BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1738875.2.1
(761 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BJ448784.1|BJ448784 BJ448784 K. Sato unpublished cDNA li... 339 8e-092
gb|BJ448811.1|BJ448811 BJ448811 K. Sato unpublished cDNA li... 339 8e-092
gb|BJ461948.1|BJ461948 BJ461948 K. Sato unpublished cDNA li... 339 8e-092
gb|BJ461920.1|BJ461920 BJ461920 K. Sato unpublished cDNA li... 325 1e-087
gb|BJ458471.1|BJ458471 BJ458471 K. Sato unpublished cDNA li... 236 9e-061
gb|AV909045.1|AV909045 AV909045 K. Sato unpublished cDNA li... 214 3e-054
gb|BJ450964.1|BJ450964 BJ450964 K. Sato unpublished cDNA li... 214 3e-054
gb|CX662629.1|CX662629 EST 455 Expressed sequences from Bar... 200 5e-050
gb|BI957217.1|BI957217 HVSMEn0008D06f Hordeum vulgare rachi... 186 7e-046
gb|BJ450871.1|BJ450871 BJ450871 K. Sato unpublished cDNA li... 170 4e-041
gb|AV910927.1|AV910927 AV910927 K. Sato unpublished cDNA li... 155 3e-036
emb|Y09233.1|HVCHS2 H.vulgare mRNA for homoeriodictyol/erio... 133 9e-030
gb|AV909853.1|AV909853 AV909853 K. Sato unpublished cDNA li... 105 2e-021
gb|BJ458128.1|BJ458128 BJ458128 K. Sato unpublished cDNA li... 105 2e-021
gb|BJ459861.1|BJ459861 BJ459861 K. Sato unpublished cDNA li... 84 8e-015
gb|BJ448866.1|BJ448866 BJ448866 K. Sato unpublished cDNA li... 78 5e-013
gb|BJ462004.1|BJ462004 BJ462004 K. Sato unpublished cDNA li... 78 5e-013
gb|AV911953.1|AV911953 AV911953 K. Sato unpublished cDNA li... 74 7e-012
gb|BJ458356.1|BJ458356 BJ458356 K. Sato unpublished cDNA li... 60 1e-007
gb|BI960338.1|BI960338 HVSMEn0024E09f Hordeum vulgare rachi... 38 0.41
gb|AL507577.1|AL507577 AL507577 Hordeum vulgare Barke devel... 36 1.6
gb|BF263243.2|BF263243 HV_CEa0006D17f Hordeum vulgare seedl... 36 1.6
gb|BE455315.3|BE455315 HVSMEh0096P24f Hordeum vulgare 5-45 ... 36 1.6
gb|BE601638.3|BE601638 HVSMEh0098C12f Hordeum vulgare 5-45 ... 36 1.6
gb|BE421044.1|BE421044 HWM005.C01 ITEC HWM Barley Leaf Libr... 34 6.4
gb|BE422023.1|BE422023 HWM019cA.12r ITEC HWM Barley Leaf Li... 34 6.4
gb|AL507747.1|AL507747 AL507747 Hordeum vulgare Barke devel... 34 6.4
gb|AL511373.1|AL511373 AL511373 Hordeum vulgare Barke devel... 34 6.4
gb|AL511669.1|AL511669 AL511669 Hordeum vulgare Barke devel... 34 6.4
gb|BI780243.1|BI780243 EBma08_SQ001_N03_R maternal, 28 DPA,... 34 6.4
gb|BE193650.1|BE193650 HVSMEh0082B15f Hordeum vulgare 5-45 ... 34 6.4
gb|BE194581.1|BE194581 HVSMEh0086B16f Hordeum vulgare 5-45 ... 34 6.4
gb|BE194851.2|BE194851 HVSMEh0087D20f Hordeum vulgare 5-45 ... 34 6.4
gb|BE603165.2|BE603165 HVSMEh0102F06f Hordeum vulgare 5-45 ... 34 6.4
gb|BG366849.1|BG366849 HVSMEi0008J23f Hordeum vulgare 20 DA... 34 6.4
gb|BI947670.1|BI947670 HVSMEl0006F20f Hordeum vulgare spike... 34 6.4
gb|BI948087.1|BI948087 HVSMEl0008C12f Hordeum vulgare spike... 34 6.4
gb|BI948592.1|BI948592 HVSMEl0010C24f Hordeum vulgare spike... 34 6.4
gb|BI950011.1|BI950011 HVSMEl0017L12f Hordeum vulgare spike... 34 6.4
gb|BI950101.1|BI950101 HVSMEl0018L04f Hordeum vulgare spike... 34 6.4
gb|BI950723.1|BI950723 HVSMEl0022O16f Hordeum vulgare spike... 34 6.4
gb|BI952548.1|BI952548 HVSMEm0006O12f Hordeum vulgare green... 34 6.4
gb|BI952738.1|BI952738 HVSMEm0007J15f Hordeum vulgare green... 34 6.4
gb|BI957223.1|BI957223 HVSMEn0008D14f Hordeum vulgare rachi... 34 6.4
gb|BE216013.1|BE216013 HV_CEb0009C01f Hordeum vulgare seedl... 34 6.4
gb|BI959009.1|BI959009 HVSMEn0017L03f Hordeum vulgare rachi... 34 6.4
gb|BE194144.2|BE194144 HVSMEh0084E04f Hordeum vulgare 5-45 ... 34 6.4
gb|BE601663.2|BE601663 HVSMEh0099B19f Hordeum vulgare 5-45 ... 34 6.4
gb|AW983124.3|AW983124 HVSMEg0008E05f Hordeum vulgare pre-a... 34 6.4
gb|BE194290.3|BE194290 HVSMEh0085A11f Hordeum vulgare 5-45 ... 34 6.4
gb|BE195426.3|BE195426 HVSMEh0089J14f Hordeum vulgare 5-45 ... 34 6.4
gb|BE602368.3|BE602368 HVSMEh0098K09f Hordeum vulgare 5-45 ... 34 6.4
gb|BE601817.3|BE601817 HVSMEh0099K10f Hordeum vulgare 5-45 ... 34 6.4
gb|BE602683.3|BE602683 HVSMEh0101C09f Hordeum vulgare 5-45 ... 34 6.4
gb|BE602753.3|BE602753 HVSMEh0101I09f Hordeum vulgare 5-45 ... 34 6.4
gb|BE603087.3|BE603087 HVSMEh0101N21f Hordeum vulgare 5-45 ... 34 6.4
gb|BE602039.3|BE602039 HVSMEh0102C10f Hordeum vulgare 5-45 ... 34 6.4
gb|BE602064.3|BE602064 HVSMEh0102E12f Hordeum vulgare 5-45 ... 34 6.4
gb|BG366194.2|BG366194 HVSMEi0006D04f Hordeum vulgare 20 DA... 34 6.4
gb|BG367836.2|BG367836 HVSMEi0013O09f Hordeum vulgare 20 DA... 34 6.4
gb|BG368457.2|BG368457 HVSMEi0019A16f Hordeum vulgare 20 DA... 34 6.4
gb|BG418255.2|BG418255 HVSMEk0022B17f Hordeum vulgare testa... 34 6.4
gb|AV932074.1|AV932074 AV932074 K. Sato unpublished cDNA li... 34 6.4
gb|AV933019.1|AV933019 AV933019 K. Sato unpublished cDNA li... 34 6.4
gb|AV933111.1|AV933111 AV933111 K. Sato unpublished cDNA li... 34 6.4
gb|AV934035.1|AV934035 AV934035 K. Sato unpublished cDNA li... 34 6.4
gb|AV934036.1|AV934036 AV934036 K. Sato unpublished cDNA li... 34 6.4
gb|AV934921.1|AV934921 AV934921 K. Sato unpublished cDNA li... 34 6.4
gb|AV936286.1|AV936286 AV936286 K. Sato unpublished cDNA li... 34 6.4
gb|AV936591.1|AV936591 AV936591 K. Sato unpublished cDNA li... 34 6.4
gb|AV936668.1|AV936668 AV936668 K. Sato unpublished cDNA li... 34 6.4
gb|AJ433814.1|AJ433814 AJ433814 S00002 Hordeum vulgare subs... 34 6.4
gb|BJ468946.1|BJ468946 BJ468946 K. Sato unpublished cDNA li... 34 6.4
gb|BJ469767.1|BJ469767 BJ469767 K. Sato unpublished cDNA li... 34 6.4
gb|BJ469777.1|BJ469777 BJ469777 K. Sato unpublished cDNA li... 34 6.4
gb|BJ470705.1|BJ470705 BJ470705 K. Sato unpublished cDNA li... 34 6.4
gb|BJ470747.1|BJ470747 BJ470747 K. Sato unpublished cDNA li... 34 6.4
gb|BJ471100.1|BJ471100 BJ471100 K. Sato unpublished cDNA li... 34 6.4
gb|BJ471232.1|BJ471232 BJ471232 K. Sato unpublished cDNA li... 34 6.4
gb|BJ471330.1|BJ471330 BJ471330 K. Sato unpublished cDNA li... 34 6.4
gb|BJ471331.1|BJ471331 BJ471331 K. Sato unpublished cDNA li... 34 6.4
gb|BJ471782.1|BJ471782 BJ471782 K. Sato unpublished cDNA li... 34 6.4
gb|BJ471823.1|BJ471823 BJ471823 K. Sato unpublished cDNA li... 34 6.4
gb|BJ472290.1|BJ472290 BJ472290 K. Sato unpublished cDNA li... 34 6.4
gb|BJ473077.1|BJ473077 BJ473077 K. Sato unpublished cDNA li... 34 6.4
gb|BJ473258.1|BJ473258 BJ473258 K. Sato unpublished cDNA li... 34 6.4
gb|BJ473367.1|BJ473367 BJ473367 K. Sato unpublished cDNA li... 34 6.4
gb|BJ473855.1|BJ473855 BJ473855 K. Sato unpublished cDNA li... 34 6.4
gb|BJ473947.1|BJ473947 BJ473947 K. Sato unpublished cDNA li... 34 6.4
gb|BJ475166.1|BJ475166 BJ475166 K. Sato unpublished cDNA li... 34 6.4
gb|BJ475554.1|BJ475554 BJ475554 K. Sato unpublished cDNA li... 34 6.4
gb|BJ475950.1|BJ475950 BJ475950 K. Sato unpublished cDNA li... 34 6.4
gb|BJ476287.1|BJ476287 BJ476287 K. Sato unpublished cDNA li... 34 6.4
gb|BJ476858.1|BJ476858 BJ476858 K. Sato unpublished cDNA li... 34 6.4
gb|BJ476867.1|BJ476867 BJ476867 K. Sato unpublished cDNA li... 34 6.4
gb|BJ477253.1|BJ477253 BJ477253 K. Sato unpublished cDNA li... 34 6.4
gb|BJ477437.1|BJ477437 BJ477437 K. Sato unpublished cDNA li... 34 6.4
gb|BQ459928.1|BQ459928 HA07L03r HA Hordeum vulgare subsp. v... 34 6.4
gb|BQ472893.1|BQ472893 HB01C23r BC Hordeum vulgare subsp. v... 34 6.4
gb|BM441868.2|BM441868 EBed07_SQ001_M11_R endosperm, 28 DPA... 34 6.4
gb|BM441936.2|BM441936 EBed07_SQ001_P14_R endosperm, 28 DPA... 34 6.4
gb|BI780947.2|BI780947 EBma05_SQ001_J22_R maternal, 12 DPA,... 34 6.4
gb|BI780124.2|BI780124 EBma08_SQ001_H14_R maternal, 28 DPA,... 34 6.4
gb|BI780152.2|BI780152 EBma08_SQ001_I21_R maternal, 28 DPA,... 34 6.4
gb|BI780227.2|BI780227 EBma08_SQ001_M08_R maternal, 28 DPA,... 34 6.4
gb|BI780236.2|BI780236 EBma08_SQ001_M19_R maternal, 28 DPA,... 34 6.4
gb|BM096881.2|BM096881 EBma08_SQ001_O08_R maternal, 28 DPA,... 34 6.4
gb|BM371474.2|BM371474 EBma08_SQ002_N23_R maternal, 28 DPA,... 34 6.4
gb|BM371840.2|BM371840 EBma08_SQ004_C07_R maternal, 28 DPA,... 34 6.4
gb|BQ755446.1|BQ755446 EBed07_SQ002_K15_R endosperm, 28 DPA... 34 6.4
gb|BQ755600.1|BQ755600 EBed07_SQ003_G02_R endosperm, 28 DPA... 34 6.4
gb|BQ755759.1|BQ755759 EBed07_SQ003_C16_R endosperm, 28 DPA... 34 6.4
gb|BQ758561.1|BQ758561 EBma07_SQ002_J03_R maternal, 21 DPA,... 34 6.4
gb|BQ758642.1|BQ758642 EBma07_SQ002_J10_R maternal, 21 DPA,... 34 6.4
gb|BQ758688.1|BQ758688 EBma07_SQ002_D13_R maternal, 21 DPA,... 34 6.4
gb|BQ758852.1|BQ758852 EBma07_SQ003_D01_R maternal, 21 DPA,... 34 6.4
gb|BQ758881.1|BQ758881 EBma07_SQ003_I02_R maternal, 21 DPA,... 34 6.4
gb|BQ759064.1|BQ759064 EBma07_SQ003_M14_R maternal, 21 DPA,... 34 6.4
gb|BU966793.1|BU966793 HB02G04r BC Hordeum vulgare subsp. v... 34 6.4
gb|BU967149.1|BU967149 HB03G23r BC Hordeum vulgare subsp. v... 34 6.4
gb|BU970256.1|BU970256 HB14B20r BC Hordeum vulgare subsp. v... 34 6.4
gb|BU971943.1|BU971943 HB20C06r BC Hordeum vulgare subsp. v... 34 6.4
gb|BU972277.1|BU972277 HB21D02r BC Hordeum vulgare subsp. v... 34 6.4
gb|BU972840.1|BU972840 HB22O02r BC Hordeum vulgare subsp. v... 34 6.4
gb|BU972847.1|BU972847 HB22O10r BC Hordeum vulgare subsp. v... 34 6.4
gb|BU973152.1|BU973152 HB23O19r BC Hordeum vulgare subsp. v... 34 6.4
gb|BU973433.1|BU973433 HB24O23r BC Hordeum vulgare subsp. v... 34 6.4
gb|BU973836.1|BU973836 HB26B20r BC Hordeum vulgare subsp. v... 34 6.4
gb|BU984334.1|BU984334 HF03K08r HF Hordeum vulgare subsp. v... 34 6.4
gb|BU984591.1|BU984591 HF04G05r HF Hordeum vulgare subsp. v... 34 6.4
gb|BU985194.1|BU985194 HF06G14r HF Hordeum vulgare subsp. v... 34 6.4
gb|BU986179.1|BU986179 HF09O14r HF Hordeum vulgare subsp. v... 34 6.4
gb|BU987018.1|BU987018 HF13J06r HF Hordeum vulgare subsp. v... 34 6.4
gb|BU987439.1|BU987439 HF14M05r HF Hordeum vulgare subsp. v... 34 6.4
gb|BU987631.1|BU987631 HF15E22r HF Hordeum vulgare subsp. v... 34 6.4
gb|BU987866.1|BU987866 HF15P22r HF Hordeum vulgare subsp. v... 34 6.4
gb|BU988329.1|BU988329 HF17F04r HF Hordeum vulgare subsp. v... 34 6.4
gb|BU988853.1|BU988853 HF18O15r HF Hordeum vulgare subsp. v... 34 6.4
gb|BU988982.1|BU988982 HF19G04r HF Hordeum vulgare subsp. v... 34 6.4
gb|BU989539.1|BU989539 HF22A08r HF Hordeum vulgare subsp. v... 34 6.4
gb|BU989558.1|BU989558 HF22B04r HF Hordeum vulgare subsp. v... 34 6.4
gb|BU989747.1|BU989747 HF22J11r HF Hordeum vulgare subsp. v... 34 6.4
gb|BU994505.1|BU994505 HM07E15r HM Hordeum vulgare subsp. v... 34 6.4
gb|CA008241.1|CA008241 HU10F13r HU Hordeum vulgare subsp. v... 34 6.4
gb|CA010976.1|CA010976 HT07J23u HT Hordeum vulgare subsp. v... 34 6.4
gb|CA013174.1|CA013174 HT07J23r HT Hordeum vulgare subsp. v... 34 6.4
gb|CB859632.1|CB859632 HI11B04w HI Hordeum vulgare subsp. v... 34 6.4
gb|CB880033.1|CB880033 HM05E15w HM Hordeum vulgare subsp. v... 34 6.4
>gb|BJ448784.1|BJ448784 BJ448784 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak21d17 5', mRNA sequence
Length = 650
Score = 339 bits (171), Expect = 8e-092
Identities = 366/431 (84%)
Strand = Plus / Plus
Query: 2 ctgcccgactcggagggcgccatcgacggccacctccgcgaggtggggctcaccttccac 61
||||| ||||||||||||||||||||||||||||| || ||||| || ||||||||||||
Sbjct: 39 ctgccagactcggagggcgccatcgacggccaccttcgtgaggttggactcaccttccac 98
Query: 62 ctgctcaaggacgtgcccgggctcatctccaagaacatcggccgcgcgctggacgacgcg 121
|| || |||||||||||||||||||||||||||||||||| ||||| || || |||||
Sbjct: 99 ctcctgaaggacgtgcccgggctcatctccaagaacatcgagcgcgccctagaggacgcc 158
Query: 122 ttcaagccgctcggcatctccgactggaactccatcttctgggtggcgcaccccggcggg 181
|||||||| | |||||| |||||||||||| |||| ||| | |||||||||||||||
Sbjct: 159 ttcaagccattgggcatcgatgactggaactccgtcttttggatagcgcaccccggcggg 218
Query: 182 cccgccatcctcgaccaggtggaggccaaggtcgggctggacaaggccaggatgcgcgcc 241
|| || ||||| ||| ||||||||||||||| ||| |||||| |||||||||||
Sbjct: 219 ccagcaatccttgacatggtggaggccaaggtaaacctgaacaaggaacggatgcgcgcc 278
Query: 242 acccgccacgtcctctccgagtacggcaacatgtccagcgcctgcgtcctcttcatcctc 301
||| | || ||||||||||| || ||||||||||| ||||||||||| ||||||||| |
Sbjct: 279 accaggcatgtcctctccgaatatggcaacatgtcgagcgcctgcgtgctcttcatcatg 338
Query: 302 gacgagatgcgcaagcgctccgccgaggacggacaggccaccacgggcgagggcctcgac 361
||||| |||||||| |||||||| ||||| || || |||| || |||||||| | |||
Sbjct: 339 gacgaaatgcgcaaacgctccgctgaggatggccacaccacgactggcgagggaatggac 398
Query: 362 tggggcgtcctcttcggcttcggcccgggactcaccgtcgagaccgtcgtgctccacagc 421
|||||||| ||||||||||||||||| || || ||||| ||||| ||||| ||||| |||
Sbjct: 399 tggggcgttctcttcggcttcggccccggccttaccgtggagacggtcgttctccatagc 458
Query: 422 gtccccatcac 432
|||||||||||
Sbjct: 459 gtccccatcac 469
>gb|BJ448811.1|BJ448811 BJ448811 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak21f08 5', mRNA sequence
Length = 580
Score = 339 bits (171), Expect = 8e-092
Identities = 366/431 (84%)
Strand = Plus / Plus
Query: 2 ctgcccgactcggagggcgccatcgacggccacctccgcgaggtggggctcaccttccac 61
||||| ||||||||||||||||||||||||||||| || ||||| || ||||||||||||
Sbjct: 39 ctgccagactcggagggcgccatcgacggccaccttcgtgaggttggactcaccttccac 98
Query: 62 ctgctcaaggacgtgcccgggctcatctccaagaacatcggccgcgcgctggacgacgcg 121
|| || |||||||||||||||||||||||||||||||||| ||||| || || |||||
Sbjct: 99 ctcctgaaggacgtgcccgggctcatctccaagaacatcgagcgcgccctagaggacgcc 158
Query: 122 ttcaagccgctcggcatctccgactggaactccatcttctgggtggcgcaccccggcggg 181
|||||||| | |||||| |||||||||||| |||| ||| | |||||||||||||||
Sbjct: 159 ttcaagccattgggcatcgatgactggaactccgtcttttggatagcgcaccccggcggg 218
Query: 182 cccgccatcctcgaccaggtggaggccaaggtcgggctggacaaggccaggatgcgcgcc 241
|| || ||||| ||| ||||||||||||||| ||| |||||| |||||||||||
Sbjct: 219 ccagcaatccttgacatggtggaggccaaggtaaacctgaacaaggaacggatgcgcgcc 278
Query: 242 acccgccacgtcctctccgagtacggcaacatgtccagcgcctgcgtcctcttcatcctc 301
||| | || ||||||||||| || ||||||||||| ||||||||||| ||||||||| |
Sbjct: 279 accaggcatgtcctctccgaatatggcaacatgtcgagcgcctgcgtgctcttcatcatg 338
Query: 302 gacgagatgcgcaagcgctccgccgaggacggacaggccaccacgggcgagggcctcgac 361
||||| |||||||| |||||||| ||||| || || |||| || |||||||| | |||
Sbjct: 339 gacgaaatgcgcaaacgctccgctgaggatggccacaccacgactggcgagggaatggac 398
Query: 362 tggggcgtcctcttcggcttcggcccgggactcaccgtcgagaccgtcgtgctccacagc 421
|||||||| ||||||||||||||||| || || ||||| ||||| ||||| ||||| |||
Sbjct: 399 tggggcgttctcttcggcttcggccccggccttaccgtggagacggtcgttctccatagc 458
Query: 422 gtccccatcac 432
|||||||||||
Sbjct: 459 gtccccatcac 469
>gb|BJ461948.1|BJ461948 BJ461948 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak21f08 3', mRNA sequence
Length = 600
Score = 339 bits (171), Expect = 8e-092
Identities = 366/431 (84%)
Strand = Plus / Minus
Query: 2 ctgcccgactcggagggcgccatcgacggccacctccgcgaggtggggctcaccttccac 61
||||| ||||||||||||||||||||||||||||| || ||||| || ||||||||||||
Sbjct: 561 ctgccagactcggagggcgccatcgacggccaccttcgtgaggttggactcaccttccac 502
Query: 62 ctgctcaaggacgtgcccgggctcatctccaagaacatcggccgcgcgctggacgacgcg 121
|| || |||||||||||||||||||||||||||||||||| ||||| || || |||||
Sbjct: 501 ctcctgaaggacgtgcccgggctcatctccaagaacatcgagcgcgccctagaggacgcc 442
Query: 122 ttcaagccgctcggcatctccgactggaactccatcttctgggtggcgcaccccggcggg 181
|||||||| | |||||| |||||||||||| |||| ||| | |||||||||||||||
Sbjct: 441 ttcaagccattgggcatcgatgactggaactccgtcttttggatagcgcaccccggcggg 382
Query: 182 cccgccatcctcgaccaggtggaggccaaggtcgggctggacaaggccaggatgcgcgcc 241
|| || ||||| ||| ||||||||||||||| ||| |||||| |||||||||||
Sbjct: 381 ccagcaatccttgacatggtggaggccaaggtaaacctgaacaaggaacggatgcgcgcc 322
Query: 242 acccgccacgtcctctccgagtacggcaacatgtccagcgcctgcgtcctcttcatcctc 301
||| | || ||||||||||| || ||||||||||| ||||||||||| ||||||||| |
Sbjct: 321 accaggcatgtcctctccgaatatggcaacatgtcgagcgcctgcgtgctcttcatcatg 262
Query: 302 gacgagatgcgcaagcgctccgccgaggacggacaggccaccacgggcgagggcctcgac 361
||||| |||||||| |||||||| ||||| || || |||| || |||||||| | |||
Sbjct: 261 gacgaaatgcgcaaacgctccgctgaggatggccacaccacgactggcgagggaatggac 202
Query: 362 tggggcgtcctcttcggcttcggcccgggactcaccgtcgagaccgtcgtgctccacagc 421
|||||||| ||||||||||||||||| || || ||||| ||||| ||||| ||||| |||
Sbjct: 201 tggggcgttctcttcggcttcggccccggccttaccgtggagacggtcgttctccatagc 142
Query: 422 gtccccatcac 432
|||||||||||
Sbjct: 141 gtccccatcac 131
>gb|BJ461920.1|BJ461920 BJ461920 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak21d17 3', mRNA sequence
Length = 600
Score = 325 bits (164), Expect = 1e-087
Identities = 366/432 (84%), Gaps = 1/432 (0%)
Strand = Plus / Minus
Query: 2 ctgcccgactcggagggcgccatcgacgg-ccacctccgcgaggtggggctcaccttcca 60
||||| ||||||||||||||||||||||| |||||| || ||||| || |||||||||||
Sbjct: 560 ctgccagactcggagggcgccatcgacgggccaccttcgtgaggttggactcaccttcca 501
Query: 61 cctgctcaaggacgtgcccgggctcatctccaagaacatcggccgcgcgctggacgacgc 120
||| || |||||||||||||||||||||||||||||||||| ||||| || || |||||
Sbjct: 500 cctcctgaaggacgtgcccgggctcatctccaagaacatcgagcgcgccctagaggacgc 441
Query: 121 gttcaagccgctcggcatctccgactggaactccatcttctgggtggcgcaccccggcgg 180
|||||||| | |||||| |||||||||||| |||| ||| | ||||||||||||||
Sbjct: 440 cttcaagccattgggcatcgatgactggaactccgtcttttggatagcgcaccccggcgg 381
Query: 181 gcccgccatcctcgaccaggtggaggccaaggtcgggctggacaaggccaggatgcgcgc 240
||| || ||||| ||| ||||||||||||||| ||| |||||| ||||||||||
Sbjct: 380 gccagcaatccttgacatggtggaggccaaggtaaacctgaacaaggaacggatgcgcgc 321
Query: 241 cacccgccacgtcctctccgagtacggcaacatgtccagcgcctgcgtcctcttcatcct 300
|||| | || ||||||||||| || ||||||||||| ||||||||||| ||||||||| |
Sbjct: 320 caccaggcatgtcctctccgaatatggcaacatgtcgagcgcctgcgtgctcttcatcat 261
Query: 301 cgacgagatgcgcaagcgctccgccgaggacggacaggccaccacgggcgagggcctcga 360
||||| |||||||| |||||||| ||||| || || |||| || |||||||| | ||
Sbjct: 260 ggacgaaatgcgcaaacgctccgctgaggatggccacaccacgactggcgagggaatgga 201
Query: 361 ctggggcgtcctcttcggcttcggcccgggactcaccgtcgagaccgtcgtgctccacag 420
||||||||| ||||||||||||||||| || || ||||| ||||| ||||| ||||| ||
Sbjct: 200 ctggggcgttctcttcggcttcggccccggccttaccgtggagacggtcgttctccatag 141
Query: 421 cgtccccatcac 432
||||||||||||
Sbjct: 140 cgtccccatcac 129
>gb|BJ458471.1|BJ458471 BJ458471 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak32c10 3', mRNA sequence
Length = 752
Score = 236 bits (119), Expect = 9e-061
Identities = 353/431 (81%)
Strand = Plus / Minus
Query: 2 ctgcccgactcggagggcgccatcgacggccacctccgcgaggtggggctcaccttccac 61
||||| ||||| |||||||||||||||||||||||||| ||||| || ||||||||||||
Sbjct: 703 ctgccagactcagagggcgccatcgacggccacctccgggaggtcggcctcaccttccac 644
Query: 62 ctgctcaaggacgtgcccgggctcatctccaagaacatcggccgcgcgctggacgacgcg 121
|| |||||||| ||||| |||||||||||||||||||| | ||||| || || |||||
Sbjct: 643 ctcctcaaggatgtgcctgggctcatctccaagaacatagagcgcgccctagaggacgcc 584
Query: 122 ttcaagccgctcggcatctccgactggaactccatcttctgggtggcgcaccccggcggg 181
|||||||| | || ||| || ||||||||| |||||||| | |||||||||||||||
Sbjct: 583 ttcaagccattgggtatcgatgattggaactccgtcttctggatagcgcaccccggcggg 524
Query: 182 cccgccatcctcgaccaggtggaggccaaggtcgggctggacaaggccaggatgcgcgcc 241
|| || ||||| ||| |||||| |||||||| ||| |||||| | |||||||||
Sbjct: 523 ccagcaatccttgacatggtggaagccaaggtaaacctgaacaaggaacgaatgcgcgcc 464
Query: 242 acccgccacgtcctctccgagtacggcaacatgtccagcgcctgcgtcctcttcatcctc 301
||| | || ||||| || || || ||||||||||| ||||| ||||| ||||||||| |
Sbjct: 463 accaggcatgtcctttctgaatatggcaacatgtcaagcgcatgcgttctcttcatcatg 404
Query: 302 gacgagatgcgcaagcgctccgccgaggacggacaggccaccacgggcgagggcctcgac 361
||||| |||||||| || ||||| ||||| || || |||| || || ||||| | |||
Sbjct: 403 gacgaaatgcgcaaacggtccgctgaggatgggcacaccacaaccggagagggaatggac 344
Query: 362 tggggcgtcctcttcggcttcggcccgggactcaccgtcgagaccgtcgtgctccacagc 421
||||| || || |||||||| || || || |||||||||||||| ||||| ||||| |||
Sbjct: 343 tggggagttctattcggctttggtcccggcctcaccgtcgagacggtcgtcctccatagc 284
Query: 422 gtccccatcac 432
|||||| ||||
Sbjct: 283 gtccccgtcac 273
>gb|AV909045.1|AV909045 AV909045 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak11g05 5', mRNA sequence
Length = 645
Score = 214 bits (108), Expect = 3e-054
Identities = 330/404 (81%)
Strand = Plus / Plus
Query: 2 ctgcccgactcggagggcgccatcgacggccacctccgcgaggtggggctcaccttccac 61
||||| ||||| |||||||||||||||||||||||||| ||||| || ||||||||||||
Sbjct: 241 ctgccagactcagagggcgccatcgacggccacctccgggaggtcggcctcaccttccac 300
Query: 62 ctgctcaaggacgtgcccgggctcatctccaagaacatcggccgcgcgctggacgacgcg 121
|| |||||||| ||||| |||||||||||||||||||| | ||||| || || |||||
Sbjct: 301 ctcctcaaggatgtgcctgggctcatctccaagaacatagagcgcgccctagaggacgcc 360
Query: 122 ttcaagccgctcggcatctccgactggaactccatcttctgggtggcgcaccccggcggg 181
|||||||| | || ||| || ||||||||| |||||||| | |||||||||||||||
Sbjct: 361 ttcaagccattgggtatcgatgattggaactccgtcttctggatagcgcaccccggcggg 420
Query: 182 cccgccatcctcgaccaggtggaggccaaggtcgggctggacaaggccaggatgcgcgcc 241
|| || ||||| ||| |||||| |||||||| ||| |||||| | |||||||||
Sbjct: 421 ccagcaatccttgacatggtggaagccaaggtaaacctgaacaaggaacgaatgcgcgcc 480
Query: 242 acccgccacgtcctctccgagtacggcaacatgtccagcgcctgcgtcctcttcatcctc 301
||| | || ||||| || || || ||||||||||| ||||| ||||| ||||||||| |
Sbjct: 481 accaggcatgtcctttctgaatatggcaacatgtcaagcgcatgcgttctcttcatcatg 540
Query: 302 gacgagatgcgcaagcgctccgccgaggacggacaggccaccacgggcgagggcctcgac 361
||||| |||||||| || ||||| ||||| || || |||| || || ||||| | |||
Sbjct: 541 gacgaaatgcgcaaacggtccgctgaggatgggcacaccacaaccggagagggaatggac 600
Query: 362 tggggcgtcctcttcggcttcggcccgggactcaccgtcgagac 405
||||| || || |||||||| || || || ||||||||||||||
Sbjct: 601 tggggagttctattcggctttggtcccggcctcaccgtcgagac 644
>gb|BJ450964.1|BJ450964 BJ450964 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak32c10 5', mRNA sequence
Length = 638
Score = 214 bits (108), Expect = 3e-054
Identities = 330/404 (81%)
Strand = Plus / Plus
Query: 2 ctgcccgactcggagggcgccatcgacggccacctccgcgaggtggggctcaccttccac 61
||||| ||||| |||||||||||||||||||||||||| ||||| || ||||||||||||
Sbjct: 234 ctgccagactcagagggcgccatcgacggccacctccgggaggtcggcctcaccttccac 293
Query: 62 ctgctcaaggacgtgcccgggctcatctccaagaacatcggccgcgcgctggacgacgcg 121
|| |||||||| ||||| |||||||||||||||||||| | ||||| || || |||||
Sbjct: 294 ctcctcaaggatgtgcctgggctcatctccaagaacatagagcgcgccctagaggacgcc 353
Query: 122 ttcaagccgctcggcatctccgactggaactccatcttctgggtggcgcaccccggcggg 181
|||||||| | || ||| || ||||||||| |||||||| | |||||||||||||||
Sbjct: 354 ttcaagccattgggtatcgatgattggaactccgtcttctggatagcgcaccccggcggg 413
Query: 182 cccgccatcctcgaccaggtggaggccaaggtcgggctggacaaggccaggatgcgcgcc 241
|| || ||||| ||| |||||| |||||||| ||| |||||| | |||||||||
Sbjct: 414 ccagcaatccttgacatggtggaagccaaggtaaacctgaacaaggaacgaatgcgcgcc 473
Query: 242 acccgccacgtcctctccgagtacggcaacatgtccagcgcctgcgtcctcttcatcctc 301
||| | || ||||| || || || ||||||||||| ||||| ||||| ||||||||| |
Sbjct: 474 accaggcatgtcctttctgaatatggcaacatgtcaagcgcatgcgttctcttcatcatg 533
Query: 302 gacgagatgcgcaagcgctccgccgaggacggacaggccaccacgggcgagggcctcgac 361
||||| |||||||| || ||||| ||||| || || |||| || || ||||| | |||
Sbjct: 534 gacgaaatgcgcaaacggtccgctgaggatgggcacaccacaaccggagagggaatggac 593
Query: 362 tggggcgtcctcttcggcttcggcccgggactcaccgtcgagac 405
||||| || || |||||||| || || || ||||||||||||||
Sbjct: 594 tggggagttctattcggctttggtcccggcctcaccgtcgagac 637
>gb|CX662629.1|CX662629 EST 455 Expressed sequences from Barley Hordeum vulgare subsp.
vulgare cDNA clone P455 5', mRNA sequence
Length = 316
Score = 200 bits (101), Expect = 5e-050
Identities = 176/201 (87%)
Strand = Plus / Plus
Query: 231 ggatgcgcgccacccgccacgtcctctccgagtacggcaacatgtccagcgcctgcgtcc 290
|||||||||| ||| | || ||||||||||||||||||||||||||||| || || ||||
Sbjct: 45 ggatgcgcgcaaccaggcatgtcctctccgagtacggcaacatgtccagtgcatgtgtcc 104
Query: 291 tcttcatcctcgacgagatgcgcaagcgctccgccgaggacggacaggccaccacgggcg 350
| |||||| | |||||||||||||||||||| |||||||| || || ||||| || ||||
Sbjct: 105 ttttcatcatggacgagatgcgcaagcgctctgccgaggatggccacgccacaaccggcg 164
Query: 351 agggcctcgactggggcgtcctcttcggcttcggcccgggactcaccgtcgagaccgtcg 410
|||| | ||||||||||| ||||||||||||||||| || ||||| || ||||||||||
Sbjct: 165 agggaatggactggggcgttctcttcggcttcggccccggcctcacggtggagaccgtcg 224
Query: 411 tgctccacagcgtccccatca 431
| |||||||||||||||||||
Sbjct: 225 tcctccacagcgtccccatca 245
>gb|BI957217.1|BI957217 HVSMEn0008D06f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0008D06f, mRNA sequence
Length = 621
Score = 186 bits (94), Expect = 7e-046
Identities = 159/181 (87%)
Strand = Plus / Minus
Query: 251 gtcctctccgagtacggcaacatgtccagcgcctgcgtcctcttcatcctcgacgagatg 310
|||||||||||||||||| |||||||||| || || ||||| |||||| | |||||||||
Sbjct: 545 gtcctctccgagtacggcnacatgtccagtgcatgtgtccttttcatcatggacgagatg 486
Query: 311 cgcaagcgctccgccgaggacggacaggccaccacgggcgagggcctcgactggggcgtc 370
||||||||||| |||||||| || || ||||| || |||||||| | |||||||||||
Sbjct: 485 cgcaagcgctctgccgaggatggccacgccacaaccggcgagggaatggactggggcgtt 426
Query: 371 ctcttcggcttcggcccgggactcaccgtcgagaccgtcgtgctccacagcgtccccatc 430
||||||||||||||||| || ||||| || ||||||||||| ||||||||||||||||||
Sbjct: 425 ctcttcggcttcggccccggcctcacggtggagaccgtcgtcctccacagcgtccccatc 366
Query: 431 a 431
|
Sbjct: 365 a 365
>gb|BJ450871.1|BJ450871 BJ450871 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak31l01 5', mRNA sequence
Length = 424
Score = 170 bits (86), Expect = 4e-041
Identities = 251/307 (81%)
Strand = Plus / Plus
Query: 9 actcggagggcgccatcgacggccacctccgcgaggtggggctcaccttccacctgctca 68
|||| |||||||||||||||||||||||||| ||||| || |||||||||||||| ||||
Sbjct: 47 actcagagggcgccatcgacggccacctccgggaggtcggcctcaccttccacctcctca 106
Query: 69 aggacgtgcccgggctcatctccaagaacatcggccgcgcgctggacgacgcgttcaagc 128
|||| ||||| |||||||||||||||||||| | ||||| || || ||||| |||||||
Sbjct: 107 aggatgtgcctgggctcatctccaagaacatagagcgcgccctagaggacgccttcaagc 166
Query: 129 cgctcggcatctccgactggaactccatcttctgggtggcgcaccccggcgggcccgcca 188
| | || ||| || ||||||||| |||||||| | |||||||||||||| | || |
Sbjct: 167 cattgggtatcgatgattggaactccgtcttctggatagcgcaccccggcggnncagcaa 226
Query: 189 tcctcgaccaggtggaggccaaggtcgggctggacaaggccaggatgcgcgccacccgcc 248
|||| ||| |||||| |||||||| ||| |||||| | |||||||||||| | |
Sbjct: 227 tccttgacatggtggaagccaaggtaaacctgaacaaggaacgaatgcgcgccaccaggc 286
Query: 249 acgtcctctccgagtacggcaacatgtccagcgcctgcgtcctcttcatcctcgacgaga 308
| ||||| || || || ||||||||||| ||||| ||||| || |||||| | ||||| |
Sbjct: 287 atgtcctttctgaatatggcaacatgtcaagcgcatgcgttctnttcatcatggacgaaa 346
Query: 309 tgcgcaa 315
|||||||
Sbjct: 347 tgcgcaa 353
>gb|AV910927.1|AV910927 AV910927 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak11g05 3', mRNA sequence
Length = 629
Score = 155 bits (78), Expect = 3e-036
Identities = 294/366 (80%)
Strand = Plus / Minus
Query: 67 caaggacgtgcccgggctcatctccaagaacatcggccgcgcgctggacgacgcgttcaa 126
|||||| ||||| |||||||||||||||||||| | ||||| || || ||||| |||||
Sbjct: 629 caaggatgtgcctgggctcatctccaagaacatagagcgcgccctagaggacgccttcaa 570
Query: 127 gccgctcggcatctccgactggaactccatcttctgggtggcgcaccccggcgggcccgc 186
||| | || ||| || ||||||||| |||||||| | ||||||||||||||||| ||
Sbjct: 569 gccattgggtatcgatgattggaactccgtcttctggatagcgcaccccggcgggccagc 510
Query: 187 catcctcgaccaggtggaggccaaggtcgggctggacaaggccaggatgcgcgccacccg 246
||||| ||| |||||| |||||||| ||| |||||| | |||||||||||| |
Sbjct: 509 aatccttgacatggtggaagccaaggtaaacctgaacaaggaacgaatgcgcgccaccag 450
Query: 247 ccacgtcctctccgagtacggcaacatgtccagcgcctgcgtcctcttcatcctcgacga 306
|| ||||| || || || ||||||||||| ||||| ||||| ||||||||| | |||||
Sbjct: 449 gcatgtcctttctgaatatggcaacatgtcaagcgcatgcgttctcttcatcatggacga 390
Query: 307 gatgcgcaagcgctccgccgaggacggacaggccaccacgggcgagggcctcgactgggg 366
|||||||| || ||||| ||||| || || |||| || || ||||| | ||||||||
Sbjct: 389 aatgcgcaaacggtccgctgaggatgggcacaccacaaccggagagggaatggactgggg 330
Query: 367 cgtcctcttcggcttcggcccgggactcaccgtcgagaccgtcgtgctccacagcgtccc 426
|| || |||||||| || || || |||||||||||||| ||||| ||||| ||||||||
Sbjct: 329 agttctattcggctttggtcccggcctcaccgtcgagacggtcgtcctccatagcgtccc 270
Query: 427 catcac 432
| ||||
Sbjct: 269 cgtcac 264
>emb|Y09233.1|HVCHS2 H.vulgare mRNA for homoeriodictyol/eriodictyol chalcone synthase
Length = 1493
Score = 133 bits (67), Expect = 9e-030
Identities = 337/427 (78%)
Strand = Plus / Plus
Query: 1 cctgcccgactcggagggcgccatcgacggccacctccgcgaggtggggctcaccttcca 60
|||||| || |||||||| ||||||||||||||||| |||| ||| || ||| ||||
Sbjct: 775 cctgccggagtcggagggagccatcgacggccaccttacggaggcgggcctgaccatcca 834
Query: 61 cctgctcaaggacgtgcccgggctcatctccaagaacatcggccgcgcgctggacgacgc 120
||| |||||||||||||| || |||||||| |||| |||| | || | || |||||
Sbjct: 835 ccttctcaaggacgtgccgggactcatctctgagaatatcgagcaagcattagaggacgc 894
Query: 121 gttcaagccgctcggcatctccgactggaactccatcttctgggtggcgcaccccggcgg 180
||| |||| || |||||| | |||||||||||||||||||| | || ||||| || ||
Sbjct: 895 gtttgagcctctgggcatccacaactggaactccatcttctggattgctcaccctggggg 954
Query: 181 gcccgccatcctcgaccaggtggaggccaaggtcgggctggacaaggccaggatgcgcgc 240
||| |||||||| ||| ||| |||| || || || || |||||| | ||||||||
Sbjct: 955 gcctgccatccttgacagggtcgaggacagagttggccttgacaagaagcgcatgcgcgc 1014
Query: 241 cacccgccacgtcctctccgagtacggcaacatgtccagcgcctgcgtcctcttcatcct 300
| ||| | || || || |||||||| |||||||||||||| | || |||||| ||||
Sbjct: 1015 aagccgggaggttctgtcggagtacggaaacatgtccagcgcaagtgtactcttcgtcct 1074
Query: 301 cgacgagatgcgcaagcgctccgccgaggacggacaggccaccacgggcgagggcctcga 360
|||| ||||| ||| |||||||| |||| || | ||||| || || || ||| ||
Sbjct: 1075 tgacgttatgcgtaagagctccgccaaggatggcctcgccacaactggagaaggcaagga 1134
Query: 361 ctggggcgtcctcttcggcttcggcccgggactcaccgtcgagaccgtcgtgctccacag 420
|||||| |||||||||||||||||||| || |||||||||||||| |||| ||||||||
Sbjct: 1135 ctggggtgtcctcttcggcttcggccctggcctcaccgtcgagacactcgtcctccacag 1194
Query: 421 cgtcccc 427
|||||||
Sbjct: 1195 cgtcccc 1201
>gb|AV909853.1|AV909853 AV909853 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak2d13 5', mRNA sequence
Length = 391
Score = 105 bits (53), Expect = 2e-021
Identities = 212/266 (79%)
Strand = Plus / Plus
Query: 167 gcgcaccccggcgggcccgccatcctcgaccaggtggaggccaaggtcgggctggacaag 226
|||||||||||||| || || ||||| ||| |||||| |||||||| ||| |||||
Sbjct: 3 gcgcaccccggcggnccagcaatccttgacatggtggaagccaaggtaaacctgaacaag 62
Query: 227 gccaggatgcgcgccacccgccacgtcctctccgagtacggcaacatgtccagcgcctgc 286
| | |||||||||||| | || ||||| | || || ||||||||||| ||||| |||
Sbjct: 63 gaacgaatgcgcgccaccaggcatgtcctttntgaatatggcaacatgtcaagcgcatgc 122
Query: 287 gtcctcttcatcctcgacgagatgcgcaagcgctccgccgaggacggacaggccaccacg 346
|| ||||||||| | ||||| |||||||| || ||||| ||||| || || |||| ||
Sbjct: 123 gttctcttcatcatggacgaaatgcgcaaacggtccgctgaggatgggcacaccacaacc 182
Query: 347 ggcgagggcctcgactggggcgtcctcttcggcttcggcccgggactcaccgtcgagacc 406
|| ||||| | |||||||| || || |||||||| || || || ||||||||||||||
Sbjct: 183 ggagagggaatggactggggagttctattcggctttggtcccggcctcaccgtcgagacg 242
Query: 407 gtcgtgctccacagcgtccccatcac 432
||||| ||||| ||||||||| ||||
Sbjct: 243 gtcgtnctccatagcgtccccgtcac 268
>gb|BJ458128.1|BJ458128 BJ458128 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak30m15 3', mRNA sequence
Length = 264
Score = 105 bits (53), Expect = 2e-021
Identities = 206/257 (80%)
Strand = Plus / Minus
Query: 167 gcgcaccccggcgggcccgccatcctcgaccaggtggaggccaaggtcgggctggacaag 226
||||||||||||||||| || ||||| ||| |||||| |||||||| ||| |||||
Sbjct: 257 gcgcaccccggcgggccagcaatccttgacatggtggaagccaaggtaaacctgaacaag 198
Query: 227 gccaggatgcgcgccacccgccacgtcctctccgagtacggcaacatgtccagcgcctgc 286
| | |||||||||||| | || ||||| || || || ||||||||||| ||||| |||
Sbjct: 197 gaacgaatgcgcgccaccaggcatgtcctttctgaatatggcaacatgtcaagcgcatgc 138
Query: 287 gtcctcttcatcctcgacgagatgcgcaagcgctccgccgaggacggacaggccaccacg 346
|| ||||||||| | ||||| |||||||| || ||||| ||||| || || |||| ||
Sbjct: 137 gttctcttcatcatggacgaaatgcgcaaacggtccgctgaggatgggcacaccacaacc 78
Query: 347 ggcgagggcctcgactggggcgtcctcttcggcttcggcccgggactcaccgtcgagacc 406
|| ||||| | |||||||| || || |||||||| || || || ||||||||||||||
Sbjct: 77 ggagagggaatggactggggagttctattcggctttggtcccggcctcaccgtcgagacg 18
Query: 407 gtcgtgctccacagcgt 423
||||| ||||| |||||
Sbjct: 17 gtcgtcctccatagcgt 1
>gb|BJ459861.1|BJ459861 BJ459861 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak38i19 3', mRNA sequence
Length = 288
Score = 83.8 bits (42), Expect = 8e-015
Identities = 66/74 (89%)
Strand = Plus / Minus
Query: 359 gactggggcgtcctcttcggcttcggcccgggactcaccgtcgagaccgtcgtgctccac 418
||||||||||| ||||||||||||||||| || || ||||| ||||| ||||| |||||
Sbjct: 273 gactggggcgttctcttcggcttcggccccggccttaccgtggagacggtcgttctccat 214
Query: 419 agcgtccccatcac 432
||||||||||||||
Sbjct: 213 agcgtccccatcac 200
>gb|BJ448866.1|BJ448866 BJ448866 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak21i07 5', mRNA sequence
Length = 452
Score = 77.8 bits (39), Expect = 5e-013
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 373 cttcggcttcggcccgggactcaccgtcgagaccgtcgtgctccacagcgtccccatca 431
||||||||||||||| || ||||| || ||||||||||| |||||||||||||||||||
Sbjct: 13 cttcggcttcggccccggcctcacggtggagaccgtcgtcctccacagcgtccccatca 71
>gb|BJ462004.1|BJ462004 BJ462004 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak21i07 3', mRNA sequence
Length = 407
Score = 77.8 bits (39), Expect = 5e-013
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 373 cttcggcttcggcccgggactcaccgtcgagaccgtcgtgctccacagcgtccccatca 431
||||||||||||||| || ||||| || ||||||||||| |||||||||||||||||||
Sbjct: 406 cttcggcttcggccccggcctcacggtggagaccgtcgtcctccacagcgtccccatca 348
>gb|AV911953.1|AV911953 AV911953 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak2d13 3', mRNA sequence
Length = 498
Score = 73.8 bits (37), Expect = 7e-012
Identities = 158/200 (79%)
Strand = Plus / Minus
Query: 233 atgcgcgccacccgccacgtcctctccgagtacggcaacatgtccagcgcctgcgtcctc 292
|||||||||||| | || ||||| || || || ||||||||||| ||||| ||||| ||
Sbjct: 448 atgcgcgccaccaggcatgtcctttctgaatatggcaacatgtcaagcgcatgcgttctn 389
Query: 293 ttcatcctcgacgagatgcgcaagcgctccgccgaggacggacaggccaccacgggcgag 352
|||||| | ||||| |||||||| || ||||| ||||| || || |||| || | |||
Sbjct: 388 ttcatcatggacgaaatgcgcaaacggtccgctgaggatgggcacaccacaaccgnagag 329
Query: 353 ggcctcgactggggcgtcctcttcggcttcggcccgggactcaccgtcgagaccgtcgtg 412
|| | |||||||| || || || ||||| || || || |||||||| || || |||||
Sbjct: 328 ggaatggactggggagttctattnggctttggtcccggcctcaccgtnganacggtcgtc 269
Query: 413 ctccacagcgtccccatcac 432
||||| ||||||||| ||||
Sbjct: 268 ctccatagcgtccccgtcac 249
>gb|BJ458356.1|BJ458356 BJ458356 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak31l01 3', mRNA sequence
Length = 294
Score = 60.0 bits (30), Expect = 1e-007
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 359 gactggggcgtcctcttcggcttcggcccgggactcaccgtcgagaccgtcgtgctccac 418
|||||||| || || |||||||| || || || |||||||||||||| ||||| |||||
Sbjct: 239 gactggggagttctattcggctttggtcccggcctcaccgtcgagacggtcgtcctccat 180
Query: 419 agcgtccccatcac 432
||||||||| ||||
Sbjct: 179 agcgtccccgtcac 166
>gb|BI960338.1|BI960338 HVSMEn0024E09f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0024E09f, mRNA sequence
Length = 713
Score = 38.2 bits (19), Expect = 0.41
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 357 tcgactggggcgtcctcttcggc 379
||||||| |||||||||||||||
Sbjct: 458 tcgactgcggcgtcctcttcggc 480
>gb|AL507577.1|AL507577 AL507577 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY06D18V 5',
mRNA sequence
Length = 701
Score = 36.2 bits (18), Expect = 1.6
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 25 cgacggccacctccgcga 42
||||||||||||||||||
Sbjct: 196 cgacggccacctccgcga 213
>gb|BF263243.2|BF263243 HV_CEa0006D17f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0006D17f, mRNA sequence
Length = 832
Score = 36.2 bits (18), Expect = 1.6
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 636 ttcatgcaagaccagggt 653
||||||||||||||||||
Sbjct: 576 ttcatgcaagaccagggt 593
>gb|BE455315.3|BE455315 HVSMEh0096P24f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0096P24f, mRNA sequence
Length = 773
Score = 36.2 bits (18), Expect = 1.6
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 434 accggagcggccaccgcc 451
||||||||||||||||||
Sbjct: 42 accggagcggccaccgcc 59
>gb|BE601638.3|BE601638 HVSMEh0098C12f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0098C12f, mRNA sequence
Length = 639
Score = 36.2 bits (18), Expect = 1.6
Identities = 24/26 (92%)
Strand = Plus / Plus
Query: 169 gcaccccggcgggcccgccatcctcg 194
|||| ||||||||| |||||||||||
Sbjct: 205 gcacaccggcgggctcgccatcctcg 230
>gb|BE421044.1|BE421044 HWM005.C01 ITEC HWM Barley Leaf Library Hordeum vulgare subsp.
vulgare cDNA clone HWM005.C01, mRNA sequence
Length = 1153
Score = 34.2 bits (17), Expect = 6.4
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 15 agggcgccatcgacggc 31
|||||||||||||||||
Sbjct: 308 agggcgccatcgacggc 292
>gb|BE422023.1|BE422023 HWM019cA.12r ITEC HWM Barley Leaf Library Hordeum vulgare subsp.
vulgare cDNA clone HWM019cA.12, mRNA sequence
Length = 1436
Score = 34.2 bits (17), Expect = 6.4
Identities = 20/21 (95%)
Strand = Plus / Plus
Query: 287 gtcctcttcatcctcgacgag 307
|||||||||||| ||||||||
Sbjct: 199 gtcctcttcatcgtcgacgag 219
>gb|AL507747.1|AL507747 AL507747 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY06L20V 5',
mRNA sequence
Length = 700
Score = 34.2 bits (17), Expect = 6.4
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 369 tcctcttcggcttcggc 385
|||||||||||||||||
Sbjct: 109 tcctcttcggcttcggc 125
>gb|AL511373.1|AL511373 AL511373 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY07N16u 3',
mRNA sequence
Length = 483
Score = 34.2 bits (17), Expect = 6.4
Identities = 20/21 (95%)
Strand = Plus / Minus
Query: 287 gtcctcttcatcctcgacgag 307
|||||||||||| ||||||||
Sbjct: 285 gtcctcttcatcgtcgacgag 265
>gb|AL511669.1|AL511669 AL511669 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY08N06u 3',
mRNA sequence
Length = 678
Score = 34.2 bits (17), Expect = 6.4
Identities = 20/21 (95%)
Strand = Plus / Minus
Query: 287 gtcctcttcatcctcgacgag 307
|||||||||||| ||||||||
Sbjct: 374 gtcctcttcatcgtcgacgag 354
>gb|BI780243.1|BI780243 EBma08_SQ001_N03_R maternal, 28 DPA, no treatment, cv Optic, EBma08
Hordeum vulgare subsp. vulgare cDNA clone
EBma08_SQ001_N03 5', mRNA sequence
Length = 424
Score = 34.2 bits (17), Expect = 6.4
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 619 tatctctatatatgcat 635
|||||||||||||||||
Sbjct: 355 tatctctatatatgcat 371
>gb|BE193650.1|BE193650 HVSMEh0082B15f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0082B15f, mRNA sequence
Length = 651
Score = 34.2 bits (17), Expect = 6.4
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 619 tatctctatatatgcat 635
|||||||||||||||||
Sbjct: 458 tatctctatatatgcat 474
>gb|BE194581.1|BE194581 HVSMEh0086B16f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0086B16f, mRNA sequence
Length = 604
Score = 34.2 bits (17), Expect = 6.4
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 619 tatctctatatatgcat 635
|||||||||||||||||
Sbjct: 503 tatctctatatatgcat 519
>gb|BE194851.2|BE194851 HVSMEh0087D20f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0087D20f, mRNA sequence
Length = 482
Score = 34.2 bits (17), Expect = 6.4
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 619 tatctctatatatgcat 635
|||||||||||||||||
Sbjct: 443 tatctctatatatgcat 459
>gb|BE603165.2|BE603165 HVSMEh0102F06f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0102F06f, mRNA sequence
Length = 527
Score = 34.2 bits (17), Expect = 6.4
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 619 tatctctatatatgcat 635
|||||||||||||||||
Sbjct: 450 tatctctatatatgcat 466
>gb|BG366849.1|BG366849 HVSMEi0008J23f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0008J23f, mRNA sequence
Length = 511
Score = 34.2 bits (17), Expect = 6.4
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 619 tatctctatatatgcat 635
|||||||||||||||||
Sbjct: 465 tatctctatatatgcat 481
>gb|BI947670.1|BI947670 HVSMEl0006F20f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0006F20f, mRNA sequence
Length = 589
Score = 34.2 bits (17), Expect = 6.4
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 619 tatctctatatatgcat 635
|||||||||||||||||
Sbjct: 469 tatctctatatatgcat 485
>gb|BI948087.1|BI948087 HVSMEl0008C12f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0008C12f, mRNA sequence
Length = 891
Score = 34.2 bits (17), Expect = 6.4
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 619 tatctctatatatgcat 635
|||||||||||||||||
Sbjct: 468 tatctctatatatgcat 484
>gb|BI948592.1|BI948592 HVSMEl0010C24f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0010C24f, mRNA sequence
Length = 965
Score = 34.2 bits (17), Expect = 6.4
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 619 tatctctatatatgcat 635
|||||||||||||||||
Sbjct: 468 tatctctatatatgcat 484
>gb|BI950011.1|BI950011 HVSMEl0017L12f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0017L12f, mRNA sequence
Length = 478
Score = 34.2 bits (17), Expect = 6.4
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 619 tatctctatatatgcat 635
|||||||||||||||||
Sbjct: 459 tatctctatatatgcat 475
>gb|BI950101.1|BI950101 HVSMEl0018L04f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0018L04f, mRNA sequence
Length = 556
Score = 34.2 bits (17), Expect = 6.4
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 619 tatctctatatatgcat 635
|||||||||||||||||
Sbjct: 468 tatctctatatatgcat 484
>gb|BI950723.1|BI950723 HVSMEl0022O16f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0022O16f, mRNA sequence
Length = 910
Score = 34.2 bits (17), Expect = 6.4
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 619 tatctctatatatgcat 635
|||||||||||||||||
Sbjct: 469 tatctctatatatgcat 485
>gb|BI952548.1|BI952548 HVSMEm0006O12f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0006O12f, mRNA sequence
Length = 864
Score = 34.2 bits (17), Expect = 6.4
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 15 agggcgccatcgacggc 31
|||||||||||||||||
Sbjct: 465 agggcgccatcgacggc 449
>gb|BI952738.1|BI952738 HVSMEm0007J15f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0007J15f, mRNA sequence
Length = 567
Score = 34.2 bits (17), Expect = 6.4
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 619 tatctctatatatgcat 635
|||||||||||||||||
Sbjct: 470 tatctctatatatgcat 486
>gb|BI957223.1|BI957223 HVSMEn0008D14f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0008D14f, mRNA sequence
Length = 605
Score = 34.2 bits (17), Expect = 6.4
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 335 caggccaccacgggcga 351
|||||||||||||||||
Sbjct: 561 caggccaccacgggcga 545
>gb|BE216013.1|BE216013 HV_CEb0009C01f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0009C01f, mRNA sequence
Length = 665
Score = 34.2 bits (17), Expect = 6.4
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 123 tcaagccgctcggcatc 139
|||||||||||||||||
Sbjct: 495 tcaagccgctcggcatc 511
>gb|BI959009.1|BI959009 HVSMEn0017L03f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0017L03f, mRNA sequence
Length = 644
Score = 34.2 bits (17), Expect = 6.4
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 15 agggcgccatcgacggc 31
|||||||||||||||||
Sbjct: 195 agggcgccatcgacggc 179
>gb|BE194144.2|BE194144 HVSMEh0084E04f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0084E04f, mRNA sequence
Length = 570
Score = 34.2 bits (17), Expect = 6.4
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 619 tatctctatatatgcat 635
|||||||||||||||||
Sbjct: 475 tatctctatatatgcat 491
>gb|BE601663.2|BE601663 HVSMEh0099B19f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0099B19f, mRNA sequence
Length = 608
Score = 34.2 bits (17), Expect = 6.4
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 619 tatctctatatatgcat 635
|||||||||||||||||
Sbjct: 467 tatctctatatatgcat 483
>gb|AW983124.3|AW983124 HVSMEg0008E05f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0008E05f, mRNA sequence
Length = 806
Score = 34.2 bits (17), Expect = 6.4
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 15 agggcgccatcgacggc 31
|||||||||||||||||
Sbjct: 371 agggcgccatcgacggc 355
>gb|BE194290.3|BE194290 HVSMEh0085A11f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0085A11f, mRNA sequence
Length = 558
Score = 34.2 bits (17), Expect = 6.4
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 619 tatctctatatatgcat 635
|||||||||||||||||
Sbjct: 472 tatctctatatatgcat 488
>gb|BE195426.3|BE195426 HVSMEh0089J14f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0089J14f, mRNA sequence
Length = 583
Score = 34.2 bits (17), Expect = 6.4
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 619 tatctctatatatgcat 635
|||||||||||||||||
Sbjct: 468 tatctctatatatgcat 484
>gb|BE602368.3|BE602368 HVSMEh0098K09f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0098K09f, mRNA sequence
Length = 706
Score = 34.2 bits (17), Expect = 6.4
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 619 tatctctatatatgcat 635
|||||||||||||||||
Sbjct: 459 tatctctatatatgcat 475
>gb|BE601817.3|BE601817 HVSMEh0099K10f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0099K10f, mRNA sequence
Length = 706
Score = 34.2 bits (17), Expect = 6.4
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 619 tatctctatatatgcat 635
|||||||||||||||||
Sbjct: 459 tatctctatatatgcat 475
>gb|BE602683.3|BE602683 HVSMEh0101C09f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0101C09f, mRNA sequence
Length = 549
Score = 34.2 bits (17), Expect = 6.4
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 619 tatctctatatatgcat 635
|||||||||||||||||
Sbjct: 463 tatctctatatatgcat 479
>gb|BE602753.3|BE602753 HVSMEh0101I09f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0101I09f, mRNA sequence
Length = 549
Score = 34.2 bits (17), Expect = 6.4
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 619 tatctctatatatgcat 635
|||||||||||||||||
Sbjct: 463 tatctctatatatgcat 479
>gb|BE603087.3|BE603087 HVSMEh0101N21f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0101N21f, mRNA sequence
Length = 550
Score = 34.2 bits (17), Expect = 6.4
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 619 tatctctatatatgcat 635
|||||||||||||||||
Sbjct: 468 tatctctatatatgcat 484
>gb|BE602039.3|BE602039 HVSMEh0102C10f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0102C10f, mRNA sequence
Length = 458
Score = 34.2 bits (17), Expect = 6.4
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 619 tatctctatatatgcat 635
|||||||||||||||||
Sbjct: 371 tatctctatatatgcat 387
>gb|BE602064.3|BE602064 HVSMEh0102E12f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0102E12f, mRNA sequence
Length = 749
Score = 34.2 bits (17), Expect = 6.4
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 619 tatctctatatatgcat 635
|||||||||||||||||
Sbjct: 458 tatctctatatatgcat 474
>gb|BG366194.2|BG366194 HVSMEi0006D04f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0006D04f, mRNA sequence
Length = 573
Score = 34.2 bits (17), Expect = 6.4
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 619 tatctctatatatgcat 635
|||||||||||||||||
Sbjct: 466 tatctctatatatgcat 482
>gb|BG367836.2|BG367836 HVSMEi0013O09f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0013O09f, mRNA sequence
Length = 710
Score = 34.2 bits (17), Expect = 6.4
Identities = 20/21 (95%)
Strand = Plus / Minus
Query: 421 cgtccccatcaccaccggagc 441
|||| ||||||||||||||||
Sbjct: 95 cgtcaccatcaccaccggagc 75
>gb|BG368457.2|BG368457 HVSMEi0019A16f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0019A16f, mRNA sequence
Length = 559
Score = 34.2 bits (17), Expect = 6.4
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 619 tatctctatatatgcat 635
|||||||||||||||||
Sbjct: 468 tatctctatatatgcat 484
>gb|BG418255.2|BG418255 HVSMEk0022B17f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0022B17f, mRNA sequence
Length = 572
Score = 34.2 bits (17), Expect = 6.4
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 619 tatctctatatatgcat 635
|||||||||||||||||
Sbjct: 458 tatctctatatatgcat 474
>gb|AV932074.1|AV932074 AV932074 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal2c19 5', mRNA sequence
Length = 517
Score = 34.2 bits (17), Expect = 6.4
Identities = 20/21 (95%)
Strand = Plus / Plus
Query: 287 gtcctcttcatcctcgacgag 307
|||||||||||| ||||||||
Sbjct: 242 gtcctcttcatcgtcgacgag 262
>gb|AV933019.1|AV933019 AV933019 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal5a23 5', mRNA sequence
Length = 494
Score = 34.2 bits (17), Expect = 6.4
Identities = 20/21 (95%)
Strand = Plus / Plus
Query: 287 gtcctcttcatcctcgacgag 307
|||||||||||| ||||||||
Sbjct: 219 gtcctcttcatcgtcgacgag 239
>gb|AV933111.1|AV933111 AV933111 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal5g10 5', mRNA sequence
Length = 516
Score = 34.2 bits (17), Expect = 6.4
Identities = 20/21 (95%)
Strand = Plus / Plus
Query: 287 gtcctcttcatcctcgacgag 307
|||||||||||| ||||||||
Sbjct: 241 gtcctcttcatcgtcgacgag 261
>gb|AV934035.1|AV934035 AV934035 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baalm17 5', mRNA sequence
Length = 498
Score = 34.2 bits (17), Expect = 6.4
Identities = 20/21 (95%)
Strand = Plus / Plus
Query: 287 gtcctcttcatcctcgacgag 307
|||||||||||| ||||||||
Sbjct: 223 gtcctcttcatcgtcgacgag 243
>gb|AV934036.1|AV934036 AV934036 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baalm18 5', mRNA sequence
Length = 459
Score = 34.2 bits (17), Expect = 6.4
Identities = 20/21 (95%)
Strand = Plus / Plus
Query: 287 gtcctcttcatcctcgacgag 307
|||||||||||| ||||||||
Sbjct: 184 gtcctcttcatcgtcgacgag 204
>gb|AV934921.1|AV934921 AV934921 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal2c19 3', mRNA sequence
Length = 502
Score = 34.2 bits (17), Expect = 6.4
Identities = 20/21 (95%)
Strand = Plus / Minus
Query: 287 gtcctcttcatcctcgacgag 307
|||||||||||| ||||||||
Sbjct: 262 gtcctcttcatcgtcgacgag 242
>gb|AV936286.1|AV936286 AV936286 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal10m17 3', mRNA sequence
Length = 482
Score = 34.2 bits (17), Expect = 6.4
Identities = 20/21 (95%)
Strand = Plus / Minus
Query: 287 gtcctcttcatcctcgacgag 307
|||||||||||| ||||||||
Sbjct: 242 gtcctcttcatcgtcgacgag 222
>gb|AV936591.1|AV936591 AV936591 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal5a23 3', mRNA sequence
Length = 501
Score = 34.2 bits (17), Expect = 6.4
Identities = 20/21 (95%)
Strand = Plus / Minus
Query: 287 gtcctcttcatcctcgacgag 307
|||||||||||| ||||||||
Sbjct: 261 gtcctcttcatcgtcgacgag 241
>gb|AV936668.1|AV936668 AV936668 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal5g10 3', mRNA sequence
Length = 499
Score = 34.2 bits (17), Expect = 6.4
Identities = 20/21 (95%)
Strand = Plus / Minus
Query: 287 gtcctcttcatcctcgacgag 307
|||||||||||| ||||||||
Sbjct: 259 gtcctcttcatcgtcgacgag 239
>gb|AJ433814.1|AJ433814 AJ433814 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200066C06F1, mRNA sequence
Length = 411
Score = 34.2 bits (17), Expect = 6.4
Identities = 20/21 (95%)
Strand = Plus / Plus
Query: 287 gtcctcttcatcctcgacgag 307
|||||||||||| ||||||||
Sbjct: 113 gtcctcttcatcgtcgacgag 133
>gb|BJ468946.1|BJ468946 BJ468946 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal12c01 5', mRNA sequence
Length = 460
Score = 34.2 bits (17), Expect = 6.4
Identities = 20/21 (95%)
Strand = Plus / Plus
Query: 287 gtcctcttcatcctcgacgag 307
|||||||||||| ||||||||
Sbjct: 240 gtcctcttcatcgtcgacgag 260
>gb|BJ469767.1|BJ469767 BJ469767 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal37h04 5', mRNA sequence
Length = 536
Score = 34.2 bits (17), Expect = 6.4
Identities = 20/21 (95%)
Strand = Plus / Plus
Query: 287 gtcctcttcatcctcgacgag 307
|||||||||||| ||||||||
Sbjct: 261 gtcctcttcatcgtcgacgag 281
>gb|BJ469777.1|BJ469777 BJ469777 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal37h24 5', mRNA sequence
Length = 536
Score = 34.2 bits (17), Expect = 6.4
Identities = 20/21 (95%)
Strand = Plus / Plus
Query: 287 gtcctcttcatcctcgacgag 307
|||||||||||| ||||||||
Sbjct: 261 gtcctcttcatcgtcgacgag 281
>gb|BJ470705.1|BJ470705 BJ470705 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal26a23 5', mRNA sequence
Length = 493
Score = 34.2 bits (17), Expect = 6.4
Identities = 20/21 (95%)
Strand = Plus / Plus
Query: 287 gtcctcttcatcctcgacgag 307
|||||||||||| ||||||||
Sbjct: 218 gtcctcttcatcgtcgacgag 238
>gb|BJ470747.1|BJ470747 BJ470747 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal26g07 5', mRNA sequence
Length = 509
Score = 34.2 bits (17), Expect = 6.4
Identities = 20/21 (95%)
Strand = Plus / Plus
Query: 287 gtcctcttcatcctcgacgag 307
|||||||||||| ||||||||
Sbjct: 239 gtcctcttcatcgtcgacgag 259
>gb|BJ471100.1|BJ471100 BJ471100 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal30l22 5', mRNA sequence
Length = 517
Score = 34.2 bits (17), Expect = 6.4
Identities = 20/21 (95%)
Strand = Plus / Plus
Query: 287 gtcctcttcatcctcgacgag 307
|||||||||||| ||||||||
Sbjct: 242 gtcctcttcatcgtcgacgag 262
>gb|BJ471232.1|BJ471232 BJ471232 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal17f24 5', mRNA sequence
Length = 516
Score = 34.2 bits (17), Expect = 6.4
Identities = 20/21 (95%)
Strand = Plus / Plus
Query: 287 gtcctcttcatcctcgacgag 307
|||||||||||| ||||||||
Sbjct: 241 gtcctcttcatcgtcgacgag 261
>gb|BJ471330.1|BJ471330 BJ471330 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal17n17 5', mRNA sequence
Length = 516
Score = 34.2 bits (17), Expect = 6.4
Identities = 20/21 (95%)
Strand = Plus / Plus
Query: 287 gtcctcttcatcctcgacgag 307
|||||||||||| ||||||||
Sbjct: 241 gtcctcttcatcgtcgacgag 261
>gb|BJ471331.1|BJ471331 BJ471331 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal17n18 5', mRNA sequence
Length = 516
Score = 34.2 bits (17), Expect = 6.4
Identities = 20/21 (95%)
Strand = Plus / Plus
Query: 287 gtcctcttcatcctcgacgag 307
|||||||||||| ||||||||
Sbjct: 241 gtcctcttcatcgtcgacgag 261
>gb|BJ471782.1|BJ471782 BJ471782 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal21j20 5', mRNA sequence
Length = 527
Score = 34.2 bits (17), Expect = 6.4
Identities = 20/21 (95%)
Strand = Plus / Plus
Query: 287 gtcctcttcatcctcgacgag 307
|||||||||||| ||||||||
Sbjct: 252 gtcctcttcatcgtcgacgag 272
>gb|BJ471823.1|BJ471823 BJ471823 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal21n20 5', mRNA sequence
Length = 535
Score = 34.2 bits (17), Expect = 6.4
Identities = 20/21 (95%)
Strand = Plus / Plus
Query: 287 gtcctcttcatcctcgacgag 307
|||||||||||| ||||||||
Sbjct: 260 gtcctcttcatcgtcgacgag 280
>gb|BJ472290.1|BJ472290 BJ472290 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal33f18 5', mRNA sequence
Length = 516
Score = 34.2 bits (17), Expect = 6.4
Identities = 20/21 (95%)
Strand = Plus / Plus
Query: 287 gtcctcttcatcctcgacgag 307
|||||||||||| ||||||||
Sbjct: 241 gtcctcttcatcgtcgacgag 261
>gb|BJ473077.1|BJ473077 BJ473077 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal40n16 5', mRNA sequence
Length = 516
Score = 34.2 bits (17), Expect = 6.4
Identities = 20/21 (95%)
Strand = Plus / Plus
Query: 287 gtcctcttcatcctcgacgag 307
|||||||||||| ||||||||
Sbjct: 241 gtcctcttcatcgtcgacgag 261
>gb|BJ473258.1|BJ473258 BJ473258 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal41g04 5', mRNA sequence
Length = 516
Score = 34.2 bits (17), Expect = 6.4
Identities = 20/21 (95%)
Strand = Plus / Plus
Query: 287 gtcctcttcatcctcgacgag 307
|||||||||||| ||||||||
Sbjct: 241 gtcctcttcatcgtcgacgag 261
>gb|BJ473367.1|BJ473367 BJ473367 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal12c01 3', mRNA sequence
Length = 501
Score = 34.2 bits (17), Expect = 6.4
Identities = 20/21 (95%)
Strand = Plus / Minus
Query: 287 gtcctcttcatcctcgacgag 307
|||||||||||| ||||||||
Sbjct: 261 gtcctcttcatcgtcgacgag 241
>gb|BJ473855.1|BJ473855 BJ473855 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal17f24 3', mRNA sequence
Length = 502
Score = 34.2 bits (17), Expect = 6.4
Identities = 20/21 (95%)
Strand = Plus / Minus
Query: 287 gtcctcttcatcctcgacgag 307
|||||||||||| ||||||||
Sbjct: 262 gtcctcttcatcgtcgacgag 242
>gb|BJ473947.1|BJ473947 BJ473947 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal17n18 3', mRNA sequence
Length = 496
Score = 34.2 bits (17), Expect = 6.4
Identities = 20/21 (95%)
Strand = Plus / Minus
Query: 287 gtcctcttcatcctcgacgag 307
|||||||||||| ||||||||
Sbjct: 256 gtcctcttcatcgtcgacgag 236
>gb|BJ475166.1|BJ475166 BJ475166 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal21n20 3', mRNA sequence
Length = 495
Score = 34.2 bits (17), Expect = 6.4
Identities = 20/21 (95%)
Strand = Plus / Minus
Query: 287 gtcctcttcatcctcgacgag 307
|||||||||||| ||||||||
Sbjct: 255 gtcctcttcatcgtcgacgag 235
>gb|BJ475554.1|BJ475554 BJ475554 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal26g07 3', mRNA sequence
Length = 490
Score = 34.2 bits (17), Expect = 6.4
Identities = 20/21 (95%)
Strand = Plus / Minus
Query: 287 gtcctcttcatcctcgacgag 307
|||||||||||| ||||||||
Sbjct: 250 gtcctcttcatcgtcgacgag 230
>gb|BJ475950.1|BJ475950 BJ475950 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal30l22 3', mRNA sequence
Length = 501
Score = 34.2 bits (17), Expect = 6.4
Identities = 20/21 (95%)
Strand = Plus / Minus
Query: 287 gtcctcttcatcctcgacgag 307
|||||||||||| ||||||||
Sbjct: 261 gtcctcttcatcgtcgacgag 241
>gb|BJ476287.1|BJ476287 BJ476287 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal33f18 3', mRNA sequence
Length = 479
Score = 34.2 bits (17), Expect = 6.4
Identities = 20/21 (95%)
Strand = Plus / Minus
Query: 287 gtcctcttcatcctcgacgag 307
|||||||||||| ||||||||
Sbjct: 239 gtcctcttcatcgtcgacgag 219
>gb|BJ476858.1|BJ476858 BJ476858 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal37h04 3', mRNA sequence
Length = 491
Score = 34.2 bits (17), Expect = 6.4
Identities = 20/21 (95%)
Strand = Plus / Minus
Query: 287 gtcctcttcatcctcgacgag 307
|||||||||||| ||||||||
Sbjct: 251 gtcctcttcatcgtcgacgag 231
>gb|BJ476867.1|BJ476867 BJ476867 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal37h24 3', mRNA sequence
Length = 489
Score = 34.2 bits (17), Expect = 6.4
Identities = 20/21 (95%)
Strand = Plus / Minus
Query: 287 gtcctcttcatcctcgacgag 307
|||||||||||| ||||||||
Sbjct: 249 gtcctcttcatcgtcgacgag 229
>gb|BJ477253.1|BJ477253 BJ477253 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal40n16 3', mRNA sequence
Length = 491
Score = 34.2 bits (17), Expect = 6.4
Identities = 20/21 (95%)
Strand = Plus / Minus
Query: 287 gtcctcttcatcctcgacgag 307
|||||||||||| ||||||||
Sbjct: 251 gtcctcttcatcgtcgacgag 231
>gb|BJ477437.1|BJ477437 BJ477437 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal41g04 3', mRNA sequence
Length = 489
Score = 34.2 bits (17), Expect = 6.4
Identities = 20/21 (95%)
Strand = Plus / Minus
Query: 287 gtcctcttcatcctcgacgag 307
|||||||||||| ||||||||
Sbjct: 262 gtcctcttcatcgtcgacgag 242
>gb|BQ459928.1|BQ459928 HA07L03r HA Hordeum vulgare subsp. vulgare cDNA clone HA07L03
5-PRIME, mRNA sequence
Length = 614
Score = 34.2 bits (17), Expect = 6.4
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 334 acaggccaccacgggcg 350
|||||||||||||||||
Sbjct: 287 acaggccaccacgggcg 303
>gb|BQ472893.1|BQ472893 HB01C23r BC Hordeum vulgare subsp. vulgare cDNA clone HB01C23
5-PRIME, mRNA sequence
Length = 534
Score = 34.2 bits (17), Expect = 6.4
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 619 tatctctatatatgcat 635
|||||||||||||||||
Sbjct: 475 tatctctatatatgcat 491
>gb|BM441868.2|BM441868 EBed07_SQ001_M11_R endosperm, 28 DPA, no treatment, cv Optic,
EBed07 Hordeum vulgare subsp. vulgare cDNA clone
EBed07_SQ001_M11 5', mRNA sequence
Length = 465
Score = 34.2 bits (17), Expect = 6.4
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 619 tatctctatatatgcat 635
|||||||||||||||||
Sbjct: 385 tatctctatatatgcat 401
>gb|BM441936.2|BM441936 EBed07_SQ001_P14_R endosperm, 28 DPA, no treatment, cv Optic,
EBed07 Hordeum vulgare subsp. vulgare cDNA clone
EBed07_SQ001_P14 5', mRNA sequence
Length = 491
Score = 34.2 bits (17), Expect = 6.4
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 619 tatctctatatatgcat 635
|||||||||||||||||
Sbjct: 421 tatctctatatatgcat 437
>gb|BI780947.2|BI780947 EBma05_SQ001_J22_R maternal, 12 DPA, no treatment, cv Optic, EBma05
Hordeum vulgare subsp. vulgare cDNA clone
EBma05_SQ001_J22 5', mRNA sequence
Length = 552
Score = 34.2 bits (17), Expect = 6.4
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 619 tatctctatatatgcat 635
|||||||||||||||||
Sbjct: 470 tatctctatatatgcat 486
>gb|BI780124.2|BI780124 EBma08_SQ001_H14_R maternal, 28 DPA, no treatment, cv Optic, EBma08
Hordeum vulgare subsp. vulgare cDNA clone
EBma08_SQ001_H14 5', mRNA sequence
Length = 553
Score = 34.2 bits (17), Expect = 6.4
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 619 tatctctatatatgcat 635
|||||||||||||||||
Sbjct: 475 tatctctatatatgcat 491
>gb|BI780152.2|BI780152 EBma08_SQ001_I21_R maternal, 28 DPA, no treatment, cv Optic, EBma08
Hordeum vulgare subsp. vulgare cDNA clone
EBma08_SQ001_I21 5', mRNA sequence
Length = 545
Score = 34.2 bits (17), Expect = 6.4
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 619 tatctctatatatgcat 635
|||||||||||||||||
Sbjct: 465 tatctctatatatgcat 481
>gb|BI780227.2|BI780227 EBma08_SQ001_M08_R maternal, 28 DPA, no treatment, cv Optic, EBma08
Hordeum vulgare subsp. vulgare cDNA clone
EBma08_SQ001_M08 5', mRNA sequence
Length = 455
Score = 34.2 bits (17), Expect = 6.4
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 619 tatctctatatatgcat 635
|||||||||||||||||
Sbjct: 373 tatctctatatatgcat 389
>gb|BI780236.2|BI780236 EBma08_SQ001_M19_R maternal, 28 DPA, no treatment, cv Optic, EBma08
Hordeum vulgare subsp. vulgare cDNA clone
EBma08_SQ001_M19 5', mRNA sequence
Length = 533
Score = 34.2 bits (17), Expect = 6.4
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 619 tatctctatatatgcat 635
|||||||||||||||||
Sbjct: 475 tatctctatatatgcat 491
>gb|BM096881.2|BM096881 EBma08_SQ001_O08_R maternal, 28 DPA, no treatment, cv Optic, EBma08
Hordeum vulgare subsp. vulgare cDNA clone
EBma08_SQ001_O08 5', mRNA sequence
Length = 551
Score = 34.2 bits (17), Expect = 6.4
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 619 tatctctatatatgcat 635
|||||||||||||||||
Sbjct: 471 tatctctatatatgcat 487
>gb|BM371474.2|BM371474 EBma08_SQ002_N23_R maternal, 28 DPA, no treatment, cv Optic, EBma08
Hordeum vulgare subsp. vulgare cDNA clone
EBma08_SQ002_N23 5', mRNA sequence
Length = 477
Score = 34.2 bits (17), Expect = 6.4
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 619 tatctctatatatgcat 635
|||||||||||||||||
Sbjct: 458 tatctctatatatgcat 474
>gb|BM371840.2|BM371840 EBma08_SQ004_C07_R maternal, 28 DPA, no treatment, cv Optic, EBma08
Hordeum vulgare subsp. vulgare cDNA clone
EBma08_SQ004_C07 5', mRNA sequence
Length = 474
Score = 34.2 bits (17), Expect = 6.4
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 619 tatctctatatatgcat 635
|||||||||||||||||
Sbjct: 448 tatctctatatatgcat 464
>gb|BQ755446.1|BQ755446 EBed07_SQ002_K15_R endosperm, 28 DPA, no treatment, cv Optic,
EBed07 Hordeum vulgare subsp. vulgare cDNA clone
EBed07_SQ002_K15 5', mRNA sequence
Length = 538
Score = 34.2 bits (17), Expect = 6.4
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 619 tatctctatatatgcat 635
|||||||||||||||||
Sbjct: 469 tatctctatatatgcat 485
>gb|BQ755600.1|BQ755600 EBed07_SQ003_G02_R endosperm, 28 DPA, no treatment, cv Optic,
EBed07 Hordeum vulgare subsp. vulgare cDNA clone
EBed07_SQ003_G02 5', mRNA sequence
Length = 517
Score = 34.2 bits (17), Expect = 6.4
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 619 tatctctatatatgcat 635
|||||||||||||||||
Sbjct: 458 tatctctatatatgcat 474
>gb|BQ755759.1|BQ755759 EBed07_SQ003_C16_R endosperm, 28 DPA, no treatment, cv Optic,
EBed07 Hordeum vulgare subsp. vulgare cDNA clone
EBed07_SQ003_C16 5', mRNA sequence
Length = 510
Score = 34.2 bits (17), Expect = 6.4
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 619 tatctctatatatgcat 635
|||||||||||||||||
Sbjct: 459 tatctctatatatgcat 475
>gb|BQ758561.1|BQ758561 EBma07_SQ002_J03_R maternal, 21 DPA, no treatment, cv Optic, EBma07
Hordeum vulgare subsp. vulgare cDNA clone
EBma07_SQ002_J03 5', mRNA sequence
Length = 534
Score = 34.2 bits (17), Expect = 6.4
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 619 tatctctatatatgcat 635
|||||||||||||||||
Sbjct: 467 tatctctatatatgcat 483
>gb|BQ758642.1|BQ758642 EBma07_SQ002_J10_R maternal, 21 DPA, no treatment, cv Optic, EBma07
Hordeum vulgare subsp. vulgare cDNA clone
EBma07_SQ002_J10 5', mRNA sequence
Length = 512
Score = 34.2 bits (17), Expect = 6.4
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 619 tatctctatatatgcat 635
|||||||||||||||||
Sbjct: 459 tatctctatatatgcat 475
>gb|BQ758688.1|BQ758688 EBma07_SQ002_D13_R maternal, 21 DPA, no treatment, cv Optic, EBma07
Hordeum vulgare subsp. vulgare cDNA clone
EBma07_SQ002_D13 5', mRNA sequence
Length = 499
Score = 34.2 bits (17), Expect = 6.4
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 619 tatctctatatatgcat 635
|||||||||||||||||
Sbjct: 469 tatctctatatatgcat 485
>gb|BQ758852.1|BQ758852 EBma07_SQ003_D01_R maternal, 21 DPA, no treatment, cv Optic, EBma07
Hordeum vulgare subsp. vulgare cDNA clone
EBma07_SQ003_D01 5', mRNA sequence
Length = 495
Score = 34.2 bits (17), Expect = 6.4
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 619 tatctctatatatgcat 635
|||||||||||||||||
Sbjct: 464 tatctctatatatgcat 480
>gb|BQ758881.1|BQ758881 EBma07_SQ003_I02_R maternal, 21 DPA, no treatment, cv Optic, EBma07
Hordeum vulgare subsp. vulgare cDNA clone
EBma07_SQ003_I02 5', mRNA sequence
Length = 562
Score = 34.2 bits (17), Expect = 6.4
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 619 tatctctatatatgcat 635
|||||||||||||||||
Sbjct: 468 tatctctatatatgcat 484
>gb|BQ759064.1|BQ759064 EBma07_SQ003_M14_R maternal, 21 DPA, no treatment, cv Optic, EBma07
Hordeum vulgare subsp. vulgare cDNA clone
EBma07_SQ003_M14 5', mRNA sequence
Length = 526
Score = 34.2 bits (17), Expect = 6.4
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 619 tatctctatatatgcat 635
|||||||||||||||||
Sbjct: 459 tatctctatatatgcat 475
>gb|BU966793.1|BU966793 HB02G04r BC Hordeum vulgare subsp. vulgare cDNA clone HB02G04
5-PRIME, mRNA sequence
Length = 488
Score = 34.2 bits (17), Expect = 6.4
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 334 acaggccaccacgggcg 350
|||||||||||||||||
Sbjct: 291 acaggccaccacgggcg 307
>gb|BU967149.1|BU967149 HB03G23r BC Hordeum vulgare subsp. vulgare cDNA clone HB03G23
5-PRIME, mRNA sequence
Length = 527
Score = 34.2 bits (17), Expect = 6.4
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 619 tatctctatatatgcat 635
|||||||||||||||||
Sbjct: 468 tatctctatatatgcat 484
>gb|BU970256.1|BU970256 HB14B20r BC Hordeum vulgare subsp. vulgare cDNA clone HB14B20
5-PRIME, mRNA sequence
Length = 527
Score = 34.2 bits (17), Expect = 6.4
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 619 tatctctatatatgcat 635
|||||||||||||||||
Sbjct: 468 tatctctatatatgcat 484
>gb|BU971943.1|BU971943 HB20C06r BC Hordeum vulgare subsp. vulgare cDNA clone HB20C06
5-PRIME, mRNA sequence
Length = 539
Score = 34.2 bits (17), Expect = 6.4
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 619 tatctctatatatgcat 635
|||||||||||||||||
Sbjct: 480 tatctctatatatgcat 496
>gb|BU972277.1|BU972277 HB21D02r BC Hordeum vulgare subsp. vulgare cDNA clone HB21D02
5-PRIME, mRNA sequence
Length = 532
Score = 34.2 bits (17), Expect = 6.4
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 619 tatctctatatatgcat 635
|||||||||||||||||
Sbjct: 475 tatctctatatatgcat 491
>gb|BU972840.1|BU972840 HB22O02r BC Hordeum vulgare subsp. vulgare cDNA clone HB22O02
5-PRIME, mRNA sequence
Length = 538
Score = 34.2 bits (17), Expect = 6.4
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 619 tatctctatatatgcat 635
|||||||||||||||||
Sbjct: 479 tatctctatatatgcat 495
>gb|BU972847.1|BU972847 HB22O10r BC Hordeum vulgare subsp. vulgare cDNA clone HB22O10
5-PRIME, mRNA sequence
Length = 532
Score = 34.2 bits (17), Expect = 6.4
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 619 tatctctatatatgcat 635
|||||||||||||||||
Sbjct: 473 tatctctatatatgcat 489
>gb|BU973152.1|BU973152 HB23O19r BC Hordeum vulgare subsp. vulgare cDNA clone HB23O19
5-PRIME, mRNA sequence
Length = 501
Score = 34.2 bits (17), Expect = 6.4
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 619 tatctctatatatgcat 635
|||||||||||||||||
Sbjct: 475 tatctctatatatgcat 491
>gb|BU973433.1|BU973433 HB24O23r BC Hordeum vulgare subsp. vulgare cDNA clone HB24O23
5-PRIME, mRNA sequence
Length = 538
Score = 34.2 bits (17), Expect = 6.4
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 619 tatctctatatatgcat 635
|||||||||||||||||
Sbjct: 479 tatctctatatatgcat 495
>gb|BU973836.1|BU973836 HB26B20r BC Hordeum vulgare subsp. vulgare cDNA clone HB26B20
5-PRIME, mRNA sequence
Length = 513
Score = 34.2 bits (17), Expect = 6.4
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 619 tatctctatatatgcat 635
|||||||||||||||||
Sbjct: 483 tatctctatatatgcat 499
>gb|BU984334.1|BU984334 HF03K08r HF Hordeum vulgare subsp. vulgare cDNA clone HF03K08
5-PRIME, mRNA sequence
Length = 527
Score = 34.2 bits (17), Expect = 6.4
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 619 tatctctatatatgcat 635
|||||||||||||||||
Sbjct: 468 tatctctatatatgcat 484
>gb|BU984591.1|BU984591 HF04G05r HF Hordeum vulgare subsp. vulgare cDNA clone HF04G05
5-PRIME, mRNA sequence
Length = 530
Score = 34.2 bits (17), Expect = 6.4
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 619 tatctctatatatgcat 635
|||||||||||||||||
Sbjct: 471 tatctctatatatgcat 487
>gb|BU985194.1|BU985194 HF06G14r HF Hordeum vulgare subsp. vulgare cDNA clone HF06G14
5-PRIME, mRNA sequence
Length = 522
Score = 34.2 bits (17), Expect = 6.4
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 619 tatctctatatatgcat 635
|||||||||||||||||
Sbjct: 463 tatctctatatatgcat 479
>gb|BU986179.1|BU986179 HF09O14r HF Hordeum vulgare subsp. vulgare cDNA clone HF09O14
5-PRIME, mRNA sequence
Length = 498
Score = 34.2 bits (17), Expect = 6.4
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 619 tatctctatatatgcat 635
|||||||||||||||||
Sbjct: 475 tatctctatatatgcat 491
>gb|BU987018.1|BU987018 HF13J06r HF Hordeum vulgare subsp. vulgare cDNA clone HF13J06
5-PRIME, mRNA sequence
Length = 424
Score = 34.2 bits (17), Expect = 6.4
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 619 tatctctatatatgcat 635
|||||||||||||||||
Sbjct: 365 tatctctatatatgcat 381
>gb|BU987439.1|BU987439 HF14M05r HF Hordeum vulgare subsp. vulgare cDNA clone HF14M05
5-PRIME, mRNA sequence
Length = 425
Score = 34.2 bits (17), Expect = 6.4
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 619 tatctctatatatgcat 635
|||||||||||||||||
Sbjct: 366 tatctctatatatgcat 382
>gb|BU987631.1|BU987631 HF15E22r HF Hordeum vulgare subsp. vulgare cDNA clone HF15E22
5-PRIME, mRNA sequence
Length = 537
Score = 34.2 bits (17), Expect = 6.4
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 619 tatctctatatatgcat 635
|||||||||||||||||
Sbjct: 478 tatctctatatatgcat 494
>gb|BU987866.1|BU987866 HF15P22r HF Hordeum vulgare subsp. vulgare cDNA clone HF15P22
5-PRIME, mRNA sequence
Length = 522
Score = 34.2 bits (17), Expect = 6.4
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 619 tatctctatatatgcat 635
|||||||||||||||||
Sbjct: 463 tatctctatatatgcat 479
>gb|BU988329.1|BU988329 HF17F04r HF Hordeum vulgare subsp. vulgare cDNA clone HF17F04
5-PRIME, mRNA sequence
Length = 526
Score = 34.2 bits (17), Expect = 6.4
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 619 tatctctatatatgcat 635
|||||||||||||||||
Sbjct: 467 tatctctatatatgcat 483
>gb|BU988853.1|BU988853 HF18O15r HF Hordeum vulgare subsp. vulgare cDNA clone HF18O15
5-PRIME, mRNA sequence
Length = 518
Score = 34.2 bits (17), Expect = 6.4
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 619 tatctctatatatgcat 635
|||||||||||||||||
Sbjct: 456 tatctctatatatgcat 472
>gb|BU988982.1|BU988982 HF19G04r HF Hordeum vulgare subsp. vulgare cDNA clone HF19G04
5-PRIME, mRNA sequence
Length = 537
Score = 34.2 bits (17), Expect = 6.4
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 619 tatctctatatatgcat 635
|||||||||||||||||
Sbjct: 479 tatctctatatatgcat 495
>gb|BU989539.1|BU989539 HF22A08r HF Hordeum vulgare subsp. vulgare cDNA clone HF22A08
5-PRIME, mRNA sequence
Length = 545
Score = 34.2 bits (17), Expect = 6.4
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 619 tatctctatatatgcat 635
|||||||||||||||||
Sbjct: 486 tatctctatatatgcat 502
>gb|BU989558.1|BU989558 HF22B04r HF Hordeum vulgare subsp. vulgare cDNA clone HF22B04
5-PRIME, mRNA sequence
Length = 527
Score = 34.2 bits (17), Expect = 6.4
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 619 tatctctatatatgcat 635
|||||||||||||||||
Sbjct: 467 tatctctatatatgcat 483
>gb|BU989747.1|BU989747 HF22J11r HF Hordeum vulgare subsp. vulgare cDNA clone HF22J11
5-PRIME, mRNA sequence
Length = 527
Score = 34.2 bits (17), Expect = 6.4
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 619 tatctctatatatgcat 635
|||||||||||||||||
Sbjct: 467 tatctctatatatgcat 483
>gb|BU994505.1|BU994505 HM07E15r HM Hordeum vulgare subsp. vulgare cDNA clone HM07E15
5-PRIME, mRNA sequence
Length = 644
Score = 34.2 bits (17), Expect = 6.4
Identities = 20/21 (95%)
Strand = Plus / Plus
Query: 287 gtcctcttcatcctcgacgag 307
|||||||||||| ||||||||
Sbjct: 541 gtcctcttcatcgtcgacgag 561
>gb|CA008241.1|CA008241 HU10F13r HU Hordeum vulgare subsp. vulgare cDNA clone HU10F13
5-PRIME, mRNA sequence
Length = 457
Score = 34.2 bits (17), Expect = 6.4
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 369 tcctcttcggcttcggc 385
|||||||||||||||||
Sbjct: 114 tcctcttcggcttcggc 130
>gb|CA010976.1|CA010976 HT07J23u HT Hordeum vulgare subsp. vulgare cDNA clone HT07J23
3-PRIME, mRNA sequence
Length = 451
Score = 34.2 bits (17), Expect = 6.4
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 619 tatctctatatatgcat 635
|||||||||||||||||
Sbjct: 60 tatctctatatatgcat 44
>gb|CA013174.1|CA013174 HT07J23r HT Hordeum vulgare subsp. vulgare cDNA clone HT07J23
5-PRIME, mRNA sequence
Length = 518
Score = 34.2 bits (17), Expect = 6.4
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 619 tatctctatatatgcat 635
|||||||||||||||||
Sbjct: 459 tatctctatatatgcat 475
>gb|CB859632.1|CB859632 HI11B04w HI Hordeum vulgare subsp. vulgare cDNA clone HI11B04
3-PRIME, mRNA sequence
Length = 630
Score = 34.2 bits (17), Expect = 6.4
Identities = 20/21 (95%)
Strand = Plus / Minus
Query: 287 gtcctcttcatcctcgacgag 307
|||||||||||| ||||||||
Sbjct: 380 gtcctcttcatcgtcgacgag 360
>gb|CB880033.1|CB880033 HM05E15w HM Hordeum vulgare subsp. vulgare cDNA clone HM05E15
3-PRIME, mRNA sequence
Length = 270
Score = 34.2 bits (17), Expect = 6.4
Identities = 20/21 (95%)
Strand = Plus / Minus
Query: 287 gtcctcttcatcctcgacgag 307
|||||||||||| ||||||||
Sbjct: 259 gtcctcttcatcgtcgacgag 239
Database: Hordeum_nucl_with_EST.fasta
Posted date: May 2, 2006 2:38 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 107,709
Number of Sequences: 312970
Number of extensions: 107709
Number of successful extensions: 31183
Number of sequences better than 10.0: 150
Number of HSP's better than 10.0 without gapping: 150
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 31000
Number of HSP's gapped (non-prelim): 171
length of query: 761
length of database: 175,134,539
effective HSP length: 19
effective length of query: 742
effective length of database: 169,188,109
effective search space: 125537576878
effective search space used: 125537576878
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 17 (34.2 bits)