BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1738980.2.1
(917 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BM369733.2|BM369733 EBem07_SQ004_H07_R embryo, 28 DPA, n... 228 3e-058
gb|AV913623.1|AV913623 AV913623 K. Sato unpublished cDNA li... 117 7e-025
gb|BQ471126.1|BQ471126 HV01D06T HV Hordeum vulgare subsp. v... 117 7e-025
gb|BQ472178.1|BQ472178 HV04K06r HV Hordeum vulgare subsp. v... 117 7e-025
gb|BF259078.2|BF259078 HVSMEf0017J19f Hordeum vulgare seedl... 103 1e-020
gb|BG368894.1|BG368894 HVSMEi0021D06f Hordeum vulgare 20 DA... 103 1e-020
gb|BE214950.1|BE214950 HV_CEb0005F03f Hordeum vulgare seedl... 103 1e-020
gb|AV908971.1|AV908971 AV908971 K. Sato unpublished cDNA li... 103 1e-020
gb|BM375338.2|BM375338 EBem06_SQ003_A18_R embryo, 21 DPA, n... 103 1e-020
gb|BQ762933.1|BQ762933 EBro02_SQ006_H16 _R root, 3 week, hy... 103 1e-020
gb|CA011829.1|CA011829 HT03K17r HT Hordeum vulgare subsp. v... 103 1e-020
gb|CA012122.1|CA012122 HT04I07r HT Hordeum vulgare subsp. v... 103 1e-020
gb|CA013731.1|CA013731 HT09F05r HT Hordeum vulgare subsp. v... 103 1e-020
gb|CA022668.1|CA022668 HZ44A05r HZ Hordeum vulgare subsp. v... 103 1e-020
gb|BJ544235.1|BJ544235 BJ544235 K. Sato unpublished cDNA li... 103 1e-020
gb|BJ544573.1|BJ544573 BJ544573 K. Sato unpublished cDNA li... 103 1e-020
gb|AV918927.1|AV918927 AV918927 K. Sato unpublished cDNA li... 100 2e-019
gb|BE214207.2|BE214207 HV_CEb0002K18f Hordeum vulgare seedl... 96 2e-018
gb|CA012898.1|CA012898 HT06M15r HT Hordeum vulgare subsp. v... 96 2e-018
gb|CV058333.1|CV058333 BNEL36h8 Barley EST endosperm librar... 96 2e-018
gb|CV060337.1|CV060337 BNEL57a4 Barley EST endosperm librar... 96 2e-018
gb|BF259796.2|BF259796 HVSMEf0020E15f Hordeum vulgare seedl... 92 4e-017
gb|BG299389.1|BG299389 HVSMEa0019L19f Hordeum vulgare seedl... 88 6e-016
gb|BF627874.2|BF627874 HVSMEb0006C01f Hordeum vulgare seedl... 88 6e-016
gb|BQ469646.1|BQ469646 HZ01H04r HZ Hordeum vulgare subsp. v... 88 6e-016
gb|CA027668.1|CA027668 HZ59K12r HZ Hordeum vulgare subsp. v... 88 6e-016
gb|BQ467879.1|BQ467879 HR01D11r HR Hordeum vulgare subsp. v... 84 9e-015
gb|BQ767689.1|BQ767689 EBro08_SQ009_H13_R root, 3 week, dro... 84 9e-015
gb|BF066033.2|BF066033 HV_CEb0014K12f Hordeum vulgare seedl... 82 4e-014
gb|AL503233.1|AL503233 AL503233 Hordeum vulgare Barke roots... 80 1e-013
gb|AL504140.1|AL504140 AL504140 Hordeum vulgare Barke roots... 80 1e-013
gb|BF621473.2|BF621473 HVSMEa0011B16f Hordeum vulgare seedl... 80 1e-013
gb|BI949438.1|BI949438 HVSMEl0013O11f Hordeum vulgare spike... 80 1e-013
gb|BI960661.1|BI960661 HVSMEn0025K13f Hordeum vulgare rachi... 80 1e-013
gb|BQ471258.1|BQ471258 HV01N17T HV Hordeum vulgare subsp. v... 80 1e-013
gb|BE214393.3|BE214393 HV_CEb0003F04f Hordeum vulgare seedl... 76 2e-012
gb|BM817225.1|BM817225 HC109B04_T3.ab1 HC Hordeum vulgare s... 76 2e-012
gb|BI947723.1|BI947723 HVSMEl0006J20f Hordeum vulgare spike... 72 4e-011
gb|BF065184.1|BF065184 HV_CEb0023O18f Hordeum vulgare seedl... 72 4e-011
gb|BF261927.2|BF261927 HV_CEa0002J15f Hordeum vulgare seedl... 72 4e-011
gb|BF623987.2|BF623987 HVSMEa0008F14f Hordeum vulgare seedl... 70 1e-010
gb|BI954235.1|BI954235 HVSMEm0016M03f Hordeum vulgare green... 70 1e-010
gb|BF267688.2|BF267688 HV_CEa0018J20f Hordeum vulgare seedl... 70 1e-010
gb|CA025935.1|CA025935 HZ53J07r HZ Hordeum vulgare subsp. v... 70 1e-010
gb|BF624808.3|BF624808 HVSMEa0017M20f Hordeum vulgare seedl... 68 6e-010
gb|BF257083.2|BF257083 HVSMEf0011M23f Hordeum vulgare seedl... 68 6e-010
gb|BQ664112.1|BQ664112 HV01N17w HV Hordeum vulgare subsp. v... 68 6e-010
gb|AL450842.1|AL450842 AL450842 Hordeum vulgare Barke etiol... 66 2e-009
gb|BU998635.1|BU998635 HI11L03r HI Hordeum vulgare subsp. v... 66 2e-009
gb|BF622486.2|BF622486 HVSMEa0004I15f Hordeum vulgare seedl... 64 9e-009
gb|BF256380.2|BF256380 HVSMEf0009H03f Hordeum vulgare seedl... 64 9e-009
gb|BF623515.3|BF623515 HVSMEa0002H21f Hordeum vulgare seedl... 62 3e-008
gb|BF264380.2|BF264380 HV_CEa0009E08f Hordeum vulgare seedl... 62 3e-008
gb|BF258960.3|BF258960 HVSMEf0017C18f Hordeum vulgare seedl... 62 3e-008
gb|BU989585.1|BU989585 HF22C07r HF Hordeum vulgare subsp. v... 62 3e-008
gb|AL505815.1|AL505815 AL505815 Hordeum vulgare Barke roots... 60 1e-007
gb|BF622591.2|BF622591 HVSMEa0007C21f Hordeum vulgare seedl... 60 1e-007
gb|BF625970.2|BF625970 HVSMEa0015B01f Hordeum vulgare seedl... 60 1e-007
gb|BF626269.2|BF626269 HVSMEa0018D07f Hordeum vulgare seedl... 60 1e-007
gb|BG299590.1|BG299590 HVSMEa0020O20f Hordeum vulgare seedl... 60 1e-007
gb|BF626393.3|BF626393 HVSMEa0018A21f Hordeum vulgare seedl... 60 1e-007
gb|CA027071.1|CA027071 HZ57M23r HZ Hordeum vulgare subsp. v... 60 1e-007
gb|CV058068.1|CV058068 BNEL34a12 Barley EST endosperm libra... 60 1e-007
gb|BE411006.1|BE411006 ISC001.D03F990519 ITEC ISC Barley Le... 58 5e-007
gb|BE215757.1|BE215757 HV_CEb0008G14f Hordeum vulgare seedl... 58 5e-007
gb|BE216520.1|BE216520 HV_CEb0010L11f Hordeum vulgare seedl... 58 5e-007
gb|BF065899.1|BF065899 HV_CEb0014E21f Hordeum vulgare seedl... 58 5e-007
gb|BF065922.1|BF065922 HV_CEb0014F21f Hordeum vulgare seedl... 58 5e-007
gb|BF065944.1|BF065944 HV_CEb0014G19f Hordeum vulgare seedl... 58 5e-007
gb|BF065968.1|BF065968 HV_CEb0014H19f Hordeum vulgare seedl... 58 5e-007
gb|BF266117.2|BF266117 HV_CEa0014D16f Hordeum vulgare seedl... 58 5e-007
gb|BF267384.2|BF267384 HV_CEa0017M06f Hordeum vulgare seedl... 58 5e-007
gb|BE559055.2|BE559055 HV_CEb0022I16f Hordeum vulgare seedl... 58 5e-007
gb|AV922724.1|AV922724 AV922724 K. Sato unpublished cDNA li... 58 5e-007
gb|BJ545696.1|BJ545696 BJ545696 K. Sato unpublished cDNA li... 58 5e-007
gb|BF624576.2|BF624576 HVSMEa0017C18f Hordeum vulgare seedl... 56 2e-006
gb|BF623533.3|BF623533 HVSMEa0002J15f Hordeum vulgare seedl... 56 2e-006
gb|BF628237.2|BF628237 HVSMEb0003H24f Hordeum vulgare seedl... 56 2e-006
gb|BF260718.2|BF260718 HVSMEf0022M04f Hordeum vulgare seedl... 56 2e-006
gb|BI946932.1|BI946932 HVSMEl0002N24f Hordeum vulgare spike... 56 2e-006
gb|BI947729.1|BI947729 HVSMEl0006K08f Hordeum vulgare spike... 56 2e-006
gb|BI948891.1|BI948891 HVSMEl0011E18f Hordeum vulgare spike... 56 2e-006
gb|BE214034.1|BE214034 HV_CEb0001P12f Hordeum vulgare seedl... 56 2e-006
gb|BE215069.1|BE215069 HV_CEb0005L08f Hordeum vulgare seedl... 56 2e-006
gb|BE215347.2|BE215347 HV_CEb0006I19f Hordeum vulgare seedl... 56 2e-006
gb|BF630948.3|BF630948 HVSMEb0014I05f Hordeum vulgare seedl... 56 2e-006
gb|BF254086.3|BF254086 HVSMEf0002P20f Hordeum vulgare seedl... 56 2e-006
gb|BF263502.3|BF263502 HV_CEa0006O15f Hordeum vulgare seedl... 56 2e-006
gb|BQ740072.1|BQ740072 HC04F04 HC Hordeum vulgare subsp. vu... 56 2e-006
gb|BJ546043.1|BJ546043 BJ546043 K. Sato unpublished cDNA li... 56 2e-006
gb|BI953615.1|BI953615 HVSMEm0013J07f Hordeum vulgare green... 54 8e-006
gb|BI954877.1|BI954877 HVSMEm0020D03f Hordeum vulgare green... 54 8e-006
gb|BF065604.1|BF065604 HV_CEb0012O15f Hordeum vulgare seedl... 54 8e-006
gb|BF267015.2|BF267015 HV_CEa0016L05f Hordeum vulgare seedl... 54 8e-006
gb|BF623190.3|BF623190 HVSMEa0015C04f Hordeum vulgare seedl... 52 3e-005
gb|BF255671.2|BF255671 HVSMEf0007H20f Hordeum vulgare seedl... 52 3e-005
gb|BF267321.1|BF267321 HV_CEa0017J04f Hordeum vulgare seedl... 52 3e-005
gb|BG415059.1|BG415059 HVSMEk0004P20f Hordeum vulgare testa... 52 3e-005
gb|BF256426.3|BF256426 HVSMEf0009J14f Hordeum vulgare seedl... 52 3e-005
gb|BM375129.2|BM375129 EBem06_SQ002_H03_R embryo, 21 DPA, n... 52 3e-005
gb|BQ766165.1|BQ766165 EBro08_SQ005_P05_R root, 3 week, dro... 52 3e-005
gb|CA018052.1|CA018052 HV07E12r HV Hordeum vulgare subsp. v... 52 3e-005
gb|AL504826.1|AL504826 AL504826 Hordeum vulgare Barke roots... 50 1e-004
gb|BG299996.1|BG299996 HVSMEa0022O20f Hordeum vulgare seedl... 50 1e-004
gb|BE216829.1|BE216829 HV_CEb0011L16f Hordeum vulgare seedl... 50 1e-004
gb|BF065573.1|BF065573 HV_CEb0012M23f Hordeum vulgare seedl... 50 1e-004
gb|BF622296.2|BF622296 HVSMEa0002K01f Hordeum vulgare seedl... 48 5e-004
gb|BF622298.2|BF622298 HVSMEa0002K03f Hordeum vulgare seedl... 48 5e-004
gb|BF625356.2|BF625356 HVSMEa0008J19f Hordeum vulgare seedl... 48 5e-004
gb|BF624359.3|BF624359 HVSMEa0014E11f Hordeum vulgare seedl... 48 5e-004
gb|BF255920.2|BF255920 HVSMEf0008D10f Hordeum vulgare seedl... 48 5e-004
gb|AV934275.1|AV934275 AV934275 K. Sato unpublished cDNA li... 48 5e-004
gb|AV936531.1|AV936531 AV936531 K. Sato unpublished cDNA li... 48 5e-004
gb|AJ435050.1|AJ435050 AJ435050 S00002 Hordeum vulgare subs... 48 5e-004
gb|BJ472740.1|BJ472740 BJ472740 K. Sato unpublished cDNA li... 48 5e-004
gb|BJ476709.1|BJ476709 BJ476709 K. Sato unpublished cDNA li... 48 5e-004
gb|BI946599.1|BI946599 HVSMEl0001A18f Hordeum vulgare spike... 46 0.002
gb|AL500273.1|AL500273 AL500273 Hordeum vulgare Barke etiol... 44 0.008
gb|AL503324.1|AL503324 AL503324 Hordeum vulgare Barke roots... 44 0.008
gb|BF622191.2|BF622191 HVSMEa0001P16f Hordeum vulgare seedl... 44 0.008
gb|BF622224.2|BF622224 HVSMEa0002C05f Hordeum vulgare seedl... 44 0.008
gb|BF622265.2|BF622265 HVSMEa0002G13f Hordeum vulgare seedl... 44 0.008
gb|BF622512.2|BF622512 HVSMEa0004K18f Hordeum vulgare seedl... 44 0.008
gb|BF625550.2|BF625550 HVSMEa0011E08f Hordeum vulgare seedl... 44 0.008
gb|BF621550.2|BF621550 HVSMEa0011F24f Hordeum vulgare seedl... 44 0.008
gb|BF624202.2|BF624202 HVSMEa0012J22f Hordeum vulgare seedl... 44 0.008
gb|BF623386.2|BF623386 HVSMEa0016I09f Hordeum vulgare seedl... 44 0.008
gb|BF624618.2|BF624618 HVSMEa0017E14f Hordeum vulgare seedl... 44 0.008
gb|BG299731.1|BG299731 HVSMEa0021J09f Hordeum vulgare seedl... 44 0.008
gb|BF621862.3|BF621862 HVSMEa0001C05f Hordeum vulgare seedl... 44 0.008
gb|BF622215.3|BF622215 HVSMEa0002A20f Hordeum vulgare seedl... 44 0.008
gb|BF622626.3|BF622626 HVSMEa0007G11f Hordeum vulgare seedl... 44 0.008
gb|BF631562.2|BF631562 HVSMEb0016G15f Hordeum vulgare seedl... 44 0.008
gb|BF253803.2|BF253803 HVSMEf0002C17f Hordeum vulgare seedl... 44 0.008
gb|BF257478.2|BF257478 HVSMEf0013A10f Hordeum vulgare seedl... 44 0.008
gb|BF257698.2|BF257698 HVSMEf0013K02f Hordeum vulgare seedl... 44 0.008
gb|BF258539.2|BF258539 HVSMEf0016A04f Hordeum vulgare seedl... 44 0.008
gb|BI949705.1|BI949705 HVSMEl0015H08f Hordeum vulgare spike... 44 0.008
gb|BI950533.1|BI950533 HVSMEl0021D14f Hordeum vulgare spike... 44 0.008
gb|BF629286.3|BF629286 HVSMEb0010K15f Hordeum vulgare seedl... 44 0.008
gb|BF259824.3|BF259824 HVSMEf0020F20f Hordeum vulgare seedl... 44 0.008
gb|BE195630.3|BE195630 HVSMEh0089P24f Hordeum vulgare 5-45 ... 44 0.008
gb|AJ435107.1|AJ435107 AJ435107 S00002 Hordeum vulgare subs... 44 0.008
gb|BQ465287.1|BQ465287 HU03D01r HU Hordeum vulgare subsp. v... 44 0.008
gb|BQ466487.1|BQ466487 HT02K21r HT Hordeum vulgare subsp. v... 44 0.008
gb|BM442923.2|BM442923 EBro02_SQ001_N17_R root, 3 week, hyd... 44 0.008
gb|BQ765875.1|BQ765875 EBro03_SQ008_M07_R root, 3 week, wat... 44 0.008
gb|CA003018.1|CA003018 HS09C19r HS Hordeum vulgare subsp. v... 44 0.008
gb|CA004703.1|CA004703 HS18G22r HS Hordeum vulgare subsp. v... 44 0.008
gb|CA007742.1|CA007742 HU08O02r HU Hordeum vulgare subsp. v... 44 0.008
gb|CA012539.1|CA012539 HT05L11r HT Hordeum vulgare subsp. v... 44 0.008
gb|CA017465.1|CA017465 HV05E15r HV Hordeum vulgare subsp. v... 44 0.008
gb|CA017476.1|CA017476 HV05F04r HV Hordeum vulgare subsp. v... 44 0.008
gb|CA019652.1|CA019652 HV12K19r HV Hordeum vulgare subsp. v... 44 0.008
gb|AL500360.1|AL500360 AL500360 Hordeum vulgare Barke etiol... 42 0.032
gb|AV833639.1|AV833639 AV833639 K. Sato unpublished cDNA li... 42 0.032
gb|BF623684.2|BF623684 HVSMEa0003M02f Hordeum vulgare seedl... 42 0.032
gb|BF623830.2|BF623830 HVSMEa0007D03f Hordeum vulgare seedl... 42 0.032
gb|BF253797.2|BF253797 HVSMEf0002C11f Hordeum vulgare seedl... 42 0.032
gb|BI948106.1|BI948106 HVSMEl0008D16f Hordeum vulgare spike... 42 0.032
gb|BI949974.1|BI949974 HVSMEl0017G12f Hordeum vulgare spike... 42 0.032
gb|BM816595.1|BM816595 HB107A12_SK.ab1 HB Hordeum vulgare s... 42 0.032
gb|BQ464763.1|BQ464763 HU01G03T HU Hordeum vulgare subsp. v... 42 0.032
gb|BQ466342.1|BQ466342 HT02E05r HT Hordeum vulgare subsp. v... 42 0.032
gb|BQ466475.1|BQ466475 HT02K07r HT Hordeum vulgare subsp. v... 42 0.032
gb|BQ466550.1|BQ466550 HT02N19r HT Hordeum vulgare subsp. v... 42 0.032
gb|BQ294525.1|BQ294525 LP10262 Lemma/palea-enriched cDNA li... 42 0.032
gb|BQ663209.1|BQ663209 HU01G03w HU Hordeum vulgare subsp. v... 42 0.032
gb|BI777370.2|BI777370 EBro04_SQ001_A06_R root, 3 week, sal... 42 0.032
gb|BQ763153.1|BQ763153 EBro02_SQ007_K08_R root, 3 week, hyd... 42 0.032
gb|BQ766637.1|BQ766637 EBro08_SQ006_N18_R root, 3 week, dro... 42 0.032
gb|CA004080.1|CA004080 HS16H17r HS Hordeum vulgare subsp. v... 42 0.032
gb|CA013624.1|CA013624 HT09A14r HT Hordeum vulgare subsp. v... 42 0.032
gb|CA014093.1|CA014093 HT10F20r HT Hordeum vulgare subsp. v... 42 0.032
gb|CA014188.1|CA014188 HT10K07r HT Hordeum vulgare subsp. v... 42 0.032
gb|CA014271.1|CA014271 HT10O05r HT Hordeum vulgare subsp. v... 42 0.032
gb|CA014392.1|CA014392 HT11D14r HT Hordeum vulgare subsp. v... 42 0.032
gb|CA015258.1|CA015258 HT13M04r HT Hordeum vulgare subsp. v... 42 0.032
gb|CA015289.1|CA015289 HT13N17r HT Hordeum vulgare subsp. v... 42 0.032
gb|CA015381.1|CA015381 HT14C07r HT Hordeum vulgare subsp. v... 42 0.032
gb|CA015590.1|CA015590 HT14M12r HT Hordeum vulgare subsp. v... 42 0.032
gb|BF622292.2|BF622292 HVSMEa0002I21f Hordeum vulgare seedl... 40 0.13
gb|BF625649.2|BF625649 HVSMEa0013B21f Hordeum vulgare seedl... 40 0.13
gb|BF625840.2|BF625840 HVSMEa0013N01f Hordeum vulgare seedl... 40 0.13
gb|BF255189.1|BF255189 HVSMEf0006D04f Hordeum vulgare seedl... 40 0.13
gb|BF619363.2|BF619363 HVSMEc0016M05f Hordeum vulgare seedl... 40 0.13
gb|BF620788.2|BF620788 HVSMEc0020N16f Hordeum vulgare seedl... 40 0.13
gb|BF254945.2|BF254945 HVSMEf0005H21f Hordeum vulgare seedl... 40 0.13
gb|BI948705.1|BI948705 HVSMEl0010J03f Hordeum vulgare spike... 40 0.13
gb|BI954642.1|BI954642 HVSMEm0018P22f Hordeum vulgare green... 40 0.13
gb|BE558770.2|BE558770 HV_CEb0020E13f Hordeum vulgare seedl... 40 0.13
gb|BI959586.1|BI959586 HVSMEn0020E21f Hordeum vulgare rachi... 40 0.13
gb|BE196145.3|BE196145 HVSMEh0091H19f Hordeum vulgare 5-45 ... 40 0.13
gb|BE196654.3|BE196654 HVSMEh0092O09f Hordeum vulgare 5-45 ... 40 0.13
gb|AV932609.1|AV932609 AV932609 K. Sato unpublished cDNA li... 40 0.13
gb|BJ471554.1|BJ471554 BJ471554 K. Sato unpublished cDNA li... 40 0.13
gb|BQ460114.1|BQ460114 HA07C20r HA Hordeum vulgare subsp. v... 40 0.13
gb|BQ467510.1|BQ467510 HS04A05r HS Hordeum vulgare subsp. v... 40 0.13
gb|BQ467646.1|BQ467646 HS04G23r HS Hordeum vulgare subsp. v... 40 0.13
gb|BM369749.2|BM369749 EBem07_SQ004_H24_R embryo, 28 DPA, n... 40 0.13
gb|BI776549.2|BI776549 EBpi05_SQ001_N14_R pistil, 8 DPA, no... 40 0.13
gb|BQ765092.1|BQ765092 EBca01_SQ005_D19_R carpel, pre-anthe... 40 0.13
gb|CA001613.1|CA001613 HS05B06r HS Hordeum vulgare subsp. v... 40 0.13
gb|CA001781.1|CA001781 HS05J03r HS Hordeum vulgare subsp. v... 40 0.13
gb|CA004785.1|CA004785 HS18K23r HS Hordeum vulgare subsp. v... 40 0.13
gb|CA012182.1|CA012182 HT04L19r HT Hordeum vulgare subsp. v... 40 0.13
gb|CA023217.1|CA023217 HZ45J07r HZ Hordeum vulgare subsp. v... 40 0.13
gb|CA024893.1|CA024893 HZ50K02r HZ Hordeum vulgare subsp. v... 40 0.13
gb|CA025920.1|CA025920 HZ53I14r HZ Hordeum vulgare subsp. v... 40 0.13
gb|CA027026.1|CA027026 HZ57K21r HZ Hordeum vulgare subsp. v... 40 0.13
gb|CA027925.1|CA027925 HZ60H09r HZ Hordeum vulgare subsp. v... 40 0.13
gb|CA028145.1|CA028145 HZ61C04r HZ Hordeum vulgare subsp. v... 40 0.13
gb|CA028873.1|CA028873 HZ63H22r HZ Hordeum vulgare subsp. v... 40 0.13
gb|CA029001.1|CA029001 HZ63O10r HZ Hordeum vulgare subsp. v... 40 0.13
gb|CA029484.1|CA029484 HZ65F17r HZ Hordeum vulgare subsp. v... 40 0.13
gb|CK122333.1|CK122333 BES1824102o06 BES1824 Hordeum vulgar... 40 0.13
gb|CK125646.1|CK125646 BES1824109j16 BES1824 Hordeum vulgar... 40 0.13
gb|AF109194.1|AF109194 Hordeum vulgare glutathione-S-transf... 40 0.13
gb|BF623115.2|BF623115 HVSMEa0014H14f Hordeum vulgare seedl... 38 0.50
gb|BF622762.3|BF622762 HVSMEa0008I16f Hordeum vulgare seedl... 38 0.50
gb|BF619549.2|BF619549 HVSMEc0004A15f Hordeum vulgare seedl... 38 0.50
gb|BI952709.1|BI952709 HVSMEm0007I05f Hordeum vulgare green... 38 0.50
gb|BQ459140.1|BQ459140 HA02D12r HA Hordeum vulgare subsp. v... 38 0.50
gb|BQ466028.1|BQ466028 HT01F24T HT Hordeum vulgare subsp. v... 38 0.50
gb|BQ466201.1|BQ466201 HT01N24T HT Hordeum vulgare subsp. v... 38 0.50
gb|BM375482.2|BM375482 EBem06_SQ003_H18_R embryo, 21 DPA, n... 38 0.50
gb|BM099717.2|BM099717 EBes01_SQ004_B07_R embryo sac, 4-6 D... 38 0.50
gb|BQ766372.1|BQ766372 EBro08_SQ005_E23 _R root, 3 week, dr... 38 0.50
gb|BU976310.1|BU976310 HA03H24r HA Hordeum vulgare subsp. v... 38 0.50
gb|BU978413.1|BU978413 HA13C15r HA Hordeum vulgare subsp. v... 38 0.50
gb|BU983339.1|BU983339 HA29G10r HA Hordeum vulgare subsp. v... 38 0.50
gb|CA004877.1|CA004877 HS18P04r HS Hordeum vulgare subsp. v... 38 0.50
gb|AY137517.1| Hordeum vulgare subsp. vulgare hypersensitiv... 38 0.50
>gb|BM369733.2|BM369733 EBem07_SQ004_H07_R embryo, 28 DPA, no treatment, cv Optic, EBem07
Hordeum vulgare subsp. vulgare cDNA clone
EBem07_SQ004_H07 5', mRNA sequence
Length = 484
Score = 228 bits (115), Expect = 3e-058
Identities = 264/311 (84%), Gaps = 2/311 (0%)
Strand = Plus / Plus
Query: 82 ggcgagctgcagctgctgggctcatggtacagcccctacgtgatccgcgccaaggtggcg 141
||||||||||||||||||||| | ||| |||||||| |||||||||| ||||||||
Sbjct: 68 ggcgagctgcagctgctgggcgcttggatgagcccctatgtgatccgcgtgaaggtggcc 127
Query: 142 ctggggctgaaggggctcagctacgagttcgtcgaggaggacctctcccgcaagagcgac 201
||| | ||||||||||||||||||| | | ||||| ||||||| | ||||||||||
Sbjct: 128 ctgcagatgaaggggctcagctacgactacatcgagcaggacctgcagcacaagagcgac 187
Query: 202 ctgctgctgaagctc-aacccggtgcacaggaaggtgcccgtgctggtccacggcggccg 260
|| ||||| | |||| ||||||||||||| |||||| ||||||||| |||||| ||||||
Sbjct: 188 ctcctgctca-gctccaacccggtgcacaagaaggtccccgtgctgatccacgacggccg 246
Query: 261 ccccgtgtgcgagtcgctcgtcatcctgcagtacgtcgacgagacctgggcaggcaccgg 320
|| |||||||||||||||||| |||| |||||||||||||| | ||||| || |||||
Sbjct: 247 gccggtgtgcgagtcgctcgtcgtcctcgagtacgtcgacgaggcgtgggccgggaccgg 306
Query: 321 gacccctctcctccccgccgacgcctacgaccgcgccatggctcgcttctgggcagccta 380
| | || ||||||||||||||| |||||||||||||| | |||||||||||||| ||||
Sbjct: 307 gccgcccctcctccccgccgacccctacgaccgcgccgtcgctcgcttctgggccaccta 366
Query: 381 cgtcgacgaca 391
|||| ||||||
Sbjct: 367 cgtcaacgaca 377
>gb|AV913623.1|AV913623 AV913623 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags22l18 5', mRNA sequence
Length = 676
Score = 117 bits (59), Expect = 7e-025
Identities = 182/223 (81%)
Strand = Plus / Plus
Query: 171 cgtcgaggaggacctctcccgcaagagcgacctgctgctgaagctcaacccggtgcacag 230
|||||||||||||||| || ||||||||| || || || || |||||||| ||| |
Sbjct: 180 cgtcgaggaggacctcgccaacaagagcgaactcctcctcgagtccaacccggcgcagaa 239
Query: 231 gaaggtgcccgtgctggtccacggcggccgccccgtgtgcgagtcgctcgtcatcctgca 290
||||||||||||||| |||| |||| ||||| ||||| |||| |||||| ||||
Sbjct: 240 gaaggtgcccgtgctcatccataacggcaagcccgtctgcgactcgcaggtcatcgtgca 299
Query: 291 gtacgtcgacgagacctgggcaggcaccgggacccctctcctccccgccgacgcctacga 350
|||| |||||||| ||| |||| |||||| ||||||||||||||||| |||||||
Sbjct: 300 gtacatcgacgaggccttcagcggcaacgggacatctctcctccccgccgacccctacga 359
Query: 351 ccgcgccatggctcgcttctgggcagcctacgtcgacgacaag 393
|||||| | |||||||||||||| ||||||||||||||||||
Sbjct: 360 gcgcgccgtcgctcgcttctgggccgcctacgtcgacgacaag 402
>gb|BQ471126.1|BQ471126 HV01D06T HV Hordeum vulgare subsp. vulgare cDNA clone HV01D06
5-PRIME, mRNA sequence
Length = 629
Score = 117 bits (59), Expect = 7e-025
Identities = 182/223 (81%)
Strand = Plus / Plus
Query: 171 cgtcgaggaggacctctcccgcaagagcgacctgctgctgaagctcaacccggtgcacag 230
|||||||||||||||| || ||||||||| || || || || |||||||| ||| |
Sbjct: 170 cgtcgaggaggacctcgccaacaagagcgaactcctcctcgagtccaacccggcgcagaa 229
Query: 231 gaaggtgcccgtgctggtccacggcggccgccccgtgtgcgagtcgctcgtcatcctgca 290
||||||||||||||| |||| |||| ||||| ||||| |||| |||||| ||||
Sbjct: 230 gaaggtgcccgtgctcatccataacggcaagcccgtctgcgactcgcaggtcatcgtgca 289
Query: 291 gtacgtcgacgagacctgggcaggcaccgggacccctctcctccccgccgacgcctacga 350
|||| |||||||| ||| |||| |||||| ||||||||||||||||| |||||||
Sbjct: 290 gtacatcgacgaggccttcagcggcaacgggacgtctctcctccccgccgacccctacga 349
Query: 351 ccgcgccatggctcgcttctgggcagcctacgtcgacgacaag 393
|||||| | |||||||||||||| ||||||||||||||||||
Sbjct: 350 gcgcgccgtcgctcgcttctgggccgcctacgtcgacgacaag 392
>gb|BQ472178.1|BQ472178 HV04K06r HV Hordeum vulgare subsp. vulgare cDNA clone HV04K06
5-PRIME, mRNA sequence
Length = 414
Score = 117 bits (59), Expect = 7e-025
Identities = 182/223 (81%)
Strand = Plus / Plus
Query: 171 cgtcgaggaggacctctcccgcaagagcgacctgctgctgaagctcaacccggtgcacag 230
|||||||||||||||| || ||||||||| || || || || |||||||| ||| |
Sbjct: 170 cgtcgaggaggacctcgccaacaagagcgaactcctcctcgagtccaacccggcgcagaa 229
Query: 231 gaaggtgcccgtgctggtccacggcggccgccccgtgtgcgagtcgctcgtcatcctgca 290
||||||||||||||| |||| |||| ||||| ||||| |||| |||||| ||||
Sbjct: 230 gaaggtgcccgtgctcatccataacggcaagcccgtctgcgactcgcaggtcatcgtgca 289
Query: 291 gtacgtcgacgagacctgggcaggcaccgggacccctctcctccccgccgacgcctacga 350
|||| |||||||| ||| |||| |||||| ||||||||||||||||| |||||||
Sbjct: 290 gtacatcgacgaggccttcagcggcaacgggacgtctctcctccccgccgacccctacga 349
Query: 351 ccgcgccatggctcgcttctgggcagcctacgtcgacgacaag 393
|||||| | |||||||||||||| ||||||||||||||||||
Sbjct: 350 gcgcgccgtcgctcgcttctgggccgcctacgtcgacgacaag 392
>gb|BF259078.2|BF259078 HVSMEf0017J19f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0017J19f, mRNA sequence
Length = 834
Score = 103 bits (52), Expect = 1e-020
Identities = 147/178 (82%), Gaps = 3/178 (1%)
Strand = Plus / Plus
Query: 216 caacccggtgcacaggaaggtgcccgtgctggtccacggcggccgccccgtgtgcgagtc 275
|||||||||||||| ||||||||||||||| ||||| |||| || | ||||||||
Sbjct: 143 caacccggtgcacaagaaggtgcccgtgctcatccacaacggcgtgccgctctgcgagtc 202
Query: 276 gctcgtcatcctgcagtacgtcgacgagacctgggcaggcaccgggacccctctcctccc 335
|| |||||| ||||||||||||||||| |||| | | |||| |||| |||||||
Sbjct: 203 gcaggtcatcgtgcagtacgtcgacgaggtctggtccg---ccggcgcccccatcctccc 259
Query: 336 cgccgacgcctacgaccgcgccatggctcgcttctgggcagcctacgtcgacgacaag 393
||||||| |||||| |||||||| || ||||||||||| ||||||||||||||||||
Sbjct: 260 cgccgacccctacgcccgcgccaccgcccgcttctgggccgcctacgtcgacgacaag 317
>gb|BG368894.1|BG368894 HVSMEi0021D06f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0021D06f, mRNA sequence
Length = 793
Score = 103 bits (52), Expect = 1e-020
Identities = 147/178 (82%), Gaps = 3/178 (1%)
Strand = Plus / Plus
Query: 216 caacccggtgcacaggaaggtgcccgtgctggtccacggcggccgccccgtgtgcgagtc 275
|||||||||||||| ||||||||||||||| ||||| |||| || | ||||||||
Sbjct: 160 caacccggtgcacaagaaggtgcccgtgctcatccacaacggcgtgccgctctgcgagtc 219
Query: 276 gctcgtcatcctgcagtacgtcgacgagacctgggcaggcaccgggacccctctcctccc 335
|| |||||| ||||||||||||||||| |||| | | |||| |||| |||||||
Sbjct: 220 gcaggtcatcgtgcagtacgtcgacgaggtctggtccg---ccggcgcccccatcctccc 276
Query: 336 cgccgacgcctacgaccgcgccatggctcgcttctgggcagcctacgtcgacgacaag 393
||||||| |||||| |||||||| || ||||||||||| ||||||||||||||||||
Sbjct: 277 cgccgacccctacgcccgcgccaccgcccgcttctgggccgcctacgtcgacgacaag 334
>gb|BE214950.1|BE214950 HV_CEb0005F03f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0005F03f, mRNA sequence
Length = 946
Score = 103 bits (52), Expect = 1e-020
Identities = 142/172 (82%)
Strand = Plus / Plus
Query: 216 caacccggtgcacaggaaggtgcccgtgctggtccacggcggccgccccgtgtgcgagtc 275
|||||||||||||| |||||| || ||||| |||||| |||| || | ||||||||
Sbjct: 152 caacccggtgcacatgaaggtcccggtgctcatccacgacggcaaatccatctgcgagtc 211
Query: 276 gctcgtcatcctgcagtacgtcgacgagacctgggcaggcaccgggacccctctcctccc 335
||| | |||| ||||||||||||||||| |||||| | ||| || ||| | |||||||
Sbjct: 212 gctggccatcgtgcagtacgtcgacgaggtctgggccgccacgggcacctccatcctccc 271
Query: 336 cgccgacgcctacgaccgcgccatggctcgcttctgggcagcctacgtcgac 387
||||||| |||||||||||||| |||||||||||||| ||||||| ||||
Sbjct: 272 cgccgacccctacgaccgcgccgccgctcgcttctgggccgcctacgccgac 323
>gb|AV908971.1|AV908971 AV908971 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak11b21 5', mRNA sequence
Length = 552
Score = 103 bits (52), Expect = 1e-020
Identities = 142/172 (82%)
Strand = Plus / Plus
Query: 216 caacccggtgcacaggaaggtgcccgtgctggtccacggcggccgccccgtgtgcgagtc 275
|||||||||||||| |||||| || ||||| |||||| |||| || | ||||||||
Sbjct: 142 caacccggtgcacatgaaggtcccggtgctcatccacgacggcaaatccatctgcgagtc 201
Query: 276 gctcgtcatcctgcagtacgtcgacgagacctgggcaggcaccgggacccctctcctccc 335
||| | |||| ||||||||||||||||| |||||| | ||| || ||| | |||||||
Sbjct: 202 gctggccatcgtgcagtacgtcgacgaggtctgggccgccacgggcacctccatcctccc 261
Query: 336 cgccgacgcctacgaccgcgccatggctcgcttctgggcagcctacgtcgac 387
||||||| |||||||||||||| |||||||||||||| ||||||| ||||
Sbjct: 262 cgccgacccctacgaccgcgccgccgctcgcttctgggccgcctacgccgac 313
>gb|BM375338.2|BM375338 EBem06_SQ003_A18_R embryo, 21 DPA, no treatment, cv Optic, EBem06
Hordeum vulgare subsp. vulgare cDNA clone
EBem06_SQ003_A18 5', mRNA sequence
Length = 480
Score = 103 bits (52), Expect = 1e-020
Identities = 147/178 (82%), Gaps = 3/178 (1%)
Strand = Plus / Plus
Query: 216 caacccggtgcacaggaaggtgcccgtgctggtccacggcggccgccccgtgtgcgagtc 275
|||||||||||||| ||||||||||||||| ||||| |||| || | ||||||||
Sbjct: 166 caacccggtgcacaagaaggtgcccgtgctcatccacaacggcgtgccgctctgcgagtc 225
Query: 276 gctcgtcatcctgcagtacgtcgacgagacctgggcaggcaccgggacccctctcctccc 335
|| |||||| ||||||||||||||||| |||| | | |||| |||| |||||||
Sbjct: 226 gcaggtcatcgtgcagtacgtcgacgaggtctggcccg---ccggcgcccccatcctccc 282
Query: 336 cgccgacgcctacgaccgcgccatggctcgcttctgggcagcctacgtcgacgacaag 393
||||||| |||||| |||||||| || ||||||||||| ||||||||||||||||||
Sbjct: 283 cgccgacccctacgcccgcgccaccgcccgcttctgggccgcctacgtcgacgacaag 340
>gb|BQ762933.1|BQ762933 EBro02_SQ006_H16 _R root, 3 week, hydroponic grown, low nitrogen,
cv Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA
clone EBro02_SQ006_H16 5', mRNA sequence
Length = 701
Score = 103 bits (52), Expect = 1e-020
Identities = 142/172 (82%)
Strand = Plus / Plus
Query: 216 caacccggtgcacaggaaggtgcccgtgctggtccacggcggccgccccgtgtgcgagtc 275
|||||||||||||| |||||| || ||||| |||||| |||| || | ||||||||
Sbjct: 117 caacccggtgcacatgaaggtcccggtgctcatccacgacggcaaatccatctgcgagtc 176
Query: 276 gctcgtcatcctgcagtacgtcgacgagacctgggcaggcaccgggacccctctcctccc 335
||| | |||| ||||||||||||||||| |||||| | ||| || ||| | |||||||
Sbjct: 177 gctggccatcgtgcagtacgtcgacgaggtctgggccgccacgggcacctccatcctccc 236
Query: 336 cgccgacgcctacgaccgcgccatggctcgcttctgggcagcctacgtcgac 387
||||||| |||||||||||||| |||||||||||||| ||||||| ||||
Sbjct: 237 cgccgacccctacgaccgcgccgccgctcgcttctgggccgcctacgccgac 288
>gb|CA011829.1|CA011829 HT03K17r HT Hordeum vulgare subsp. vulgare cDNA clone HT03K17
5-PRIME, mRNA sequence
Length = 558
Score = 103 bits (52), Expect = 1e-020
Identities = 142/172 (82%)
Strand = Plus / Plus
Query: 216 caacccggtgcacaggaaggtgcccgtgctggtccacggcggccgccccgtgtgcgagtc 275
|||||||||||||| |||||| || ||||| |||||| |||| || | ||||||||
Sbjct: 113 caacccggtgcacatgaaggtcccggtgctcatccacgacggcaaatccatctgcgagtc 172
Query: 276 gctcgtcatcctgcagtacgtcgacgagacctgggcaggcaccgggacccctctcctccc 335
||| | |||| ||||||||||||||||| |||||| | ||| || ||| | |||||||
Sbjct: 173 gctggccatcgtgcagtacgtcgacgaggtctgggccgccacgggcacctccatcctccc 232
Query: 336 cgccgacgcctacgaccgcgccatggctcgcttctgggcagcctacgtcgac 387
||||||| |||||||||||||| |||||||||||||| ||||||| ||||
Sbjct: 233 cgccgacccctacgaccgcgccgccgctcgcttctgggccgcctacgccgac 284
>gb|CA012122.1|CA012122 HT04I07r HT Hordeum vulgare subsp. vulgare cDNA clone HT04I07
5-PRIME, mRNA sequence
Length = 452
Score = 103 bits (52), Expect = 1e-020
Identities = 112/132 (84%)
Strand = Plus / Plus
Query: 262 cccgtgtgcgagtcgctcgtcatcctgcagtacgtcgacgagacctgggcaggcaccggg 321
||||| ||||| |||| |||||| |||||||| |||||||| ||| |||| ||||
Sbjct: 21 cccgtctgcgactcgcaggtcatcgtgcagtacatcgacgaggccttcagcggcaacggg 80
Query: 322 acccctctcctccccgccgacgcctacgaccgcgccatggctcgcttctgggcagcctac 381
|| ||||||||||||||||| ||||||| |||||| | |||||||||||||| ||||||
Sbjct: 81 acgtctctcctccccgccgacccctacgagcgcgccgtcgctcgcttctgggccgcctac 140
Query: 382 gtcgacgacaag 393
||||||||||||
Sbjct: 141 gtcgacgacaag 152
>gb|CA013731.1|CA013731 HT09F05r HT Hordeum vulgare subsp. vulgare cDNA clone HT09F05
5-PRIME, mRNA sequence
Length = 615
Score = 103 bits (52), Expect = 1e-020
Identities = 142/172 (82%)
Strand = Plus / Plus
Query: 216 caacccggtgcacaggaaggtgcccgtgctggtccacggcggccgccccgtgtgcgagtc 275
|||||||||||||| |||||| || ||||| |||||| |||| || | ||||||||
Sbjct: 149 caacccggtgcacatgaaggtcccggtgctcatccacgacggcaaatccatctgcgagtc 208
Query: 276 gctcgtcatcctgcagtacgtcgacgagacctgggcaggcaccgggacccctctcctccc 335
||| | |||| ||||||||||||||||| |||||| | ||| || ||| | |||||||
Sbjct: 209 gctggccatcgtgcagtacgtcgacgaggtctgggccgccacgggcacctccatcctccc 268
Query: 336 cgccgacgcctacgaccgcgccatggctcgcttctgggcagcctacgtcgac 387
||||||| |||||||||||||| |||||||||||||| ||||||| ||||
Sbjct: 269 cgccgacccctacgaccgcgccgccgctcgcttctgggccgcctacgccgac 320
>gb|CA022668.1|CA022668 HZ44A05r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ44A05
5-PRIME, mRNA sequence
Length = 588
Score = 103 bits (52), Expect = 1e-020
Identities = 147/178 (82%), Gaps = 3/178 (1%)
Strand = Plus / Plus
Query: 216 caacccggtgcacaggaaggtgcccgtgctggtccacggcggccgccccgtgtgcgagtc 275
|||||||||||||| ||||||||||||||| ||||| |||| || | ||||||||
Sbjct: 171 caacccggtgcacaagaaggtgcccgtgctcatccacaacggcgtgccgctctgcgagtc 230
Query: 276 gctcgtcatcctgcagtacgtcgacgagacctgggcaggcaccgggacccctctcctccc 335
|| |||||| ||||||||||||||||| |||| | | |||| |||| |||||||
Sbjct: 231 gcaggtcatcgtgcagtacgtcgacgaggtctggcccg---ccggcgcccccatcctccc 287
Query: 336 cgccgacgcctacgaccgcgccatggctcgcttctgggcagcctacgtcgacgacaag 393
||||||| |||||| |||||||| || ||||||||||| ||||||||||||||||||
Sbjct: 288 cgccgacccctacgcccgcgccaccgcccgcttctgggccgcctacgtcgacgacaag 345
>gb|BJ544235.1|BJ544235 BJ544235 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak22d17 5', mRNA sequence
Length = 606
Score = 103 bits (52), Expect = 1e-020
Identities = 142/172 (82%)
Strand = Plus / Plus
Query: 216 caacccggtgcacaggaaggtgcccgtgctggtccacggcggccgccccgtgtgcgagtc 275
|||||||||||||| |||||| || ||||| |||||| |||| || | ||||||||
Sbjct: 142 caacccggtgcacatgaaggtcccggtgctcatccacgacggcaaatccatctgcgagtc 201
Query: 276 gctcgtcatcctgcagtacgtcgacgagacctgggcaggcaccgggacccctctcctccc 335
||| | |||| ||||||||||||||||| |||||| | ||| || ||| | |||||||
Sbjct: 202 gctggccatcgtgcagtacgtcgacgaggtctgggccgccacgggcacctccatcctccc 261
Query: 336 cgccgacgcctacgaccgcgccatggctcgcttctgggcagcctacgtcgac 387
||||||| |||||||||||||| |||||||||||||| ||||||| ||||
Sbjct: 262 cgccgacccctacgaccgcgccgccgctcgcttctgggccgcctacgccgac 313
>gb|BJ544573.1|BJ544573 BJ544573 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak31o05 5', mRNA sequence
Length = 605
Score = 103 bits (52), Expect = 1e-020
Identities = 142/172 (82%)
Strand = Plus / Plus
Query: 216 caacccggtgcacaggaaggtgcccgtgctggtccacggcggccgccccgtgtgcgagtc 275
|||||||||||||| |||||| || ||||| |||||| |||| || | ||||||||
Sbjct: 123 caacccggtgcacatgaaggtcccggtgctcatccacgacggcaaatccatctgcgagtc 182
Query: 276 gctcgtcatcctgcagtacgtcgacgagacctgggcaggcaccgggacccctctcctccc 335
||| | |||| ||||||||||||||||| |||||| | ||| || ||| | |||||||
Sbjct: 183 gctggccatcgtgcagtacgtcgacgaggtctgggccgccacgggcacctccatcctccc 242
Query: 336 cgccgacgcctacgaccgcgccatggctcgcttctgggcagcctacgtcgac 387
||||||| |||||||||||||| |||||||||||||| ||||||| ||||
Sbjct: 243 cgccgacccctacgaccgcgccgccgctcgcttctgggccgcctacgccgac 294
>gb|AV918927.1|AV918927 AV918927 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags22l18 3', mRNA sequence
Length = 584
Score = 99.6 bits (50), Expect = 2e-019
Identities = 98/114 (85%)
Strand = Plus / Minus
Query: 280 gtcatcctgcagtacgtcgacgagacctgggcaggcaccgggacccctctcctccccgcc 339
|||||| |||||||| |||||||| ||| |||| |||||| ||||||||||||||
Sbjct: 569 gtcatcgtgcagtacatcgacgaggccttcagcggcaacgggacatctctcctccccgcc 510
Query: 340 gacgcctacgaccgcgccatggctcgcttctgggcagcctacgtcgacgacaag 393
||| ||||||| |||||| | |||||||||||||| ||||||||||||||||||
Sbjct: 509 gacccctacgagcgcgccgtcgctcgcttctgggccgcctacgtcgacgacaag 456
>gb|BE214207.2|BE214207 HV_CEb0002K18f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0002K18f, mRNA sequence
Length = 717
Score = 95.6 bits (48), Expect = 2e-018
Identities = 146/178 (82%), Gaps = 3/178 (1%)
Strand = Plus / Plus
Query: 216 caacccggtgcacaggaaggtgcccgtgctggtccacggcggccgccccgtgtgcgagtc 275
|||||||||||||| ||||||||||||||| ||||| |||| || | ||||||||
Sbjct: 152 caacccggtgcacaagaaggtgcccgtgctcatccacaacggcgtgccgctctgcgagtc 211
Query: 276 gctcgtcatcctgcagtacgtcgacgagacctgggcaggcaccgggacccctctcctccc 335
|| |||||| ||||||||||||||||| |||| | | |||| |||| |||||||
Sbjct: 212 gcaggtcatcgtgcagtacgtcgacgaggtctggcccg---ccggcgcccccatcctccc 268
Query: 336 cgccgacgcctacgaccgcgccatggctcgcttctgggcagcctacgtcgacgacaag 393
||||||| |||||| |||||||| || ||||| ||||| ||||||||||||||||||
Sbjct: 269 cgccgacccctacgcccgcgccaccgcccgcttatgggccgcctacgtcgacgacaag 326
>gb|CA012898.1|CA012898 HT06M15r HT Hordeum vulgare subsp. vulgare cDNA clone HT06M15
5-PRIME, mRNA sequence
Length = 609
Score = 95.6 bits (48), Expect = 2e-018
Identities = 102/120 (85%)
Strand = Plus / Plus
Query: 268 tgcgagtcgctcgtcatcctgcagtacgtcgacgagacctgggcaggcaccgggacccct 327
||||||||||| | |||| ||||||||||||||||| |||||| | ||| || ||| |
Sbjct: 57 tgcgagtcgctggccatcgtgcagtacgtcgacgaggtctgggccgccacgggcacctcc 116
Query: 328 ctcctccccgccgacgcctacgaccgcgccatggctcgcttctgggcagcctacgtcgac 387
|||||||||||||| |||||||||||||| |||||||||||||| ||||||| ||||
Sbjct: 117 atcctccccgccgacccctacgaccgcgccgccgctcgcttctgggccgcctacgccgac 176
>gb|CV058333.1|CV058333 BNEL36h8 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL36h8 5' similar to Oryza sativa,
mRNA sequence
Length = 641
Score = 95.6 bits (48), Expect = 2e-018
Identities = 78/88 (88%)
Strand = Plus / Plus
Query: 216 caacccggtgcacaggaaggtgcccgtgctggtccacggcggccgccccgtgtgcgagtc 275
||||||||||||| | ||||| |||||||| ||||||| |||||| | ||| ||||||||
Sbjct: 15 caacccggtgcaccgcaaggtccccgtgctcgtccacgccggccggctcgtctgcgagtc 74
Query: 276 gctcgtcatcctgcagtacgtcgacgag 303
|||||||||||| || ||||||||||||
Sbjct: 75 gctcgtcatcctccactacgtcgacgag 102
Score = 42.1 bits (21), Expect = 0.032
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 522 cttcttcggcggcgacgccgt 542
|||||||||||||||||||||
Sbjct: 318 cttcttcggcggcgacgccgt 338
Score = 40.1 bits (20), Expect = 0.13
Identities = 50/60 (83%)
Strand = Plus / Plus
Query: 328 ctcctccccgccgacgcctacgaccgcgccatggctcgcttctgggcagcctacgtcgac 387
||||||||||||| |||| ||| |||||| || || |||||||| ||||||||||||
Sbjct: 124 ctcctccccgccggcgcccgcgagcgcgccgccgcgcggttctgggccgcctacgtcgac 183
>gb|CV060337.1|CV060337 BNEL57a4 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL57a4 5' similar to Zea mays
glutathione S-transferase GST 20 mRNA, complete cds,
mRNA sequence
Length = 595
Score = 95.6 bits (48), Expect = 2e-018
Identities = 78/88 (88%)
Strand = Plus / Plus
Query: 216 caacccggtgcacaggaaggtgcccgtgctggtccacggcggccgccccgtgtgcgagtc 275
||||||||||||| | ||||| |||||||| ||||||| |||||| | ||| ||||||||
Sbjct: 15 caacccggtgcaccgcaaggtccccgtgctcgtccacgccggccggctcgtctgcgagtc 74
Query: 276 gctcgtcatcctgcagtacgtcgacgag 303
|||||||||||| || ||||||||||||
Sbjct: 75 gctcgtcatcctccactacgtcgacgag 102
Score = 42.1 bits (21), Expect = 0.032
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 522 cttcttcggcggcgacgccgt 542
|||||||||||||||||||||
Sbjct: 318 cttcttcggcggcgacgccgt 338
Score = 40.1 bits (20), Expect = 0.13
Identities = 50/60 (83%)
Strand = Plus / Plus
Query: 328 ctcctccccgccgacgcctacgaccgcgccatggctcgcttctgggcagcctacgtcgac 387
||||||||||||| |||| ||| |||||| || || |||||||| ||||||||||||
Sbjct: 124 ctcctccccgccggcgcccgcgagcgcgccgccgcgcggttctgggccgcctacgtcgac 183
>gb|BF259796.2|BF259796 HVSMEf0020E15f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0020E15f, mRNA sequence
Length = 532
Score = 91.7 bits (46), Expect = 4e-017
Identities = 145/178 (81%)
Strand = Plus / Plus
Query: 216 caacccggtgcacaggaaggtgcccgtgctggtccacggcggccgccccgtgtgcgagtc 275
|||||||| ||| | ||||||||||||||| |||| |||| ||||| ||||| ||
Sbjct: 9 caacccggcgcaaaagaaggtgcccgtgctcatccataacggcaagcccgtctgcgactc 68
Query: 276 gctcgtcatcctgcagtacgtcgacgagacctgggcaggcaccgggacccctctcctccc 335
|| |||||| |||||||| |||||||| ||| |||| |||||| ||||||||||
Sbjct: 69 gcaggtcatcgtgcagtacatcgacgaggccttcagcggcaacgggacgtctctcctccc 128
Query: 336 cgccgacgcctacgaccgcgccatggctcgcttctgggcagcctacgtcgacgacaag 393
||||||| ||||| | |||||| | |||||||||||||| | ||||||||||||||||
Sbjct: 129 cgccgacccctacaagcgcgccgtcgctcgcttctgggccgtctacgtcgacgacaag 186
>gb|BG299389.1|BG299389 HVSMEa0019L19f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0019L19f, mRNA sequence
Length = 624
Score = 87.7 bits (44), Expect = 6e-016
Identities = 145/178 (81%), Gaps = 3/178 (1%)
Strand = Plus / Plus
Query: 216 caacccggtgcacaggaaggtgcccgtgctggtccacggcggccgccccgtgtgcgagtc 275
|||||||||||||| ||||||||||||||| ||||| |||| || | ||||||||
Sbjct: 199 caacccggtgcacaagaaggtgcccgtgctcatccacaacggcgtgccgctctgcgagtc 258
Query: 276 gctcgtcatcctgcagtacgtcgacgagacctgggcaggcaccgggacccctctcctccc 335
|| |||||| ||||||||||||||||| |||| | | |||| |||| |||||||
Sbjct: 259 gcaggtcatcgtgcagtacgtcgacgaggtctggtccg---ccggcgcccccatcctccc 315
Query: 336 cgccgacgcctacgaccgcgccatggctcgcttctgggcagcctacgtcgacgacaag 393
||||||| |||||| |||||||| || || || ||||| ||||||||||||||||||
Sbjct: 316 cgccgacccctacgcccgcgccaccgcccgtttttgggccgcctacgtcgacgacaag 373
>gb|BF627874.2|BF627874 HVSMEb0006C01f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0006C01f, mRNA sequence
Length = 783
Score = 87.7 bits (44), Expect = 6e-016
Identities = 145/178 (81%), Gaps = 3/178 (1%)
Strand = Plus / Plus
Query: 216 caacccggtgcacaggaaggtgcccgtgctggtccacggcggccgccccgtgtgcgagtc 275
|||||||||||||| ||||||||||||||| ||||| |||| || | ||||||||
Sbjct: 142 caacccggtgcacaagaaggtgcccgtgctcatccacaacggcgtgccgctctgcgagtc 201
Query: 276 gctcgtcatcctgcagtacgtcgacgagacctgggcaggcaccgggacccctctcctccc 335
|| |||||| |||||||||||||| || |||| | | |||| |||| |||||||
Sbjct: 202 gcaggtcatcgtgcagtacgtcgacaaggtctggtccg---ccggcgcccccatcctccc 258
Query: 336 cgccgacgcctacgaccgcgccatggctcgcttctgggcagcctacgtcgacgacaag 393
||||||| |||||| |||||||| || ||||||||||| | ||||||||||||||||
Sbjct: 259 cgccgacccctacgcccgcgccaccgcccgcttctgggccgtctacgtcgacgacaag 316
>gb|BQ469646.1|BQ469646 HZ01H04r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ01H04
5-PRIME, mRNA sequence
Length = 407
Score = 87.7 bits (44), Expect = 6e-016
Identities = 106/126 (84%), Gaps = 3/126 (2%)
Strand = Plus / Plus
Query: 268 tgcgagtcgctcgtcatcctgcagtacgtcgacgagacctgggcaggcaccgggacccct 327
|||||||||| |||||| ||||||||||||||||| |||| | | |||| ||||
Sbjct: 37 tgcgagtcgcaggtcatcgtgcagtacgtcgacgaggtctggcccg---ccggcgccccc 93
Query: 328 ctcctccccgccgacgcctacgaccgcgccatggctcgcttctgggcagcctacgtcgac 387
|||||||||||||| |||||| |||||||| || ||||||||||| ||||||||||||
Sbjct: 94 atcctccccgccgacccctacgcccgcgccaccgcccgcttctgggccgcctacgtcgac 153
Query: 388 gacaag 393
||||||
Sbjct: 154 gacaag 159
>gb|CA027668.1|CA027668 HZ59K12r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ59K12
5-PRIME, mRNA sequence
Length = 442
Score = 87.7 bits (44), Expect = 6e-016
Identities = 106/126 (84%), Gaps = 3/126 (2%)
Strand = Plus / Plus
Query: 268 tgcgagtcgctcgtcatcctgcagtacgtcgacgagacctgggcaggcaccgggacccct 327
|||||||||| |||||| ||||||||||||||||| |||| | | |||| ||||
Sbjct: 52 tgcgagtcgcaggtcatcgtgcagtacgtcgacgaggtctggcccg---ccggcgccccc 108
Query: 328 ctcctccccgccgacgcctacgaccgcgccatggctcgcttctgggcagcctacgtcgac 387
|||||||||||||| |||||| |||||||| || ||||||||||| ||||||||||||
Sbjct: 109 atcctccccgccgacccctacgcccgcgccaccgcccgcttctgggccgcctacgtcgac 168
Query: 388 gacaag 393
||||||
Sbjct: 169 gacaag 174
>gb|BQ467879.1|BQ467879 HR01D11r HR Hordeum vulgare subsp. vulgare cDNA clone HR01D11
5-PRIME, mRNA sequence
Length = 500
Score = 83.8 bits (42), Expect = 9e-015
Identities = 144/178 (80%)
Strand = Plus / Plus
Query: 216 caacccggtgcacaggaaggtgcccgtgctggtccacggcggccgccccgtgtgcgagtc 275
||||||||| |||| || ||| |||||||| |||||| |||| ||| | ||||||||
Sbjct: 221 caacccggtacacaagacggttcccgtgctcatccacgacggcaagcccatctgcgagtc 280
Query: 276 gctcgtcatcctgcagtacgtcgacgagacctgggcaggcaccgggacccctctcctccc 335
| ||||||||||||||| |||||||| ||| || ||| ||| | | ||||||||
Sbjct: 281 ccaggtcatcctgcagtacatcgacgaggccttcgccggcgtcggcccgtccctcctccc 340
Query: 336 cgccgacgcctacgaccgcgccatggctcgcttctgggcagcctacgtcgacgacaag 393
||||||| ||||||| |||||| | || ||||||||||| ||||||||||| ||||||
Sbjct: 341 cgccgacccctacgagcgcgccgtcgcgcgcttctgggccgcctacgtcgaagacaag 398
>gb|BQ767689.1|BQ767689 EBro08_SQ009_H13_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ009_H13 5', mRNA sequence
Length = 391
Score = 83.8 bits (42), Expect = 9e-015
Identities = 84/98 (85%)
Strand = Plus / Plus
Query: 478 gagacgctggagcaggcgttcagggagtgctccaaagggaaacccttcttcggcggcgac 537
||||||||||||| ||||||| ||||||||||||| ||||| |||||||||||| |||
Sbjct: 210 gagacgctggagcgggcgttcggggagtgctccaaggggaagggcttcttcggcggggac 269
Query: 538 gccgtcgggctcgtggacatcgcgctcgggagcttcgt 575
| || |||||||||||| ||| |||||| |||||||
Sbjct: 270 acggtggggctcgtggacgtcgtgctcggcggcttcgt 307
Score = 44.1 bits (22), Expect = 0.008
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 347 acgaccgcgccatggctcgcttctgggcagcctacgtcgacg 388
|||| |||||| | |||||||||||||| ||||||||||||
Sbjct: 79 acgagcgcgccgtcgctcgcttctgggcctcctacgtcgacg 120
Score = 38.2 bits (19), Expect = 0.50
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 281 tcatcctgcagtacgtcgacgag 303
||||| |||||||||||||||||
Sbjct: 13 tcatcgtgcagtacgtcgacgag 35
>gb|BF066033.2|BF066033 HV_CEb0014K12f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0014K12f, mRNA sequence
Length = 966
Score = 81.8 bits (41), Expect = 4e-014
Identities = 77/89 (86%)
Strand = Plus / Plus
Query: 478 gagacgctggagcaggcgttcagggagtgctccaaagggaaacccttcttcggcggcgac 537
||||||||||||| ||||||| ||||||||||||| ||||| |||||||||||| |||
Sbjct: 438 gagacgctggagcgggcgttcggggagtgctccaaggggaagggcttcttcggcggggac 497
Query: 538 gccgtcgggctcgtggacatcgcgctcgg 566
| || |||||||||||| ||| ||||||
Sbjct: 498 acggtggggctcgtggacgtcgtgctcgg 526
Score = 44.1 bits (22), Expect = 0.008
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 347 acgaccgcgccatggctcgcttctgggcagcctacgtcgacg 388
|||| |||||| | |||||||||||||| ||||||||||||
Sbjct: 307 acgagcgcgccgtcgctcgcttctgggcctcctacgtcgacg 348
Score = 38.2 bits (19), Expect = 0.50
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 281 tcatcctgcagtacgtcgacgag 303
||||| |||||||||||||||||
Sbjct: 241 tcatcgtgcagtacgtcgacgag 263
>gb|AL503233.1|AL503233 AL503233 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW01D13T 5', mRNA sequence
Length = 683
Score = 79.8 bits (40), Expect = 1e-013
Identities = 144/178 (80%), Gaps = 3/178 (1%)
Strand = Plus / Plus
Query: 216 caacccggtgcacaggaaggtgcccgtgctggtccacggcggccgccccgtgtgcgagtc 275
|||||||||||||| ||||| |||||||| |||||| |||| | ||||| ||||||||
Sbjct: 241 caacccggtgcacaacaaggttcccgtgctcatccacgccggcaggcccgtctgcgagtc 300
Query: 276 gctcgtcatcctgcagtacgtcgacgagacctgggcaggcaccgggacccctctcctccc 335
||| | |||| | |||||||| ||||| |||||| | | || || | ||||||||
Sbjct: 301 gcttgccatcgtcgagtacgtcaacgaggtctgggccgacggcg---cctccctcctccc 357
Query: 336 cgccgacgcctacgaccgcgccatggctcgcttctgggcagcctacgtcgacgacaag 393
|||||| |||||| |||||| | || ||||||||||| ||||||||||||||||||
Sbjct: 358 tgccgacccctacggccgcgctgtcgcccgcttctgggccgcctacgtcgacgacaag 415
>gb|AL504140.1|AL504140 AL504140 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW04F05V 5', mRNA sequence
Length = 700
Score = 79.8 bits (40), Expect = 1e-013
Identities = 144/178 (80%), Gaps = 3/178 (1%)
Strand = Plus / Plus
Query: 216 caacccggtgcacaggaaggtgcccgtgctggtccacggcggccgccccgtgtgcgagtc 275
|||||||||||||| ||||| |||||||| |||||| |||| | ||||| ||||||||
Sbjct: 225 caacccggtgcacaacaaggttcccgtgctcatccacgccggcaggcccgtctgcgagtc 284
Query: 276 gctcgtcatcctgcagtacgtcgacgagacctgggcaggcaccgggacccctctcctccc 335
||| | |||| | |||||||| ||||| |||||| | | || || | ||||||||
Sbjct: 285 gcttgccatcgtcgagtacgtcaacgaggtctgggccgacggcg---cctccctcctccc 341
Query: 336 cgccgacgcctacgaccgcgccatggctcgcttctgggcagcctacgtcgacgacaag 393
|||||| |||||| |||||| | || ||||||||||| ||||||||||||||||||
Sbjct: 342 tgccgacccctacggccgcgctgtcgcccgcttctgggccgcctacgtcgacgacaag 399
>gb|BF621473.2|BF621473 HVSMEa0011B16f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0011B16f, mRNA sequence
Length = 848
Score = 79.8 bits (40), Expect = 1e-013
Identities = 64/72 (88%)
Strand = Plus / Plus
Query: 232 aaggtgcccgtgctggtccacggcggccgccccgtgtgcgagtcgctcgtcatcctgcag 291
||||| ||||||||| ||||||||||| ||||| ||||||||||| ||||||||||||
Sbjct: 242 aaggtccccgtgctgatccacggcggcaagcccgtctgcgagtcgctggtcatcctgcag 301
Query: 292 tacgtcgacgag 303
||| ||||||||
Sbjct: 302 tacatcgacgag 313
>gb|BI949438.1|BI949438 HVSMEl0013O11f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0013O11f, mRNA sequence
Length = 922
Score = 79.8 bits (40), Expect = 1e-013
Identities = 144/178 (80%), Gaps = 3/178 (1%)
Strand = Plus / Plus
Query: 216 caacccggtgcacaggaaggtgcccgtgctggtccacggcggccgccccgtgtgcgagtc 275
|||||||||||||| ||||| |||||||| |||||| |||| | ||||| ||||||||
Sbjct: 230 caacccggtgcacaacaaggtccccgtgctcatccacgccggcaggcccgtctgcgagtc 289
Query: 276 gctcgtcatcctgcagtacgtcgacgagacctgggcaggcaccgggacccctctcctccc 335
||| | |||| | |||||||| ||||| |||||| | | || || | ||||||||
Sbjct: 290 gcttgccatcgtcgagtacgtcaacgaggtctgggccgacggcg---cctccctcctccc 346
Query: 336 cgccgacgcctacgaccgcgccatggctcgcttctgggcagcctacgtcgacgacaag 393
|||||| |||||| |||||| | || ||||||||||| ||||||||||||||||||
Sbjct: 347 tgccgacccctacggccgcgctgtcgcccgcttctgggccgcctacgtcgacgacaag 404
>gb|BI960661.1|BI960661 HVSMEn0025K13f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0025K13f, mRNA sequence
Length = 613
Score = 79.8 bits (40), Expect = 1e-013
Identities = 64/72 (88%)
Strand = Plus / Plus
Query: 232 aaggtgcccgtgctggtccacggcggccgccccgtgtgcgagtcgctcgtcatcctgcag 291
||||| ||||||||| ||||||||||| ||||| ||||||||||| ||||||||||||
Sbjct: 235 aaggtccccgtgctgatccacggcggcaagcccgtctgcgagtcgctggtcatcctgcag 294
Query: 292 tacgtcgacgag 303
||| ||||||||
Sbjct: 295 tacatcgacgag 306
>gb|BQ471258.1|BQ471258 HV01N17T HV Hordeum vulgare subsp. vulgare cDNA clone HV01N17
5-PRIME, mRNA sequence
Length = 552
Score = 79.8 bits (40), Expect = 1e-013
Identities = 144/178 (80%), Gaps = 3/178 (1%)
Strand = Plus / Plus
Query: 216 caacccggtgcacaggaaggtgcccgtgctggtccacggcggccgccccgtgtgcgagtc 275
|||||||||||||| ||||| |||||||| |||||| |||| | ||||| ||||||||
Sbjct: 247 caacccggtgcacaacaaggttcccgtgctcatccacgccggcaggcccgtctgcgagtc 306
Query: 276 gctcgtcatcctgcagtacgtcgacgagacctgggcaggcaccgggacccctctcctccc 335
||| | |||| | |||||||| ||||| |||||| | | || || | ||||||||
Sbjct: 307 gcttgccatcgtcgagtacgtcaacgaggtctgggccgacggcg---cctccctcctccc 363
Query: 336 cgccgacgcctacgaccgcgccatggctcgcttctgggcagcctacgtcgacgacaag 393
|||||| |||||| |||||| | || ||||||||||| ||||||||||||||||||
Sbjct: 364 tgccgacccctacggccgcgctgtcgcccgcttctgggccgcctacgtcgacgacaag 421
>gb|BE214393.3|BE214393 HV_CEb0003F04f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0003F04f, mRNA sequence
Length = 575
Score = 75.8 bits (38), Expect = 2e-012
Identities = 143/178 (80%)
Strand = Plus / Minus
Query: 216 caacccggtgcacaggaaggtgcccgtgctggtccacggcggccgccccgtgtgcgagtc 275
||||||||||||| || ||||| || || |||||||||||||||||||| ||||||
Sbjct: 392 caacccggtgcaccagagcgtgccggtcctcctccacggcggccgccccgtgaacgagtc 333
Query: 276 gctcgtcatcctgcagtacgtcgacgagacctgggcaggcaccgggacccctctcctccc 335
| |||||| |||||||| |||||||| |||||| || ||| | | | |||||
Sbjct: 332 ccaggtcatcgtgcagtacatcgacgaggtctgggcgggggtcggcccgtcggtgctccc 273
Query: 336 cgccgacgcctacgaccgcgccatggctcgcttctgggcagcctacgtcgacgacaag 393
|||||| ||||||| |||||| |||| ||||||||||| || |||||||||||||||
Sbjct: 272 ggccgacccctacgagcgcgccgtggcgcgcttctgggcggcgtacgtcgacgacaag 215
Score = 52.0 bits (26), Expect = 3e-005
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 501 ggagtgctccaaagggaaacccttcttcggcggcgacgccgtcgggctcgtggacatcgc 560
|||||||||| ||||| || |||||||||||||||||| ||||| |||| ||| |||
Sbjct: 104 ggagtgctccggggggaagccgttcttcggcggcgacgccatcgggttcgtcgacgtcgt 45
Query: 561 gctcgg 566
||||||
Sbjct: 44 gctcgg 39
>gb|BM817225.1|BM817225 HC109B04_T3.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC109B04_T3.ab1 similar to Glutathione
transferase,Glycoprotein-fucosylgalactoside
alpha-galactosyltransferase,, mRNA sequence
Length = 897
Score = 75.8 bits (38), Expect = 2e-012
Identities = 143/178 (80%)
Strand = Plus / Plus
Query: 216 caacccggtgcacaggaaggtgcccgtgctggtccacggcggccgccccgtgtgcgagtc 275
||||||||| |||| || ||| |||||||| |||||| |||| ||| | ||||||||
Sbjct: 244 caacccggtacacaagacggttcccgtgctcatccacgacggcaagcccatctgcgagtc 303
Query: 276 gctcgtcatcctgcagtacgtcgacgagacctgggcaggcaccgggacccctctcctccc 335
| ||||||||||||||| |||||||| ||| || ||| ||| | | ||||||||
Sbjct: 304 ccaggtcatcctgcagtacatcgacgaggccttcgccggcgtcggcccgtccctcctccc 363
Query: 336 cgccgacgcctacgaccgcgccatggctcgcttctgggcagcctacgtcgacgacaag 393
|||||| ||||||| |||||| | || ||||||||||| ||||||||||| ||||||
Sbjct: 364 cgccgatccctacgagcgcgccgtcgcgcgcttctgggccgcctacgtcgaagacaag 421
>gb|BI947723.1|BI947723 HVSMEl0006J20f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0006J20f, mRNA sequence
Length = 869
Score = 71.9 bits (36), Expect = 4e-011
Identities = 143/178 (80%), Gaps = 3/178 (1%)
Strand = Plus / Plus
Query: 216 caacccggtgcacaggaaggtgcccgtgctggtccacggcggccgccccgtgtgcgagtc 275
|||||||||||||| ||||| |||||||| |||||| |||| | ||||| ||||||||
Sbjct: 234 caacccggtgcacaacaaggtccccgtgctcatccacgccggcaggcccgtctgcgagtc 293
Query: 276 gctcgtcatcctgcagtacgtcgacgagacctgggcaggcaccgggacccctctcctccc 335
||| | |||| | |||||||| ||||| |||||| | | || || | ||||||||
Sbjct: 294 gcttgccatcgtcgagtacgtcaacgaggtctgggccgacggcg---cctccctcctccc 350
Query: 336 cgccgacgcctacgaccgcgccatggctcgcttctgggcagcctacgtcgacgacaag 393
|||||| |||||| |||||| | || ||||||||||| | ||||||||||||||||
Sbjct: 351 tgccgacccctacggccgcgctgtcgcccgcttctgggccggctacgtcgacgacaag 408
>gb|BF065184.1|BF065184 HV_CEb0023O18f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0023O18f, mRNA sequence
Length = 577
Score = 71.9 bits (36), Expect = 4e-011
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 232 aaggtgcccgtgctggtccacggcggccgccccgtgtgcgagtcgctcgtcatcctgcag 291
||||| ||||||||| ||||||||||| ||||| ||||||||||| |||||||||||
Sbjct: 253 aaggtccccgtgctgatccacggcggcaagcccgtctgcgagtcgctggtcatcctgcaa 312
Query: 292 tacgtcgacgag 303
||| ||||||||
Sbjct: 313 tacatcgacgag 324
>gb|BF261927.2|BF261927 HV_CEa0002J15f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0002J15f, mRNA sequence
Length = 825
Score = 71.9 bits (36), Expect = 4e-011
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 216 caacccggtgcacaggaaggtgcccgtgctggtccacggcggccgccccgtgtgcgagtc 275
|||||| || |||| ||||||||||||||| |||||| ||||||| |||| ||||||||
Sbjct: 195 caaccccgtccacaagaaggtgcccgtgctcctccacgacggccgcgccgtctgcgagtc 254
Query: 276 gctcgtcatcct 287
|||||||||||
Sbjct: 255 cctcgtcatcct 266
>gb|BF623987.2|BF623987 HVSMEa0008F14f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0008F14f, mRNA sequence
Length = 507
Score = 69.9 bits (35), Expect = 1e-010
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 328 ctcctccccgccgacgcctacgaccgcgccatggctcgcttctgggcagcctacgtcgac 387
||||||||||||||| || ||||||||||| | || ||||||||||| ||||||| ||||
Sbjct: 332 ctcctccccgccgacccccacgaccgcgccgtcgcccgcttctgggccgcctacgccgac 391
Query: 388 gac 390
|||
Sbjct: 392 gac 394
Score = 54.0 bits (27), Expect = 8e-006
Identities = 114/143 (79%)
Strand = Plus / Plus
Query: 161 gctacgagttcgtcgaggaggacctctcccgcaagagcgacctgctgctgaagctcaacc 220
||||||||| || ||||||||||||| || ||||||||||||| || || |||||
Sbjct: 159 gctacgagtacgccgaggaggacctcaccagcaagagcgacctcctcctcgcctccaacc 218
Query: 221 cggtgcacaggaaggtgcccgtgctggtccacggcggccgccccgtgtgcgagtcgctcg 280
| |||||| ||||| |||||||| ||||||||||| ||||| |||||||| |
Sbjct: 219 ccgtgcacgccaaggtccccgtgctcctccacggcggcaagcccgtctgcgagtccatgc 278
Query: 281 tcatcctgcagtacgtcgacgag 303
||||| |||||||| ||||||||
Sbjct: 279 tcatcgtgcagtacctcgacgag 301
>gb|BI954235.1|BI954235 HVSMEm0016M03f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0016M03f, mRNA sequence
Length = 682
Score = 69.9 bits (35), Expect = 1e-010
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 328 ctcctccccgccgacgcctacgaccgcgccatggctcgcttctgggcagcctacgtcgac 387
||||||||||||||| || ||||||||||| | || ||||||||||| ||||||| ||||
Sbjct: 289 ctcctccccgccgacccccacgaccgcgccgtcgcccgcttctgggccgcctacgccgac 348
Query: 388 gac 390
|||
Sbjct: 349 gac 351
Score = 54.0 bits (27), Expect = 8e-006
Identities = 114/143 (79%)
Strand = Plus / Plus
Query: 161 gctacgagttcgtcgaggaggacctctcccgcaagagcgacctgctgctgaagctcaacc 220
||||||||| || ||||||||||||| || ||||||||||||| || || |||||
Sbjct: 116 gctacgagtacgccgaggaggacctcaccagcaagagcgacctcctcctcgcctccaacc 175
Query: 221 cggtgcacaggaaggtgcccgtgctggtccacggcggccgccccgtgtgcgagtcgctcg 280
| |||||| ||||| |||||||| ||||||||||| ||||| |||||||| |
Sbjct: 176 ccgtgcacgccaaggtccccgtgctcctccacggcggcaagcccgtctgcgagtccatgc 235
Query: 281 tcatcctgcagtacgtcgacgag 303
||||| |||||||| ||||||||
Sbjct: 236 tcatcgtgcagtacctcgacgag 258
>gb|BF267688.2|BF267688 HV_CEa0018J20f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0018J20f, mRNA sequence
Length = 799
Score = 69.9 bits (35), Expect = 1e-010
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 331 ctccccgccgacgcctacgaccgcgccatggctcgcttctgggcagcctacgtcgacgac 390
||||| |||||| ||||||| |||||| |||| ||||||||||| || ||||||||||||
Sbjct: 7 ctcccggccgacccctacgagcgcgccgtggcgcgcttctgggcggcgtacgtcgacgac 66
Query: 391 aag 393
|||
Sbjct: 67 aag 69
Score = 52.0 bits (26), Expect = 3e-005
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 501 ggagtgctccaaagggaaacccttcttcggcggcgacgccgtcgggctcgtggacatcgc 560
|||||||||| ||||| || |||||||||||||||||| ||||| |||| ||| |||
Sbjct: 180 ggagtgctccggggggaagccgttcttcggcggcgacgccatcgggttcgtcgacgtcgt 239
Query: 561 gctcgg 566
||||||
Sbjct: 240 gctcgg 245
>gb|CA025935.1|CA025935 HZ53J07r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ53J07
5-PRIME, mRNA sequence
Length = 473
Score = 69.9 bits (35), Expect = 1e-010
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 328 ctcctccccgccgacgcctacgaccgcgccatggctcgcttctgggcagcctacgtcgac 387
||||||||||||||| || ||||||||||| | || ||||||||||| ||||||| ||||
Sbjct: 120 ctcctccccgccgacccccacgaccgcgccgtcgcccgcttctgggccgcctacgccgac 179
Query: 388 gac 390
|||
Sbjct: 180 gac 182
Score = 54.0 bits (27), Expect = 8e-006
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 493 gcgttcagggagtgctccaaagggaaacccttcttcggcggcgacgccgtcgggctcgtg 552
|||||| | ||||||||||| || || |||||||||||||||||||| ||| ||||
Sbjct: 285 gcgttcggcgagtgctccaagggcaaggccttcttcggcggcgacgccccggggtacgtg 344
Query: 553 gacatcgcgct 563
|||||||||||
Sbjct: 345 gacatcgcgct 355
Score = 40.1 bits (20), Expect = 0.13
Identities = 59/72 (81%)
Strand = Plus / Plus
Query: 232 aaggtgcccgtgctggtccacggcggccgccccgtgtgcgagtcgctcgtcatcctgcag 291
||||| |||||||| ||||||||||| ||||| |||||||| | ||||| |||||
Sbjct: 18 aaggtccccgtgctcctccacggcggcaagcccgtctgcgagtccatgctcatcgtgcag 77
Query: 292 tacgtcgacgag 303
||| ||||||||
Sbjct: 78 tacctcgacgag 89
>gb|BF624808.3|BF624808 HVSMEa0017M20f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0017M20f, mRNA sequence
Length = 847
Score = 67.9 bits (34), Expect = 6e-010
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 230 ggaaggtgcccgtgctggtccacggcggccgccccgtgtgcgagtcgctcgtcatcctgc 289
|||||||||||||||| |||||||||||||| |||| |||||| || |||||| ||
Sbjct: 230 ggaaggtgcccgtgctcatccacggcggccgcgccgtcgccgagtctctggtcatcgtgg 289
Query: 290 agtacgtcgacgag 303
||||||||||||||
Sbjct: 290 agtacgtcgacgag 303
>gb|BF257083.2|BF257083 HVSMEf0011M23f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0011M23f, mRNA sequence
Length = 585
Score = 67.9 bits (34), Expect = 6e-010
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 230 ggaaggtgcccgtgctggtccacggcggccgccccgtgtgcgagtcgctcgtcatcctgc 289
|||||||||||||||| |||||||||||||| |||| |||||| || |||||| ||
Sbjct: 241 ggaaggtgcccgtgctcatccacggcggccgcgccgtcgccgagtctctggtcatcgtgg 300
Query: 290 agtacgtcgacgag 303
||||||||||||||
Sbjct: 301 agtacgtcgacgag 314
>gb|BQ664112.1|BQ664112 HV01N17w HV Hordeum vulgare subsp. vulgare cDNA clone HV01N17
3-PRIME, mRNA sequence
Length = 601
Score = 67.9 bits (34), Expect = 6e-010
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 328 ctcctccccgccgacgcctacgaccgcgccatggctcgcttctgggcagcctacgtcgac 387
|||||||| |||||| |||||| |||||| | || ||||||||||| ||||||||||||
Sbjct: 593 ctcctccctgccgacccctacggccgcgctgtcgcccgcttctgggccgcctacgtcgac 534
Query: 388 gacaag 393
||||||
Sbjct: 533 gacaag 528
>gb|AL450842.1|AL450842 AL450842 Hordeum vulgare Barke etiolated leaves Hordeum vulgare
subsp. vulgare cDNA clone HK04H17u 5', mRNA sequence
Length = 700
Score = 65.9 bits (33), Expect = 2e-009
Identities = 93/113 (82%)
Strand = Plus / Plus
Query: 191 gcaagagcgacctgctgctgaagctcaacccggtgcacaggaaggtgcccgtgctggtcc 250
|||||||||||||||||||||||| |||||| | ||| |||||||| ||||| ||||
Sbjct: 139 gcaagagcgacctgctgctgaagcacaaccccatccaccaaaaggtgcctgtgctcgtcc 198
Query: 251 acggcggccgccccgtgtgcgagtcgctcgtcatcctgcagtacgtcgacgag 303
| || | ||| || | |||||||| ||| ||||| || ||||||||||||||
Sbjct: 199 atggtgaccgggccatctgcgagtccctcctcatcatggagtacgtcgacgag 251
>gb|BU998635.1|BU998635 HI11L03r HI Hordeum vulgare subsp. vulgare cDNA clone HI11L03
5-PRIME, mRNA sequence
Length = 641
Score = 65.9 bits (33), Expect = 2e-009
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 328 ctcctccccgccgacgcctacgaccgcgccatggctcgcttctgg 372
||||||||||||||||||| |||||||||| | ||||||||||||
Sbjct: 363 ctcctccccgccgacgccttcgaccgcgccgtcgctcgcttctgg 407
>gb|BF622486.2|BF622486 HVSMEa0004I15f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0004I15f, mRNA sequence
Length = 475
Score = 63.9 bits (32), Expect = 9e-009
Identities = 142/178 (79%), Gaps = 3/178 (1%)
Strand = Plus / Plus
Query: 216 caacccggtgcacaggaaggtgcccgtgctggtccacggcggccgccccgtgtgcgagtc 275
|||||||||||||| ||||| |||||||| |||||| |||| | ||||| ||||||||
Sbjct: 242 caacccggtgcacaacaaggtccccgtgctcatccacgccggcaggcccgtctgcgagtc 301
Query: 276 gctcgtcatcctgcagtacgtcgacgagacctgggcaggcaccgggacccctctcctccc 335
||| | |||| | |||||||| ||||| |||||| | ||| || | |||||||
Sbjct: 302 gcttgccatcgtcgagtacgtcaacgaggtctgggc---cgacggcgcctccctcctccg 358
Query: 336 cgccgacgcctacgaccgcgccatggctcgcttctgggcagcctacgtcgacgacaag 393
|||||| | |||| |||||| | || ||||||||||| ||||||||||||||||||
Sbjct: 359 tgccgacccttacggccgcgctgtcgcccgcttctgggccgcctacgtcgacgacaag 416
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 162,743
Number of Sequences: 312970
Number of extensions: 162743
Number of successful extensions: 52838
Number of sequences better than 0.5: 233
Number of HSP's better than 0.5 without gapping: 232
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 52169
Number of HSP's gapped (non-prelim): 644
length of query: 917
length of database: 175,134,539
effective HSP length: 19
effective length of query: 898
effective length of database: 169,188,109
effective search space: 151930921882
effective search space used: 151930921882
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)