BLASTN 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 1716368.2.1
         (1356 letters)

Database: Hordeum_nucl_with_EST.fasta 
           312,970 sequences; 175,134,539 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|BI950777.1|BI950777  HVSMEl0023C15f Hordeum vulgare spike...   242   3e-062
gb|BJ463021.1|BJ463021  BJ463021 K. Sato unpublished cDNA li...   222   2e-056
gb|CA019924.1|CA019924  HV13L18r HV Hordeum vulgare subsp. v...   206   1e-051
gb|BF257093.3|BF257093  HVSMEf0011N11f Hordeum vulgare seedl...   202   2e-050
gb|BI958556.1|BI958556  HVSMEn0015J19f Hordeum vulgare rachi...   153   2e-035
gb|BF259315.3|BF259315  HVSMEf0019E07f Hordeum vulgare seedl...   101   6e-020
gb|AJ463236.1|AJ463236  AJ463236 S00002 Hordeum vulgare subs...    90   2e-016
gb|AJ463237.1|AJ463237  AJ463237 S00002 Hordeum vulgare subs...    80   2e-013
gb|BI959546.1|BI959546  HVSMEn0020C08f Hordeum vulgare rachi...    72   5e-011
gb|BG368652.1|BG368652  HVSMEi0020B24f Hordeum vulgare 20 DA...    66   3e-009
gb|BG368109.2|BG368109  HVSMEi0015L12f Hordeum vulgare 20 DA...    66   3e-009
gb|BG369116.2|BG369116  HVSMEi0021M10f Hordeum vulgare 20 DA...    66   3e-009
gb|BM098205.2|BM098205  EBpi03_SQ002_N14_R pistil, 4 DPA, no...    66   3e-009
gb|BU980984.1|BU980984  HA22E18r HA Hordeum vulgare subsp. v...    66   3e-009
gb|BG368126.2|BG368126  HVSMEi0015M21f Hordeum vulgare 20 DA...    58   8e-007
gb|BF257559.2|BF257559  HVSMEf0013D22f Hordeum vulgare seedl...    50   2e-004
gb|BM442260.2|BM442260  EBan01_SQ002_K24_R anther, yellow st...    46   0.003
gb|BE193294.3|BE193294  HVSMEh0080H17f Hordeum vulgare 5-45 ...    44   0.012
gb|BE193443.3|BE193443  HVSMEh0081A10f Hordeum vulgare 5-45 ...    44   0.012
gb|BE602242.3|BE602242  HVSMEh0098D05f Hordeum vulgare 5-45 ...    44   0.012
gb|BG367014.2|BG367014  HVSMEi0009N03f Hordeum vulgare 20 DA...    44   0.012
gb|BG367966.2|BG367966  HVSMEi0015B12f Hordeum vulgare 20 DA...    44   0.012
gb|BG368897.2|BG368897  HVSMEi0021D09f Hordeum vulgare 20 DA...    44   0.012
gb|BG369955.2|BG369955  HVSMEi0026K23f Hordeum vulgare 20 DA...    44   0.012
gb|BU982831.1|BU982831  HA27L21r HA Hordeum vulgare subsp. v...    44   0.012
gb|BU995887.1|BU995887  HM11L01r HM Hordeum vulgare subsp. v...    44   0.012
gb|BI948873.1|BI948873  HVSMEl0011C18f Hordeum vulgare spike...    42   0.047
gb|BE193589.2|BE193589  HVSMEh0081M20f Hordeum vulgare 5-45 ...    42   0.047
gb|AL509792.1|AL509792  AL509792 Hordeum vulgare Barke devel...    40   0.19 
gb|BG299356.2|BG299356  HVSMEa0019J09f Hordeum vulgare seedl...    40   0.19 
gb|BG416780.1|BG416780  HVSMEk0014H23f Hordeum vulgare testa...    40   0.19 
gb|BI958420.1|BI958420  HVSMEn0014O10f Hordeum vulgare rachi...    40   0.19 
gb|BE060246.3|BE060246  HVSMEg0011L08f Hordeum vulgare pre-a...    40   0.19 
gb|AV917087.1|AV917087  AV917087 K. Sato unpublished cDNA li...    40   0.19 
gb|BJ467335.1|BJ467335  BJ467335 K. Sato unpublished cDNA li...    40   0.19 
gb|BQ459628.1|BQ459628  HA08J01r HA Hordeum vulgare subsp. v...    40   0.19 
gb|BM372620.2|BM372620  EBpi05_SQ003_H14_R pistil, 8 DPA, no...    40   0.19 
gb|BQ767036.1|BQ767036  EBro08_SQ007_G24_R root, 3 week, dro...    40   0.19 
gb|BU978858.1|BU978858  HA14H15r HA Hordeum vulgare subsp. v...    40   0.19 
gb|BU980607.1|BU980607  HA21C12r HA Hordeum vulgare subsp. v...    40   0.19 
gb|CK122346.1|CK122346  BES1824102p12 BES1824 Hordeum vulgar...    40   0.19 
gb|CK124171.1|CK124171  BES1824107e17 BES1824 Hordeum vulgar...    40   0.19 
gb|CK124288.1|CK124288  BES1824108e08 BES1824 Hordeum vulgar...    40   0.19 
emb|AJ234766.1|HVU234766  Hordeum vulgare genomic DNA fragme...    40   0.19 
>gb|BI950777.1|BI950777 HVSMEl0023C15f Hordeum vulgare spike EST library HVcDNA0012
           (Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
           clone HVSMEl0023C15f, mRNA sequence
          Length = 986

 Score =  242 bits (122), Expect = 3e-062
 Identities = 376/458 (82%), Gaps = 2/458 (0%)
 Strand = Plus / Minus

                                                                       
Query: 459 tgccgttgttgaggcgccacgtggcgccccagttgtgcgccataggagtccagacgccgc 518
           ||||||||||||||||||||   ||||||||||  || | |||  | |||||| ||||||
Sbjct: 462 tgccgttgttgaggcgccacaacgcgccccagtcctgtgtcatttgcgtccaggcgccgc 403

                                                                       
Query: 519 tgccggcctccatgaggtccacggcgctgaggtcgccgtcgtcgtcctcgaactcgatga 578
           ||||||||||| ||||| |||||||  ||||||||||||||||||||||||||||||| |
Sbjct: 402 tgccggcctccttgagggccacggccttgaggtcgccgtcgtcgtcctcgaactcgatca 343

                                                                       
Query: 579 gcacgtcgaagtagtacgggttcgcgccctgatccaccttgaacgcgatgttgacgccgg 638
           |    | ||||||| | ||||| | |||||| ||||||||||| || ||||||||||| |
Sbjct: 342 gggtcttgaagtagaaggggttggagccctggtccaccttgaaggcaatgttgacgccag 283

                                                                       
Query: 639 tgtacttgcacggcaccctcctgtacaggatcctgagcacgccgccagcgcggagcttgt 698
            ||||||||| ||||| ||| ||||| | || ||||  |||||||| |||||||||||||
Sbjct: 282 ggtacttgcatggcactctcttgtactgcattctgatgacgccgccggcgcggagcttgt 223

                                                                       
Query: 699 cggccatgccgggccgggccatggcgcccatggcggtgccgctcatgtcaaagt-gctcg 757
           |||||||||| |||   ||||||||||||| ||||||||||||||||||||| | || ||
Sbjct: 222 cggccatgccaggcttcgccatggcgcccaaggcggtgccgctcatgtcaaaatggcacg 163

                                                                       
Query: 758 acctcgccggggaacagcccgccaggggactggtcggtgattacgatggtcacgggctgg 817
             |||||||||| ||||   ||| |||  |  ||||||||| || | |||||| ||||  
Sbjct: 162 -gctcgccggggtacaggttgccggggctcaagtcggtgatgaccacggtcacaggcttc 104

                                                                       
Query: 818 ccggagcacgcggcgttggtcgtgcatttcacctcgtagcaggcgccgcagccctcgcct 877
           |||||||| || | |||| ||| |||||| || || ||||| ||||||||||||| ||| 
Sbjct: 103 ccggagcaggccgagttgctcgagcatttaacatcatagcacgcgccgcagcccttgccc 44

                                                 
Query: 878 cccctgtacagtggcgtgctcccggcggcgatcatcga 915
             | || |||| || | |||||||||||||||||||||
Sbjct: 43  ttcatgaacagaggggagctcccggcggcgatcatcga 6

 Score = 50.1 bits (25), Expect = 2e-004
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                
Query: 384 ggatggcgttgttggcgacgagcaccctgcgggagtcggaggtgagccggagc 436
           ||||| ||||||||  |||||||  ||||| |||||||||||||||| |||||
Sbjct: 537 ggatgacgttgttgatgacgagcttcctgccggagtcggaggtgagctggagc 485
>gb|BJ463021.1|BJ463021 BJ463021 K. Sato unpublished cDNA library, cv. Haruna Nijo
           germination shoots Hordeum vulgare subsp. vulgare cDNA
           clone bags25g15 5', mRNA sequence
          Length = 532

 Score =  222 bits (112), Expect = 2e-056
 Identities = 247/292 (84%)
 Strand = Plus / Minus

                                                                       
Query: 459 tgccgttgttgaggcgccacgtggcgccccagttgtgcgccataggagtccagacgccgc 518
           ||||||||||||||||||||   ||||||||||  || | |||  | |||||| ||||||
Sbjct: 456 tgccgttgttgaggcgccacaacgcgccccagtcctgtgtcatttgcgtccaggcgccgc 397

                                                                       
Query: 519 tgccggcctccatgaggtccacggcgctgaggtcgccgtcgtcgtcctcgaactcgatga 578
           ||||||||||| ||||| |||||||  ||||||||||||||||||||||||||||||| |
Sbjct: 396 tgccggcctccttgagggccacggccttgaggtcgccgtcgtcgtcctcgaactcgatca 337

                                                                       
Query: 579 gcacgtcgaagtagtacgggttcgcgccctgatccaccttgaacgcgatgttgacgccgg 638
           |    | ||||||| | ||||| | |||||| |||||| |||| || ||||||||||| |
Sbjct: 336 gggtcttgaagtagaaggggttggagccctggtccaccctgaaggcaatgttgacgccag 277

                                                                       
Query: 639 tgtacttgcacggcaccctcctgtacaggatcctgagcacgccgccagcgcggagcttgt 698
            ||||||||| ||||| ||| ||||| | || ||||  |||||||| |||||||||||||
Sbjct: 276 ggtacttgcatggcactctcttgtactgcattctgatgacgccgccggcgcggagcttgt 217

                                                               
Query: 699 cggccatgccgggccgggccatggcgcccatggcggtgccgctcatgtcaaa 750
           |||||||||| |||   ||||||||||||| |||||||||||||||||||||
Sbjct: 216 cggccatgccaggcttcgccatggcgcccaaggcggtgccgctcatgtcaaa 165

 Score = 44.1 bits (22), Expect = 0.012
 Identities = 40/47 (85%)
 Strand = Plus / Minus

                                                          
Query: 390 cgttgttggcgacgagcaccctgcgggagtcggaggtgagccggagc 436
           ||||||||   ||||||  ||||| ||||||| ||||||||||||||
Sbjct: 525 cgttgttgannacgagcttcctgccggagtcgnaggtgagccggagc 479
>gb|CA019924.1|CA019924 HV13L18r HV Hordeum vulgare subsp. vulgare cDNA clone HV13L18
           5-PRIME, mRNA sequence
          Length = 549

 Score =  206 bits (104), Expect = 1e-051
 Identities = 396/491 (80%), Gaps = 3/491 (0%)
 Strand = Plus / Minus

                                                                       
Query: 482 gcgccccagttgtgcgccataggagtccagacgccgctgccggcctccatgaggtccacg 541
           ||||||||||| ||| |||| || ||||||  ||||| |  ||| ||||||||||| |||
Sbjct: 505 gcgccccagttctgcaccatgggcgtccaggtgccgcagttggcttccatgaggtcgacg 446

                                                                       
Query: 542 gcgctgaggtcgccgtcgtcgtcctcgaactcgatgagcacgtcgaagtagtacgggttc 601
           | | ||||||||||||||||||||||||||||||| ||||| || | |||| | ||||| 
Sbjct: 445 gtgttgaggtcgccgtcgtcgtcctcgaactcgatcagcacctccaggtagaaggggttg 386

                                                                       
Query: 602 gcgccctgatccaccttgaacgcgatgttgacgccggtgtacttgcacggcaccctcctg 661
           | |||||| ||||||||||| || ||||| | ||| | ||||||||| ||||||||| ||
Sbjct: 385 gagccctggtccaccttgaaggcaatgttcatgccagggtacttgcatggcaccctcttg 326

                                                                       
Query: 662 tacaggatcctgagcacgccgccagcgcggagcttgtcggccatgccgggccgggccatg 721
           ||| ||||| |||  |  ||||  || ||||| |||||||||||||| |||   ||||||
Sbjct: 325 tactggatcttgacgataccgctggcccggagtttgtcggccatgccaggcttcgccatg 266

                                                                       
Query: 722 gcgcccatggcggtgccgctcatgtcaaagtgctcgacctcgccggggaa--cag-cccg 778
           |||||||||| ||||||||||||||| |||||  || |||||||| || |  | | ||||
Sbjct: 265 gcgcccatggaggtgccgctcatgtcgaagtgggcggcctcgccgaggcaggcggccccg 206

                                                                       
Query: 779 ccaggggactggtcggtgattacgatggtcacgggctggccggagcacgcggcgttggtc 838
           || ||| ||| ||||||||| |||| |||| | |||||||||||||| ||   |||    
Sbjct: 205 ccggggcactcgtcggtgatgacgacggtcgccggctggccggagcatgcctggttaccg 146

                                                                       
Query: 839 gtgcatttcacctcgtagcaggcgccgcagccctcgcctcccctgtacagtggcgtgctc 898
           |||||||| ||||||||||| || |||||||||| ||| || ||||| || |  | | ||
Sbjct: 145 gtgcatttaacctcgtagcaagctccgcagcccttgccccctctgtagagcgatgggttc 86

                                                                       
Query: 899 ccggcggcgatcatcgagtcgaatggcttctttccgacggccgtctggtagccgcacgcg 958
           |||||||||||||||||   ||| |||   || ||||| ||  |||||||||| ||||||
Sbjct: 85  ccggcggcgatcatcgacgagaagggccggttcccgacagcgctctggtagccacacgcg 26

                      
Query: 959 ccgccgtcgct 969
           || ||||||||
Sbjct: 25  ccaccgtcgct 15
>gb|BF257093.3|BF257093 HVSMEf0011N11f Hordeum vulgare seedling root EST library HVcDNA0007
           (Etiolated and unstressed) Hordeum vulgare subsp.
           vulgare cDNA clone HVSMEf0011N11f, mRNA sequence
          Length = 816

 Score =  202 bits (102), Expect = 2e-050
 Identities = 355/437 (81%), Gaps = 3/437 (0%)
 Strand = Plus / Minus

                                                                       
Query: 482 gcgccccagttgtgcgccataggagtccagacgccgctgccggcctccatgaggtccacg 541
           ||||||||||| ||| |||| || ||||||  ||||| |  ||||||||||||||| |||
Sbjct: 489 gcgccccagttctgcaccatgggcgtccaggtgccgcagttggcctccatgaggtcgacg 430

                                                                       
Query: 542 gcgctgaggtcgccgtcgtcgtcctcgaactcgatgagcacgtcgaagtagtacgggttc 601
           | | | ||||||||||||||||||||||||||||| ||||| || | |||| | ||||| 
Sbjct: 429 gtgttaaggtcgccgtcgtcgtcctcgaactcgatcagcacctccaggtagaaggggttg 370

                                                                       
Query: 602 gcgccctgatccaccttgaacgcgatgttgacgccggtgtacttgcacggcaccctcctg 661
           | |||||| ||||||||||| || ||||| | ||| | ||||||||| ||||||||| ||
Sbjct: 369 gagccctggtccaccttgaaggcaatgttcatgccagggtacttgcatggcaccctcttg 310

                                                                       
Query: 662 tacaggatcctgagcacgccgccagcgcggagcttgtcggccatgccgggccgggccatg 721
           ||| ||||| |||  |  ||||  || ||||| |||||||||||||| |||   ||||||
Sbjct: 309 tactggatcttgacgataccgctggcccggagtttgtcggccatgccaggcttcgccatg 250

                                                                       
Query: 722 gcgcccatggcggtgccgctcatgtcaaagtgctcgacctcgccggggaa--cag-cccg 778
           |||||||||| ||||||||||||||| |||||  || |||||||| || |  | | ||||
Sbjct: 249 gcgcccatggaggtgccgctcatgtcgaagtgggcggcctcgccgaggcaggcggccccg 190

                                                                       
Query: 779 ccaggggactggtcggtgattacgatggtcacgggctggccggagcacgcggcgttggtc 838
           || ||| ||| ||||||||| |||| |||| | |||||||||||||| ||   |||    
Sbjct: 189 ccggggcactcgtcggtgatgacgacggtcgccggctggccggagcatgcctggttaccg 130

                                                                       
Query: 839 gtgcatttcacctcgtagcaggcgccgcagccctcgcctcccctgtacagtggcgtgctc 898
           |||||||| ||||||||||| || |||||||||| ||| || ||||| || |  | | ||
Sbjct: 129 gtgcatttaacctcgtagcaagctccgcagcccttgccccctctgtagagcgatgggttc 70

                            
Query: 899 ccggcggcgatcatcga 915
           |||||||||||||||||
Sbjct: 69  ccggcggcgatcatcga 53

 Score = 40.1 bits (20), Expect = 0.19
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 413 cgggagtcggaggtgagccggagc 436
           |||||||||||||||| |||||||
Sbjct: 564 cgggagtcggaggtgacccggagc 541
>gb|BI958556.1|BI958556 HVSMEn0015J19f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
            Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0015J19f,
            mRNA sequence
          Length = 649

 Score =  153 bits (77), Expect = 2e-035
 Identities = 327/408 (80%), Gaps = 3/408 (0%)
 Strand = Plus / Minus

                                                                        
Query: 611  tccaccttgaacgcgatgttgacgccggtgtacttgcacggcaccctcctgtacaggatc 670
            ||||||||||| || ||||| | ||| | ||||||||| ||||||||| ||||| |||||
Sbjct: 631  tccaccttgaaggcaatgttcatgccagggtacttgcatggcaccctcttgtactggatc 572

                                                                        
Query: 671  ctgagcacgccgccagcgcggagcttgtcggccatgccgggccgggccatggcgcccatg 730
             |||  |  ||||  || ||||| |||||||||||||| |||   |||||||||||||||
Sbjct: 571  ttgacgataccgctggcccggagtttgtcggccatgccaggcttcgccatggcgcccatg 512

                                                                        
Query: 731  gcggtgccgctcatgtcaaagtgctcgacctcgccggggaa--cag-cccgccaggggac 787
            | ||||||||||||||| |||||  || |||||||| || |  | | |||||| ||| ||
Sbjct: 511  gaggtgccgctcatgtcgaagtgggcggcctcgccgaggcaggcggccccgccggggcac 452

                                                                        
Query: 788  tggtcggtgattacgatggtcacgggctggccggagcacgcggcgttggtcgtgcatttc 847
            | ||||||||| |||| |||| | |||||||||||||| ||   |||    |||||||| 
Sbjct: 451  tcgtcggtgatgacgacggtcgccggctggccggagcatgcctggttaccggtgcattta 392

                                                                        
Query: 848  acctcgtagcaggcgccgcagccctcgcctcccctgtacagtggcgtgctcccggcggcg 907
            ||||||||||| || |||||||||| ||| || ||||| || |  | | |||||||||||
Sbjct: 391  acctcgtagcaagctccgcagcccttgccccctctgtagagcgatgggttcccggcggcg 332

                                                                        
Query: 908  atcatcgagtcgaatggcttctttccgacggccgtctggtagccgcacgcgccgccgtcg 967
            ||||||||   ||| |||   || ||||| ||  |||||||||| |||||||| ||||||
Sbjct: 331  atcatcgacgagaagggccggttcccgacagcgctctggtagccacacgcgccaccgtcg 272

                                                            
Query: 968  ctcccgtcgccgttggtcgcgccgtagtacgtggcgccggcgcctgac 1015
            || |||||||||| ||  |||||||| ||||| |||||| || |||||
Sbjct: 271  cttccgtcgccgtcgggggcgccgtaatacgtcgcgccgccggctgac 224

 Score = 44.1 bits (22), Expect = 0.012
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 1174 gagctttcgggtgcaagcaatggggctcac 1203
            |||||| |||| ||||||||||||||||||
Sbjct: 143  gagcttgcgggagcaagcaatggggctcac 114
>gb|BF259315.3|BF259315 HVSMEf0019E07f Hordeum vulgare seedling root EST library HVcDNA0007
            (Etiolated and unstressed) Hordeum vulgare subsp. vulgare
            cDNA clone HVSMEf0019E07f, mRNA sequence
          Length = 853

 Score =  101 bits (51), Expect = 6e-020
 Identities = 236/295 (80%), Gaps = 2/295 (0%)
 Strand = Plus / Minus

                                                                        
Query: 716  gccatggcgcccatggcggtgccgctcatgtcaaagtg-ctcgacctcgccggggaacag 774
            ||||||||||||| ||||||||||||||||||||| || | || | ||||||||| ||||
Sbjct: 562  gccatggcgcccaaggcggtgccgctcatgtcaaaatggcacggc-tcgccggggtacag 504

                                                                        
Query: 775  cccgccaggggactggtcggtgattacgatggtcacgggctggccggagcacgcggcgtt 834
               ||| |||  |  ||||||||| || | |||||| ||||  |||||||| || | |||
Sbjct: 503  gttgccggggctcaagtcggtgatgaccacggtcacaggcttcccggagcaggccgagtt 444

                                                                        
Query: 835  ggtcgtgcatttcacctcgtagcaggcgccgcagccctcgcctcccctgtacagtggcgt 894
            | ||| |||||| || || ||||| ||||||||||||| |||   | || |||| || | 
Sbjct: 443  gctcgagcatttaacatcatagcacgcgccgcagcccttgcccttcatgaacagagggga 384

                                                                        
Query: 895  gctcccggcggcgatcatcgagtcgaatggcttctttccgacggccgtctggtagccgca 954
            |||||||||||||||||||||   ||| |||   |  ||||| || ||||||||||| ||
Sbjct: 383  gctcccggcggcgatcatcgacgagaacggccggtgcccgacagcggtctggtagccaca 324

                                                                   
Query: 955  cgcgccgccgtcgctcccgtcgccgttggtcgcgccgtagtacgtggcgccggcg 1009
            ||| ||||| ||||  |||||||||||||    ||||||||||||||||||||||
Sbjct: 323  cgctccgccctcgccgccgtcgccgttggggttgccgtagtacgtggcgccggcg 269

 Score = 46.1 bits (23), Expect = 0.003
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                           
Query: 1174 gagctttcgggtgcaagcaatggggctcactaggagtgagaggacca 1220
            |||||| |||| |||||||||||||||||| || || ||||| ||||
Sbjct: 164  gagcttgcgggagcaagcaatggggctcacaagaagcgagagcacca 118
>gb|AJ463236.1|AJ463236 AJ463236 S00002 Hordeum vulgare subsp. vulgare cDNA clone
           S0000200037A04F1, mRNA sequence
          Length = 420

 Score = 89.7 bits (45), Expect = 2e-016
 Identities = 87/101 (86%)
 Strand = Plus / Minus

                                                                       
Query: 482 gcgccccagttgtgcgccataggagtccagacgccgctgccggcctccatgaggtccacg 541
           ||||||||||| ||| |||| || ||||||  ||||| |  ||| ||||||||||| |||
Sbjct: 110 gcgccccagttctgcaccatgggcgtccaggtgccgcagttggcttccatgaggtcgacg 51

                                                    
Query: 542 gcgctgaggtcgccgtcgtcgtcctcgaactcgatgagcac 582
           | | ||||||||||||||||||||||||||||||| |||||
Sbjct: 50  gtgttgaggtcgccgtcgtcgtcctcgaactcgatcagcac 10

 Score = 79.8 bits (40), Expect = 2e-013
 Identities = 88/104 (84%)
 Strand = Plus / Minus

                                                                       
Query: 333 aggggtagttgaccaaggagcggtaggtcttgccgggcttccacgcggccgggatggcgt 392
           |||||||||| |||||||||||||||||    |||| ||||||   | | |||||| |||
Sbjct: 265 aggggtagttaaccaaggagcggtaggtggctccggccttccagctgacggggatgacgt 206

                                                       
Query: 393 tgttggcgacgagcaccctgcgggagtcggaggtgagccggagc 436
           ||||| ||||||||  ||||| ||||||||||||||||||||||
Sbjct: 205 tgttgacgacgagcttcctgccggagtcggaggtgagccggagc 162
>gb|AJ463237.1|AJ463237 AJ463237 S00002 Hordeum vulgare subsp. vulgare cDNA clone
           S0000200087A08F1, mRNA sequence
          Length = 420

 Score = 79.8 bits (40), Expect = 2e-013
 Identities = 88/104 (84%)
 Strand = Plus / Minus

                                                                       
Query: 333 aggggtagttgaccaaggagcggtaggtcttgccgggcttccacgcggccgggatggcgt 392
           |||||||||| |||||||||||||||||    |||| ||||||   | | |||||| |||
Sbjct: 204 aggggtagttaaccaaggagcggtaggtggctccggccttccagctgacggggatgacgt 145

                                                       
Query: 393 tgttggcgacgagcaccctgcgggagtcggaggtgagccggagc 436
           ||||| ||||||||  ||||| ||||||||||||||||||||||
Sbjct: 144 tgttgacgacgagcttcctgccggagtcggaggtgagccggagc 101
>gb|BI959546.1|BI959546 HVSMEn0020C08f Hordeum vulgare rachis EST library HVcDNA0015
           (normal) Hordeum vulgare subsp. vulgare cDNA clone
           HVSMEn0020C08f, mRNA sequence
          Length = 737

 Score = 71.9 bits (36), Expect = 5e-011
 Identities = 87/104 (83%)
 Strand = Plus / Plus

                                                                       
Query: 331 tcaggggtagttgaccaaggagcggtaggtcttgccgggcttccacgcggccgggatggc 390
           |||||||||||| |||| ||||||||| ||    |||| ||||||   ||| |||||| |
Sbjct: 465 tcaggggtagttcaccagggagcggtacgtggctccggccttccaattggcggggatgac 524

                                                       
Query: 391 gttgttggcgacgagcaccctgcgggagtcggaggtgagccgga 434
           ||||||| ||||||||  ||||| ||||||||||||||||||||
Sbjct: 525 gttgttgacgacgagcttcctgccggagtcggaggtgagccgga 568
>gb|BG368652.1|BG368652 HVSMEi0020B24f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
           (20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
           HVSMEi0020B24f, mRNA sequence
          Length = 679

 Score = 65.9 bits (33), Expect = 3e-009
 Identities = 48/53 (90%)
 Strand = Plus / Minus

                                                                
Query: 548 aggtcgccgtcgtcgtcctcgaactcgatgagcacgtcgaagtagtacgggtt 600
           |||||||||||| |||||||| |||||||||||||| ||| |||||| |||||
Sbjct: 581 aggtcgccgtcgccgtcctcgtactcgatgagcacggcgaggtagtaggggtt 529

 Score = 44.1 bits (22), Expect = 0.012
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 839 gtgcatttcacctcgtagcaggcgccgcagccct 872
           ||||| ||||||| |||||||| |||||||||||
Sbjct: 290 gtgcacttcacctggtagcaggagccgcagccct 257
>gb|BG368109.2|BG368109 HVSMEi0015L12f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
           (20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
           HVSMEi0015L12f, mRNA sequence
          Length = 871

 Score = 65.9 bits (33), Expect = 3e-009
 Identities = 48/53 (90%)
 Strand = Plus / Minus

                                                                
Query: 548 aggtcgccgtcgtcgtcctcgaactcgatgagcacgtcgaagtagtacgggtt 600
           |||||||||||| |||||||| |||||||||||||| ||| |||||| |||||
Sbjct: 491 aggtcgccgtcgccgtcctcgtactcgatgagcacggcgaggtagtaggggtt 439

 Score = 44.1 bits (22), Expect = 0.012
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 839 gtgcatttcacctcgtagcaggcgccgcagccct 872
           ||||| ||||||| |||||||| |||||||||||
Sbjct: 200 gtgcacttcacctggtagcaggagccgcagccct 167
>gb|BG369116.2|BG369116 HVSMEi0021M10f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
           (20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
           HVSMEi0021M10f, mRNA sequence
          Length = 609

 Score = 65.9 bits (33), Expect = 3e-009
 Identities = 48/53 (90%)
 Strand = Plus / Minus

                                                                
Query: 548 aggtcgccgtcgtcgtcctcgaactcgatgagcacgtcgaagtagtacgggtt 600
           |||||||||||| |||||||| |||||||||||||| ||| |||||| |||||
Sbjct: 236 aggtcgccgtcgccgtcctcgtactcgatgagcacggcgaggtagtaggggtt 184
>gb|BM098205.2|BM098205 EBpi03_SQ002_N14_R pistil, 4 DPA, no treatment, cv Optic, EBpi03
           Hordeum vulgare subsp. vulgare cDNA clone
           EBpi03_SQ002_N14 5', mRNA sequence
          Length = 550

 Score = 65.9 bits (33), Expect = 3e-009
 Identities = 48/53 (90%)
 Strand = Plus / Minus

                                                                
Query: 548 aggtcgccgtcgtcgtcctcgaactcgatgagcacgtcgaagtagtacgggtt 600
           |||||||||||| |||||||| |||||||||||||| ||| |||||| |||||
Sbjct: 263 aggtcgccgtcgccgtcctcgtactcgatgagcacggcgaggtagtaggggtt 211
>gb|BU980984.1|BU980984 HA22E18r HA Hordeum vulgare subsp. vulgare cDNA clone HA22E18
           5-PRIME, mRNA sequence
          Length = 567

 Score = 65.9 bits (33), Expect = 3e-009
 Identities = 48/53 (90%)
 Strand = Plus / Minus

                                                                
Query: 548 aggtcgccgtcgtcgtcctcgaactcgatgagcacgtcgaagtagtacgggtt 600
           |||||||||||| |||||||| |||||||||||||| ||| |||||| |||||
Sbjct: 277 aggtcgccgtcgccgtcctcgtactcgatgagcacggcgaggtagtaggggtt 225

 Score = 42.1 bits (21), Expect = 0.047
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                    
Query: 337 gtagttgaccaaggagcggtaggtcttgccgggcttccacgcggccgggatggcgtt 393
           ||||||||| | ||||||||||||   ||||||||||||  |||| |||||| ||||
Sbjct: 494 gtagttgacgacggagcggtaggtgccgccgggcttccagccggcggggatgacgtt 438
>gb|BG368126.2|BG368126 HVSMEi0015M21f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
           (20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
           HVSMEi0015M21f, mRNA sequence
          Length = 817

 Score = 58.0 bits (29), Expect = 8e-007
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                
Query: 548 aggtcgccgtcgtcgtcctcgaactcgatgagcacgtcgaagtagtacgggtt 600
           |||||||||||| |||||||| |||| ||||||||| ||| |||||| |||||
Sbjct: 631 aggtcgccgtcgccgtcctcgtactcaatgagcacggcgaggtagtaggggtt 579

 Score = 44.1 bits (22), Expect = 0.012
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 839 gtgcatttcacctcgtagcaggcgccgcagccct 872
           ||||| ||||||| |||||||| |||||||||||
Sbjct: 340 gtgcacttcacctggtagcaggagccgcagccct 307
>gb|BF257559.2|BF257559 HVSMEf0013D22f Hordeum vulgare seedling root EST library HVcDNA0007
           (Etiolated and unstressed) Hordeum vulgare subsp.
           vulgare cDNA clone HVSMEf0013D22f, mRNA sequence
          Length = 844

 Score = 50.1 bits (25), Expect = 2e-004
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 715 ggccatggcgcccatggcggtgccgctcatgtc 747
           |||||||||||| | ||||||||||||||||||
Sbjct: 511 ggccatggcgccgaaggcggtgccgctcatgtc 479

 Score = 42.1 bits (21), Expect = 0.047
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 944 tggtagccgcacgcgccgccgtcgctcccgtcgccgt 980
           ||||| ||||||||||| |||||||| ||| ||||||
Sbjct: 285 tggtatccgcacgcgccaccgtcgctgccggcgccgt 249
>gb|BM442260.2|BM442260 EBan01_SQ002_K24_R anther, yellow stage, no treatment, cv Optic,
           EBan01 Hordeum vulgare subsp. vulgare cDNA clone
           EBan01_SQ002_K24 5', mRNA sequence
          Length = 147

 Score = 46.1 bits (23), Expect = 0.003
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                      
Query: 392 ttgttggcgacgagcaccctgcgggagtcggaggtgagccgga 434
           |||||||||||||||||| ||| |||  | |||||||||||||
Sbjct: 118 ttgttggcgacgagcaccttgccggaacccgaggtgagccgga 76
>gb|BE193294.3|BE193294 HVSMEh0080H17f Hordeum vulgare 5-45 DAP spike EST library
           HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
           cDNA clone HVSMEh0080H17f, mRNA sequence
          Length = 701

 Score = 44.1 bits (22), Expect = 0.012
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 839 gtgcatttcacctcgtagcaggcgccgcagccct 872
           ||||| ||||||| |||||||| |||||||||||
Sbjct: 340 gtgcacttcacctggtagcaggagccgcagccct 307
>gb|BE193443.3|BE193443 HVSMEh0081A10f Hordeum vulgare 5-45 DAP spike EST library
           HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
           cDNA clone HVSMEh0081A10f, mRNA sequence
          Length = 749

 Score = 44.1 bits (22), Expect = 0.012
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 839 gtgcatttcacctcgtagcaggcgccgcagccct 872
           ||||| ||||||| |||||||| |||||||||||
Sbjct: 337 gtgcacttcacctggtagcaggagccgcagccct 304
>gb|BE602242.3|BE602242 HVSMEh0098D05f Hordeum vulgare 5-45 DAP spike EST library
           HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
           cDNA clone HVSMEh0098D05f, mRNA sequence
          Length = 508

 Score = 44.1 bits (22), Expect = 0.012
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 699 cggccatgccgggccgggccatggcg 724
           ||||||||||||| ||||||||||||
Sbjct: 378 cggccatgccggggcgggccatggcg 353
>gb|BG367014.2|BG367014 HVSMEi0009N03f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
           (20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
           HVSMEi0009N03f, mRNA sequence
          Length = 803

 Score = 44.1 bits (22), Expect = 0.012
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 839 gtgcatttcacctcgtagcaggcgccgcagccct 872
           ||||| ||||||| |||||||| |||||||||||
Sbjct: 328 gtgcacttcacctggtagcaggagccgcagccct 295
>gb|BG367966.2|BG367966 HVSMEi0015B12f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
           (20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
           HVSMEi0015B12f, mRNA sequence
          Length = 869

 Score = 44.1 bits (22), Expect = 0.012
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 839 gtgcatttcacctcgtagcaggcgccgcagccct 872
           ||||| ||||||| |||||||| |||||||||||
Sbjct: 337 gtgcacttcacctggtagcaggagccgcagccct 304
>gb|BG368897.2|BG368897 HVSMEi0021D09f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
           (20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
           HVSMEi0021D09f, mRNA sequence
          Length = 864

 Score = 44.1 bits (22), Expect = 0.012
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 839 gtgcatttcacctcgtagcaggcgccgcagccct 872
           ||||| ||||||| |||||||| |||||||||||
Sbjct: 340 gtgcacttcacctggtagcaggagccgcagccct 307
>gb|BG369955.2|BG369955 HVSMEi0026K23f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
           (20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
           HVSMEi0026K23f, mRNA sequence
          Length = 492

 Score = 44.1 bits (22), Expect = 0.012
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 839 gtgcatttcacctcgtagcaggcgccgcagccct 872
           ||||| ||||||| |||||||| |||||||||||
Sbjct: 340 gtgcacttcacctggtagcaggagccgcagccct 307
>gb|BU982831.1|BU982831 HA27L21r HA Hordeum vulgare subsp. vulgare cDNA clone HA27L21
           5-PRIME, mRNA sequence
          Length = 491

 Score = 44.1 bits (22), Expect = 0.012
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 699 cggccatgccgggccgggccatggcg 724
           ||||||||||||| ||||||||||||
Sbjct: 228 cggccatgccggggcgggccatggcg 203
>gb|BU995887.1|BU995887 HM11L01r HM Hordeum vulgare subsp. vulgare cDNA clone HM11L01
           5-PRIME, mRNA sequence
          Length = 553

 Score = 44.1 bits (22), Expect = 0.012
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 699 cggccatgccgggccgggccatggcg 724
           ||||||||||||| ||||||||||||
Sbjct: 464 cggccatgccggggcgggccatggcg 439
>gb|BI948873.1|BI948873 HVSMEl0011C18f Hordeum vulgare spike EST library HVcDNA0012
           (Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
           clone HVSMEl0011C18f, mRNA sequence
          Length = 831

 Score = 42.1 bits (21), Expect = 0.047
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 700 ggccatgccgggccgggccatggcg 724
           |||||||||||| ||||||||||||
Sbjct: 151 ggccatgccgggtcgggccatggcg 127
>gb|BE193589.2|BE193589 HVSMEh0081M20f Hordeum vulgare 5-45 DAP spike EST library
           HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
           cDNA clone HVSMEh0081M20f, mRNA sequence
          Length = 520

 Score = 42.1 bits (21), Expect = 0.047
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                    
Query: 337 gtagttgaccaaggagcggtaggtcttgccgggcttccacgcggccgggatggcgtt 393
           ||||||||| | ||||||||||||   ||||||||||||  |||| |||||| ||||
Sbjct: 199 gtagttgacgacggagcggtaggtgccgccgggcttccagccggcggggatgacgtt 143
>gb|AL509792.1|AL509792 AL509792 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
           Hordeum vulgare subsp. vulgare cDNA clone HY02O05u 3',
           mRNA sequence
          Length = 490

 Score = 40.1 bits (20), Expect = 0.19
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 379 ggccgggatggcgttgttggcgacgagc 406
           |||||||||| | |||||||||||||||
Sbjct: 432 ggccgggatgaccttgttggcgacgagc 459
>gb|BG299356.2|BG299356 HVSMEa0019J09f Hordeum vulgare seedling shoot EST library
           HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
           cDNA clone HVSMEa0019J09f, mRNA sequence
          Length = 564

 Score = 40.1 bits (20), Expect = 0.19
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 379 ggccgggatggcgttgttggcgacgagc 406
           |||||||||| | |||||||||||||||
Sbjct: 111 ggccgggatgaccttgttggcgacgagc 84
>gb|BG416780.1|BG416780 HVSMEk0014H23f Hordeum vulgare testa/pericarp EST library
           HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
           clone HVSMEk0014H23f, mRNA sequence
          Length = 696

 Score = 40.1 bits (20), Expect = 0.19
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 379 ggccgggatggcgttgttggcgacgagc 406
           |||||||||| | |||||||||||||||
Sbjct: 225 ggccgggatgaccttgttggcgacgagc 198
>gb|BI958420.1|BI958420 HVSMEn0014O10f Hordeum vulgare rachis EST library HVcDNA0015
           (normal) Hordeum vulgare subsp. vulgare cDNA clone
           HVSMEn0014O10f, mRNA sequence
          Length = 689

 Score = 40.1 bits (20), Expect = 0.19
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 379 ggccgggatggcgttgttggcgacgagc 406
           |||||||||| | |||||||||||||||
Sbjct: 443 ggccgggatgaccttgttggcgacgagc 470
>gb|BE060246.3|BE060246 HVSMEg0011L08f Hordeum vulgare pre-anthesis spike EST library
           HVcDNA0008 (white to yellow anther) Hordeum vulgare
           subsp. vulgare cDNA clone HVSMEg0011L08f, mRNA sequence
          Length = 544

 Score = 40.1 bits (20), Expect = 0.19
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 379 ggccgggatggcgttgttggcgacgagc 406
           |||||||||| | |||||||||||||||
Sbjct: 415 ggccgggatgaccttgttggcgacgagc 388
>gb|AV917087.1|AV917087 AV917087 K. Sato unpublished cDNA library, cv. Haruna Nijo
           germination shoots Hordeum vulgare subsp. vulgare cDNA
           clone bags20l14 5', mRNA sequence
          Length = 542

 Score = 40.1 bits (20), Expect = 0.19
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 550 gtcgccgtcgtcgtcctcgaactcgatgagca 581
           |||||| ||| ||||||||||||||| |||||
Sbjct: 136 gtcgccctcgccgtcctcgaactcgacgagca 105
>gb|BJ467335.1|BJ467335 BJ467335 K. Sato unpublished cDNA library, cv. Haruna Nijo
           germination shoots Hordeum vulgare subsp. vulgare cDNA
           clone bags26l19 3', mRNA sequence
          Length = 527

 Score = 40.1 bits (20), Expect = 0.19
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 379 ggccgggatggcgttgttggcgacgagc 406
           |||||||||| | |||||||||||||||
Sbjct: 453 ggccgggatgaccttgttggcgacgagc 480
>gb|BQ459628.1|BQ459628 HA08J01r HA Hordeum vulgare subsp. vulgare cDNA clone HA08J01
           5-PRIME, mRNA sequence
          Length = 470

 Score = 40.1 bits (20), Expect = 0.19
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 379 ggccgggatggcgttgttggcgacgagc 406
           |||||||||| | |||||||||||||||
Sbjct: 375 ggccgggatgaccttgttggcgacgagc 348
>gb|BM372620.2|BM372620 EBpi05_SQ003_H14_R pistil, 8 DPA, no treatment, cv Optic, EBpi05
           Hordeum vulgare subsp. vulgare cDNA clone
           EBpi05_SQ003_H14 5', mRNA sequence
          Length = 341

 Score = 40.1 bits (20), Expect = 0.19
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 379 ggccgggatggcgttgttggcgacgagc 406
           |||||||||| | |||||||||||||||
Sbjct: 82  ggccgggatgaccttgttggcgacgagc 55
>gb|BQ767036.1|BQ767036 EBro08_SQ007_G24_R root, 3 week, drought-stressed, cv Optic, EBro08
           Hordeum vulgare subsp. vulgare cDNA clone
           EBro08_SQ007_G24 5', mRNA sequence
          Length = 535

 Score = 40.1 bits (20), Expect = 0.19
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 379 ggccgggatggcgttgttggcgacgagc 406
           |||||||||| | |||||||||||||||
Sbjct: 107 ggccgggatgaccttgttggcgacgagc 80
>gb|BU978858.1|BU978858 HA14H15r HA Hordeum vulgare subsp. vulgare cDNA clone HA14H15
           5-PRIME, mRNA sequence
          Length = 482

 Score = 40.1 bits (20), Expect = 0.19
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 379 ggccgggatggcgttgttggcgacgagc 406
           |||||||||| | |||||||||||||||
Sbjct: 425 ggccgggatgaccttgttggcgacgagc 452
>gb|BU980607.1|BU980607 HA21C12r HA Hordeum vulgare subsp. vulgare cDNA clone HA21C12
           5-PRIME, mRNA sequence
          Length = 561

 Score = 40.1 bits (20), Expect = 0.19
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 482 gcgccccagttgtgcgccat 501
           ||||||||||||||||||||
Sbjct: 211 gcgccccagttgtgcgccat 192
>gb|CK122346.1|CK122346 BES1824102p12 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
           MPMGp2010P122 5-PRIME, mRNA sequence
          Length = 717

 Score = 40.1 bits (20), Expect = 0.19
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 379 ggccgggatggcgttgttggcgacgagc 406
           |||||||||| | |||||||||||||||
Sbjct: 543 ggccgggatgaccttgttggcgacgagc 516
>gb|CK124171.1|CK124171 BES1824107e17 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
           MPMGp2010E177 5-PRIME, mRNA sequence
          Length = 751

 Score = 40.1 bits (20), Expect = 0.19
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 379 ggccgggatggcgttgttggcgacgagc 406
           |||||||||| | |||||||||||||||
Sbjct: 306 ggccgggatgaccttgttggcgacgagc 279
>gb|CK124288.1|CK124288 BES1824108e08 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
           MPMGp2010E088 5-PRIME, mRNA sequence
          Length = 542

 Score = 40.1 bits (20), Expect = 0.19
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 482 gcgccccagttgtgcgccat 501
           ||||||||||||||||||||
Sbjct: 279 gcgccccagttgtgcgccat 260
>emb|AJ234766.1|HVU234766 Hordeum vulgare genomic DNA fragment; clone MWG2088.uni
          Length = 363

 Score = 40.1 bits (20), Expect = 0.19
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 482 gcgccccagttgtgcgccat 501
           ||||||||||||||||||||
Sbjct: 134 gcgccccagttgtgcgccat 153
  Database: Hordeum_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:16 PM
  Number of letters in database: 175,134,539
  Number of sequences in database:  312,970
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 192,374
Number of Sequences: 312970
Number of extensions: 192374
Number of successful extensions: 56563
Number of sequences better than  0.5: 45
Number of HSP's better than  0.5 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 56420
Number of HSP's gapped (non-prelim): 128
length of query: 1356
length of database: 175,134,539
effective HSP length: 19
effective length of query: 1337
effective length of database: 169,188,109
effective search space: 226204501733
effective search space used: 226204501733
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)