||||||||||| ||||| || |||| || |||||||
Sbjct: 398 atcaggcaagagcttgccaagctcaagaaggaggttgctgct 439
>gb|BE196257.2|BE196257 HVSMEh0091M19f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0091M19f, mRNA sequence
Length = 899
Score = 432 bits (218), Expect = e-120
Identities = 356/402 (88%)
Strand = Plus / Plus
Query: 70 atgccgttcaagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaaggag 129
|||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||
Sbjct: 38 atgccgttcaagaggttcgtcgagatcgggcgggtggccctggtgaactacggcaaggac 97
Query: 130 tatggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatgcc 189
|| ||||||||||||||||||||||||||||||||||||||| |||| || || || ||
Sbjct: 98 tacggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaaccgggcactcgtcgacgct 157
Query: 190 cccgacatggttcgttgccaaatgaacttcaagcggctttccctgactgacatcaagatt 249
|| || ||| | | ||||| |||||||||||||| ||||| ||||||||||||||||||
Sbjct: 158 cctgatatgatcaggtgccagatgaacttcaagcgtctttcactgactgacatcaagatt 217
Query: 250 gacattaaacgtgtcccaaagaagactacactgatcaaggcaatggaggaagctgatgtg 309
||||| || ||| |||| || ||| | || |||||||||| ||||||||||||||||||
Sbjct: 218 gacatcaagcgtatccccaaaaaggcaactttgatcaaggccatggaggaagctgatgtg 277
Query: 310 aaaagcaagtgggagaatagctcatggggcaagaagctgattgttcagaagaggagagca 369
|||| ||| |||||||| ||||| |||||||||||||| |||||||||||||| ||||||
Sbjct: 278 aaaaccaaatgggagaacagctcctggggcaagaagcttattgttcagaagagaagagca 337
Query: 370 tcactcaatgactttgacaggttcaaggtcatgttggcgaagatcaagaggggtggtgcc 429
|| || |||||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 338 tcgctgaatgactttgacaggttcaaggtcatgttggctaagattaagaggggtggtgct 397
Query: 430 atcaggcaagagcttgctaagcttaaaaaggtggctgctgct 471
||||||||||||||||| ||||| || |||| || |||||||
Sbjct: 398 atcaggcaagagcttgccaagctcaagaaggaggttgctgct 439
>gb|BE195642.3|BE195642 HVSMEh0090A15f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0090A15f, mRNA sequence
Length = 917
Score = 432 bits (218), Expect = e-120
Identities = 356/402 (88%)
Strand = Plus / Plus
Query: 70 atgccgttcaagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaaggag 129
|||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||
Sbjct: 40 atgccgttcaagaggttcgtcgagatcgggcgggtggccctggtgaactacggcaaggac 99
Query: 130 tatggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatgcc 189
|| ||||||||||||||||||||||||||||||||||||||| |||| || || || ||
Sbjct: 100 tacggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaaccgggcactcgtcgacgct 159
Query: 190 cccgacatggttcgttgccaaatgaacttcaagcggctttccctgactgacatcaagatt 249
|| || ||| | | ||||| |||||||||||||| ||||| ||||||||||||||||||
Sbjct: 160 cctgatatgatcaggtgccagatgaacttcaagcgtctttcactgactgacatcaagatt 219
Query: 250 gacattaaacgtgtcccaaagaagactacactgatcaaggcaatggaggaagctgatgtg 309
||||| || ||| |||| || ||| | || |||||||||| ||||||||||||||||||
Sbjct: 220 gacatcaagcgtatccccaaaaaggcaactttgatcaaggccatggaggaagctgatgtg 279
Query: 310 aaaagcaagtgggagaatagctcatggggcaagaagctgattgttcagaagaggagagca 369
|||| ||| |||||||| ||||| |||||||||||||| |||||||||||||| ||||||
Sbjct: 280 aaaaccaaatgggagaacagctcctggggcaagaagcttattgttcagaagagaagagca 339
Query: 370 tcactcaatgactttgacaggttcaaggtcatgttggcgaagatcaagaggggtggtgcc 429
|| || |||||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 340 tcgctgaatgactttgacaggttcaaggtcatgttggctaagattaagaggggtggtgct 399
Query: 430 atcaggcaagagcttgctaagcttaaaaaggtggctgctgct 471
||||||||||||||||| ||||| || |||| || |||||||
Sbjct: 400 atcaggcaagagcttgccaagctcaagaaggaggttgctgct 441
>gb|AV913899.1|AV913899 AV913899 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags23k24 5', mRNA sequence
Length = 576
Score = 432 bits (218), Expect = e-120
Identities = 356/402 (88%)
Strand = Plus / Plus
Query: 70 atgccgttcaagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaaggag 129
|||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||
Sbjct: 51 atgccgttcaagaggttcgtcgagatcgggcgggtggccctggtgaactacggcaaggac 110
Query: 130 tatggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatgcc 189
|| ||||||||||||||||||||||||||||||||||||||| |||| || || || ||
Sbjct: 111 tacggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaaccgggcactcgtcgacgct 170
Query: 190 cccgacatggttcgttgccaaatgaacttcaagcggctttccctgactgacatcaagatt 249
|| || ||| | | ||||| |||||||||||||| ||||| ||||||||||||||||||
Sbjct: 171 cctgatatgatcaggtgccagatgaacttcaagcgtctttcactgactgacatcaagatt 230
Query: 250 gacattaaacgtgtcccaaagaagactacactgatcaaggcaatggaggaagctgatgtg 309
||||| || ||| |||| || ||| | || |||||||||| ||||||||||||||||||
Sbjct: 231 gacatcaagcgtatccccaaaaaggcaactttgatcaaggccatggaggaagctgatgtg 290
Query: 310 aaaagcaagtgggagaatagctcatggggcaagaagctgattgttcagaagaggagagca 369
|||| ||| |||||||| ||||| |||||||||||||| |||||||||||||| ||||||
Sbjct: 291 aaaaccaaatgggagaacagctcctggggcaagaagcttattgttcagaagagaagagca 350
Query: 370 tcactcaatgactttgacaggttcaaggtcatgttggcgaagatcaagaggggtggtgcc 429
|| || |||||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 351 tcgctgaatgactttgacaggttcaaggtcatgttggctaagattaagaggggtggtgct 410
Query: 430 atcaggcaagagcttgctaagcttaaaaaggtggctgctgct 471
||||||||||||||||| ||||| || |||| || |||||||
Sbjct: 411 atcaggcaagagcttgccaagctcaagaaggaggttgctgct 452
>gb|AJ460495.1|AJ460495 AJ460495 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200079E07F1, mRNA sequence
Length = 420
Score = 432 bits (218), Expect = e-120
Identities = 356/402 (88%)
Strand = Plus / Plus
Query: 70 atgccgttcaagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaaggag 129
|||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||
Sbjct: 15 atgccgttcaagaggttcgtcgagatcgggcgggtggccctggtgaactacggcaaggac 74
Query: 130 tatggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatgcc 189
|| ||||||||||||||||||||||||||||||||||||||| |||| || || || ||
Sbjct: 75 tacggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaaccgggcactcgtcgacgct 134
Query: 190 cccgacatggttcgttgccaaatgaacttcaagcggctttccctgactgacatcaagatt 249
|| || ||| | | ||||| |||||||||||||| ||||| ||||||||||||||||||
Sbjct: 135 cctgatatgatcaggtgccagatgaacttcaagcgtctttcactgactgacatcaagatt 194
Query: 250 gacattaaacgtgtcccaaagaagactacactgatcaaggcaatggaggaagctgatgtg 309
||||| || ||| |||| || ||| | || |||||||||| ||||||||||||||||||
Sbjct: 195 gacatcaagcgtatccccaaaaaggcaactttgatcaaggccatggaggaagctgatgtg 254
Query: 310 aaaagcaagtgggagaatagctcatggggcaagaagctgattgttcagaagaggagagca 369
|||| ||| |||||||| ||||| |||||||||||||| |||||||||||||| ||||||
Sbjct: 255 aaaaccaaatgggagaacagctcctggggcaagaagcttattgttcagaagagaagagca 314
Query: 370 tcactcaatgactttgacaggttcaaggtcatgttggcgaagatcaagaggggtggtgcc 429
|| || |||||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 315 tcgctgaatgactttgacaggttcaaggtcatgttggctaagattaagaggggtggtgct 374
Query: 430 atcaggcaagagcttgctaagcttaaaaaggtggctgctgct 471
||||||||||||||||| ||||| || |||| || |||||||
Sbjct: 375 atcaggcaagagcttgccaagctcaagaaggaggttgctgct 416
>gb|BJ465123.1|BJ465123 BJ465123 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags37p10 5', mRNA sequence
Length = 603
Score = 432 bits (218), Expect = e-120
Identities = 356/402 (88%)
Strand = Plus / Plus
Query: 70 atgccgttcaagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaaggag 129
|||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||
Sbjct: 33 atgccgttcaagaggttcgtcgagatcgggcgggtggccctggtgaactacggcaaggac 92
Query: 130 tatggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatgcc 189
|| ||||||||||||||||||||||||||||||||||||||| |||| || || || ||
Sbjct: 93 tacggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaaccgggcactcgtcgacgct 152
Query: 190 cccgacatggttcgttgccaaatgaacttcaagcggctttccctgactgacatcaagatt 249
|| || ||| | | ||||| |||||||||||||| ||||| ||||||||||||||||||
Sbjct: 153 cctgatatgatcaggtgccagatgaacttcaagcgtctttcactgactgacatcaagatt 212
Query: 250 gacattaaacgtgtcccaaagaagactacactgatcaaggcaatggaggaagctgatgtg 309
||||| || ||| |||| || ||| | || |||||||||| ||||||||||||||||||
Sbjct: 213 gacatcaagcgtatccccaaaaaggcaactttgatcaaggccatggaggaagctgatgtg 272
Query: 310 aaaagcaagtgggagaatagctcatggggcaagaagctgattgttcagaagaggagagca 369
|||| ||| |||||||| ||||| |||||||||||||| |||||||||||||| ||||||
Sbjct: 273 aaaaccaaatgggagaacagctcctggggcaagaagcttattgttcagaagagaagagca 332
Query: 370 tcactcaatgactttgacaggttcaaggtcatgttggcgaagatcaagaggggtggtgcc 429
|| || |||||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 333 tcgctgaatgactttgacaggttcaaggtcatgttggctaagattaagaggggtggtgct 392
Query: 430 atcaggcaagagcttgctaagcttaaaaaggtggctgctgct 471
||||||||||||||||| ||||| || |||| || |||||||
Sbjct: 393 atcaggcaagagcttgccaagctcaagaaggaggttgctgct 434
>gb|AJ460492.1|AJ460492 AJ460492 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200012D07F1, mRNA sequence
Length = 420
Score = 430 bits (217), Expect = e-119
Identities = 355/401 (88%)
Strand = Plus / Plus
Query: 70 atgccgttcaagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaaggag 129
|||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||
Sbjct: 20 atgccgttcaagaggttcgtcgagatcgggcgggtggccctggtgaactacggcaaggac 79
Query: 130 tatggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatgcc 189
|| ||||||||||||||||||||||||||||||||||||||| |||| || || || ||
Sbjct: 80 tacggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaaccgggcactcgtcgacgct 139
Query: 190 cccgacatggttcgttgccaaatgaacttcaagcggctttccctgactgacatcaagatt 249
|| || ||| | | ||||| |||||||||||||| ||||| ||||||||||||||||||
Sbjct: 140 cctgatatgatcaggtgccagatgaacttcaagcgtctttcactgactgacatcaagatt 199
Query: 250 gacattaaacgtgtcccaaagaagactacactgatcaaggcaatggaggaagctgatgtg 309
||||| || ||| |||| || ||| | || |||||||||| ||||||||||||||||||
Sbjct: 200 gacatcaagcgtatccccaaaaaggcaactttgatcaaggccatggaggaagctgatgtg 259
Query: 310 aaaagcaagtgggagaatagctcatggggcaagaagctgattgttcagaagaggagagca 369
|||| ||| |||||||| ||||| |||||||||||||| |||||||||||||| ||||||
Sbjct: 260 aaaaccaaatgggagaacagctcctggggcaagaagcttattgttcagaagagaagagca 319
Query: 370 tcactcaatgactttgacaggttcaaggtcatgttggcgaagatcaagaggggtggtgcc 429
|| || |||||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 320 tcgctgaatgactttgacaggttcaaggtcatgttggctaagattaagaggggtggtgct 379
Query: 430 atcaggcaagagcttgctaagcttaaaaaggtggctgctgc 470
||||||||||||||||| ||||| || |||| || ||||||
Sbjct: 380 atcaggcaagagcttgccaagctcaagaaggaggttgctgc 420
>gb|BM101137.2|BM101137 EBpi01_SQ002_P21_R pistil, 1 DPA, no treatment, cv Optic, EBpi01
Hordeum vulgare subsp. vulgare cDNA clone
EBpi01_SQ002_P21 5', mRNA sequence
Length = 614
Score = 430 bits (217), Expect = e-119
Identities = 349/393 (88%)
Strand = Plus / Plus
Query: 68 aaatgccgttcaagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaagg 127
||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||
Sbjct: 51 aaatgccgttcaagaggtttgtggagatcgggcgggtggccctggtgaactacggcaagg 110
Query: 128 agtatggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatg 187
| || |||||||||||||||||||||||||| ||||||||||||||||| ||| | ||||
Sbjct: 111 actacggccgcctcgtcgtcatcgtcgacgttgtcgaccagaacagggcacttattgatg 170
Query: 188 cccccgacatggttcgttgccaaatgaacttcaagcggctttccctgactgacatcaaga 247
| || |||||| | || ||||| ||||||||||||||||| |||||||| ||||||||||
Sbjct: 171 caccggacatgatccgctgccagatgaacttcaagcggctctccctgaccgacatcaaga 230
Query: 248 ttgacattaaacgtgtcccaaagaagactacactgatcaaggcaatggaggaagctgatg 307
||||||| || || |||| |||||| | || |||||||| || ||||||||||||||||
Sbjct: 231 ttgacatcaagcggatccctaagaaggcaactctgatcaaagctatggaggaagctgatg 290
Query: 308 tgaaaagcaagtgggagaatagctcatggggcaagaagctgattgttcagaagaggagag 367
|||| | |||||||||||| || ||||||||||||||||||||||| ||||||||||| |
Sbjct: 291 tgaagaccaagtgggagaacagttcatggggcaagaagctgattgtccagaagaggaggg 350
Query: 368 catcactcaatgactttgacaggttcaaggtcatgttggcgaagatcaagaggggtggtg 427
|||| |||||||||||||||||||||||||||||| | || |||||||||||||| || |
Sbjct: 351 catcgctcaatgactttgacaggttcaaggtcatgcttgccaagatcaagaggggaggag 410
Query: 428 ccatcaggcaagagcttgctaagcttaaaaagg 460
| |||||||| ||||| || |||||||| ||||
Sbjct: 411 ctatcaggcaggagctagcgaagcttaagaagg 443
>gb|AV915789.1|AV915789 AV915789 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags16a07 5', mRNA sequence
Length = 417
Score = 426 bits (215), Expect = e-118
Identities = 341/383 (89%)
Strand = Plus / Plus
Query: 70 atgccgttcaagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaaggag 129
|||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||
Sbjct: 29 atgccgttcaagaggttcgtcgagatcgggcgggtggccctggtgaactacggcaaggac 88
Query: 130 tatggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatgcc 189
|| ||||||||||||||||||||||||||||||||||||||| |||| || || || ||
Sbjct: 89 tacggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaaccgggcactcgtcgacgct 148
Query: 190 cccgacatggttcgttgccaaatgaacttcaagcggctttccctgactgacatcaagatt 249
|| || ||| | | ||||| |||||||||||||| ||||| ||||||||||||||||||
Sbjct: 149 cctgatatgatcaggtgccagatgaacttcaagcgtctttcactgactgacatcaagatt 208
Query: 250 gacattaaacgtgtcccaaagaagactacactgatcaaggcaatggaggaagctgatgtg 309
||||| || ||| |||| || ||| | || |||||||||| ||||||||||||||||||
Sbjct: 209 gacatcaagcgtatccccaaaaaggcaactttgatcaaggccatggaggaagctgatgtg 268
Query: 310 aaaagcaagtgggagaatagctcatggggcaagaagctgattgttcagaagaggagagca 369
|||| ||| |||||||| ||||| |||||||||||||| |||||||||||||| ||||||
Sbjct: 269 aaaaccaaatgggagaacagctcctggggcaagaagcttattgttcagaagagaagagca 328
Query: 370 tcactcaatgactttgacaggttcaaggtcatgttggcgaagatcaagaggggtggtgcc 429
|| || |||||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 329 tcgctgaatgactttgacaggttcaaggtcatgttggctaagattaagaggggtggtgct 388
Query: 430 atcaggcaagagcttgctaagct 452
||||||||||||||||| |||||
Sbjct: 389 atcaggcaagagcttgccaagct 411
>gb|BQ759429.1|BQ759429 EBpi01_SQ004_B15_R pistil, 1 DPA, no treatment, cv Optic, EBpi01
Hordeum vulgare subsp. vulgare cDNA clone
EBpi01_SQ004_B15 5', mRNA sequence
Length = 546
Score = 426 bits (215), Expect = e-118
Identities = 371/423 (87%)
Strand = Plus / Plus
Query: 68 aaatgccgttcaagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaagg 127
||||| ||||||||||||| |||||||||||||| |||||||| ||||||||||||||||
Sbjct: 30 aaatgtcgttcaagaggtttgtggagatcgggcgggtggccctggtgaactacggcaagg 89
Query: 128 agtatggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatg 187
| || |||||||||||||||||||||||||| ||||||||||||||||| ||| | ||||
Sbjct: 90 actacggccgcctcgtcgtcatcgtcgacgttgtcgaccagaacagggcacttattgatg 149
Query: 188 cccccgacatggttcgttgccaaatgaacttcaagcggctttccctgactgacatcaaga 247
| || |||||| | || ||||| ||||| ||||||||||| |||||||| ||||||||||
Sbjct: 150 caccggacatgatccgctgccagatgaatttcaagcggctctccctgaccgacatcaaga 209
Query: 248 ttgacattaaacgtgtcccaaagaagactacactgatcaaggcaatggaggaagctgatg 307
||||||| || || |||| |||||| | || |||||||| || ||||||||||||||||
Sbjct: 210 ttgacatcaagcggatccctaagaaggcaactctgatcaaagctatggaggaagctgatg 269
Query: 308 tgaaaagcaagtgggagaatagctcatggggcaagaagctgattgttcagaagaggagag 367
|||| | |||||||||||| || ||||||||||||||||||||||| ||||||||||| |
Sbjct: 270 tgaagaccaagtgggagaacagttcatggggcaagaagctgattgtccagaagaggaggg 329
Query: 368 catcactcaatgactttgacaggttcaaggtcatgttggcgaagatcaagaggggtggtg 427
|||| |||||||||||||||||||||||||||||| | || |||||||||||||| || |
Sbjct: 330 catcgctcaatgactttgacaggttcaaggtcatgcttgccaagatcaagaggggaggag 389
Query: 428 ccatcaggcaagagcttgctaagcttaaaaaggtggctgctgctgcttagattgctttgg 487
| |||||||| ||||| || |||||||| |||| || ||| |||||||| || ||||||
Sbjct: 390 ctatcaggcaggagctagcgaagcttaagaaggaggttgccgctgcttaaatcactttgg 449
Query: 488 tgg 490
|||
Sbjct: 450 tgg 452
>gb|CK125896.1|CK125896 BES1824111B1e11 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010E1111 5-PRIME, mRNA sequence
Length = 625
Score = 426 bits (215), Expect = e-118
Identities = 370/423 (87%)
Strand = Plus / Plus
Query: 68 aaatgccgttcaagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaagg 127
||||||||||||||||||| |||| |||||||| |||||||| ||||||||||||||||
Sbjct: 78 aaatgccgttcaagaggtttgtggnnatcgggcgggtggccctggtgaactacggcaagg 137
Query: 128 agtatggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatg 187
| || |||||||||||||||||||||||||| ||||||||||||||||| ||| | ||||
Sbjct: 138 actacggccgcctcgtcgtcatcgtcgacgttgtcgaccagaacagggcacttattgatg 197
Query: 188 cccccgacatggttcgttgccaaatgaacttcaagcggctttccctgactgacatcaaga 247
| || |||||| | || ||||| ||||||||||||||||| |||||||| ||||||||||
Sbjct: 198 caccggacatgatccgctgccagatgaacttcaagcggctctccctgaccgacatcaaga 257
Query: 248 ttgacattaaacgtgtcccaaagaagactacactgatcaaggcaatggaggaagctgatg 307
||||||| || || |||| |||||| | || |||||||| || ||||||||||||||||
Sbjct: 258 ttgacatcaagcggatccctaagaaggcaactctgatcaaagctatggaggaagctgatg 317
Query: 308 tgaaaagcaagtgggagaatagctcatggggcaagaagctgattgttcagaagaggagag 367
|||| | |||||||||||| || ||||||||||||||||||||||| |||||||||||
Sbjct: 318 tgaagaccaagtgggagaacagttcatggggcaagaagctgattgtccagaagaggaggn 377
Query: 368 catcactcaatgactttgacaggttcaaggtcatgttggcgaagatcaagaggggtggtg 427
|||| |||||||||||||||||||||||||||||| | || |||||||||||||| || |
Sbjct: 378 catcgctcaatgactttgacaggttcaaggtcatgcttgccaagatcaagaggggaggag 437
Query: 428 ccatcaggcaagagcttgctaagcttaaaaaggtggctgctgctgcttagattgctttgg 487
| |||||||| ||||| || |||||||| |||| || ||| |||||||| || ||||||
Sbjct: 438 ctatcaggcaggagctagcgaagcttaagaaggaggttgccgctgcttanatcactttgg 497
Query: 488 tgg 490
|||
Sbjct: 498 tgg 500
>gb|BM816732.1|BM816732 HB02C05_T3.ab1 HB Hordeum vulgare subsp. vulgare cDNA clone
HB02C05_T3.ab1 similar to (AC007109) 60S ribosomal
protein L14 [Arabidopsis thaliana], mRNA sequence
Length = 817
Score = 424 bits (214), Expect = e-117
Identities = 355/402 (88%)
Strand = Plus / Plus
Query: 70 atgccgttcaagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaaggag 129
|||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||
Sbjct: 42 atgccgttcaagaggttcgtcgagatcgggcgggtggccctggtgaactacggcaaggac 101
Query: 130 tatggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatgcc 189
|| ||||||||||||||||||||||||||||||||||||||| |||| || || || ||
Sbjct: 102 tacggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaaccgggcactcgtcgacgct 161
Query: 190 cccgacatggttcgttgccaaatgaacttcaagcggctttccctgactgacatcaagatt 249
|| || ||| | | ||||| |||||||||||||| ||||| ||||| ||||||||||||
Sbjct: 162 cctgatatgatcaggtgccagatgaacttcaagcgtctttcactgaccgacatcaagatt 221
Query: 250 gacattaaacgtgtcccaaagaagactacactgatcaaggcaatggaggaagctgatgtg 309
||||| || ||| |||| || ||| | || |||||||||| ||||||||||||||||||
Sbjct: 222 gacatcaagcgtatccccaaaaaggcaactttgatcaaggccatggaggaagctgatgtg 281
Query: 310 aaaagcaagtgggagaatagctcatggggcaagaagctgattgttcagaagaggagagca 369
|||| ||| |||||||| ||||| |||||||||||||| |||||||||||||| ||||||
Sbjct: 282 aaaaccaaatgggagaacagctcctggggcaagaagcttattgttcagaagagaagagca 341
Query: 370 tcactcaatgactttgacaggttcaaggtcatgttggcgaagatcaagaggggtggtgcc 429
|| || |||||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 342 tcgctgaatgactttgacaggttcaaggtcatgttggctaagattaagaggggtggtgct 401
Query: 430 atcaggcaagagcttgctaagcttaaaaaggtggctgctgct 471
||||||||||||||||| ||||| || |||| || |||||||
Sbjct: 402 atcaggcaagagcttgccaagctcaagaaggaggttgctgct 443
>gb|AJ460496.1|AJ460496 AJ460496 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200085H08F1, mRNA sequence
Length = 420
Score = 424 bits (214), Expect = e-117
Identities = 340/382 (89%)
Strand = Plus / Plus
Query: 70 atgccgttcaagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaaggag 129
|||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||
Sbjct: 39 atgccgttcaagaggttcgtcgagatcgggcgggtggccctggtgaactacggcaaggac 98
Query: 130 tatggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatgcc 189
|| ||||||||||||||||||||||||||||||||||||||| |||| || || || ||
Sbjct: 99 tacggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaaccgggcactcgtcgacgct 158
Query: 190 cccgacatggttcgttgccaaatgaacttcaagcggctttccctgactgacatcaagatt 249
|| || ||| | | ||||| |||||||||||||| ||||| ||||||||||||||||||
Sbjct: 159 cctgatatgatcaggtgccagatgaacttcaagcgtctttcactgactgacatcaagatt 218
Query: 250 gacattaaacgtgtcccaaagaagactacactgatcaaggcaatggaggaagctgatgtg 309
||||| || ||| |||| || ||| | || |||||||||| ||||||||||||||||||
Sbjct: 219 gacatcaagcgtatccccaaaaaggcaactttgatcaaggccatggaggaagctgatgtg 278
Query: 310 aaaagcaagtgggagaatagctcatggggcaagaagctgattgttcagaagaggagagca 369
|||| ||| |||||||| ||||| |||||||||||||| |||||||||||||| ||||||
Sbjct: 279 aaaaccaaatgggagaacagctcctggggcaagaagcttattgttcagaagagaagagca 338
Query: 370 tcactcaatgactttgacaggttcaaggtcatgttggcgaagatcaagaggggtggtgcc 429
|| || |||||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 339 tcgctgaatgactttgacaggttcaaggtcatgttggctaagattaagaggggtggtgct 398
Query: 430 atcaggcaagagcttgctaagc 451
||||||||||||||||| ||||
Sbjct: 399 atcaggcaagagcttgccaagc 420
>gb|BJ463077.1|BJ463077 BJ463077 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags25k09 5', mRNA sequence
Length = 519
Score = 424 bits (214), Expect = e-117
Identities = 355/402 (88%)
Strand = Plus / Plus
Query: 70 atgccgttcaagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaaggag 129
|||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||
Sbjct: 39 atgccgttcaagaggttcgtcgagatcgggcgggtggccctggtgaactacggcaaggac 98
Query: 130 tatggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatgcc 189
|| ||||||||||||||||||||||||||||||||||||||| |||| || || || ||
Sbjct: 99 tacggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaaccgggcactcgtcgacgct 158
Query: 190 cccgacatggttcgttgccaaatgaacttcaagcggctttccctgactgacatcaagatt 249
|| || ||| | | ||||| |||||||||||||| ||||| ||||||||||||||||||
Sbjct: 159 cctgatatgatcaggtgccagatgaacttcaagcgtctttcactgactgacatcaagatt 218
Query: 250 gacattaaacgtgtcccaaagaagactacactgatcaaggcaatggaggaagctgatgtg 309
||||| || ||| |||| || ||| | || |||||||||| ||||||||||||||||||
Sbjct: 219 gacatcaagcgtatccccaaaaaggcaactttgatcaaggccatggaggaagctgatgtg 278
Query: 310 aaaagcaagtgggagaatagctcatggggcaagaagctgattgttcagaagaggagagca 369
|||| ||| |||||||| ||||| |||||||||||||| |||||||||||||| ||||||
Sbjct: 279 aaaaccaaatgggagaacagctcctggggcaagaagcttattgttcagaagagaagagca 338
Query: 370 tcactcaatgactttgacaggttcaaggtcatgttggcgaagatcaagaggggtggtgcc 429
|| || ||||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 339 tcgctgaatgactttgacaggttcaaggtcatgttggttaagattaagaggggtggtgct 398
Query: 430 atcaggcaagagcttgctaagcttaaaaaggtggctgctgct 471
||||||||||||||||| ||||| || |||| || |||||||
Sbjct: 399 atcaggcaagagcttgccaagctcaagaaggaggttgctgct 440
>gb|BJ463126.1|BJ463126 BJ463126 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags25o09 5', mRNA sequence
Length = 567
Score = 424 bits (214), Expect = e-117
Identities = 355/402 (88%)
Strand = Plus / Plus
Query: 70 atgccgttcaagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaaggag 129
|||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||
Sbjct: 39 atgccgttcaagaggttcgtcgagatcgggcgggtggccctggtgaactacggcaaggac 98
Query: 130 tatggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatgcc 189
|| ||||||||||||||||||||||||||||||||||||||| |||| || || || ||
Sbjct: 99 tacggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaaccgggcactcgtcgacgct 158
Query: 190 cccgacatggttcgttgccaaatgaacttcaagcggctttccctgactgacatcaagatt 249
|| || ||| | | ||||| |||||||||||||| ||||| ||||||||||||||||||
Sbjct: 159 cctgatatgatcaggtgccagatgaacttcaagcgtctttcactgactgacatcaagatt 218
Query: 250 gacattaaacgtgtcccaaagaagactacactgatcaaggcaatggaggaagctgatgtg 309
||||| || ||| |||| || ||| | || |||||||||| ||||||||||||||||||
Sbjct: 219 gacatcaagcgtatccccaaaaaggcaactttgatcaaggccatggaggaagctgatgtg 278
Query: 310 aaaagcaagtgggagaatagctcatggggcaagaagctgattgttcagaagaggagagca 369
|||| ||| |||||||| ||||| |||||||||||||| |||||||||||||| ||||||
Sbjct: 279 aaaaccaaatgggagaacagctcctggggcaagaagcttattgttcagaagagaagagca 338
Query: 370 tcactcaatgactttgacaggttcaaggtcatgttggcgaagatcaagaggggtggtgcc 429
|| || ||||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 339 tcgctgaatgactttgacaggttcaaggtcatgttggttaagattaagaggggtggtgct 398
Query: 430 atcaggcaagagcttgctaagcttaaaaaggtggctgctgct 471
||||||||||||||||| ||||| || |||| || |||||||
Sbjct: 399 atcaggcaagagcttgccaagctcaagaaggaggttgctgct 440
>gb|BJ467579.1|BJ467579 BJ467579 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags25o09 3', mRNA sequence
Length = 523
Score = 424 bits (214), Expect = e-117
Identities = 355/402 (88%)
Strand = Plus / Minus
Query: 70 atgccgttcaagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaaggag 129
|||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||
Sbjct: 485 atgccgttcaagaggttcgtcgagatcgggcgggtggccctggtgaactacggcaaggac 426
Query: 130 tatggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatgcc 189
|| ||||||||||||||||||||||||||||||||||||||| |||| || || || ||
Sbjct: 425 tacggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaaccgggcactcgtcgacgct 366
Query: 190 cccgacatggttcgttgccaaatgaacttcaagcggctttccctgactgacatcaagatt 249
|| || ||| | | ||||| |||||||||||||| ||||| ||||||||||||||||||
Sbjct: 365 cctgatatgatcaggtgccagatgaacttcaagcgtctttcactgactgacatcaagatt 306
Query: 250 gacattaaacgtgtcccaaagaagactacactgatcaaggcaatggaggaagctgatgtg 309
||||| || ||| |||| || ||| | || |||||||||| ||||||||||||||||||
Sbjct: 305 gacatcaagcgtatccccaaaaaggcaactttgatcaaggccatggaggaagctgatgtg 246
Query: 310 aaaagcaagtgggagaatagctcatggggcaagaagctgattgttcagaagaggagagca 369
|||| ||| |||||||| ||||| |||||||||||||| |||||||||||||| ||||||
Sbjct: 245 aaaaccaaatgggagaacagctcctggggcaagaagcttattgttcagaagagaagagca 186
Query: 370 tcactcaatgactttgacaggttcaaggtcatgttggcgaagatcaagaggggtggtgcc 429
|| || ||||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 185 tcgctgaatgactttgacaggttcaaggtcatgttggttaagattaagaggggtggtgct 126
Query: 430 atcaggcaagagcttgctaagcttaaaaaggtggctgctgct 471
||||||||||||||||| ||||| || |||| || |||||||
Sbjct: 125 atcaggcaagagcttgccaagctcaagaaggaggttgctgct 84
>gb|BQ657240.1|BQ657240 HA09C02u HA Hordeum vulgare subsp. vulgare cDNA clone HA09C02
3-PRIME, mRNA sequence
Length = 460
Score = 424 bits (214), Expect = e-117
Identities = 343/386 (88%)
Strand = Plus / Plus
Query: 68 aaatgccgttcaagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaagg 127
||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||
Sbjct: 75 aaatgccgttcaagaggtttgtggagatcgggcgggtggccctggtgaactacggcaagg 134
Query: 128 agtatggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatg 187
| || |||||||||||||||||||||||||| ||||||||||||||||| ||| | ||||
Sbjct: 135 actacggccgcctcgtcgtcatcgtcgacgttgtcgaccagaacagggcacttattgatg 194
Query: 188 cccccgacatggttcgttgccaaatgaacttcaagcggctttccctgactgacatcaaga 247
| || |||||| | || ||||| ||||||||||||||||| |||||||| ||||||||||
Sbjct: 195 caccggacatgatccgctgccagatgaacttcaagcggctctccctgaccgacatcaaga 254
Query: 248 ttgacattaaacgtgtcccaaagaagactacactgatcaaggcaatggaggaagctgatg 307
||||||| || || |||| |||||| | || |||||||| || ||||||||||||||||
Sbjct: 255 ttgacatcaagcggatccctaagaaggcaactctgatcaaagctatggaggaagctgatg 314
Query: 308 tgaaaagcaagtgggagaatagctcatggggcaagaagctgattgttcagaagaggagag 367
|||| | |||||||||||| || ||||||||||||||||||||||| ||||||||||| |
Sbjct: 315 tgaagaccaagtgggagaacagttcatggggcaagaagctgattgtccagaagaggaggg 374
Query: 368 catcactcaatgactttgacaggttcaaggtcatgttggcgaagatcaagaggggtggtg 427
|||| |||||||||||||||||||||||||||||| | || |||||||||||||| || |
Sbjct: 375 catcgctcaatgactttgacaggttcaaggtcatgcttgccaagatcaagaggggaggag 434
Query: 428 ccatcaggcaagagcttgctaagctt 453
| |||||||| ||||| || ||||||
Sbjct: 435 ctatcaggcaggagctagcgaagctt 460
>gb|BM377475.2|BM377475 EBem04_SQ003_D24_R embryo, 12 DPA, no treatment, cv Optic, EBem04
Hordeum vulgare subsp. vulgare cDNA clone
EBem04_SQ003_D24 5', mRNA sequence
Length = 549
Score = 424 bits (214), Expect = e-117
Identities = 355/402 (88%)
Strand = Plus / Plus
Query: 70 atgccgttcaagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaaggag 129
|||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||
Sbjct: 53 atgccgttcaagaggttcgtcgagatcgggcgggtggccctggtgaactacggcaaggac 112
Query: 130 tatggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatgcc 189
|| ||||||||||||||||||||||||||||||||||||||| |||| || || || ||
Sbjct: 113 tacggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaaccgggcactcgtcgacgct 172
Query: 190 cccgacatggttcgttgccaaatgaacttcaagcggctttccctgactgacatcaagatt 249
|| || ||| | | ||||| |||||||||||||| ||||| ||||| ||||||||||||
Sbjct: 173 cctgatatgatcaggtgccagatgaacttcaagcgtctttcactgaccgacatcaagatt 232
Query: 250 gacattaaacgtgtcccaaagaagactacactgatcaaggcaatggaggaagctgatgtg 309
||||| || ||| |||| || ||| | || |||||||||| ||||||||||||||||||
Sbjct: 233 gacatcaagcgtatccccaaaaaggcaactttgatcaaggccatggaggaagctgatgtg 292
Query: 310 aaaagcaagtgggagaatagctcatggggcaagaagctgattgttcagaagaggagagca 369
|||| ||| |||||||| ||||| |||||||||||||| |||||||||||||| ||||||
Sbjct: 293 aaaaccaaatgggagaacagctcctggggcaagaagcttattgttcagaagagaagagca 352
Query: 370 tcactcaatgactttgacaggttcaaggtcatgttggcgaagatcaagaggggtggtgcc 429
|| || |||||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 353 tcgctgaatgactttgacaggttcaaggtcatgttggctaagattaagaggggtggtgct 412
Query: 430 atcaggcaagagcttgctaagcttaaaaaggtggctgctgct 471
||||||||||||||||| ||||| || |||| || |||||||
Sbjct: 413 atcaggcaagagcttgccaagctcaagaaggaggttgctgct 454
>gb|BM377699.2|BM377699 EBem04_SQ003_O16_R embryo, 12 DPA, no treatment, cv Optic, EBem04
Hordeum vulgare subsp. vulgare cDNA clone
EBem04_SQ003_O16 5', mRNA sequence
Length = 602
Score = 424 bits (214), Expect = e-117
Identities = 355/402 (88%)
Strand = Plus / Plus
Query: 70 atgccgttcaagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaaggag 129
|||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||
Sbjct: 43 atgccgttcaagaggttcgtcgagatcgggcgggtggccctggtgaactacggcaaggac 102
Query: 130 tatggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatgcc 189
|| ||||||||||||||||||||||||||||||||||||||| |||| || || || ||
Sbjct: 103 tacggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaaccgggcactcgtcgacgct 162
Query: 190 cccgacatggttcgttgccaaatgaacttcaagcggctttccctgactgacatcaagatt 249
|| || ||| | | ||||| |||||||||||||| ||||| ||||| ||||||||||||
Sbjct: 163 cctgatatgatcaggtgccagatgaacttcaagcgtctttcactgaccgacatcaagatt 222
Query: 250 gacattaaacgtgtcccaaagaagactacactgatcaaggcaatggaggaagctgatgtg 309
||||| || ||| |||| || ||| | || |||||||||| ||||||||||||||||||
Sbjct: 223 gacatcaagcgtatccccaaaaaggcaactttgatcaaggccatggaggaagctgatgtg 282
Query: 310 aaaagcaagtgggagaatagctcatggggcaagaagctgattgttcagaagaggagagca 369
|||| ||| |||||||| ||||| |||||||||||||| |||||||||||||| ||||||
Sbjct: 283 aaaaccaaatgggagaacagctcctggggcaagaagcttattgttcagaagagaagagca 342
Query: 370 tcactcaatgactttgacaggttcaaggtcatgttggcgaagatcaagaggggtggtgcc 429
|| || |||||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 343 tcgctgaatgactttgacaggttcaaggtcatgttggctaagattaagaggggtggtgct 402
Query: 430 atcaggcaagagcttgctaagcttaaaaaggtggctgctgct 471
||||||||||||||||| ||||| || |||| || |||||||
Sbjct: 403 atcaggcaagagcttgccaagctcaagaaggaggttgctgct 444
>gb|BI780787.2|BI780787 EBes01_SQ002_D08_R embryo sac, 4-6 DPA, no treatment, cv Optic,
EBes01 Hordeum vulgare subsp. vulgare cDNA clone
EBes01_SQ002_D08 5', mRNA sequence
Length = 618
Score = 424 bits (214), Expect = e-117
Identities = 355/402 (88%)
Strand = Plus / Plus
Query: 70 atgccgttcaagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaaggag 129
|||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||
Sbjct: 50 atgccgttcaagaggttcgtcgagatcgggcgggtggccctggtgaactacggcaaggac 109
Query: 130 tatggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatgcc 189
|| ||||||||||||||||||||||||||||||||||||||| |||| || || || ||
Sbjct: 110 tacggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaaccgggcactcgtcgacgct 169
Query: 190 cccgacatggttcgttgccaaatgaacttcaagcggctttccctgactgacatcaagatt 249
|| || ||| | | ||||| |||||||||||||| ||||| ||||| ||||||||||||
Sbjct: 170 cctgatatgatcaggtgccagatgaacttcaagcgtctttcactgaccgacatcaagatt 229
Query: 250 gacattaaacgtgtcccaaagaagactacactgatcaaggcaatggaggaagctgatgtg 309
||||| || ||| |||| || ||| | || |||||||||| ||||||||||||||||||
Sbjct: 230 gacatcaagcgtatccccaaaaaggcaactttgatcaaggccatggaggaagctgatgtg 289
Query: 310 aaaagcaagtgggagaatagctcatggggcaagaagctgattgttcagaagaggagagca 369
|||| ||| |||||||| ||||| |||||||||||||| |||||||||||||| ||||||
Sbjct: 290 aaaaccaaatgggagaacagctcctggggcaagaagcttattgttcagaagagaagagca 349
Query: 370 tcactcaatgactttgacaggttcaaggtcatgttggcgaagatcaagaggggtggtgcc 429
|| || |||||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 350 tcgctgaatgactttgacaggttcaaggtcatgttggctaagattaagaggggtggtgct 409
Query: 430 atcaggcaagagcttgctaagcttaaaaaggtggctgctgct 471
||||||||||||||||| ||||| || |||| || |||||||
Sbjct: 410 atcaggcaagagcttgccaagctcaagaaggaggttgctgct 451
>gb|BM101365.2|BM101365 EBpi01_SQ003_K07_R pistil, 1 DPA, no treatment, cv Optic, EBpi01
Hordeum vulgare subsp. vulgare cDNA clone
EBpi01_SQ003_K07 5', mRNA sequence
Length = 584
Score = 424 bits (214), Expect = e-117
Identities = 355/402 (88%)
Strand = Plus / Plus
Query: 70 atgccgttcaagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaaggag 129
|||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||
Sbjct: 49 atgccgttcaagaggttcgtcgagatcgggcgggtggccctggtgaactacggcaaggac 108
Query: 130 tatggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatgcc 189
|| ||||||||||||||||||||||||||||||||||||||| |||| || || || ||
Sbjct: 109 tacggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaaccgggcactcgtcgacgct 168
Query: 190 cccgacatggttcgttgccaaatgaacttcaagcggctttccctgactgacatcaagatt 249
|| || ||| | | ||||| |||||||||||||| ||||| ||||| ||||||||||||
Sbjct: 169 cctgatatgatcaggtgccagatgaacttcaagcgtctttcactgaccgacatcaagatt 228
Query: 250 gacattaaacgtgtcccaaagaagactacactgatcaaggcaatggaggaagctgatgtg 309
||||| || ||| |||| || ||| | || |||||||||| ||||||||||||||||||
Sbjct: 229 gacatcaagcgtatccccaaaaaggcaactttgatcaaggccatggaggaagctgatgtg 288
Query: 310 aaaagcaagtgggagaatagctcatggggcaagaagctgattgttcagaagaggagagca 369
|||| ||| |||||||| ||||| |||||||||||||| |||||||||||||| ||||||
Sbjct: 289 aaaaccaaatgggagaacagctcctggggcaagaagcttattgttcagaagagaagagca 348
Query: 370 tcactcaatgactttgacaggttcaaggtcatgttggcgaagatcaagaggggtggtgcc 429
|| || |||||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 349 tcgctgaatgactttgacaggttcaaggtcatgttggctaagattaagaggggtggtgct 408
Query: 430 atcaggcaagagcttgctaagcttaaaaaggtggctgctgct 471
||||||||||||||||| ||||| || |||| || |||||||
Sbjct: 409 atcaggcaagagcttgccaagctcaagaaggaggttgctgct 450
>gb|BM370305.2|BM370305 EBro08_SQ003_M14_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ003_M14 5', mRNA sequence
Length = 679
Score = 424 bits (214), Expect = e-117
Identities = 355/402 (88%)
Strand = Plus / Plus
Query: 70 atgccgttcaagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaaggag 129
|||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||
Sbjct: 55 atgccgttcaagaggttcgtcgagatcgggcgggtggccctggtgaactacggcaaggac 114
Query: 130 tatggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatgcc 189
|| ||||||||||||||||||||||||||||||||||||||| |||| || || || ||
Sbjct: 115 tacggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaaccgggcactcgtcgacgct 174
Query: 190 cccgacatggttcgttgccaaatgaacttcaagcggctttccctgactgacatcaagatt 249
|| || ||| | | ||||| |||||||||||||| ||||| ||||| ||||||||||||
Sbjct: 175 cctgatatgatcaggtgccagatgaacttcaagcgtctttcactgaccgacatcaagatt 234
Query: 250 gacattaaacgtgtcccaaagaagactacactgatcaaggcaatggaggaagctgatgtg 309
||||| || ||| |||| || ||| | || |||||||||| ||||||||||||||||||
Sbjct: 235 gacatcaagcgtatccccaaaaaggcaactttgatcaaggccatggaggaagctgatgtg 294
Query: 310 aaaagcaagtgggagaatagctcatggggcaagaagctgattgttcagaagaggagagca 369
|||| ||| |||||||| ||||| |||||||||||||| |||||||||||||| ||||||
Sbjct: 295 aaaaccaaatgggagaacagctcctggggcaagaagcttattgttcagaagagaagagca 354
Query: 370 tcactcaatgactttgacaggttcaaggtcatgttggcgaagatcaagaggggtggtgcc 429
|| || |||||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 355 tcgctgaatgactttgacaggttcaaggtcatgttggctaagattaagaggggtggtgct 414
Query: 430 atcaggcaagagcttgctaagcttaaaaaggtggctgctgct 471
||||||||||||||||| ||||| || |||| || |||||||
Sbjct: 415 atcaggcaagagcttgccaagctcaagaaggaggttgctgct 456
>gb|BQ758693.1|BQ758693 EBma07_SQ002_E13_R maternal, 21 DPA, no treatment, cv Optic, EBma07
Hordeum vulgare subsp. vulgare cDNA clone
EBma07_SQ002_E13 5', mRNA sequence
Length = 576
Score = 424 bits (214), Expect = e-117
Identities = 355/402 (88%)
Strand = Plus / Plus
Query: 70 atgccgttcaagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaaggag 129
|||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||
Sbjct: 48 atgccgttcaagaggttcgtcgagatcgggcgggtggccctggtgaactacggcaaggac 107
Query: 130 tatggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatgcc 189
|| ||||||||||||||||||||||||||||||||||||||| |||| || || || ||
Sbjct: 108 tacggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaaccgggcactcgtcgacgct 167
Query: 190 cccgacatggttcgttgccaaatgaacttcaagcggctttccctgactgacatcaagatt 249
|| || ||| | | ||||| |||||||||||||| ||||| ||||| ||||||||||||
Sbjct: 168 cctgatatgatcaggtgccagatgaacttcaagcgtctttcactgaccgacatcaagatt 227
Query: 250 gacattaaacgtgtcccaaagaagactacactgatcaaggcaatggaggaagctgatgtg 309
||||| || ||| |||| || ||| | || |||||||||| ||||||||||||||||||
Sbjct: 228 gacatcaagcgtatccccaaaaaggcaactttgatcaaggccatggaggaagctgatgtg 287
Query: 310 aaaagcaagtgggagaatagctcatggggcaagaagctgattgttcagaagaggagagca 369
|||| ||| |||||||| ||||| |||||||||||||| |||||||||||||| ||||||
Sbjct: 288 aaaaccaaatgggagaacagctcctggggcaagaagcttattgttcagaagagaagagca 347
Query: 370 tcactcaatgactttgacaggttcaaggtcatgttggcgaagatcaagaggggtggtgcc 429
|| || |||||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 348 tcgctgaatgactttgacaggttcaaggtcatgttggctaagattaagaggggtggtgct 407
Query: 430 atcaggcaagagcttgctaagcttaaaaaggtggctgctgct 471
||||||||||||||||| ||||| || |||| || |||||||
Sbjct: 408 atcaggcaagagcttgccaagctcaagaaggaggttgctgct 449
>gb|BQ762662.1|BQ762662 EBro02_SQ004_L15_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ004_L15 5', mRNA sequence
Length = 621
Score = 424 bits (214), Expect = e-117
Identities = 355/402 (88%)
Strand = Plus / Plus
Query: 70 atgccgttcaagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaaggag 129
|||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||
Sbjct: 52 atgccgttcaagaggttcgtcgagatcgggcgggtggccctggtgaactacggcaaggac 111
Query: 130 tatggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatgcc 189
|| ||||||||||||||||||||||||||||||||||||||| |||| || || || ||
Sbjct: 112 tacggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaaccgggcactcgtcgacgct 171
Query: 190 cccgacatggttcgttgccaaatgaacttcaagcggctttccctgactgacatcaagatt 249
|| || ||| | | ||||| |||||||||||||| ||||| ||||| ||||||||||||
Sbjct: 172 cctgatatgatcaggtgccagatgaacttcaagcgtctttcactgaccgacatcaagatt 231
Query: 250 gacattaaacgtgtcccaaagaagactacactgatcaaggcaatggaggaagctgatgtg 309
||||| || ||| |||| || ||| | || |||||||||| ||||||||||||||||||
Sbjct: 232 gacatcaagcgtatccccaaaaaggcaactttgatcaaggccatggaggaagctgatgtg 291
Query: 310 aaaagcaagtgggagaatagctcatggggcaagaagctgattgttcagaagaggagagca 369
|||| ||| |||||||| ||||| |||||||||||||| |||||||||||||| ||||||
Sbjct: 292 aaaaccaaatgggagaacagctcctggggcaagaagcttattgttcagaagagaagagca 351
Query: 370 tcactcaatgactttgacaggttcaaggtcatgttggcgaagatcaagaggggtggtgcc 429
|| || |||||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 352 tcgctgaatgactttgacaggttcaaggtcatgttggctaagattaagaggggtggtgct 411
Query: 430 atcaggcaagagcttgctaagcttaaaaaggtggctgctgct 471
||||||||||||||||| ||||| || |||| || |||||||
Sbjct: 412 atcaggcaagagcttgccaagctcaagaaggaggttgctgct 453
>gb|BQ764226.1|BQ764226 EBan01_SQ005_A12_R anther, yellow stage, no treatment, cv Optic,
EBan01 Hordeum vulgare subsp. vulgare cDNA clone
EBan01_SQ005_A12 5', mRNA sequence
Length = 620
Score = 424 bits (214), Expect = e-117
Identities = 355/402 (88%)
Strand = Plus / Plus
Query: 70 atgccgttcaagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaaggag 129
|||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||
Sbjct: 48 atgccgttcaagaggttcgtcgagatcgggcgggtggccctggtgaactacggcaaggac 107
Query: 130 tatggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatgcc 189
|| ||||||||||||||||||||||||||||||||||||||| |||| || || || ||
Sbjct: 108 tacggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaaccgggcactcgtcgacgct 167
Query: 190 cccgacatggttcgttgccaaatgaacttcaagcggctttccctgactgacatcaagatt 249
|| || ||| | | ||||| |||||||||||||| ||||| ||||| ||||||||||||
Sbjct: 168 cctgatatgatcaggtgccagatgaacttcaagcgtctttcactgaccgacatcaagatt 227
Query: 250 gacattaaacgtgtcccaaagaagactacactgatcaaggcaatggaggaagctgatgtg 309
||||| || ||| |||| || ||| | || |||||||||| ||||||||||||||||||
Sbjct: 228 gacatcaagcgtatccccaaaaaggcaactttgatcaaggccatggaggaagctgatgtg 287
Query: 310 aaaagcaagtgggagaatagctcatggggcaagaagctgattgttcagaagaggagagca 369
|||| ||| |||||||| ||||| |||||||||||||| |||||||||||||| ||||||
Sbjct: 288 aaaaccaaatgggagaacagctcctggggcaagaagcttattgttcagaagagaagagca 347
Query: 370 tcactcaatgactttgacaggttcaaggtcatgttggcgaagatcaagaggggtggtgcc 429
|| || |||||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 348 tcgctgaatgactttgacaggttcaaggtcatgttggctaagattaagaggggtggtgct 407
Query: 430 atcaggcaagagcttgctaagcttaaaaaggtggctgctgct 471
||||||||||||||||| ||||| || |||| || |||||||
Sbjct: 408 atcaggcaagagcttgccaagctcaagaaggaggttgctgct 449
>gb|BQ766935.1|BQ766935 EBro08_SQ007_D15_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ007_D15 5', mRNA sequence
Length = 728
Score = 424 bits (214), Expect = e-117
Identities = 355/402 (88%)
Strand = Plus / Plus
Query: 70 atgccgttcaagaggttcgtggagatcgggcgagtggcccttgtgaactacggcaaggag 129
|||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||
Sbjct: 59 atgccgttcaagaggttcgtcgagatcgggcgggtggccctggtgaactacggcaaggac 118
Query: 130 tatggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaacagggctcttgtggatgcc 189
|| ||||||||||||||||||||||||||||||||||||||| |||| || || || ||
Sbjct: 119 tacggccgcctcgtcgtcatcgtcgacgtcgtcgaccagaaccgggcactcgtcgacgct 178
Query: 190 cccgacatggttcgttgccaaatgaacttcaagcggctttccctgactgacatcaagatt 249
|| || ||| | | ||||| |||||||||||||| ||||| ||||| ||||||||||||
Sbjct: 179 cctgatatgatcaggtgccagatgaacttcaagcgtctttcactgaccgacatcaagatt 238
Query: 250 gacattaaacgtgtcccaaagaagactacactgatcaaggcaatggaggaagctgatgtg 309
||||| || ||| |||| || ||| | || |||||||||| ||||||||||||||||||
Sbjct: 239 gacatcaagcgtatccccaaaaaggcaactttgatcaaggccatggaggaagctgatgtg 298
Query: 310 aaaagcaagtgggagaatagctcatggggcaagaagctgattgttcagaagaggagagca 369
|||| ||| |||||||| ||||| |||||||||||||| |||||||||||||| ||||||
Sbjct: 299 aaaaccaaatgggagaacagctcctggggcaagaagcttattgttcagaagagaagagca 358
Query: 370 tcactcaatgactttgacaggttcaaggtcatgttggcgaagatcaagaggggtggtgcc 429
|| || |||||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 359 tcgctgaatgactttgacaggttcaaggtcatgttggctaagattaagaggggtggtgct 418
Query: 430 atcaggcaagagcttgctaagcttaaaaaggtggctgctgct 471
||||||||||||||||| ||||| || |||| || |||||||
Sbjct: 419 atcaggcaagagcttgccaagctcaagaaggaggttgctgct 460
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 114,501
Number of Sequences: 312970
Number of extensions: 114501
Number of successful extensions: 38489
Number of sequences better than 0.5: 186
Number of HSP's better than 0.5 without gapping: 186
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 38182
Number of HSP's gapped (non-prelim): 296
length of query: 690
length of database: 175,134,539
effective HSP length: 19
effective length of query: 671
effective length of database: 169,188,109
effective search space: 113525221139
effective search space used: 113525221139
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)