BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1738978.2.1
(572 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AL450781.1|AL450781 AL450781 Hordeum vulgare Barke etiol... 78 4e-013
gb|AL499944.1|AL499944 AL499944 Hordeum vulgare Barke etiol... 78 4e-013
gb|BF622970.2|BF622970 HVSMEa0012G06f Hordeum vulgare seedl... 78 4e-013
gb|BF627122.2|BF627122 HVSMEb0004A04f Hordeum vulgare seedl... 78 4e-013
gb|BG414351.1|BG414351 HVSMEk0001K20f Hordeum vulgare testa... 78 4e-013
gb|BF628536.3|BF628536 HVSMEb0006H11f Hordeum vulgare seedl... 78 4e-013
gb|AW982444.3|AW982444 HVSMEg0003F03f Hordeum vulgare pre-a... 78 4e-013
gb|BF265772.3|BF265772 HV_CEa0013E19f Hordeum vulgare seedl... 78 4e-013
gb|BE214724.3|BE214724 HV_CEb0004F20f Hordeum vulgare seedl... 78 4e-013
gb|BQ661744.1|BQ661744 HP01B19w HP Hordeum vulgare subsp. v... 78 4e-013
gb|BI777935.2|BI777935 EBro07_SQ001_G06_R root, 3 week, red... 78 4e-013
gb|CA022845.1|CA022845 HZ44I09r HZ Hordeum vulgare subsp. v... 78 4e-013
gb|CA029642.1|CA029642 HZ65M18r HZ Hordeum vulgare subsp. v... 78 4e-013
gb|CB877870.1|CB877870 HP06H16T HP Hordeum vulgare subsp. v... 78 4e-013
gb|CB878360.1|CB878360 HP08E08T HP Hordeum vulgare subsp. v... 78 4e-013
gb|CD662289.1|CD662289 UCRHV18_01aa11_b1 Drought-stressed D... 78 4e-013
gb|BI954274.1|BI954274 HVSMEm0016P04f Hordeum vulgare green... 72 2e-011
gb|BF624508.1|BF624508 HVSMEa0016P10f Hordeum vulgare seedl... 70 9e-011
gb|BF628745.2|BF628745 HVSMEb0007M01f Hordeum vulgare seedl... 70 9e-011
emb|X57270.1|HVLTPMR H.vulgare mRNA for putative phospholip... 64 5e-009
emb|X69793.1|HVLTP2A H.vulgare ltp2 gene for lipid transfer... 64 5e-009
gb|BI947161.1|BI947161 HVSMEl0003P16f Hordeum vulgare spike... 62 2e-008
gb|BF264965.2|BF264965 HV_CEa0010O03f Hordeum vulgare seedl... 62 2e-008
gb|AF039024.1|AF039024 Hordeum vulgare 7 kDa lipid transfer... 58 3e-007
gb|AL506145.1|AL506145 AL506145 Hordeum vulgare Barke devel... 56 1e-006
gb|AL509557.1|AL509557 AL509557 Hordeum vulgare Barke devel... 56 1e-006
gb|BE195893.2|BE195893 HVSMEh0090M08f Hordeum vulgare 5-45 ... 56 1e-006
gb|BG414424.1|BG414424 HVSMEk0002H09f Hordeum vulgare testa... 56 1e-006
gb|BG417843.1|BG417843 HVSMEk0019L08f Hordeum vulgare testa... 56 1e-006
gb|BE193986.3|BE193986 HVSMEh0083D03f Hordeum vulgare 5-45 ... 56 1e-006
gb|BE454408.3|BE454408 HVSMEh0094F18f Hordeum vulgare 5-45 ... 56 1e-006
gb|BE454454.3|BE454454 HVSMEh0094H20f Hordeum vulgare 5-45 ... 56 1e-006
gb|BE602382.3|BE602382 HVSMEh0098L08f Hordeum vulgare 5-45 ... 56 1e-006
gb|BG416600.2|BG416600 HVSMEk0013G16f Hordeum vulgare testa... 56 1e-006
gb|BG416940.2|BG416940 HVSMEk0015E14f Hordeum vulgare testa... 56 1e-006
gb|BQ464245.1|BQ464245 HF01L21T HF Hordeum vulgare subsp. v... 56 1e-006
gb|BQ464277.1|BQ464277 HF01N05T HF Hordeum vulgare subsp. v... 56 1e-006
gb|BQ472815.1|BQ472815 HB01G10r BC Hordeum vulgare subsp. v... 56 1e-006
gb|BQ659795.1|BQ659795 HF01L21w HF Hordeum vulgare subsp. v... 56 1e-006
gb|BQ659823.1|BQ659823 HF01N05w HF Hordeum vulgare subsp. v... 56 1e-006
gb|BM441756.2|BM441756 EBed07_SQ001_H13_R endosperm, 28 DPA... 56 1e-006
gb|BI780129.2|BI780129 EBma08_SQ001_H20_R maternal, 28 DPA,... 56 1e-006
gb|BI780155.2|BI780155 EBma08_SQ001_I24_R maternal, 28 DPA,... 56 1e-006
gb|BI780209.2|BI780209 EBma08_SQ001_L12_R maternal, 28 DPA,... 56 1e-006
gb|BM371301.2|BM371301 EBma08_SQ002_D06_R maternal, 28 DPA,... 56 1e-006
gb|BM371785.2|BM371785 EBma08_SQ003_P11_R maternal, 28 DPA,... 56 1e-006
gb|BM372068.2|BM372068 EBma08_SQ004_N22_R maternal, 28 DPA,... 56 1e-006
gb|BQ754579.1|BQ754579 EBed01_SQ003_D11_R endosperm, 6 DPA,... 56 1e-006
gb|BQ755302.1|BQ755302 EBed07_SQ002_A12_R endosperm, 28 DPA... 56 1e-006
gb|BQ755587.1|BQ755587 EBed07_SQ003_E01_R endosperm, 28 DPA... 56 1e-006
gb|BQ758525.1|BQ758525 EBma07_SQ002_C04_R maternal, 21 DPA,... 56 1e-006
gb|BQ758528.1|BQ758528 EBma07_SQ002_D02_R maternal, 21 DPA,... 56 1e-006
gb|BQ758649.1|BQ758649 EBma07_SQ002_K12_R maternal, 21 DPA,... 56 1e-006
gb|BQ758719.1|BQ758719 EBma07_SQ002_I16_R maternal, 21 DPA,... 56 1e-006
gb|BQ758811.1|BQ758811 EBma07_SQ002_K23_R maternal, 21 DPA,... 56 1e-006
gb|BQ759090.1|BQ759090 EBma07_SQ003_B23_R maternal, 21 DPA,... 56 1e-006
gb|BQ760213.1|BQ760213 EBpi07_SQ003_E14_R pistil, 12 DPA, n... 56 1e-006
gb|BU968759.1|BU968759 HB08H23r BC Hordeum vulgare subsp. v... 56 1e-006
gb|BU968885.1|BU968885 HB08O05r BC Hordeum vulgare subsp. v... 56 1e-006
gb|BU969180.1|BU969180 HB10M14r BC Hordeum vulgare subsp. v... 56 1e-006
gb|BU970195.1|BU970195 HB13O13r BC Hordeum vulgare subsp. v... 56 1e-006
gb|BU970274.1|BU970274 HB14C16r BC Hordeum vulgare subsp. v... 56 1e-006
gb|BU970403.1|BU970403 HB14I15r BC Hordeum vulgare subsp. v... 56 1e-006
gb|BU970745.1|BU970745 HB15J01r BC Hordeum vulgare subsp. v... 56 1e-006
gb|BU971154.1|BU971154 HB16M08r BC Hordeum vulgare subsp. v... 56 1e-006
gb|BU972407.1|BU972407 HB21I23r BC Hordeum vulgare subsp. v... 56 1e-006
gb|BU972897.1|BU972897 HB23B14r BC Hordeum vulgare subsp. v... 56 1e-006
gb|BU973772.1|BU973772 HB25O18r BC Hordeum vulgare subsp. v... 56 1e-006
gb|BU974427.1|BU974427 HB27O08r BC Hordeum vulgare subsp. v... 56 1e-006
gb|BU974704.1|BU974704 HB28N07r BC Hordeum vulgare subsp. v... 56 1e-006
gb|BU975739.1|BU975739 HB32C14r BC Hordeum vulgare subsp. v... 56 1e-006
gb|BU981560.1|BU981560 HA23P19r HA Hordeum vulgare subsp. v... 56 1e-006
gb|BU981701.1|BU981701 HA24G05r HA Hordeum vulgare subsp. v... 56 1e-006
gb|BU985555.1|BU985555 HF07P02r HF Hordeum vulgare subsp. v... 56 1e-006
gb|BU987412.1|BU987412 HF14L01r HF Hordeum vulgare subsp. v... 56 1e-006
gb|BU988649.1|BU988649 HF18E17r HF Hordeum vulgare subsp. v... 56 1e-006
gb|CA011719.1|CA011719 HT03F19r HT Hordeum vulgare subsp. v... 56 1e-006
gb|CA012019.1|CA012019 HT04D07r HT Hordeum vulgare subsp. v... 56 1e-006
gb|CV055108.1|CV055108 BNEL116h7 Barley EST endosperm libra... 56 1e-006
gb|CV061074.1|CV061074 BNEL64f6 Barley EST endosperm librar... 56 1e-006
gb|CV061878.1|CV061878 BNEL73h6 Barley EST endosperm librar... 56 1e-006
gb|BF624218.2|BF624218 HVSMEa0012N08f Hordeum vulgare seedl... 54 5e-006
gb|BF629784.2|BF629784 HVSMEb0013M22f Hordeum vulgare seedl... 54 5e-006
gb|BG416942.1|BG416942 HVSMEk0015E16f Hordeum vulgare testa... 54 5e-006
gb|AL507929.1|AL507929 AL507929 Hordeum vulgare Barke devel... 50 8e-005
gb|AL511188.1|AL511188 AL511188 Hordeum vulgare Barke devel... 50 8e-005
gb|BF627838.2|BF627838 HVSMEb0005P01f Hordeum vulgare seedl... 50 8e-005
gb|BI947944.1|BI947944 HVSMEl0007I20f Hordeum vulgare spike... 50 8e-005
gb|BF618832.3|BF618832 HVSMEc0008B07f Hordeum vulgare seedl... 50 8e-005
gb|AW982276.3|AW982276 HVSMEg0002K09f Hordeum vulgare pre-a... 50 8e-005
gb|BG343773.2|BG343773 HVSMEg0006L11f Hordeum vulgare pre-a... 50 8e-005
gb|BE454205.3|BE454205 HVSMEh0093E02f Hordeum vulgare 5-45 ... 50 8e-005
gb|BG416707.2|BG416707 HVSMEk0014D05f Hordeum vulgare testa... 50 8e-005
gb|BM099677.1|BM099677 EBes01_SQ003_O18_R embryo sac, 4-6 D... 50 8e-005
gb|BM374649.1|BM374649 EBma05_SQ002_E24_R maternal, 12 DPA,... 50 8e-005
gb|BM374724.1|BM374724 EBma05_SQ002_J21_R maternal, 12 DPA,... 50 8e-005
gb|BQ458385.1|BQ458385 HA05F24r HA Hordeum vulgare subsp. v... 50 8e-005
gb|BQ458462.1|BQ458462 HA05C05r HA Hordeum vulgare subsp. v... 50 8e-005
gb|BQ458656.1|BQ458656 HA04J16r HA Hordeum vulgare subsp. v... 50 8e-005
gb|BQ458880.1|BQ458880 HA02P03r HA Hordeum vulgare subsp. v... 50 8e-005
gb|BQ459003.1|BQ459003 HA02J16r HA Hordeum vulgare subsp. v... 50 8e-005
gb|BQ459066.1|BQ459066 HA02G21r HA Hordeum vulgare subsp. v... 50 8e-005
gb|BQ459232.1|BQ459232 HA01O03r HA Hordeum vulgare subsp. v... 50 8e-005
gb|BQ459363.1|BQ459363 HA01F13r HA Hordeum vulgare subsp. v... 50 8e-005
gb|BQ459456.1|BQ459456 HA01A08r HA Hordeum vulgare subsp. v... 50 8e-005
gb|BQ459952.1|BQ459952 HA07K06r HA Hordeum vulgare subsp. v... 50 8e-005
gb|BQ459971.1|BQ459971 HA07I23r HA Hordeum vulgare subsp. v... 50 8e-005
gb|BQ460003.1|BQ460003 HA07H18r HA Hordeum vulgare subsp. v... 50 8e-005
gb|BQ460349.1|BQ460349 HA09P05r HA Hordeum vulgare subsp. v... 50 8e-005
gb|BQ460646.1|BQ460646 HA06F13r HA Hordeum vulgare subsp. v... 50 8e-005
gb|BQ460662.1|BQ460662 HA06E18r HA Hordeum vulgare subsp. v... 50 8e-005
gb|BQ460700.1|BQ460700 HA06D02r HA Hordeum vulgare subsp. v... 50 8e-005
gb|BQ460852.1|BQ460852 HA05L08r HA Hordeum vulgare subsp. v... 50 8e-005
gb|BQ460865.1|BQ460865 HA05K17r HA Hordeum vulgare subsp. v... 50 8e-005
gb|BQ656408.1|BQ656408 HA04J16u HA Hordeum vulgare subsp. v... 50 8e-005
gb|BQ656584.1|BQ656584 HA02P03u HA Hordeum vulgare subsp. v... 50 8e-005
gb|BQ656723.1|BQ656723 HA02G21u HA Hordeum vulgare subsp. v... 50 8e-005
gb|BQ656842.1|BQ656842 HA01O03u HA Hordeum vulgare subsp. v... 50 8e-005
gb|BQ657486.1|BQ657486 HA08C20u HA Hordeum vulgare subsp. v... 50 8e-005
gb|BQ657987.1|BQ657987 HA06D02u HA Hordeum vulgare subsp. v... 50 8e-005
gb|BI780614.2|BI780614 EBes01_SQ001_H12_R embryo sac, 4-6 D... 50 8e-005
gb|BI780717.2|BI780717 EBes01_SQ001_O19_R embryo sac, 4-6 D... 50 8e-005
gb|BM099152.2|BM099152 EBes01_SQ002_G03_R embryo sac, 4-6 D... 50 8e-005
gb|BM099205.2|BM099205 EBes01_SQ002_I15_R embryo sac, 4-6 D... 50 8e-005
gb|BM099269.2|BM099269 EBes01_SQ002_L20_R embryo sac, 4-6 D... 50 8e-005
gb|BM099356.2|BM099356 EBes01_SQ003_A03_R embryo sac, 4-6 D... 50 8e-005
gb|BM099555.2|BM099555 EBes01_SQ003_J09_R embryo sac, 4-6 D... 50 8e-005
gb|BM099731.2|BM099731 EBes01_SQ004_B23_R embryo sac, 4-6 D... 50 8e-005
gb|BM099848.2|BM099848 EBes01_SQ004_H07_R embryo sac, 4-6 D... 50 8e-005
gb|BM099902.2|BM099902 EBes01_SQ004_J18_R embryo sac, 4-6 D... 50 8e-005
gb|BM099903.2|BM099903 EBes01_SQ004_J19_R embryo sac, 4-6 D... 50 8e-005
gb|BM099904.2|BM099904 EBes01_SQ004_J20_R embryo sac, 4-6 D... 50 8e-005
gb|BM099928.2|BM099928 EBes01_SQ004_K21_R embryo sac, 4-6 D... 50 8e-005
gb|BM100040.2|BM100040 EBes01_SQ004_P20_R embryo sac, 4-6 D... 50 8e-005
gb|BM100266.2|BM100266 EBma01_SQ001_L01_R maternal, 4 DPA, ... 50 8e-005
gb|BM100483.2|BM100483 EBma01_SQ005_F18_R maternal, 4 DPA, ... 50 8e-005
gb|BI780983.2|BI780983 EBma03_SQ001_A24_R maternal, 8 DPA, ... 50 8e-005
gb|BI781160.2|BI781160 EBma03_SQ001_J24_R maternal, 8 DPA, ... 50 8e-005
gb|BM100916.2|BM100916 EBpi01_SQ002_F20_R pistil, 1 DPA, no... 50 8e-005
gb|BI776946.2|BI776946 EBpi03_SQ001_H09_R pistil, 4 DPA, no... 50 8e-005
gb|BM098034.2|BM098034 EBpi03_SQ002_F20_R pistil, 4 DPA, no... 50 8e-005
gb|BM374485.2|BM374485 EBpi03_SQ003_M16_R pistil, 4 DPA, no... 50 8e-005
gb|BI776653.2|BI776653 EBpi07_SQ001_E14_R pistil, 12 DPA, n... 50 8e-005
gb|BM097038.2|BM097038 EBpi07_SQ002_D08_R pistil, 12 DPA, n... 50 8e-005
gb|BQ758440.1|BQ758440 EBma05_SQ003_J23_R maternal, 12 DPA,... 50 8e-005
gb|BQ759528.1|BQ759528 EBpi01_SQ004_E20_R pistil, 1 DPA, no... 50 8e-005
gb|BU970422.1|BU970422 HB14J15r BC Hordeum vulgare subsp. v... 50 8e-005
gb|BU976313.1|BU976313 HA03I02r HA Hordeum vulgare subsp. v... 50 8e-005
gb|BU976314.1|BU976314 HA03I02u HA Hordeum vulgare subsp. v... 50 8e-005
gb|BU976335.1|BU976335 HA03I15r HA Hordeum vulgare subsp. v... 50 8e-005
gb|BU976336.1|BU976336 HA03I15u HA Hordeum vulgare subsp. v... 50 8e-005
gb|BU976415.1|BU976415 HA03K19r HA Hordeum vulgare subsp. v... 50 8e-005
gb|BU976623.1|BU976623 HA10A03r HA Hordeum vulgare subsp. v... 50 8e-005
gb|BU976624.1|BU976624 HA10A03u HA Hordeum vulgare subsp. v... 50 8e-005
gb|BU976738.1|BU976738 HA10D13r HA Hordeum vulgare subsp. v... 50 8e-005
gb|BU976739.1|BU976739 HA10D13u HA Hordeum vulgare subsp. v... 50 8e-005
gb|BU977179.1|BU977179 HA10P14u HA Hordeum vulgare subsp. v... 50 8e-005
gb|BU977190.1|BU977190 HA10P20u HA Hordeum vulgare subsp. v... 50 8e-005
gb|BU978175.1|BU978175 HA12L06r HA Hordeum vulgare subsp. v... 50 8e-005
gb|BU978229.1|BU978229 HA12M18r HA Hordeum vulgare subsp. v... 50 8e-005
gb|BU978230.1|BU978230 HA12M18u HA Hordeum vulgare subsp. v... 50 8e-005
gb|BU979005.1|BU979005 HA14O06r HA Hordeum vulgare subsp. v... 50 8e-005
gb|BU979217.1|BU979217 HA15H19r HA Hordeum vulgare subsp. v... 50 8e-005
gb|BU979309.1|BU979309 HA15M01r HA Hordeum vulgare subsp. v... 50 8e-005
gb|BU979382.1|BU979382 HA15P16r HA Hordeum vulgare subsp. v... 50 8e-005
gb|BU979431.1|BU979431 HA16C09r HA Hordeum vulgare subsp. v... 50 8e-005
gb|BU979451.1|BU979451 HA16D08r HA Hordeum vulgare subsp. v... 50 8e-005
gb|BU979601.1|BU979601 HA16K23r HA Hordeum vulgare subsp. v... 50 8e-005
gb|BU979737.1|BU979737 HA17C01r HA Hordeum vulgare subsp. v... 50 8e-005
gb|BU979862.1|BU979862 HA17J15r HA Hordeum vulgare subsp. v... 50 8e-005
gb|BU980010.1|BU980010 HA18D08r HA Hordeum vulgare subsp. v... 50 8e-005
gb|BU980233.1|BU980233 HA20B05r HA Hordeum vulgare subsp. v... 50 8e-005
gb|BU980374.1|BU980374 HA20H04r HA Hordeum vulgare subsp. v... 50 8e-005
gb|BU980690.1|BU980690 HA21G12r HA Hordeum vulgare subsp. v... 50 8e-005
gb|BU980736.1|BU980736 HA21I16r HA Hordeum vulgare subsp. v... 50 8e-005
gb|BU981141.1|BU981141 HA22M02r HA Hordeum vulgare subsp. v... 50 8e-005
gb|BU981707.1|BU981707 HA24G11r HA Hordeum vulgare subsp. v... 50 8e-005
gb|BU981896.1|BU981896 HA24P03r HA Hordeum vulgare subsp. v... 50 8e-005
gb|BU981904.1|BU981904 HA24P11r HA Hordeum vulgare subsp. v... 50 8e-005
gb|BU981977.1|BU981977 HA25C18r HA Hordeum vulgare subsp. v... 50 8e-005
gb|BU982132.1|BU982132 HA25J22r HA Hordeum vulgare subsp. v... 50 8e-005
gb|BU982564.1|BU982564 HA26O22r HA Hordeum vulgare subsp. v... 50 8e-005
gb|BU982681.1|BU982681 HA27E18r HA Hordeum vulgare subsp. v... 50 8e-005
gb|BU982697.1|BU982697 HA27F13r HA Hordeum vulgare subsp. v... 50 8e-005
gb|BU982765.1|BU982765 HA27I18r HA Hordeum vulgare subsp. v... 50 8e-005
gb|BU982772.1|BU982772 HA27J02r HA Hordeum vulgare subsp. v... 50 8e-005
gb|BU982795.1|BU982795 HA27K04r HA Hordeum vulgare subsp. v... 50 8e-005
gb|BU983160.1|BU983160 HA28L22r HA Hordeum vulgare subsp. v... 50 8e-005
gb|BU983287.1|BU983287 HA29D03r HA Hordeum vulgare subsp. v... 50 8e-005
gb|BU983590.1|BU983590 HA30D18r HA Hordeum vulgare subsp. v... 50 8e-005
gb|BU983750.1|BU983750 HA30O18r HA Hordeum vulgare subsp. v... 50 8e-005
gb|BU983865.1|BU983865 HA31E12r HA Hordeum vulgare subsp. v... 50 8e-005
gb|CA026397.1|CA026397 HZ55M19r HZ Hordeum vulgare subsp. v... 50 8e-005
gb|CA029353.1|CA029353 HZ64P12r HZ Hordeum vulgare subsp. v... 50 8e-005
gb|CA029700.1|CA029700 HZ65P07r HZ Hordeum vulgare subsp. v... 50 8e-005
gb|CK124455.1|CK124455 BES1824108p16 BES1824 Hordeum vulgar... 50 8e-005
gb|AL450696.1|AL450696 AL450696 Hordeum vulgare Barke etiol... 48 3e-004
gb|BM371534.2|BM371534 EBma08_SQ003_B17_R maternal, 28 DPA,... 48 3e-004
gb|CA026452.1|CA026452 HZ55P08r HZ Hordeum vulgare subsp. v... 48 3e-004
gb|CD662911.1|CD662911 UCRHV18_03cd08_b1 Drought-stressed D... 48 3e-004
gb|BI778053.1|BI778053 EBro07_SQ002_B15_R root, 3 week, red... 46 0.001
gb|BG301300.2|BG301300 HVSMEb0020J03f Hordeum vulgare seedl... 46 0.001
gb|BM377694.1|BM377694 EBem04_SQ003_O11_R embryo, 12 DPA, n... 46 0.001
gb|BI780602.2|BI780602 EBes01_SQ001_G11_R embryo sac, 4-6 D... 46 0.001
gb|BI780671.2|BI780671 EBes01_SQ001_L11_R embryo sac, 4-6 D... 46 0.001
gb|BI780707.2|BI780707 EBes01_SQ001_O02_R embryo sac, 4-6 D... 46 0.001
gb|BM099241.2|BM099241 EBes01_SQ002_K11_R embryo sac, 4-6 D... 46 0.001
gb|BM099337.2|BM099337 EBes01_SQ002_P07_R embryo sac, 4-6 D... 46 0.001
gb|BM099445.2|BM099445 EBes01_SQ003_E08_R embryo sac, 4-6 D... 46 0.001
gb|BM099725.2|BM099725 EBes01_SQ004_B16_R embryo sac, 4-6 D... 46 0.001
gb|BM099871.2|BM099871 EBes01_SQ004_I09_R embryo sac, 4-6 D... 46 0.001
gb|BQ754908.1|BQ754908 EBed02_SQ003_C17_R endosperm, 8 DPA,... 46 0.001
gb|BQ755145.1|BQ755145 EBed02_SQ003_N17_R endosperm, 8 DPA,... 46 0.001
gb|BU968821.1|BU968821 HB08L03r BC Hordeum vulgare subsp. v... 46 0.001
gb|BU976956.1|BU976956 HA10J15r HA Hordeum vulgare subsp. v... 46 0.001
gb|BU977189.1|BU977189 HA10P20r HA Hordeum vulgare subsp. v... 46 0.001
gb|BF624797.2|BF624797 HVSMEa0017M08f Hordeum vulgare seedl... 44 0.005
gb|BF627396.2|BF627396 HVSMEb0004L24f Hordeum vulgare seedl... 44 0.005
gb|BF620467.2|BF620467 HVSMEc0019P16f Hordeum vulgare seedl... 44 0.005
gb|BI957238.1|BI957238 HVSMEn0008F03f Hordeum vulgare rachi... 44 0.005
gb|BF268094.2|BF268094 HV_CEa0019N15f Hordeum vulgare seedl... 44 0.005
gb|BF631391.2|BF631391 HVSMEb0015M22f Hordeum vulgare seedl... 42 0.020
gb|BM100311.2|BM100311 EBma01_SQ001_N02_R maternal, 4 DPA, ... 42 0.020
gb|BU977178.1|BU977178 HA10P14r HA Hordeum vulgare subsp. v... 42 0.020
gb|BF626001.1|BF626001 HVSMEa0015D09f Hordeum vulgare seedl... 40 0.077
gb|BG300557.1|BG300557 HVSMEb0017H18f Hordeum vulgare seedl... 40 0.077
gb|BI948228.1|BI948228 HVSMEl0008L01f Hordeum vulgare spike... 40 0.077
gb|BG415903.1|BG415903 HVSMEk0008O13f Hordeum vulgare testa... 40 0.077
gb|BI958398.1|BI958398 HVSMEn0014M15f Hordeum vulgare rachi... 40 0.077
gb|BQ464890.1|BQ464890 HU02A23r HU Hordeum vulgare subsp. v... 40 0.077
gb|BQ465455.1|BQ465455 HU03L04r HU Hordeum vulgare subsp. v... 40 0.077
gb|BI780649.2|BI780649 EBes01_SQ001_J24_R embryo sac, 4-6 D... 40 0.077
gb|CA008381.1|CA008381 HU10M12r HU Hordeum vulgare subsp. v... 40 0.077
gb|CK123836.1|CK123836 BES1824105m15 BES1824 Hordeum vulgar... 40 0.077
gb|AL499674.1|AL499674 AL499674 Hordeum vulgare Barke etiol... 38 0.31
gb|AL510749.1|AL510749 AL510749 Hordeum vulgare Barke devel... 38 0.31
gb|AL511932.1|AL511932 AL511932 Hordeum vulgare Barke devel... 38 0.31
gb|BF622282.3|BF622282 HVSMEa0002I09f Hordeum vulgare seedl... 38 0.31
gb|BG301200.1|BG301200 HVSMEb0019O14f Hordeum vulgare seedl... 38 0.31
gb|BG309305.1|BG309305 HVSMEc0007F12f Hordeum vulgare seedl... 38 0.31
gb|BF256658.2|BF256658 HVSMEf0010J24f Hordeum vulgare seedl... 38 0.31
gb|AW983195.2|AW983195 HVSMEg0008K03f Hordeum vulgare pre-a... 38 0.31
gb|BG366731.2|BG366731 HVSMEi0008A12f Hordeum vulgare 20 DA... 38 0.31
gb|BF263944.3|BF263944 HV_CEa0008B22f Hordeum vulgare seedl... 38 0.31
gb|BM376127.1|BM376127 EBma01_SQ002_G23_R maternal, 4 DPA, ... 38 0.31
gb|AV908953.1|AV908953 AV908953 K. Sato unpublished cDNA li... 38 0.31
gb|AV911394.1|AV911394 AV911394 K. Sato unpublished cDNA li... 38 0.31
gb|AV912579.1|AV912579 AV912579 K. Sato unpublished cDNA li... 38 0.31
gb|AV914934.1|AV914934 AV914934 K. Sato unpublished cDNA li... 38 0.31
gb|AV919352.1|AV919352 AV919352 K. Sato unpublished cDNA li... 38 0.31
gb|AV920041.1|AV920041 AV920041 K. Sato unpublished cDNA li... 38 0.31
gb|AV920052.1|AV920052 AV920052 K. Sato unpublished cDNA li... 38 0.31
gb|AV921462.1|AV921462 AV921462 K. Sato unpublished cDNA li... 38 0.31
gb|AV929484.1|AV929484 AV929484 K. Sato unpublished cDNA li... 38 0.31
gb|AV930144.1|AV930144 AV930144 K. Sato unpublished cDNA li... 38 0.31
gb|AV930233.1|AV930233 AV930233 K. Sato unpublished cDNA li... 38 0.31
gb|AV930576.1|AV930576 AV930576 K. Sato unpublished cDNA li... 38 0.31
gb|BM816829.1|BM816829 HC03D11_T3.ab1 HC Hordeum vulgare su... 38 0.31
gb|BJ447387.1|BJ447387 BJ447387 K. Sato unpublished cDNA li... 38 0.31
gb|BJ448484.1|BJ448484 BJ448484 K. Sato unpublished cDNA li... 38 0.31
gb|BJ448578.1|BJ448578 BJ448578 K. Sato unpublished cDNA li... 38 0.31
gb|BJ449740.1|BJ449740 BJ449740 K. Sato unpublished cDNA li... 38 0.31
gb|BJ455135.1|BJ455135 BJ455135 K. Sato unpublished cDNA li... 38 0.31
gb|BJ456205.1|BJ456205 BJ456205 K. Sato unpublished cDNA li... 38 0.31
gb|BJ456300.1|BJ456300 BJ456300 K. Sato unpublished cDNA li... 38 0.31
gb|BJ456466.1|BJ456466 BJ456466 K. Sato unpublished cDNA li... 38 0.31
gb|BJ456957.1|BJ456957 BJ456957 K. Sato unpublished cDNA li... 38 0.31
gb|BJ457160.1|BJ457160 BJ457160 K. Sato unpublished cDNA li... 38 0.31
gb|BJ476836.1|BJ476836 BJ476836 K. Sato unpublished cDNA li... 38 0.31
gb|BJ477276.1|BJ477276 BJ477276 K. Sato unpublished cDNA li... 38 0.31
gb|BQ464189.1|BQ464189 HF01J12T HF Hordeum vulgare subsp. v... 38 0.31
gb|BQ468143.1|BQ468143 HP01B19T HP Hordeum vulgare subsp. v... 38 0.31
gb|BQ659747.1|BQ659747 HF01J12w HF Hordeum vulgare subsp. v... 38 0.31
gb|BQ663709.1|BQ663709 HU03K19u HU Hordeum vulgare subsp. v... 38 0.31
gb|BM371678.2|BM371678 EBma08_SQ003_J07_R maternal, 28 DPA,... 38 0.31
gb|BI776368.2|BI776368 EBpi05_SQ001_A04_R pistil, 8 DPA, no... 38 0.31
gb|BQ756129.1|BQ756129 EBem05_SQ001_N22_R embryo, 14 DPA, n... 38 0.31
gb|BQ757143.1|BQ757143 EBem10_SQ003_A13_R embryo, 2 Day ger... 38 0.31
gb|BU993939.1|BU993939 HM05A17r HM Hordeum vulgare subsp. v... 38 0.31
gb|CA006185.1|CA006185 HU13B05u HU Hordeum vulgare subsp. v... 38 0.31
gb|CB877567.1|CB877567 HP05G12T HP Hordeum vulgare subsp. v... 38 0.31
gb|CD664063.1|CD664063 UCRHV18_07cd03_b1 Drought-stressed D... 38 0.31
gb|CK125067.1|CK125067 BES1824106i04 BES1824 Hordeum vulgar... 38 0.31
>gb|AL450781.1|AL450781 AL450781 Hordeum vulgare Barke etiolated leaves Hordeum vulgare
subsp. vulgare cDNA clone HK04D08u 5', mRNA sequence
Length = 568
Score = 77.8 bits (39), Expect = 4e-013
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 289 ctagcagcgcggcacggagacgccgcaggaggcgacgaccttgcgcgcgttggggctgtt 348
|||||||||||| |||| ||||||||| ||||||| | |||||| ||||||||||||||
Sbjct: 339 ctagcagcgcgggacggcgacgccgcacgaggcgagggtcttgcgggcgttggggctgtt 280
Query: 349 gatgtag 355
|||||||
Sbjct: 279 gatgtag 273
Score = 40.1 bits (20), Expect = 0.077
Identities = 41/48 (85%)
Strand = Plus / Minus
Query: 378 cgaactggcagaagcacccctgctgcgccttgaggttggagcagcacg 425
||||||||||||||||||| |||| ||| ||||||| ||||||||
Sbjct: 250 cgaactggcagaagcacccacgctggttctttaggttggcgcagcacg 203
>gb|AL499944.1|AL499944 AL499944 Hordeum vulgare Barke etiolated leaves Hordeum vulgare
subsp. vulgare cDNA clone HK04D08r 3', mRNA sequence
Length = 593
Score = 77.8 bits (39), Expect = 4e-013
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 289 ctagcagcgcggcacggagacgccgcaggaggcgacgaccttgcgcgcgttggggctgtt 348
|||||||||||| |||| ||||||||| ||||||| | |||||| ||||||||||||||
Sbjct: 343 ctagcagcgcgggacggcgacgccgcacgaggcgagggtcttgcgggcgttggggctgtt 402
Query: 349 gatgtag 355
|||||||
Sbjct: 403 gatgtag 409
Score = 38.2 bits (19), Expect = 0.31
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 378 cgaactggcagaagcaccc 396
|||||||||||||||||||
Sbjct: 432 cgaactggcagaagcaccc 450
>gb|BF622970.2|BF622970 HVSMEa0012G06f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0012G06f, mRNA sequence
Length = 788
Score = 77.8 bits (39), Expect = 4e-013
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 289 ctagcagcgcggcacggagacgccgcaggaggcgacgaccttgcgcgcgttggggctgtt 348
|||||||||||| |||| ||||||||| ||||||| | |||||| ||||||||||||||
Sbjct: 333 ctagcagcgcgggacggcgacgccgcacgaggcgagggtcttgcgggcgttggggctgtt 274
Query: 349 gatgtag 355
|||||||
Sbjct: 273 gatgtag 267
Score = 40.1 bits (20), Expect = 0.077
Identities = 41/48 (85%)
Strand = Plus / Minus
Query: 378 cgaactggcagaagcacccctgctgcgccttgaggttggagcagcacg 425
||||||||||||||||||| |||| ||| ||||||| ||||||||
Sbjct: 244 cgaactggcagaagcacccacgctggttctttaggttggcgcagcacg 197
>gb|BF627122.2|BF627122 HVSMEb0004A04f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0004A04f, mRNA sequence
Length = 779
Score = 77.8 bits (39), Expect = 4e-013
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 289 ctagcagcgcggcacggagacgccgcaggaggcgacgaccttgcgcgcgttggggctgtt 348
|||||||||||| |||| ||||||||| ||||||| | |||||| ||||||||||||||
Sbjct: 245 ctagcagcgcgggacggtgacgccgcacgaggcgagggtcttgcgggcgttggggctgtt 186
Query: 349 gatgtag 355
|||||||
Sbjct: 185 gatgtag 179
Score = 40.1 bits (20), Expect = 0.077
Identities = 41/48 (85%)
Strand = Plus / Minus
Query: 378 cgaactggcagaagcacccctgctgcgccttgaggttggagcagcacg 425
||||||||||||||||||| |||| ||| ||||||| ||||||||
Sbjct: 156 cgaactggcagaagcacccacgctggttctttaggttggcgcagcacg 109
>gb|BG414351.1|BG414351 HVSMEk0001K20f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0001K20f, mRNA sequence
Length = 571
Score = 77.8 bits (39), Expect = 4e-013
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 289 ctagcagcgcggcacggagacgccgcaggaggcgacgaccttgcgcgcgttggggctgtt 348
|||||||||||| |||| ||||||||| ||||||| | |||||| ||||||||||||||
Sbjct: 335 ctagcagcgcgggacggcgacgccgcacgaggcgagggtcttgcgggcgttggggctgtt 276
Query: 349 gatgtag 355
|||||||
Sbjct: 275 gatgtag 269
Score = 40.1 bits (20), Expect = 0.077
Identities = 41/48 (85%)
Strand = Plus / Minus
Query: 378 cgaactggcagaagcacccctgctgcgccttgaggttggagcagcacg 425
||||||||||||||||||| |||| ||| ||||||| ||||||||
Sbjct: 246 cgaactggcagaagcacccacgctggttctttaggttggcgcagcacg 199
>gb|BF628536.3|BF628536 HVSMEb0006H11f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0006H11f, mRNA sequence
Length = 580
Score = 77.8 bits (39), Expect = 4e-013
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 289 ctagcagcgcggcacggagacgccgcaggaggcgacgaccttgcgcgcgttggggctgtt 348
|||||||||||| |||| ||||||||| ||||||| | |||||| ||||||||||||||
Sbjct: 341 ctagcagcgcgggacggcgacgccgcacgaggcgagggtcttgcgggcgttggggctgtt 282
Query: 349 gatgtag 355
|||||||
Sbjct: 281 gatgtag 275
Score = 40.1 bits (20), Expect = 0.077
Identities = 41/48 (85%)
Strand = Plus / Minus
Query: 378 cgaactggcagaagcacccctgctgcgccttgaggttggagcagcacg 425
||||||||||||||||||| |||| ||| ||||||| ||||||||
Sbjct: 252 cgaactggcagaagcacccacgctggttctttaggttggcgcagcacg 205
>gb|AW982444.3|AW982444 HVSMEg0003F03f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0003F03f, mRNA sequence
Length = 635
Score = 77.8 bits (39), Expect = 4e-013
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 289 ctagcagcgcggcacggagacgccgcaggaggcgacgaccttgcgcgcgttggggctgtt 348
|||||||||||| |||| ||||||||| ||||||| | |||||| ||||||||||||||
Sbjct: 340 ctagcagcgcgggacggcgacgccgcacgaggcgagggtcttgcgggcgttggggctgtt 281
Query: 349 gatgtag 355
|||||||
Sbjct: 280 gatgtag 274
Score = 40.1 bits (20), Expect = 0.077
Identities = 41/48 (85%)
Strand = Plus / Minus
Query: 378 cgaactggcagaagcacccctgctgcgccttgaggttggagcagcacg 425
||||||||||||||||||| |||| ||| ||||||| ||||||||
Sbjct: 251 cgaactggcagaagcacccacgctggttctttaggttggcgcagcacg 204
>gb|BF265772.3|BF265772 HV_CEa0013E19f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0013E19f, mRNA sequence
Length = 674
Score = 77.8 bits (39), Expect = 4e-013
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 289 ctagcagcgcggcacggagacgccgcaggaggcgacgaccttgcgcgcgttggggctgtt 348
|||||||||||| |||| ||||||||| ||||||| | |||||| ||||||||||||||
Sbjct: 336 ctagcagcgcgggacggcgacgccgcacgaggcgagggtcttgcgggcgttggggctgtt 277
Query: 349 gatgtag 355
|||||||
Sbjct: 276 gatgtag 270
Score = 40.1 bits (20), Expect = 0.077
Identities = 41/48 (85%)
Strand = Plus / Minus
Query: 378 cgaactggcagaagcacccctgctgcgccttgaggttggagcagcacg 425
||||||||||||||||||| |||| ||| ||||||| ||||||||
Sbjct: 247 cgaactggcagaagcacccacgctggttctttaggttggcgcagcacg 200
>gb|BE214724.3|BE214724 HV_CEb0004F20f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0004F20f, mRNA sequence
Length = 580
Score = 77.8 bits (39), Expect = 4e-013
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 289 ctagcagcgcggcacggagacgccgcaggaggcgacgaccttgcgcgcgttggggctgtt 348
|||||||||||| |||| ||||||||| ||||||| | |||||| ||||||||||||||
Sbjct: 341 ctagcagcgcgggacggcgacgccgcacgaggcgagggtcttgcgggcgttggggctgtt 282
Query: 349 gatgtag 355
|||||||
Sbjct: 281 gatgtag 275
Score = 40.1 bits (20), Expect = 0.077
Identities = 41/48 (85%)
Strand = Plus / Minus
Query: 378 cgaactggcagaagcacccctgctgcgccttgaggttggagcagcacg 425
||||||||||||||||||| |||| ||| ||||||| ||||||||
Sbjct: 252 cgaactggcagaagcacccacgctggttctttaggttggcgcagcacg 205
>gb|BQ661744.1|BQ661744 HP01B19w HP Hordeum vulgare subsp. vulgare cDNA clone HP01B19
3-PRIME, mRNA sequence
Length = 503
Score = 77.8 bits (39), Expect = 4e-013
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 289 ctagcagcgcggcacggagacgccgcaggaggcgacgaccttgcgcgcgttggggctgtt 348
|||||||||||| |||| ||||||||| ||||||| | |||||| ||||||||||||||
Sbjct: 306 ctagcagcgcgggacggcgacgccgcacgaggcgagggtcttgcgggcgttggggctgtt 365
Query: 349 gatgtag 355
|||||||
Sbjct: 366 gatgtag 372
Score = 40.1 bits (20), Expect = 0.077
Identities = 41/48 (85%)
Strand = Plus / Plus
Query: 378 cgaactggcagaagcacccctgctgcgccttgaggttggagcagcacg 425
||||||||||||||||||| |||| ||| ||||||| ||||||||
Sbjct: 395 cgaactggcagaagcacccacgctggttctttaggttggcgcagcacg 442
>gb|BI777935.2|BI777935 EBro07_SQ001_G06_R root, 3 week, reduced light, cv Optic, EBro07
Hordeum vulgare subsp. vulgare cDNA clone
EBro07_SQ001_G06 5', mRNA sequence
Length = 452
Score = 77.8 bits (39), Expect = 4e-013
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 289 ctagcagcgcggcacggagacgccgcaggaggcgacgaccttgcgcgcgttggggctgtt 348
|||||||||||| |||| ||||||||| ||||||| | |||||| ||||||||||||||
Sbjct: 143 ctagcagcgcgggacggcgacgccgcacgaggcgagggtcttgcgggcgttggggctgtt 84
Query: 349 gatgtag 355
|||||||
Sbjct: 83 gatgtag 77
Score = 40.1 bits (20), Expect = 0.077
Identities = 41/48 (85%)
Strand = Plus / Minus
Query: 378 cgaactggcagaagcacccctgctgcgccttgaggttggagcagcacg 425
||||||||||||||||||| |||| ||| ||||||| ||||||||
Sbjct: 54 cgaactggcagaagcacccacgctggttcttcaggttggcgcagcacg 7
>gb|CA022845.1|CA022845 HZ44I09r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ44I09
5-PRIME, mRNA sequence
Length = 612
Score = 77.8 bits (39), Expect = 4e-013
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 289 ctagcagcgcggcacggagacgccgcaggaggcgacgaccttgcgcgcgttggggctgtt 348
|||||||||||| |||| ||||||||| ||||||| | |||||| ||||||||||||||
Sbjct: 351 ctagcagcgcgggacggcgacgccgcacgaggcgagggtcttgcgggcgttggggctgtt 292
Query: 349 gatgtag 355
|||||||
Sbjct: 291 gatgtag 285
Score = 40.1 bits (20), Expect = 0.077
Identities = 41/48 (85%)
Strand = Plus / Minus
Query: 378 cgaactggcagaagcacccctgctgcgccttgaggttggagcagcacg 425
||||||||||||||||||| |||| ||| ||||||| ||||||||
Sbjct: 262 cgaactggcagaagcacccacgctggttctttaggttggcgcagcacg 215
>gb|CA029642.1|CA029642 HZ65M18r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ65M18
5-PRIME, mRNA sequence
Length = 530
Score = 77.8 bits (39), Expect = 4e-013
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 289 ctagcagcgcggcacggagacgccgcaggaggcgacgaccttgcgcgcgttggggctgtt 348
|||||||||||| |||| ||||||||| ||||||| | |||||| ||||||||||||||
Sbjct: 353 ctagcagcgcgggacggcgacgccgcacgaggcgagggtcttgcgggcgttggggctgtt 294
Query: 349 gatgtag 355
|||||||
Sbjct: 293 gatgtag 287
Score = 40.1 bits (20), Expect = 0.077
Identities = 41/48 (85%)
Strand = Plus / Minus
Query: 378 cgaactggcagaagcacccctgctgcgccttgaggttggagcagcacg 425
||||||||||||||||||| |||| ||| ||||||| ||||||||
Sbjct: 264 cgaactggcagaagcacccacgctggttctttaggttggcgcagcacg 217
>gb|CB877870.1|CB877870 HP06H16T HP Hordeum vulgare subsp. vulgare cDNA clone HP06H16
5-PRIME, mRNA sequence
Length = 581
Score = 77.8 bits (39), Expect = 4e-013
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 289 ctagcagcgcggcacggagacgccgcaggaggcgacgaccttgcgcgcgttggggctgtt 348
|||||||||||| |||| ||||||||| ||||||| | |||||| ||||||||||||||
Sbjct: 351 ctagcagcgcgggacggcgacgccgcacgaggcgagggtcttgcgggcgttggggctgtt 292
Query: 349 gatgtag 355
|||||||
Sbjct: 291 gatgtag 285
Score = 40.1 bits (20), Expect = 0.077
Identities = 41/48 (85%)
Strand = Plus / Minus
Query: 378 cgaactggcagaagcacccctgctgcgccttgaggttggagcagcacg 425
||||||||||||||||||| |||| ||| ||||||| ||||||||
Sbjct: 262 cgaactggcagaagcacccacgctggttctttaggttggcgcagcacg 215
>gb|CB878360.1|CB878360 HP08E08T HP Hordeum vulgare subsp. vulgare cDNA clone HP08E08
5-PRIME, mRNA sequence
Length = 540
Score = 77.8 bits (39), Expect = 4e-013
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 289 ctagcagcgcggcacggagacgccgcaggaggcgacgaccttgcgcgcgttggggctgtt 348
|||||||||||| |||| ||||||||| ||||||| | |||||| ||||||||||||||
Sbjct: 344 ctagcagcgcgggacggcgacgccgcacgaggcgagggtcttgcgggcgttggggctgtt 285
Query: 349 gatgtag 355
|||||||
Sbjct: 284 gatgtag 278
Score = 40.1 bits (20), Expect = 0.077
Identities = 41/48 (85%)
Strand = Plus / Minus
Query: 378 cgaactggcagaagcacccctgctgcgccttgaggttggagcagcacg 425
||||||||||||||||||| |||| ||| ||||||| ||||||||
Sbjct: 255 cgaactggcagaagcacccacgctggttctttaggttggcgcagcacg 208
>gb|CD662289.1|CD662289 UCRHV18_01aa11_b1 Drought-stressed Dicktoo barley epidermis cDNA
library Hordeum vulgare subsp. vulgare cDNA clone
UCRHV18_01aa11, mRNA sequence
Length = 614
Score = 77.8 bits (39), Expect = 4e-013
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 289 ctagcagcgcggcacggagacgccgcaggaggcgacgaccttgcgcgcgttggggctgtt 348
|||||||||||| |||| ||||||||| ||||||| | |||||| ||||||||||||||
Sbjct: 338 ctagcagcgcgggacggcgacgccgcacgaggcgagggtcttgcgggcgttggggctgtt 397
Query: 349 gatgtag 355
|||||||
Sbjct: 398 gatgtag 404
Score = 40.1 bits (20), Expect = 0.077
Identities = 41/48 (85%)
Strand = Plus / Plus
Query: 378 cgaactggcagaagcacccctgctgcgccttgaggttggagcagcacg 425
||||||||||||||||||| |||| ||| ||||||| ||||||||
Sbjct: 427 cgaactggcagaagcacccacgctggttctttaggttggcgcagcacg 474
>gb|BI954274.1|BI954274 HVSMEm0016P04f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0016P04f, mRNA sequence
Length = 667
Score = 71.9 bits (36), Expect = 2e-011
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 289 ctagcagcgcggcacggagacgccgcaggaggcgacgaccttgcgcgcgttggggctgtt 348
|||||||||||| ||| ||||||||| ||||||| | |||||| ||||||||||||||
Sbjct: 304 ctagcagcgcgggncggcgacgccgcacgaggcgagggtcttgcgggcgttggggctgtt 245
Query: 349 gatgtag 355
|||||||
Sbjct: 244 gatgtag 238
Score = 40.1 bits (20), Expect = 0.077
Identities = 41/48 (85%)
Strand = Plus / Minus
Query: 378 cgaactggcagaagcacccctgctgcgccttgaggttggagcagcacg 425
||||||||||||||||||| |||| ||| ||||||| ||||||||
Sbjct: 215 cgaactggcagaagcacccacgctggttctttaggttggcgcagcacg 168
>gb|BF624508.1|BF624508 HVSMEa0016P10f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0016P10f, mRNA sequence
Length = 788
Score = 69.9 bits (35), Expect = 9e-011
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 289 ctagcagcgcggcacggagacgccgcaggaggcgacgaccttgcgcgcgttggggctgtt 348
|||||||||||| ||| ||||||||| ||||||| | |||||| ||||||||||||||
Sbjct: 335 ctagcagcgcgggtcggcgacgccgcacgaggcgagggtcttgcgggcgttggggctgtt 276
Query: 349 gatgtag 355
|||||||
Sbjct: 275 gatgtag 269
Score = 40.1 bits (20), Expect = 0.077
Identities = 41/48 (85%)
Strand = Plus / Minus
Query: 378 cgaactggcagaagcacccctgctgcgccttgaggttggagcagcacg 425
||||||||||||||||||| |||| ||| ||||||| ||||||||
Sbjct: 246 cgaactggcagaagcacccacgctggttctttaggttggcgcagcacg 199
>gb|BF628745.2|BF628745 HVSMEb0007M01f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0007M01f, mRNA sequence
Length = 698
Score = 69.9 bits (35), Expect = 9e-011
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 293 cagcgcggcacggagacgccgcaggaggcgacgaccttgcgcgcgttggggctgttgatg 352
|||||||| |||| ||||||||| ||||||| | |||||| ||||||||||||||||||
Sbjct: 333 cagcgcgggacggcgacgccgcacgaggcgagggtcttgcgggcgttggggctgttgatg 392
Query: 353 tag 355
|||
Sbjct: 393 tag 395
Score = 38.2 bits (19), Expect = 0.31
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 378 cgaactggcagaagcaccc 396
|||||||||||||||||||
Sbjct: 418 cgaactggcagaagcaccc 436
>emb|X57270.1|HVLTPMR H.vulgare mRNA for putative phospholipid transfer protein
Length = 517
Score = 63.9 bits (32), Expect = 5e-009
Identities = 65/76 (85%)
Strand = Plus / Minus
Query: 331 gcgcgcgttggggctgttgatgtagcgcccgtaggtggggttcttcacgaactggcagaa 390
|||||||| |||||| | | |||| |||||||| |||||| ||| ||| ||||||| ||
Sbjct: 326 gcgcgcgtgtgggctgctcacgtagtgcccgtagttggggtccttgacgtactggcacaa 267
Query: 391 gcacccctgctgcgcc 406
||||||||||||||||
Sbjct: 266 gcacccctgctgcgcc 251
>emb|X69793.1|HVLTP2A H.vulgare ltp2 gene for lipid transfer protein
Length = 1327
Score = 63.9 bits (32), Expect = 5e-009
Identities = 65/76 (85%)
Strand = Plus / Minus
Query: 331 gcgcgcgttggggctgttgatgtagcgcccgtaggtggggttcttcacgaactggcagaa 390
|||||||| |||||| | | |||| |||||||| |||||| ||| ||| ||||||| ||
Sbjct: 1136 gcgcgcgtgtgggctgctcacgtagtgcccgtagttggggtccttgacgtactggcacaa 1077
Query: 391 gcacccctgctgcgcc 406
||||||||||||||||
Sbjct: 1076 gcacccctgctgcgcc 1061
>gb|BI947161.1|BI947161 HVSMEl0003P16f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0003P16f, mRNA sequence
Length = 1040
Score = 61.9 bits (31), Expect = 2e-008
Identities = 55/63 (87%)
Strand = Plus / Minus
Query: 293 cagcgcggcacggagacgccgcaggaggcgacgaccttgcgcgcgttggggctgttgatg 352
|||||||| |||| |||||||| ||||||| | |||||| ||||||||||||||||||
Sbjct: 311 cagcgcgggacggccacgccgcacgaggcgagggtcttgcgggcgttggggctgttgatg 252
Query: 353 tag 355
|||
Sbjct: 251 tag 249
Score = 40.1 bits (20), Expect = 0.077
Identities = 41/48 (85%)
Strand = Plus / Minus
Query: 378 cgaactggcagaagcacccctgctgcgccttgaggttggagcagcacg 425
||||||||||||||||||| |||| ||| ||||||| ||||||||
Sbjct: 226 cgaactggcagaagcacccacgctggttctttaggttggcgcagcacg 179
>gb|BF264965.2|BF264965 HV_CEa0010O03f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0010O03f, mRNA sequence
Length = 893
Score = 61.9 bits (31), Expect = 2e-008
Identities = 58/67 (86%)
Strand = Plus / Minus
Query: 289 ctagcagcgcggcacggagacgccgcaggaggcgacgaccttgcgcgcgttggggctgtt 348
|||||||||||| ||| | ||||||| ||||||| | |||||| ||||||||||||||
Sbjct: 344 ctagcagcgcgggccggcggcgccgcacgaggcgagggtcttgcgggcgttggggctgtt 285
Query: 349 gatgtag 355
|||||||
Sbjct: 284 gatgtag 278
Score = 40.1 bits (20), Expect = 0.077
Identities = 41/48 (85%)
Strand = Plus / Minus
Query: 378 cgaactggcagaagcacccctgctgcgccttgaggttggagcagcacg 425
||||||||||||||||||| |||| ||| ||||||| ||||||||
Sbjct: 255 cgaactggcagaagcacccacgctggttctttaggttggcgcagcacg 208
>gb|AF039024.1|AF039024 Hordeum vulgare 7 kDa lipid transfer protein (LTP-ne) mRNA,
complete cds
Length = 565
Score = 58.0 bits (29), Expect = 3e-007
Identities = 95/117 (81%)
Strand = Plus / Minus
Query: 289 ctagcagcgcggcacggagacgccgcaggaggcgacgaccttgcgcgcgttggggctgtt 348
|||||||||||| |||| || |||||||||| || | | ||| |||| |||||| |
Sbjct: 358 ctagcagcgcgggacggcgaggccgcaggagaggagggtgtcgcgggcgtgtgggctggt 299
Query: 349 gatgtagcgcccgtaggtggggttcttcacgaactggcagaagcacccctgctgcgc 405
||||||||| ||| || ||||| ||| || |||||||||||||||||||||||||
Sbjct: 298 gatgtagcggccgagggcggggtccttggcgtactggcagaagcacccctgctgcgc 242
>gb|AL506145.1|AL506145 AL506145 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY02D02T 5',
mRNA sequence
Length = 497
Score = 56.0 bits (28), Expect = 1e-006
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 331 gcgcgcgttggggctgttgatgtagcgcccgtaggtggggttcttcacgaactggcagaa 390
|||||||| |||||| | | |||| |||||||| |||||| ||| ||| ||||||| ||
Sbjct: 319 gcgcgcgtgtgggctgctcacgtagtgcccgtagttggggtccttgacgtactggcacaa 260
Query: 391 gcacccctgctg 402
||||||||||||
Sbjct: 259 gcacccctgctg 248
>gb|AL509557.1|AL509557 AL509557 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY02D02u 3',
mRNA sequence
Length = 498
Score = 56.0 bits (28), Expect = 1e-006
Identities = 61/72 (84%)
Strand = Plus / Plus
Query: 331 gcgcgcgttggggctgttgatgtagcgcccgtaggtggggttcttcacgaactggcagaa 390
|||||||| |||||| | | |||| |||||||| |||||| ||| ||| ||||||| ||
Sbjct: 179 gcgcgcgtgtgggctgctcacgtagtgcccgtagttggggtccttgacgtactggcacaa 238
Query: 391 gcacccctgctg 402
||||||||||||
Sbjct: 239 gcacccctgctg 250
>gb|BE195893.2|BE195893 HVSMEh0090M08f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0090M08f, mRNA sequence
Length = 485
Score = 56.0 bits (28), Expect = 1e-006
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 331 gcgcgcgttggggctgttgatgtagcgcccgtaggtggggttcttcacgaactggcagaa 390
|||||||| |||||| | | |||| |||||||| |||||| ||| ||| ||||||| ||
Sbjct: 319 gcgcgcgtgtgggctgctcacgtagtgcccgtagttggggtccttgacgtactggcacaa 260
Query: 391 gcacccctgctg 402
||||||||||||
Sbjct: 259 gcacccctgctg 248
>gb|BG414424.1|BG414424 HVSMEk0002H09f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0002H09f, mRNA sequence
Length = 923
Score = 56.0 bits (28), Expect = 1e-006
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 331 gcgcgcgttggggctgttgatgtagcgcccgtaggtggggttcttcacgaactggcagaa 390
|||||||| |||||| | | |||| |||||||| |||||| ||| ||| ||||||| ||
Sbjct: 314 gcgcgcgtgtgggctgctcacgtagtgcccgtagttggggtccttgacgtactggcacaa 255
Query: 391 gcacccctgctg 402
||||||||||||
Sbjct: 254 gcacccctgctg 243
>gb|BG417843.1|BG417843 HVSMEk0019L08f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0019L08f, mRNA sequence
Length = 440
Score = 56.0 bits (28), Expect = 1e-006
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 331 gcgcgcgttggggctgttgatgtagcgcccgtaggtggggttcttcacgaactggcagaa 390
|||||||| |||||| | | |||| |||||||| |||||| ||| ||| ||||||| ||
Sbjct: 314 gcgcgcgtgtgggctgctcacgtagtgcccgtagttggggtccttgacgtactggcacaa 255
Query: 391 gcacccctgctg 402
||||||||||||
Sbjct: 254 gcacccctgctg 243
>gb|BE193986.3|BE193986 HVSMEh0083D03f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0083D03f, mRNA sequence
Length = 568
Score = 56.0 bits (28), Expect = 1e-006
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 331 gcgcgcgttggggctgttgatgtagcgcccgtaggtggggttcttcacgaactggcagaa 390
|||||||| |||||| | | |||| |||||||| |||||| ||| ||| ||||||| ||
Sbjct: 320 gcgcgcgtgtgggctgctcacgtagtgcccgtagttggggtccttgacgtactggcacaa 261
Query: 391 gcacccctgctg 402
||||||||||||
Sbjct: 260 gcacccctgctg 249
>gb|BE454408.3|BE454408 HVSMEh0094F18f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0094F18f, mRNA sequence
Length = 519
Score = 56.0 bits (28), Expect = 1e-006
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 331 gcgcgcgttggggctgttgatgtagcgcccgtaggtggggttcttcacgaactggcagaa 390
|||||||| |||||| | | |||| |||||||| |||||| ||| ||| ||||||| ||
Sbjct: 319 gcgcgcgtgtgggctgctcacgtagtgcccgtagttggggtccttgacgtactggcacaa 260
Query: 391 gcacccctgctg 402
||||||||||||
Sbjct: 259 gcacccctgctg 248
>gb|BE454454.3|BE454454 HVSMEh0094H20f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0094H20f, mRNA sequence
Length = 501
Score = 56.0 bits (28), Expect = 1e-006
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 331 gcgcgcgttggggctgttgatgtagcgcccgtaggtggggttcttcacgaactggcagaa 390
|||||||| |||||| | | |||| |||||||| |||||| ||| ||| ||||||| ||
Sbjct: 315 gcgcgcgtgtgggctgctcacgtagtgcccgtagttggggtccttgacgtactggcacaa 256
Query: 391 gcacccctgctg 402
||||||||||||
Sbjct: 255 gcacccctgctg 244
>gb|BE602382.3|BE602382 HVSMEh0098L08f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0098L08f, mRNA sequence
Length = 507
Score = 56.0 bits (28), Expect = 1e-006
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 331 gcgcgcgttggggctgttgatgtagcgcccgtaggtggggttcttcacgaactggcagaa 390
|||||||| |||||| | | |||| |||||||| |||||| ||| ||| ||||||| ||
Sbjct: 315 gcgcgcgtgtgggctgctcacgtagtgcccgtagttggggtccttgacgtactggcacaa 256
Query: 391 gcacccctgctg 402
||||||||||||
Sbjct: 255 gcacccctgctg 244
>gb|BG416600.2|BG416600 HVSMEk0013G16f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0013G16f, mRNA sequence
Length = 494
Score = 56.0 bits (28), Expect = 1e-006
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 331 gcgcgcgttggggctgttgatgtagcgcccgtaggtggggttcttcacgaactggcagaa 390
|||||||| |||||| | | |||| |||||||| |||||| ||| ||| ||||||| ||
Sbjct: 314 gcgcgcgtgtgggctgctcacgtagtgcccgtagttggggtccttgacgtactggcacaa 255
Query: 391 gcacccctgctg 402
||||||||||||
Sbjct: 254 gcacccctgctg 243
>gb|BG416940.2|BG416940 HVSMEk0015E14f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0015E14f, mRNA sequence
Length = 881
Score = 56.0 bits (28), Expect = 1e-006
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 331 gcgcgcgttggggctgttgatgtagcgcccgtaggtggggttcttcacgaactggcagaa 390
|||||||| |||||| | | |||| |||||||| |||||| ||| ||| ||||||| ||
Sbjct: 317 gcgcgcgtgtgggctgctcacgtagtgcccgtagttggggtccttgacgtactggcacaa 258
Query: 391 gcacccctgctg 402
||||||||||||
Sbjct: 257 gcacccctgctg 246
>gb|BQ464245.1|BQ464245 HF01L21T HF Hordeum vulgare subsp. vulgare cDNA clone HF01L21
5-PRIME, mRNA sequence
Length = 310
Score = 56.0 bits (28), Expect = 1e-006
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 331 gcgcgcgttggggctgttgatgtagcgcccgtaggtggggttcttcacgaactggcagaa 390
|||||||| |||||| | | |||| |||||||| |||||| ||| ||| ||||||| ||
Sbjct: 156 gcgcgcgtgtgggctgctcacgtagtgcccgtagttggggtccttgacgtactggcacaa 97
Query: 391 gcacccctgctg 402
||||||||||||
Sbjct: 96 gcacccctgctg 85
>gb|BQ464277.1|BQ464277 HF01N05T HF Hordeum vulgare subsp. vulgare cDNA clone HF01N05
5-PRIME, mRNA sequence
Length = 349
Score = 56.0 bits (28), Expect = 1e-006
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 331 gcgcgcgttggggctgttgatgtagcgcccgtaggtggggttcttcacgaactggcagaa 390
|||||||| |||||| | | |||| |||||||| |||||| ||| ||| ||||||| ||
Sbjct: 198 gcgcgcgtgtgggctgctcacgtagtgcccgtagttggggtccttgacgtactggcacaa 139
Query: 391 gcacccctgctg 402
||||||||||||
Sbjct: 138 gcacccctgctg 127
>gb|BQ472815.1|BQ472815 HB01G10r BC Hordeum vulgare subsp. vulgare cDNA clone HB01G10
5-PRIME, mRNA sequence
Length = 419
Score = 56.0 bits (28), Expect = 1e-006
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 331 gcgcgcgttggggctgttgatgtagcgcccgtaggtggggttcttcacgaactggcagaa 390
|||||||| |||||| | | |||| |||||||| |||||| ||| ||| ||||||| ||
Sbjct: 234 gcgcgcgtgtgggctgctcacgtagtgcccgtagttggggtccttgacgtactggcacaa 175
Query: 391 gcacccctgctg 402
||||||||||||
Sbjct: 174 gcacccctgctg 163
>gb|BQ659795.1|BQ659795 HF01L21w HF Hordeum vulgare subsp. vulgare cDNA clone HF01L21
3-PRIME, mRNA sequence
Length = 286
Score = 56.0 bits (28), Expect = 1e-006
Identities = 61/72 (84%)
Strand = Plus / Plus
Query: 331 gcgcgcgttggggctgttgatgtagcgcccgtaggtggggttcttcacgaactggcagaa 390
|||||||| |||||| | | |||| |||||||| |||||| ||| ||| ||||||| ||
Sbjct: 162 gcgcgcgtgtgggctgctcacgtagtgcccgtagttggggtccttgacgtactggcacaa 221
Query: 391 gcacccctgctg 402
||||||||||||
Sbjct: 222 gcacccctgctg 233
>gb|BQ659823.1|BQ659823 HF01N05w HF Hordeum vulgare subsp. vulgare cDNA clone HF01N05
3-PRIME, mRNA sequence
Length = 326
Score = 56.0 bits (28), Expect = 1e-006
Identities = 61/72 (84%)
Strand = Plus / Plus
Query: 331 gcgcgcgttggggctgttgatgtagcgcccgtaggtggggttcttcacgaactggcagaa 390
|||||||| |||||| | | |||| |||||||| |||||| ||| ||| ||||||| ||
Sbjct: 162 gcgcgcgtgtgggctgctcacgtagtgcccgtagttggggtccttgacgtactggcacaa 221
Query: 391 gcacccctgctg 402
||||||||||||
Sbjct: 222 gcacccctgctg 233
>gb|BM441756.2|BM441756 EBed07_SQ001_H13_R endosperm, 28 DPA, no treatment, cv Optic,
EBed07 Hordeum vulgare subsp. vulgare cDNA clone
EBed07_SQ001_H13 5', mRNA sequence
Length = 499
Score = 56.0 bits (28), Expect = 1e-006
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 331 gcgcgcgttggggctgttgatgtagcgcccgtaggtggggttcttcacgaactggcagaa 390
|||||||| |||||| | | |||| |||||||| |||||| ||| ||| ||||||| ||
Sbjct: 314 gcgcgcgtgtgggctgctcacgtagtgcccgtagttggggtccttgacgtactggcacaa 255
Query: 391 gcacccctgctg 402
||||||||||||
Sbjct: 254 gcacccctgctg 243
>gb|BI780129.2|BI780129 EBma08_SQ001_H20_R maternal, 28 DPA, no treatment, cv Optic, EBma08
Hordeum vulgare subsp. vulgare cDNA clone
EBma08_SQ001_H20 5', mRNA sequence
Length = 476
Score = 56.0 bits (28), Expect = 1e-006
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 331 gcgcgcgttggggctgttgatgtagcgcccgtaggtggggttcttcacgaactggcagaa 390
|||||||| |||||| | | |||| |||||||| |||||| ||| ||| ||||||| ||
Sbjct: 314 gcgcgcgtgtgggctgctcacgtagtgcccgtagttggggtccttgacgtactggcacaa 255
Query: 391 gcacccctgctg 402
||||||||||||
Sbjct: 254 gcacccctgctg 243
>gb|BI780155.2|BI780155 EBma08_SQ001_I24_R maternal, 28 DPA, no treatment, cv Optic, EBma08
Hordeum vulgare subsp. vulgare cDNA clone
EBma08_SQ001_I24 5', mRNA sequence
Length = 477
Score = 56.0 bits (28), Expect = 1e-006
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 331 gcgcgcgttggggctgttgatgtagcgcccgtaggtggggttcttcacgaactggcagaa 390
|||||||| |||||| | | |||| |||||||| |||||| ||| ||| ||||||| ||
Sbjct: 314 gcgcgcgtgtgggctgctcacgtagtgcccgtagttggggtccttgacgtactggcacaa 255
Query: 391 gcacccctgctg 402
||||||||||||
Sbjct: 254 gcacccctgctg 243
>gb|BI780209.2|BI780209 EBma08_SQ001_L12_R maternal, 28 DPA, no treatment, cv Optic, EBma08
Hordeum vulgare subsp. vulgare cDNA clone
EBma08_SQ001_L12 5', mRNA sequence
Length = 499
Score = 56.0 bits (28), Expect = 1e-006
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 331 gcgcgcgttggggctgttgatgtagcgcccgtaggtggggttcttcacgaactggcagaa 390
|||||||| |||||| | | |||| |||||||| |||||| ||| ||| ||||||| ||
Sbjct: 308 gcgcgcgtgtgggctgctcacgtagtgcccgtagttggggtccttgacgtactggcacaa 249
Query: 391 gcacccctgctg 402
||||||||||||
Sbjct: 248 gcacccctgctg 237
>gb|BM371301.2|BM371301 EBma08_SQ002_D06_R maternal, 28 DPA, no treatment, cv Optic, EBma08
Hordeum vulgare subsp. vulgare cDNA clone
EBma08_SQ002_D06 5', mRNA sequence
Length = 489
Score = 56.0 bits (28), Expect = 1e-006
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 331 gcgcgcgttggggctgttgatgtagcgcccgtaggtggggttcttcacgaactggcagaa 390
|||||||| |||||| | | |||| |||||||| |||||| ||| ||| ||||||| ||
Sbjct: 314 gcgcgcgtgtgggctgctcacgtagtgcccgtagttggggtccttgacgtactggcacaa 255
Query: 391 gcacccctgctg 402
||||||||||||
Sbjct: 254 gcacccctgctg 243
>gb|BM371785.2|BM371785 EBma08_SQ003_P11_R maternal, 28 DPA, no treatment, cv Optic, EBma08
Hordeum vulgare subsp. vulgare cDNA clone
EBma08_SQ003_P11 5', mRNA sequence
Length = 425
Score = 56.0 bits (28), Expect = 1e-006
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 331 gcgcgcgttggggctgttgatgtagcgcccgtaggtggggttcttcacgaactggcagaa 390
|||||||| |||||| | | |||| |||||||| |||||| ||| ||| ||||||| ||
Sbjct: 314 gcgcgcgtgtgggctgctcacgtagtgcccgtagttggggtccttgacgtactggcacaa 255
Query: 391 gcacccctgctg 402
||||||||||||
Sbjct: 254 gcacccctgctg 243
>gb|BM372068.2|BM372068 EBma08_SQ004_N22_R maternal, 28 DPA, no treatment, cv Optic, EBma08
Hordeum vulgare subsp. vulgare cDNA clone
EBma08_SQ004_N22 5', mRNA sequence
Length = 442
Score = 56.0 bits (28), Expect = 1e-006
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 331 gcgcgcgttggggctgttgatgtagcgcccgtaggtggggttcttcacgaactggcagaa 390
|||||||| |||||| | | |||| |||||||| |||||| ||| ||| ||||||| ||
Sbjct: 314 gcgcgcgtgtgggctgctcacgtagtgcccgtagttggggtccttgacgtactggcacaa 255
Query: 391 gcacccctgctg 402
||||||||||||
Sbjct: 254 gcacccctgctg 243
>gb|BQ754579.1|BQ754579 EBed01_SQ003_D11_R endosperm, 6 DPA, no treatment, cv Optic, EBed01
Hordeum vulgare subsp. vulgare cDNA clone
EBed01_SQ003_D11 5', mRNA sequence
Length = 451
Score = 56.0 bits (28), Expect = 1e-006
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 331 gcgcgcgttggggctgttgatgtagcgcccgtaggtggggttcttcacgaactggcagaa 390
|||||||| |||||| | | |||| |||||||| |||||| ||| ||| ||||||| ||
Sbjct: 310 gcgcgcgtgtgggctgctcacgtagtgcccgtagttggggtccttgacgtactggcacaa 251
Query: 391 gcacccctgctg 402
||||||||||||
Sbjct: 250 gcacccctgctg 239
>gb|BQ755302.1|BQ755302 EBed07_SQ002_A12_R endosperm, 28 DPA, no treatment, cv Optic,
EBed07 Hordeum vulgare subsp. vulgare cDNA clone
EBed07_SQ002_A12 5', mRNA sequence
Length = 462
Score = 56.0 bits (28), Expect = 1e-006
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 331 gcgcgcgttggggctgttgatgtagcgcccgtaggtggggttcttcacgaactggcagaa 390
|||||||| |||||| | | |||| |||||||| |||||| ||| ||| ||||||| ||
Sbjct: 306 gcgcgcgtgtgggctgctcacgtagtgcccgtagttggggtccttgacgtactggcacaa 247
Query: 391 gcacccctgctg 402
||||||||||||
Sbjct: 246 gcacccctgctg 235
>gb|BQ755587.1|BQ755587 EBed07_SQ003_E01_R endosperm, 28 DPA, no treatment, cv Optic,
EBed07 Hordeum vulgare subsp. vulgare cDNA clone
EBed07_SQ003_E01 5', mRNA sequence
Length = 476
Score = 56.0 bits (28), Expect = 1e-006
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 331 gcgcgcgttggggctgttgatgtagcgcccgtaggtggggttcttcacgaactggcagaa 390
|||||||| |||||| | | |||| |||||||| |||||| ||| ||| ||||||| ||
Sbjct: 314 gcgcgcgtgtgggctgctcacgtagtgcccgtagttggggtccttgacgtactggcacaa 255
Query: 391 gcacccctgctg 402
||||||||||||
Sbjct: 254 gcacccctgctg 243
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 86,470
Number of Sequences: 312970
Number of extensions: 86470
Number of successful extensions: 28384
Number of sequences better than 0.5: 283
Number of HSP's better than 0.5 without gapping: 283
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 27779
Number of HSP's gapped (non-prelim): 604
length of query: 572
length of database: 175,134,539
effective HSP length: 19
effective length of query: 553
effective length of database: 169,188,109
effective search space: 93561024277
effective search space used: 93561024277
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)