BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1738959.2.2
(1454 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BM816179.1|BM816179 HC02E01_T3.ab1 HC Hordeum vulgare su... 1001 0.0
gb|BQ764503.1|BQ764503 EBca01_SQ004_F05_R carpel, pre-anthe... 922 0.0
gb|BF260651.2|BF260651 HVSMEf0022J07f Hordeum vulgare seedl... 856 0.0
gb|BQ472535.1|BQ472535 HB09E05T BC Hordeum vulgare subsp. v... 852 0.0
gb|AV913736.1|AV913736 AV913736 K. Sato unpublished cDNA li... 844 0.0
gb|AV915529.1|AV915529 AV915529 K. Sato unpublished cDNA li... 842 0.0
gb|BU968354.1|BU968354 HB07E05r BC Hordeum vulgare subsp. v... 839 0.0
gb|BU970369.1|BU970369 HB14G11r BC Hordeum vulgare subsp. v... 819 0.0
gb|AL503252.1|AL503252 AL503252 Hordeum vulgare Barke roots... 811 0.0
gb|BJ450393.1|BJ450393 BJ450393 K. Sato unpublished cDNA li... 811 0.0
gb|BU994833.1|BU994833 HM08F16r HM Hordeum vulgare subsp. v... 809 0.0
gb|AV913569.1|AV913569 AV913569 K. Sato unpublished cDNA li... 805 0.0
gb|BJ464957.1|BJ464957 BJ464957 K. Sato unpublished cDNA li... 805 0.0
gb|AL506691.1|AL506691 AL506691 Hordeum vulgare Barke devel... 801 0.0
gb|BJ465124.1|BJ465124 BJ465124 K. Sato unpublished cDNA li... 801 0.0
gb|BE454127.2|BE454127 HVSMEh0080M10f Hordeum vulgare 5-45 ... 799 0.0
gb|BU973256.1|BU973256 HB24E24r BC Hordeum vulgare subsp. v... 799 0.0
gb|CK123742.1|CK123742 BES1824105d21 BES1824 Hordeum vulgar... 799 0.0
gb|BJ463694.1|BJ463694 BJ463694 K. Sato unpublished cDNA li... 797 0.0
gb|BM101485.2|BM101485 EBpi01_SQ003_P22_R pistil, 1 DPA, no... 787 0.0
gb|BI959464.1|BI959464 HVSMEn0019M08f Hordeum vulgare rachi... 785 0.0
gb|AV912858.1|AV912858 AV912858 K. Sato unpublished cDNA li... 779 0.0
gb|AL506538.1|AL506538 AL506538 Hordeum vulgare Barke devel... 777 0.0
gb|AL507716.1|AL507716 AL507716 Hordeum vulgare Barke devel... 773 0.0
gb|AL506572.1|AL506572 AL506572 Hordeum vulgare Barke devel... 763 0.0
gb|BJ463235.1|BJ463235 BJ463235 K. Sato unpublished cDNA li... 763 0.0
gb|AV913652.1|AV913652 AV913652 K. Sato unpublished cDNA li... 759 0.0
gb|BQ472320.1|BQ472320 HB09P05T BC Hordeum vulgare subsp. v... 755 0.0
gb|BF255870.2|BF255870 HVSMEf0008A22f Hordeum vulgare seedl... 747 0.0
gb|BJ454281.1|BJ454281 BJ454281 K. Sato unpublished cDNA li... 745 0.0
gb|BU988522.1|BU988522 HF17O04r HF Hordeum vulgare subsp. v... 745 0.0
gb|BF260905.2|BF260905 HVSMEf0023E01f Hordeum vulgare seedl... 743 0.0
gb|CA032127.1|CA032127 HX12B15r HX Hordeum vulgare subsp. v... 737 0.0
gb|BQ762329.1|BQ762329 EBro01_SQ005_C16_R root, 3 week, hyd... 733 0.0
gb|CB883635.1|CB883635 HQ02N10w HQ Hordeum vulgare subsp. v... 733 0.0
gb|BM443503.2|BM443503 EBro02_SQ005_G14_R root, 3 week, hyd... 729 0.0
gb|BM371206.2|BM371206 EBro04_SQ003_N12_R root, 3 week, sal... 729 0.0
gb|BQ471323.1|BQ471323 HV02B15r HV Hordeum vulgare subsp. v... 728 0.0
gb|BU968575.1|BU968575 HB07P05r BC Hordeum vulgare subsp. v... 728 0.0
gb|BU987452.1|BU987452 HF14M18r HF Hordeum vulgare subsp. v... 728 0.0
gb|CA018953.1|CA018953 HV10D08r HV Hordeum vulgare subsp. v... 728 0.0
gb|CA029444.1|CA029444 HZ65D19r HZ Hordeum vulgare subsp. v... 728 0.0
gb|AL503569.1|AL503569 AL503569 Hordeum vulgare Barke roots... 726 0.0
gb|BE231175.2|BE231175 HVSMEg0017G06f Hordeum vulgare pre-a... 726 0.0
gb|BM370094.2|BM370094 EBro08_SQ002_P14_R root, 3 week, dro... 726 0.0
gb|BI959050.1|BI959050 HVSMEn0017O17f Hordeum vulgare rachi... 716 0.0
gb|AV915934.1|AV915934 AV915934 K. Sato unpublished cDNA li... 716 0.0
gb|BU997112.1|BU997112 HI06P03r HI Hordeum vulgare subsp. v... 714 0.0
gb|BI960443.1|BI960443 HVSMEn0024J22f Hordeum vulgare rachi... 712 0.0
gb|BJ462617.1|BJ462617 BJ462617 K. Sato unpublished cDNA li... 710 0.0
gb|BI960578.1|BI960578 HVSMEn0025C16f Hordeum vulgare rachi... 708 0.0
gb|AV913541.1|AV913541 AV913541 K. Sato unpublished cDNA li... 708 0.0
gb|AL508905.1|AL508905 AL508905 Hordeum vulgare Barke devel... 706 0.0
gb|AL505134.1|AL505134 AL505134 Hordeum vulgare Barke roots... 700 0.0
gb|BF256552.2|BF256552 HVSMEf0010F04f Hordeum vulgare seedl... 700 0.0
gb|BM372796.2|BM372796 EBpi05_SQ003_P06_R pistil, 8 DPA, no... 700 0.0
gb|AL504464.1|AL504464 AL504464 Hordeum vulgare Barke roots... 698 0.0
gb|BJ462500.1|BJ462500 BJ462500 K. Sato unpublished cDNA li... 698 0.0
gb|CB883216.1|CB883216 HQ01I23w HQ Hordeum vulgare subsp. v... 698 0.0
gb|CB883563.1|CB883563 HQ02K03w HQ Hordeum vulgare subsp. v... 696 0.0
gb|BI960239.1|BI960239 HVSMEn0023O02f Hordeum vulgare rachi... 692 0.0
gb|BI959302.1|BI959302 HVSMEn0019C13f Hordeum vulgare rachi... 688 0.0
gb|BJ464187.1|BJ464187 BJ464187 K. Sato unpublished cDNA li... 688 0.0
gb|BQ472096.1|BQ472096 HV04G11r HV Hordeum vulgare subsp. v... 688 0.0
gb|BJ464032.1|BJ464032 BJ464032 K. Sato unpublished cDNA li... 686 0.0
gb|AW983194.3|AW983194 HVSMEg0008K01f Hordeum vulgare pre-a... 684 0.0
gb|BI956677.1|BI956677 HVSMEn0004L08f Hordeum vulgare rachi... 678 0.0
gb|AV916097.1|AV916097 AV916097 K. Sato unpublished cDNA li... 674 0.0
gb|BI959986.1|BI959986 HVSMEn0022L24f Hordeum vulgare rachi... 672 0.0
gb|BI959520.1|BI959520 HVSMEn0020A11f Hordeum vulgare rachi... 666 0.0
gb|AL505043.1|AL505043 AL505043 Hordeum vulgare Barke roots... 664 0.0
gb|BI960675.1|BI960675 HVSMEn0025M06f Hordeum vulgare rachi... 662 0.0
gb|BJ464470.1|BJ464470 BJ464470 K. Sato unpublished cDNA li... 662 0.0
gb|BM816178.1|BM816178 HC01C12_T3.ab1 HC Hordeum vulgare su... 658 0.0
gb|BQ764525.1|BQ764525 EBca01_SQ004_K01_R carpel, pre-anthe... 648 0.0
gb|BJ464409.1|BJ464409 BJ464409 K. Sato unpublished cDNA li... 644 0.0
gb|AV919156.1|AV919156 AV919156 K. Sato unpublished cDNA li... 638 0.0
gb|CA024332.1|CA024332 HZ49A08r HZ Hordeum vulgare subsp. v... 632 e-180
gb|BU970086.1|BU970086 HB13I23r BC Hordeum vulgare subsp. v... 630 e-179
gb|AL503719.1|AL503719 AL503719 Hordeum vulgare Barke roots... 628 e-178
gb|BE455988.2|BE455988 HVSMEg0019B24f Hordeum vulgare pre-a... 624 e-177
gb|BI958643.1|BI958643 HVSMEn0016A19f Hordeum vulgare rachi... 624 e-177
gb|BJ463352.1|BJ463352 BJ463352 K. Sato unpublished cDNA li... 624 e-177
gb|AV914111.1|AV914111 AV914111 K. Sato unpublished cDNA li... 620 e-176
gb|BM100357.2|BM100357 EBma01_SQ001_P14_R maternal, 4 DPA, ... 620 e-176
gb|BI958511.1|BI958511 HVSMEn0015G01f Hordeum vulgare rachi... 615 e-174
gb|AV917183.1|AV917183 AV917183 K. Sato unpublished cDNA li... 615 e-174
gb|AV917132.1|AV917132 AV917132 K. Sato unpublished cDNA li... 611 e-173
gb|AL505227.1|AL505227 AL505227 Hordeum vulgare Barke roots... 607 e-172
gb|BF254843.2|BF254843 HVSMEf0005D08f Hordeum vulgare seedl... 599 e-169
gb|BE558803.2|BE558803 HV_CEb0020G21f Hordeum vulgare seedl... 595 e-168
gb|BI958948.1|BI958948 HVSMEn0017G03f Hordeum vulgare rachi... 595 e-168
gb|BJ463970.1|BJ463970 BJ463970 K. Sato unpublished cDNA li... 593 e-168
gb|BM443026.2|BM443026 EBro02_SQ002_D20_R root, 3 week, hyd... 583 e-165
gb|CA025273.1|CA025273 HZ51K17r HZ Hordeum vulgare subsp. v... 583 e-165
gb|BF254210.3|BF254210 HVSMEf0003F07f Hordeum vulgare seedl... 581 e-164
gb|AV921718.1|AV921718 AV921718 K. Sato unpublished cDNA li... 581 e-164
gb|BF258305.2|BF258305 HVSMEf0015F24f Hordeum vulgare seedl... 577 e-163
gb|AV916290.1|AV916290 AV916290 K. Sato unpublished cDNA li... 577 e-163
gb|BQ471213.1|BQ471213 HV01J15T HV Hordeum vulgare subsp. v... 577 e-163
gb|BG343225.2|BG343225 HVSMEg0005C09f Hordeum vulgare pre-a... 575 e-162
gb|AV914462.1|AV914462 AV914462 K. Sato unpublished cDNA li... 575 e-162
gb|AV913739.1|AV913739 AV913739 K. Sato unpublished cDNA li... 571 e-161
gb|BQ658243.1|BQ658243 HB09P05w BC Hordeum vulgare subsp. v... 565 e-159
gb|BM096945.2|BM096945 EBpi07_SQ001_O03_R pistil, 12 DPA, n... 565 e-159
gb|BQ767952.1|BQ767952 EBro08_SQ010_E07_R root, 3 week, dro... 563 e-159
gb|AV914047.1|AV914047 AV914047 K. Sato unpublished cDNA li... 555 e-156
gb|BQ759253.1|BQ759253 EBpi01_SQ003_D23_R pistil, 1 DPA, no... 555 e-156
gb|BF256909.2|BF256909 HVSMEf0011F12f Hordeum vulgare seedl... 549 e-155
gb|AV910273.1|AV910273 AV910273 K. Sato unpublished cDNA li... 549 e-155
gb|BJ465044.1|BJ465044 BJ465044 K. Sato unpublished cDNA li... 547 e-154
gb|CK124252.1|CK124252 BES1824108b19 BES1824 Hordeum vulgar... 535 e-150
gb|BI959906.1|BI959906 HVSMEn0022F08f Hordeum vulgare rachi... 529 e-149
gb|BI777152.2|BI777152 EBro03_SQ002_C19_R root, 3 week, wat... 527 e-148
gb|AL504038.1|AL504038 AL504038 Hordeum vulgare Barke roots... 521 e-146
gb|AV916815.1|AV916815 AV916815 K. Sato unpublished cDNA li... 517 e-145
gb|AV916858.1|AV916858 AV916858 K. Sato unpublished cDNA li... 517 e-145
gb|AV913654.1|AV913654 AV913654 K. Sato unpublished cDNA li... 515 e-144
gb|BG344221.1|BG344221 HVSMEg0008D09f Hordeum vulgare pre-a... 511 e-143
gb|BU974107.1|BU974107 HB26O16r BC Hordeum vulgare subsp. v... 509 e-143
gb|CA031137.1|CA031137 HX09B24r HX Hordeum vulgare subsp. v... 509 e-143
gb|AV913350.1|AV913350 AV913350 K. Sato unpublished cDNA li... 507 e-142
gb|BI949739.1|BI949739 HVSMEl0015L04f Hordeum vulgare spike... 504 e-141
gb|BE421348.1|BE421348 HWM008.D05 ITEC HWM Barley Leaf Libr... 494 e-138
gb|BU975281.1|BU975281 HB30K14r BC Hordeum vulgare subsp. v... 494 e-138
gb|AW982946.2|AW982946 HVSMEg0004K04f Hordeum vulgare pre-a... 490 e-137
gb|BJ466302.1|BJ466302 BJ466302 K. Sato unpublished cDNA li... 490 e-137
gb|BF622469.2|BF622469 HVSMEa0004G21f Hordeum vulgare seedl... 482 e-134
gb|BQ459353.1|BQ459353 HA01F21r HA Hordeum vulgare subsp. v... 482 e-134
gb|BI777611.2|BI777611 EBro04_SQ001_M04_R root, 3 week, sal... 482 e-134
gb|AV914595.1|AV914595 AV914595 K. Sato unpublished cDNA li... 480 e-134
gb|BU981970.1|BU981970 HA25C09r HA Hordeum vulgare subsp. v... 480 e-134
gb|CA017396.1|CA017396 HV05B09r HV Hordeum vulgare subsp. v... 480 e-134
gb|BJ447460.1|BJ447460 BJ447460 K. Sato unpublished cDNA li... 476 e-132
gb|BI957317.1|BI957317 HVSMEn0008N14f Hordeum vulgare rachi... 474 e-132
gb|AL505937.1|AL505937 AL505937 Hordeum vulgare Barke roots... 466 e-129
gb|BE601679.3|BE601679 HVSMEh0099C15f Hordeum vulgare 5-45 ... 462 e-128
gb|BU966735.1|BU966735 HB02D04r BC Hordeum vulgare subsp. v... 462 e-128
gb|BF254657.1|BF254657 HVSMEf0004K11f Hordeum vulgare seedl... 456 e-126
gb|AV918871.1|AV918871 AV918871 K. Sato unpublished cDNA li... 456 e-126
gb|AV919513.1|AV919513 AV919513 K. Sato unpublished cDNA li... 456 e-126
gb|AV917603.1|AV917603 AV917603 K. Sato unpublished cDNA li... 454 e-126
gb|AV921216.1|AV921216 AV921216 K. Sato unpublished cDNA li... 454 e-126
gb|BJ467706.1|BJ467706 BJ467706 K. Sato unpublished cDNA li... 454 e-126
gb|BJ467865.1|BJ467865 BJ467865 K. Sato unpublished cDNA li... 454 e-126
gb|BJ466237.1|BJ466237 BJ466237 K. Sato unpublished cDNA li... 452 e-125
gb|BQ763954.1|BQ763954 EBro03_SQ005_J20_R root, 3 week, wat... 452 e-125
gb|AV919679.1|AV919679 AV919679 K. Sato unpublished cDNA li... 450 e-125
gb|BQ658402.1|BQ658402 HB09E05w BC Hordeum vulgare subsp. v... 450 e-125
gb|CA028466.1|CA028466 HZ62B03r HZ Hordeum vulgare subsp. v... 448 e-124
gb|BI946633.1|BI946633 HVSMEl0001F12f Hordeum vulgare spike... 446 e-124
gb|BI957315.1|BI957315 HVSMEn0008N10f Hordeum vulgare rachi... 446 e-124
gb|AV919076.1|AV919076 AV919076 K. Sato unpublished cDNA li... 444 e-123
gb|CA017402.1|CA017402 HV05B15r HV Hordeum vulgare subsp. v... 444 e-123
gb|BI959572.1|BI959572 HVSMEn0020E04f Hordeum vulgare rachi... 440 e-122
gb|BQ463306.1|BQ463306 HI04L17r HI Hordeum vulgare subsp. v... 436 e-121
gb|AV918649.1|AV918649 AV918649 K. Sato unpublished cDNA li... 430 e-119
gb|AV921346.1|AV921346 AV921346 K. Sato unpublished cDNA li... 428 e-118
gb|AV920629.1|AV920629 AV920629 K. Sato unpublished cDNA li... 424 e-117
gb|BF255229.2|BF255229 HVSMEf0006E21f Hordeum vulgare seedl... 420 e-116
gb|AV918957.1|AV918957 AV918957 K. Sato unpublished cDNA li... 410 e-113
gb|BJ457809.1|BJ457809 BJ457809 K. Sato unpublished cDNA li... 410 e-113
gb|BQ757049.1|BQ757049 EBem10_SQ002_K05_R embryo, 2 Day ger... 410 e-113
gb|BQ763511.1|BQ763511 EBro02_SQ008_I15_R root, 3 week, hyd... 402 e-110
gb|BQ660562.1|BQ660562 HI04D15u HI Hordeum vulgare subsp. v... 400 e-110
gb|AV918391.1|AV918391 AV918391 K. Sato unpublished cDNA li... 396 e-109
gb|AV921342.1|AV921342 AV921342 K. Sato unpublished cDNA li... 389 e-106
gb|BJ461814.1|BJ461814 BJ461814 K. Sato unpublished cDNA li... 389 e-106
gb|AV925726.1|AV925726 AV925726 K. Sato unpublished cDNA li... 383 e-104
gb|AV930865.1|AV930865 AV930865 K. Sato unpublished cDNA li... 383 e-104
gb|BJ465749.1|BJ465749 BJ465749 K. Sato unpublished cDNA li... 373 e-101
gb|BQ664682.1|BQ664682 HV04G11u HV Hordeum vulgare subsp. v... 371 e-101
gb|AV922111.1|AV922111 AV922111 K. Sato unpublished cDNA li... 365 3e-099
gb|BI959211.1|BI959211 HVSMEn0018K15f Hordeum vulgare rachi... 363 1e-098
gb|AV918994.1|AV918994 AV918994 K. Sato unpublished cDNA li... 361 4e-098
gb|AL510116.1|AL510116 AL510116 Hordeum vulgare Barke devel... 357 7e-097
gb|BU987625.1|BU987625 HF15E16r HF Hordeum vulgare subsp. v... 357 7e-097
gb|AV913689.1|AV913689 AV913689 K. Sato unpublished cDNA li... 355 3e-096
gb|AL509971.1|AL509971 AL509971 Hordeum vulgare Barke devel... 335 2e-090
gb|CA027749.1|CA027749 HZ59O13r HZ Hordeum vulgare subsp. v... 329 2e-088
gb|CA028829.1|CA028829 HZ63F24r HZ Hordeum vulgare subsp. v... 329 2e-088
gb|CA029120.1|CA029120 HZ64E05r HZ Hordeum vulgare subsp. v... 329 2e-088
gb|CB858420.1|CB858420 HI06P03w HI Hordeum vulgare subsp. v... 315 2e-084
gb|CB874388.1|CB874388 HX05B24w HX Hordeum vulgare subsp. v... 315 2e-084
gb|BG417116.1|BG417116 HVSMEk0016F09f Hordeum vulgare testa... 307 6e-082
gb|BF259181.2|BF259181 HVSMEf0017P24f Hordeum vulgare seedl... 303 9e-081
gb|AV914459.1|AV914459 AV914459 K. Sato unpublished cDNA li... 303 9e-081
gb|CB880960.1|CB880960 HM08F16w HM Hordeum vulgare subsp. v... 301 3e-080
gb|AV912428.1|AV912428 AV912428 K. Sato unpublished cDNA li... 299 1e-079
gb|BJ468273.1|BJ468273 BJ468273 K. Sato unpublished cDNA li... 295 2e-078
gb|AL502503.1|AL502503 AL502503 Hordeum vulgare Barke roots... 287 5e-076
gb|BJ467263.1|BJ467263 BJ467263 K. Sato unpublished cDNA li... 283 8e-075
gb|BI958082.1|BI958082 HVSMEn0013D12f Hordeum vulgare rachi... 278 5e-073
gb|AV930869.1|AV930869 AV930869 K. Sato unpublished cDNA li... 278 5e-073
gb|CA016125.1|CA016125 HV10D08u HV Hordeum vulgare subsp. v... 278 5e-073
gb|CA016785.1|CA016785 HV06E14u HV Hordeum vulgare subsp. v... 278 5e-073
gb|BJ466118.1|BJ466118 BJ466118 K. Sato unpublished cDNA li... 272 3e-071
gb|BQ664074.1|BQ664074 HV01J15w HV Hordeum vulgare subsp. v... 268 5e-070
gb|AL510212.1|AL510212 AL510212 Hordeum vulgare Barke devel... 264 7e-069
gb|AL511382.1|AL511382 AL511382 Hordeum vulgare Barke devel... 264 7e-069
gb|CA029754.1|CA029754 HX05B24r HX Hordeum vulgare subsp. v... 262 3e-068
gb|AL502326.1|AL502326 AL502326 Hordeum vulgare Barke roots... 256 2e-066
gb|AV918959.1|AV918959 AV918959 K. Sato unpublished cDNA li... 248 4e-064
gb|BG418023.1|BG418023 HVSMEk0020M24f Hordeum vulgare testa... 240 1e-061
gb|AL512029.1|AL512029 AL512029 Hordeum vulgare Barke devel... 236 2e-060
gb|BQ463156.1|BQ463156 HI04D15r HI Hordeum vulgare subsp. v... 236 2e-060
gb|BM374409.2|BM374409 EBpi03_SQ003_I17_R pistil, 4 DPA, no... 228 4e-058
gb|AL501786.1|AL501786 AL501786 Hordeum vulgare Barke roots... 226 2e-057
gb|BM100250.2|BM100250 EBma01_SQ001_K06_R maternal, 4 DPA, ... 216 2e-054
gb|AL501143.1|AL501143 AL501143 Hordeum vulgare Barke roots... 212 2e-053
gb|AL500988.1|AL500988 AL500988 Hordeum vulgare Barke roots... 192 2e-047
gb|BI947071.1|BI947071 HVSMEl0003I14f Hordeum vulgare spike... 192 2e-047
gb|BQ766960.1|BQ766960 EBro08_SQ007_H17_R root, 3 week, dro... 190 9e-047
gb|BU978745.1|BU978745 HA14C11r HA Hordeum vulgare subsp. v... 178 3e-043
gb|BI777035.2|BI777035 EBpi03_SQ001_L11_R pistil, 4 DPA, no... 168 3e-040
gb|AL506787.1|AL506787 AL506787 Hordeum vulgare Barke devel... 165 5e-039
gb|AL510990.1|AL510990 AL510990 Hordeum vulgare Barke devel... 165 5e-039
gb|BU985320.1|BU985320 HF06M15r HF Hordeum vulgare subsp. v... 165 5e-039
gb|AL500797.1|AL500797 AL500797 Hordeum vulgare Barke roots... 159 3e-037
gb|CB883595.1|CB883595 HQ02L14w HQ Hordeum vulgare subsp. v... 137 1e-030
gb|BI959184.1|BI959184 HVSMEn0018I15f Hordeum vulgare rachi... 135 5e-030
gb|AL500628.1|AL500628 AL500628 Hordeum vulgare Barke roots... 131 7e-029
gb|AL511048.1|AL511048 AL511048 Hordeum vulgare Barke devel... 131 7e-029
gb|CV058016.1|CV058016 BNEL33d7 Barley EST endosperm librar... 125 4e-027
gb|BG415404.1|BG415404 HVSMEk0006F24f Hordeum vulgare testa... 113 2e-023
gb|AJ434107.1|AJ434107 AJ434107 S00002 Hordeum vulgare subs... 113 2e-023
gb|AL502411.1|AL502411 AL502411 Hordeum vulgare Barke roots... 105 4e-021
gb|AJ433815.1|AJ433815 AJ433815 S00002 Hordeum vulgare subs... 105 4e-021
gb|BM101169.2|BM101169 EBpi01_SQ003_B14_R pistil, 1 DPA, no... 105 4e-021
gb|BE519985.3|BE519985 HV_CEb0021P11f Hordeum vulgare seedl... 101 6e-020
gb|AJ433757.1|AJ433757 AJ433757 S00002 Hordeum vulgare subs... 101 6e-020
gb|BQ756513.1|BQ756513 EBem09_SQ002_I18_R embryo, 1 Day ger... 101 6e-020
gb|AV833065.1|AV833065 AV833065 K. Sato unpublished cDNA li... 86 4e-015
gb|AV920923.1|AV920923 AV920923 K. Sato unpublished cDNA li... 84 1e-014
gb|BJ467168.1|BJ467168 BJ467168 K. Sato unpublished cDNA li... 84 1e-014
gb|BM100838.1|BM100838 EBpi01_SQ002_C08_R pistil, 1 DPA, no... 82 6e-014
gb|BM101292.1|BM101292 EBpi01_SQ003_H01_R pistil, 1 DPA, no... 82 6e-014
gb|AV921747.1|AV921747 AV921747 K. Sato unpublished cDNA li... 74 1e-011
gb|BF627578.2|BF627578 HVSMEb0005D17f Hordeum vulgare seedl... 66 4e-009
gb|AV914112.1|AV914112 AV914112 K. Sato unpublished cDNA li... 66 4e-009
gb|AV914847.1|AV914847 AV914847 K. Sato unpublished cDNA li... 66 4e-009
gb|AV915891.1|AV915891 AV915891 K. Sato unpublished cDNA li... 66 4e-009
gb|AV921006.1|AV921006 AV921006 K. Sato unpublished cDNA li... 66 4e-009
gb|BJ544684.1|BJ544684 BJ544684 K. Sato unpublished cDNA li... 66 4e-009
gb|BJ547041.1|BJ547041 BJ547041 K. Sato unpublished cDNA li... 66 4e-009
gb|BJ549498.1|BJ549498 BJ549498 K. Sato unpublished cDNA li... 66 4e-009
gb|AJ436637.1|AJ436637 AJ436637 S00002 Hordeum vulgare subs... 62 5e-008
gb|BJ466023.1|BJ466023 BJ466023 K. Sato unpublished cDNA li... 62 5e-008
gb|BM445096.2|BM445096 EBem09_SQ007_G19_R embryo, 1 Day ger... 62 5e-008
gb|CA020908.1|CA020908 HZ38G01r HZ Hordeum vulgare subsp. v... 62 5e-008
gb|BF258204.2|BF258204 HVSMEf0015B12f Hordeum vulgare seedl... 60 2e-007
gb|AV919157.1|AV919157 AV919157 K. Sato unpublished cDNA li... 60 2e-007
gb|BM816655.1|BM816655 HB01A07_T3.ab1 HB Hordeum vulgare su... 60 2e-007
gb|BQ471753.1|BQ471753 HV03F22r HV Hordeum vulgare subsp. v... 60 2e-007
gb|BM443008.2|BM443008 EBro02_SQ002_C21_R root, 3 week, hyd... 60 2e-007
gb|BU969174.1|BU969174 HB10M08r BC Hordeum vulgare subsp. v... 60 2e-007
gb|BU972745.1|BU972745 HB22J12r BC Hordeum vulgare subsp. v... 60 2e-007
gb|BU988947.1|BU988947 HF19D20r HF Hordeum vulgare subsp. v... 60 2e-007
gb|BU996667.1|BU996667 HM14F14r HM Hordeum vulgare subsp. v... 60 2e-007
gb|CA002810.1|CA002810 HS08J14r HS Hordeum vulgare subsp. v... 60 2e-007
gb|BM376735.2|BM376735 EBem05_SQ003_B13_R embryo, 14 DPA, n... 58 9e-007
gb|AL510003.1|AL510003 AL510003 Hordeum vulgare Barke devel... 56 3e-006
gb|BE455469.2|BE455469 HVSMEg0017F01f Hordeum vulgare pre-a... 56 3e-006
gb|BG418221.1|BG418221 HVSMEk0021P03f Hordeum vulgare testa... 56 3e-006
gb|BI960078.1|BI960078 HVSMEn0023C04f Hordeum vulgare rachi... 56 3e-006
gb|AV920970.1|AV920970 AV920970 K. Sato unpublished cDNA li... 56 3e-006
gb|BJ449493.1|BJ449493 BJ449493 K. Sato unpublished cDNA li... 56 3e-006
gb|BJ456934.1|BJ456934 BJ456934 K. Sato unpublished cDNA li... 56 3e-006
gb|BM370165.2|BM370165 EBro08_SQ003_D02_R root, 3 week, dro... 56 3e-006
gb|BU972342.1|BU972342 HB21G01r BC Hordeum vulgare subsp. v... 56 3e-006
gb|CB877081.1|CB877081 HP03I02T HP Hordeum vulgare subsp. v... 56 3e-006
gb|CB879741.1|CB879741 HP03I02w HP Hordeum vulgare subsp. v... 56 3e-006
gb|BF620279.2|BF620279 HVSMEc0019E20f Hordeum vulgare seedl... 54 1e-005
gb|AV915820.1|AV915820 AV915820 K. Sato unpublished cDNA li... 54 1e-005
gb|BU979918.1|BU979918 HA17M18r HA Hordeum vulgare subsp. v... 54 1e-005
gb|BJ547904.1|BJ547904 BJ547904 K. Sato unpublished cDNA li... 54 1e-005
gb|CB877082.1|CB877082 HP03I03T HP Hordeum vulgare subsp. v... 54 1e-005
gb|CK124463.1|CK124463 BES1824109d17 BES1824 Hordeum vulgar... 54 1e-005
gb|AL510717.1|AL510717 AL510717 Hordeum vulgare Barke devel... 52 5e-005
gb|BI958920.1|BI958920 HVSMEn0017D23f Hordeum vulgare rachi... 52 5e-005
gb|BF253522.3|BF253522 HVSMEf0001C17f Hordeum vulgare seedl... 52 5e-005
gb|BE215685.3|BE215685 HV_CEb0007P22f Hordeum vulgare seedl... 52 5e-005
gb|AV909659.1|AV909659 AV909659 K. Sato unpublished cDNA li... 52 5e-005
gb|AV911559.1|AV911559 AV911559 K. Sato unpublished cDNA li... 52 5e-005
gb|AJ463158.1|AJ463158 AJ463158 S00002 Hordeum vulgare subs... 52 5e-005
gb|AJ463159.1|AJ463159 AJ463159 S00002 Hordeum vulgare subs... 52 5e-005
gb|BQ757608.1|BQ757608 EBem10_SQ004_K13_R embryo, 2 Day ger... 52 5e-005
gb|BU970828.1|BU970828 HB15M21r BC Hordeum vulgare subsp. v... 52 5e-005
gb|BJ544855.1|BJ544855 BJ544855 K. Sato unpublished cDNA li... 52 5e-005
gb|BJ546155.1|BJ546155 BJ546155 K. Sato unpublished cDNA li... 52 5e-005
gb|BJ546337.1|BJ546337 BJ546337 K. Sato unpublished cDNA li... 52 5e-005
gb|BJ548879.1|BJ548879 BJ548879 K. Sato unpublished cDNA li... 52 5e-005
gb|CV062330.1|CV062330 BNEL78h1 Barley EST endosperm librar... 52 5e-005
gb|CV063225.1|CV063225 BNEL88a10 Barley EST endosperm libra... 52 5e-005
gb|BQ763370.1|BQ763370 EBro02_SQ008_K01_R root, 3 week, hyd... 50 2e-004
gb|AJ436651.1|AJ436651 AJ436651 S00002 Hordeum vulgare subs... 48 8e-004
gb|AL505147.1|AL505147 AL505147 Hordeum vulgare Barke roots... 46 0.003
gb|BG344265.1|BG344265 HVSMEg0008H09f Hordeum vulgare pre-a... 46 0.003
gb|BJ464354.1|BJ464354 BJ464354 K. Sato unpublished cDNA li... 46 0.003
gb|BU972129.1|BU972129 HB20L03r BC Hordeum vulgare subsp. v... 46 0.003
gb|BJ549915.1|BJ549915 BJ549915 K. Sato unpublished cDNA li... 46 0.003
gb|CB879349.1|CB879349 HP11N15T HP Hordeum vulgare subsp. v... 46 0.003
gb|BF256948.2|BF256948 HVSMEf0011H06f Hordeum vulgare seedl... 44 0.013
gb|BI951009.1|BI951009 HVSMEl0024A04f Hordeum vulgare spike... 44 0.013
gb|BF260520.3|BF260520 HVSMEf0022D16f Hordeum vulgare seedl... 44 0.013
gb|BQ756196.1|BQ756196 EBem05_SQ004_C06_R embryo, 14 DPA, n... 44 0.013
gb|AL502423.1|AL502423 AL502423 Hordeum vulgare Barke roots... 42 0.051
gb|CA017471.1|CA017471 HV05E22r HV Hordeum vulgare subsp. v... 42 0.051
gb|BF617242.2|BF617242 HVSMEc0015C19f Hordeum vulgare seedl... 40 0.20
gb|BF259502.2|BF259502 HVSMEf0019I02f Hordeum vulgare seedl... 40 0.20
gb|BE060857.3|BE060857 HVSMEg0013J21f Hordeum vulgare pre-a... 40 0.20
gb|AV922156.1|AV922156 AV922156 K. Sato unpublished cDNA li... 40 0.20
gb|BQ757060.1|BQ757060 EBem10_SQ002_K18_R embryo, 2 Day ger... 40 0.20
>gb|BM816179.1|BM816179 HC02E01_T3.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC02E01_T3.ab1 similar to dTDP-glucose 4,6-dehydratase,,
mRNA sequence
Length = 789
Score = 1001 bits (505), Expect = 0.0
Identities = 716/785 (91%), Gaps = 1/785 (0%)
Strand = Plus / Minus
Query: 486 atcaactcctt-cacattctcagcaagttccagcatggtgaattcacctgggttccccaa 544
||||||||||| ||| |||||||||||| |||||||||||||||||||||||||||| |
Sbjct: 786 atcaactcctttcacgttctcagcaagtcccagcatggtgaattcacctgggttcccaat 727
Query: 545 gttaatcggcccagtgttgtttccattcatcagtctaataagaccatcaaccatatcggc 604
|||||| || ||||||| | ||||||||||| | |||||||||| |||||||| ||
Sbjct: 726 gttaatgggtccagtgtgtctcccattcatcagcttcataagaccattgaccatatcagc 667
Query: 605 gacatagcagaagctcctagtctgtgttcctggcttctggacagtaaggggttcgccacg 664
|| ||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||
Sbjct: 666 aacgtagcagaagctcctagtctgtgttcctggcttctggacagtcagggcttcaccacg 607
Query: 665 cacagcctgagcaatgaagttgctaacaacacggccatcgtcaatgttcatccttggtcc 724
| ||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||
Sbjct: 606 tatggcctgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtcc 547
Query: 725 ataggtgttgaaaatcctggcaattcggatttcaatgccatgctgcctgtgatagtcgaa 784
|||||||||||||||||||||||| ||||| |||||||| ||||||||||| ||||||||
Sbjct: 546 ataggtgttgaaaatcctggcaatacggatctcaatgccgtgctgcctgtggtagtcgaa 487
Query: 785 catcagcgtctctgctacacgcttaccctcatcataacagctcctgactccaattgggtt 844
|||||| ||||| |||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 486 catcagtgtctcagctacacgcttaccctcatcgtagcagctcctgactccaattgggtt 427
Query: 845 aacattgccccagtaggcctcggtttgaggatgctcaagcggatcaccataaacttcaga 904
||||||||||||||||||||| || |||||||||||||| ||||||||||||||||||||
Sbjct: 426 aacattgccccagtaggcctccgtctgaggatgctcaagaggatcaccataaacttcaga 367
Query: 905 tgttgatgtcaacaaaatcctagctccaactctctttgcaaggcccagcatgttcagggt 964
|| || |||||||| || ||||||||||||||||||||||| || |||||||||| |||
Sbjct: 366 ggtcgaagtcaacaatattctagctccaactctctttgcaagtccaagcatgttcaaggt 307
Query: 965 accaataacatttgtcttgatggtcttaacaggattgtgcttgtagaagattggtgaagc 1024
||||| ||||| |||||||||||||| ||||| ||||||||||||||||||||||| ||
Sbjct: 306 cccaatgacattcgtcttgatggtcttgacagggttgtgcttgtagaagattggtgaggc 247
Query: 1025 agggcaagcaaggtgatagatttggtcaacctccacaagaagcggctcggtgacatcatg 1084
|||||||||||||||||||||||||||||||||||| || || || ||||||||||| ||
Sbjct: 246 agggcaagcaaggtgatagatttggtcaacctccacgagcagtggttcggtgacatcgtg 187
Query: 1085 acggatgagctcaaatcttgggtgtccgatccacttcttcaggttatcttttgaaccagt 1144
|||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 186 acggatgagctcaaatcttgggtggccgatccacttcttcaggttgtcttttgaaccagt 127
Query: 1145 gaaaaagttatcagcaacaatgacctcgtgcttctcgttctccatgagcttgtccacgag 1204
||||||||| ||||||||||||||||||| |||||||||||||||||||||||| |||||
Sbjct: 126 gaaaaagttgtcagcaacaatgacctcgttcttctcgttctccatgagcttgtcgacgag 67
Query: 1205 gtgcgagccgatgaagcccgccccaccagtgaccaggatccgcaggttagcctggaagaa 1264
|||||||||||||||||| || || || |||||||||||||||| ||| |||||||||||
Sbjct: 66 gtgcgagccgatgaagccagctccgccggtgaccaggatccgcatgttggcctggaagaa 7
Query: 1265 cttgg 1269
|||||
Sbjct: 6 cttgg 2
>gb|BQ764503.1|BQ764503 EBca01_SQ004_F05_R carpel, pre-anthesis, no treatment, cv Optic,
EBca01 Hordeum vulgare subsp. vulgare cDNA clone
EBca01_SQ004_F05 5', mRNA sequence
Length = 744
Score = 922 bits (465), Expect = 0.0
Identities = 643/701 (91%), Gaps = 1/701 (0%)
Strand = Plus / Minus
Query: 609 tagcagaagctcctagtctgtgttcctggcttctggacagtaaggggttcgccacgcaca 668
||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||| |
Sbjct: 736 tagcagaagctcctagtctgtgttcctggcttctggacagtcagggcttcaccacgtatg 677
Query: 669 gcctgagcaatgaagttgctaacaacacg-gccatcgtcaatgttcatccttggtccata 727
|| |||||||||||||| ||||||||||| |||||| |||||||||||||| ||||||||
Sbjct: 676 gcttgagcaatgaagttactaacaacacgngccatcatcaatgttcatcctaggtccata 617
Query: 728 ggtgttgaaaatcctggcaattcggatttcaatgccatgctgcctgtgatagtcgaacat 787
||||||||||||||||||||| ||||| |||||||| ||||||||||| |||||||||||
Sbjct: 616 ggtgttgaaaatcctggcaatacggatctcaatgccgtgctgcctgtggtagtcgaacat 557
Query: 788 cagcgtctctgctacacgcttaccctcatcataacagctcctgactccaattgggttaac 847
||| ||||| |||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 556 cagtgtctcagctacacgcttaccctcatcgtagcagctcctgactccaattgggttaac 497
Query: 848 attgccccagtaggcctcggtttgaggatgctcaagcggatcaccataaacttcagatgt 907
|||||||||||||||||| || |||||||||||||| |||||||||||||||||||| ||
Sbjct: 496 attgccccagtaggcctccgtctgaggatgctcaagaggatcaccataaacttcagaggt 437
Query: 908 tgatgtcaacaaaatcctagctccaactctctttgcaaggcccagcatgttcagggtacc 967
|| |||||||| || ||||||||||||||||||||||| || |||||||||| ||| ||
Sbjct: 436 cgaagtcaacaatattctagctccaactctctttgcaagtccaagcatgttcaaggtccc 377
Query: 968 aataacatttgtcttgatggtcttaacaggattgtgcttgtagaagattggtgaagcagg 1027
||| ||||| |||||||||||||| ||||| ||||||||||||||||||||||| |||||
Sbjct: 376 aatgacattcgtcttgatggtcttgacagggttgtgcttgtagaagattggtgaggcagg 317
Query: 1028 gcaagcaaggtgatagatttggtcaacctccacaagaagcggctcggtgacatcatgacg 1087
||||||||||||||||||||||||||||||||| || || || ||||||||||| |||||
Sbjct: 316 gcaagcaaggtgatagatttggtcaacctccacgagcagtggttcggtgacatcgtgacg 257
Query: 1088 gatgagctcaaatcttgggtgtccgatccacttcttcaggttatcttttgaaccagtgaa 1147
||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct: 256 gatgagctcaaatcttgggtggccgatccacttcttcaggttgtcttttgaaccagtgaa 197
Query: 1148 aaagttatcagcaacaatgacctcgtgcttctcgttctccatgagcttgtccacgaggtg 1207
|||||| ||||||||||||||||||| |||||||||||||||||||||||| ||||||||
Sbjct: 196 aaagttgtcagcaacaatgacctcgttcttctcgttctccatgagcttgtcgacgaggtg 137
Query: 1208 cgagccgatgaagcccgccccaccagtgaccaggatccgcaggttagcctggaagaactt 1267
||||||||||||||| || || || |||||||||||||||| ||| ||||||||||||||
Sbjct: 136 cgagccgatgaagccagctccgccggtgaccaggatccgcatgttggcctggaagaactt 77
Query: 1268 ggagaagcggaggggcgacggggtcggcggcgggcgggtgg 1308
||||||||||| ||| || || || ||||||||||| ||||
Sbjct: 76 ggagaagcggatgggggagggcgtgggcggcgggcgcgtgg 36
>gb|BF260651.2|BF260651 HVSMEf0022J07f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0022J07f, mRNA sequence
Length = 803
Score = 856 bits (432), Expect = 0.0
Identities = 692/779 (88%)
Strand = Plus / Minus
Query: 330 cgctcccggaaatcatcctccatgagcaccaagccgtccttcaggacgatcttgggctcc 389
||||||||||| | |||| |||||||| ||||||||| | || |||| ||||| |||
Sbjct: 781 cgctcccggaagttgtccttcatgagcaacaagccgtcatgtagaacgactttggggtcc 722
Query: 390 caccctagaacttcctttgccttggtgatgtccggcttcctctggcggggatcatcagga 449
|| | ||||| || |||||||| || ||||| |||||||||||||| || |||||||||
Sbjct: 721 cagtcaagaacctcttttgcctttgttatgtcaggcttcctctggcgagggtcatcagga 662
Query: 450 gtgttctcggtcatcgtcactgttatatctgggttaatcaactccttcacattctcagca 509
|||||||| |||||||||||||| | |||||||| |||||||| ||||| || ||||||
Sbjct: 661 gtgttctcagtcatcgtcactgtcacctctgggttgatcaactctttcacgttttcagca 602
Query: 510 agttccagcatggtgaattcacctgggttccccaagttaatcggcccagtgttgtttcca 569
|||||||||||||| |||||||||||||||| | |||||| || |||||||||| ||||
Sbjct: 601 agttccagcatggtagattcacctgggttcccaatgttaatgggtccagtgttgtctcca 542
Query: 570 ttcatcagtctaataagaccatcaaccatatcggcgacatagcagaagctcctagtctgt 629
|||||||| | |||||||||| |||||||| || || |||||||||||| ||||||||
Sbjct: 541 ttcatcagcttcataagaccattgaccatatcagcaacgtagcagaagctcntagtctgt 482
Query: 630 gttcctggcttctggacagtaaggggttcgccacgcacagcctgagcaatgaagttgcta 689
|||||||||||||||||||| |||| ||| ||||| | || |||||||||||||| |||
Sbjct: 481 gttcctggcttctggacagtcagggcttcaccacgtatggcatgagcaatgaagttacta 422
Query: 690 acaacacggccatcgtcaatgttcatccttggtccataggtgttgaaaatcctggcaatt 749
|||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 421 acaacacggccatcatcaatgttcatcctaggtccataggtgttgaaaatcctggcaata 362
Query: 750 cggatttcaatgccatgctgcctgtgatagtcgaacatcagcgtctctgctacacgctta 809
||||| |||||||| ||||||||||| |||||||||||||| ||||| ||||||||||||
Sbjct: 361 cggatctcaatgccgtgctgcctgtggtagtcgaacatcagtgtctcagctacacgctta 302
Query: 810 ccctcatcataacagctcctgactccaattgggttaacattgccccagtaggcctcggtt 869
|||||||| || ||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 301 ccctcatcgtagcagctcctgactccaattgggttaacattgccccagtaggcgtccgtc 242
Query: 870 tgaggatgctcaagcggatcaccataaacttcagatgttgatgtcaacaaaatcctagct 929
|||||||||||||| |||||||||||||||||||| || || |||||||| || ||||||
Sbjct: 241 tgaggatgctcaagaggatcaccataaacttcagaggtcgaagtcaacaatattctagct 182
Query: 930 ccaactctctttgcaaggcccagcatgttcagggtaccaataacatttgtcttgatggtc 989
||||||||||||||||| || |||||||||| ||| ||||| ||||| ||||||||||||
Sbjct: 181 ccaactctctttgcaagtccaagcatgttcaaggtcccaatgacattcgtcttgatggtc 122
Query: 990 ttaacaggattgtgcttgtagaagattggtgaagcagggcaagcaaggtgatagatttgg 1049
|| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 121 ttgacagggttgtgcttgtagaagattggtgaggcagggcaagcaaggtgatagatttgg 62
Query: 1050 tcaacctccacaagaagcggctcggtgacatcatgacggatgagctcaaatcttgggtg 1108
||||||||||| || || || ||||||||||| ||||||||||||||||||||||||||
Sbjct: 61 tcaacctccacgagcagtggttcggtgacatcgtgacggatgagctcaaatcttgggtg 3
>gb|BQ472535.1|BQ472535 HB09E05T BC Hordeum vulgare subsp. vulgare cDNA clone HB09E05
5-PRIME, mRNA sequence
Length = 632
Score = 852 bits (430), Expect = 0.0
Identities = 562/606 (92%)
Strand = Plus / Minus
Query: 673 gagcaatgaagttgctaacaacacggccatcgtcaatgttcatccttggtccataggtgt 732
||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||||
Sbjct: 632 gagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtccataggtgt 573
Query: 733 tgaaaatcctggcaattcggatttcaatgccatgctgcctgtgatagtcgaacatcagcg 792
|||||||||||||||| ||||| |||||||| ||||||||||| |||||||||||||| |
Sbjct: 572 tgaaaatcctggcaatacggatctcaatgccgtgctgcctgtggtagtcgaacatcagtg 513
Query: 793 tctctgctacacgcttaccctcatcataacagctcctgactccaattgggttaacattgc 852
|||| |||||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 512 tctcagctacacgcttaccctcatcgtagcagctcctgactccaattgggttaacattgc 453
Query: 853 cccagtaggcctcggtttgaggatgctcaagcggatcaccataaacttcagatgttgatg 912
||||||||||||| || |||||||||||||| |||||||||||||||||||| || || |
Sbjct: 452 cccagtaggcctccgtctgaggatgctcaagaggatcaccataaacttcagaggtcgaag 393
Query: 913 tcaacaaaatcctagctccaactctctttgcaaggcccagcatgttcagggtaccaataa 972
||||||| || ||||||||||||||||||||||| || |||||||||| ||| ||||| |
Sbjct: 392 tcaacaatattctagctccaactctctttgcaagtccaagcatgttcaaggtcccaatga 333
Query: 973 catttgtcttgatggtcttaacaggattgtgcttgtagaagattggtgaagcagggcaag 1032
|||| |||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 332 cattcgtcttgatggtcttgacagggttgtgcttgtagaagattggtgaggcagggcaag 273
Query: 1033 caaggtgatagatttggtcaacctccacaagaagcggctcggtgacatcatgacggatga 1092
|||||||||||||||||||||||||||| || || || ||||||||||| ||||||||||
Sbjct: 272 caaggtgatagatttggtcaacctccacgagcagtggttcggtgacatcgtgacggatga 213
Query: 1093 gctcaaatcttgggtgtccgatccacttcttcaggttatcttttgaaccagtgaaaaagt 1152
|||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 212 gctcaaatcttgggtggccgatccacttcttcaggttgtcttttgaaccagtgaaaaagt 153
Query: 1153 tatcagcaacaatgacctcgtgcttctcgttctccatgagcttgtccacgaggtgcgagc 1212
| ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||
Sbjct: 152 tgtcagcaacaatgacctcgttcttctcgttctccatgagcttgtcgacgaggtgcgagc 93
Query: 1213 cgatgaagcccgccccaccagtgaccaggatccgcaggttagcctggaagaacttggaga 1272
|||||||||| || || || |||||||||||||||| ||| |||||||||||||||||||
Sbjct: 92 cgatgaagccagctccgccggtgaccaggatccgcatgttggcctggaagaacttggaga 33
Query: 1273 agcgga 1278
||||||
Sbjct: 32 agcgga 27
>gb|AV913736.1|AV913736 AV913736 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags23b18 5', mRNA sequence
Length = 660
Score = 844 bits (426), Expect = 0.0
Identities = 600/658 (91%)
Strand = Plus / Minus
Query: 441 tcatcaggagtgttctcggtcatcgtcactgttatatctgggttaatcaactccttcaca 500
||||||||||||||||| |||||||||||||| | |||||||| ||||||||||||||
Sbjct: 658 tcatcaggagtgttctcagtcatcgtcactgtcacctctgggttgatcaactccttcacg 599
Query: 501 ttctcagcaagttccagcatggtgaattcacctgggttccccaagttaatcggcccagtg 560
||||||||||||||||||||||||||||||||||||||||| | |||||| || ||||||
Sbjct: 598 ttctcagcaagttccagcatggtgaattcacctgggttcccaatgttaatgggtccagtg 539
Query: 561 ttgtttccattcatcagtctaataagaccatcaaccatatcggcgacatagcagaagctc 620
|||| |||||||||||| | |||||||||| |||||||| || || ||||||||||||
Sbjct: 538 ttgtctccattcatcagcttcataagaccattgaccatatcagcaacgtagcagaagctc 479
Query: 621 ctagtctgtgttcctggcttctggacagtaaggggttcgccacgcacagcctgagcaatg 680
||||||||||||||||||||||||||||| |||| ||| ||||| | ||||||||||||
Sbjct: 478 ctagtctgtgttcctggcttctggacagtcagggcttcaccacgtatggcctgagcaatg 419
Query: 681 aagttgctaacaacacggccatcgtcaatgttcatccttggtccataggtgttgaaaatc 740
||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 418 aagttactaacaacacggccatcatcaatgttcatcctaggtccataggtgttgaaaatc 359
Query: 741 ctggcaattcggatttcaatgccatgctgcctgtgatagtcgaacatcagcgtctctgct 800
|||||||| ||||| |||||||| ||||||||||| |||||||||||||| ||||| |||
Sbjct: 358 ctggcaatacggatctcaatgccgtgctgcctgtggtagtcgaacatcagtgtctcagct 299
Query: 801 acacgcttaccctcatcataacagctcctgactccaattgggttaacattgccccagtag 860
||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 298 acacgcttaccctcatcgtagcagctcctgactccaattgggttaacattgccccagtag 239
Query: 861 gcctcggtttgaggatgctcaagcggatcaccataaacttcagatgttgatgtcaacaaa 920
||||| || |||||||||||||| |||||||||||||||||||| || || ||||||||
Sbjct: 238 gcctccgtctgaggatgctcaagaggatcaccataaacttcagaggtcgaagtcaacaat 179
Query: 921 atcctagctccaactctctttgcaaggcccagcatgttcagggtaccaataacatttgtc 980
|| ||||||||||||||||||||||| || |||||||||| ||| ||||| ||||| |||
Sbjct: 178 attctagctccaactctctttgcaagtccaagcatgttcaaggtcccaatgacattcgtc 119
Query: 981 ttgatggtcttaacaggattgtgcttgtagaagattggtgaagcagggcaagcaaggtga 1040
||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 118 ttgatggtcttgacagggttgtgcttgtagaagattggtgaggcagggcaagcaaggtga 59
Query: 1041 tagatttggtcaacctccacaagaagcggctcggtgacatcatgacggatgagctcaa 1098
|||||||||||||||||||| || || || ||||||||||| ||||||||||||||||
Sbjct: 58 tagatttggtcaacctccacgagcagtggttcggtgacatcgtgacggatgagctcaa 1
>gb|AV915529.1|AV915529 AV915529 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags14p07 5', mRNA sequence
Length = 645
Score = 842 bits (425), Expect = 0.0
Identities = 581/633 (91%)
Strand = Plus / Minus
Query: 555 ccagtgttgtttccattcatcagtctaataagaccatcaaccatatcggcgacatagcag 614
|||||||||| |||||||||||| | |||||||||| |||||||| || || ||||||
Sbjct: 645 ccagtgttgtctccattcatcagcttcataagaccattgaccatatcagcaacgtagcag 586
Query: 615 aagctcctagtctgtgttcctggcttctggacagtaaggggttcgccacgcacagcctga 674
||||||||||||||||||||||||||||||||||| |||| ||| ||||| | ||||||
Sbjct: 585 aagctcctagtctgtgttcctggcttctggacagtcagggcttcaccacgtatggcctga 526
Query: 675 gcaatgaagttgctaacaacacggccatcgtcaatgttcatccttggtccataggtgttg 734
||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 525 gcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtccataggtgttg 466
Query: 735 aaaatcctggcaattcggatttcaatgccatgctgcctgtgatagtcgaacatcagcgtc 794
|||||||||||||| ||||| |||||||| ||||||||||| |||||||||||||| |||
Sbjct: 465 aaaatcctggcaatacggatctcaatgccgtgctgcctgtggtagtcgaacatcagtgtc 406
Query: 795 tctgctacacgcttaccctcatcataacagctcctgactccaattgggttaacattgccc 854
|| |||||||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 405 tcagctacacgcttaccctcatcgtagcagctcctgactccaattgggttaacattgccc 346
Query: 855 cagtaggcctcggtttgaggatgctcaagcggatcaccataaacttcagatgttgatgtc 914
||||||||||| || |||||||||||||| |||||||||||||||||||| || || |||
Sbjct: 345 cagtaggcctccgtctgaggatgctcaagaggatcaccataaacttcagaggtcgaagtc 286
Query: 915 aacaaaatcctagctccaactctctttgcaaggcccagcatgttcagggtaccaataaca 974
||||| || ||||||||||||||||||||||| || |||||||||| ||| ||||| |||
Sbjct: 285 aacaatattctagctccaactctctttgcaagtccaagcatgttcaaggtcccaatgaca 226
Query: 975 tttgtcttgatggtcttaacaggattgtgcttgtagaagattggtgaagcagggcaagca 1034
|| |||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 225 ttcgtcttgatggtcttgacagggttgtgcttgtagaagattggtgaggcagggcaagca 166
Query: 1035 aggtgatagatttggtcaacctccacaagaagcggctcggtgacatcatgacggatgagc 1094
|||||||||||||||||||||||||| || || || ||||||||||| ||||||||||||
Sbjct: 165 aggtgatagatttggtcaacctccacgagcagtggttcggtgacatcgtgacggatgagc 106
Query: 1095 tcaaatcttgggtgtccgatccacttcttcaggttatcttttgaaccagtgaaaaagtta 1154
|||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 105 tcaaatcttgggtggccgatccacttcttcaggttgtcttttgaaccagtgaaaaagttg 46
Query: 1155 tcagcaacaatgacctcgtgcttctcgttctcc 1187
||||||||||||||||||| |||||||||||||
Sbjct: 45 tcagcaacaatgacctcgttcttctcgttctcc 13
>gb|BU968354.1|BU968354 HB07E05r BC Hordeum vulgare subsp. vulgare cDNA clone HB07E05
5-PRIME, mRNA sequence
Length = 633
Score = 839 bits (423), Expect = 0.0
Identities = 562/607 (92%), Gaps = 1/607 (0%)
Strand = Plus / Minus
Query: 673 gagcaatgaagttgctaacaacacgg-ccatcgtcaatgttcatccttggtccataggtg 731
||||||||||||| |||||||||||| ||||| |||||||||||||| ||||||||||||
Sbjct: 633 gagcaatgaagttactaacaacacgggccatcatcaatgttcatcctaggtccataggtg 574
Query: 732 ttgaaaatcctggcaattcggatttcaatgccatgctgcctgtgatagtcgaacatcagc 791
||||||||||||||||| ||||| |||||||| ||||||||||| ||||||||||||||
Sbjct: 573 ttgaaaatcctggcaatacggatctcaatgccgtgctgcctgtggtagtcgaacatcagt 514
Query: 792 gtctctgctacacgcttaccctcatcataacagctcctgactccaattgggttaacattg 851
||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 513 gtctcagctacacgcttaccctcatcgtagcagctcctgactccaattgggttaacattg 454
Query: 852 ccccagtaggcctcggtttgaggatgctcaagcggatcaccataaacttcagatgttgat 911
|||||||||||||| || |||||||||||||| |||||||||||||||||||| || ||
Sbjct: 453 ccccagtaggcctccgtctgaggatgctcaagaggatcaccataaacttcagaggtcgaa 394
Query: 912 gtcaacaaaatcctagctccaactctctttgcaaggcccagcatgttcagggtaccaata 971
|||||||| || ||||||||||||||||||||||| || |||||||||| ||| |||||
Sbjct: 393 gtcaacaatattctagctccaactctctttgcaagtccaagcatgttcaaggtcccaatg 334
Query: 972 acatttgtcttgatggtcttaacaggattgtgcttgtagaagattggtgaagcagggcaa 1031
||||| |||||||||||||| ||||| ||||||||||||||||||||||| |||||||||
Sbjct: 333 acattcgtcttgatggtcttgacagggttgtgcttgtagaagattggtgaggcagggcaa 274
Query: 1032 gcaaggtgatagatttggtcaacctccacaagaagcggctcggtgacatcatgacggatg 1091
||||||||||||||||||||||||||||| || || || ||||||||||| |||||||||
Sbjct: 273 gcaaggtgatagatttggtcaacctccacgagcagtggttcggtgacatcgtgacggatg 214
Query: 1092 agctcaaatcttgggtgtccgatccacttcttcaggttatcttttgaaccagtgaaaaag 1151
||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct: 213 agctcaaatcttgggtggccgatccacttcttcaggttgtcttttgaaccagtgaaaaag 154
Query: 1152 ttatcagcaacaatgacctcgtgcttctcgttctccatgagcttgtccacgaggtgcgag 1211
|| ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 153 ttgtcagcaacaatgacctcgttcttctcgttctccatgagcttgtcgacgaggtgcgag 94
Query: 1212 ccgatgaagcccgccccaccagtgaccaggatccgcaggttagcctggaagaacttggag 1271
||||||||||| || || || |||||||||||||||| ||| ||||||||||||||||||
Sbjct: 93 ccgatgaagccagctccgccggtgaccaggatccgcatgttggcctggaagaacttggag 34
Query: 1272 aagcgga 1278
|||||||
Sbjct: 33 aagcgga 27
>gb|BU970369.1|BU970369 HB14G11r BC Hordeum vulgare subsp. vulgare cDNA clone HB14G11
5-PRIME, mRNA sequence
Length = 683
Score = 819 bits (413), Expect = 0.0
Identities = 560/609 (91%)
Strand = Plus / Minus
Query: 700 catcgtcaatgttcatccttggtccataggtgttgaaaatcctggcaattcggatttcaa 759
|||| |||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 683 catcatcaatgttcatcctaggtccataggtgttgaaaatcctggcaatacggatctcaa 624
Query: 760 tgccatgctgcctgtgatagtcgaacatcagcgtctctgctacacgcttaccctcatcat 819
|||| ||||||||||| |||||||||||||| ||||| |||||||||||||||||||| |
Sbjct: 623 tgccgtgctgcctgtggtagtcgaacatcagtgtctcagctacacgcttaccctcatcgt 564
Query: 820 aacagctcctgactccaattgggttaacattgccccagtaggcctcggtttgaggatgct 879
| |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 563 agcagctcctgactccaattgggttaacattgccccagtaggcctccgtctgaggatgct 504
Query: 880 caagcggatcaccataaacttcagatgttgatgtcaacaaaatcctagctccaactctct 939
|||| |||||||||||||||||||| || || |||||||| || ||||||||||||||||
Sbjct: 503 caagaggatcaccataaacttcagaggtcgaagtcaacaatattctagctccaactctct 444
Query: 940 ttgcaaggcccagcatgttcagggtaccaataacatttgtcttgatggtcttaacaggat 999
||||||| || |||||||||| ||| ||||| ||||| |||||||||||||| ||||| |
Sbjct: 443 ttgcaagtccaagcatgttcaaggtcccaatgacattcgtcttgatggtcttgacagggt 384
Query: 1000 tgtgcttgtagaagattggtgaagcagggcaagcaaggtgatagatttggtcaacctcca 1059
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 383 tgtgcttgtagaagattggtgaggcagggcaagcaaggtgatagatttggtcaacctcca 324
Query: 1060 caagaagcggctcggtgacatcatgacggatgagctcaaatcttgggtgtccgatccact 1119
| || || || ||||||||||| |||||||||||||||||||||||||| ||||||||||
Sbjct: 323 cgagcagtggttcggtgacatcgtgacggatgagctcaaatcttgggtggccgatccact 264
Query: 1120 tcttcaggttatcttttgaaccagtgaaaaagttatcagcaacaatgacctcgtgcttct 1179
|||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 263 tcttcaggttgtcttttgaaccagtgaaaaagttgtcagcaacaatgacctcgttcttct 204
Query: 1180 cgttctccatgagcttgtccacgaggtgcgagccgatgaagcccgccccaccagtgacca 1239
||||||||||||||||||| ||||||||||||||||||||||| || || || |||||||
Sbjct: 203 cgttctccatgagcttgtcgacgaggtgcgagccgatgaagccagctccgccggtgacca 144
Query: 1240 ggatccgcaggttagcctggaagaacttggagaagcggaggggcgacggggtcggcggcg 1299
||||||||| ||| ||||||||||||||||||||||||| ||| || || || |||||||
Sbjct: 143 ggatccgcatgttggcctggaagaacttggagaagcggatgggggagggcgtgggcggcg 84
Query: 1300 ggcgggtgg 1308
|||| ||||
Sbjct: 83 ggcgcgtgg 75
>gb|AL503252.1|AL503252 AL503252 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW01F04T 5', mRNA sequence
Length = 700
Score = 811 bits (409), Expect = 0.0
Identities = 563/613 (91%), Gaps = 1/613 (0%)
Strand = Plus / Minus
Query: 697 ggccatcgtcaatgttcatccttggtccataggtgttgaaaatcctggcaattcggattt 756
||||||| |||||||||||||| ||||||||||||||||||||||||||||| ||||| |
Sbjct: 700 ggccatcatcaatgttcatcctaggtccataggtgttgaaaatcctggcaatacggatct 641
Query: 757 caatgcca-tgctgcctgtgatagtcgaacatcagcgtctctgctacacgcttaccctca 815
||||||| ||||||||||| |||||||||||||| ||||| ||||||||||||||||||
Sbjct: 640 caatgcccgtgctgcctgtggtagtcgaacatcagtgtctcagctacacgcttaccctca 581
Query: 816 tcataacagctcctgactccaattgggttaacattgccccagtaggcctcggtttgagga 875
|| || |||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 580 tcgtagcagctcctgactccaattgggttaacattgccccagtaggcctccgtctgagga 521
Query: 876 tgctcaagcggatcaccataaacttcagatgttgatgtcaacaaaatcctagctccaact 935
|||||||| |||||||||||||||||||| || || |||||||| || ||||||||||||
Sbjct: 520 tgctcaagaggatcaccataaacttcagaggtcgaagtcaacaatattctagctccaact 461
Query: 936 ctctttgcaaggcccagcatgttcagggtaccaataacatttgtcttgatggtcttaaca 995
||||||||||| || |||||||||| ||| ||||| ||||| |||||||||||||| |||
Sbjct: 460 ctctttgcaagtccaagcatgttcaaggtcccaatgacattcgtcttgatggtcttgaca 401
Query: 996 ggattgtgcttgtagaagattggtgaagcagggcaagcaaggtgatagatttggtcaacc 1055
|| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 400 gggttgtgcttgtagaagattggtgaggcagggcaagcaaggtgatagatttggtcaacc 341
Query: 1056 tccacaagaagcggctcggtgacatcatgacggatgagctcaaatcttgggtgtccgatc 1115
||||| || || || ||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 340 tccacgagcagtggttcggtgacatcgtgacggatgagctcaaatcttgggtggccgatc 281
Query: 1116 cacttcttcaggttatcttttgaaccagtgaaaaagttatcagcaacaatgacctcgtgc 1175
|||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |
Sbjct: 280 cacttcttcaggttgtcttttgaaccagtgaaaaagttgtcagcaacaatgacctcgttc 221
Query: 1176 ttctcgttctccatgagcttgtccacgaggtgcgagccgatgaagcccgccccaccagtg 1235
||||||||||||||||||||||| ||||||||||||||||||||||| || || || |||
Sbjct: 220 ttctcgttctccatgagcttgtcgacgaggtgcgagccgatgaagccagctccgccggtg 161
Query: 1236 accaggatccgcaggttagcctggaagaacttggagaagcggaggggcgacggggtcggc 1295
||||||||||||| ||| ||||||||||||||||||||||||| ||| || || || |||
Sbjct: 160 accaggatccgcatgttggcctggaagaacttggagaagcggatgggggagggcgtgggc 101
Query: 1296 ggcgggcgggtgg 1308
|||||||| ||||
Sbjct: 100 ggcgggcgcgtgg 88
>gb|BJ450393.1|BJ450393 BJ450393 K. Sato unpublished cDNA library, cv. Akashinriki vegetative
stage leaves Hordeum vulgare subsp. vulgare cDNA clone
baak29f24 5', mRNA sequence
Length = 637
Score = 811 bits (409), Expect = 0.0
Identities = 567/617 (91%), Gaps = 2/617 (0%)
Strand = Plus / Minus
Query: 687 ctaacaacacggccatcgtcaatgttcatccttggtccataggtgttgaaaatcctggca 746
||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct: 633 ctaacaacacggccatcatcaatgttcatcctaggtccataggtgttgaaaatcctggca 574
Query: 747 attcggatttcaatgccatgctgcctgtgatagtcgaacatcagcgtctctgctacacgc 806
|| ||||| |||||||| ||||||||||| |||||||||||||| ||||| |||||||||
Sbjct: 573 atacggatctcaatgccgtgctgcctgtggtagtcgaacatcagtgtctcagctacacgc 514
Query: 807 ttaccctcatcataacagctcctgactccaattgggttaacattgccccagtaggcctcg 866
||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 ttaccctcatcgtagcagctcctgactccaattgggttaacattgccccagtaggcctcc 454
Query: 867 gtttgaggatgctcaagcggatcaccataaacttcagatgttgatgtcaacaaaatccta 926
|| |||||||||||||| |||||||||||||||||||| || || |||||||| || |||
Sbjct: 453 gtctgaggatgctcaagaggatcaccataaacttcagaggtcgaagtcaacaatattcta 394
Query: 927 gctccaactctctttgcaaggcccagcatgttcagggtaccaataacatttgtcttgatg 986
|||||||||||||||||||| || |||||||||| ||| ||||| ||||| |||||||||
Sbjct: 393 gctccaactctctttgcaagtccaagcatgttcaaggtcccaatgacattcgtcttgatg 334
Query: 987 gtcttaacaggattgtgcttgtagaagattggtgaagcagggcaagcaaggtgatagatt 1046
||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 333 gtcttgacagggttgtgcttgtagaagattggtgaggcagggcaagcaaggtgatagatt 274
Query: 1047 tggtcaacctccacaagaagcggctcggtgacatcatgacggatgagctcaaatcttggg 1106
|||||||||||||| || || || ||||||||||| ||||||||||||||||||||||||
Sbjct: 273 tggtcaacctccacgagcagtggttcggtgacatcgtgacggatgagctcaaatcttggg 214
Query: 1107 tgtccgatccacttcttcaggttatcttttgaaccagtgaaaaagttatcagcaacaatg 1166
|| |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 213 tggccgatccacttcttcaggttgtcttttgaaccagtgaaaaagttgtcagcaacaatg 154
Query: 1167 acctcgtgcttctcgttctccatgagcttgtccacgaggtgcgagccgatgaagcccgcc 1226
||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 153 acctcgttcttctcgttctccatgagcttgtcgacgaggtgcgagccgatgaagccagct 94
Query: 1227 ccaccagtgaccaggatccgcaggttagcctggaagaacttggagaagcggaggggcgac 1286
|| || |||||||||||||||| ||| ||| |||||||| |||||||||||| ||| ||
Sbjct: 93 ccgccggtgaccaggatccgcatgttggcc-ggaagaac-tggagaagcggatgggggag 36
Query: 1287 ggggtcggcggcgggcg 1303
|| || |||||||||||
Sbjct: 35 ggcgtgggcggcgggcg 19
>gb|BU994833.1|BU994833 HM08F16r HM Hordeum vulgare subsp. vulgare cDNA clone HM08F16
5-PRIME, mRNA sequence
Length = 645
Score = 809 bits (408), Expect = 0.0
Identities = 580/636 (91%), Gaps = 1/636 (0%)
Strand = Plus / Minus
Query: 514 ccagcatggtgaattcacctgggttccccaagttaatcggcccagtgttgtttccattca 573
|||||||||||||||||||||||||||| | |||||| || |||||||||| ||||||||
Sbjct: 645 ccagcatggtgaattcacctgggttcccaatgttaatgggtccagtgttgtctccattca 586
Query: 574 tcagtctaataagaccatcaaccatatcggcgacatagcagaagctcctagtctgtgttc 633
|||| | |||||||||| |||||||| || || |||||||||||||||||||||||||
Sbjct: 585 tcagcttcataagaccattgaccatatcagcaacgtagcagaagctcctagtctgtgttc 526
Query: 634 ctggcttctggacagtaaggggttcgccacgcacagcctgagcaatgaagttgctaacaa 693
|||||||||||||||| |||| ||| ||||| | ||||||||||||||||| |||||||
Sbjct: 525 ctggcttctggacagtcagggcttcaccacgtatggcctgagcaatgaagttactaacaa 466
Query: 694 cacggccatcgtcaatgttcatccttggtccataggtgttgaaaatcctggcaattcgga 753
|||||||||| |||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 465 cacggccatcatcaatgttcatcctaggtccataggtgttgaaaatcctggcaatacgga 406
Query: 754 tttcaatgccatgctgcctgtgatagtcgaacatcagcgtctctgctacacgcttaccct 813
| |||||||| ||||||||||| |||||||||||||| ||||| ||||||||||||||||
Sbjct: 405 tctcaatgccgtgctgcctgtggtagtcgaacatcagtgtctcagctacacgcttaccct 346
Query: 814 catcataacagctcctgactccaattgggttaacattgccccagtaggcctcggtttgag 873
|||| || |||||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct: 345 catcgtagcagctcctgactccaattgggttaacattgccccagtaggcctccgtctgag 286
Query: 874 gatgctcaagcggatcaccataaacttcagatgttgatgtcaacaaaatcctagctccaa 933
|||||||||| |||||||||||||||||||| || || |||||||| || ||||||||||
Sbjct: 285 gatgctcaagaggatcaccataaacttcagaggtcgaagtcaacaatattctagctccaa 226
Query: 934 ctctctttgcaaggcccagcatgttcagggtaccaataacatttgtcttgatggtcttaa 993
||||||||||||| || |||||||||| ||| ||||| ||||| |||||||||||||| |
Sbjct: 225 ctctctttgcaagtccaagcatgttcaaggtcccaatgacattcgtcttgatggtcttga 166
Query: 994 caggattgtgcttgtagaagattggtgaagcagggcaagcaaggtgatagatttggtcaa 1053
|||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 165 cagggttgtgcttgtagaagattggtgaggcagggcaagcaaggtgatagatttggtcaa 106
Query: 1054 cctccacaagaagcggctcggtgacatcatgacggatgagctcaaatcttgggtgtccga 1113
||||||| || || || ||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 105 cctccacgagcagtggttcggtgacatcgtgacggatgagctcaaatcttgggtggccga 46
Query: 1114 tccacttcttcaggttatcttttgaaccagtgaaaa 1149
|||||||||||||||| |||||| ||||||| ||||
Sbjct: 45 tccacttcttcaggttgtctttt-aaccagtaaaaa 11
>gb|AV913569.1|AV913569 AV913569 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags22i15 5', mRNA sequence
Length = 582
Score = 805 bits (406), Expect = 0.0
Identities = 538/582 (92%)
Strand = Plus / Minus
Query: 641 ctggacagtaaggggttcgccacgcacagcctgagcaatgaagttgctaacaacacggcc 700
||||||||| |||| ||| ||||| | ||||||||||||||||| ||||||||||||||
Sbjct: 582 ctggacagtcagggcttcaccacgtatggcctgagcaatgaagttactaacaacacggcc 523
Query: 701 atcgtcaatgttcatccttggtccataggtgttgaaaatcctggcaattcggatttcaat 760
||| |||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||
Sbjct: 522 atcatcaatgttcatcctaggtccataggtgttgaaaatcctggcaatacggatctcaat 463
Query: 761 gccatgctgcctgtgatagtcgaacatcagcgtctctgctacacgcttaccctcatcata 820
||| ||||||||||| |||||||||||||| ||||| |||||||||||||||||||| ||
Sbjct: 462 gccgtgctgcctgtggtagtcgaacatcagtgtctcagctacacgcttaccctcatcgta 403
Query: 821 acagctcctgactccaattgggttaacattgccccagtaggcctcggtttgaggatgctc 880
|||||||||||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct: 402 gcagctcctgactccaattgggttaacattgccccagtaggcctccgtctgaggatgctc 343
Query: 881 aagcggatcaccataaacttcagatgttgatgtcaacaaaatcctagctccaactctctt 940
||| |||||||||||||||||||| || || |||||||| || |||||||||||||||||
Sbjct: 342 aagaggatcaccataaacttcagaggtcgaagtcaacaatattctagctccaactctctt 283
Query: 941 tgcaaggcccagcatgttcagggtaccaataacatttgtcttgatggtcttaacaggatt 1000
|||||| || |||||||||| ||| ||||| ||||| |||||||||||||| ||||| ||
Sbjct: 282 tgcaagtccaagcatgttcaaggtcccaatgacattcgtcttgatggtcttgacagggtt 223
Query: 1001 gtgcttgtagaagattggtgaagcagggcaagcaaggtgatagatttggtcaacctccac 1060
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 222 gtgcttgtagaagattggtgaggcagggcaagcaaggtgatagatttggtcaacctccac 163
Query: 1061 aagaagcggctcggtgacatcatgacggatgagctcaaatcttgggtgtccgatccactt 1120
|| || || ||||||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct: 162 gagcagtggttcggtgacatcgtgacggatgagctcaaatcttgggtggccgatccactt 103
Query: 1121 cttcaggttatcttttgaaccagtgaaaaagttatcagcaacaatgacctcgtgcttctc 1180
||||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||
Sbjct: 102 cttcaggttgtcttttgaaccagtgaaaaagttgtcagcaacaatgacctcgttcttctc 43
Query: 1181 gttctccatgagcttgtccacgaggtgcgagccgatgaagcc 1222
|||||||||||||||||| |||||||||||||||||||||||
Sbjct: 42 gttctccatgagcttgtcgacgaggtgcgagccgatgaagcc 1
>gb|BJ464957.1|BJ464957 BJ464957 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags36l20 5', mRNA sequence
Length = 630
Score = 805 bits (406), Expect = 0.0
Identities = 568/622 (91%)
Strand = Plus / Minus
Query: 479 tgggttaatcaactccttcacattctcagcaagttccagcatggtgaattcacctgggtt 538
|||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 630 tgggttgatcaactccttcacgttctcagcaagttccagcatggtgaattcacctgggtt 571
Query: 539 ccccaagttaatcggcccagtgttgtttccattcatcagtctaataagaccatcaaccat 598
||| | |||||| || |||||||||| |||||||||||| | |||||||||| |||||
Sbjct: 570 cccaatgttaatgggtccagtgttgtctccattcatcagcttcataagaccattgaccat 511
Query: 599 atcggcgacatagcagaagctcctagtctgtgttcctggcttctggacagtaaggggttc 658
||| || || ||||||||||||||||||||||||||||||||||||||||| |||| |||
Sbjct: 510 atcagcaacgtagcagaagctcctagtctgtgttcctggcttctggacagtcagggcttc 451
Query: 659 gccacgcacagcctgagcaatgaagttgctaacaacacggccatcgtcaatgttcatcct 718
||||| | ||||||||||||||||| ||||||||||||||||| ||||||||||||||
Sbjct: 450 accacgtatggcctgagcaatgaagttactaacaacacggccatcatcaatgttcatcct 391
Query: 719 tggtccataggtgttgaaaatcctggcaattcggatttcaatgccatgctgcctgtgata 778
||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||| ||
Sbjct: 390 aggtccataggtgttgaaaatcctggcaatacggatctcaatgccgtgctgcctgtggta 331
Query: 779 gtcgaacatcagcgtctctgctacacgcttaccctcatcataacagctcctgactccaat 838
|||||||||||| ||||| |||||||||||||||||||| || |||||||||||||||||
Sbjct: 330 gtcgaacatcagtgtctcagctacacgcttaccctcatcgtagcagctcctgactccaat 271
Query: 839 tgggttaacattgccccagtaggcctcggtttgaggatgctcaagcggatcaccataaac 898
||||||||||||||||||||||||||| || |||||||||||||| ||||||||||||||
Sbjct: 270 tgggttaacattgccccagtaggcctccgtctgaggatgctcaagaggatcaccataaac 211
Query: 899 ttcagatgttgatgtcaacaaaatcctagctccaactctctttgcaaggcccagcatgtt 958
|||||| || || |||||||| || ||||||||||||||||||||||| || ||||||||
Sbjct: 210 ttcagaggtcgaagtcaacaatattctagctccaactctctttgcaagtccaagcatgtt 151
Query: 959 cagggtaccaataacatttgtcttgatggtcttaacaggattgtgcttgtagaagattgg 1018
|| ||| ||||| ||||| |||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 150 caaggtcccaatgacattcgtcttgatggtcttgacagggttgtgcttgtagaagattgg 91
Query: 1019 tgaagcagggcaagcaaggtgatagatttggtcaacctccacaagaagcggctcggtgac 1078
||| |||||||||||||||||||||||||||||||||||||| || || || ||||||||
Sbjct: 90 tgaggcagggcaagcaaggtgatagatttggtcaacctccacgagcagtggttcggtgac 31
Query: 1079 atcatgacggatgagctcaaat 1100
||| ||||||||||||||||||
Sbjct: 30 atcgtgacggatgagctcaaat 9
>gb|AL506691.1|AL506691 AL506691 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY03P08T 5',
mRNA sequence
Length = 700
Score = 801 bits (404), Expect = 0.0
Identities = 550/599 (91%)
Strand = Plus / Minus
Query: 710 gttcatccttggtccataggtgttgaaaatcctggcaattcggatttcaatgccatgctg 769
||||||| | ||||||||||||||||||||||||||||| ||||| |||||||| |||||
Sbjct: 700 gttcatcntaggtccataggtgttgaaaatcctggcaatacggatctcaatgccgtgctg 641
Query: 770 cctgtgatagtcgaacatcagcgtctctgctacacgcttaccctcatcataacagctcct 829
|||||| |||||||||||||| ||||| |||||||||||||||||||| || ||||||||
Sbjct: 640 cctgtggtagtcgaacatcagtgtctcagctacacgcttaccctcatcgtagcagctcct 581
Query: 830 gactccaattgggttaacattgccccagtaggcctcggtttgaggatgctcaagcggatc 889
|||||||||||||||||||||||||||||||||||| || |||||||||||||| |||||
Sbjct: 580 gactccaattgggttaacattgccccagtaggcctccgtctgaggatgctcaagaggatc 521
Query: 890 accataaacttcagatgttgatgtcaacaaaatcctagctccaactctctttgcaaggcc 949
||||||||||||||| || || |||||||| || ||||||||||||||||||||||| ||
Sbjct: 520 accataaacttcagaggtcgaagtcaacaatattctagctccaactctctttgcaagtcc 461
Query: 950 cagcatgttcagggtaccaataacatttgtcttgatggtcttaacaggattgtgcttgta 1009
|||||||||| ||| ||||| ||||| |||||||||||||| ||||| |||||||||||
Sbjct: 460 aagcatgttcaaggtcccaatgacattcgtcttgatggtcttgacagggttgtgcttgta 401
Query: 1010 gaagattggtgaagcagggcaagcaaggtgatagatttggtcaacctccacaagaagcgg 1069
|||||||||||| |||||||||||||||||||||||||||||||||||||| || || ||
Sbjct: 400 gaagattggtgaggcagggcaagcaaggtgatagatttggtcaacctccacgagcagtgg 341
Query: 1070 ctcggtgacatcatgacggatgagctcaaatcttgggtgtccgatccacttcttcaggtt 1129
||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 340 ttcggtgacatcgtgacggatgagctcaaatcttgggtggccgatccacttcttcaggtt 281
Query: 1130 atcttttgaaccagtgaaaaagttatcagcaacaatgacctcgtgcttctcgttctccat 1189
||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||
Sbjct: 280 gtcttttgaaccagtgaaaaagttgtcagcaacaatgacctcgttcttctcgttctccat 221
Query: 1190 gagcttgtccacgaggtgcgagccgatgaagcccgccccaccagtgaccaggatccgcag 1249
||||||||| ||||||||||||||||||||||| || || || ||||||||||||||||
Sbjct: 220 gagcttgtcgacgaggtgcgagccgatgaagccagctccgccggtgaccaggatccgcat 161
Query: 1250 gttagcctggaagaacttggagaagcggaggggcgacggggtcggcggcgggcgggtgg 1308
||| ||||||||||||||||||||||||| ||| || || || ||||||||||| ||||
Sbjct: 160 gttggcctggaagaacttggagaagcggatgggggagggcgtgggcggcgggcgcgtgg 102
>gb|BJ465124.1|BJ465124 BJ465124 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags37p12 5', mRNA sequence
Length = 640
Score = 801 bits (404), Expect = 0.0
Identities = 563/616 (91%)
Strand = Plus / Minus
Query: 486 atcaactccttcacattctcagcaagttccagcatggtgaattcacctgggttccccaag 545
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 637 atcaactccttcacgttctcagcaagttccagcatggtgaattcacctgggttcccaatg 578
Query: 546 ttaatcggcccagtgttgtttccattcatcagtctaataagaccatcaaccatatcggcg 605
||||| || |||||||||| |||||||||||| | |||||||||| |||||||| ||
Sbjct: 577 ttaatgggtccagtgttgtctccattcatcagcttcataagaccattgaccatatcagca 518
Query: 606 acatagcagaagctcctagtctgtgttcctggcttctggacagtaaggggttcgccacgc 665
|| ||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||
Sbjct: 517 acgtagcagaagctcctagtctgtgttcctggcttctggacagtcagggcttcaccacgt 458
Query: 666 acagcctgagcaatgaagttgctaacaacacggccatcgtcaatgttcatccttggtcca 725
| ||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||
Sbjct: 457 atggcctgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtcca 398
Query: 726 taggtgttgaaaatcctggcaattcggatttcaatgccatgctgcctgtgatagtcgaac 785
||||||||||||||||||||||| ||||| |||||||| ||||||||||| |||||||||
Sbjct: 397 taggtgttgaaaatcctggcaatacggatctcaatgccgtgctgcctgtggtagtcgaac 338
Query: 786 atcagcgtctctgctacacgcttaccctcatcataacagctcctgactccaattgggtta 845
||||| ||||| |||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 337 atcagtgtctcagctacacgcttaccctcatcgtagcagctcctgactccaattgggtta 278
Query: 846 acattgccccagtaggcctcggtttgaggatgctcaagcggatcaccataaacttcagat 905
|||||||||||||||||||| || |||||||||||||| ||||||||||||||||||||
Sbjct: 277 acattgccccagtaggcctccgtctgaggatgctcaagaggatcaccataaacttcagag 218
Query: 906 gttgatgtcaacaaaatcctagctccaactctctttgcaaggcccagcatgttcagggta 965
|| || |||||||| || ||||||||||||||||||||||| || |||||||||| |||
Sbjct: 217 gtcgaagtcaacaatattctagctccaactctctttgcaagtccaagcatgttcaaggtc 158
Query: 966 ccaataacatttgtcttgatggtcttaacaggattgtgcttgtagaagattggtgaagca 1025
||||| ||||| |||||||||||||| ||||| ||||||||||||||||||||||| |||
Sbjct: 157 ccaatgacattcgtcttgatggtcttgacagggttgtgcttgtagaagattggtgaggca 98
Query: 1026 gggcaagcaaggtgatagatttggtcaacctccacaagaagcggctcggtgacatcatga 1085
||||||||||||||||||||||||||||||||||| || || || ||||||||||| |||
Sbjct: 97 gggcaagcaaggtgatagatttggtcaacctccacgagcagtggttcggtgacatcgtga 38
Query: 1086 cggatgagctcaaatc 1101
||||||||||||||||
Sbjct: 37 cggatgagctcaaatc 22
>gb|BE454127.2|BE454127 HVSMEh0080M10f Hordeum vulgare 5-45 DAP spike EST library HVcDNA0009
(5 to 45 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEh0080M10f, mRNA sequence
Length = 716
Score = 799 bits (403), Expect = 0.0
Identities = 547/595 (91%)
Strand = Plus / Minus
Query: 714 atccttggtccataggtgttgaaaatcctggcaattcggatttcaatgccatgctgcctg 773
||||| ||||||||||||||||||||||||||||| ||||| |||||||| |||||||||
Sbjct: 715 atcctaggtccataggtgttgaaaatcctggcaatacggatctcaatgccgtgctgcctg 656
Query: 774 tgatagtcgaacatcagcgtctctgctacacgcttaccctcatcataacagctcctgact 833
|| |||||||||||||| ||||| |||||||||||||||||||| || ||||||||||||
Sbjct: 655 tggtagtcgaacatcagtgtctcagctacacgcttaccctcatcgtagcagctcctgact 596
Query: 834 ccaattgggttaacattgccccagtaggcctcggtttgaggatgctcaagcggatcacca 893
|||||||||||||||||||||||||||||||| || |||||||||||||| |||||||||
Sbjct: 595 ccaattgggttaacattgccccagtaggcctccgtctgaggatgctcaagaggatcacca 536
Query: 894 taaacttcagatgttgatgtcaacaaaatcctagctccaactctctttgcaaggcccagc 953
||||||||||| || || |||||||| || ||||||||||||||||||||||| || |||
Sbjct: 535 taaacttcagaggtcgaagtcaacaatattctagctccaactctctttgcaagtccaagc 476
Query: 954 atgttcagggtaccaataacatttgtcttgatggtcttaacaggattgtgcttgtagaag 1013
||||||| ||| ||||| ||||| |||||||||||||| ||||| |||||||||||||||
Sbjct: 475 atgttcaaggtcccaatgacattcgtcttgatggtcttgacagggttgtgcttgtagaag 416
Query: 1014 attggtgaagcagggcaagcaaggtgatagatttggtcaacctccacaagaagcggctcg 1073
|||||||| |||||||||||||||||||||||||||||||||||||| || || || |||
Sbjct: 415 attggtgaggcagggcaagcaaggtgatagatttggtcaacctccacgagcagtggttcg 356
Query: 1074 gtgacatcatgacggatgagctcaaatcttgggtgtccgatccacttcttcaggttatct 1133
|||||||| |||||||||||||||||||||||||| |||||||||||||||||||| |||
Sbjct: 355 gtgacatcgtgacggatgagctcaaatcttgggtggccgatccacttcttcaggttgtct 296
Query: 1134 tttgaaccagtgaaaaagttatcagcaacaatgacctcgtgcttctcgttctccatgagc 1193
|||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||
Sbjct: 295 tttgaaccagtgaaaaagttgtcagcaacaatgacctcgttcttctcgttctccatgagc 236
Query: 1194 ttgtccacgaggtgcgagccgatgaagcccgccccaccagtgaccaggatccgcaggtta 1253
||||| ||||||||||||||||||||||| || || || |||||||||||||||| |||
Sbjct: 235 ttgtcgacgaggtgcgagccgatgaagccagctccgccggtgaccaggatccgcatgttg 176
Query: 1254 gcctggaagaacttggagaagcggaggggcgacggggtcggcggcgggcgggtgg 1308
||||||||||||||||||||||||| ||| || || || ||||||||||| ||||
Sbjct: 175 gcctggaagaacttggagaagcggatgggggagggcgtgggcggcgggcgcgtgg 121
>gb|BU973256.1|BU973256 HB24E24r BC Hordeum vulgare subsp. vulgare cDNA clone HB24E24
5-PRIME, mRNA sequence
Length = 586
Score = 799 bits (403), Expect = 0.0
Identities = 517/555 (93%)
Strand = Plus / Minus
Query: 669 gcctgagcaatgaagttgctaacaacacggccatcgtcaatgttcatccttggtccatag 728
||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 563 gcctgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtccatag 504
Query: 729 gtgttgaaaatcctggcaattcggatttcaatgccatgctgcctgtgatagtcgaacatc 788
|||||||||||||||||||| ||||| |||||||| ||||||||||| ||||||||||||
Sbjct: 503 gtgttgaaaatcctggcaatacggatctcaatgccgtgctgcctgtggtagtcgaacatc 444
Query: 789 agcgtctctgctacacgcttaccctcatcataacagctcctgactccaattgggttaaca 848
|| ||||| |||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 443 agtgtctcagctacacgcttaccctcatcgtagcagctcctgactccaattgggttaaca 384
Query: 849 ttgccccagtaggcctcggtttgaggatgctcaagcggatcaccataaacttcagatgtt 908
||||||||||||||||| || |||||||||||||| |||||||||||||||||||| ||
Sbjct: 383 ttgccccagtaggcctccgtctgaggatgctcaagaggatcaccataaacttcagaggtc 324
Query: 909 gatgtcaacaaaatcctagctccaactctctttgcaaggcccagcatgttcagggtacca 968
|| |||||||| || ||||||||||||||||||||||| || |||||||||| ||| |||
Sbjct: 323 gaagtcaacaatattctagctccaactctctttgcaagtccaagcatgttcaaggtccca 264
Query: 969 ataacatttgtcttgatggtcttaacaggattgtgcttgtagaagattggtgaagcaggg 1028
|| ||||| |||||||||||||| ||||| ||||||||||||||||||||||| ||||||
Sbjct: 263 atgacattcgtcttgatggtcttgacagggttgtgcttgtagaagattggtgaggcaggg 204
Query: 1029 caagcaaggtgatagatttggtcaacctccacaagaagcggctcggtgacatcatgacgg 1088
|||||||||||||||||||||||||||||||| || || || ||||||||||| ||||||
Sbjct: 203 caagcaaggtgatagatttggtcaacctccacgagcagtggttcggtgacatcgtgacgg 144
Query: 1089 atgagctcaaatcttgggtgtccgatccacttcttcaggttatcttttgaaccagtgaaa 1148
|||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 143 atgagctcaaatcttgggtggccgatccacttcttcaggttgtcttttgaaccagtgaaa 84
Query: 1149 aagttatcagcaacaatgacctcgtgcttctcgttctccatgagcttgtccacgaggtgc 1208
||||| ||||||||||||||||||| |||||||||||||||||||||||| |||||||||
Sbjct: 83 aagttgtcagcaacaatgacctcgttcttctcgttctccatgagcttgtcgacgaggtgc 24
Query: 1209 gagccgatgaagccc 1223
|||||||||||||||
Sbjct: 23 gagccgatgaagccc 9
>gb|CK123742.1|CK123742 BES1824105d21 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010D215 5-PRIME, mRNA sequence
Length = 746
Score = 799 bits (403), Expect = 0.0
Identities = 564/615 (91%), Gaps = 2/615 (0%)
Strand = Plus / Minus
Query: 696 cggccatcgtcaatgttcatccttggtccataggtgttgaaaatcctggcaattcggatt 755
|||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 746 cggccatcatcaatgttcatcctaggtccataggtgttgaaaatcctggcaatacggatc 687
Query: 756 tcaatgccatgctgcctgtgatagtcgaacatcagcgtctctgctacacgcttaccctca 815
|||||||| ||||||||||| |||||||||||||| ||||| ||||||||||||||||||
Sbjct: 686 tcaatgccgtgctgcctgtggtagtcgaacatcagtgtctcagctacacgcttaccctca 627
Query: 816 tcataacagctcctgactccaattgggttaacattgccccagtaggcctcg-gtttgagg 874
|| || |||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct: 626 tcgtagcagctcctgactccaattgggttaacattgccccagtaggcctcccgtctgagg 567
Query: 875 atgctcaagcggatcaccataaactt-cagatgttgatgtcaacaaaatcctagctccaa 933
||||||||| |||||||||||||||| |||| || || |||||||| || ||||||||||
Sbjct: 566 atgctcaagaggatcaccataaactttcagaggtcgaagtcaacaatattctagctccaa 507
Query: 934 ctctctttgcaaggcccagcatgttcagggtaccaataacatttgtcttgatggtcttaa 993
||||||||||||| || |||||||||| ||| ||||| ||||| |||||||||||||| |
Sbjct: 506 ctctctttgcaagtccaagcatgttcaaggtcccaatgacattcgtcttgatggtcttga 447
Query: 994 caggattgtgcttgtagaagattggtgaagcagggcaagcaaggtgatagatttggtcaa 1053
|||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 446 cagggttgtgcttgtagaagattggtgaggcagggcaagcaaggtgatagatttggtcaa 387
Query: 1054 cctccacaagaagcggctcggtgacatcatgacggatgagctcaaatcttgggtgtccga 1113
||||||| || || || ||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 386 cctccacgagcagtggttcggtgacatcgtgacggatgagctcaaatcttgggtggccga 327
Query: 1114 tccacttcttcaggttatcttttgaaccagtgaaaaagttatcagcaacaatgacctcgt 1173
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 326 tccacttcttcaggttgtcttttgaaccagtgaaaaagttgtcagcaacaatgacctcgt 267
Query: 1174 gcttctcgttctccatgagcttgtccacgaggtgcgagccgatgaagcccgccccaccag 1233
|||||||||||||||||||||||| ||||||||||||||||||||||| || || || |
Sbjct: 266 tcttctcgttctccatgagcttgtcgacgaggtgcgagccgatgaagccagctccgccgg 207
Query: 1234 tgaccaggatccgcaggttagcctggaagaacttggagaagcggaggggcgacggggtcg 1293
||||||||||||||| ||| ||||||||||||||||||||||||| ||| || || || |
Sbjct: 206 tgaccaggatccgcatgttggcctggaagaacttggagaagcggatgggggagggcgtgg 147
Query: 1294 gcggcgggcgggtgg 1308
|||||||||| ||||
Sbjct: 146 gcggcgggcgcgtgg 132
>gb|BJ463694.1|BJ463694 BJ463694 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags30b17 5', mRNA sequence
Length = 595
Score = 797 bits (402), Expect = 0.0
Identities = 516/554 (93%)
Strand = Plus / Minus
Query: 669 gcctgagcaatgaagttgctaacaacacggccatcgtcaatgttcatccttggtccatag 728
||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 571 gcctgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtccatag 512
Query: 729 gtgttgaaaatcctggcaattcggatttcaatgccatgctgcctgtgatagtcgaacatc 788
|||||||||||||||||||| ||||| |||||||| ||||||||||| ||||||||||||
Sbjct: 511 gtgttgaaaatcctggcaatacggatctcaatgccgtgctgcctgtggtagtcgaacatc 452
Query: 789 agcgtctctgctacacgcttaccctcatcataacagctcctgactccaattgggttaaca 848
|| ||||| |||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 451 agtgtctcagctacacgcttaccctcatcgtagcagctcctgactccaattgggttaaca 392
Query: 849 ttgccccagtaggcctcggtttgaggatgctcaagcggatcaccataaacttcagatgtt 908
||||||||||||||||| || |||||||||||||| |||||||||||||||||||| ||
Sbjct: 391 ttgccccagtaggcctccgtctgaggatgctcaagaggatcaccataaacttcagaggtc 332
Query: 909 gatgtcaacaaaatcctagctccaactctctttgcaaggcccagcatgttcagggtacca 968
|| |||||||| || ||||||||||||||||||||||| || |||||||||| ||| |||
Sbjct: 331 gaagtcaacaatattctagctccaactctctttgcaagtccaagcatgttcaaggtccca 272
Query: 969 ataacatttgtcttgatggtcttaacaggattgtgcttgtagaagattggtgaagcaggg 1028
|| ||||| |||||||||||||| ||||| ||||||||||||||||||||||| ||||||
Sbjct: 271 atgacattcgtcttgatggtcttgacagggttgtgcttgtagaagattggtgaggcaggg 212
Query: 1029 caagcaaggtgatagatttggtcaacctccacaagaagcggctcggtgacatcatgacgg 1088
|||||||||||||||||||||||||||||||| || || || ||||||||||| ||||||
Sbjct: 211 caagcaaggtgatagatttggtcaacctccacgagcagtggttcggtgacatcgtgacgg 152
Query: 1089 atgagctcaaatcttgggtgtccgatccacttcttcaggttatcttttgaaccagtgaaa 1148
|||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 151 atgagctcaaatcttgggtggccgatccacttcttcaggttgtcttttgaaccagtgaaa 92
Query: 1149 aagttatcagcaacaatgacctcgtgcttctcgttctccatgagcttgtccacgaggtgc 1208
||||| ||||||||||||||||||| |||||||||||||||||||||||| |||||||||
Sbjct: 91 aagttgtcagcaacaatgacctcgttcttctcgttctccatgagcttgtcgacgaggtgc 32
Query: 1209 gagccgatgaagcc 1222
||||||||||||||
Sbjct: 31 gagccgatgaagcc 18
>gb|BM101485.2|BM101485 EBpi01_SQ003_P22_R pistil, 1 DPA, no treatment, cv Optic, EBpi01
Hordeum vulgare subsp. vulgare cDNA clone
EBpi01_SQ003_P22 5', mRNA sequence
Length = 615
Score = 787 bits (397), Expect = 0.0
Identities = 552/604 (91%)
Strand = Plus / Minus
Query: 705 tcaatgttcatccttggtccataggtgttgaaaatcctggcaattcggatttcaatgcca 764
|||||||||||| | ||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 611 tcaatgttcatcgtaggtccataggtgttgaaaatcctggcaatacggatctcaatgccg 552
Query: 765 tgctgcctgtgatagtcgaacatcagcgtctctgctacacgcttaccctcatcataacag 824
||||||||||| |||||||||||||| ||||| |||||||||||||| |||| || |||
Sbjct: 551 tgctgcctgtggtagtcgaacatcagtgtctcagctacacgcttaccttcatngtagcag 492
Query: 825 ctcctgactccaattgggttaacattgccccagtaggcctcggtttgaggatgctcaagc 884
||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 491 ctcctgactccaattgggttaacattgccccagtaggcctctgtctgaggatgctcaaga 432
Query: 885 ggatcaccataaacttcagatgttgatgtcaacaaaatcctagctccaactctctttgca 944
|||||||||||||||||||| || || |||||||| || |||||||||||||||||||||
Sbjct: 431 ggatcaccataaacttcagaggtcgaagtcaacaatattctagctccaactctctttgca 372
Query: 945 aggcccagcatgttcagggtaccaataacatttgtcttgatggtcttaacaggattgtgc 1004
|| || |||||||||| ||| ||||| ||||| |||||||||||||| ||||| ||||||
Sbjct: 371 agtccaagcatgttcaaggtcccaatgacattcgtcttgatggtcttgacagggttgtgc 312
Query: 1005 ttgtagaagattggtgaagcagggcaagcaaggtgatagatttggtcaacctccacaaga 1064
||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| ||
Sbjct: 311 ttgtagaagattggtgaggcagggcaagcaaggtgatagatttggtcaccctccacgagc 252
Query: 1065 agcggctcggtgacatcatgacggatgagctcaaatcttgggtgtccgatccacttcttc 1124
|| || ||||||||||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct: 251 agtggttcggtgacatcgtgacggatgagctcaaatcttgggtggccgatccacttcttc 192
Query: 1125 aggttatcttttgaaccagtgaaaaagttatcagcaacaatgacctcgtgcttctcgttc 1184
||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||
Sbjct: 191 aggttgtcttttgaaccagtgaaaaagttgtcagcaacaatgacctcgttcttctcgttc 132
Query: 1185 tccatgagcttgtccacgaggtgcgagccgatgaagcccgccccaccagtgaccaggatc 1244
|||||||||||||| ||||||||||||||||||||||| || || || ||||||||||||
Sbjct: 131 tccatgagcttgtcgacgaggtgcgagccgatgaagccagctccgccggtgaccaggatc 72
Query: 1245 cgcaggttagcctggaagaacttggagaagcggaggggcgacggggtcggcggcgggcgg 1304
|||| ||| ||||||||||||||||||||||||| ||| || || || |||||||||||
Sbjct: 71 cgcatgttggcctggaagaacttggagaagcggatgggggagggcgtgggcggcgggcgc 12
Query: 1305 gtgg 1308
||||
Sbjct: 11 gtgg 8
>gb|BI959464.1|BI959464 HVSMEn0019M08f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0019M08f,
mRNA sequence
Length = 654
Score = 785 bits (396), Expect = 0.0
Identities = 540/588 (91%)
Strand = Plus / Minus
Query: 721 gtccataggtgttgaaaatcctggcaattcggatttcaatgccatgctgcctgtgatagt 780
|||||||||||||||||||||||||||| ||||| |||||||| ||||||||||| ||||
Sbjct: 642 gtccataggtgttgaaaatcctggcaatacggatctcaatgccgtgctgcctgtggtagt 583
Query: 781 cgaacatcagcgtctctgctacacgcttaccctcatcataacagctcctgactccaattg 840
|||||||||| ||||| |||||||||||||||||||| || |||||||||||||||||||
Sbjct: 582 cgaacatcagtgtctcagctacacgcttaccctcatcgtagcagctcctgactccaattg 523
Query: 841 ggttaacattgccccagtaggcctcggtttgaggatgctcaagcggatcaccataaactt 900
||||||||||||||||||||||||| || |||||||||||||| ||||||||||||||||
Sbjct: 522 ggttaacattgccccagtaggcctccgtctgaggatgctcaagaggatcaccataaactt 463
Query: 901 cagatgttgatgtcaacaaaatcctagctccaactctctttgcaaggcccagcatgttca 960
|||| || || |||||||| || ||||||||||||||||||||||| || ||||||||||
Sbjct: 462 cagaggtcgaagtcaacaatattctagctccaactctctttgcaagtccaagcatgttca 403
Query: 961 gggtaccaataacatttgtcttgatggtcttaacaggattgtgcttgtagaagattggtg 1020
||| ||||| |||| |||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 402 aggtcccaatggcattcgtcttgatggtcttgacagggttgtgcttgtagaagattggtg 343
Query: 1021 aagcagggcaagcaaggtgatagatttggtcaacctccacaagaagcggctcggtgacat 1080
| |||||||||||||||||||||||||||||||||||||| || || || ||||||||||
Sbjct: 342 aggcagggcaagcaaggtgatagatttggtcaacctccacgagcagtggttcggtgacat 283
Query: 1081 catgacggatgagctcaaatcttgggtgtccgatccacttcttcaggttatcttttgaac 1140
| |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||
Sbjct: 282 cgtgacggatgagctcaaatcttgggtggccgatccacttcttcaggttgtcttttgaac 223
Query: 1141 cagtgaaaaagttatcagcaacaatgacctcgtgcttctcgttctccatgagcttgtcca 1200
||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct: 222 cagtgaaaaagttgtcagcaacaatgacctcgttcttctcgttctccatgagcttgtcga 163
Query: 1201 cgaggtgcgagccgatgaagcccgccccaccagtgaccaggatccgcaggttagcctgga 1260
|||||||||||||||||||||| || || || |||||||||||||||| ||| |||||||
Sbjct: 162 cgaggtgcgagccgatgaagccagctccgccggtgaccaggatccgcatgttggcctgga 103
Query: 1261 agaacttggagaagcggaggggcgacggggtcggcggcgggcgggtgg 1308
|||||||||||||||||| ||| || || || ||||||||||| ||||
Sbjct: 102 agaacttggagaagcggatgggggagggcgtgggcggcgggcgcgtgg 55
>gb|AV912858.1|AV912858 AV912858 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags10j24 5', mRNA sequence
Length = 599
Score = 779 bits (393), Expect = 0.0
Identities = 536/581 (92%), Gaps = 2/581 (0%)
Strand = Plus / Minus
Query: 699 ccatcgtcaatgttcatccttggtccataggtgttgaaaatcctggcaattcggatttca 758
||||| |||||||||||||| ||||||||||||||||||||||||||||| ||||| |||
Sbjct: 599 ccatcatcaatgttcatcctaggtccataggtgttgaaaatcctggcaatacggatctca 540
Query: 759 atgccatgctgcctgtgatagtcgaacatca-gcgtctctgctacacgcttaccctcatc 817
||||| ||||||||||| ||||||||||||| | ||||| ||||||||||||||||||||
Sbjct: 539 atgccgtgctgcctgtggtagtcgaacatcaagtgtctcagctacacgcttaccctcatc 480
Query: 818 ataacagctcctgactccaattgggttaacattgccccagtaggcctcggtttgaggatg 877
|| |||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 479 gtagcagctcctgactccaattgggttaacattgccccagtaggcctccgtctgaggatg 420
Query: 878 ctcaagcggatcaccataaacttcagatgttgatgtcaacaaaatcctagctccaactct 937
|||||| |||||||||||||||||||| || || |||||||| || ||||||||||||||
Sbjct: 419 ctcaagaggatcaccataaacttcagaggtcgaagtcaacaatattctagctccaactct 360
Query: 938 ctttgcaaggcccagcatgttcagggtaccaataacatttgtcttgatggtcttaacagg 997
||||||||| || |||||||||| ||| ||||| ||||| |||||||||||||| |||||
Sbjct: 359 ctttgcaagtccaagcatgttcaaggtcccaatgacattcgtcttgatggtcttgacagg 300
Query: 998 attgtgcttgtagaagattggtgaagcagggcaagcaaggtgatagatttggtcaacctc 1057
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 299 gttgtgcttgtagaagattggtgaggcagggcaagcaaggtgatagatttggtcaacctc 240
Query: 1058 cacaagaagcggctcggtgacatcatgacggatgagctcaaatcttgggtgtccgatcca 1117
||| || || || ||||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 239 cacgagcagtggttcggtgacatcgtgacggatgagctcaaatcttgggtggccgatcca 180
Query: 1118 cttcttcaggttatcttttgaaccagtgaaaaagttatcagcaacaatgacctcgtgctt 1177
|||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||
Sbjct: 179 cttcttcaggttgtcttttgaaccagtgaaaaagttgtcagcaacaatgacctcgttctt 120
Query: 1178 ctcgttctccatgagcttgtccacgaggtgcgagccgatgaagcccgccccaccagtgac 1237
||||||||||||||||||||| ||||||||||||||||||||||| || || || |||||
Sbjct: 119 ctcgttctccatgagcttgtcgacgaggtgcgagccgatgaagccagctccgccggtgac 60
Query: 1238 caggatccgcaggttagcctggaagaacttggagaagcgga 1278
||||||||||| ||| ||| |||||||||||||||||||||
Sbjct: 59 caggatccgcatgttggcc-ggaagaacttggagaagcgga 20
>gb|AL506538.1|AL506538 AL506538 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY03H14T 5',
mRNA sequence
Length = 700
Score = 777 bits (392), Expect = 0.0
Identities = 540/588 (91%), Gaps = 1/588 (0%)
Strand = Plus / Minus
Query: 722 tccataggtgttgaaaatcctggcaattcggatttcaatgccatgctgcctgtgatagtc 781
||||||||||||||||||||||||||| ||||| |||||||| ||||||||||| |||||
Sbjct: 700 tccataggtgttgaaaatcctggcaatacggatctcaatgccgtgctgcctgtggtagtc 641
Query: 782 gaacatcagcgtctctgctacacg-cttaccctcatcataacagctcctgactccaattg 840
||||||||| ||||| |||||||| |||||||||||| || |||||||||||||||||||
Sbjct: 640 gaacatcagtgtctcagctacacggcttaccctcatcgtagcagctcctgactccaattg 581
Query: 841 ggttaacattgccccagtaggcctcggtttgaggatgctcaagcggatcaccataaactt 900
||||||||||||||||||||||||| || |||||||||||||| ||||||||||||||||
Sbjct: 580 ggttaacattgccccagtaggcctccgtctgaggatgctcaagaggatcaccataaactt 521
Query: 901 cagatgttgatgtcaacaaaatcctagctccaactctctttgcaaggcccagcatgttca 960
|||| || || |||||||| || ||||||||||||||||||||||| || ||||||||||
Sbjct: 520 cagaggtcgaagtcaacaatattctagctccaactctctttgcaagtccaagcatgttca 461
Query: 961 gggtaccaataacatttgtcttgatggtcttaacaggattgtgcttgtagaagattggtg 1020
||| ||||| ||||| |||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 460 aggtcccaatgacattcgtcttgatggtcttgacagggttgtgcttgtagaagattggtg 401
Query: 1021 aagcagggcaagcaaggtgatagatttggtcaacctccacaagaagcggctcggtgacat 1080
| |||||||||||||||||||||||||||||||||||||| || || || ||||||||||
Sbjct: 400 aggcagggcaagcaaggtgatagatttggtcaacctccacgagcagtggttcggtgacat 341
Query: 1081 catgacggatgagctcaaatcttgggtgtccgatccacttcttcaggttatcttttgaac 1140
| |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||
Sbjct: 340 cgtgacggatgagctcaaatcttgggtggccgatccacttcttcaggttgtcttttgaac 281
Query: 1141 cagtgaaaaagttatcagcaacaatgacctcgtgcttctcgttctccatgagcttgtcca 1200
||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct: 280 cagtgaaaaagttgtcagcaacaatgacctcgttcttctcgttctccatgagcttgtcga 221
Query: 1201 cgaggtgcgagccgatgaagcccgccccaccagtgaccaggatccgcaggttagcctgga 1260
|||||||||||||||||||||| || || || |||||||||||||||| ||| |||||||
Sbjct: 220 cgaggtgcgagccgatgaagccagctccgccggtgaccaggatccgcatgttggcctgga 161
Query: 1261 agaacttggagaagcggaggggcgacggggtcggcggcgggcgggtgg 1308
|||||||||||||||||| ||| || || || ||||||||||| ||||
Sbjct: 160 agaacttggagaagcggatgggggagggcgtgggcggcgggcgcgtgg 113
>gb|AL507716.1|AL507716 AL507716 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY06K11V 5',
mRNA sequence
Length = 700
Score = 773 bits (390), Expect = 0.0
Identities = 538/586 (91%), Gaps = 1/586 (0%)
Strand = Plus / Minus
Query: 724 cataggtgttgaaaatcc-tggcaattcggatttcaatgccatgctgcctgtgatagtcg 782
|||||||||||||||||| ||||||| ||||| |||||||| ||||||||||| ||||||
Sbjct: 700 cataggtgttgaaaatccctggcaatacggatctcaatgccgtgctgcctgtggtagtcg 641
Query: 783 aacatcagcgtctctgctacacgcttaccctcatcataacagctcctgactccaattggg 842
|||||||| ||||| |||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 640 aacatcagtgtctcagctacacgcttaccctcatcgtagcagctcctgactccaattggg 581
Query: 843 ttaacattgccccagtaggcctcggtttgaggatgctcaagcggatcaccataaacttca 902
||||||||||||||||||||||| || |||||||||||||| ||||||||||||||||||
Sbjct: 580 ttaacattgccccagtaggcctccgtctgaggatgctcaagaggatcaccataaacttca 521
Query: 903 gatgttgatgtcaacaaaatcctagctccaactctctttgcaaggcccagcatgttcagg 962
|| || || |||||||| || ||||||||||||||||||||||| || |||||||||| |
Sbjct: 520 gaggtcgaagtcaacaatattctagctccaactctctttgcaagtccaagcatgttcaag 461
Query: 963 gtaccaataacatttgtcttgatggtcttaacaggattgtgcttgtagaagattggtgaa 1022
|| ||||| ||||| |||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 460 gtcccaatgacattcgtcttgatggtcttgacagggttgtgcttgtagaagattggtgag 401
Query: 1023 gcagggcaagcaaggtgatagatttggtcaacctccacaagaagcggctcggtgacatca 1082
|||||||||||||||||||||||||||||||||||||| || || || |||||||||||
Sbjct: 400 gcagggcaagcaaggtgatagatttggtcaacctccacgagcagtggttcggtgacatcg 341
Query: 1083 tgacggatgagctcaaatcttgggtgtccgatccacttcttcaggttatcttttgaacca 1142
|||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 340 tgacggatgagctcaaatcttgggtggccgatccacttcttcaggttgtcttttgaacca 281
Query: 1143 gtgaaaaagttatcagcaacaatgacctcgtgcttctcgttctccatgagcttgtccacg 1202
||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| |||
Sbjct: 280 gtgaaaaagttgtcagcaacaatgacctcgttcttctcgttctccatgagcttgtcgacg 221
Query: 1203 aggtgcgagccgatgaagcccgccccaccagtgaccaggatccgcaggttagcctggaag 1262
|||||||||||||||||||| || || || |||||||||||||||| ||| |||||||||
Sbjct: 220 aggtgcgagccgatgaagccagctccgccggtgaccaggatccgcatgttggcctggaag 161
Query: 1263 aacttggagaagcggaggggcgacggggtcggcggcgggcgggtgg 1308
|||||||||||||||| ||| || || || ||||||||||| ||||
Sbjct: 160 aacttggagaagcggatgggggagggcgtgggcggcgggcgcgtgg 115
>gb|AL506572.1|AL506572 AL506572 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY03J03T 5',
mRNA sequence
Length = 700
Score = 763 bits (385), Expect = 0.0
Identities = 537/585 (91%), Gaps = 2/585 (0%)
Strand = Plus / Minus
Query: 726 taggtgttgaaaatcctggcaattcggatt-tcaatgccatgctgcctgtgatagtcgaa 784
||||||||||||||||||||||| |||||| |||||||| ||||||||||| ||||||||
Sbjct: 700 taggtgttgaaaatcctggcaatacggattctcaatgccgtgctgcctgtggtagtcgaa 641
Query: 785 catcagcgtctct-gctacacgcttaccctcatcataacagctcctgactccaattgggt 843
|||||| ||||| |||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 640 catcagtgtctcaagctacacgcttaccctcatcgtagcagctcctgactccaattgggt 581
Query: 844 taacattgccccagtaggcctcggtttgaggatgctcaagcggatcaccataaacttcag 903
|||||||||||||||||||||| || |||||||||||||| |||||||||||||||||||
Sbjct: 580 taacattgccccagtaggcctccgtctgaggatgctcaagaggatcaccataaacttcag 521
Query: 904 atgttgatgtcaacaaaatcctagctccaactctctttgcaaggcccagcatgttcaggg 963
| || || |||||||| || ||||||||||||||||||||||| || |||||||||| ||
Sbjct: 520 aggtcgaagtcaacaatattctagctccaactctctttgcaagtccaagcatgttcaagg 461
Query: 964 taccaataacatttgtcttgatggtcttaacaggattgtgcttgtagaagattggtgaag 1023
| ||||| ||||| |||||||||||||| ||||| ||||||||||||||||||||||| |
Sbjct: 460 tcccaatgacattcgtcttgatggtcttgacagggttgtgcttgtagaagattggtgagg 401
Query: 1024 cagggcaagcaaggtgatagatttggtcaacctccacaagaagcggctcggtgacatcat 1083
||||||||||||||||||||||||||||||||||||| || || || ||||||||||| |
Sbjct: 400 cagggcaagcaaggtgatagatttggtcaacctccacgagcagtggttcggtgacatcgt 341
Query: 1084 gacggatgagctcaaatcttgggtgtccgatccacttcttcaggttatcttttgaaccag 1143
||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||
Sbjct: 340 gacggatgagctcaaatcttgggtggccgatccacttcttcaggttgtcttttgaaccag 281
Query: 1144 tgaaaaagttatcagcaacaatgacctcgtgcttctcgttctccatgagcttgtccacga 1203
|||||||||| ||||||||||||||||||| |||||||||||||||||||||||| ||||
Sbjct: 280 tgaaaaagttgtcagcaacaatgacctcgttcttctcgttctccatgagcttgtcgacga 221
Query: 1204 ggtgcgagccgatgaagcccgccccaccagtgaccaggatccgcaggttagcctggaaga 1263
||||||||||||||||||| || || || |||||||||||||||| ||| ||||||||||
Sbjct: 220 ggtgcgagccgatgaagccagctccgccggtgaccaggatccgcatgttggcctggaaga 161
Query: 1264 acttggagaagcggaggggcgacggggtcggcggcgggcgggtgg 1308
||||||||||||||| ||| || || || ||||||||||| ||||
Sbjct: 160 acttggagaagcggatgggggagggcgtgggcggcgggcgcgtgg 116
>gb|BJ463235.1|BJ463235 BJ463235 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags26g08 5', mRNA sequence
Length = 559
Score = 763 bits (385), Expect = 0.0
Identities = 514/557 (92%)
Strand = Plus / Minus
Query: 642 tggacagtaaggggttcgccacgcacagcctgagcaatgaagttgctaacaacacggcca 701
|||||||| |||| ||| ||||| | ||||||||||||||||| |||||||||||||||
Sbjct: 559 tggacagtcagggcttcaccacgtatggcctgagcaatgaagttactaacaacacggcca 500
Query: 702 tcgtcaatgttcatccttggtccataggtgttgaaaatcctggcaattcggatttcaatg 761
|| |||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 499 tcatcaatgttcatcctaggtccataggtgttgaaaatcctggcaatacggatctcaatg 440
Query: 762 ccatgctgcctgtgatagtcgaacatcagcgtctctgctacacgcttaccctcatcataa 821
|| ||||||||||| |||||||||||||| ||||| |||||||||||||||||||| ||
Sbjct: 439 ccgtgctgcctgtggtagtcgaacatcagtgtctcagctacacgcttaccctcatcgtag 380
Query: 822 cagctcctgactccaattgggttaacattgccccagtaggcctcggtttgaggatgctca 881
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 379 cagctcctgactccaattgggttaacattgccccagtaggcctccgtctgaggatgctca 320
Query: 882 agcggatcaccataaacttcagatgttgatgtcaacaaaatcctagctccaactctcttt 941
|| |||||||||||||||||||| || || |||||||| || ||||||||||||||||||
Sbjct: 319 agaggatcaccataaacttcagaggtcgaagtcaacaatattctagctccaactctcttt 260
Query: 942 gcaaggcccagcatgttcagggtaccaataacatttgtcttgatggtcttaacaggattg 1001
||||| || |||||||||| ||| ||||| ||||| |||||||||||||| ||||| |||
Sbjct: 259 gcaagtccaagcatgttcaaggtcccaatgacattcgtcttgatggtcttgacagggttg 200
Query: 1002 tgcttgtagaagattggtgaagcagggcaagcaaggtgatagatttggtcaacctccaca 1061
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 199 tgcttgtagaagattggtgaggcagggcaagcaaggtgatagatttggtcaacctccacg 140
Query: 1062 agaagcggctcggtgacatcatgacggatgagctcaaatcttgggtgtccgatccacttc 1121
|| || || ||||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 139 agcagtggttcggtgacatcgtgacggatgagctcaaatcttgggtggccgatccacttc 80
Query: 1122 ttcaggttatcttttgaaccagtgaaaaagttatcagcaacaatgacctcgtgcttctcg 1181
|||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||
Sbjct: 79 ttcaggttgtcttttgaaccagtgaaaaagttgtcagcaacaatgacctcgttcttctcg 20
Query: 1182 ttctccatgagcttgtc 1198
|||||||||||||||||
Sbjct: 19 ttctccatgagcttgtc 3
>gb|AV913652.1|AV913652 AV913652 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags22n04 5', mRNA sequence
Length = 589
Score = 759 bits (383), Expect = 0.0
Identities = 530/575 (92%), Gaps = 3/575 (0%)
Strand = Plus / Minus
Query: 705 tcaatgttcatccttggtccataggtgttgaaaatcctggcaattcggatttcaatgcca 764
|||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 587 tcaatgttcatcctaggtccataggtgttgaaaatcctggcaatacggatctcaatgccg 528
Query: 765 tgctgcctgtgatagtcgaacatca-gcgtctctgctacacgcttaccctcatcataaca 823
||||||||||| ||||||||||||| | ||||| |||||||||||||||||||| || ||
Sbjct: 527 tgctgcctgtggtagtcgaacatcaagtgtctcagctacacgcttaccctcatcgtagca 468
Query: 824 gctcctgactccaattgggttaacattgccccagtaggcctcggtttgaggatgctcaag 883
|||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 467 gctcctgactccaattgggttaacattgccccagtaggcctccgtctgaggatgctcaag 408
Query: 884 cggatcaccataaacttcagatgttgatgtcaacaaaatcctagctccaactctctttgc 943
|||||||||||||||||||| || || |||||||| || ||||||||||||||||||||
Sbjct: 407 aggatcaccataaacttcagaggtcgaagtcaacaatattctagctccaactctctttgc 348
Query: 944 aaggcccagcatgttcagggtaccaataacatttgtcttgatggtcttaacaggattgtg 1003
||| || |||||||||| ||| ||||| ||||| |||||||||||||| ||||| |||||
Sbjct: 347 aagtccaagcatgttcaaggtcccaatgacattcgtcttgatggtcttgacagggttgtg 288
Query: 1004 cttgtagaagattggtgaagcagggcaagcaaggtgatagatttggtcaacctccacaag 1063
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct: 287 cttgtagaagattggtgaggcagggcaagcaaggtgatagatttggtcaacctccacgag 228
Query: 1064 aagcggctcggtgacatcatgacggatgagctcaaatcttgggtgtccgatccacttctt 1123
|| || ||||||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 227 cagtggttcggtgacatcgtgacggatgagctcaaatcttgggtggccgatccacttctt 168
Query: 1124 caggttatcttttgaaccagtgaaaaagttatcagcaacaatgacctcgtgcttctcgtt 1183
|||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||
Sbjct: 167 caggttgtcttttgaaccagtgaaaaagttgtcagcaacaatgacctcgttcttctcgtt 108
Query: 1184 ctccatgagcttgtccacgaggtgcgagccgatgaagcccgccccaccagtgaccaggat 1243
||||||||||||||| ||||||||||||||||||||||| || || || |||||||||||
Sbjct: 107 ctccatgagcttgtcgacgaggtgcgagccgatgaagccagctccgccggtgaccaggat 48
Query: 1244 ccgcaggttagcctggaagaacttggagaagcgga 1278
||||| ||| ||| |||||||| ||||||||||||
Sbjct: 47 ccgcatgttggcc-ggaagaac-tggagaagcgga 15
>gb|BQ472320.1|BQ472320 HB09P05T BC Hordeum vulgare subsp. vulgare cDNA clone HB09P05
5-PRIME, mRNA sequence
Length = 700
Score = 755 bits (381), Expect = 0.0
Identities = 522/569 (91%)
Strand = Plus / Minus
Query: 740 cctggcaattcggatttcaatgccatgctgcctgtgatagtcgaacatcagcgtctctgc 799
||||||||| ||||| |||||||| ||||||||||| |||||||||||||| ||||| ||
Sbjct: 700 cctggcaatacggatctcaatgccgtgctgcctgtggtagtcgaacatcagtgtctcagc 641
Query: 800 tacacgcttaccctcatcataacagctcctgactccaattgggttaacattgccccagta 859
|||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 640 tacacgcttaccctcatcgtagcagctcctgactccaattgggttaacattgccccagta 581
Query: 860 ggcctcggtttgaggatgctcaagcggatcaccataaacttcagatgttgatgtcaacaa 919
|||||| || |||||||||||||| |||||||||||||||||||| || || ||||||||
Sbjct: 580 ggcctccgtctgaggatgctcaagaggatcaccataaacttcagaggtcgaagtcaacaa 521
Query: 920 aatcctagctccaactctctttgcaaggcccagcatgttcagggtaccaataacatttgt 979
|| ||||||||||||||||||||||| || |||||||||| ||| ||||| ||||| ||
Sbjct: 520 tattctagctccaactctctttgcaagtccaagcatgttcaaggtcccaatgacattcgt 461
Query: 980 cttgatggtcttaacaggattgtgcttgtagaagattggtgaagcagggcaagcaaggtg 1039
|||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 460 cttgatggtcttgacagggttgtgcttgtagaagattggtgaggcagggcaagcaaggtg 401
Query: 1040 atagatttggtcaacctccacaagaagcggctcggtgacatcatgacggatgagctcaaa 1099
||||||||||||||||||||| || || || ||||||||||| |||||||||||||||||
Sbjct: 400 atagatttggtcaacctccacgagcagtggttcggtgacatcgtgacggatgagctcaaa 341
Query: 1100 tcttgggtgtccgatccacttcttcaggttatcttttgaaccagtgaaaaagttatcagc 1159
||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct: 340 tcttgggtggccgatccacttcttcaggttgtcttttgaaccagtgaaaaagttgtcagc 281
Query: 1160 aacaatgacctcgtgcttctcgttctccatgagcttgtccacgaggtgcgagccgatgaa 1219
|||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 280 aacaatgacctcgttcttctcgttctccatgagcttgtcgacgaggtgcgagccgatgaa 221
Query: 1220 gcccgccccaccagtgaccaggatccgcaggttagcctggaagaacttggagaagcggag 1279
||| || || || |||||||||||||||| ||| |||||||||||||||||||||||||
Sbjct: 220 gccagctccgccggtgaccaggatccgcatgttggcctggaagaacttggagaagcggat 161
Query: 1280 gggcgacggggtcggcggcgggcgggtgg 1308
||| || || || ||||||||||| ||||
Sbjct: 160 gggggagggcgtgggcggcgggcgcgtgg 132
>gb|BF255870.2|BF255870 HVSMEf0008A22f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0008A22f, mRNA sequence
Length = 871
Score = 747 bits (377), Expect = 0.0
Identities = 563/621 (90%), Gaps = 3/621 (0%)
Strand = Plus / Minus
Query: 691 caacacggccatcgtcaatgttcatccttggtccataggtgttgaaaatcct-ggcaatt 749
|||| |||||||| ||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 747 caacccggccatctacaatgttcatctagggtccataggtgttgaaaatccttggcaata 688
Query: 750 cggatt-tcaatgcca-tgctgcctgtgatagtcgaacatcagcgtctctgctacacgct 807
|||| | ||||| || | ||||||||| |||||||||||||| ||||| ||||||||||
Sbjct: 687 cggaatctcaattcccgtcctgcctgtggtagtcgaacatcagtgtctcagctacacgct 628
Query: 808 taccctcatcataacagctcctgactccaattgggttaacattgccccagtaggcctcgg 867
|||||||||| || |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 627 taccctcatcgtagcagctcctgactccaattgggttaacattgccccagtaggcctccg 568
Query: 868 tttgaggatgctcaagcggatcaccataaacttcagatgttgatgtcaacaaaatcctag 927
| |||||||||||||| |||||||||||||||||||| || || |||||||| || ||||
Sbjct: 567 tctgaggatgctcaagaggatcaccataaacttcagaggtcgaagtcaacaatattctag 508
Query: 928 ctccaactctctttgcaaggcccagcatgttcagggtaccaataacatttgtcttgatgg 987
||||||||||||||||||| || |||||||||| ||| ||||| ||||| ||||||||||
Sbjct: 507 ctccaactctctttgcaagtccaagcatgttcaaggtcccaatgacattcgtcttgatgg 448
Query: 988 tcttaacaggattgtgcttgtagaagattggtgaagcagggcaagcaaggtgatagattt 1047
|||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 447 tcttgacagggttgtgcttgtagaagattggtgaggcagggcaagcaaggtgatagattt 388
Query: 1048 ggtcaacctccacaagaagcggctcggtgacatcatgacggatgagctcaaatcttgggt 1107
||||||||||||| || || || ||||||||||| |||||||||||||||||||||||||
Sbjct: 387 ggtcaacctccacgagcagtggttcggtgacatcgtgacggatgagctcaaatcttgggt 328
Query: 1108 gtccgatccacttcttcaggttatcttttgaaccagtgaaaaagttatcagcaacaatga 1167
| |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||
Sbjct: 327 ggccgatccacttcttcaggttgtcttttgaaccagtgaaaaagttgtcagcaacaatga 268
Query: 1168 cctcgtgcttctcgttctccatgagcttgtccacgaggtgcgagccgatgaagcccgccc 1227
|||||| |||||||||||||||||||||||| ||||||||||||||||||||||| || |
Sbjct: 267 cctcgttcttctcgttctccatgagcttgtcgacgaggtgcgagccgatgaagccagctc 208
Query: 1228 caccagtgaccaggatccgcaggttagcctggaagaacttggagaagcggaggggcgacg 1287
| || |||||||||||||||| ||| ||||||||||||||||||||||||| ||| || |
Sbjct: 207 cgccggtgaccaggatccgcatgttggcctggaagaacttggagaagcggatgggggagg 148
Query: 1288 gggtcggcggcgggcgggtgg 1308
| || ||||||||||| ||||
Sbjct: 147 gcgtgggcggcgggcgcgtgg 127
>gb|BJ454281.1|BJ454281 BJ454281 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak46n15 5', mRNA sequence
Length = 614
Score = 745 bits (376), Expect = 0.0
Identities = 553/612 (90%)
Strand = Plus / Minus
Query: 345 tcctccatgagcaccaagccgtccttcaggacgatcttgggctcccaccctagaacttcc 404
||||||||||||||||||||||| ||||||| |||||||||||| | ||||| |||
Sbjct: 613 tcctccatgagcaccaagccgtcacgtaggacgaccttgggctcccagtcaagaacctcc 554
Query: 405 tttgccttggtgatgtccggcttcctctggcggggatcatcaggagtgttctcggtcatc 464
|||||||| |||||||| |||||||||||||| || ||||||||||||||||| ||||||
Sbjct: 553 tttgcctttgtgatgtcaggcttcctctggcgagggtcatcaggagtgttctcagtcatc 494
Query: 465 gtcactgttatatctgggttaatcaactccttcacattctcagcaagttccagcatggtg 524
|||||||| | |||||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct: 493 gtcactgtcacctctgggttgatcaactccttcacgttctcagcaagttccagcatggtg 434
Query: 525 aattcacctgggttccccaagttaatcggcccagtgttgtttccattcatcagtctaata 584
||||||||||||||||| | |||||| || |||||||||| |||||||||||| | |||
Sbjct: 433 aattcacctgggttcccaatgttaatgggtccagtgttgtctccattcatcagcttcata 374
Query: 585 agaccatcaaccatatcggcgacatagcagaagctcctagtctgtgttcctggcttctgg 644
||||||| |||||||| || || ||||||||||||||||||||||||||||||||||||
Sbjct: 373 agaccattgaccatatcagcaacgtagcagaagctcctagtctgtgttcctggcttctgg 314
Query: 645 acagtaaggggttcgccacgcacagcctgagcaatgaagttgctaacaacacggccatcg 704
||||| |||| ||| ||||| | ||||||||||||||||| |||||||||||||||||
Sbjct: 313 acagtcagggcttcaccacgtatggcctgagcaatgaagttactaacaacacggccatca 254
Query: 705 tcaatgttcatccttggtccataggtgttgaaaatcctggcaattcggatttcaatgcca 764
|||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 253 tcaatgttcatcctaggtccataggtgttgaaaatcctggcaatacggatctcaatgccg 194
Query: 765 tgctgcctgtgatagtcgaacatcagcgtctctgctacacgcttaccctcatcataacag 824
||||||||||| |||||||||||||| ||||| |||||||||||||||||||| || |||
Sbjct: 193 tgctgcctgtggtagtcgaacatcagtgtctcagctacacgcttaccctcatcgtagcag 134
Query: 825 ctcctgactccaattgggttaacattgccccagtaggcctcggtttgaggatgctcaagc 884
||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 133 ctcctgactccaattgggttaacattgccccagtaggcctccgtctgaggatgctcaaga 74
Query: 885 ggatcaccataaacttcagatgttgatgtcaacaaaatcctagctccaactctctttgca 944
|||||||||||||||||||| || || |||||||| || |||||||||||||||||||||
Sbjct: 73 ggatcaccataaacttcagaggtcgaagtcaacaatattctagctccaactctctttgca 14
Query: 945 aggcccagcatg 956
|| || ||||||
Sbjct: 13 agtccaagcatg 2
>gb|BU988522.1|BU988522 HF17O04r HF Hordeum vulgare subsp. vulgare cDNA clone HF17O04
5-PRIME, mRNA sequence
Length = 532
Score = 745 bits (376), Expect = 0.0
Identities = 487/524 (92%)
Strand = Plus / Minus
Query: 700 catcgtcaatgttcatccttggtccataggtgttgaaaatcctggcaattcggatttcaa 759
|||| |||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 532 catcatcaatgttcatcctaggtccataggtgttgaaaatcctggcaatacggatctcaa 473
Query: 760 tgccatgctgcctgtgatagtcgaacatcagcgtctctgctacacgcttaccctcatcat 819
|||| ||||||||||| |||||||||||||| ||||| |||||||||||||||||||| |
Sbjct: 472 tgccgtgctgcctgtggtagtcgaacatcagtgtctcagctacacgcttaccctcatcgt 413
Query: 820 aacagctcctgactccaattgggttaacattgccccagtaggcctcggtttgaggatgct 879
| |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 412 agcagctcctgactccaattgggttaacattgccccagtaggcctccgtctgaggatgct 353
Query: 880 caagcggatcaccataaacttcagatgttgatgtcaacaaaatcctagctccaactctct 939
|||| |||||||||||||||||||| || || |||||||| || ||||||||||||||||
Sbjct: 352 caagaggatcaccataaacttcagaggtcgaagtcaacaatattctagctccaactctct 293
Query: 940 ttgcaaggcccagcatgttcagggtaccaataacatttgtcttgatggtcttaacaggat 999
||||||| || |||||||||| ||| ||||| ||||| |||||||||||||| ||||| |
Sbjct: 292 ttgcaagtccaagcatgttcaaggtcccaatgacattcgtcttgatggtcttgacagggt 233
Query: 1000 tgtgcttgtagaagattggtgaagcagggcaagcaaggtgatagatttggtcaacctcca 1059
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 232 tgtgcttgtagaagattggtgaggcagggcaagcaaggtgatagatttggtcaacctcca 173
Query: 1060 caagaagcggctcggtgacatcatgacggatgagctcaaatcttgggtgtccgatccact 1119
| || || || ||||||||||| |||||||||||||||||||||||||| ||||||||||
Sbjct: 172 cgagcagtggttcggtgacatcgtgacggatgagctcaaatcttgggtggccgatccact 113
Query: 1120 tcttcaggttatcttttgaaccagtgaaaaagttatcagcaacaatgacctcgtgcttct 1179
|||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 112 tcttcaggttgtcttttgaaccagtgaaaaagttgtcagcaacaatgacctcgttcttct 53
Query: 1180 cgttctccatgagcttgtccacgaggtgcgagccgatgaagccc 1223
||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 52 cgttctccatgagcttgtcgacgaggtgcgagccgatgaagccc 9
>gb|BF260905.2|BF260905 HVSMEf0023E01f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0023E01f, mRNA sequence
Length = 758
Score = 743 bits (375), Expect = 0.0
Identities = 513/559 (91%)
Strand = Plus / Minus
Query: 750 cggatttcaatgccatgctgcctgtgatagtcgaacatcagcgtctctgctacacgctta 809
||||| |||||||| ||||||||||| |||||||||||||| ||||| ||||||||||||
Sbjct: 757 cggatctcaatgccgtgctgcctgtggtagtcgaacatcagtgtctcagctacacgctta 698
Query: 810 ccctcatcataacagctcctgactccaattgggttaacattgccccagtaggcctcggtt 869
|||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 697 ccctcatcgtagcagctcctgactccaattgggttaacattgccccagtaggcctccgtc 638
Query: 870 tgaggatgctcaagcggatcaccataaacttcagatgttgatgtcaacaaaatcctagct 929
|||||||||||||| |||||||||||||||||||| || || |||||||| || ||||||
Sbjct: 637 tgaggatgctcaagaggatcaccataaacttcagaggtcgaagtcaacaatattctagct 578
Query: 930 ccaactctctttgcaaggcccagcatgttcagggtaccaataacatttgtcttgatggtc 989
||||||||||||||||| || |||||||||| ||| ||||| ||||| ||||||||||||
Sbjct: 577 ccaactctctttgcaagtccaagcatgttcaaggtcccaatgacattcgtcttgatggtc 518
Query: 990 ttaacaggattgtgcttgtagaagattggtgaagcagggcaagcaaggtgatagatttgg 1049
|| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 517 ttgacagggttgtgcttgtagaagattggtgaggcagggcaagcaaggtgatagatttgg 458
Query: 1050 tcaacctccacaagaagcggctcggtgacatcatgacggatgagctcaaatcttgggtgt 1109
||||||||||| || || || ||||||||||| ||||||||||||||||||||||||||
Sbjct: 457 tcaacctccacgagcagtggttcggtgacatcgtgacggatgagctcaaatcttgggtgg 398
Query: 1110 ccgatccacttcttcaggttatcttttgaaccagtgaaaaagttatcagcaacaatgacc 1169
|||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 397 ccgatccacttcttcaggttgtcttttgaaccagtgaaaaagttgtcagcaacaatgacc 338
Query: 1170 tcgtgcttctcgttctccatgagcttgtccacgaggtgcgagccgatgaagcccgcccca 1229
|||| |||||||||||||||||||||||| ||||||||||||||||||||||| || ||
Sbjct: 337 tcgttcttctcgttctccatgagcttgtcgacgaggtgcgagccgatgaagccagctccg 278
Query: 1230 ccagtgaccaggatccgcaggttagcctggaagaacttggagaagcggaggggcgacggg 1289
|| |||||||||||||||| ||| ||||||||||||||||||||||||| ||| || ||
Sbjct: 277 ccggtgaccaggatccgcatgttggcctggaagaacttggagaagcggatgggggagggc 218
Query: 1290 gtcggcggcgggcgggtgg 1308
|| ||||||||||| ||||
Sbjct: 217 gtgggcggcgggcgcgtgg 199
>gb|CA032127.1|CA032127 HX12B15r HX Hordeum vulgare subsp. vulgare cDNA clone HX12B15
5-PRIME, mRNA sequence
Length = 649
Score = 737 bits (372), Expect = 0.0
Identities = 507/552 (91%)
Strand = Plus / Minus
Query: 757 caatgccatgctgcctgtgatagtcgaacatcagcgtctctgctacacgcttaccctcat 816
||||||| ||||||||||| |||||||||||||| ||||| |||||||||||||||||||
Sbjct: 649 caatgccgtgctgcctgtggtagtcgaacatcagtgtctcagctacacgcttaccctcat 590
Query: 817 cataacagctcctgactccaattgggttaacattgccccagtaggcctcggtttgaggat 876
| || |||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 589 cgtagcagctcctgactccaattgggttaacattgccccagtaggcctccgtctgaggat 530
Query: 877 gctcaagcggatcaccataaacttcagatgttgatgtcaacaaaatcctagctccaactc 936
||||||| |||||||||||||||||||| || || |||||||| || |||||||||||||
Sbjct: 529 gctcaagaggatcaccataaacttcagaggtcgaagtcaacaatattctagctccaactc 470
Query: 937 tctttgcaaggcccagcatgttcagggtaccaataacatttgtcttgatggtcttaacag 996
|||||||||| || |||||||||| ||| ||||| ||||| |||||||||||||| ||||
Sbjct: 469 tctttgcaagtccaagcatgttcaaggtcccaatgacattcgtcttgatggtcttgacag 410
Query: 997 gattgtgcttgtagaagattggtgaagcagggcaagcaaggtgatagatttggtcaacct 1056
| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 409 ggttgtgcttgtagaagattggtgaggcagggcaagcaaggtgatagatttggtcaacct 350
Query: 1057 ccacaagaagcggctcggtgacatcatgacggatgagctcaaatcttgggtgtccgatcc 1116
|||| || || || ||||||||||| |||||||||||||||||||||||||| |||||||
Sbjct: 349 ccacgagcagtggttcggtgacatcgtgacggatgagctcaaatcttgggtggccgatcc 290
Query: 1117 acttcttcaggttatcttttgaaccagtgaaaaagttatcagcaacaatgacctcgtgct 1176
||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||
Sbjct: 289 acttcttcaggttgtcttttgaaccagtgaaaaagttgtcagcaacaatgacctcgttct 230
Query: 1177 tctcgttctccatgagcttgtccacgaggtgcgagccgatgaagcccgccccaccagtga 1236
|||||||||||||||||||||| ||||||||||||||||||||||| || || || ||||
Sbjct: 229 tctcgttctccatgagcttgtcgacgaggtgcgagccgatgaagccagctccgccggtga 170
Query: 1237 ccaggatccgcaggttagcctggaagaacttggagaagcggaggggcgacggggtcggcg 1296
|||||||||||| ||| ||||||||||||||||||||||||| ||| || || || ||||
Sbjct: 169 ccaggatccgcatgttggcctggaagaacttggagaagcggatgggggagggcgtgggcg 110
Query: 1297 gcgggcgggtgg 1308
||||||| ||||
Sbjct: 109 gcgggcgcgtgg 98
>gb|BQ762329.1|BQ762329 EBro01_SQ005_C16_R root, 3 week, hydroponic grown, no treatment, cv
Optic, EBro01 Hordeum vulgare subsp. vulgare cDNA clone
EBro01_SQ005_C16 5', mRNA sequence
Length = 610
Score = 733 bits (370), Expect = 0.0
Identities = 551/609 (90%), Gaps = 2/609 (0%)
Strand = Plus / Minus
Query: 414 gtgatgtccggcttcctctggcggggatcatcaggagtgttctcggtcatcgtcactgtt 473
|||||||| |||||||||||||| || ||||||||||||| ||| ||||||||||||||
Sbjct: 609 gtgatgtcaggcttcctctggcgagggtcatcaggagtgt-ctcagtcatcgtcactgtc 551
Query: 474 atatctgggttaatcaactcc-ttcacattctcagcaagttccagcatggtgaattcacc 532
| |||||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 550 acctctgggttgatcaactcccttcacgttctcagcaagttccagcatggtgaattcacc 491
Query: 533 tgggttccccaagttaatcggcccagtgttgtttccattcatcagtctaataagaccatc 592
||||||||| | |||||| || |||||||||| |||||||||||| | ||||||||||
Sbjct: 490 tgggttcccaatgttaatgggtccagtgttgtctccattcatcagcttcataagaccatt 431
Query: 593 aaccatatcggcgacatagcagaagctcctagtctgtgttcctggcttctggacagtaag 652
|||||||| || || ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 430 gaccatatcagcaacgtagcagaagctcctagtctgtgttcctggcttctggacagtcag 371
Query: 653 gggttcgccacgcacagcctgagcaatgaagttgctaacaacacggccatcgtcaatgtt 712
|| ||| ||||| | ||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 370 ggcttcaccacgtatggcctgagcaatgaagttactaacaacacggccatcatcaatgtt 311
Query: 713 catccttggtccataggtgttgaaaatcctggcaattcggatttcaatgccatgctgcct 772
|||||| ||||||||||||||||||||||||||||| ||||| |||||||| ||||||||
Sbjct: 310 catcctaggtccataggtgttgaaaatcctggcaatacggatctcaatgccgtgctgcct 251
Query: 773 gtgatagtcgaacatcagcgtctctgctacacgcttaccctcatcataacagctcctgac 832
||| |||||||||||||| ||||| | |||||||||||||||||| || |||||||||||
Sbjct: 250 gtggtagtcgaacatcagtgtctcagntacacgcttaccctcatcgtagcagctcctgac 191
Query: 833 tccaattgggttaacattgccccagtaggcctcggtttgaggatgctcaagcggatcacc 892
||||||||||||||||||||||||||||||||| || |||||||||||||| ||||||||
Sbjct: 190 tccaattgggttaacattgccccagtaggcctccgtctgaggatgctcaagaggatcacc 131
Query: 893 ataaacttcagatgttgatgtcaacaaaatcctagctccaactctctttgcaaggcccag 952
|||||||||||| || || |||||||| || ||||||||||||||||||||||| || ||
Sbjct: 130 ataaacttcagaggtcgaagtcaacaatattctagctccaactctctttgcaagtccaag 71
Query: 953 catgttcagggtaccaataacatttgtcttgatggtcttaacaggattgtgcttgtagaa 1012
|||||||| ||| ||||| ||||| |||||||||||||| ||||| ||||||||||||||
Sbjct: 70 catgttcaaggtcccaatgacattcgtcttgatggtcttgacagggttgtgcttgtagaa 11
Query: 1013 gattggtga 1021
|||||||||
Sbjct: 10 gattggtga 2
>gb|CB883635.1|CB883635 HQ02N10w HQ Hordeum vulgare subsp. vulgare cDNA clone HQ02N10
3-PRIME, mRNA sequence
Length = 675
Score = 733 bits (370), Expect = 0.0
Identities = 507/553 (91%)
Strand = Plus / Minus
Query: 756 tcaatgccatgctgcctgtgatagtcgaacatcagcgtctctgctacacgcttaccctca 815
|||||||| ||||||||||| |||||||||||||| ||||| ||||||||||||||||||
Sbjct: 674 tcaatgccgtgctgcctgtggtagtcgaacatcagtgtctcagctacacgcttaccctca 615
Query: 816 tcataacagctcctgactccaattgggttaacattgccccagtaggcctcggtttgagga 875
|| || |||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 614 tcgtagcagctcctgactccaattgggttaacattgccccagtaggcctccgtctgagga 555
Query: 876 tgctcaagcggatcaccataaacttcagatgttgatgtcaacaaaatcctagctccaact 935
|||||||| ||||||||||| |||||||| || || |||||||| || ||||||||||||
Sbjct: 554 tgctcaagaggatcaccatanacttcagaggtcgaagtcaacaatattctagctccaact 495
Query: 936 ctctttgcaaggcccagcatgttcagggtaccaataacatttgtcttgatggtcttaaca 995
||||||||||| || |||||||||| ||| ||||| ||||| |||||||||||||| |||
Sbjct: 494 ctctttgcaagtccaagcatgttcaaggtcccaatgacattcgtcttgatggtcttgaca 435
Query: 996 ggattgtgcttgtagaagattggtgaagcagggcaagcaaggtgatagatttggtcaacc 1055
|| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 434 gggttgtgcttgtagaagattggtgaggcagggcaagcaaggtgatagatttggtcaacc 375
Query: 1056 tccacaagaagcggctcggtgacatcatgacggatgagctcaaatcttgggtgtccgatc 1115
||||| || || || ||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 374 tccacgagcagtggttcggtgacatcgtgacggatgagctcaaatcttgggtggccgatc 315
Query: 1116 cacttcttcaggttatcttttgaaccagtgaaaaagttatcagcaacaatgacctcgtgc 1175
|||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |
Sbjct: 314 cacttcttcaggttgtcttttgaaccagtgaaaaagttgtcagcaacaatgacctcgttc 255
Query: 1176 ttctcgttctccatgagcttgtccacgaggtgcgagccgatgaagcccgccccaccagtg 1235
||||||||||||||||||||||| ||||||||||||||||||||||| || || || |||
Sbjct: 254 ttctcgttctccatgagcttgtcgacgaggtgcgagccgatgaagccagctccgccggtg 195
Query: 1236 accaggatccgcaggttagcctggaagaacttggagaagcggaggggcgacggggtcggc 1295
||||||||||||| ||| ||||||||||||||||||||||||| ||| || || || |||
Sbjct: 194 accaggatccgcatgttggcctggaagaacttggagaagcggatgggggagggcgtgggc 135
Query: 1296 ggcgggcgggtgg 1308
|||||||| ||||
Sbjct: 134 ggcgggcgcgtgg 122
>gb|BM443503.2|BM443503 EBro02_SQ005_G14_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ005_G14 5', mRNA sequence
Length = 671
Score = 729 bits (368), Expect = 0.0
Identities = 500/544 (91%)
Strand = Plus / Minus
Query: 765 tgctgcctgtgatagtcgaacatcagcgtctctgctacacgcttaccctcatcataacag 824
||||||||||| |||||||||||||| ||||| |||||||||||||||||||| || |||
Sbjct: 670 tgctgcctgtggtagtcgaacatcagtgtctcagctacacgcttaccctcatcgtagcag 611
Query: 825 ctcctgactccaattgggttaacattgccccagtaggcctcggtttgaggatgctcaagc 884
||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 610 ctcctgactccaattgggttaacattgccccagtaggcctccgtctgaggatgctcaaga 551
Query: 885 ggatcaccataaacttcagatgttgatgtcaacaaaatcctagctccaactctctttgca 944
|||||||||||||||||||| || || |||||||| || |||||||||||||||||||||
Sbjct: 550 ggatcaccataaacttcagaggtcgaagtcaacaatattctagctccaactctctttgca 491
Query: 945 aggcccagcatgttcagggtaccaataacatttgtcttgatggtcttaacaggattgtgc 1004
|| || |||||||||| ||| ||||| ||||| |||||||||||||| ||||| ||||||
Sbjct: 490 agtccaagcatgttcaaggtcccaatgacattcgtcttgatggtcttgacagggttgtgc 431
Query: 1005 ttgtagaagattggtgaagcagggcaagcaaggtgatagatttggtcaacctccacaaga 1064
||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct: 430 ttgtagaagattggtgaggcagggcaagcaaggtgatagatttggtcaacctccacgagc 371
Query: 1065 agcggctcggtgacatcatgacggatgagctcaaatcttgggtgtccgatccacttcttc 1124
|| || ||||||||||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct: 370 agtggttcggtgacatcgtgacggatgagctcaaatcttgggtggccgatccacttcttc 311
Query: 1125 aggttatcttttgaaccagtgaaaaagttatcagcaacaatgacctcgtgcttctcgttc 1184
||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||
Sbjct: 310 aggttgtcttttgaaccagtgaaaaagttgtcagcaacaatgacctcgttcttctcgttc 251
Query: 1185 tccatgagcttgtccacgaggtgcgagccgatgaagcccgccccaccagtgaccaggatc 1244
|||||||||||||| ||||||||||||||||||||||| || || || ||||||||||||
Sbjct: 250 tccatgagcttgtcgacgaggtgcgagccgatgaagccagctccgccggtgaccaggatc 191
Query: 1245 cgcaggttagcctggaagaacttggagaagcggaggggcgacggggtcggcggcgggcgg 1304
|||| ||| ||||||||||||||||||||||||| ||| || || || |||||||||||
Sbjct: 190 cgcatgttggcctggaagaacttggagaagcggatgggggagggcgtgggcggcgggcgc 131
Query: 1305 gtgg 1308
||||
Sbjct: 130 gtgg 127
>gb|BM371206.2|BM371206 EBro04_SQ003_N12_R root, 3 week, salt-stressed, cv Optic, EBro04
Hordeum vulgare subsp. vulgare cDNA clone
EBro04_SQ003_N12 5', mRNA sequence
Length = 632
Score = 729 bits (368), Expect = 0.0
Identities = 500/544 (91%)
Strand = Plus / Minus
Query: 765 tgctgcctgtgatagtcgaacatcagcgtctctgctacacgcttaccctcatcataacag 824
||||||||||| |||||||||||||| ||||| |||||||||||||||||||| || |||
Sbjct: 631 tgctgcctgtggtagtcgaacatcagtgtctcagctacacgcttaccctcatcgtagcag 572
Query: 825 ctcctgactccaattgggttaacattgccccagtaggcctcggtttgaggatgctcaagc 884
||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 571 ctcctgactccaattgggttaacattgccccagtaggcctccgtctgaggatgctcaaga 512
Query: 885 ggatcaccataaacttcagatgttgatgtcaacaaaatcctagctccaactctctttgca 944
|||||||||||||||||||| || || |||||||| || |||||||||||||||||||||
Sbjct: 511 ggatcaccataaacttcagaggtcgaagtcaacaatattctagctccaactctctttgca 452
Query: 945 aggcccagcatgttcagggtaccaataacatttgtcttgatggtcttaacaggattgtgc 1004
|| || |||||||||| ||| ||||| ||||| |||||||||||||| ||||| ||||||
Sbjct: 451 agtccaagcatgttcaaggtcccaatgacattcgtcttgatggtcttgacagggttgtgc 392
Query: 1005 ttgtagaagattggtgaagcagggcaagcaaggtgatagatttggtcaacctccacaaga 1064
||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct: 391 ttgtagaagattggtgaggcagggcaagcaaggtgatagatttggtcaacctccacgagc 332
Query: 1065 agcggctcggtgacatcatgacggatgagctcaaatcttgggtgtccgatccacttcttc 1124
|| || ||||||||||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct: 331 agtggttcggtgacatcgtgacggatgagctcaaatcttgggtggccgatccacttcttc 272
Query: 1125 aggttatcttttgaaccagtgaaaaagttatcagcaacaatgacctcgtgcttctcgttc 1184
||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||
Sbjct: 271 aggttgtcttttgaaccagtgaaaaagttgtcagcaacaatgacctcgttcttctcgttc 212
Query: 1185 tccatgagcttgtccacgaggtgcgagccgatgaagcccgccccaccagtgaccaggatc 1244
|||||||||||||| ||||||||||||||||||||||| || || || ||||||||||||
Sbjct: 211 tccatgagcttgtcgacgaggtgcgagccgatgaagccagctccgccggtgaccaggatc 152
Query: 1245 cgcaggttagcctggaagaacttggagaagcggaggggcgacggggtcggcggcgggcgg 1304
|||| ||| ||||||||||||||||||||||||| ||| || || || |||||||||||
Sbjct: 151 cgcatgttggcctggaagaacttggagaagcggatgggggagggcgtgggcggcgggcgc 92
Query: 1305 gtgg 1308
||||
Sbjct: 91 gtgg 88
>gb|BQ471323.1|BQ471323 HV02B15r HV Hordeum vulgare subsp. vulgare cDNA clone HV02B15
5-PRIME, mRNA sequence
Length = 677
Score = 728 bits (367), Expect = 0.0
Identities = 499/543 (91%)
Strand = Plus / Minus
Query: 766 gctgcctgtgatagtcgaacatcagcgtctctgctacacgcttaccctcatcataacagc 825
|||||||||| |||||||||||||| ||||| |||||||||||||||||||| || ||||
Sbjct: 677 gctgcctgtggtagtcgaacatcagtgtctcagctacacgcttaccctcatcgtagcagc 618
Query: 826 tcctgactccaattgggttaacattgccccagtaggcctcggtttgaggatgctcaagcg 885
|||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |
Sbjct: 617 tcctgactccaattgggttaacattgccccagtaggcctccgtctgaggatgctcaagag 558
Query: 886 gatcaccataaacttcagatgttgatgtcaacaaaatcctagctccaactctctttgcaa 945
||||||||||||||||||| || || |||||||| || ||||||||||||||||||||||
Sbjct: 557 gatcaccataaacttcagaggtcgaagtcaacaatattctagctccaactctctttgcaa 498
Query: 946 ggcccagcatgttcagggtaccaataacatttgtcttgatggtcttaacaggattgtgct 1005
| || |||||||||| ||| ||||| ||||| |||||||||||||| ||||| |||||||
Sbjct: 497 gtccaagcatgttcaaggtcccaatgacattcgtcttgatggtcttgacagggttgtgct 438
Query: 1006 tgtagaagattggtgaagcagggcaagcaaggtgatagatttggtcaacctccacaagaa 1065
|||||||||||||||| |||||||||||||||||||||||||||||||||||||| || |
Sbjct: 437 tgtagaagattggtgaggcagggcaagcaaggtgatagatttggtcaacctccacgagca 378
Query: 1066 gcggctcggtgacatcatgacggatgagctcaaatcttgggtgtccgatccacttcttca 1125
| || ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 377 gtggttcggtgacatcgtgacggatgagctcaaatcttgggtggccgatccacttcttca 318
Query: 1126 ggttatcttttgaaccagtgaaaaagttatcagcaacaatgacctcgtgcttctcgttct 1185
|||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||
Sbjct: 317 ggttgtcttttgaaccagtgaaaaagttgtcagcaacaatgacctcgttcttctcgttct 258
Query: 1186 ccatgagcttgtccacgaggtgcgagccgatgaagcccgccccaccagtgaccaggatcc 1245
||||||||||||| ||||||||||||||||||||||| || || || |||||||||||||
Sbjct: 257 ccatgagcttgtcgacgaggtgcgagccgatgaagccagctccgccggtgaccaggatcc 198
Query: 1246 gcaggttagcctggaagaacttggagaagcggaggggcgacggggtcggcggcgggcggg 1305
||| ||| ||||||||||||||||||||||||| ||| || || || ||||||||||| |
Sbjct: 197 gcatgttggcctggaagaacttggagaagcggatgggggagggcgtgggcggcgggcgcg 138
Query: 1306 tgg 1308
|||
Sbjct: 137 tgg 135
>gb|BU968575.1|BU968575 HB07P05r BC Hordeum vulgare subsp. vulgare cDNA clone HB07P05
5-PRIME, mRNA sequence
Length = 674
Score = 728 bits (367), Expect = 0.0
Identities = 499/543 (91%)
Strand = Plus / Minus
Query: 766 gctgcctgtgatagtcgaacatcagcgtctctgctacacgcttaccctcatcataacagc 825
|||||||||| |||||||||||||| ||||| |||||||||||||||||||| || ||||
Sbjct: 674 gctgcctgtggtagtcgaacatcagtgtctcagctacacgcttaccctcatcgtagcagc 615
Query: 826 tcctgactccaattgggttaacattgccccagtaggcctcggtttgaggatgctcaagcg 885
|||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |
Sbjct: 614 tcctgactccaattgggttaacattgccccagtaggcctccgtctgaggatgctcaagag 555
Query: 886 gatcaccataaacttcagatgttgatgtcaacaaaatcctagctccaactctctttgcaa 945
||||||||||||||||||| || || |||||||| || ||||||||||||||||||||||
Sbjct: 554 gatcaccataaacttcagaggtcgaagtcaacaatattctagctccaactctctttgcaa 495
Query: 946 ggcccagcatgttcagggtaccaataacatttgtcttgatggtcttaacaggattgtgct 1005
| || |||||||||| ||| ||||| ||||| |||||||||||||| ||||| |||||||
Sbjct: 494 gtccaagcatgttcaaggtcccaatgacattcgtcttgatggtcttgacagggttgtgct 435
Query: 1006 tgtagaagattggtgaagcagggcaagcaaggtgatagatttggtcaacctccacaagaa 1065
|||||||||||||||| |||||||||||||||||||||||||||||||||||||| || |
Sbjct: 434 tgtagaagattggtgaggcagggcaagcaaggtgatagatttggtcaacctccacgagca 375
Query: 1066 gcggctcggtgacatcatgacggatgagctcaaatcttgggtgtccgatccacttcttca 1125
| || ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 374 gtggttcggtgacatcgtgacggatgagctcaaatcttgggtggccgatccacttcttca 315
Query: 1126 ggttatcttttgaaccagtgaaaaagttatcagcaacaatgacctcgtgcttctcgttct 1185
|||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||
Sbjct: 314 ggttgtcttttgaaccagtgaaaaagttgtcagcaacaatgacctcgttcttctcgttct 255
Query: 1186 ccatgagcttgtccacgaggtgcgagccgatgaagcccgccccaccagtgaccaggatcc 1245
||||||||||||| ||||||||||||||||||||||| || || || |||||||||||||
Sbjct: 254 ccatgagcttgtcgacgaggtgcgagccgatgaagccagctccgccggtgaccaggatcc 195
Query: 1246 gcaggttagcctggaagaacttggagaagcggaggggcgacggggtcggcggcgggcggg 1305
||| ||| ||||||||||||||||||||||||| ||| || || || ||||||||||| |
Sbjct: 194 gcatgttggcctggaagaacttggagaagcggatgggggagggcgtgggcggcgggcgcg 135
Query: 1306 tgg 1308
|||
Sbjct: 134 tgg 132
>gb|BU987452.1|BU987452 HF14M18r HF Hordeum vulgare subsp. vulgare cDNA clone HF14M18
5-PRIME, mRNA sequence
Length = 654
Score = 728 bits (367), Expect = 0.0
Identities = 499/543 (91%)
Strand = Plus / Minus
Query: 766 gctgcctgtgatagtcgaacatcagcgtctctgctacacgcttaccctcatcataacagc 825
|||||||||| |||||||||||||| ||||| |||||||||||||||||||| || ||||
Sbjct: 654 gctgcctgtggtagtcgaacatcagtgtctcagctacacgcttaccctcatcgtagcagc 595
Query: 826 tcctgactccaattgggttaacattgccccagtaggcctcggtttgaggatgctcaagcg 885
|||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |
Sbjct: 594 tcctgactccaattgggttaacattgccccagtaggcctccgtctgaggatgctcaagag 535
Query: 886 gatcaccataaacttcagatgttgatgtcaacaaaatcctagctccaactctctttgcaa 945
||||||||||||||||||| || || |||||||| || ||||||||||||||||||||||
Sbjct: 534 gatcaccataaacttcagaggtcgaagtcaacaatattctagctccaactctctttgcaa 475
Query: 946 ggcccagcatgttcagggtaccaataacatttgtcttgatggtcttaacaggattgtgct 1005
| || |||||||||| ||| ||||| ||||| |||||||||||||| ||||| |||||||
Sbjct: 474 gtccaagcatgttcaaggtcccaatgacattcgtcttgatggtcttgacagggttgtgct 415
Query: 1006 tgtagaagattggtgaagcagggcaagcaaggtgatagatttggtcaacctccacaagaa 1065
|||||||||||||||| |||||||||||||||||||||||||||||||||||||| || |
Sbjct: 414 tgtagaagattggtgaggcagggcaagcaaggtgatagatttggtcaacctccacgagca 355
Query: 1066 gcggctcggtgacatcatgacggatgagctcaaatcttgggtgtccgatccacttcttca 1125
| || ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 354 gtggttcggtgacatcgtgacggatgagctcaaatcttgggtggccgatccacttcttca 295
Query: 1126 ggttatcttttgaaccagtgaaaaagttatcagcaacaatgacctcgtgcttctcgttct 1185
|||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||
Sbjct: 294 ggttgtcttttgaaccagtgaaaaagttgtcagcaacaatgacctcgttcttctcgttct 235
Query: 1186 ccatgagcttgtccacgaggtgcgagccgatgaagcccgccccaccagtgaccaggatcc 1245
||||||||||||| ||||||||||||||||||||||| || || || |||||||||||||
Sbjct: 234 ccatgagcttgtcgacgaggtgcgagccgatgaagccagctccgccggtgaccaggatcc 175
Query: 1246 gcaggttagcctggaagaacttggagaagcggaggggcgacggggtcggcggcgggcggg 1305
||| ||| ||||||||||||||||||||||||| ||| || || || ||||||||||| |
Sbjct: 174 gcatgttggcctggaagaacttggagaagcggatgggggagggcgtgggcggcgggcgcg 115
Query: 1306 tgg 1308
|||
Sbjct: 114 tgg 112
>gb|CA018953.1|CA018953 HV10D08r HV Hordeum vulgare subsp. vulgare cDNA clone HV10D08
5-PRIME, mRNA sequence
Length = 666
Score = 728 bits (367), Expect = 0.0
Identities = 499/543 (91%)
Strand = Plus / Minus
Query: 766 gctgcctgtgatagtcgaacatcagcgtctctgctacacgcttaccctcatcataacagc 825
|||||||||| |||||||||||||| ||||| |||||||||||||||||||| || ||||
Sbjct: 666 gctgcctgtggtagtcgaacatcagtgtctcagctacacgcttaccctcatcgtagcagc 607
Query: 826 tcctgactccaattgggttaacattgccccagtaggcctcggtttgaggatgctcaagcg 885
|||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |
Sbjct: 606 tcctgactccaattgggttaacattgccccagtaggcctccgtctgaggatgctcaagag 547
Query: 886 gatcaccataaacttcagatgttgatgtcaacaaaatcctagctccaactctctttgcaa 945
||||||||||||||||||| || || |||||||| || ||||||||||||||||||||||
Sbjct: 546 gatcaccataaacttcagaggtcgaagtcaacaatattctagctccaactctctttgcaa 487
Query: 946 ggcccagcatgttcagggtaccaataacatttgtcttgatggtcttaacaggattgtgct 1005
| || |||||||||| ||| ||||| ||||| |||||||||||||| ||||| |||||||
Sbjct: 486 gtccaagcatgttcaaggtcccaatgacattcgtcttgatggtcttgacagggttgtgct 427
Query: 1006 tgtagaagattggtgaagcagggcaagcaaggtgatagatttggtcaacctccacaagaa 1065
|||||||||||||||| |||||||||||||||||||||||||||||||||||||| || |
Sbjct: 426 tgtagaagattggtgaggcagggcaagcaaggtgatagatttggtcaacctccacgagca 367
Query: 1066 gcggctcggtgacatcatgacggatgagctcaaatcttgggtgtccgatccacttcttca 1125
| || ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 366 gtggttcggtgacatcgtgacggatgagctcaaatcttgggtggccgatccacttcttca 307
Query: 1126 ggttatcttttgaaccagtgaaaaagttatcagcaacaatgacctcgtgcttctcgttct 1185
|||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||
Sbjct: 306 ggttgtcttttgaaccagtgaaaaagttgtcagcaacaatgacctcgttcttctcgttct 247
Query: 1186 ccatgagcttgtccacgaggtgcgagccgatgaagcccgccccaccagtgaccaggatcc 1245
||||||||||||| ||||||||||||||||||||||| || || || |||||||||||||
Sbjct: 246 ccatgagcttgtcgacgaggtgcgagccgatgaagccagctccgccggtgaccaggatcc 187
Query: 1246 gcaggttagcctggaagaacttggagaagcggaggggcgacggggtcggcggcgggcggg 1305
||| ||| ||||||||||||||||||||||||| ||| || || || ||||||||||| |
Sbjct: 186 gcatgttggcctggaagaacttggagaagcggatgggggagggcgtgggcggcgggcgcg 127
Query: 1306 tgg 1308
|||
Sbjct: 126 tgg 124
>gb|CA029444.1|CA029444 HZ65D19r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ65D19
5-PRIME, mRNA sequence
Length = 626
Score = 728 bits (367), Expect = 0.0
Identities = 499/543 (91%)
Strand = Plus / Minus
Query: 766 gctgcctgtgatagtcgaacatcagcgtctctgctacacgcttaccctcatcataacagc 825
|||||||||| |||||||||||||| ||||| |||||||||||||||||||| || ||||
Sbjct: 626 gctgcctgtggtagtcgaacatcagtgtctcagctacacgcttaccctcatcgtagcagc 567
Query: 826 tcctgactccaattgggttaacattgccccagtaggcctcggtttgaggatgctcaagcg 885
|||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |
Sbjct: 566 tcctgactccaattgggttaacattgccccagtaggcctccgtctgaggatgctcaagag 507
Query: 886 gatcaccataaacttcagatgttgatgtcaacaaaatcctagctccaactctctttgcaa 945
||||||||||||||||||| || || |||||||| || ||||||||||||||||||||||
Sbjct: 506 gatcaccataaacttcagaggtcgaagtcaacaatattctagctccaactctctttgcaa 447
Query: 946 ggcccagcatgttcagggtaccaataacatttgtcttgatggtcttaacaggattgtgct 1005
| || |||||||||| ||| ||||| ||||| |||||||||||||| ||||| |||||||
Sbjct: 446 gtccaagcatgttcaaggtcccaatgacattcgtcttgatggtcttgacagggttgtgct 387
Query: 1006 tgtagaagattggtgaagcagggcaagcaaggtgatagatttggtcaacctccacaagaa 1065
|||||||||||||||| |||||||||||||||||||||||||||||||||||||| || |
Sbjct: 386 tgtagaagattggtgaggcagggcaagcaaggtgatagatttggtcaacctccacgagca 327
Query: 1066 gcggctcggtgacatcatgacggatgagctcaaatcttgggtgtccgatccacttcttca 1125
| || ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 326 gtggttcggtgacatcgtgacggatgagctcaaatcttgggtggccgatccacttcttca 267
Query: 1126 ggttatcttttgaaccagtgaaaaagttatcagcaacaatgacctcgtgcttctcgttct 1185
|||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||
Sbjct: 266 ggttgtcttttgaaccagtgaaaaagttgtcagcaacaatgacctcgttcttctcgttct 207
Query: 1186 ccatgagcttgtccacgaggtgcgagccgatgaagcccgccccaccagtgaccaggatcc 1245
||||||||||||| ||||||||||||||||||||||| || || || |||||||||||||
Sbjct: 206 ccatgagcttgtcgacgaggtgcgagccgatgaagccagctccgccggtgaccaggatcc 147
Query: 1246 gcaggttagcctggaagaacttggagaagcggaggggcgacggggtcggcggcgggcggg 1305
||| ||| ||||||||||||||||||||||||| ||| || || || ||||||||||| |
Sbjct: 146 gcatgttggcctggaagaacttggagaagcggatgggggagggcgtgggcggcgggcgcg 87
Query: 1306 tgg 1308
|||
Sbjct: 86 tgg 84
>gb|AL503569.1|AL503569 AL503569 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW02K09T 5', mRNA sequence
Length = 700
Score = 726 bits (366), Expect = 0.0
Identities = 535/586 (91%), Gaps = 4/586 (0%)
Strand = Plus / Minus
Query: 727 aggtgttgaaaa-tcctggcaattcgg-atttcaatgccatgctgcctgtgatagtcgaa 784
|||||||||||| |||||||||| ||| || |||||||| ||||||||||| ||||||||
Sbjct: 668 aggtgttgaaaaatcctggcaatacgggatctcaatgccgtgctgcctgtggtagtcgaa 609
Query: 785 catca-gcgtctctgctacacgctt-accctcatcataacagctcctgactccaattggg 842
||||| | ||||| ||||||||||| ||||||||| || |||||||||||||||||||||
Sbjct: 608 catcaagtgtctcagctacacgctttaccctcatcgtagcagctcctgactccaattggg 549
Query: 843 ttaacattgccccagtaggcctcggtttgaggatgctcaagcggatcaccataaacttca 902
||||||||||||||||||||||| || |||||||||||||| ||||||||||||||||||
Sbjct: 548 ttaacattgccccagtaggcctccgtctgaggatgctcaagaggatcaccataaacttca 489
Query: 903 gatgttgatgtcaacaaaatcctagctccaactctctttgcaaggcccagcatgttcagg 962
|| || || |||||||| || ||||||||||||||||||||||| || |||||||||| |
Sbjct: 488 gaggtcgaagtcaacaatattctagctccaactctctttgcaagtccaagcatgttcaag 429
Query: 963 gtaccaataacatttgtcttgatggtcttaacaggattgtgcttgtagaagattggtgaa 1022
|| ||||| ||||| |||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 428 gtcccaatgacattcgtcttgatggtcttgacagggttgtgcttgtagaagattggtgag 369
Query: 1023 gcagggcaagcaaggtgatagatttggtcaacctccacaagaagcggctcggtgacatca 1082
|||||||||||||||||||||||||||||||||||||| || || || |||||||||||
Sbjct: 368 gcagggcaagcaaggtgatagatttggtcaacctccacgagcagtggttcggtgacatcg 309
Query: 1083 tgacggatgagctcaaatcttgggtgtccgatccacttcttcaggttatcttttgaacca 1142
|||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 308 tgacggatgagctcaaatcttgggtggccgatccacttcttcaggttgtcttttgaacca 249
Query: 1143 gtgaaaaagttatcagcaacaatgacctcgtgcttctcgttctccatgagcttgtccacg 1202
||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| |||
Sbjct: 248 gtgaaaaagttgtcagcaacaatgacctcgttcttctcgttctccatgagcttgtcgacg 189
Query: 1203 aggtgcgagccgatgaagcccgccccaccagtgaccaggatccgcaggttagcctggaag 1262
|||||||||||||||||||| || || || |||||||||||||||| ||| |||||||||
Sbjct: 188 aggtgcgagccgatgaagccagctccgccggtgaccaggatccgcatgttggcctggaag 129
Query: 1263 aacttggagaagcggaggggcgacggggtcggcggcgggcgggtgg 1308
|||||||||||||||| ||| || || || ||||||||||| ||||
Sbjct: 128 aacttggagaagcggatgggggagggcgtgggcggcgggcgcgtgg 83
>gb|BE231175.2|BE231175 HVSMEg0017G06f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0017G06f, mRNA sequence
Length = 939
Score = 726 bits (366), Expect = 0.0
Identities = 550/612 (89%)
Strand = Plus / Minus
Query: 330 cgctcccggaaatcatcctccatgagcaccaagccgtccttcaggacgatcttgggctcc 389
||||||||||| || ||||||||||||||||||||||| ||||||| | ||||||||
Sbjct: 612 cgctcccggaagtcgtcctccatgagcaccaagccgtcacgtaggacgaccntgggctcc 553
Query: 390 caccctagaacttcctttgccttggtgatgtccggcttcctctggcggggatcatcagga 449
|| | ||||| |||| |||||| |||||||| |||||| ||||||| || |||||||||
Sbjct: 552 cagtcaagaacctcctntgcctttgtgatgtcaggcttcttctggcgagggtcatcagga 493
Query: 450 gtgttctcggtcatcgtcactgttatatctgggttaatcaactccttcacattctcagca 509
|||||||| |||||||||||||| | |||||||| |||||||||||||| |||||||||
Sbjct: 492 gtgttctcagtcatcgtcactgtcacttctgggttgatcaactccttcacgttctcagca 433
Query: 510 agttccagcatggtgaattcacctgggttccccaagttaatcggcccagtgttgtttcca 569
|||||||||||||||||||||||||||||||| | |||||| || |||||||||| ||||
Sbjct: 432 agttccagcatggtgaattcacctgggttcccaatgttaatgggtccagtgttgtctcca 373
Query: 570 ttcatcagtctaataagaccatcaaccatatcggcgacatagcagaagctcctagtctgt 629
|||||||| | |||||||||| |||||||| || || |||||||||||||||||||||
Sbjct: 372 ttcatcagcttcataagaccattgaccatatcagcaacgtagcagaagctcctagtctgt 313
Query: 630 gttcctggcttctggacagtaaggggttcgccacgcacagcctgagcaatgaagttgcta 689
|||||||||||||||||||| |||| ||| ||||| | ||||||||||||||||| |||
Sbjct: 312 gttcctggcttctggacagtcagggcttcaccacgtatggcctgagcaatgaagttacta 253
Query: 690 acaacacggccatcgtcaatgttcatccttggtccataggtgttgaaaatcctggcaatt 749
|||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 252 acaacacggccatcatcaatgttcatcctaggtccataggtgttgaaaatcctggcaata 193
Query: 750 cggatttcaatgccatgctgcctgtgatagtcgaacatcagcgtctctgctacacgctta 809
||||| |||||||| ||||||||||| |||||||||||||| ||||| ||||||||||||
Sbjct: 192 cggatctcaatgccgtgctgcctgtggtagtcgaacatcagtgtctcagctacacgctta 133
Query: 810 ccctcatcataacagctcctgactccaattgggttaacattgccccagtaggcctcggtt 869
|||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 132 ccctcatcgtagcagctcctgactccaattgggttaacattgccccagtaggcctccgtc 73
Query: 870 tgaggatgctcaagcggatcaccataaacttcagatgttgatgtcaacaaaatcctagct 929
|||||||||||||| |||||||||||||||||||| || || |||||||| || ||||||
Sbjct: 72 tgaggatgctcaagaggatcaccataaacttcagaggtcgaagtcaacaatattctagct 13
Query: 930 ccaactctcttt 941
||||||||||||
Sbjct: 12 ccaactctcttt 1
>gb|BM370094.2|BM370094 EBro08_SQ002_P14_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ002_P14 5', mRNA sequence
Length = 590
Score = 726 bits (366), Expect = 0.0
Identities = 534/590 (90%)
Strand = Plus / Minus
Query: 431 ctggcggggatcatcaggagtgttctcggtcatcgtcactgttatatctgggttaatcaa 490
|||||| || ||||||||||||||||| |||||||||||||| | |||||||| |||||
Sbjct: 590 ctggcgagggtcatcaggagtgttctcagtcatcgtcactgtcacctctgggttgatcaa 531
Query: 491 ctccttcacattctcagcaagttccagcatggtgaattcacctgggttccccaagttaat 550
||||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct: 530 ctccttcacgttctcagcaagttccagcatggtgaattcacctgggttcccaatgttaat 471
Query: 551 cggcccagtgttgtttccattcatcagtctaataagaccatcaaccatatcggcgacata 610
|| |||||||||| |||||||||||| | |||||||||| |||||||| || || ||
Sbjct: 470 gggtccagtgttgtctccattcatcagcttcataagaccattgaccatatcagcaacgta 411
Query: 611 gcagaagctcctagtctgtgttcctggcttctggacagtaaggggttcgccacgcacagc 670
||||||||||||||||||||||||||||||||||||||| |||| ||| ||||| | ||
Sbjct: 410 gcagaagctcctagtctgtgttcctggcttctggacagtcagggcttcaccacgtatggc 351
Query: 671 ctgagcaatgaagttgctaacaacacggccatcgtcaatgttcatccttggtccataggt 730
||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 350 ctgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtccataggt 291
Query: 731 gttgaaaatcctggcaattcggatttcaatgccatgctgcctgtgatagtcgaacatcag 790
|||||||||||||||||| ||||| |||||||| ||||||||||| ||||||||||||||
Sbjct: 290 gttgaaaatcctggcaatacggatctcaatgccgtgctgcctgtggtagtcgaacatcag 231
Query: 791 cgtctctgctacacgcttaccctcatcataacagctcctgactccaattgggttaacatt 850
||||| |||||||||||||||||||| || |||||||||||||||||||||||||||||
Sbjct: 230 tgtctcagctacacgcttaccctcatcgtagcagctcctgactccaattgggttaacatt 171
Query: 851 gccccagtaggcctcggtttgaggatgctcaagcggatcaccataaacttcagatgttga 910
||||||||||||||| || ||||||||||||| ||||||||||||||||||| || ||
Sbjct: 170 gccccagtaggcctccgtctgaggatgctcaacacgatcaccataaacttcagaggtcga 111
Query: 911 tgtcaacaaaatcctagctccaactctctttgcaaggcccagcatgttcagggtaccaat 970
|||||||| || ||||||||||||||||||||||| || |||||||||| ||| |||||
Sbjct: 110 agtcaacaatattctagctccaactctctttgcaagtccaagcatgttcaaggtcccaat 51
Query: 971 aacatttgtcttgatggtcttaacaggattgtgcttgtagaagattggtg 1020
||||| |||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 50 gacattcgtcttgatggtcttgacagggttgtgcttgtagaagattggtg 1
>gb|BI959050.1|BI959050 HVSMEn0017O17f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0017O17f,
mRNA sequence
Length = 648
Score = 716 bits (361), Expect = 0.0
Identities = 493/537 (91%)
Strand = Plus / Minus
Query: 772 tgtgatagtcgaacatcagcgtctctgctacacgcttaccctcatcataacagctcctga 831
|||| |||||||||||||| ||||| |||||||||||||||||||| || ||||||||||
Sbjct: 644 tgtggtagtcgaacatcagtgtctcagctacacgcttaccctcatcgtagcagctcctga 585
Query: 832 ctccaattgggttaacattgccccagtaggcctcggtttgaggatgctcaagcggatcac 891
|||||||||||||||||||||||||||||||||| || |||||||||||||| |||||||
Sbjct: 584 ctccaattgggttaacattgccccagtaggcctccgtctgaggatgctcaagaggatcac 525
Query: 892 cataaacttcagatgttgatgtcaacaaaatcctagctccaactctctttgcaaggccca 951
||||||||||||| || || |||||||| || ||||||||||||||||||||||| || |
Sbjct: 524 cataaacttcagaggtcgaagtcaacaatattctagctccaactctctttgcaagtccaa 465
Query: 952 gcatgttcagggtaccaataacatttgtcttgatggtcttaacaggattgtgcttgtaga 1011
||||||||| ||| ||||| ||||| |||||||||||||| ||||| |||||||||||||
Sbjct: 464 gcatgttcaaggtcccaatgacattcgtcttgatggtcttgacagggttgtgcttgtaga 405
Query: 1012 agattggtgaagcagggcaagcaaggtgatagatttggtcaacctccacaagaagcggct 1071
|||||||||| |||||||||||||||||||||||||||||||||||||| || || || |
Sbjct: 404 agattggtgaggcagggcaagcaaggtgatagatttggtcaacctccacgagcagtggtt 345
Query: 1072 cggtgacatcatgacggatgagctcaaatcttgggtgtccgatccacttcttcaggttat 1131
|||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 344 cggtgacatcgtgacggatgagctcaaatcttgggtggccgatccacttcttcaggttgt 285
Query: 1132 cttttgaaccagtgaaaaagttatcagcaacaatgacctcgtgcttctcgttctccatga 1191
|||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||
Sbjct: 284 cttttgaaccagtgaaaaagttgtcagcaacaatgacctcgttcttctcgttctccatga 225
Query: 1192 gcttgtccacgaggtgcgagccgatgaagcccgccccaccagtgaccaggatccgcaggt 1251
||||||| ||||||||||||||||||||||| || || || |||||||||||||||| ||
Sbjct: 224 gcttgtcgacgaggtgcgagccgatgaagccagctccgccggtgaccaggatccgcatgt 165
Query: 1252 tagcctggaagaacttggagaagcggaggggcgacggggtcggcggcgggcgggtgg 1308
| ||||||||||||||||||||||||| ||| || || || ||||||||||| ||||
Sbjct: 164 tggcctggaagaacttggagaagcggatgggggagggcgtgggcggcgggcgcgtgg 108
>gb|AV915934.1|AV915934 AV915934 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags16l08 5', mRNA sequence
Length = 661
Score = 716 bits (361), Expect = 0.0
Identities = 500/545 (91%), Gaps = 1/545 (0%)
Strand = Plus / Minus
Query: 765 tgctgcctgtgatagtcgaacatca-gcgtctctgctacacgcttaccctcatcataaca 823
||||||||||| ||||||||||||| | ||||| |||||||||||||||||||| || ||
Sbjct: 658 tgctgcctgtggtagtcgaacatcaagtgtctcagctacacgcttaccctcatcgtagca 599
Query: 824 gctcctgactccaattgggttaacattgccccagtaggcctcggtttgaggatgctcaag 883
|||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 598 gctcctgactccaattgggttaacattgccccagtaggcctccgtctgaggatgctcaag 539
Query: 884 cggatcaccataaacttcagatgttgatgtcaacaaaatcctagctccaactctctttgc 943
|||||||||||||||||||| || || |||||||| || ||||||||||||||||||||
Sbjct: 538 aggatcaccataaacttcagaggtcgaagtcaacaatattctagctccaactctctttgc 479
Query: 944 aaggcccagcatgttcagggtaccaataacatttgtcttgatggtcttaacaggattgtg 1003
||| || |||||||||| ||| ||||| ||||| |||||||||||||| ||||| |||||
Sbjct: 478 aagtccaagcatgttcaaggtcccaatgacattcgtcttgatggtcttgacagggttgtg 419
Query: 1004 cttgtagaagattggtgaagcagggcaagcaaggtgatagatttggtcaacctccacaag 1063
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct: 418 cttgtagaagattggtgaggcagggcaagcaaggtgatagatttggtcaacctccacgag 359
Query: 1064 aagcggctcggtgacatcatgacggatgagctcaaatcttgggtgtccgatccacttctt 1123
|| || ||||||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 358 cagtggttcggtgacatcgtgacggatgagctcaaatcttgggtggccgatccacttctt 299
Query: 1124 caggttatcttttgaaccagtgaaaaagttatcagcaacaatgacctcgtgcttctcgtt 1183
|||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||
Sbjct: 298 caggttgtcttttgaaccagtgaaaaagttgtcagcaacaatgacctcgttcttctcgtt 239
Query: 1184 ctccatgagcttgtccacgaggtgcgagccgatgaagcccgccccaccagtgaccaggat 1243
||||||||||||||| ||||||||||||||||||||||| || || || |||||||||||
Sbjct: 238 ctccatgagcttgtcgacgaggtgcgagccgatgaagccagctccgccggtgaccaggat 179
Query: 1244 ccgcaggttagcctggaagaacttggagaagcggaggggcgacggggtcggcggcgggcg 1303
||||| ||| ||||||||||||||||||||||||| ||| || || || |||||||||||
Sbjct: 178 ccgcatgttggcctggaagaacttggagaagcggatgggggagggcgtgggcggcgggcg 119
Query: 1304 ggtgg 1308
||||
Sbjct: 118 cgtgg 114
>gb|BU997112.1|BU997112 HI06P03r HI Hordeum vulgare subsp. vulgare cDNA clone HI06P03
5-PRIME, mRNA sequence
Length = 641
Score = 714 bits (360), Expect = 0.0
Identities = 495/540 (91%)
Strand = Plus / Minus
Query: 769 gcctgtgatagtcgaacatcagcgtctctgctacacgcttaccctcatcataacagctcc 828
||||||| |||||||||||||| ||||| |||||||||||||||||||| || |||||||
Sbjct: 641 gcctgtggtagtcgaacatcagtgtctcagctacacgcttaccctcatcgtagcagctcc 582
Query: 829 tgactccaattgggttaacattgccccagtaggcctcggtttgaggatgctcaagcggat 888
||||||||||||||||||||||||||||||||||||| || |||||||||||||| ||||
Sbjct: 581 tgactccaattgggttaacattgccccagtaggcctccgtctgaggatgctcaagaggat 522
Query: 889 caccataaacttcagatgttgatgtcaacaaaatcctagctccaactctctttgcaaggc 948
|||||||||||||||| || || |||||||| || ||||||||||||||||||||||| |
Sbjct: 521 caccataaacttcagaggtcgaagtcaacaatattctagctccaactctctttgcaagtc 462
Query: 949 ccagcatgttcagggtaccaataacatttgtcttgatggtcttaacaggattgtgcttgt 1008
| |||||||||| ||| ||||| ||||| |||||||||||||| ||||| ||||||||||
Sbjct: 461 caagcatgttcaaggtcccaatgacattcgtcttgatggtcttgacagggttgtgcttgt 402
Query: 1009 agaagattggtgaagcagggcaagcaaggtgatagatttggtcaacctccacaagaagcg 1068
||||||||||||| | |||||||||||||||||||||||||||||||||||| || || |
Sbjct: 401 agaagattggtgaggaagggcaagcaaggtgatagatttggtcaacctccacgagcagtg 342
Query: 1069 gctcggtgacatcatgacggatgagctcaaatcttgggtgtccgatccacttcttcaggt 1128
| ||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 341 gttcggtgacatcgtgacggatgagctcaaatcttgggtggccgatccacttcttcaggt 282
Query: 1129 tatcttttgaaccagtgaaaaagttatcagcaacaatgacctcgtgcttctcgttctcca 1188
| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||
Sbjct: 281 tgtcttttgaaccagtgaaaaagttgtcagcaacaatgacctcgttcttctcgttctcca 222
Query: 1189 tgagcttgtccacgaggtgcgagccgatgaagcccgccccaccagtgaccaggatccgca 1248
|||||||||| ||||||||||||||||||||||| || || || ||||||||||||||||
Sbjct: 221 tgagcttgtcgacgaggtgcgagccgatgaagccagctccgccggtgaccaggatccgca 162
Query: 1249 ggttagcctggaagaacttggagaagcggaggggcgacggggtcggcggcgggcgggtgg 1308
||| ||||||||||||||||||||||||| ||| || || || ||||||||||| ||||
Sbjct: 161 tgttggcctggaagaacttggagaagcggatgggggagggcgtgggcggcgggcgcgtgg 102
>gb|BI960443.1|BI960443 HVSMEn0024J22f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0024J22f,
mRNA sequence
Length = 641
Score = 712 bits (359), Expect = 0.0
Identities = 488/531 (91%)
Strand = Plus / Minus
Query: 778 agtcgaacatcagcgtctctgctacacgcttaccctcatcataacagctcctgactccaa 837
||||||||||||| ||||| |||||||||||||||||||| || ||||||||||||||||
Sbjct: 641 agtcgaacatcagtgtctcagctacacgcttaccctcatcgtagcagctcctgactccaa 582
Query: 838 ttgggttaacattgccccagtaggcctcggtttgaggatgctcaagcggatcaccataaa 897
|||||||||||||||||||||||||||| || |||||||||||||| |||||||||||||
Sbjct: 581 ttgggttaacattgccccagtaggcctccgtctgaggatgctcaagaggatcaccataaa 522
Query: 898 cttcagatgttgatgtcaacaaaatcctagctccaactctctttgcaaggcccagcatgt 957
||||||| || || |||||||| || ||||||||||||||||||||||| || |||||||
Sbjct: 521 cttcagaggtcgaagtcaacaatattctagctccaactctctttgcaagtccaagcatgt 462
Query: 958 tcagggtaccaataacatttgtcttgatggtcttaacaggattgtgcttgtagaagattg 1017
||| ||| ||||| ||||| |||||||||||||| ||||| |||||||||||||||||||
Sbjct: 461 tcaaggtcccaatgacattcgtcttgatggtcttgacagggttgtgcttgtagaagattg 402
Query: 1018 gtgaagcagggcaagcaaggtgatagatttggtcaacctccacaagaagcggctcggtga 1077
|||| |||||||||||||||||||||||||||||||||||||| || || || |||||||
Sbjct: 401 gtgaggcagggcaagcaaggtgatagatttggtcaacctccacgagcagtggttcggtga 342
Query: 1078 catcatgacggatgagctcaaatcttgggtgtccgatccacttcttcaggttatcttttg 1137
|||| |||||||||||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct: 341 catcgtgacggatgagctcaaatcttgggtggccgatccacttcttcaggttgtcttttg 282
Query: 1138 aaccagtgaaaaagttatcagcaacaatgacctcgtgcttctcgttctccatgagcttgt 1197
|||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 281 aaccagtgaaaaagttgtcagcaacaatgacctcgttcttctcgttctccatgagcttgt 222
Query: 1198 ccacgaggtgcgagccgatgaagcccgccccaccagtgaccaggatccgcaggttagcct 1257
| ||||||||||||||||||||||| || || || |||||||||||||||| ||| ||||
Sbjct: 221 cgacgaggtgcgagccgatgaagccagctccgccggtgaccaggatccgcatgttggcct 162
Query: 1258 ggaagaacttggagaagcggaggggcgacggggtcggcggcgggcgggtgg 1308
||||||||||||||||||||| ||| || || || ||||||||||| ||||
Sbjct: 161 ggaagaacttggagaagcggatgggggagggcgtgggcggcgggcgcgtgg 111
>gb|BJ462617.1|BJ462617 BJ462617 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags29i05 5', mRNA sequence
Length = 604
Score = 710 bits (358), Expect = 0.0
Identities = 529/586 (90%)
Strand = Plus / Minus
Query: 314 cttgggcacggccaggcgctcccggaaatcatcctccatgagcaccaagccgtccttcag 373
||||||||| |||| ||||||||||| || ||||||||||||||||||||||| ||
Sbjct: 604 cttgggcactgccaaacgctcccggaagtcgtcctccatgagcaccaagccgtcacgtag 545
Query: 374 gacgatcttgggctcccaccctagaacttcctttgccttggtgatgtccggcttcctctg 433
||||| |||||||||||| | ||||| ||||||||||| |||||||| |||||||||||
Sbjct: 544 gacgaccttgggctcccagtcaagaacctcctttgcctttgtgatgtcaggcttcctctg 485
Query: 434 gcggggatcatcaggagtgttctcggtcatcgtcactgttatatctgggttaatcaactc 493
||| || ||||||||||||||||| |||||||||||||| | |||||||| ||||||||
Sbjct: 484 gcgagggtcatcaggagtgttctcagtcatcgtcactgtcacctctgggttgatcaactc 425
Query: 494 cttcacattctcagcaagttccagcatggtgaattcacctgggttccccaagttaatcgg 553
|||||| ||||||||||||||||||||||||||||||||||||||||| | |||||| ||
Sbjct: 424 cttcacgttctcagcaagttccagcatggtgaattcacctgggttcccaatgttaatggg 365
Query: 554 cccagtgttgtttccattcatcagtctaataagaccatcaaccatatcggcgacatagca 613
|||||||||| |||||||||||| | |||||||||| |||||||| || || |||||
Sbjct: 364 tccagtgttgtctccattcatcagcttcataagaccattgaccatatcagcaacgtagca 305
Query: 614 gaagctcctagtctgtgttcctggcttctggacagtaaggggttcgccacgcacagcctg 673
|||||||||||||||||||||||||||||||||||| |||| ||| ||||| | |||||
Sbjct: 304 gaagctcctagtctgtgttcctggcttctggacagtcagggcttcaccacgtatggcctg 245
Query: 674 agcaatgaagttgctaacaacacggccatcgtcaatgttcatccttggtccataggtgtt 733
|||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 244 agcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtccataggtgtt 185
Query: 734 gaaaatcctggcaattcggatttcaatgccatgctgcctgtgatagtcgaacatcagcgt 793
||||||||||||||| ||||| |||||||| ||||||||||| |||||||||||||| ||
Sbjct: 184 gaaaatcctggcaatacggatctcaatgccgtgctgcctgtggtagtcgaacatcagtgt 125
Query: 794 ctctgctacacgcttaccctcatcataacagctcctgactccaattgggttaacattgcc 853
||| |||||||||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct: 124 ctcagctacacgcttaccctcatcgtagcagctcctgactccaattgggttaacattgcc 65
Query: 854 ccagtaggcctcggtttgaggatgctcaagcggatcaccataaact 899
|||||||||||| || |||||||||||||| |||||||||||||||
Sbjct: 64 ccagtaggcctccgtctgaggatgctcaagaggatcaccataaact 19
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 143,969
Number of Sequences: 312970
Number of extensions: 143969
Number of successful extensions: 40612
Number of sequences better than 0.5: 314
Number of HSP's better than 0.5 without gapping: 309
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 39603
Number of HSP's gapped (non-prelim): 805
length of query: 1454
length of database: 175,134,539
effective HSP length: 19
effective length of query: 1435
effective length of database: 169,188,109
effective search space: 242784936415
effective search space used: 242784936415
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)