BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131591.2.2
(1252 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BM816192.1|BM816192 HC110D06_T3.ab1 HC Hordeum vulgare s... 519 e-146
gb|AL504786.1|AL504786 AL504786 Hordeum vulgare Barke roots... 511 e-143
gb|BI959927.1|BI959927 HVSMEn0022G20f Hordeum vulgare rachi... 511 e-143
gb|AV925746.1|AV925746 AV925746 K. Sato unpublished cDNA li... 511 e-143
gb|AV926724.1|AV926724 AV926724 K. Sato unpublished cDNA li... 511 e-143
emb|Z49146.1|HVPAL3MR H.vulgare partial PAL mRNA for phenyl... 511 e-143
gb|AV926549.1|AV926549 AV926549 K. Sato unpublished cDNA li... 507 e-142
gb|BF624772.2|BF624772 HVSMEa0017L07f Hordeum vulgare seedl... 504 e-141
gb|AV925745.1|AV925745 AV925745 K. Sato unpublished cDNA li... 504 e-141
gb|AL505744.1|AL505744 AL505744 Hordeum vulgare Barke roots... 498 e-139
gb|BI778012.2|BI778012 EBro07_SQ001_N12_R root, 3 week, red... 496 e-138
gb|CK122468.1|CK122468 BES1824103j12 BES1824 Hordeum vulgar... 496 e-138
gb|AV926550.1|AV926550 AV926550 K. Sato unpublished cDNA li... 494 e-138
gb|BF260697.2|BF260697 HVSMEf0022L07f Hordeum vulgare seedl... 488 e-136
gb|BI959668.1|BI959668 HVSMEn0020K24f Hordeum vulgare rachi... 488 e-136
gb|BI960417.1|BI960417 HVSMEn0024I12f Hordeum vulgare rachi... 476 e-133
gb|AV923557.1|AV923557 AV923557 K. Sato unpublished cDNA li... 456 e-127
gb|CA021868.1|CA021868 HZ41G07r HZ Hordeum vulgare subsp. v... 444 e-123
gb|BI953765.1|BI953765 HVSMEm0014E15f Hordeum vulgare green... 400 e-110
gb|BI957636.1|BI957636 HVSMEn0010H09f Hordeum vulgare rachi... 398 e-109
gb|BI958535.1|BI958535 HVSMEn0015H19f Hordeum vulgare rachi... 396 e-109
gb|BI960176.1|BI960176 HVSMEn0023I19f Hordeum vulgare rachi... 383 e-104
gb|BU994828.1|BU994828 HM08F11r HM Hordeum vulgare subsp. v... 363 9e-099
gb|BG414724.1|BG414724 HVSMEk0003I17f Hordeum vulgare testa... 361 4e-098
gb|BI957150.1|BI957150 HVSMEn0007M14f Hordeum vulgare rachi... 349 1e-094
gb|BI959468.1|BI959468 HVSMEn0019M15f Hordeum vulgare rachi... 347 5e-094
gb|BQ471843.1|BQ471843 HV03K13r HV Hordeum vulgare subsp. v... 337 5e-091
gb|BI958009.1|BI958009 HVSMEn0012N24f Hordeum vulgare rachi... 321 3e-086
gb|BI957856.1|BI957856 HVSMEn0011M08f Hordeum vulgare rachi... 305 2e-081
gb|AL505894.1|AL505894 AL505894 Hordeum vulgare Barke roots... 299 1e-079
gb|AL503572.1|AL503572 AL503572 Hordeum vulgare Barke roots... 297 5e-079
gb|BI958448.1|BI958448 HVSMEn0015A23f Hordeum vulgare rachi... 297 5e-079
gb|BM372113.2|BM372113 EBro03_SQ004_B02_R root, 3 week, wat... 295 2e-078
gb|BI958633.1|BI958633 HVSMEn0016A07f Hordeum vulgare rachi... 293 7e-078
gb|BF254075.2|BF254075 HVSMEf0002P06f Hordeum vulgare seedl... 281 3e-074
gb|BI957072.1|BI957072 HVSMEn0007E12f Hordeum vulgare rachi... 281 3e-074
gb|AV926050.1|AV926050 AV926050 K. Sato unpublished cDNA li... 280 1e-073
gb|BI959804.1|BI959804 HVSMEn0021K01f Hordeum vulgare rachi... 276 2e-072
gb|BG369913.2|BG369913 HVSMEi0026I13f Hordeum vulgare 20 DA... 276 2e-072
gb|BU983875.1|BU983875 HA31E23r HA Hordeum vulgare subsp. v... 274 7e-072
gb|BU996801.1|BU996801 HM14M22r HM Hordeum vulgare subsp. v... 268 4e-070
gb|BI958878.1|BI958878 HVSMEn0016P19f Hordeum vulgare rachi... 266 2e-069
gb|BU980765.1|BU980765 HA21K02r HA Hordeum vulgare subsp. v... 266 2e-069
gb|AV926974.1|AV926974 AV926974 K. Sato unpublished cDNA li... 264 6e-069
gb|BI960030.1|BI960030 HVSMEn0022P01f Hordeum vulgare rachi... 260 1e-067
gb|BF259309.2|BF259309 HVSMEf0018P05f Hordeum vulgare seedl... 250 1e-064
gb|BM442994.2|BM442994 EBro02_SQ002_C04_R root, 3 week, hyd... 246 1e-063
gb|BE215152.2|BE215152 HV_CEb0006A03f Hordeum vulgare seedl... 238 4e-061
gb|BM372206.2|BM372206 EBro03_SQ004_F04_R root, 3 week, wat... 238 4e-061
gb|BI959619.1|BI959619 HVSMEn0020H03f Hordeum vulgare rachi... 226 1e-057
gb|BI779552.2|BI779552 EBro01_SQ004_G11_R root, 3 week, hyd... 226 1e-057
gb|AV913368.1|AV913368 AV913368 K. Sato unpublished cDNA li... 222 2e-056
gb|AV926975.1|AV926975 AV926975 K. Sato unpublished cDNA li... 216 1e-054
gb|BI957512.1|BI957512 HVSMEn0009P04f Hordeum vulgare rachi... 212 2e-053
gb|BG418734.1|BG418734 HVSMEk0024D11f Hordeum vulgare testa... 210 8e-053
emb|Z49145.1|HVPAL2MR H.vulgare partial PAL mRNA for phenyl... 210 8e-053
gb|BM816193.1|BM816193 HC109D04_T3.ab1 HC Hordeum vulgare s... 208 3e-052
gb|AL504668.1|AL504668 AL504668 Hordeum vulgare Barke roots... 202 2e-050
gb|BF261029.2|BF261029 HVSMEf0023J05f Hordeum vulgare seedl... 198 3e-049
gb|AV913713.1|AV913713 AV913713 K. Sato unpublished cDNA li... 190 8e-047
gb|BI950187.1|BI950187 HVSMEl0019G14f Hordeum vulgare spike... 186 1e-045
gb|BJ464216.1|BJ464216 BJ464216 K. Sato unpublished cDNA li... 186 1e-045
gb|CA027255.1|CA027255 HZ58F14r HZ Hordeum vulgare subsp. v... 184 5e-045
gb|BI959719.1|BI959719 HVSMEn0020P03f Hordeum vulgare rachi... 182 2e-044
gb|AV914003.1|AV914003 AV914003 K. Sato unpublished cDNA li... 178 3e-043
gb|AV923897.1|AV923897 AV923897 K. Sato unpublished cDNA li... 178 3e-043
gb|BJ451668.1|BJ451668 BJ451668 K. Sato unpublished cDNA li... 178 3e-043
emb|Z49147.1|HVPAL7RM H.vulgare partial PAL mRNA for phenyl... 178 3e-043
gb|AV913699.1|AV913699 AV913699 K. Sato unpublished cDNA li... 176 1e-042
gb|AL505417.1|AL505417 AL505417 Hordeum vulgare Barke roots... 174 5e-042
gb|BI957553.1|BI957553 HVSMEn0010B19f Hordeum vulgare rachi... 168 3e-040
gb|BI958293.1|BI958293 HVSMEn0014E11f Hordeum vulgare rachi... 168 3e-040
gb|BE214612.2|BE214612 HV_CEb0003P13f Hordeum vulgare seedl... 168 3e-040
gb|BU995762.1|BU995762 HM11E17r HM Hordeum vulgare subsp. v... 167 1e-039
emb|X97313.1|HVPALGENE H.vulgare pal gene 167 1e-039
gb|BI959412.1|BI959412 HVSMEn0019J04f Hordeum vulgare rachi... 165 4e-039
gb|AV923901.1|AV923901 AV923901 K. Sato unpublished cDNA li... 165 4e-039
gb|BI959811.1|BI959811 HVSMEn0021K21f Hordeum vulgare rachi... 163 2e-038
gb|BM443210.2|BM443210 EBro02_SQ003_B08_R root, 3 week, hyd... 163 2e-038
gb|BU988288.1|BU988288 HF17D09r HF Hordeum vulgare subsp. v... 161 7e-038
gb|AV923115.1|AV923115 AV923115 K. Sato unpublished cDNA li... 155 4e-036
gb|BM442943.2|BM442943 EBro02_SQ001_P13_R root, 3 week, hyd... 153 2e-035
gb|AL505349.1|AL505349 AL505349 Hordeum vulgare Barke roots... 151 7e-035
gb|BF064573.2|BF064573 HV_CEb0015O20f Hordeum vulgare seedl... 149 3e-034
gb|BU973291.1|BU973291 HB24G20r BC Hordeum vulgare subsp. v... 149 3e-034
gb|CA025413.1|CA025413 HZ52B13r HZ Hordeum vulgare subsp. v... 149 3e-034
gb|BG310440.1|BG310440 HVSMEc0018N16f Hordeum vulgare seedl... 147 1e-033
gb|AV913531.1|AV913531 AV913531 K. Sato unpublished cDNA li... 139 3e-031
gb|AV912724.1|AV912724 AV912724 K. Sato unpublished cDNA li... 137 1e-030
gb|BF254022.2|BF254022 HVSMEf0002M12f Hordeum vulgare seedl... 135 4e-030
gb|BF255291.2|BF255291 HVSMEf0006H12f Hordeum vulgare seedl... 133 2e-029
gb|BI958670.1|BI958670 HVSMEn0016C06f Hordeum vulgare rachi... 123 1e-026
gb|BQ761712.1|BQ761712 EBem10_SQ001_J18_R embryo, 2 Day ger... 96 3e-018
gb|AV914027.1|AV914027 AV914027 K. Sato unpublished cDNA li... 88 8e-016
gb|BQ766026.1|BQ766026 EBro03_SQ008_H20_R root, 3 week, wat... 88 8e-016
gb|BE214036.1|BE214036 HV_CEb0001P14f Hordeum vulgare seedl... 86 3e-015
gb|BU996045.1|BU996045 HM12D20r HM Hordeum vulgare subsp. v... 86 3e-015
gb|AJ428920.1|AJ428920 AJ428920 Hordeum vulgare subsp. vulg... 86 3e-015
gb|AJ427587.1|AJ427587 AJ427587 Hordeum vulgare subsp. vulg... 84 1e-014
gb|AV916196.1|AV916196 AV916196 K. Sato unpublished cDNA li... 82 5e-014
gb|AJ582220.1|AJ582220 AJ582220 Hordeum vulgare subsp. vulg... 78 8e-013
gb|BI960057.1|BI960057 HVSMEn0023A11f Hordeum vulgare rachi... 76 3e-012
gb|BQ766648.1|BQ766648 EBro08_SQ006_A20_R root, 3 week, dro... 72 5e-011
gb|BI952745.1|BI952745 HVSMEm0007J22f Hordeum vulgare green... 68 8e-010
gb|BI957976.1|BI957976 HVSMEn0012M03f Hordeum vulgare rachi... 68 8e-010
gb|BI952315.1|BI952315 HVSMEm0005N20f Hordeum vulgare green... 64 1e-008
gb|BI953532.1|BI953532 HVSMEm0013B20f Hordeum vulgare green... 64 1e-008
gb|AV912785.1|AV912785 AV912785 K. Sato unpublished cDNA li... 64 1e-008
gb|AV912984.1|AV912984 AV912984 K. Sato unpublished cDNA li... 64 1e-008
gb|AV913611.1|AV913611 AV913611 K. Sato unpublished cDNA li... 64 1e-008
gb|AV916273.1|AV916273 AV916273 K. Sato unpublished cDNA li... 64 1e-008
gb|AV917520.1|AV917520 AV917520 K. Sato unpublished cDNA li... 64 1e-008
gb|AV917739.1|AV917739 AV917739 K. Sato unpublished cDNA li... 64 1e-008
gb|AV918915.1|AV918915 AV918915 K. Sato unpublished cDNA li... 64 1e-008
gb|AV921699.1|AV921699 AV921699 K. Sato unpublished cDNA li... 64 1e-008
gb|AV923332.1|AV923332 AV923332 K. Sato unpublished cDNA li... 64 1e-008
gb|AV924116.1|AV924116 AV924116 K. Sato unpublished cDNA li... 64 1e-008
gb|AV924722.1|AV924722 AV924722 K. Sato unpublished cDNA li... 64 1e-008
gb|AV926263.1|AV926263 AV926263 K. Sato unpublished cDNA li... 64 1e-008
gb|AV928512.1|AV928512 AV928512 K. Sato unpublished cDNA li... 64 1e-008
gb|AV929211.1|AV929211 AV929211 K. Sato unpublished cDNA li... 64 1e-008
gb|AV929817.1|AV929817 AV929817 K. Sato unpublished cDNA li... 64 1e-008
gb|AV929964.1|AV929964 AV929964 K. Sato unpublished cDNA li... 64 1e-008
gb|AV931149.1|AV931149 AV931149 K. Sato unpublished cDNA li... 64 1e-008
gb|AV933543.1|AV933543 AV933543 K. Sato unpublished cDNA li... 64 1e-008
gb|AV934012.1|AV934012 AV934012 K. Sato unpublished cDNA li... 64 1e-008
gb|AV936262.1|AV936262 AV936262 K. Sato unpublished cDNA li... 64 1e-008
gb|AV936802.1|AV936802 AV936802 K. Sato unpublished cDNA li... 64 1e-008
gb|BJ547020.1|BJ547020 BJ547020 K. Sato unpublished cDNA li... 64 1e-008
gb|BJ547023.1|BJ547023 BJ547023 K. Sato unpublished cDNA li... 64 1e-008
gb|BJ547153.1|BJ547153 BJ547153 K. Sato unpublished cDNA li... 64 1e-008
gb|BJ547434.1|BJ547434 BJ547434 K. Sato unpublished cDNA li... 64 1e-008
gb|BJ547483.1|BJ547483 BJ547483 K. Sato unpublished cDNA li... 64 1e-008
gb|BJ547711.1|BJ547711 BJ547711 K. Sato unpublished cDNA li... 64 1e-008
gb|BJ548025.1|BJ548025 BJ548025 K. Sato unpublished cDNA li... 64 1e-008
gb|BJ548129.1|BJ548129 BJ548129 K. Sato unpublished cDNA li... 64 1e-008
gb|BJ548370.1|BJ548370 BJ548370 K. Sato unpublished cDNA li... 64 1e-008
gb|BJ548773.1|BJ548773 BJ548773 K. Sato unpublished cDNA li... 64 1e-008
gb|BJ548860.1|BJ548860 BJ548860 K. Sato unpublished cDNA li... 64 1e-008
gb|BJ549531.1|BJ549531 BJ549531 K. Sato unpublished cDNA li... 64 1e-008
gb|BJ549568.1|BJ549568 BJ549568 K. Sato unpublished cDNA li... 64 1e-008
gb|BJ550125.1|BJ550125 BJ550125 K. Sato unpublished cDNA li... 64 1e-008
gb|BJ550193.1|BJ550193 BJ550193 K. Sato unpublished cDNA li... 64 1e-008
gb|CD662362.1|CD662362 UCRHV18_01df09_b1 Drought-stressed D... 64 1e-008
gb|AL508012.1|AL508012 AL508012 Hordeum vulgare Barke devel... 62 5e-008
gb|AL504447.1|AL504447 AL504447 Hordeum vulgare Barke roots... 60 2e-007
gb|AL504725.1|AL504725 AL504725 Hordeum vulgare Barke roots... 60 2e-007
gb|AL505681.1|AL505681 AL505681 Hordeum vulgare Barke roots... 60 2e-007
gb|BM816985.1|BM816985 HB107F05_SK.ab1 HB Hordeum vulgare s... 60 2e-007
gb|BQ459015.1|BQ459015 HA02J02r HA Hordeum vulgare subsp. v... 60 2e-007
gb|BQ459405.1|BQ459405 HA01D08r HA Hordeum vulgare subsp. v... 60 2e-007
gb|BQ459749.1|BQ459749 HA08D07r HA Hordeum vulgare subsp. v... 60 2e-007
gb|BQ464488.1|BQ464488 HF02G19r HF Hordeum vulgare subsp. v... 60 2e-007
gb|BQ469360.1|BQ469360 HM04G01r HM Hordeum vulgare subsp. v... 60 2e-007
gb|BQ470774.1|BQ470774 HX03P22r HX Hordeum vulgare subsp. v... 60 2e-007
gb|BQ472036.1|BQ472036 HV04D16r HV Hordeum vulgare subsp. v... 60 2e-007
gb|BQ656679.1|BQ656679 HA02J02u HA Hordeum vulgare subsp. v... 60 2e-007
gb|BQ656970.1|BQ656970 HA01D08u HA Hordeum vulgare subsp. v... 60 2e-007
gb|BM441138.2|BM441138 EBed02_SQ002_I14_R endosperm, 8 DPA,... 60 2e-007
gb|BM097521.2|BM097521 EBem05_SQ001_O16_R embryo, 14 DPA, n... 60 2e-007
gb|BM375539.2|BM375539 EBem06_SQ003_K09_R embryo, 21 DPA, n... 60 2e-007
gb|BM368629.2|BM368629 EBem08_SQ004_C15_R embryo, 40 DPA, n... 60 2e-007
gb|BM099380.2|BM099380 EBes01_SQ003_B11_R embryo sac, 4-6 D... 60 2e-007
gb|BM373332.2|BM373332 EBma04_SQ004_A23_R maternal, 10 DPA,... 60 2e-007
gb|BI780123.2|BI780123 EBma08_SQ001_H13_R maternal, 28 DPA,... 60 2e-007
gb|BI776794.2|BI776794 EBpi07_SQ001_M09_R pistil, 12 DPA, n... 60 2e-007
gb|BM097037.2|BM097037 EBpi07_SQ002_D07_R pistil, 12 DPA, n... 60 2e-007
gb|BM372302.2|BM372302 EBro03_SQ004_J08_R root, 3 week, wat... 60 2e-007
gb|BM370106.2|BM370106 EBro08_SQ003_A08_R root, 3 week, dro... 60 2e-007
gb|BM370247.2|BM370247 EBro08_SQ003_J18_R root, 3 week, dro... 60 2e-007
gb|BQ753991.1|BQ753991 EBca01_SQ002_H18_R carpel, pre-anthe... 60 2e-007
gb|BQ757868.1|BQ757868 EBem10_SQ005_H17_R embryo, 2 Day ger... 60 2e-007
gb|BQ760816.1|BQ760816 EBro03_SQ003_I24_R root, 3 week, wat... 60 2e-007
gb|BQ760944.1|BQ760944 EBro03_SQ003_O18_R root, 3 week, wat... 60 2e-007
gb|BQ763529.1|BQ763529 EBro02_SQ008_J14_R root, 3 week, hyd... 60 2e-007
gb|BQ763544.1|BQ763544 EBro02_SQ008_O18_R root, 3 week, hyd... 60 2e-007
gb|BQ763829.1|BQ763829 EBro03_SQ005_D14_R root, 3 week, wat... 60 2e-007
gb|BQ766385.1|BQ766385 EBro08_SQ005_H21_R root, 3 week, dro... 60 2e-007
gb|BQ766564.1|BQ766564 EBro08_SQ006_O11_R root, 3 week, dro... 60 2e-007
gb|BQ766792.1|BQ766792 EBro08_SQ007_J06_R root, 3 week, dro... 60 2e-007
gb|BQ767027.1|BQ767027 EBro08_SQ007_F21_R root, 3 week, dro... 60 2e-007
gb|BQ768122.1|BQ768122 EBro08_SQ010_B24_R root, 3 week, dro... 60 2e-007
gb|BU967566.1|BU967566 HB04L03r BC Hordeum vulgare subsp. v... 60 2e-007
gb|BU968055.1|BU968055 HB06E09r BC Hordeum vulgare subsp. v... 60 2e-007
gb|BU970651.1|BU970651 HB15E15r BC Hordeum vulgare subsp. v... 60 2e-007
gb|BU974744.1|BU974744 HB28P07r BC Hordeum vulgare subsp. v... 60 2e-007
gb|BU975234.1|BU975234 HB30H24r BC Hordeum vulgare subsp. v... 60 2e-007
gb|BU976084.1|BU976084 HA03B18u HA Hordeum vulgare subsp. v... 60 2e-007
gb|BU978688.1|BU978688 HA13P24r HA Hordeum vulgare subsp. v... 60 2e-007
gb|BU979883.1|BU979883 HA17K22r HA Hordeum vulgare subsp. v... 60 2e-007
gb|BU980229.1|BU980229 HA20B01r HA Hordeum vulgare subsp. v... 60 2e-007
gb|BU980280.1|BU980280 HA20D09r HA Hordeum vulgare subsp. v... 60 2e-007
gb|BU981252.1|BU981252 HA23B04r HA Hordeum vulgare subsp. v... 60 2e-007
gb|BU983044.1|BU983044 HA28G06r HA Hordeum vulgare subsp. v... 60 2e-007
gb|BU995215.1|BU995215 HM09J05r HM Hordeum vulgare subsp. v... 60 2e-007
gb|BU996866.1|BU996866 HI06B06r HI Hordeum vulgare subsp. v... 60 2e-007
gb|CA006909.1|CA006909 HU06B02r HU Hordeum vulgare subsp. v... 60 2e-007
gb|CA010875.1|CA010875 HT07M05u HT Hordeum vulgare subsp. v... 60 2e-007
gb|CA013225.1|CA013225 HT07M05r HT Hordeum vulgare subsp. v... 60 2e-007
gb|CA016385.1|CA016385 HV09C11u HV Hordeum vulgare subsp. v... 60 2e-007
gb|CA018614.1|CA018614 HV09C11r HV Hordeum vulgare subsp. v... 60 2e-007
gb|CA019853.1|CA019853 HV13H03r HV Hordeum vulgare subsp. v... 60 2e-007
gb|CA020582.1|CA020582 HZ36L20r HZ Hordeum vulgare subsp. v... 60 2e-007
gb|CA021887.1|CA021887 HZ41H04r HZ Hordeum vulgare subsp. v... 60 2e-007
gb|CA023216.1|CA023216 HZ45J06r HZ Hordeum vulgare subsp. v... 60 2e-007
gb|CA024070.1|CA024070 HZ48E11r HZ Hordeum vulgare subsp. v... 60 2e-007
gb|CA024589.1|CA024589 HZ49L21r HZ Hordeum vulgare subsp. v... 60 2e-007
gb|CA024708.1|CA024708 HZ50B08r HZ Hordeum vulgare subsp. v... 60 2e-007
gb|CA025270.1|CA025270 HZ51K13r HZ Hordeum vulgare subsp. v... 60 2e-007
gb|CA025350.1|CA025350 HZ51O16r HZ Hordeum vulgare subsp. v... 60 2e-007
gb|CA025443.1|CA025443 HZ52C24r HZ Hordeum vulgare subsp. v... 60 2e-007
gb|CA025679.1|CA025679 HZ52M22r HZ Hordeum vulgare subsp. v... 60 2e-007
gb|CA027898.1|CA027898 HZ60G05r HZ Hordeum vulgare subsp. v... 60 2e-007
gb|CA028334.1|CA028334 HZ61K20r HZ Hordeum vulgare subsp. v... 60 2e-007
gb|CA032642.1|CA032642 HX13M04r HX Hordeum vulgare subsp. v... 60 2e-007
gb|CB879570.1|CB879570 HP02M09w HP Hordeum vulgare subsp. v... 60 2e-007
gb|CB879974.1|CB879974 HM05B18w HM Hordeum vulgare subsp. v... 60 2e-007
gb|CB881361.1|CB881361 HM09J05w HM Hordeum vulgare subsp. v... 60 2e-007
gb|CK122553.1|CK122553 BES1824103p04 BES1824 Hordeum vulgar... 60 2e-007
gb|BF253524.2|BF253524 HVSMEf0001C19f Hordeum vulgare seedl... 56 3e-006
gb|BF259448.2|BF259448 HVSMEf0019C06f Hordeum vulgare seedl... 56 3e-006
gb|BF259940.2|BF259940 HVSMEf0020K21f Hordeum vulgare seedl... 56 3e-006
gb|BE060642.2|BE060642 HVSMEg0012N17f Hordeum vulgare pre-a... 56 3e-006
gb|BG343569.1|BG343569 HVSMEg0006G17f Hordeum vulgare pre-a... 56 3e-006
gb|BE602847.2|BE602847 HVSMEh0100D01f Hordeum vulgare 5-45 ... 56 3e-006
gb|BG366934.1|BG366934 HVSMEi0009B20f Hordeum vulgare 20 DA... 56 3e-006
gb|BI948587.1|BI948587 HVSMEl0010C17f Hordeum vulgare spike... 56 3e-006
gb|BI948815.1|BI948815 HVSMEl0010O15f Hordeum vulgare spike... 56 3e-006
gb|BI950724.1|BI950724 HVSMEl0022O17f Hordeum vulgare spike... 56 3e-006
gb|BI954165.1|BI954165 HVSMEm0016H09f Hordeum vulgare green... 56 3e-006
gb|BE216005.1|BE216005 HV_CEb0009B09f Hordeum vulgare seedl... 56 3e-006
gb|BI960362.1|BI960362 HVSMEn0024F16f Hordeum vulgare rachi... 56 3e-006
gb|BF260935.3|BF260935 HVSMEf0023F07f Hordeum vulgare seedl... 56 3e-006
gb|BE060869.3|BE060869 HVSMEg0013K17f Hordeum vulgare pre-a... 56 3e-006
gb|BE194451.3|BE194451 HVSMEh0085J21f Hordeum vulgare 5-45 ... 56 3e-006
gb|AV909023.1|AV909023 AV909023 K. Sato unpublished cDNA li... 56 3e-006
gb|AV910904.1|AV910904 AV910904 K. Sato unpublished cDNA li... 56 3e-006
gb|AV916878.1|AV916878 AV916878 K. Sato unpublished cDNA li... 56 3e-006
gb|AV922175.1|AV922175 AV922175 K. Sato unpublished cDNA li... 56 3e-006
gb|BQ665523.1|BQ665523 HX03P22u HX Hordeum vulgare subsp. v... 56 3e-006
gb|BM097345.2|BM097345 EBro01_SQ004_N23_R root, 3 week, hyd... 56 3e-006
gb|BJ543944.1|BJ543944 BJ543944 K. Sato unpublished cDNA li... 56 3e-006
gb|BJ543977.1|BJ543977 BJ543977 K. Sato unpublished cDNA li... 56 3e-006
gb|BJ544413.1|BJ544413 BJ544413 K. Sato unpublished cDNA li... 56 3e-006
gb|BJ545455.1|BJ545455 BJ545455 K. Sato unpublished cDNA li... 56 3e-006
gb|BJ545492.1|BJ545492 BJ545492 K. Sato unpublished cDNA li... 56 3e-006
gb|BJ545867.1|BJ545867 BJ545867 K. Sato unpublished cDNA li... 56 3e-006
gb|CV060104.1|CV060104 BNEL54e1 Barley EST endosperm librar... 56 3e-006
gb|CV063546.1|CV063546 BNEL90e4 Barley EST endosperm librar... 56 3e-006
gb|AL508708.1|AL508708 AL508708 Hordeum vulgare Barke devel... 54 1e-005
gb|BM100085.2|BM100085 EBma01_SQ001_C10_R maternal, 4 DPA, ... 54 1e-005
gb|BQ762501.1|BQ762501 EBro02_SQ004_F04 _R root, 3 week, hy... 54 1e-005
gb|BQ767318.1|BQ767318 EBro08_SQ008_F18_R root, 3 week, dro... 54 1e-005
gb|BU980360.1|BU980360 HA20H17r HA Hordeum vulgare subsp. v... 54 1e-005
gb|CA022397.1|CA022397 HZ43A07r HZ Hordeum vulgare subsp. v... 54 1e-005
gb|CA025581.1|CA025581 HZ52J02r HZ Hordeum vulgare subsp. v... 54 1e-005
gb|CV055900.1|CV055900 BNEL124f8 Barley EST endosperm libra... 54 1e-005
gb|BE421677.1|BE421677 HWM012cG.04r ITEC HWM Barley Leaf Li... 52 5e-005
gb|AL505030.1|AL505030 AL505030 Hordeum vulgare Barke roots... 52 5e-005
gb|AL506084.1|AL506084 AL506084 Hordeum vulgare Barke devel... 52 5e-005
gb|AL507268.1|AL507268 AL507268 Hordeum vulgare Barke devel... 52 5e-005
gb|BF260129.2|BF260129 HVSMEf0021C24f Hordeum vulgare seedl... 52 5e-005
gb|BF260879.2|BF260879 HVSMEf0023C23f Hordeum vulgare seedl... 52 5e-005
gb|BE214436.1|BE214436 HV_CEb0003H05f Hordeum vulgare seedl... 52 5e-005
gb|BE215230.1|BE215230 HV_CEb0006D16f Hordeum vulgare seedl... 52 5e-005
gb|BG300825.2|BG300825 HVSMEb0018I20f Hordeum vulgare seedl... 52 5e-005
gb|AV910051.1|AV910051 AV910051 K. Sato unpublished cDNA li... 52 5e-005
gb|AV912146.1|AV912146 AV912146 K. Sato unpublished cDNA li... 52 5e-005
gb|AV929689.1|AV929689 AV929689 K. Sato unpublished cDNA li... 52 5e-005
gb|BM816901.1|BM816901 HB106A12_SK.ab1 HB Hordeum vulgare s... 52 5e-005
gb|AJ436522.1|AJ436522 AJ436522 S00002 Hordeum vulgare subs... 52 5e-005
gb|BQ461063.1|BQ461063 HE01F05r HE Hordeum vulgare subsp. v... 52 5e-005
gb|BQ659423.1|BQ659423 HE01F05u HE Hordeum vulgare subsp. v... 52 5e-005
gb|BM440847.2|BM440847 EBca01_SQ001_G05_R carpel, pre-anthe... 52 5e-005
gb|BM368620.2|BM368620 EBem08_SQ004_C05_R embryo, 40 DPA, n... 52 5e-005
gb|BM372883.2|BM372883 EBma04_SQ002_E07_R maternal, 10 DPA,... 52 5e-005
gb|BM372789.2|BM372789 EBpi05_SQ003_O23_R pistil, 8 DPA, no... 52 5e-005
gb|BM369952.2|BM369952 EBro08_SQ002_H07_R root, 3 week, dro... 52 5e-005
gb|BQ759690.1|BQ759690 EBpi05_SQ004_F06_R pistil, 8 DPA, no... 52 5e-005
gb|BU967410.1|BU967410 HB04D14r BC Hordeum vulgare subsp. v... 52 5e-005
gb|BU969497.1|BU969497 HB11L03r BC Hordeum vulgare subsp. v... 52 5e-005
gb|BU974380.1|BU974380 HB27M02r BC Hordeum vulgare subsp. v... 52 5e-005
gb|BU987079.1|BU987079 HF13L22r HF Hordeum vulgare subsp. v... 52 5e-005
gb|BU994533.1|BU994533 HM07F24r HM Hordeum vulgare subsp. v... 52 5e-005
gb|BU996821.1|BU996821 HM14O01r HM Hordeum vulgare subsp. v... 52 5e-005
gb|BU997955.1|BU997955 HI09I11r HI Hordeum vulgare subsp. v... 52 5e-005
gb|CA021110.1|CA021110 HZ39C06r HZ Hordeum vulgare subsp. v... 52 5e-005
gb|CA027282.1|CA027282 HZ58G21r HZ Hordeum vulgare subsp. v... 52 5e-005
gb|CA027578.1|CA027578 HZ59F22r HZ Hordeum vulgare subsp. v... 52 5e-005
gb|CA029130.1|CA029130 HZ64E18r HZ Hordeum vulgare subsp. v... 52 5e-005
gb|CB859154.1|CB859154 HI09I11w HI Hordeum vulgare subsp. v... 52 5e-005
gb|CB880062.1|CB880062 HM05F24w HM Hordeum vulgare subsp. v... 52 5e-005
gb|CV053517.1|CV053517 BNEL100b7 Barley EST endosperm libra... 52 5e-005
gb|CV062048.1|CV062048 BNEL75g3 Barley EST endosperm librar... 52 5e-005
gb|CV063896.1|CV063896 BNEL94d12 Barley EST endosperm libra... 52 5e-005
gb|BI949967.1|BI949967 HVSMEl0017F16f Hordeum vulgare spike... 50 2e-004
gb|AV920509.1|AV920509 AV920509 K. Sato unpublished cDNA li... 50 2e-004
gb|BU986753.1|BU986753 HF12M22r HF Hordeum vulgare subsp. v... 50 2e-004
gb|CA027711.1|CA027711 HZ59M11r HZ Hordeum vulgare subsp. v... 50 2e-004
gb|CV054537.1|CV054537 BNEL110e9 Barley EST endosperm libra... 50 2e-004
gb|AL509469.1|AL509469 AL509469 Hordeum vulgare Barke devel... 48 7e-004
gb|BF622061.2|BF622061 HVSMEa0001K13f Hordeum vulgare seedl... 48 7e-004
gb|BF262278.2|BF262278 HV_CEa0003F07f Hordeum vulgare seedl... 48 7e-004
gb|BM100046.2|BM100046 EBma01_SQ001_A24_R maternal, 4 DPA, ... 48 7e-004
gb|BI956676.1|BI956676 HVSMEn0004L07f Hordeum vulgare rachi... 46 0.003
gb|BE214064.2|BE214064 HV_CEb0002B15f Hordeum vulgare seedl... 46 0.003
gb|BQ768801.1|BQ768801 EBro08_SQ012_P15_R root, 3 week, dro... 46 0.003
gb|BI958935.1|BI958935 HVSMEn0017E19f Hordeum vulgare rachi... 44 0.011
gb|AV916599.1|AV916599 AV916599 K. Sato unpublished cDNA li... 44 0.011
gb|AV918126.1|AV918126 AV918126 K. Sato unpublished cDNA li... 44 0.011
gb|AV926146.1|AV926146 AV926146 K. Sato unpublished cDNA li... 44 0.011
gb|CA026591.1|CA026591 HZ56F17r HZ Hordeum vulgare subsp. v... 44 0.011
gb|BI946657.1|BI946657 HVSMEl0001I06f Hordeum vulgare spike... 42 0.044
gb|BQ753817.1|BQ753817 EBca01_SQ001_M10_R carpel, pre-anthe... 42 0.044
gb|BF622933.1|BF622933 HVSMEa0012C15f Hordeum vulgare seedl... 40 0.17
gb|AV924594.1|AV924594 AV924594 K. Sato unpublished cDNA li... 40 0.17
gb|AV924604.1|AV924604 AV924604 K. Sato unpublished cDNA li... 40 0.17
gb|BM368745.2|BM368745 EBem08_SQ004_H21_R embryo, 40 DPA, n... 40 0.17
gb|BM376300.2|BM376300 EBma01_SQ002_P08_R maternal, 4 DPA, ... 40 0.17
gb|BQ758371.1|BQ758371 EBma04_SQ004_P01_R maternal, 10 DPA,... 40 0.17
gb|CB883407.1|CB883407 HQ02C17w HQ Hordeum vulgare subsp. v... 40 0.17
gb|CV059731.1|CV059731 BNEL50d10 Barley EST endosperm libra... 40 0.17
gb|CV063058.1|CV063058 BNEL86b7 Barley EST endosperm librar... 40 0.17
gb|CK124769.1|CK124769 BES1824110f11 BES1824 Hordeum vulgar... 40 0.17
>gb|BM816192.1|BM816192 HC110D06_T3.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC110D06_T3.ab1 similar to DNA-(apurinic or apyrimidinic
site) lyase,Histidine ammonia-lyase,Phenylalanine
ammonia-lyase,, mRNA sequence
Length = 904
Score = 519 bits (262), Expect = e-146
Identities = 367/402 (91%)
Strand = Plus / Minus
Query: 1 gacatgagcttcaggatgtcgatcgcctcggcggtcttcctggccgagacgaggcccagg 60
|||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||
Sbjct: 484 gacatgagcttcaggatgtccacagcctcggcggtcttcctggccgagacgaggccgaga 425
Query: 61 gagttcacgtcctggttgtgctgctccgcgctctgcacgtggttggtgatggggttgccc 120
||||||||||||||||||||||||||||| ||||| || |||||||| | |||||| |
Sbjct: 424 gagttcacgtcctggttgtgctgctccgcactctggacatggttggtcaccgggttggca 365
Query: 121 aggtactggagctcggagcagtaggacgccatggcgatctcggtgcccttgaacccgtag 180
|||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 364 aggtactggagctcagagcagtaggaagccatggcgatctcggtgcccttgaagccgtag 305
Query: 181 tccaggctcgggttgcggctgccggccaggttggaggtcagcccgttgttgtagaactcg 240
|||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 304 tccaggctggggttgcggctgcctgccaggttggaggtcagcccgttgttgtagaactcg 245
Query: 241 ttgaccagctcggagaactgcgcgaacatgagcttgccgatgttggcgacggcgaggcgg 300
||||| ||||| |||||||||||||||||||||||||| |||||||||| |||||| |||
Sbjct: 244 ttgacgagctccgagaactgcgcgaacatgagcttgccaatgttggcgatggcgagacgg 185
Query: 301 gcgttgtccatggacacgccgatcggggtgccctggaagttgccgccgtgcagcgccttg 360
| ||||||||||||||| ||||| || |||||||||||||||||||| || || ||||||
Sbjct: 184 gtgttgtccatggacacaccgatgggtgtgccctggaagttgccgccatggagtgccttg 125
Query: 361 ccgcggaggacgtcgatgaccgggttgtcgttcacggagttg 402
|| ||| ||||||| ||||| ||||||||||| |||||||||
Sbjct: 124 ccacggtggacgtcaatgactgggttgtcgttgacggagttg 83
>gb|AL504786.1|AL504786 AL504786 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW06G07V 5', mRNA sequence
Length = 700
Score = 511 bits (258), Expect = e-143
Identities = 366/402 (91%)
Strand = Plus / Minus
Query: 1 gacatgagcttcaggatgtcgatcgcctcggcggtcttcctggccgagacgaggcccagg 60
|||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||
Sbjct: 445 gacatgagcttcaggatgtccacagcctcggcggtcttcctggccgagacgaggccgaga 386
Query: 61 gagttcacgtcctggttgtgctgctccgcgctctgcacgtggttggtgatggggttgccc 120
||||||||||||||||||||||||||||| ||||| || |||||||| | |||||| |
Sbjct: 385 gagttcacgtcctggttgtgctgctccgcactctggacatggttggtcaccgggttggca 326
Query: 121 aggtactggagctcggagcagtaggacgccatggcgatctcggtgcccttgaacccgtag 180
|||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 325 aggtactggagctcagagcagtaggaagccatggcgatctcggtgcccttgaagccgtag 266
Query: 181 tccaggctcgggttgcggctgccggccaggttggaggtcagcccgttgttgtagaactcg 240
|||| ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 265 tccaagctggggttgcggctgcctgccaggttggaggtcagcccgttgttgtagaactcg 206
Query: 241 ttgaccagctcggagaactgcgcgaacatgagcttgccgatgttggcgacggcgaggcgg 300
||||| ||||| |||||||||||||||||||||||||| |||||||||| |||||| |||
Sbjct: 205 ttgacgagctccgagaactgcgcgaacatgagcttgccaatgttggcgatggcgagacgg 146
Query: 301 gcgttgtccatggacacgccgatcggggtgccctggaagttgccgccgtgcagcgccttg 360
| ||||||||||||||| ||||| || |||||||||||||||||||| || || ||||||
Sbjct: 145 gtgttgtccatggacacaccgatgggtgtgccctggaagttgccgccatggagtgccttg 86
Query: 361 ccgcggaggacgtcgatgaccgggttgtcgttcacggagttg 402
|| ||| ||||||| ||||| ||||||||||| |||||||||
Sbjct: 85 ccacggtggacgtcaatgactgggttgtcgttgacggagttg 44
>gb|BI959927.1|BI959927 HVSMEn0022G20f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0022G20f, mRNA sequence
Length = 645
Score = 511 bits (258), Expect = e-143
Identities = 366/402 (91%)
Strand = Plus / Minus
Query: 1 gacatgagcttcaggatgtcgatcgcctcggcggtcttcctggccgagacgaggcccagg 60
|||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||
Sbjct: 527 gacatgagcttcaggatgtccacagcctcggcggtcttcctggccgagacgaggccgaga 468
Query: 61 gagttcacgtcctggttgtgctgctccgcgctctgcacgtggttggtgatggggttgccc 120
||||||||||||||||||||||||||||| ||||| || |||||||| | |||||| |
Sbjct: 467 gagttcacgtcctggttgtgctgctccgcactctggacatggttggtcaccgggttggca 408
Query: 121 aggtactggagctcggagcagtaggacgccatggcgatctcggtgcccttgaacccgtag 180
|||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 407 aggtactggagctcagagcagtaggaagccatggcgatctcggtgcccttgaagccgtag 348
Query: 181 tccaggctcgggttgcggctgccggccaggttggaggtcagcccgttgttgtagaactcg 240
|||| ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 347 tccaagctggggttgcggctgcctgccaggttggaggtcagcccgttgttgtagaactcg 288
Query: 241 ttgaccagctcggagaactgcgcgaacatgagcttgccgatgttggcgacggcgaggcgg 300
||||| ||||| |||||||||||||||||||||||||| |||||||||| |||||| |||
Sbjct: 287 ttgacgagctccgagaactgcgcgaacatgagcttgccaatgttggcgatggcgagacgg 228
Query: 301 gcgttgtccatggacacgccgatcggggtgccctggaagttgccgccgtgcagcgccttg 360
| ||||||||||||||| ||||| || |||||||||||||||||||| || || ||||||
Sbjct: 227 gtgttgtccatggacacaccgatgggtgtgccctggaagttgccgccatggagtgccttg 168
Query: 361 ccgcggaggacgtcgatgaccgggttgtcgttcacggagttg 402
|| ||| ||||||| ||||| ||||||||||| |||||||||
Sbjct: 167 ccacggtggacgtcaatgactgggttgtcgttgacggagttg 126
>gb|AV925746.1|AV925746 AV925746 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd25k06 5', mRNA sequence
Length = 435
Score = 511 bits (258), Expect = e-143
Identities = 366/402 (91%)
Strand = Plus / Minus
Query: 1 gacatgagcttcaggatgtcgatcgcctcggcggtcttcctggccgagacgaggcccagg 60
|||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||
Sbjct: 405 gacatgagcttcaggatgtccacagcctcggcggtcttcctggccgagacgaggccgaga 346
Query: 61 gagttcacgtcctggttgtgctgctccgcgctctgcacgtggttggtgatggggttgccc 120
||||||||||||||||||||||||||||| ||||| || |||||||| | |||||| |
Sbjct: 345 gagttcacgtcctggttgtgctgctccgcactctggacatggttggtcaccgggttggca 286
Query: 121 aggtactggagctcggagcagtaggacgccatggcgatctcggtgcccttgaacccgtag 180
|||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 285 aggtactggagctcagagcagtaggaagccatggcgatctcggtgcccttgaagccgtag 226
Query: 181 tccaggctcgggttgcggctgccggccaggttggaggtcagcccgttgttgtagaactcg 240
|||| ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 225 tccaagctggggttgcggctgcctgccaggttggaggtcagcccgttgttgtagaactcg 166
Query: 241 ttgaccagctcggagaactgcgcgaacatgagcttgccgatgttggcgacggcgaggcgg 300
||||| ||||| |||||||||||||||||||||||||| |||||||||| |||||| |||
Sbjct: 165 ttgacgagctccgagaactgcgcgaacatgagcttgccaatgttggcgatggcgagacgg 106
Query: 301 gcgttgtccatggacacgccgatcggggtgccctggaagttgccgccgtgcagcgccttg 360
| ||||||||||||||| ||||| || |||||||||||||||||||| || || ||||||
Sbjct: 105 gtgttgtccatggacacaccgatgggtgtgccctggaagttgccgccatggagtgccttg 46
Query: 361 ccgcggaggacgtcgatgaccgggttgtcgttcacggagttg 402
|| ||| ||||||| ||||| ||||||||||| |||||||||
Sbjct: 45 ccacggtggacgtcaatgactgggttgtcgttgacggagttg 4
>gb|AV926724.1|AV926724 AV926724 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd23i14 5', mRNA sequence
Length = 569
Score = 511 bits (258), Expect = e-143
Identities = 366/402 (91%)
Strand = Plus / Minus
Query: 1 gacatgagcttcaggatgtcgatcgcctcggcggtcttcctggccgagacgaggcccagg 60
|||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||
Sbjct: 477 gacatgagcttcaggatgtccacagcctcggcggtcttcctggccgagacgaggccgaga 418
Query: 61 gagttcacgtcctggttgtgctgctccgcgctctgcacgtggttggtgatggggttgccc 120
||||||||||||||||||||||||||||| ||||| || |||||||| | |||||| |
Sbjct: 417 gagttcacgtcctggttgtgctgctccgcactctggacatggttggtcaccgggttggca 358
Query: 121 aggtactggagctcggagcagtaggacgccatggcgatctcggtgcccttgaacccgtag 180
|||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 357 aggtactggagctcagagcagtaggaagccatggcgatctcggtgcccttgaagccgtag 298
Query: 181 tccaggctcgggttgcggctgccggccaggttggaggtcagcccgttgttgtagaactcg 240
|||| ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 297 tccaagctggggttgcggctgcctgccaggttggaggtcagcccgttgttgtagaactcg 238
Query: 241 ttgaccagctcggagaactgcgcgaacatgagcttgccgatgttggcgacggcgaggcgg 300
||||| ||||| |||||||||||||||||||||||||| |||||||||| |||||| |||
Sbjct: 237 ttgacgagctccgagaactgcgcgaacatgagcttgccaatgttggcgatggcgagacgg 178
Query: 301 gcgttgtccatggacacgccgatcggggtgccctggaagttgccgccgtgcagcgccttg 360
| ||||||||||||||| ||||| || |||||||||||||||||||| || || ||||||
Sbjct: 177 gtgttgtccatggacacaccgatgggtgtgccctggaagttgccgccatggagtgccttg 118
Query: 361 ccgcggaggacgtcgatgaccgggttgtcgttcacggagttg 402
|| ||| ||||||| ||||| ||||||||||| |||||||||
Sbjct: 117 ccacggtggacgtcaatgactgggttgtcgttgacggagttg 76
>emb|Z49146.1|HVPAL3MR H.vulgare partial PAL mRNA for phenylalanine ammonia-lyase (1831
bp)
Length = 1831
Score = 511 bits (258), Expect = e-143
Identities = 366/402 (91%)
Strand = Plus / Minus
Query: 1 gacatgagcttcaggatgtcgatcgcctcggcggtcttcctggccgagacgaggcccagg 60
|||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||
Sbjct: 877 gacatgagcttcaggatgtccacagcctcggcggtcttcctggccgagacgaggccgaga 818
Query: 61 gagttcacgtcctggttgtgctgctccgcgctctgcacgtggttggtgatggggttgccc 120
||||||||||||||||||||||||||||| ||||| || |||||||| | |||||| |
Sbjct: 817 gagttcacgtcctggttgtgctgctccgcactctggacatggttggtcaccgggttggca 758
Query: 121 aggtactggagctcggagcagtaggacgccatggcgatctcggtgcccttgaacccgtag 180
|||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 757 aggtactggagctcagagcagtaggaagccatggcgatctcggtgcccttgaagccgtag 698
Query: 181 tccaggctcgggttgcggctgccggccaggttggaggtcagcccgttgttgtagaactcg 240
|||| ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 697 tccaagctggggttgcggctgcctgccaggttggaggtcagcccgttgttgtagaactcg 638
Query: 241 ttgaccagctcggagaactgcgcgaacatgagcttgccgatgttggcgacggcgaggcgg 300
||||| ||||| |||||||||||||||||||||||||| |||||||||| |||||| |||
Sbjct: 637 ttgacgagctccgagaactgcgcgaacatgagcttgccaatgttggcgatggcgagacgg 578
Query: 301 gcgttgtccatggacacgccgatcggggtgccctggaagttgccgccgtgcagcgccttg 360
| ||||||||||||||| ||||| || |||||||||||||||||||| || || ||||||
Sbjct: 577 gtgttgtccatggacacaccgatgggtgtgccctggaagttgccgccatggagtgccttg 518
Query: 361 ccgcggaggacgtcgatgaccgggttgtcgttcacggagttg 402
|| ||| ||||||| ||||| ||||||||||| |||||||||
Sbjct: 517 ccacggtggacgtcaatgactgggttgtcgttgacggagttg 476
>gb|AV926549.1|AV926549 AV926549 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd19m21 5', mRNA sequence
Length = 581
Score = 507 bits (256), Expect = e-142
Identities = 364/400 (91%)
Strand = Plus / Minus
Query: 1 gacatgagcttcaggatgtcgatcgcctcggcggtcttcctggccgagacgaggcccagg 60
|||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||
Sbjct: 400 gacatgagcttcaggatgtccacagcctcggcggtcttcctggccgagacgaggccgaga 341
Query: 61 gagttcacgtcctggttgtgctgctccgcgctctgcacgtggttggtgatggggttgccc 120
||||||||||||||||||||||||||||| ||||| || |||||||| | |||||| |
Sbjct: 340 gagttcacgtcctggttgtgctgctccgcactctggacatggttggtcaccgggttggca 281
Query: 121 aggtactggagctcggagcagtaggacgccatggcgatctcggtgcccttgaacccgtag 180
|||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 280 aggtactggagctcagagcagtaggaagccatggcgatctcggtgcccttgaagccgtag 221
Query: 181 tccaggctcgggttgcggctgccggccaggttggaggtcagcccgttgttgtagaactcg 240
|||| ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 220 tccaagctggggttgcggctgcctgccaggttggaggtcagcccgttgttgtagaactcg 161
Query: 241 ttgaccagctcggagaactgcgcgaacatgagcttgccgatgttggcgacggcgaggcgg 300
||||| ||||| |||||||||||||||||||||||||| |||||||||| |||||| |||
Sbjct: 160 ttgacgagctccgagaactgcgcgaacatgagcttgccaatgttggcgatggcgagacgg 101
Query: 301 gcgttgtccatggacacgccgatcggggtgccctggaagttgccgccgtgcagcgccttg 360
| ||||||||||||||| ||||| || |||||||||||||||||||| || || ||||||
Sbjct: 100 gtgttgtccatggacacaccgatgggtgtgccctggaagttgccgccatggagtgccttg 41
Query: 361 ccgcggaggacgtcgatgaccgggttgtcgttcacggagt 400
|| ||| ||||||| ||||| ||||||||||| |||||||
Sbjct: 40 ccacggtggacgtcaatgactgggttgtcgttgacggagt 1
>gb|BF624772.2|BF624772 HVSMEa0017L07f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0017L07f, mRNA sequence
Length = 759
Score = 504 bits (254), Expect = e-141
Identities = 365/402 (90%)
Strand = Plus / Minus
Query: 1 gacatgagcttcaggatgtcgatcgcctcggcggtcttcctggccgagacgaggcccagg 60
|||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||
Sbjct: 649 gacatgagcttcaggatgtccacagcctcggcggtcttcctggccgagacgaggccgaga 590
Query: 61 gagttcacgtcctggttgtgctgctccgcgctctgcacgtggttggtgatggggttgccc 120
||||||||||||||| ||||||||||||| ||||| || |||||||| | |||||| |
Sbjct: 589 gagttcacgtcctggatgtgctgctccgcactctggacatggttggtcaccgggttggca 530
Query: 121 aggtactggagctcggagcagtaggacgccatggcgatctcggtgcccttgaacccgtag 180
|||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 529 aggtactggagctcagagcagtaggaagccatggcgatctcggtgcccttgaagccgtag 470
Query: 181 tccaggctcgggttgcggctgccggccaggttggaggtcagcccgttgttgtagaactcg 240
|||| ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 469 tccaagctggggttgcggctgcctgccaggttggaggtcagcccgttgttgtagaactcg 410
Query: 241 ttgaccagctcggagaactgcgcgaacatgagcttgccgatgttggcgacggcgaggcgg 300
||||| ||||| |||||||||||||||||||||||||| |||||||||| |||||| |||
Sbjct: 409 ttgacgagctccgagaactgcgcgaacatgagcttgccaatgttggcgatggcgagacgg 350
Query: 301 gcgttgtccatggacacgccgatcggggtgccctggaagttgccgccgtgcagcgccttg 360
| ||||||||||||||| ||||| || |||||||||||||||||||| || || ||||||
Sbjct: 349 gtgttgtccatggacacaccgatgggtgtgccctggaagttgccgccatggagtgccttg 290
Query: 361 ccgcggaggacgtcgatgaccgggttgtcgttcacggagttg 402
|| ||| ||||||| ||||| ||||||||||| |||||||||
Sbjct: 289 ccacggtggacgtcaatgactgggttgtcgttgacggagttg 248
>gb|AV925745.1|AV925745 AV925745 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd25k05 5', mRNA sequence
Length = 671
Score = 504 bits (254), Expect = e-141
Identities = 362/398 (90%)
Strand = Plus / Minus
Query: 1 gacatgagcttcaggatgtcgatcgcctcggcggtcttcctggccgagacgaggcccagg 60
|||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||
Sbjct: 398 gacatgagcttcaggatgtccacagcctcggcggtcttcctggccgagacgaggccgaga 339
Query: 61 gagttcacgtcctggttgtgctgctccgcgctctgcacgtggttggtgatggggttgccc 120
||||||||||||||||||||||||||||| ||||| || |||||||| | |||||| |
Sbjct: 338 gagttcacgtcctggttgtgctgctccgcactctggacatggttggtcaccgggttggca 279
Query: 121 aggtactggagctcggagcagtaggacgccatggcgatctcggtgcccttgaacccgtag 180
|||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 278 aggtactggagctcagagcagtaggaagccatggcgatctcggtgcccttgaagccgtag 219
Query: 181 tccaggctcgggttgcggctgccggccaggttggaggtcagcccgttgttgtagaactcg 240
|||| ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 218 tccaagctggggttgcggctgcctgccaggttggaggtcagcccgttgttgtagaactcg 159
Query: 241 ttgaccagctcggagaactgcgcgaacatgagcttgccgatgttggcgacggcgaggcgg 300
||||| ||||| |||||||||||||||||||||||||| |||||||||| |||||| |||
Sbjct: 158 ttgacgagctccgagaactgcgcgaacatgagcttgccaatgttggcgatggcgagacgg 99
Query: 301 gcgttgtccatggacacgccgatcggggtgccctggaagttgccgccgtgcagcgccttg 360
| ||||||||||||||| ||||| || |||||||||||||||||||| || || ||||||
Sbjct: 98 gtgttgtccatggacacaccgatgggtgtgccctggaagttgccgccatggagtgccttg 39
Query: 361 ccgcggaggacgtcgatgaccgggttgtcgttcacgga 398
|| ||| ||||||| ||||| ||||||||||| |||||
Sbjct: 38 ccacggtggacgtcaatgactgggttgtcgttgacgga 1
>gb|AL505744.1|AL505744 AL505744 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW09G10V 5', mRNA sequence
Length = 500
Score = 498 bits (251), Expect = e-139
Identities = 364/402 (90%)
Strand = Plus / Minus
Query: 1 gacatgagcttcaggatgtcgatcgcctcggcggtcttcctggccgagacgaggcccagg 60
|||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||
Sbjct: 447 gacatgagcttcaggatgtccacagcctcggcggtcttcctggccgagacgaggccgaga 388
Query: 61 gagttcacgtcctggttgtgctgctccgcgctctgcacgtggttggtgatggggttgccc 120
|||||||||||||||||||| |||||||| ||||| || |||||||| | |||||| |
Sbjct: 387 gagttcacgtcctggttgtgntgctccgcactctggacatggttggtcaccgggttggca 328
Query: 121 aggtactggagctcggagcagtaggacgccatggcgatctcggtgcccttgaacccgtag 180
|||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 327 aggtactggagctcagagcagtaggaagccatggcgatctcggtgcccttgaagccgtag 268
Query: 181 tccaggctcgggttgcggctgccggccaggttggaggtcagcccgttgttgtagaactcg 240
|||| ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 267 tccaagctggggttgcggctgcctgccaggttggaggtcagcccgttgttgtagaactcg 208
Query: 241 ttgaccagctcggagaactgcgcgaacatgagcttgccgatgttggcgacggcgaggcgg 300
||||| ||||| |||||||||||||||||||||||||| |||||||||| |||||| |||
Sbjct: 207 ttgacgagctccgagaactgcgcgaacatgagcttgccaatgttggcgatggcgagacgg 148
Query: 301 gcgttgtccatggacacgccgatcggggtgccctggaagttgccgccgtgcagcgccttg 360
| ||||||||||||||| ||||| || |||||||||||||||||||| || || ||||||
Sbjct: 147 gtgttgtccatggacacaccgatgggtgtgccctggaagttgccgccatggagtgccttg 88
Query: 361 ccgcggaggacgtcgatgaccgggttgtcgttcacggagttg 402
|| ||| ||||||| ||||| ||||||||||| ||||||||
Sbjct: 87 ccacggtggacgtcaatgactgggttgtcgttgccggagttg 46
>gb|BI778012.2|BI778012 EBro07_SQ001_N12_R root, 3 week, reduced light, cv Optic, EBro07
Hordeum vulgare subsp. vulgare cDNA clone
EBro07_SQ001_N12 5', mRNA sequence
Length = 415
Score = 496 bits (250), Expect = e-138
Identities = 355/390 (91%)
Strand = Plus / Minus
Query: 1 gacatgagcttcaggatgtcgatcgcctcggcggtcttcctggccgagacgaggcccagg 60
|||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||
Sbjct: 390 gacatgagcttcaggatgtccacagcctcggcggtcttcctggccgagacgaggccgaga 331
Query: 61 gagttcacgtcctggttgtgctgctccgcgctctgcacgtggttggtgatggggttgccc 120
||||||||||||||||||||||||||||| ||||| || |||||||| | |||||| |
Sbjct: 330 gagttcacgtcctggttgtgctgctccgcactctggacatggttggtcaccgggttggca 271
Query: 121 aggtactggagctcggagcagtaggacgccatggcgatctcggtgcccttgaacccgtag 180
|||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 270 aggtactggagctcagagcagtaggaagccatggcgatctcggtgcccttgaagccgtag 211
Query: 181 tccaggctcgggttgcggctgccggccaggttggaggtcagcccgttgttgtagaactcg 240
|||| ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 210 tccaagctggggttgcggctgcctgccaggttggaggtcagcccgttgttgtagaactcg 151
Query: 241 ttgaccagctcggagaactgcgcgaacatgagcttgccgatgttggcgacggcgaggcgg 300
||||| ||||| |||||||||||||||||||||||||| |||||||||| |||||| |||
Sbjct: 150 ttgacgagctccgagaactgcgcgaacatgagcttgccaatgttggcgatggcgagacgg 91
Query: 301 gcgttgtccatggacacgccgatcggggtgccctggaagttgccgccgtgcagcgccttg 360
| ||||||||||||||| ||||| || |||||||||||||||||||| || || ||||||
Sbjct: 90 gtgttgtccatggacacaccgatgggtgtgccctggaagttgccgccatggagtgccttg 31
Query: 361 ccgcggaggacgtcgatgaccgggttgtcg 390
|| ||| ||||||| ||||| |||||||||
Sbjct: 30 ccacggtggacgtcaatgactgggttgtcg 1
>gb|CK122468.1|CK122468 BES1824103j12 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010J123 5-PRIME, mRNA sequence
Length = 779
Score = 496 bits (250), Expect = e-138
Identities = 362/400 (90%)
Strand = Plus / Minus
Query: 3 catgagcttcaggatgtcgatcgcctcggcggtcttcctggccgagacgaggcccaggga 62
|||||||||||||||||| | ||||||||||| |||||| ||||||||||||| || ||
Sbjct: 779 catgagcttcaggatgtccacagcctcggcggttttcctgnccgagacgaggccgagaga 720
Query: 63 gttcacgtcctggttgtgctgctccgcgctctgcacgtggttggtgatggggttgcccag 122
||||||||||||||||||||||||||| ||||| || |||||||| | |||||| | ||
Sbjct: 719 gttcacgtcctggttgtgctgctccgcactctggacatggttggtcaccgggttgncaag 660
Query: 123 gtactggagctcggagcagtaggacgccatggcgatctcggtgcccttgaacccgtagtc 182
|||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 659 gtactggagctcagagcagtaggaagccatggcgatctcggtgcccttgaagccgtagtc 600
Query: 183 caggctcgggttgcggctgccggccaggttggaggtcagcccgttgttgtagaactcgtt 242
|| ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 599 caagctggggttgcggctgcctgccaggttggaggtcagcccgttgttgtagaactcgtt 540
Query: 243 gaccagctcggagaactgcgcgaacatgagcttgccgatgttggcgacggcgaggcgggc 302
||| ||||| |||||||||||||||||||||||||| |||||||||| |||||| ||||
Sbjct: 539 gacgagctccgagaactgcgcgaacatgagcttgccaatgttggcgatggcgagacgggt 480
Query: 303 gttgtccatggacacgccgatcggggtgccctggaagttgccgccgtgcagcgccttgcc 362
||||||||||||||| ||||| || |||||||||||||||||||| || || ||||||||
Sbjct: 479 gttgtccatggacacaccgatgggtgtgccctggaagttgccgccatggagtgccttgcc 420
Query: 363 gcggaggacgtcgatgaccgggttgtcgttcacggagttg 402
||| ||||||| ||||| ||||||||||| |||||||||
Sbjct: 419 acggtggacgtcaatgactgggttgtcgttgacggagttg 380
>gb|AV926550.1|AV926550 AV926550 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd19m22 5', mRNA sequence
Length = 552
Score = 494 bits (249), Expect = e-138
Identities = 356/392 (90%)
Strand = Plus / Minus
Query: 1 gacatgagcttcaggatgtcgatcgcctcggcggtcttcctggccgagacgaggcccagg 60
|||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||
Sbjct: 392 gacatgagcttcaggatgtccacagcctcggcggtcttcctggccgagacgaggccgaga 333
Query: 61 gagttcacgtcctggttgtgctgctccgcgctctgcacgtggttggtgatggggttgccc 120
||||||||||||||||||||||||||||| ||||| || |||||||| | |||||| |
Sbjct: 332 gagttcacgtcctggttgtgctgctccgcactctggacatggttggtcaccgggttggca 273
Query: 121 aggtactggagctcggagcagtaggacgccatggcgatctcggtgcccttgaacccgtag 180
|||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 272 aggtactggagctcagagcagtaggaagccatggcgatctcggtgcccttgaagccgtag 213
Query: 181 tccaggctcgggttgcggctgccggccaggttggaggtcagcccgttgttgtagaactcg 240
|||| ||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 212 tccaagctggggttncggctgcctgccaggttggaggtcagcccgttgttgtagaactcg 153
Query: 241 ttgaccagctcggagaactgcgcgaacatgagcttgccgatgttggcgacggcgaggcgg 300
||||| ||||| |||||||||||||||||||||||||| |||||||||| |||||| |||
Sbjct: 152 ttgacgagctccgagaactgcgcgaacatgagcttgccaatgttggcgatggcgagacgg 93
Query: 301 gcgttgtccatggacacgccgatcggggtgccctggaagttgccgccgtgcagcgccttg 360
| ||||||||||||||| ||||| || |||||||||||||||||||| || || ||||||
Sbjct: 92 gtgttgtccatggacacaccgatgggtgtgccctggaagttgccgccatggagtgccttg 33
Query: 361 ccgcggaggacgtcgatgaccgggttgtcgtt 392
|| ||| ||||||| ||||| |||||||||||
Sbjct: 32 ccacggtggacgtcaatgactgggttgtcgtt 1
>gb|BF260697.2|BF260697 HVSMEf0022L07f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0022L07f, mRNA sequence
Length = 814
Score = 488 bits (246), Expect = e-136
Identities = 362/401 (90%)
Strand = Plus / Minus
Query: 2 acatgagcttcaggatgtcgatcgcctcggcggtcttcctggccgagacgaggcccaggg 61
||||||||||||| ||||| | |||||| |||||||||||||||||||||||| || |
Sbjct: 647 acatgagcttcagnatgtccacagcctcgctggtcttcctggccgagacgaggccgagag 588
Query: 62 agttcacgtcctggttgtgctgctccgcgctctgcacgtggttggtgatggggttgccca 121
|||||||||||||||||||||||||||| ||||| || |||||||| | |||||| | |
Sbjct: 587 agttcacgtcctggttgtgctgctccgcactctggacatggttggtcaccgggttggcaa 528
Query: 122 ggtactggagctcggagcagtaggacgccatggcgatctcggtgcccttgaacccgtagt 181
||||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||||
Sbjct: 527 ggtactggagctcagagcagtaggaagccatggcgatctcggtgcccttgaagccgtagt 468
Query: 182 ccaggctcgggttgcggctgccggccaggttggaggtcagcccgttgttgtagaactcgt 241
||| ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 467 ccaagctggggttgcggctgcctgccaggttggaggtcagcccgttgttgtagaactcgt 408
Query: 242 tgaccagctcggagaactgcgcgaacatgagcttgccgatgttggcgacggcgaggcggg 301
|||| ||||| |||||||||||||||||||||||||| |||||||||| |||||| ||||
Sbjct: 407 tgacgagctccgagaactgcgcgaacatgagcttgccaatgttggcgatggcgagacggg 348
Query: 302 cgttgtccatggacacgccgatcggggtgccctggaagttgccgccgtgcagcgccttgc 361
||||||||||||||| ||||| || |||||||||||||||||||| || || |||||||
Sbjct: 347 tgttgtccatggacacaccgatgggtgtgccctggaagttgccgccatggagtgccttgc 288
Query: 362 cgcggaggacgtcgatgaccgggttgtcgttcacggagttg 402
| ||| ||||||| ||||| ||||||||||| |||||||||
Sbjct: 287 cacggtggacgtcaatgactgggttgtcgttgacggagttg 247
>gb|BI959668.1|BI959668 HVSMEn0020K24f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0020K24f, mRNA sequence
Length = 655
Score = 488 bits (246), Expect = e-136
Identities = 345/378 (91%)
Strand = Plus / Minus
Query: 25 gcctcggcggtcttcctggccgagacgaggcccagggagttcacgtcctggttgtgctgc 84
|||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 649 gcctcggcggtcttcctggccgagacgaggccgagagagttcacgtcctggttgtgctgc 590
Query: 85 tccgcgctctgcacgtggttggtgatggggttgcccaggtactggagctcggagcagtag 144
||||| ||||| || |||||||| | |||||| | |||||||||||||| |||||||||
Sbjct: 589 tccgcactctggacatggttggtcaccgggttggcaaggtactggagctcagagcagtag 530
Query: 145 gacgccatggcgatctcggtgcccttgaacccgtagtccaggctcgggttgcggctgccg 204
|| |||||||||||||||||||||||||| |||||||||| ||| ||||||||||||||
Sbjct: 529 gaagccatggcgatctcggtgcccttgaagccgtagtccaagctggggttgcggctgcct 470
Query: 205 gccaggttggaggtcagcccgttgttgtagaactcgttgaccagctcggagaactgcgcg 264
||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 469 gccaggttggaggtcagcccgttgttgtagaactcgttgacgagctccgagaactgcgcg 410
Query: 265 aacatgagcttgccgatgttggcgacggcgaggcgggcgttgtccatggacacgccgatc 324
|||||||||||||| |||||||||| |||||| |||| ||||||||||||||| |||||
Sbjct: 409 aacatgagcttgccaatgttggcgatggcgagacgggtgttgtccatggacacaccgatg 350
Query: 325 ggggtgccctggaagttgccgccgtgcagcgccttgccgcggaggacgtcgatgaccggg 384
|| |||||||||||||||||||| || || |||||||| ||| ||||||| ||||| |||
Sbjct: 349 ggtgtgccctggaagttgccgccatggagtgccttgccacggtggacgtcaatgactggg 290
Query: 385 ttgtcgttcacggagttg 402
|||||||| |||||||||
Sbjct: 289 ttgtcgttgacggagttg 272
>gb|BI960417.1|BI960417 HVSMEn0024I12f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0024I12f, mRNA sequence
Length = 659
Score = 476 bits (240), Expect = e-133
Identities = 345/380 (90%)
Strand = Plus / Minus
Query: 1 gacatgagcttcaggatgtcgatcgcctcggcggtcttcctggccgagacgaggcccagg 60
|||||||||||||||||||| | |||||| ||||||||||||||||||||||||| ||
Sbjct: 553 gacatgagcttcaggatgtccacagcctcgccggtcttcctggccgagacgaggccgaga 494
Query: 61 gagttcacgtcctggttgtgctgctccgcgctctgcacgtggttggtgatggggttgccc 120
||||||||||||||||||||||||||||| ||||| || |||||||| | |||||| |
Sbjct: 493 gagttcacgtcctggttgtgctgctccgcactctggacatggttggtcaccgggttggca 434
Query: 121 aggtactggagctcggagcagtaggacgccatggcgatctcggtgcccttgaacccgtag 180
|||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 433 aggtactggagctcagagcagtaggaagccatggcgatctcggtgcccttgaagccgtag 374
Query: 181 tccaggctcgggttgcggctgccggccaggttggaggtcagcccgttgttgtagaactcg 240
|||| ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 373 tccaagctggggttgcggctgcctgccaggttggaggtcagcccgttgttgtagaactcg 314
Query: 241 ttgaccagctcggagaactgcgcgaacatgagcttgccgatgttggcgacggcgaggcgg 300
||||| ||||| |||||||||||||||||||||||||| |||||||||| |||||| |||
Sbjct: 313 ttgacgagctccgagaactgcgcgaacatgagcttgccaatgttggcgatggcgagacgg 254
Query: 301 gcgttgtccatggacacgccgatcggggtgccctggaagttgccgccgtgcagcgccttg 360
| ||||||||||||||| ||||| || |||||||||||||||||||| || || ||||||
Sbjct: 253 gtgttgtccatggacacaccgatgggtgtgccctggaagttgccgccatggagtgccttg 194
Query: 361 ccgcggaggacgtcgatgac 380
|| ||| ||||||| |||||
Sbjct: 193 ccacggtggacgtcaatgac 174
>gb|AV923557.1|AV923557 AV923557 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd13j05 5', mRNA sequence
Length = 550
Score = 456 bits (230), Expect = e-127
Identities = 329/362 (90%)
Strand = Plus / Minus
Query: 41 tggccgagacgaggcccagggagttcacgtcctggttgtgctgctccgcgctctgcacgt 100
|||||||||||||||| || ||||||||||||||||||||||||||||| ||||| || |
Sbjct: 550 tggccgagacgaggccgagagagttcacgtcctggttgtgctgctccgcactctggacat 491
Query: 101 ggttggtgatggggttgcccaggtactggagctcggagcagtaggacgccatggcgatct 160
||||||| | |||||| | |||||||||||||| ||||||||||| |||||||||||||
Sbjct: 490 ggttggtcaccgggttggcaaggtactggagctcagagcagtaggaagccatggcgatct 431
Query: 161 cggtgcccttgaacccgtagtccaggctcgggttgcggctgccggccaggttggaggtca 220
||||||||||||| |||||||||| ||| |||||||||||||| ||||||||||||||||
Sbjct: 430 cggtgcccttgaagccgtagtccaagctggggttgcggctgcctgccaggttggaggtca 371
Query: 221 gcccgttgttgtagaactcgttgaccagctcggagaactgcgcgaacatgagcttgccga 280
||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| |
Sbjct: 370 gcccgttgttgtagaactcgttgacgagctccgagaactgcgcgaacatgagcttgccaa 311
Query: 281 tgttggcgacggcgaggcgggcgttgtccatggacacgccgatcggggtgccctggaagt 340
||||||||| |||||| |||| ||||||||||||||| ||||| || |||||||||||||
Sbjct: 310 tgttggcgatggcgagacgggtgttgtccatggacacaccgatgggtgtgccctggaagt 251
Query: 341 tgccgccgtgcagcgccttgccgcggaggacgtcgatgaccgggttgtcgttcacggagt 400
||||||| || || |||||||| ||| ||||||| ||||| ||||||||||| |||||||
Sbjct: 250 tgccgccatggagtgccttgccacggtggacgtcaatgactgggttgtcgttgacggagt 191
Query: 401 tg 402
||
Sbjct: 190 tg 189
>gb|CA021868.1|CA021868 HZ41G07r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ41G07
5-PRIME, mRNA sequence
Length = 386
Score = 444 bits (224), Expect = e-123
Identities = 323/356 (90%)
Strand = Plus / Minus
Query: 47 agacgaggcccagggagttcacgtcctggttgtgctgctccgcgctctgcacgtggttgg 106
|||||||||| || ||||||||||||||||||||||||||||| ||||| || |||||||
Sbjct: 386 agacgaggccgagagagttcacgtcctggttgtgctgctccgcactctggacatggttgg 327
Query: 107 tgatggggttgcccaggtactggagctcggagcagtaggacgccatggcgatctcggtgc 166
| | |||||| | |||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct: 326 tcaccgggttggcaaggtactggagctcagagcagtaggaagccatggcgatctcggtgc 267
Query: 167 ccttgaacccgtagtccaggctcgggttgcggctgccggccaggttggaggtcagcccgt 226
||||||| |||||||||| ||| |||||||||||||| ||||||||||||||||||||||
Sbjct: 266 ccttgaagccgtagtccaagctggggttgcggctgcctgccaggttggaggtcagcccgt 207
Query: 227 tgttgtagaactcgttgaccagctcggagaactgcgcgaacatgagcttgccgatgttgg 286
||||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||
Sbjct: 206 tgttgtagaactcgttgacgagctccgagaactgcgcgaacatgagcttgccaatgttgg 147
Query: 287 cgacggcgaggcgggcgttgtccatggacacgccgatcggggtgccctggaagttgccgc 346
||| |||||| |||| ||||||||||||||| ||||| || |||||||||||||||||||
Sbjct: 146 cgatggcgagacgggtgttgtccatggacacaccgatgggtgtgccctggaagttgccgc 87
Query: 347 cgtgcagcgccttgccgcggaggacgtcgatgaccgggttgtcgttcacggagttg 402
| || || |||||||| ||| ||||||| ||||| ||||||||||| |||||||||
Sbjct: 86 catggagtgccttgccacggtggacgtcaatgactgggttgtcgttgacggagttg 31
>gb|BI953765.1|BI953765 HVSMEm0014E15f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0014E15f, mRNA sequence
Length = 636
Score = 400 bits (202), Expect = e-110
Identities = 298/330 (90%)
Strand = Plus / Minus
Query: 73 tggttgtgctgctccgcgctctgcacgtggttggtgatggggttgcccaggtactggagc 132
|||||||||||||| || ||||| || |||||||| | |||||| | ||||||||||||
Sbjct: 636 tggttgtgctgctcggcactctggacatggttggtcaccgggttggcaaggtactggagc 577
Query: 133 tcggagcagtaggacgccatggcgatctcggtgcccttgaacccgtagtccaggctcggg 192
|| ||||||||||| |||||||||||||||||||||||||| |||||||||| ||| |||
Sbjct: 576 tcagagcagtaggaagccatggcgatctcggtgcccttgaagccgtagtccaagctgggg 517
Query: 193 ttgcggctgccggccaggttggaggtcagcccgttgttgtagaactcgttgaccagctcg 252
||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 516 ttgcggctgcctgccaggttggaggtcagcccgttgttgtagaactcgttgacgagctcc 457
Query: 253 gagaactgcgcgaacatgagcttgccgatgttggcgacggcgaggcgggcgttgtccatg 312
|||||||||||||||||||||||||| |||||||||| |||||| |||| ||||||||||
Sbjct: 456 gagaactgcgcgaacatgagcttgccaatgttggcgatggcgagacgggtgttgtccatg 397
Query: 313 gacacgccgatcggggtgccctggaagttgccgccgtgcagcgccttgccgcggaggacg 372
||||| ||||| || |||||||||||||||||||| || || |||||||| ||| |||||
Sbjct: 396 gacacaccgatgggtgtgccctggaagttgccgccatggagtgccttgccacggtggacg 337
Query: 373 tcgatgaccgggttgtcgttcacggagttg 402
|| ||||| ||||||||||| |||||||||
Sbjct: 336 tcaatgactgggttgtcgttgacggagttg 307
>gb|BI957636.1|BI957636 HVSMEn0010H09f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0010H09f, mRNA sequence
Length = 637
Score = 398 bits (201), Expect = e-109
Identities = 276/301 (91%)
Strand = Plus / Minus
Query: 1 gacatgagcttcaggatgtcgatcgcctcggcggtcttcctggccgagacgaggcccagg 60
|||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||
Sbjct: 301 gacatgagcttcaggatgtccacagcctcggcggtcttcctggccgagacgaggccgaga 242
Query: 61 gagttcacgtcctggttgtgctgctccgcgctctgcacgtggttggtgatggggttgccc 120
||||||||||||||||||||||||||||| ||||| || |||||||| | |||||| |
Sbjct: 241 gagttcacgtcctggttgtgctgctccgcactctggacatggttggtcaccgggttggca 182
Query: 121 aggtactggagctcggagcagtaggacgccatggcgatctcggtgcccttgaacccgtag 180
|||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 181 aggtactggagctcagagcagtaggaagccatggcgatctcggtgcccttgaagccgtag 122
Query: 181 tccaggctcgggttgcggctgccggccaggttggaggtcagcccgttgttgtagaactcg 240
|||| ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 121 tccaagctggggttgcggctgcctgccaggttggaggtcagcccgttgttgtagaactcg 62
Query: 241 ttgaccagctcggagaactgcgcgaacatgagcttgccgatgttggcgacggcgaggcgg 300
||||| ||||| ||||||||||||||||||||||| || |||||||||| |||||| |||
Sbjct: 61 ttgacgagctccgagaactgcgcgaacatgagcttcccaatgttggcgatggcgagacgg 2
Query: 301 g 301
|
Sbjct: 1 g 1
>gb|BI958535.1|BI958535 HVSMEn0015H19f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0015H19f, mRNA sequence
Length = 643
Score = 396 bits (200), Expect = e-109
Identities = 281/308 (91%)
Strand = Plus / Minus
Query: 1 gacatgagcttcaggatgtcgatcgcctcggcggtcttcctggccgagacgaggcccagg 60
|||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||
Sbjct: 308 gacatgagcttcaggatgtccacagcctcggcggtcttcctggccgagacgaggccgaga 249
Query: 61 gagttcacgtcctggttgtgctgctccgcgctctgcacgtggttggtgatggggttgccc 120
||||||||||||||||||||||||||||| ||||| || |||||||| | |||||| |
Sbjct: 248 gagttcacgtcctggttgtgctgctccgcactctggacatggttggtcaccgggttggca 189
Query: 121 aggtactggagctcggagcagtaggacgccatggcgatctcggtgcccttgaacccgtag 180
|||||||||||||| ||||||||| | |||||||||||||||||||||||||| ||||||
Sbjct: 188 aggtactggagctcagagcagtagcaagccatggcgatctcggtgcccttgaagccgtag 129
Query: 181 tccaggctcgggttgcggctgccggccaggttggaggtcagcccgttgttgtagaactcg 240
|||| ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 128 tccaagctggggttgcggctgcctgccaggttggaggtcagcccgttgttgtagaactcg 69
Query: 241 ttgaccagctcggagaactgcgcgaacatgagcttgccgatgttggcgacggcgaggcgg 300
||||| ||||| |||||||||||||||||||||||||| |||||||||| ||||| |||
Sbjct: 68 ttgacgagctccgagaactgcgcgaacatgagcttgccaatgttggcgatggcgacccgg 9
Query: 301 gcgttgtc 308
| ||||||
Sbjct: 8 gtgttgtc 1
>gb|BI960176.1|BI960176 HVSMEn0023I19f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0023I19f, mRNA sequence
Length = 644
Score = 383 bits (193), Expect = e-104
Identities = 286/317 (90%)
Strand = Plus / Minus
Query: 86 ccgcgctctgcacgtggttggtgatggggttgcccaggtactggagctcggagcagtagg 145
|||| ||||| || |||||||| | |||||| | |||||||||||||| ||||||||||
Sbjct: 643 ccgcactctggacatggttggtcaccgggttggcaaggtactggagctcagagcagtagg 584
Query: 146 acgccatggcgatctcggtgcccttgaacccgtagtccaggctcgggttgcggctgccgg 205
| |||||||||||||||||||||||||| |||||||||| ||| |||||||||||||| |
Sbjct: 583 aagccatggcgatctcggtgcccttgaagccgtagtccaagctggggttgcggctgcctg 524
Query: 206 ccaggttggaggtcagcccgttgttgtagaactcgttgaccagctcggagaactgcgcga 265
|||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 523 ccaggttggaggtcagcccgttgttgtagaactcgttgacgagctccgagaactgcgcga 464
Query: 266 acatgagcttgccgatgttggcgacggcgaggcgggcgttgtccatggacacgccgatcg 325
||||||||||||| |||||||||| |||||| |||| ||||||||||||||| ||||| |
Sbjct: 463 acatgagcttgccaatgttggcgatggcgagacgggtgttgtccatggacacaccgatgg 404
Query: 326 gggtgccctggaagttgccgccgtgcagcgccttgccgcggaggacgtcgatgaccgggt 385
| |||||||||||||||||||| || || |||||||| ||| ||||||| ||||| ||||
Sbjct: 403 gtgtgccctggaagttgccgccatggagtgccttgccacggtggacgtcaatgactgggt 344
Query: 386 tgtcgttcacggagttg 402
||||||| |||||||||
Sbjct: 343 tgtcgttgacggagttg 327
>gb|BU994828.1|BU994828 HM08F11r HM Hordeum vulgare subsp. vulgare cDNA clone HM08F11
5-PRIME, mRNA sequence
Length = 642
Score = 363 bits (183), Expect = 9e-099
Identities = 252/275 (91%)
Strand = Plus / Minus
Query: 128 ggagctcggagcagtaggacgccatggcgatctcggtgcccttgaacccgtagtccaggc 187
||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||| ||
Sbjct: 642 ggagctcagagcagtaggaagccatggcgatctcggtgcccttgaagccgtagtccaagc 583
Query: 188 tcgggttgcggctgccggccaggttggaggtcagcccgttgttgtagaactcgttgacca 247
| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 582 tggggttgcggctgcctgccaggttggaggtcagcccgttgttgtagaactcgttgacga 523
Query: 248 gctcggagaactgcgcgaacatgagcttgccgatgttggcgacggcgaggcgggcgttgt 307
|||| |||||||||||||||||||||||||| |||||||||| |||||| |||| |||||
Sbjct: 522 gctccgagaactgcgcgaacatgagcttgccaatgttggcgatggcgagacgggtgttgt 463
Query: 308 ccatggacacgccgatcggggtgccctggaagttgccgccgtgcagcgccttgccgcgga 367
|||||||||| ||||| || |||||||||||||||||||| || || |||||||| |||
Sbjct: 462 ccatggacacaccgatgggtgtgccctggaagttgccgccatggagtgccttgccacggt 403
Query: 368 ggacgtcgatgaccgggttgtcgttcacggagttg 402
||||||| ||||| ||||||||||| |||||||||
Sbjct: 402 ggacgtcaatgactgggttgtcgttgacggagttg 368
>gb|BG414724.1|BG414724 HVSMEk0003I17f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0003I17f, mRNA sequence
Length = 888
Score = 361 bits (182), Expect = 4e-098
Identities = 304/342 (88%), Gaps = 2/342 (0%)
Strand = Plus / Minus
Query: 62 agttcacgtcctggttgtgctgctccgcgctctgcacgtggttggtgatggggttgccca 121
||||||||||||||||||| |||||||| ||||| || |||||||| | |||||| | |
Sbjct: 716 agttcacgtcctggttgtgttgctccgcactctggacatggttggtcaccgggttggcaa 657
Query: 122 ggtactgga-gctcggagcagtaggacgccatggcgatctcggtgcccttgaacccgtag 180
|| |||||| |||| ||||||||||| ||||||||||||||||||||||| | |||||||
Sbjct: 656 gg-actggaagctcagagcagtaggaagccatggcgatctcggtgcccttaagcccgtag 598
Query: 181 tccaggctcgggttgcggctgccggccaggttggaggtcagcccgttgttgtagaactcg 240
|||| | | ||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 597 tccaagttggggttgcggctgcttgccaggttggaggtcagcccgttgttgtagaactcg 538
Query: 241 ttgaccagctcggagaactgcgcgaacatgagcttgccgatgttggcgacggcgaggcgg 300
||||| ||||| |||||||||||||||||||||||||| |||||||||| |||||| |||
Sbjct: 537 ttgacgagctccgagaactgcgcgaacatgagcttgccaatgttggcgatggcgagacgg 478
Query: 301 gcgttgtccatggacacgccgatcggggtgccctggaagttgccgccgtgcagcgccttg 360
| ||||||||||||||| ||||| || ||||| |||||||||||||| || || ||||||
Sbjct: 477 gtgttgtccatggacacaccgatgggtgtgccttggaagttgccgccatggagtgccttg 418
Query: 361 ccgcggaggacgtcgatgaccgggttgtcgttcacggagttg 402
|| ||| ||||||| ||||| ||||||||||| |||||||||
Sbjct: 417 ccacggtggacgtcaatgactgggttgtcgttgacggagttg 376
>gb|BI957150.1|BI957150 HVSMEn0007M14f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0007M14f, mRNA sequence
Length = 1117
Score = 349 bits (176), Expect = 1e-094
Identities = 338/392 (86%)
Strand = Plus / Minus
Query: 1 gacatgagcttcaggatgtcgatcgcctcggcggtcttcctggccgagacgaggcccagg 60
|||||||| ||||||||||| | |||||||||||||||||||||||||||||||| ||
Sbjct: 506 gacatgagtttcaggatgtccacagcctcggcggtcttcctggccgagacgaggccgaga 447
Query: 61 gagttcacgtcctggttgtgctgctccgcgctctgcacgtggttggtgatggggttgccc 120
||||||||||||||||||||||||||||| ||||| || |||||||| | |||||| |
Sbjct: 446 gagttcacgtcctggttgtgctgctccgcactctggacatggttggtcaccgggttggca 387
Query: 121 aggtactggagctcggagcagtaggacgccatggcgatctcggtgcccttgaacccgtag 180
||||| |||||||| ||||||||| | |||||| ||||||||||| ||||||| | ||||
Sbjct: 386 aggtaatggagctcagagcagtagaaagccatgtcgatctcggtgtccttgaagcagtag 327
Query: 181 tccaggctcgggttgcggctgccggccaggttggaggtcagcccgttgttgtagaactcg 240
|||| ||| |||||| ||||||| | ||||||| ||||||||||||||||||||||||||
Sbjct: 326 tccaagctggggttgaggctgcctgacaggttgtaggtcagcccgttgttgtagaactcg 267
Query: 241 ttgaccagctcggagaactgcgcgaacatgagcttgccgatgttggcgacggcgaggcgg 300
| ||| ||||| |||| |||| |||||||||||||||| || ||| ||| | || |||
Sbjct: 266 tagacgagctccgagagctgcacgaacatgagcttgccaatcttgacgatgttgatacgg 207
Query: 301 gcgttgtccatggacacgccgatcggggtgccctggaagttgccgccgtgcagcgccttg 360
| ||||||||||||||| ||||| || |||||||||||||||||||| || || |||| |
Sbjct: 206 gtgttgtccatggacacaccgatgggtgtgccctggaagttgccgccatggagtgcctcg 147
Query: 361 ccgcggaggacgtcgatgaccgggttgtcgtt 392
|| ||| | ||||| ||||| |||||||||||
Sbjct: 146 ccacggtgaacgtcaatgactgggttgtcgtt 115
>gb|BI959468.1|BI959468 HVSMEn0019M15f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0019M15f, mRNA sequence
Length = 653
Score = 347 bits (175), Expect = 5e-094
Identities = 238/259 (91%)
Strand = Plus / Minus
Query: 1 gacatgagcttcaggatgtcgatcgcctcggcggtcttcctggccgagacgaggcccagg 60
|||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||
Sbjct: 287 gacatgagcttcaggatgtccacagcctcggcggtcttcctggccgagacgaggccgaga 228
Query: 61 gagttcacgtcctggttgtgctgctccgcgctctgcacgtggttggtgatggggttgccc 120
||||||||||||||||||||||||||||| ||||| || |||||||| | |||||| |
Sbjct: 227 gagttcacgtcctggttgtgctgctccgcactctggacatggttggtcaccgggttggca 168
Query: 121 aggtactggagctcggagcagtaggacgccatggcgatctcggtgcccttgaacccgtag 180
|||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 167 aggtactggagctcagagcagtaggaagccatggcgatctcggtgcccttgaagccgtag 108
Query: 181 tccaggctcgggttgcggctgccggccaggttggaggtcagcccgttgttgtagaactcg 240
|||| ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 107 tccaagctggggttgcggctgcctgccaggttggaggtcagcccgttgttgtagaactcg 48
Query: 241 ttgaccagctcggagaact 259
||||| ||||| |||||||
Sbjct: 47 ttgacgagctccgagaact 29
>gb|BQ471843.1|BQ471843 HV03K13r HV Hordeum vulgare subsp. vulgare cDNA clone HV03K13
5-PRIME, mRNA sequence
Length = 494
Score = 337 bits (170), Expect = 5e-091
Identities = 233/254 (91%)
Strand = Plus / Minus
Query: 149 ccatggcgatctcggtgcccttgaacccgtagtccaggctcgggttgcggctgccggcca 208
||||||||||||||||||||||||| |||||||||| ||| |||||||||||||| ||||
Sbjct: 494 ccatggcgatctcggtgcccttgaagccgtagtccaagctggggttgcggctgcctgcca 435
Query: 209 ggttggaggtcagcccgttgttgtagaactcgttgaccagctcggagaactgcgcgaaca 268
||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 434 ggttggaggtcagcccgttgttgtagaactcgttgacgagctccgagaactgcgcgaaca 375
Query: 269 tgagcttgccgatgttggcgacggcgaggcgggcgttgtccatggacacgccgatcgggg 328
|||||||||| |||||||||| |||||| |||| ||||||||||||||| ||||| || |
Sbjct: 374 tgagcttgccaatgttggcgatggcgagacgggtgttgtccatggacacaccgatgggtg 315
Query: 329 tgccctggaagttgccgccgtgcagcgccttgccgcggaggacgtcgatgaccgggttgt 388
||||||||||||||||||| || || |||||||| ||| ||||||| ||||| |||||||
Sbjct: 314 tgccctggaagttgccgccatggagtgccttgccacggtggacgtcaatgactgggttgt 255
Query: 389 cgttcacggagttg 402
|||| |||||||||
Sbjct: 254 cgttgacggagttg 241
>gb|BI958009.1|BI958009 HVSMEn0012N24f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0012N24f, mRNA sequence
Length = 798
Score = 321 bits (162), Expect = 3e-086
Identities = 228/250 (91%)
Strand = Plus / Minus
Query: 153 ggcgatctcggtgcccttgaacccgtagtccaggctcgggttgcggctgccggccaggtt 212
||||||||||||||| ||||| |||||||||| ||| |||||||||||||| ||||||||
Sbjct: 494 ggcgatctcggtgcctttgaagccgtagtccaagctggggttgcggctgcctgccaggtt 435
Query: 213 ggaggtcagcccgttgttgtagaactcgttgaccagctcggagaactgcgcgaacatgag 272
||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 434 ggaggtcagcccgttgttgtagaactcgttgacgagctccgagaactgcgcgaacatgag 375
Query: 273 cttgccgatgttggcgacggcgaggcgggcgttgtccatggacacgccgatcggggtgcc 332
|||||| |||||||||| |||||| |||| ||||||||||||||| ||||| || |||||
Sbjct: 374 cttgccaatgttggcgatggcgagacgggtgttgtccatggacacaccgatgggtgtgcc 315
Query: 333 ctggaagttgccgccgtgcagcgccttgccgcggaggacgtcgatgaccgggttgtcgtt 392
||||||||||||||| || || |||||||| ||| ||||||| ||||| |||||||||||
Sbjct: 314 ctggaagttgccgccatggagtgccttgccacggtggacgtcaatgactgggttgtcgtt 255
Query: 393 cacggagttg 402
|||||||||
Sbjct: 254 gacggagttg 245
>gb|BI957856.1|BI957856 HVSMEn0011M08f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0011M08f, mRNA sequence
Length = 858
Score = 305 bits (154), Expect = 2e-081
Identities = 241/266 (90%), Gaps = 3/266 (1%)
Strand = Plus / Minus
Query: 139 cagtaggacgccatggcgatctcggtgcccttgaacccgtagtccaggctcgggttgcgg 198
|||||||| |||||||||||||||||||| |||||||||||||||| ||| |||||||||
Sbjct: 650 cagtaggaagccatggcgatctcggtgcc-ttgaacccgtagtccaagctggggttgcgg 592
Query: 199 ctgccg-gccaggttggaggtcagccc-gttgttgtagaactcgttgaccagctcggaga 256
||||| |||||||||||||||||||| ||||||||||||||||||||| ||||| ||||
Sbjct: 591 ctgccctgccaggttggaggtcagccccgttgttgtagaactcgttgacgagctccgaga 532
Query: 257 actgcgcgaacatgagcttgccgatgttggcgacggcgaggcgggcgttgtccatggaca 316
|||||||||||||||||| ||| |||||||||| |||||| |||| ||||||||||||||
Sbjct: 531 actgcgcgaacatgagctcgccaatgttggcgatggcgagacgggtgttgtccatggaca 472
Query: 317 cgccgatcggggtgccctggaagttgccgccgtgcagcgccttgccgcggaggacgtcga 376
| ||||| || |||||||||||||||||||| || || |||||||| ||| ||||||| |
Sbjct: 471 caccgatgggtgtgccctggaagttgccgccatggagtgccttgccacggtggacgtcaa 412
Query: 377 tgaccgggttgtcgttcacggagttg 402
|||| ||||||||||| |||||||||
Sbjct: 411 tgactgggttgtcgttgacggagttg 386
>gb|AL505894.1|AL505894 AL505894 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW09N10V 5', mRNA sequence
Length = 463
Score = 299 bits (151), Expect = 1e-079
Identities = 339/402 (84%)
Strand = Plus / Minus
Query: 1 gacatgagcttcaggatgtcgatcgcctcggcggtcttcctggccgagacgaggcccagg 60
||||||| |||||||||||| || |||||||| |||||||||| |||| || || ||
Sbjct: 410 gacatgatcttcaggatgtcaatagcctcggcagtcttcctggatgagatcagaccaagt 351
Query: 61 gagttcacgtcctggttgtgctgctccgcgctctgcacgtggttggtgatggggttgccc 120
|||||||| |||||||||||||||||||||||||| || |||||||| | |||||||||
Sbjct: 350 gagttcacatcctggttgtgctgctccgcgctctggacatggttggtcaccgggttgccc 291
Query: 121 aggtactggagctcggagcagtaggacgccatggcgatctcggtgcccttgaacccgtag 180
| | |||| ||||| |||||||| || |||||||||||||||| ||||||||| || |||
Sbjct: 290 aagaactgcagctcagagcagtatgaggccatggcgatctcggcgcccttgaaaccatag 231
Query: 181 tccaggctcgggttgcggctgccggccaggttggaggtcagcccgttgttgtagaactcg 240
|||| |||||||||||| | |||| ||||||||| | ||| || ||||||||||| |||
Sbjct: 230 tccaagctcgggttgcgcccaccggacaggttggaaggcaggccattgttgtagaagtcg 171
Query: 241 ttgaccagctcggagaactgcgcgaacatgagcttgccgatgttggcgacggcgaggcgg 300
|| || ||||| |||||||| |||||||| |||||||| || || | ||||||||||
Sbjct: 170 ttcacgagctccgagaactgggcgaacatcagcttgccaatagcagcaatggcgaggcgg 111
Query: 301 gcgttgtccatggacacgccgatcggggtgccctggaagttgccgccgtgcagcgccttg 360
| |||||||||||| || ||||| |||||||| ||||||||||| ||||| | ||||||
Sbjct: 110 gtgttgtccatggagacaccgatgggggtgccttggaagttgccaccgtggatagccttg 51
Query: 361 ccgcggaggacgtcgatgaccgggttgtcgttcacggagttg 402
|| ||| ||||||||||| |||||||||||| || ||||||
Sbjct: 50 ccacgggagacgtcgatgancgggttgtcgttgacagagttg 9
>gb|AL503572.1|AL503572 AL503572 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW02K13T 5', mRNA sequence
Length = 700
Score = 297 bits (150), Expect = 5e-079
Identities = 339/402 (84%)
Strand = Plus / Minus
Query: 1 gacatgagcttcaggatgtcgatcgcctcggcggtcttcctggccgagacgaggcccagg 60
||||||| |||||||||||| || |||||||| |||||||||| |||| || || ||
Sbjct: 553 gacatgatcttcaggatgtcaatagcctcggcagtcttcctggatgagatcagaccaagt 494
Query: 61 gagttcacgtcctggttgtgctgctccgcgctctgcacgtggttggtgatggggttgccc 120
|||||||| |||||||||||||||||||||||||| || |||||||| | |||||||||
Sbjct: 493 gagttcacatcctggttgtgctgctccgcgctctggacatggttggtcaccgggttgccc 434
Query: 121 aggtactggagctcggagcagtaggacgccatggcgatctcggtgcccttgaacccgtag 180
| | |||| ||||| |||||||| || |||||||||||||||| ||||||||| || |||
Sbjct: 433 aagaactgcagctcagagcagtatgaggccatggcgatctcggcgcccttgaaaccatag 374
Query: 181 tccaggctcgggttgcggctgccggccaggttggaggtcagcccgttgttgtagaactcg 240
|||| |||||||||||| | |||| ||||||||| | ||| || ||||||||||| |||
Sbjct: 373 tccaagctcgggttgcgcccaccggacaggttggaaggcaggccattgttgtagaagtcg 314
Query: 241 ttgaccagctcggagaactgcgcgaacatgagcttgccgatgttggcgacggcgaggcgg 300
|| || ||||| |||||||| |||||||| |||||||| || || | ||||||||||
Sbjct: 313 ttcacgagctccgagaactgggcgaacatcagcttgccaatagcagcaatggcgaggcgg 254
Query: 301 gcgttgtccatggacacgccgatcggggtgccctggaagttgccgccgtgcagcgccttg 360
| |||||||||||| || ||||| |||||||| ||||||||||| ||||| | ||||||
Sbjct: 253 gtgttgtccatggagacaccgatgggggtgccttggaagttgccaccgtggatagccttg 194
Query: 361 ccgcggaggacgtcgatgaccgggttgtcgttcacggagttg 402
|| ||| ||||||||||| |||||||||||| || ||||||
Sbjct: 193 ccacgggagacgtcgatgagcgggttgtcgttgacagagttg 152
>gb|BI958448.1|BI958448 HVSMEn0015A23f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0015A23f, mRNA sequence
Length = 638
Score = 297 bits (150), Expect = 5e-079
Identities = 339/402 (84%)
Strand = Plus / Minus
Query: 1 gacatgagcttcaggatgtcgatcgcctcggcggtcttcctggccgagacgaggcccagg 60
||||||| |||||||||||| || |||||||| |||||||||| |||| || || ||
Sbjct: 525 gacatgatcttcaggatgtcaatagcctcggcagtcttcctggatgagatcagaccaagt 466
Query: 61 gagttcacgtcctggttgtgctgctccgcgctctgcacgtggttggtgatggggttgccc 120
|||||||| |||||||||||||||||||||||||| || |||||||| | |||||||||
Sbjct: 465 gagttcacatcctggttgtgctgctccgcgctctggacatggttggtcaccgggttgccc 406
Query: 121 aggtactggagctcggagcagtaggacgccatggcgatctcggtgcccttgaacccgtag 180
| | |||| ||||| |||||||| || |||||||||||||||| ||||||||| || |||
Sbjct: 405 aagaactgcagctcagagcagtatgaggccatggcgatctcggcgcccttgaaaccatag 346
Query: 181 tccaggctcgggttgcggctgccggccaggttggaggtcagcccgttgttgtagaactcg 240
|||| |||||||||||| | |||| ||||||||| | ||| || ||||||||||| |||
Sbjct: 345 tccaagctcgggttgcgcccaccggacaggttggaaggcaggccattgttgtagaagtcg 286
Query: 241 ttgaccagctcggagaactgcgcgaacatgagcttgccgatgttggcgacggcgaggcgg 300
|| || ||||| |||||||| |||||||| |||||||| || || | ||||||||||
Sbjct: 285 ttcacgagctccgagaactgggcgaacatcagcttgccaatagcagcaatggcgaggcgg 226
Query: 301 gcgttgtccatggacacgccgatcggggtgccctggaagttgccgccgtgcagcgccttg 360
| |||||||||||| || ||||| |||||||| ||||||||||| ||||| | ||||||
Sbjct: 225 gtgttgtccatggagacaccgatgggggtgccttggaagttgccaccgtggatagccttg 166
Query: 361 ccgcggaggacgtcgatgaccgggttgtcgttcacggagttg 402
|| ||| ||||||||||| |||||||||||| || ||||||
Sbjct: 165 ccacgggagacgtcgatgagcgggttgtcgttgacagagttg 124
>gb|BM372113.2|BM372113 EBro03_SQ004_B02_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ004_B02 5', mRNA sequence
Length = 626
Score = 295 bits (149), Expect = 2e-078
Identities = 338/401 (84%)
Strand = Plus / Minus
Query: 2 acatgagcttcaggatgtcgatcgcctcggcggtcttcctggccgagacgaggcccaggg 61
|||||| |||||||||||| || |||||||| |||||||||| |||| || || || |
Sbjct: 626 acatgatcttcaggatgtcaatagcctcggcagtcttcctggatgagatcagaccaagtg 567
Query: 62 agttcacgtcctggttgtgctgctccgcgctctgcacgtggttggtgatggggttgccca 121
||||||| |||||||||||||||||||||||||| || |||||||| | ||||||||||
Sbjct: 566 agttcacatcctggttgtgctgctccgcgctctggacatggttggtcaccgggttgccca 507
Query: 122 ggtactggagctcggagcagtaggacgccatggcgatctcggtgcccttgaacccgtagt 181
| |||| ||||| |||||||| || |||||||||||||||| ||||||||| || ||||
Sbjct: 506 agaactgcagctcagagcagtatgaggccatggcgatctcggcgcccttgaaaccatagt 447
Query: 182 ccaggctcgggttgcggctgccggccaggttggaggtcagcccgttgttgtagaactcgt 241
||| |||||||||||| | |||| ||||||||| | ||| || ||||||||||| ||||
Sbjct: 446 ccaagctcgggttgcgcccaccggacaggttggaaggcaggccattgttgtagaagtcgt 387
Query: 242 tgaccagctcggagaactgcgcgaacatgagcttgccgatgttggcgacggcgaggcggg 301
| || ||||| |||||||| |||||||| |||||||| || || | |||||||||||
Sbjct: 386 tcacgagctccgagaactgggcgaacatcagcttgccaatagcagcaatggcgaggcggg 327
Query: 302 cgttgtccatggacacgccgatcggggtgccctggaagttgccgccgtgcagcgccttgc 361
|||||||||||| || ||||| |||||||| ||||||||||| ||||| | |||||||
Sbjct: 326 tgttgtccatggagacaccgatgggggtgccttggaagttgccaccgtggatagccttgc 267
Query: 362 cgcggaggacgtcgatgaccgggttgtcgttcacggagttg 402
| ||| ||||||||||| |||||||||||| || ||||||
Sbjct: 266 cacgggagacgtcgatgagcgggttgtcgttgacagagttg 226
>gb|BI958633.1|BI958633 HVSMEn0016A07f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0016A07f, mRNA sequence
Length = 649
Score = 293 bits (148), Expect = 7e-078
Identities = 331/392 (84%)
Strand = Plus / Minus
Query: 1 gacatgagcttcaggatgtcgatcgcctcggcggtcttcctggccgagacgaggcccagg 60
||||||| |||||||||||| || |||||||| |||||||||| |||| || || ||
Sbjct: 393 gacatgatcttcaggatgtcaatagcctcggcagtcttcctggatgagatcagaccaagt 334
Query: 61 gagttcacgtcctggttgtgctgctccgcgctctgcacgtggttggtgatggggttgccc 120
|||||||| |||||||||||||||||||||||||| || |||||||| | |||||||||
Sbjct: 333 gagttcacatcctggttgtgctgctccgcgctctggacatggttggtcaccgggttgccc 274
Query: 121 aggtactggagctcggagcagtaggacgccatggcgatctcggtgcccttgaacccgtag 180
| | |||| ||||| |||||||| || |||||||||||||||| ||||||||| || |||
Sbjct: 273 aagaactgcagctcagagcagtatgaggccatggcgatctcggcgcccttgaaaccatag 214
Query: 181 tccaggctcgggttgcggctgccggccaggttggaggtcagcccgttgttgtagaactcg 240
|||| |||||||||||| | |||| ||||||||| | ||| || ||||||||||| |||
Sbjct: 213 tccaagctcgggttgcgcccaccggacaggttggaaggcaggccattgttgtagaagtcg 154
Query: 241 ttgaccagctcggagaactgcgcgaacatgagcttgccgatgttggcgacggcgaggcgg 300
|| || ||||| |||||||| |||||||| |||||||| || || | ||||||||||
Sbjct: 153 ttcacgagctccgagaactgggcgaacatcagcttgccaatagcagcaatggcgaggcgg 94
Query: 301 gcgttgtccatggacacgccgatcggggtgccctggaagttgccgccgtgcagcgccttg 360
| |||||||||||| || ||||| |||||||| ||||||||||| ||||| | ||||||
Sbjct: 93 gtgttgtccatggagacaccgatgggggtgccttggaagttgccaccgtggatagccttg 34
Query: 361 ccgcggaggacgtcgatgaccgggttgtcgtt 392
|| ||| ||||||||||| ||||||||||||
Sbjct: 33 ccacgggagacgtcgatgagcgggttgtcgtt 2
>gb|BF254075.2|BF254075 HVSMEf0002P06f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0002P06f, mRNA sequence
Length = 865
Score = 281 bits (142), Expect = 3e-074
Identities = 337/402 (83%)
Strand = Plus / Minus
Query: 1 gacatgagcttcaggatgtcgatcgcctcggcggtcttcctggccgagacgaggcccagg 60
||||||| || ||||||||| || |||||||| |||||||||| |||| || || ||
Sbjct: 614 gacatgatctccaggatgtcaatagcctcggcagtcttcctggatgagatcagaccaagt 555
Query: 61 gagttcacgtcctggttgtgctgctccgcgctctgcacgtggttggtgatggggttgccc 120
|||||||| |||||||||||||||||||||||||| || |||||||| | |||||||||
Sbjct: 554 gagttcacatcctggttgtgctgctccgcgctctggacatggttggtcaccgggttgccc 495
Query: 121 aggtactggagctcggagcagtaggacgccatggcgatctcggtgcccttgaacccgtag 180
| | |||| ||||| |||||||| || |||| ||||||||||| ||||||||| || |||
Sbjct: 494 aagaactgcagctcagagcagtatgaggccacggcgatctcggcgcccttgaaaccatag 435
Query: 181 tccaggctcgggttgcggctgccggccaggttggaggtcagcccgttgttgtagaactcg 240
|||| |||||||||||| | |||| ||||||||| | ||| || ||||||||||| |||
Sbjct: 434 tccaagctcgggttgcgcccaccggacaggttggaaggcaggccattgttgtagaagtcg 375
Query: 241 ttgaccagctcggagaactgcgcgaacatgagcttgccgatgttggcgacggcgaggcgg 300
|| || ||||| |||||||| |||||||| |||||||| || || | ||||||||||
Sbjct: 374 ttcacgagctccgagaactgggcgaacatcagcttgccaatagcagcaatggcgaggcgg 315
Query: 301 gcgttgtccatggacacgccgatcggggtgccctggaagttgccgccgtgcagcgccttg 360
| |||||||||||| || ||||| |||||||| ||||||||||| ||||| | ||||||
Sbjct: 314 gtgttgtccatggagacaccgatgggggtgccttggaagttgccaccgtggatagccttg 255
Query: 361 ccgcggaggacgtcgatgaccgggttgtcgttcacggagttg 402
|| ||| ||||||||||| |||||||||||| || ||||||
Sbjct: 254 ccacgggagacgtcgatgagcgggttgtcgttgacagagttg 213
>gb|BI957072.1|BI957072 HVSMEn0007E12f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0007E12f, mRNA sequence
Length = 1174
Score = 281 bits (142), Expect = 3e-074
Identities = 226/254 (88%)
Strand = Plus / Minus
Query: 149 ccatggcgatctcggtgcccttgaacccgtagtccaggctcgggttgcggctgccggcca 208
|||||||||||| || |||||||||||||||||||| ||| ||||||||| ||| ||||
Sbjct: 286 ccatggcgatcttggggcccttgaacccgtagtccaagctggggttgcggtagcctgcca 227
Query: 209 ggttggaggtcagcccgttgttgtagaactcgttgaccagctcggagaactgcgcgaaca 268
|||||||||||||||||||||||||||||| |||||| ||||| ||||||||||||||||
Sbjct: 226 ggttggaggtcagcccgttgttgtagaactagttgacgagctcagagaactgcgcgaaca 167
Query: 269 tgagcttgccgatgttggcgacggcgaggcgggcgttgtccatggacacgccgatcgggg 328
|||||||||| |||||||||| |||||| ||| ||||||||||||||| ||||| || |
Sbjct: 166 tgagcttgccaatgttggcgatggcgagaagggtgttgtccatggacacaccgatgggtg 107
Query: 329 tgccctggaagttgccgccgtgcagcgccttgccgcggaggacgtcgatgaccgggttgt 388
||||||||||||||||||| | || |||||||| ||| ||||||| |||| |||||||
Sbjct: 106 tgccctggaagttgccgccacggagtgccttgccacggtggacgtcaatgagtgggttgt 47
Query: 389 cgttcacggagttg 402
|||| |||||||||
Sbjct: 46 cgttgacggagttg 33
>gb|AV926050.1|AV926050 AV926050 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basdo19 5', mRNA sequence
Length = 622
Score = 280 bits (141), Expect = 1e-073
Identities = 195/213 (91%)
Strand = Plus / Minus
Query: 190 gggttgcggctgccggccaggttggaggtcagcccgttgttgtagaactcgttgaccagc 249
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 614 gggttgcggctgcctgccaggttggaggtcagcccgttgttgtagaactcgttgacgagc 555
Query: 250 tcggagaactgcgcgaacatgagcttgccgatgttggcgacggcgaggcgggcgttgtcc 309
|| |||||||||||||||||||||||||| |||||||||| |||||| |||| |||||||
Sbjct: 554 tccgagaactgcgcgaacatgagcttgccaatgttggcgatggcgagacgggtgttgtcc 495
Query: 310 atggacacgccgatcggggtgccctggaagttgccgccgtgcagcgccttgccgcggagg 369
|||||||| ||||| || |||||||||||||||||||| || || |||||||| ||| ||
Sbjct: 494 atggacacaccgatgggtgtgccctggaagttgccgccatggagtgccttgccacggtgg 435
Query: 370 acgtcgatgaccgggttgtcgttcacggagttg 402
||||| ||||| ||||||||||| |||||||||
Sbjct: 434 acgtcaatgactgggttgtcgttgacggagttg 402
>gb|BI959804.1|BI959804 HVSMEn0021K01f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0021K01f, mRNA sequence
Length = 627
Score = 276 bits (139), Expect = 2e-072
Identities = 319/379 (84%)
Strand = Plus / Minus
Query: 1 gacatgagcttcaggatgtcgatcgcctcggcggtcttcctggccgagacgaggcccagg 60
||||||| |||||||||||| || |||||||| |||||||||| |||| || || ||
Sbjct: 382 gacatgatcttcaggatgtcaatagcctcggcagtcttcctggatgagatcagaccaagt 323
Query: 61 gagttcacgtcctggttgtgctgctccgcgctctgcacgtggttggtgatggggttgccc 120
|||||||| |||||||||||||||||||||||||| || |||||||| | |||||||||
Sbjct: 322 gagttcacatcctggttgtgctgctccgcgctctggacatggttggtcaccgggttgccc 263
Query: 121 aggtactggagctcggagcagtaggacgccatggcgatctcggtgcccttgaacccgtag 180
| | |||| ||||| |||||||| || |||||||||||||||| ||||||||| || |||
Sbjct: 262 aagaactgcagctcagagcagtatgaggccatggcgatctcggcgcccttgaaaccatag 203
Query: 181 tccaggctcgggttgcggctgccggccaggttggaggtcagcccgttgttgtagaactcg 240
|||| |||||||||||| | |||| ||||||||| | ||| || ||||||||||| |||
Sbjct: 202 tccaagctcgggttgcgcccaccggacaggttggaaggcaggccattgttgtagaagtcg 143
Query: 241 ttgaccagctcggagaactgcgcgaacatgagcttgccgatgttggcgacggcgaggcgg 300
|| || ||||| |||||||| |||||||| |||||||| || || | ||||||||||
Sbjct: 142 ttcacgagctccgagaactgggcgaacatcagcttgccaatagcagcaatggcgaggcgg 83
Query: 301 gcgttgtccatggacacgccgatcggggtgccctggaagttgccgccgtgcagcgccttg 360
| |||||||||||| || ||||| |||||||| ||||||||||| ||||| | ||||||
Sbjct: 82 gtgttgtccatggagacaccgatgggggtgccttggaagttgccaccgtggatagccttg 23
Query: 361 ccgcggaggacgtcgatga 379
|| ||| |||||||||||
Sbjct: 22 ccacgggagacgtcgatga 4
>gb|BG369913.2|BG369913 HVSMEi0026I13f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0026I13f, mRNA sequence
Length = 492
Score = 276 bits (139), Expect = 2e-072
Identities = 319/379 (84%)
Strand = Plus / Minus
Query: 1 gacatgagcttcaggatgtcgatcgcctcggcggtcttcctggccgagacgaggcccagg 60
||||||| |||||||||||| || |||||||| |||||||||| |||| || || ||
Sbjct: 381 gacatgatcttcaggatgtcaatagcctcggcagtcttcctggatgagatcagaccaagt 322
Query: 61 gagttcacgtcctggttgtgctgctccgcgctctgcacgtggttggtgatggggttgccc 120
|||||||| |||||||||||||||||||||||||| || |||||||| | |||||||||
Sbjct: 321 gagttcacatcctggttgtgctgctccgcgctctggacatggttggtcaccgggttgccc 262
Query: 121 aggtactggagctcggagcagtaggacgccatggcgatctcggtgcccttgaacccgtag 180
| | |||| ||||| |||||||| || |||||||||||||||| ||||||||| || |||
Sbjct: 261 aagaactgcagctcagagcagtatgaggccatggcgatctcggcgcccttgaaaccatag 202
Query: 181 tccaggctcgggttgcggctgccggccaggttggaggtcagcccgttgttgtagaactcg 240
|||| |||||||||||| | |||| ||||||||| | ||| || ||||||||||| |||
Sbjct: 201 tccaagctcgggttgcgcccaccggacaggttggaaggcaggccattgttgtagaagtcg 142
Query: 241 ttgaccagctcggagaactgcgcgaacatgagcttgccgatgttggcgacggcgaggcgg 300
|| || ||||| |||||||| |||||||| |||||||| || || | ||||||||||
Sbjct: 141 ttcacgagctccgagaactgggcgaacatcagcttgccaatagcagcaatggcgaggcgg 82
Query: 301 gcgttgtccatggacacgccgatcggggtgccctggaagttgccgccgtgcagcgccttg 360
| |||||||||||| || ||||| |||||||| ||||||||||| ||||| | ||||||
Sbjct: 81 gtgttgtccatggagacaccgatgggggtgccttggaagttgccaccgtggatagccttg 22
Query: 361 ccgcggaggacgtcgatga 379
|| ||| |||||||||||
Sbjct: 21 ccacgggagacgtcgatga 3
>gb|BU983875.1|BU983875 HA31E23r HA Hordeum vulgare subsp. vulgare cDNA clone HA31E23
5-PRIME, mRNA sequence
Length = 503
Score = 274 bits (138), Expect = 7e-072
Identities = 337/402 (83%), Gaps = 1/402 (0%)
Strand = Plus / Minus
Query: 1 gacatgagcttcaggatgtcgatcgcctcggcggtcttcctggccgagacgaggcccagg 60
||||||| |||||||||||| || |||||||| |||||||||| |||| || || ||
Sbjct: 468 gacatgatcttcaggatgtcaatagcctcggcagtcttcctggatgagatcagaccaagt 409
Query: 61 gagttcacgtcctggttgtgctgctccgcgctctgcacgtggttggtgatggggttgccc 120
|||||||| |||||||||||||||||||||||||| || |||||||| |||||||||
Sbjct: 408 gagttcacatcctggttgtgctgctccgcgctctggacatggttggtctccgggttgccc 349
Query: 121 aggtactggagctcggagcagtaggacgccatggcgatctcggtgcccttgaacccgtag 180
| | |||| ||||| |||||||| || |||||||||||||||| ||||||||| || |||
Sbjct: 348 aagaactgcagctcagagcagtatgaggccatggcgatctcggcgcccttgaaaccatag 289
Query: 181 tccaggctcgggttgcggctgccggccaggttggaggtcagcccgttgttgtagaactcg 240
|||| |||||||||||| | |||| ||||||||| | || || ||||||||||| |||
Sbjct: 288 tccaagctcgggttgcgcccaccggacaggttggaag-gaggccattgttgtagaagtcg 230
Query: 241 ttgaccagctcggagaactgcgcgaacatgagcttgccgatgttggcgacggcgaggcgg 300
|| || ||||| |||||||| |||||||| |||||||| || || | ||||||||||
Sbjct: 229 ttcacgagctccgagaactgggcgaacatcagcttgccaatagcagcaatggcgaggcgg 170
Query: 301 gcgttgtccatggacacgccgatcggggtgccctggaagttgccgccgtgcagcgccttg 360
| |||||||||||| || ||||| |||||||| ||||||||||| ||||| | ||||||
Sbjct: 169 gtgttgtccatggagacaccgatgggggtgccttggaagttgccaccgtggatagccttg 110
Query: 361 ccgcggaggacgtcgatgaccgggttgtcgttcacggagttg 402
|| ||| ||||||||||| |||||||||||| || ||||||
Sbjct: 109 ccacgggagacgtcgatgagcgggttgtcgttgacagagttg 68
>gb|BU996801.1|BU996801 HM14M22r HM Hordeum vulgare subsp. vulgare cDNA clone HM14M22
5-PRIME, mRNA sequence
Length = 626
Score = 268 bits (135), Expect = 4e-070
Identities = 319/379 (84%), Gaps = 1/379 (0%)
Strand = Plus / Minus
Query: 1 gacatgagcttcaggatgtcgatcgcctcggcggtcttcctggccgagacgaggcccagg 60
||||||| |||||||||||| || |||||||| |||||||||| |||| || || ||
Sbjct: 391 gacatgatcttcaggatgtcaatagcctcggcagtcttcctggatgagatcagaccaagt 332
Query: 61 gagttcacgtcctggttgtgctgctccgcgctctgcacgtggttggtgatggggttgccc 120
|||||||| |||||||||||||||||||||||||| || |||||||| | |||||||||
Sbjct: 331 gagttcacatcctggttgtgctgctccgcgctctggacatggttggtcaccgggttgccc 272
Query: 121 aggtactggagctcggagcagtaggacgccatggcgatctcggtgcccttgaacccgtag 180
| | |||| ||||| |||||||| || |||||||||||||||| ||||||||| || |||
Sbjct: 271 aagaactgcagctcagagcagtatgaggccatggcgatctcggcgcccttgaaaccatag 212
Query: 181 tccaggctcgggttgcggctgccggccaggttggaggtcagcccgttgttgtagaactcg 240
|||| |||||||||||| | |||| ||||||||| | ||| || ||||||||||| |||
Sbjct: 211 tccaagctcgggttgcgcccaccggacaggttggaaggcaggccattgttgtagaagtcg 152
Query: 241 ttgaccagctcggagaactgcgcgaacatgagcttgccgatgttggcgacggcgaggcgg 300
|| || ||||| |||||||| |||||||| |||||||| || || | ||||||||||
Sbjct: 151 ttcacgagctccgagaactgggcgaacatcagcttgccaatagcagcaatggcgaggcgg 92
Query: 301 gcgttgtccatggacacgccgatcggggtgccctggaagttgccgccgtgcagcgccttg 360
| |||||||||||| || ||||| |||||| ||||||||||||| ||||| | ||||||
Sbjct: 91 gtgttgtccatggagacaccgatgggggtg-cctggaagttgccaccgtggatagccttg 33
Query: 361 ccgcggaggacgtcgatga 379
|| ||| |||||||||||
Sbjct: 32 ccacgggagacgtcgatga 14
>gb|BI958878.1|BI958878 HVSMEn0016P19f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0016P19f, mRNA sequence
Length = 655
Score = 266 bits (134), Expect = 2e-069
Identities = 290/342 (84%)
Strand = Plus / Minus
Query: 61 gagttcacgtcctggttgtgctgctccgcgctctgcacgtggttggtgatggggttgccc 120
|||||||| |||||||||||||||||||||||||| || |||||||| | |||||||||
Sbjct: 655 gagttcacatcctggttgtgctgctccgcgctctggacatggttggtcaccgggttgccc 596
Query: 121 aggtactggagctcggagcagtaggacgccatggcgatctcggtgcccttgaacccgtag 180
| | |||| ||||| |||||||| || |||||||||||||||| ||||||||| || |||
Sbjct: 595 aagaactgcagctcagagcagtatgaggccatggcgatctcggcgcccttgaaaccatag 536
Query: 181 tccaggctcgggttgcggctgccggccaggttggaggtcagcccgttgttgtagaactcg 240
|||| |||||||||||| | |||| ||||||||| | ||| || ||||||||||| |||
Sbjct: 535 tccaagctcgggttgcgcccaccggacaggttggaaggcaggccattgttgtagaagtcg 476
Query: 241 ttgaccagctcggagaactgcgcgaacatgagcttgccgatgttggcgacggcgaggcgg 300
|| || ||||| |||||||| |||||||| |||||||| || || | ||||||||||
Sbjct: 475 ttcacgagctccgagaactgggcgaacatcagcttgccaatagcagcaatggcgaggcgg 416
Query: 301 gcgttgtccatggacacgccgatcggggtgccctggaagttgccgccgtgcagcgccttg 360
| |||||||||||| || ||||| |||||||| ||||||||||| ||||| | ||||||
Sbjct: 415 gtgttgtccatggagacaccgatgggggtgccttggaagttgccaccgtggatagccttg 356
Query: 361 ccgcggaggacgtcgatgaccgggttgtcgttcacggagttg 402
|| ||| ||||||||||| |||||||||||| || ||||||
Sbjct: 355 ccacgggagacgtcgatgagcgggttgtcgttgacagagttg 314
>gb|BU980765.1|BU980765 HA21K02r HA Hordeum vulgare subsp. vulgare cDNA clone HA21K02
5-PRIME, mRNA sequence
Length = 442
Score = 266 bits (134), Expect = 2e-069
Identities = 290/342 (84%)
Strand = Plus / Minus
Query: 61 gagttcacgtcctggttgtgctgctccgcgctctgcacgtggttggtgatggggttgccc 120
|||||||| |||||||||||||||||||||||||| || |||||||| | |||||||||
Sbjct: 427 gagttcacatcctggttgtgctgctccgcgctctggacatggttggtcaccgggttgccc 368
Query: 121 aggtactggagctcggagcagtaggacgccatggcgatctcggtgcccttgaacccgtag 180
| | |||| ||||| |||||||| || |||||||||||||||| ||||||||| || |||
Sbjct: 367 aagaactgcagctcagagcagtatgaggccatggcgatctcggcgcccttgaaaccatag 308
Query: 181 tccaggctcgggttgcggctgccggccaggttggaggtcagcccgttgttgtagaactcg 240
|||| |||||||||||| | |||| ||||||||| | ||| || ||||||||||| |||
Sbjct: 307 tccaagctcgggttgcgcccaccggacaggttggaaggcaggccattgttgtagaagtcg 248
Query: 241 ttgaccagctcggagaactgcgcgaacatgagcttgccgatgttggcgacggcgaggcgg 300
|| || ||||| |||||||| |||||||| |||||||| || || | ||||||||||
Sbjct: 247 ttcacgagctccgagaactgggcgaacatcagcttgccaatagcagcaatggcgaggcgg 188
Query: 301 gcgttgtccatggacacgccgatcggggtgccctggaagttgccgccgtgcagcgccttg 360
| |||||||||||| || ||||| |||||||| ||||||||||| ||||| | ||||||
Sbjct: 187 gtgttgtccatggagacaccgatgggggtgccttggaagttgccaccgtggatagccttg 128
Query: 361 ccgcggaggacgtcgatgaccgggttgtcgttcacggagttg 402
|| ||| ||||||||||| |||||||||||| || ||||||
Sbjct: 127 ccacgggagacgtcgatgagcgggttgtcgttgacagagttg 86
>gb|AV926974.1|AV926974 AV926974 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd26e13 5', mRNA sequence
Length = 556
Score = 264 bits (133), Expect = 6e-069
Identities = 190/209 (90%)
Strand = Plus / Minus
Query: 1 gacatgagcttcaggatgtcgatcgcctcggcggtcttcctggccgagacgaggcccagg 60
|||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||
Sbjct: 210 gacatgagcttcaggatgtccacagcctcggcggtcttcctggccgagacgaggccgaga 151
Query: 61 gagttcacgtcctggttgtgctgctccgcgctctgcacgtggttggtgatggggttgccc 120
||||||||||||||||||||||||||||| ||||| || |||||||| | |||||| |
Sbjct: 150 gagttcacgtcctggttgtgctgctccgcactctggacatggttggtcaccgggttggca 91
Query: 121 aggtactggagctcggagcagtaggacgccatggcgatctcggtgcccttgaacccgtag 180
|||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 90 aggtactggagctcagagcagtaggaagccatggcgatctcggtgcccttgaagccgtag 31
Query: 181 tccaggctcgggttgcggctgccggccag 209
|||| ||| |||||||||||||| |||||
Sbjct: 30 tccaagctggggttgcggctgcctgccag 2
>gb|BI960030.1|BI960030 HVSMEn0022P01f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0022P01f, mRNA sequence
Length = 628
Score = 260 bits (131), Expect = 1e-067
Identities = 185/203 (91%)
Strand = Plus / Minus
Query: 1 gacatgagcttcaggatgtcgatcgcctcggcggtcttcctggccgagacgaggcccagg 60
|||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||
Sbjct: 206 gacatgagcttcaggatgtccacagcctcggcggtcttcctggccgagacgaggccgaga 147
Query: 61 gagttcacgtcctggttgtgctgctccgcgctctgcacgtggttggtgatggggttgccc 120
||||||||||||||||||||||||||||| ||||| || |||||||| | |||||| |
Sbjct: 146 gagttcacgtcctggttgtgctgctccgcactctggacatggttggtcaccgggttggca 87
Query: 121 aggtactggagctcggagcagtaggacgccatggcgatctcggtgcccttgaacccgtag 180
|||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 86 aggtactggagctcagagcagtaggaagccatggcgatctcggtgcccttgaagccgtag 27
Query: 181 tccaggctcgggttgcggctgcc 203
|||| ||| ||||||||||||||
Sbjct: 26 tccaagctggggttgcggctgcc 4
>gb|BF259309.2|BF259309 HVSMEf0018P05f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0018P05f, mRNA sequence
Length = 862
Score = 250 bits (126), Expect = 1e-064
Identities = 315/378 (83%)
Strand = Plus / Minus
Query: 25 gcctcggcggtcttcctggccgagacgaggcccagggagttcacgtcctggttgtgctgc 84
|||||||| |||||||||| |||| || || || |||||||| |||||||||||||||
Sbjct: 590 gcctcggcagtcttcctggatgagatcagaccaagtgagttcacatcctggttgtgctgc 531
Query: 85 tccgcgctctgcacgtggttggtgatggggttgcccaggtactggagctcggagcagtag 144
||||||||||| || |||||||| | |||||||||| | |||| ||||| ||||||||
Sbjct: 530 tccgcgctctgtacatggttggtcaccgggttgcccaagaactgcagctcagagcagtat 471
Query: 145 gacgccatggcgatctcggtgcccttgaacccgtagtccaggctcgggttgcggctgccg 204
|| |||| ||||||||||| |||||| || || ||||||| |||||||||||| | |||
Sbjct: 470 gaggccacggcgatctcggcgcccttcaaaccatagtccaagctcgggttgcgcccaccg 411
Query: 205 gccaggttggaggtcagcccgttgttgtagaactcgttgaccagctcggagaactgcgcg 264
| ||||||| | | ||| || ||||||||||| ||||| || ||||| |||||||| |||
Sbjct: 410 gacaggttgcaaggcaggccattgttgtagaagtcgttcacgagctccgagaactgggcg 351
Query: 265 aacatgagcttgccgatgttggcgacggcgaggcgggcgttgtccatggacacgccgatc 324
||||| |||||||| || || | ||||||||||| |||||||||||| || |||||
Sbjct: 350 aacatcagcttgccaatagcagcaatggcgaggcgggtgttgtccatggagacaccgatg 291
Query: 325 ggggtgccctggaagttgccgccgtgcagcgccttgccgcggaggacgtcgatgaccggg 384
|||||||| ||||||||||| ||||| | |||||||| ||| ||||||||||| ||||
Sbjct: 290 ggggtgccttggaagttgccaccgtggatagccttgccacgggagacgtcgatgagcggg 231
Query: 385 ttgtcgttcacggagttg 402
|||||||| || ||||||
Sbjct: 230 ttgtcgttgacagagttg 213
>gb|BM442994.2|BM442994 EBro02_SQ002_C04_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ002_C04 5', mRNA sequence
Length = 406
Score = 246 bits (124), Expect = 1e-063
Identities = 280/332 (84%)
Strand = Plus / Minus
Query: 1 gacatgagcttcaggatgtcgatcgcctcggcggtcttcctggccgagacgaggcccagg 60
||||||| |||||||||||| || |||||||| |||||||||| |||| || || ||
Sbjct: 332 gacatgatcttcaggatgtcaatagcctcggcagtcttcctggatgagatcagaccaagt 273
Query: 61 gagttcacgtcctggttgtgctgctccgcgctctgcacgtggttggtgatggggttgccc 120
|||||||| |||||||||||||||||||||||||| || |||||||| | |||||||||
Sbjct: 272 gagttcacatcctggttgtgctgctccgcgctctggacatggttggtcaccgggttgccc 213
Query: 121 aggtactggagctcggagcagtaggacgccatggcgatctcggtgcccttgaacccgtag 180
| | |||| ||||| |||||||| || |||||||||||||||| ||||||||| || |||
Sbjct: 212 aagaactgcagctcagagcagtatgaggccatggcgatctcggcgcccttgaaaccatag 153
Query: 181 tccaggctcgggttgcggctgccggccaggttggaggtcagcccgttgttgtagaactcg 240
|||| |||||||||||| | |||| ||||||||| | ||| || ||||||||||| |||
Sbjct: 152 tccaagctcgggttgcgcccaccggacaggttggaaggcaggccattgttgtagaagtcg 93
Query: 241 ttgaccagctcggagaactgcgcgaacatgagcttgccgatgttggcgacggcgaggcgg 300
|| || ||||| |||||||| |||||||| |||||||| || || | ||||||||||
Sbjct: 92 ttcacgagctccgagaactgggcgaacatcagcttgccaatagcagcaatggcgaggcgg 33
Query: 301 gcgttgtccatggacacgccgatcggggtgcc 332
| |||||||||||| || ||||| ||||||||
Sbjct: 32 gtgttgtccatggagacaccgatgggggtgcc 1
>gb|BE215152.2|BE215152 HV_CEb0006A03f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0006A03f, mRNA sequence
Length = 663
Score = 238 bits (120), Expect = 4e-061
Identities = 276/328 (84%)
Strand = Plus / Minus
Query: 75 gttgtgctgctccgcgctctgcacgtggttggtgatggggttgcccaggtactggagctc 134
|||||| |||||||||||||| || |||||||| ||||||||||| | |||| |||||
Sbjct: 663 gttgtgttgctccgcgctctgaacatggttggtcccggggttgcccaagaactgcagctc 604
Query: 135 ggagcagtaggacgccatggcgatctcggtgcccttgaacccgtagtccaggctcgggtt 194
|||||||| || |||||||||||||||| ||||||||| || ||||||| |||||||||
Sbjct: 603 agagcagtatgaggccatggcgatctcggcgcccttgaaaccatagtccaagctcgggtt 544
Query: 195 gcggctgccggccaggttggaggtcagcccgttgttgtagaactcgttgaccagctcgga 254
||| | |||| ||||||||| | ||| || ||||||||||| ||||| || ||||| ||
Sbjct: 543 gcgcccaccggacaggttggaaggcaggccattgttgtagaagtcgttcacgagctccga 484
Query: 255 gaactgcgcgaacatgagcttgccgatgttggcgacggcgaggcgggcgttgtccatgga 314
|||||| |||||||| |||||||| || || | ||||||||||| ||||||||||||
Sbjct: 483 gaactgggcgaacatcagcttgccaatagcagcaatggcgaggcgggtgttgtccatgga 424
Query: 315 cacgccgatcggggtgccctggaagttgccgccgtgcagcgccttgccgcggaggacgtc 374
|| ||||| |||||||| ||||||||||| ||||| | |||||||| ||| ||||||
Sbjct: 423 gacaccgatgggggtgccttggaagttgccaccgtggatagccttgccacgggagacgtc 364
Query: 375 gatgaccgggttgtcgttcacggagttg 402
||||| |||||||||||| || ||||||
Sbjct: 363 gatgagcgggttgtcgttgacagagttg 336
>gb|BM372206.2|BM372206 EBro03_SQ004_F04_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ004_F04 5', mRNA sequence
Length = 477
Score = 238 bits (120), Expect = 4e-061
Identities = 168/184 (91%)
Strand = Plus / Minus
Query: 1 gacatgagcttcaggatgtcgatcgcctcggcggtcttcctggccgagacgaggcccagg 60
|||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||
Sbjct: 184 gacatgagcttcaggatgtccacagcctcggcggtcttcctggccgagacgaggccgaga 125
Query: 61 gagttcacgtcctggttgtgctgctccgcgctctgcacgtggttggtgatggggttgccc 120
||||||||||||||||||||||||||||| ||||| || |||||||| | |||||| |
Sbjct: 124 gagttcacgtcctggttgtgctgctccgcactctggacatggttggtcaccgggttggca 65
Query: 121 aggtactggagctcggagcagtaggacgccatggcgatctcggtgcccttgaacccgtag 180
|||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 64 aggtactggagctcagagcagtaggaagccatggcgatctcggtgcccttgaagccgtag 5
Query: 181 tcca 184
||||
Sbjct: 4 tcca 1
>gb|BI959619.1|BI959619 HVSMEn0020H03f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0020H03f, mRNA sequence
Length = 616
Score = 226 bits (114), Expect = 1e-057
Identities = 178/198 (89%), Gaps = 1/198 (0%)
Strand = Plus / Minus
Query: 1 gacatgagcttcaggatgtcgatcgcctcggcggtcttcctggccgagacgaggcccagg 60
|||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||
Sbjct: 197 gacatgagcttcaggatgtccacagcctcggcggtcttcctggccgagacgaggccgaga 138
Query: 61 gagttcacgtcctggttgtgctgctccgcgctctgcacgtggttggtgatggggttgccc 120
||||||||||||||||||||||||||||| ||||| || |||||||| | |||||| |
Sbjct: 137 gagttcacgtcctggttgtgctgctccgcactctggacatggttggtcaccgggttggca 78
Query: 121 aggtactggagctcggagcagtaggacgccatggcgatctcggtgcccttgaacccgtag 180
|||||||||||||| ||||||||||| |||||||||||||||||| ||||||| ||||||
Sbjct: 77 aggtactggagctcagagcagtaggaagccatggcgatctcggtg-ccttgaagccgtag 19
Query: 181 tccaggctcgggttgcgg 198
||| ||| |||||||||
Sbjct: 18 tcccagctggggttgcgg 1
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 155,369
Number of Sequences: 312970
Number of extensions: 155369
Number of successful extensions: 41895
Number of sequences better than 0.5: 324
Number of HSP's better than 0.5 without gapping: 323
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 41093
Number of HSP's gapped (non-prelim): 780
length of query: 1252
length of database: 175,134,539
effective HSP length: 19
effective length of query: 1233
effective length of database: 169,188,109
effective search space: 208608938397
effective search space used: 208608938397
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)