BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.8
(708 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BI947685.1|BI947685 HVSMEl0006H01f Hordeum vulgare spike... 151 4e-035
gb|BI779089.2|BI779089 EBro01_SQ002_O18_R root, 3 week, hyd... 151 4e-035
gb|AL450589.1|AL450589 AL450589 Hordeum vulgare Barke etiol... 143 9e-033
gb|AL503351.1|AL503351 AL503351 Hordeum vulgare Barke roots... 143 9e-033
gb|AL503714.1|AL503714 AL503714 Hordeum vulgare Barke roots... 143 9e-033
gb|AL505427.1|AL505427 AL505427 Hordeum vulgare Barke roots... 143 9e-033
gb|AL507408.1|AL507408 AL507408 Hordeum vulgare Barke devel... 143 9e-033
gb|AL510613.1|AL510613 AL510613 Hordeum vulgare Barke devel... 143 9e-033
gb|AL511285.1|AL511285 AL511285 Hordeum vulgare Barke devel... 143 9e-033
gb|BF625390.2|BF625390 HVSMEa0008M17f Hordeum vulgare seedl... 143 9e-033
gb|BF267079.2|BF267079 HV_CEa0016O05f Hordeum vulgare seedl... 143 9e-033
gb|BG343463.2|BG343463 HVSMEg0005N08f Hordeum vulgare pre-a... 143 9e-033
gb|BE454194.3|BE454194 HVSMEh0093D11f Hordeum vulgare 5-45 ... 143 9e-033
gb|BG417020.2|BG417020 HVSMEk0015L16f Hordeum vulgare testa... 143 9e-033
gb|BF261440.3|BF261440 HV_CEa0001E16f Hordeum vulgare seedl... 143 9e-033
gb|BE214876.3|BE214876 HV_CEb0004P14f Hordeum vulgare seedl... 143 9e-033
gb|AV908970.1|AV908970 AV908970 K. Sato unpublished cDNA li... 143 9e-033
gb|AV911940.1|AV911940 AV911940 K. Sato unpublished cDNA li... 143 9e-033
gb|AV921734.1|AV921734 AV921734 K. Sato unpublished cDNA li... 143 9e-033
gb|AV921751.1|AV921751 AV921751 K. Sato unpublished cDNA li... 143 9e-033
gb|AV923307.1|AV923307 AV923307 K. Sato unpublished cDNA li... 143 9e-033
gb|AV924567.1|AV924567 AV924567 K. Sato unpublished cDNA li... 143 9e-033
gb|AV924568.1|AV924568 AV924568 K. Sato unpublished cDNA li... 143 9e-033
gb|AV927475.1|AV927475 AV927475 K. Sato unpublished cDNA li... 143 9e-033
gb|AV928485.1|AV928485 AV928485 K. Sato unpublished cDNA li... 143 9e-033
gb|AV929664.1|AV929664 AV929664 K. Sato unpublished cDNA li... 143 9e-033
gb|AV929665.1|AV929665 AV929665 K. Sato unpublished cDNA li... 143 9e-033
gb|AV929683.1|AV929683 AV929683 K. Sato unpublished cDNA li... 143 9e-033
gb|AV929690.1|AV929690 AV929690 K. Sato unpublished cDNA li... 143 9e-033
gb|BM816164.1|BM816164 HC107E09_SK.ab1 HC Hordeum vulgare s... 143 9e-033
gb|BM816258.1|BM816258 HB106E10_SK.ab1 HB Hordeum vulgare s... 143 9e-033
gb|BM816259.1|BM816259 HC110D12_T3.ab1 HC Hordeum vulgare s... 143 9e-033
gb|BM817391.1|BM817391 HC111G03_T3.ab1 HC Hordeum vulgare s... 143 9e-033
gb|AJ462504.1|AJ462504 AJ462504 S00002 Hordeum vulgare subs... 143 9e-033
gb|AJ462505.1|AJ462505 AJ462505 S00002 Hordeum vulgare subs... 143 9e-033
gb|AJ462506.1|AJ462506 AJ462506 S00002 Hordeum vulgare subs... 143 9e-033
gb|BQ458766.1|BQ458766 HA04E18r HA Hordeum vulgare subsp. v... 143 9e-033
gb|BQ459973.1|BQ459973 HA07J01r HA Hordeum vulgare subsp. v... 143 9e-033
gb|BQ460828.1|BQ460828 HA05M18r HA Hordeum vulgare subsp. v... 143 9e-033
gb|BQ463755.1|BQ463755 HG01F11r HG Hordeum vulgare subsp. v... 143 9e-033
gb|BQ464468.1|BQ464468 HF02F23r HF Hordeum vulgare subsp. v... 143 9e-033
gb|BQ467331.1|BQ467331 HS03G21r HS Hordeum vulgare subsp. v... 143 9e-033
gb|BQ469224.1|BQ469224 HM03M08r HM Hordeum vulgare subsp. v... 143 9e-033
gb|BQ469662.1|BQ469662 HZ01H20r HZ Hordeum vulgare subsp. v... 143 9e-033
gb|BQ661491.1|BQ661491 HM03M08u HM Hordeum vulgare subsp. v... 143 9e-033
gb|BM375459.2|BM375459 EBem06_SQ003_G17_R embryo, 21 DPA, n... 143 9e-033
gb|BI780668.2|BI780668 EBes01_SQ001_L08_R embryo sac, 4-6 D... 143 9e-033
gb|BM099747.2|BM099747 EBes01_SQ004_C16_R embryo sac, 4-6 D... 143 9e-033
gb|BM099768.2|BM099768 EBes01_SQ004_D14_R embryo sac, 4-6 D... 143 9e-033
gb|BI781188.2|BI781188 EBma03_SQ001_L10_R maternal, 8 DPA, ... 143 9e-033
gb|BM373095.2|BM373095 EBma04_SQ003_B07_R maternal, 10 DPA,... 143 9e-033
gb|BM373452.2|BM373452 EBma04_SQ004_H21_R maternal, 10 DPA,... 143 9e-033
gb|BI780938.2|BI780938 EBma05_SQ001_J06_R maternal, 12 DPA,... 143 9e-033
gb|BM096848.2|BM096848 EBma07_SQ001_O04_R maternal, 21 DPA,... 143 9e-033
gb|BM096785.2|BM096785 EBma07_SQ001_K07_R maternal, 21 DPA,... 143 9e-033
gb|BM371901.2|BM371901 EBma08_SQ004_G03_R maternal, 28 DPA,... 143 9e-033
gb|BM097918.2|BM097918 EBpi03_SQ002_A18_R pistil, 4 DPA, no... 143 9e-033
gb|BM098106.2|BM098106 EBpi03_SQ002_J03_R pistil, 4 DPA, no... 143 9e-033
gb|BM098229.2|BM098229 EBpi03_SQ002_O15_R pistil, 4 DPA, no... 143 9e-033
gb|BM443018.2|BM443018 EBro02_SQ002_D08_R root, 3 week, hyd... 143 9e-033
gb|BQ755351.1|BQ755351 EBed07_SQ002_J12_R endosperm, 28 DPA... 143 9e-033
gb|BQ758239.1|BQ758239 EBma03_SQ001_G18_R maternal, 8 DPA, ... 143 9e-033
gb|BQ759939.1|BQ759939 EBpi05_SQ004_M20_R pistil, 8 DPA, no... 143 9e-033
gb|BQ763124.1|BQ763124 EBro02_SQ007_E09_R root, 3 week, hyd... 143 9e-033
gb|BQ764164.1|BQ764164 EBan01_SQ005_E04 _R anther, yellow s... 143 9e-033
gb|BQ764498.1|BQ764498 EBca01_SQ004_E05_R carpel, pre-anthe... 143 9e-033
gb|BQ764507.1|BQ764507 EBca01_SQ004_G03_R carpel, pre-anthe... 143 9e-033
gb|BQ764563.1|BQ764563 EBca01_SQ004_B09_R carpel, pre-anthe... 143 9e-033
gb|BQ764891.1|BQ764891 EBca01_SQ005_N05_R carpel, pre-anthe... 143 9e-033
gb|BQ766378.1|BQ766378 EBro08_SQ005_G20_R root, 3 week, dro... 143 9e-033
gb|BQ766679.1|BQ766679 EBro08_SQ006_G20_R root, 3 week, dro... 143 9e-033
gb|BQ766807.1|BQ766807 EBro08_SQ007_M04_R root, 3 week, dro... 143 9e-033
gb|BU972492.1|BU972492 HB21M18r BC Hordeum vulgare subsp. v... 143 9e-033
gb|BU974564.1|BU974564 HB28F14r BC Hordeum vulgare subsp. v... 143 9e-033
gb|BU976292.1|BU976292 HA03H13r HA Hordeum vulgare subsp. v... 143 9e-033
gb|BU977132.1|BU977132 HA10O07r HA Hordeum vulgare subsp. v... 143 9e-033
gb|BU977133.1|BU977133 HA10O07u HA Hordeum vulgare subsp. v... 143 9e-033
gb|BU978911.1|BU978911 HA14J22r HA Hordeum vulgare subsp. v... 143 9e-033
gb|BU982085.1|BU982085 HA25H17r HA Hordeum vulgare subsp. v... 143 9e-033
gb|BU982803.1|BU982803 HA27K14r HA Hordeum vulgare subsp. v... 143 9e-033
gb|BU986583.1|BU986583 HF12E22r HF Hordeum vulgare subsp. v... 143 9e-033
gb|BU986770.1|BU986770 HF12N15r HF Hordeum vulgare subsp. v... 143 9e-033
gb|BU987816.1|BU987816 HF15N13r HF Hordeum vulgare subsp. v... 143 9e-033
gb|BU987968.1|BU987968 HF16E18r HF Hordeum vulgare subsp. v... 143 9e-033
gb|BU989045.1|BU989045 HF19J13r HF Hordeum vulgare subsp. v... 143 9e-033
gb|BU994476.1|BU994476 HM07D06r HM Hordeum vulgare subsp. v... 143 9e-033
gb|BU998080.1|BU998080 HI09P01r HI Hordeum vulgare subsp. v... 143 9e-033
gb|CA003819.1|CA003819 HS15K18r HS Hordeum vulgare subsp. v... 143 9e-033
gb|CA008240.1|CA008240 HU10F12r HU Hordeum vulgare subsp. v... 143 9e-033
gb|CA020872.1|CA020872 HZ38C19r HZ Hordeum vulgare subsp. v... 143 9e-033
gb|CA022553.1|CA022553 HZ43J19r HZ Hordeum vulgare subsp. v... 143 9e-033
gb|CA024364.1|CA024364 HZ49B16r HZ Hordeum vulgare subsp. v... 143 9e-033
gb|CA026043.1|CA026043 HZ53O20r HZ Hordeum vulgare subsp. v... 143 9e-033
gb|CA027207.1|CA027207 HZ58D07r HZ Hordeum vulgare subsp. v... 143 9e-033
gb|CA027272.1|CA027272 HZ58G10r HZ Hordeum vulgare subsp. v... 143 9e-033
gb|CA029023.1|CA029023 HZ63P13r HZ Hordeum vulgare subsp. v... 143 9e-033
gb|CA029067.1|CA029067 HZ64B19r HZ Hordeum vulgare subsp. v... 143 9e-033
gb|CA029563.1|CA029563 HZ65J06r HZ Hordeum vulgare subsp. v... 143 9e-033
gb|BJ544135.1|BJ544135 BJ544135 K. Sato unpublished cDNA li... 143 9e-033
gb|BJ545651.1|BJ545651 BJ545651 K. Sato unpublished cDNA li... 143 9e-033
gb|CB877573.1|CB877573 HP05G20T HP Hordeum vulgare subsp. v... 143 9e-033
gb|CB878510.1|CB878510 HP08M18T HP Hordeum vulgare subsp. v... 143 9e-033
gb|CB880006.1|CB880006 HM05D06w HM Hordeum vulgare subsp. v... 143 9e-033
gb|CD662944.1|CD662944 UCRHV18_03ch08_b1 Drought-stressed D... 143 9e-033
gb|CV053657.1|CV053657 BNEL101g1 Barley EST endosperm libra... 143 9e-033
gb|CV058072.1|CV058072 BNEL34a5 Barley EST endosperm librar... 143 9e-033
gb|CV060323.1|CV060323 BNEL56h2 Barley EST endosperm librar... 143 9e-033
gb|CV060618.1|CV060618 BNEL5C10 Barley EST endosperm librar... 143 9e-033
gb|CV061081.1|CV061081 BNEL64g12 Barley EST endosperm libra... 143 9e-033
gb|CV061370.1|CV061370 BNEL68a6 Barley EST endosperm librar... 143 9e-033
gb|CV063834.1|CV063834 BNEL93f9 Barley EST endosperm librar... 143 9e-033
gb|CK123633.1|CK123633 BES1824104m10 BES1824 Hordeum vulgar... 143 9e-033
gb|CK124001.1|CK124001 BES1824106h10 BES1824 Hordeum vulgar... 143 9e-033
gb|CK125851.1|CK125851 BES1824111A1d05 BES1824 Hordeum vulg... 143 9e-033
gb|CD662294.1|CD662294 UCRHV18_01bf10_b1 Drought-stressed D... 139 1e-031
gb|AL503813.1|AL503813 AL503813 Hordeum vulgare Barke roots... 137 6e-031
gb|AL508029.1|AL508029 AL508029 Hordeum vulgare Barke devel... 137 6e-031
gb|BM816165.1|BM816165 HC112F06_T3.ab1 HC Hordeum vulgare s... 137 6e-031
gb|BQ757904.1|BQ757904 EBem10_SQ005_K05_R embryo, 2 Day ger... 137 6e-031
gb|BU996438.1|BU996438 HM13J16r HM Hordeum vulgare subsp. v... 137 6e-031
gb|BU998876.1|BU998876 HI12G20r HI Hordeum vulgare subsp. v... 137 6e-031
gb|BI948827.1|BI948827 HVSMEl0010P05f Hordeum vulgare spike... 135 2e-030
gb|AV922757.1|AV922757 AV922757 K. Sato unpublished cDNA li... 135 2e-030
gb|BM444123.1|BM444123 EBem09_SQ004_D16_R embryo, 1 Day ger... 135 2e-030
gb|BI776312.2|BI776312 EBem04_SQ001_I10_R embryo, 12 DPA, n... 135 2e-030
gb|BF628778.2|BF628778 HVSMEb0008B20f Hordeum vulgare seedl... 131 3e-029
gb|BM376968.2|BM376968 EBem05_SQ003_L22_R embryo, 14 DPA, n... 131 3e-029
gb|AL501232.1|AL501232 AL501232 Hordeum vulgare Barke roots... 129 1e-028
gb|BQ459398.1|BQ459398 HA01D21r HA Hordeum vulgare subsp. v... 127 5e-028
gb|BQ761976.1|BQ761976 EBpi01_SQ005_N11_R pistil, 1 DPA, no... 127 5e-028
gb|BQ762525.1|BQ762525 EBro02_SQ004_L01 _R root, 3 week, hy... 127 5e-028
gb|BI777831.2|BI777831 EBro08_SQ002_D20_R root, 3 week, dro... 125 2e-027
gb|AL500756.1|AL500756 AL500756 Hordeum vulgare Barke roots... 123 8e-027
gb|AL501139.1|AL501139 AL501139 Hordeum vulgare Barke roots... 123 8e-027
gb|AL502695.1|AL502695 AL502695 Hordeum vulgare Barke roots... 123 8e-027
gb|AV909837.1|AV909837 AV909837 K. Sato unpublished cDNA li... 123 8e-027
gb|AV916320.1|AV916320 AV916320 K. Sato unpublished cDNA li... 123 8e-027
gb|AV924587.1|AV924587 AV924587 K. Sato unpublished cDNA li... 123 8e-027
gb|AV924595.1|AV924595 AV924595 K. Sato unpublished cDNA li... 123 8e-027
gb|AJ462508.1|AJ462508 AJ462508 S00002 Hordeum vulgare subs... 123 8e-027
gb|BM375354.2|BM375354 EBem06_SQ003_B16_R embryo, 21 DPA, n... 123 8e-027
gb|BM441381.2|BM441381 EBma05_SQ004_A24_R maternal, 12 DPA,... 123 8e-027
gb|BQ757901.1|BQ757901 EBem10_SQ005_J24_R embryo, 2 Day ger... 123 8e-027
gb|BQ765811.1|BQ765811 EBro03_SQ008_A12_R root, 3 week, wat... 123 8e-027
gb|CA026763.1|CA026763 HZ56O06r HZ Hordeum vulgare subsp. v... 123 8e-027
gb|BJ544945.1|BJ544945 BJ544945 K. Sato unpublished cDNA li... 123 8e-027
gb|BJ546317.1|BJ546317 BJ546317 K. Sato unpublished cDNA li... 123 8e-027
gb|BJ546429.1|BJ546429 BJ546429 K. Sato unpublished cDNA li... 123 8e-027
gb|BI951031.1|BI951031 HVSMEl0024B12f Hordeum vulgare spike... 119 1e-025
gb|AJ462507.1|AJ462507 AJ462507 S00002 Hordeum vulgare subs... 119 1e-025
gb|BI777044.2|BI777044 EBpi03_SQ001_L20_R pistil, 4 DPA, no... 115 2e-024
gb|AV916304.1|AV916304 AV916304 K. Sato unpublished cDNA li... 109 1e-022
gb|BM445268.2|BM445268 EBem09_SQ007_O14_R embryo, 1 Day ger... 109 1e-022
gb|BM096914.2|BM096914 EBma08_SQ001_P23_R maternal, 28 DPA,... 107 5e-022
gb|BI948894.1|BI948894 HVSMEl0011E22f Hordeum vulgare spike... 105 2e-021
gb|BU974544.1|BU974544 HB28E04r BC Hordeum vulgare subsp. v... 103 8e-021
gb|BU982951.1|BU982951 HA28B12r HA Hordeum vulgare subsp. v... 101 3e-020
gb|BU989732.1|BU989732 HF22I20r HF Hordeum vulgare subsp. v... 100 1e-019
gb|BI952439.1|BI952439 HVSMEm0006H01f Hordeum vulgare green... 98 5e-019
gb|BI957910.1|BI957910 HVSMEn0012B15f Hordeum vulgare rachi... 98 5e-019
gb|BM444450.1|BM444450 EBem09_SQ005_E10_R embryo, 1 Day ger... 94 7e-018
gb|BJ544836.1|BJ544836 BJ544836 K. Sato unpublished cDNA li... 92 3e-017
gb|BQ759232.1|BQ759232 EBpi01_SQ001_H01_R pistil, 1 DPA, no... 86 2e-015
gb|BG301139.2|BG301139 HVSMEb0019L02f Hordeum vulgare seedl... 84 7e-015
gb|BM374436.1|BM374436 EBpi03_SQ003_J23_R pistil, 4 DPA, no... 62 3e-008
gb|AJ433976.1|AJ433976 AJ433976 S00002 Hordeum vulgare subs... 54 6e-006
gb|BQ757877.1|BQ757877 EBem10_SQ005_I05_R embryo, 2 Day ger... 50 1e-004
gb|BF627613.3|BF627613 HVSMEb0005F08f Hordeum vulgare seedl... 46 0.002
gb|BM098324.2|BM098324 EBem08_SQ002_F17_R embryo, 40 DPA, n... 46 0.002
gb|CD662540.1|CD662540 UCRHV18_02bb10_b1 Drought-stressed D... 46 0.002
gb|CV060206.1|CV060206 BNEL55f1 Barley EST endosperm librar... 46 0.002
gb|AV910855.1|AV910855 AV910855 K. Sato unpublished cDNA li... 44 0.006
gb|CA021951.1|CA021951 HZ41K16r HZ Hordeum vulgare subsp. v... 40 0.096
gb|BI953305.1|BI953305 HVSMEm0012B17f Hordeum vulgare green... 38 0.38
gb|CV064225.1|CV064225 BNEL99e10 Barley EST endosperm libra... 38 0.38
>gb|BI947685.1|BI947685 HVSMEl0006H01f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0006H01f, mRNA sequence
Length = 846
Score = 151 bits (76), Expect = 4e-035
Identities = 196/236 (83%)
Strand = Plus / Minus
Query: 330 tcacttcttcagatgggggaagcactggtacacgtctgtcttgggatgcttggcctcggc 389
||||| ||| || ||||||||||||||| | ||| |||| |||||||| ||||||||
Sbjct: 262 tcactgcttgaggtgggggaagcactggacaaggtcgctcttcggatgcttcgcctcggc 203
Query: 390 gtgctcccggcacttcacttcagtcgtggtacacatgaatgtttgcatgcacactttgca 449
||||||| |||||| |||||| ||||| |||||||| || |||||||| | |||||
Sbjct: 202 gtgctccttgcactttgcttcagaggtggtgcacatgaaagtctgcatgcatatcttgca 143
Query: 450 ctggatgctcatggccttcttgttggtctcgagctggctccccttggcccccttgttctt 509
||||||| |||||||||||||||||| ||||||||||||||||||| | ||||| |||
Sbjct: 142 ctggatgttcatggccttcttgttggcctcgagctggctccccttgccgcccttcagctt 83
Query: 510 ctccaagttgcgctcgcgggccatcttggacttctggccgttgccaccgcccatgg 565
||| | ||| | ||| | ||||||||||||||||| ||||||| ||||||||||
Sbjct: 82 ctcgaggttcctctccctcgccatcttggacttctgagcgttgccgccgcccatgg 27
>gb|BI779089.2|BI779089 EBro01_SQ002_O18_R root, 3 week, hydroponic grown, no treatment, cv
Optic, EBro01 Hordeum vulgare subsp. vulgare cDNA clone
EBro01_SQ002_O18 5', mRNA sequence
Length = 362
Score = 151 bits (76), Expect = 4e-035
Identities = 196/236 (83%)
Strand = Plus / Minus
Query: 330 tcacttcttcagatgggggaagcactggtacacgtctgtcttgggatgcttggcctcggc 389
||||| ||| || ||||||||||||||| | ||| |||| |||||||| ||||||||
Sbjct: 242 tcactgcttgaggtgggggaagcactggacaaggtcgctcttcggatgcttcgcctcggc 183
Query: 390 gtgctcccggcacttcacttcagtcgtggtacacatgaatgtttgcatgcacactttgca 449
||||||| |||||| |||||| ||||| |||||||| || |||||||| | |||||
Sbjct: 182 gtgctccttgcactttgcttcagaggtggtgcacatgaaagtctgcatgcatatcttgca 123
Query: 450 ctggatgctcatggccttcttgttggtctcgagctggctccccttggcccccttgttctt 509
||||||| |||||||||||||||||| ||||||||||||||||||| | ||||| |||
Sbjct: 122 ctggatgttcatggccttcttgttggcctcgagctggctccccttgccgcccttcagctt 63
Query: 510 ctccaagttgcgctcgcgggccatcttggacttctggccgttgccaccgcccatgg 565
||| | ||| | ||| | ||||||||||||||||| ||||||| ||||||||||
Sbjct: 62 ctcgaggttcctctccctcgccatcttggacttctgagcgttgccgccgcccatgg 7
>gb|AL450589.1|AL450589 AL450589 Hordeum vulgare Barke etiolated leaves Hordeum vulgare
subsp. vulgare cDNA clone HK03E21u 5', mRNA sequence
Length = 492
Score = 143 bits (72), Expect = 9e-033
Identities = 195/236 (82%)
Strand = Plus / Minus
Query: 330 tcacttcttcagatgggggaagcactggtacacgtctgtcttgggatgcttggcctcggc 389
||||| ||| || ||||||||||||||| | ||| |||| |||||||| ||||||||
Sbjct: 278 tcactgcttgaggtgggggaagcactggacaaggtcgctcttcggatgcttcgcctcggc 219
Query: 390 gtgctcccggcacttcacttcagtcgtggtacacatgaatgtttgcatgcacactttgca 449
||||||| |||||| |||||| ||||| || ||||| || |||||||| | |||||
Sbjct: 218 gtgctccttgcactttgcttcagaggtggtgcagatgaaagtctgcatgcatatcttgca 159
Query: 450 ctggatgctcatggccttcttgttggtctcgagctggctccccttggcccccttgttctt 509
||||||| |||||||||||||||||| ||||||||||||||||||| | ||||| |||
Sbjct: 158 ctggatgttcatggccttcttgttggcctcgagctggctccccttgccgcccttcagctt 99
Query: 510 ctccaagttgcgctcgcgggccatcttggacttctggccgttgccaccgcccatgg 565
||| | ||| | ||| | ||||||||||||||||| ||||||| ||||||||||
Sbjct: 98 ctcgaggttcctctccctcgccatcttggacttctgagcgttgccgccgcccatgg 43
>gb|AL503351.1|AL503351 AL503351 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW01M06T 5', mRNA sequence
Length = 530
Score = 143 bits (72), Expect = 9e-033
Identities = 195/236 (82%)
Strand = Plus / Minus
Query: 330 tcacttcttcagatgggggaagcactggtacacgtctgtcttgggatgcttggcctcggc 389
||||| ||| || ||||||||||||||| | ||| |||| |||||||| ||||||||
Sbjct: 274 tcactgcttgaggtgggggaagcactggacaaggtcgctcttcggatgcttcgcctcggc 215
Query: 390 gtgctcccggcacttcacttcagtcgtggtacacatgaatgtttgcatgcacactttgca 449
||||||| |||||| |||||| ||||| || ||||| || |||||||| | |||||
Sbjct: 214 gtgctccttgcactttgcttcagaggtggtgcagatgaaagtctgcatgcatatcttgca 155
Query: 450 ctggatgctcatggccttcttgttggtctcgagctggctccccttggcccccttgttctt 509
||||||| |||||||||||||||||| ||||||||||||||||||| | ||||| |||
Sbjct: 154 ctggatgttcatggccttcttgttggcctcgagctggctccccttgccgcccttcagctt 95
Query: 510 ctccaagttgcgctcgcgggccatcttggacttctggccgttgccaccgcccatgg 565
||| | ||| | ||| | ||||||||||||||||| ||||||| ||||||||||
Sbjct: 94 ctcgaggttcctctccctcgccatcttggacttctgagcgttgccgccgcccatgg 39
>gb|AL503714.1|AL503714 AL503714 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW03C23T 5', mRNA sequence
Length = 492
Score = 143 bits (72), Expect = 9e-033
Identities = 195/236 (82%)
Strand = Plus / Minus
Query: 330 tcacttcttcagatgggggaagcactggtacacgtctgtcttgggatgcttggcctcggc 389
||||| ||| || ||||||||||||||| | ||| |||| |||||||| ||||||||
Sbjct: 275 tcactgcttgaggtgggggaagcactggacaaggtcgctcttcggatgcttcgcctcggc 216
Query: 390 gtgctcccggcacttcacttcagtcgtggtacacatgaatgtttgcatgcacactttgca 449
||||||| |||||| |||||| ||||| || ||||| || |||||||| | |||||
Sbjct: 215 gtgctccttgcactttgcttcagaggtggtgcagatgaaagtctgcatgcatatcttgca 156
Query: 450 ctggatgctcatggccttcttgttggtctcgagctggctccccttggcccccttgttctt 509
||||||| |||||||||||||||||| ||||||||||||||||||| | ||||| |||
Sbjct: 155 ctggatgttcatggccttcttgttggcctcgagctggctccccttgccgcccttcagctt 96
Query: 510 ctccaagttgcgctcgcgggccatcttggacttctggccgttgccaccgcccatgg 565
||| | ||| | ||| | ||||||||||||||||| ||||||| ||||||||||
Sbjct: 95 ctcgaggttcctctccctcgccatcttggacttctgagcgttgccgccgcccatgg 40
>gb|AL505427.1|AL505427 AL505427 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW08G24V 5', mRNA sequence
Length = 528
Score = 143 bits (72), Expect = 9e-033
Identities = 195/236 (82%)
Strand = Plus / Minus
Query: 330 tcacttcttcagatgggggaagcactggtacacgtctgtcttgggatgcttggcctcggc 389
||||| ||| || ||||||||||||||| | ||| |||| |||||||| ||||||||
Sbjct: 273 tcactgcttgaggtgggggaagcactggacaaggtcgctcttcggatgcttcgcctcggc 214
Query: 390 gtgctcccggcacttcacttcagtcgtggtacacatgaatgtttgcatgcacactttgca 449
||||||| |||||| |||||| ||||| || ||||| || |||||||| | |||||
Sbjct: 213 gtgctccttgcactttgcttcagaggtggtgcagatgaaagtctgcatgcatatcttgca 154
Query: 450 ctggatgctcatggccttcttgttggtctcgagctggctccccttggcccccttgttctt 509
||||||| |||||||||||||||||| ||||||||||||||||||| | ||||| |||
Sbjct: 153 ctggatgttcatggccttcttgttggcctcgagctggctccccttgccgcccttcagctt 94
Query: 510 ctccaagttgcgctcgcgggccatcttggacttctggccgttgccaccgcccatgg 565
||| | ||| | ||| | ||||||||||||||||| ||||||| ||||||||||
Sbjct: 93 ctcgaggttcctctccctcgccatcttggacttctgagcgttgccgccgcccatgg 38
>gb|AL507408.1|AL507408 AL507408 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY05H15V 5',
mRNA sequence
Length = 481
Score = 143 bits (72), Expect = 9e-033
Identities = 195/236 (82%)
Strand = Plus / Minus
Query: 330 tcacttcttcagatgggggaagcactggtacacgtctgtcttgggatgcttggcctcggc 389
||||| ||| || ||||||||||||||| | ||| |||| |||||||| ||||||||
Sbjct: 268 tcactgcttgaggtgggggaagcactggacaaggtcgctcttcggatgcttcgcctcggc 209
Query: 390 gtgctcccggcacttcacttcagtcgtggtacacatgaatgtttgcatgcacactttgca 449
||||||| |||||| |||||| ||||| || ||||| || |||||||| | |||||
Sbjct: 208 gtgctccttgcactttgcttcagaggtggtgcagatgaaagtctgcatgcatatcttgca 149
Query: 450 ctggatgctcatggccttcttgttggtctcgagctggctccccttggcccccttgttctt 509
||||||| |||||||||||||||||| ||||||||||||||||||| | ||||| |||
Sbjct: 148 ctggatgttcatggccttcttgttggcctcgagctggctccccttgccgcccttcagctt 89
Query: 510 ctccaagttgcgctcgcgggccatcttggacttctggccgttgccaccgcccatgg 565
||| | ||| | ||| | ||||||||||||||||| ||||||| ||||||||||
Sbjct: 88 ctcgaggttcctctccctcgccatcttggacttctgagcgttgccgccgcccatgg 33
>gb|AL510613.1|AL510613 AL510613 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY05H15u 3',
mRNA sequence
Length = 481
Score = 143 bits (72), Expect = 9e-033
Identities = 195/236 (82%)
Strand = Plus / Plus
Query: 330 tcacttcttcagatgggggaagcactggtacacgtctgtcttgggatgcttggcctcggc 389
||||| ||| || ||||||||||||||| | ||| |||| |||||||| ||||||||
Sbjct: 214 tcactgcttgaggtgggggaagcactggacaaggtcgctcttcggatgcttcgcctcggc 273
Query: 390 gtgctcccggcacttcacttcagtcgtggtacacatgaatgtttgcatgcacactttgca 449
||||||| |||||| |||||| ||||| || ||||| || |||||||| | |||||
Sbjct: 274 gtgctccttgcactttgcttcagaggtggtgcagatgaaagtctgcatgcatatcttgca 333
Query: 450 ctggatgctcatggccttcttgttggtctcgagctggctccccttggcccccttgttctt 509
||||||| |||||||||||||||||| ||||||||||||||||||| | ||||| |||
Sbjct: 334 ctggatgttcatggccttcttgttggcctcgagctggctccccttgccgcccttcagctt 393
Query: 510 ctccaagttgcgctcgcgggccatcttggacttctggccgttgccaccgcccatgg 565
||| | ||| | ||| | ||||||||||||||||| ||||||| ||||||||||
Sbjct: 394 ctcgaggttcctctccctcgccatcttggacttctgagcgttgccgccgcccatgg 449
>gb|AL511285.1|AL511285 AL511285 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY07J03u 3',
mRNA sequence
Length = 524
Score = 143 bits (72), Expect = 9e-033
Identities = 195/236 (82%)
Strand = Plus / Plus
Query: 330 tcacttcttcagatgggggaagcactggtacacgtctgtcttgggatgcttggcctcggc 389
||||| ||| || ||||||||||||||| | ||| |||| |||||||| ||||||||
Sbjct: 242 tcactgcttgaggtgggggaagcactggacaaggtcgctcttcggatgcttcgcctcggc 301
Query: 390 gtgctcccggcacttcacttcagtcgtggtacacatgaatgtttgcatgcacactttgca 449
||||||| |||||| |||||| ||||| || ||||| || |||||||| | |||||
Sbjct: 302 gtgctccttgcactttgcttcagaggtggtgcagatgaaagtctgcatgcatatcttgca 361
Query: 450 ctggatgctcatggccttcttgttggtctcgagctggctccccttggcccccttgttctt 509
||||||| |||||||||||||||||| ||||||||||||||||||| | ||||| |||
Sbjct: 362 ctggatgttcatggccttcttgttggcctcgagctggctccccttgccgcccttcagctt 421
Query: 510 ctccaagttgcgctcgcgggccatcttggacttctggccgttgccaccgcccatgg 565
||| | ||| | ||| | ||||||||||||||||| ||||||| ||||||||||
Sbjct: 422 ctcgaggttcctctccctcgccatcttggacttctgagcgttgccgccgcccatgg 477
>gb|BF625390.2|BF625390 HVSMEa0008M17f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0008M17f, mRNA sequence
Length = 710
Score = 143 bits (72), Expect = 9e-033
Identities = 195/236 (82%)
Strand = Plus / Minus
Query: 330 tcacttcttcagatgggggaagcactggtacacgtctgtcttgggatgcttggcctcggc 389
||||| ||| || ||||||||||||||| | ||| |||| |||||||| ||||||||
Sbjct: 295 tcactgcttgaggtgggggaagcactggacaaggtcgctcttcggatgcttcgcctcggc 236
Query: 390 gtgctcccggcacttcacttcagtcgtggtacacatgaatgtttgcatgcacactttgca 449
||||||| |||||| |||||| ||||| || ||||| || |||||||| | |||||
Sbjct: 235 gtgctccttgcactttgcttcagaggtggtgcagatgaaagtctgcatgcatatcttgca 176
Query: 450 ctggatgctcatggccttcttgttggtctcgagctggctccccttggcccccttgttctt 509
||||||| |||||||||||||||||| ||||||||||||||||||| | ||||| |||
Sbjct: 175 ctggatgttcatggccttcttgttggcctcgagctggctccccttgccgcccttcagctt 116
Query: 510 ctccaagttgcgctcgcgggccatcttggacttctggccgttgccaccgcccatgg 565
||| | ||| | ||| | ||||||||||||||||| ||||||| ||||||||||
Sbjct: 115 ctcgaggttcctctccctcgccatcttggacttctgagcgttgccgccgcccatgg 60
>gb|BF267079.2|BF267079 HV_CEa0016O05f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0016O05f, mRNA sequence
Length = 854
Score = 143 bits (72), Expect = 9e-033
Identities = 195/236 (82%)
Strand = Plus / Minus
Query: 330 tcacttcttcagatgggggaagcactggtacacgtctgtcttgggatgcttggcctcggc 389
||||| ||| || ||||||||||||||| | ||| |||| |||||||| ||||||||
Sbjct: 271 tcactgcttgaggtgggggaagcactggacaaggtcgctcttcggatgcttcgcctcggc 212
Query: 390 gtgctcccggcacttcacttcagtcgtggtacacatgaatgtttgcatgcacactttgca 449
||||||| |||||| |||||| ||||| || ||||| || |||||||| | |||||
Sbjct: 211 gtgctccttgcactttgcttcagaggtggtgcagatgaaagtctgcatgcatatcttgca 152
Query: 450 ctggatgctcatggccttcttgttggtctcgagctggctccccttggcccccttgttctt 509
||||||| |||||||||||||||||| ||||||||||||||||||| | ||||| |||
Sbjct: 151 ctggatgttcatggccttcttgttggcctcgagctggctccccttgccgcccttcagctt 92
Query: 510 ctccaagttgcgctcgcgggccatcttggacttctggccgttgccaccgcccatgg 565
||| | ||| | ||| | ||||||||||||||||| ||||||| ||||||||||
Sbjct: 91 ctcgaggttcctctccctcgccatcttggacttctgagcgttgccgccgcccatgg 36
>gb|BG343463.2|BG343463 HVSMEg0005N08f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0005N08f, mRNA sequence
Length = 507
Score = 143 bits (72), Expect = 9e-033
Identities = 195/236 (82%)
Strand = Plus / Minus
Query: 330 tcacttcttcagatgggggaagcactggtacacgtctgtcttgggatgcttggcctcggc 389
||||| ||| || ||||||||||||||| | ||| |||| |||||||| ||||||||
Sbjct: 256 tcactgcttgaggtgggggaagcactggacaaggtcgctcttcggatgcttcgcctcggc 197
Query: 390 gtgctcccggcacttcacttcagtcgtggtacacatgaatgtttgcatgcacactttgca 449
||||||| |||||| |||||| ||||| || ||||| || |||||||| | |||||
Sbjct: 196 gtgctccttgcactttgcttcagaggtggtgcagatgaaagtctgcatgcatatcttgca 137
Query: 450 ctggatgctcatggccttcttgttggtctcgagctggctccccttggcccccttgttctt 509
||||||| |||||||||||||||||| ||||||||||||||||||| | ||||| |||
Sbjct: 136 ctggatgttcatggccttcttgttggcctcgagctggctccccttgccgcccttcagctt 77
Query: 510 ctccaagttgcgctcgcgggccatcttggacttctggccgttgccaccgcccatgg 565
||| | ||| | ||| | ||||||||||||||||| ||||||| ||||||||||
Sbjct: 76 ctcgaggttcctctccctcgccatcttggacttctgagcgttgccgccgcccatgg 21
>gb|BE454194.3|BE454194 HVSMEh0093D11f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0093D11f, mRNA sequence
Length = 560
Score = 143 bits (72), Expect = 9e-033
Identities = 195/236 (82%)
Strand = Plus / Minus
Query: 330 tcacttcttcagatgggggaagcactggtacacgtctgtcttgggatgcttggcctcggc 389
||||| ||| || ||||||||||||||| | ||| |||| |||||||| ||||||||
Sbjct: 285 tcactgcttgaggtgggggaagcactggacaaggtcgctcttcggatgcttcgcctcggc 226
Query: 390 gtgctcccggcacttcacttcagtcgtggtacacatgaatgtttgcatgcacactttgca 449
||||||| |||||| |||||| ||||| || ||||| || |||||||| | |||||
Sbjct: 225 gtgctccttgcactttgcttcagaggtggtgcagatgaaagtctgcatgcatatcttgca 166
Query: 450 ctggatgctcatggccttcttgttggtctcgagctggctccccttggcccccttgttctt 509
||||||| |||||||||||||||||| ||||||||||||||||||| | ||||| |||
Sbjct: 165 ctggatgttcatggccttcttgttggcctcgagctggctccccttgccgcccttcagctt 106
Query: 510 ctccaagttgcgctcgcgggccatcttggacttctggccgttgccaccgcccatgg 565
||| | ||| | ||| | ||||||||||||||||| ||||||| ||||||||||
Sbjct: 105 ctcgaggttcctctccctcgccatcttggacttctgagcgttgccgccgcccatgg 50
>gb|BG417020.2|BG417020 HVSMEk0015L16f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0015L16f, mRNA sequence
Length = 552
Score = 143 bits (72), Expect = 9e-033
Identities = 195/236 (82%)
Strand = Plus / Minus
Query: 330 tcacttcttcagatgggggaagcactggtacacgtctgtcttgggatgcttggcctcggc 389
||||| ||| || ||||||||||||||| | ||| |||| |||||||| ||||||||
Sbjct: 278 tcactgcttgaggtgggggaagcactggacaaggtcgctcttcggatgcttcgcctcggc 219
Query: 390 gtgctcccggcacttcacttcagtcgtggtacacatgaatgtttgcatgcacactttgca 449
||||||| |||||| |||||| ||||| || ||||| || |||||||| | |||||
Sbjct: 218 gtgctccttgcactttgcttcagaggtggtgcagatgaaagtctgcatgcatatcttgca 159
Query: 450 ctggatgctcatggccttcttgttggtctcgagctggctccccttggcccccttgttctt 509
||||||| |||||||||||||||||| ||||||||||||||||||| | ||||| |||
Sbjct: 158 ctggatgttcatggccttcttgttggcctcgagctggctccccttgccgcccttcagctt 99
Query: 510 ctccaagttgcgctcgcgggccatcttggacttctggccgttgccaccgcccatgg 565
||| | ||| | ||| | ||||||||||||||||| ||||||| ||||||||||
Sbjct: 98 ctcgaggttcctctccctcgccatcttggacttctgagcgttgccgccgcccatgg 43
>gb|BF261440.3|BF261440 HV_CEa0001E16f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0001E16f, mRNA sequence
Length = 537
Score = 143 bits (72), Expect = 9e-033
Identities = 195/236 (82%)
Strand = Plus / Minus
Query: 330 tcacttcttcagatgggggaagcactggtacacgtctgtcttgggatgcttggcctcggc 389
||||| ||| || ||||||||||||||| | ||| |||| |||||||| ||||||||
Sbjct: 274 tcactgcttgaggtgggggaagcactggacaaggtcgctcttcggatgcttcgcctcggc 215
Query: 390 gtgctcccggcacttcacttcagtcgtggtacacatgaatgtttgcatgcacactttgca 449
||||||| |||||| |||||| ||||| || ||||| || |||||||| | |||||
Sbjct: 214 gtgctccttgcactttgcttcagaggtggtgcagatgaaagtctgcatgcatatcttgca 155
Query: 450 ctggatgctcatggccttcttgttggtctcgagctggctccccttggcccccttgttctt 509
||||||| |||||||||||||||||| ||||||||||||||||||| | ||||| |||
Sbjct: 154 ctggatgttcatggccttcttgttggcctcgagctggctccccttgccgcccttcagctt 95
Query: 510 ctccaagttgcgctcgcgggccatcttggacttctggccgttgccaccgcccatgg 565
||| | ||| | ||| | ||||||||||||||||| ||||||| ||||||||||
Sbjct: 94 ctcgaggttcctctccctcgccatcttggacttctgagcgttgccgccgcccatgg 39
>gb|BE214876.3|BE214876 HV_CEb0004P14f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0004P14f, mRNA sequence
Length = 517
Score = 143 bits (72), Expect = 9e-033
Identities = 195/236 (82%)
Strand = Plus / Minus
Query: 330 tcacttcttcagatgggggaagcactggtacacgtctgtcttgggatgcttggcctcggc 389
||||| ||| || ||||||||||||||| | ||| |||| |||||||| ||||||||
Sbjct: 261 tcactgcttgaggtgggggaagcactggacaaggtcgctcttcggatgcttcgcctcggc 202
Query: 390 gtgctcccggcacttcacttcagtcgtggtacacatgaatgtttgcatgcacactttgca 449
||||||| |||||| |||||| ||||| || ||||| || |||||||| | |||||
Sbjct: 201 gtgctccttgcactttgcttcagaggtggtgcagatgaaagtctgcatgcatatcttgca 142
Query: 450 ctggatgctcatggccttcttgttggtctcgagctggctccccttggcccccttgttctt 509
||||||| |||||||||||||||||| ||||||||||||||||||| | ||||| |||
Sbjct: 141 ctggatgttcatggccttcttgttggcctcgagctggctccccttgccgcccttcagctt 82
Query: 510 ctccaagttgcgctcgcgggccatcttggacttctggccgttgccaccgcccatgg 565
||| | ||| | ||| | ||||||||||||||||| ||||||| ||||||||||
Sbjct: 81 ctcgaggttcctctccctcgccatcttggacttctgagcgttgccgccgcccatgg 26
>gb|AV908970.1|AV908970 AV908970 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak11b19 5', mRNA sequence
Length = 406
Score = 143 bits (72), Expect = 9e-033
Identities = 195/236 (82%)
Strand = Plus / Minus
Query: 330 tcacttcttcagatgggggaagcactggtacacgtctgtcttgggatgcttggcctcggc 389
||||| ||| || ||||||||||||||| | ||| |||| |||||||| ||||||||
Sbjct: 264 tcactgcttgaggtgggggaagcactggacaaggtcgctcttcggatgcttcgcctcggc 205
Query: 390 gtgctcccggcacttcacttcagtcgtggtacacatgaatgtttgcatgcacactttgca 449
||||||| |||||| |||||| ||||| || ||||| || |||||||| | |||||
Sbjct: 204 gtgctccttgcactttgcttcagaggtggtgcagatgaaagtctgcatgcatatcttgca 145
Query: 450 ctggatgctcatggccttcttgttggtctcgagctggctccccttggcccccttgttctt 509
||||||| |||||||||||||||||| ||||||||||||||||||| | ||||| |||
Sbjct: 144 ctggatgttcatggccttcttgttggcctcgagctggctccccttgccgcccttcagctt 85
Query: 510 ctccaagttgcgctcgcgggccatcttggacttctggccgttgccaccgcccatgg 565
||| | ||| | ||| | ||||||||||||||||| ||||||| ||||||||||
Sbjct: 84 ctcgaggttcctctccctcgccatcttggacttctgagcgttgccgccgcccatgg 29
>gb|AV911940.1|AV911940 AV911940 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak2c17 3', mRNA sequence
Length = 450
Score = 143 bits (72), Expect = 9e-033
Identities = 195/236 (82%)
Strand = Plus / Plus
Query: 330 tcacttcttcagatgggggaagcactggtacacgtctgtcttgggatgcttggcctcggc 389
||||| ||| || ||||||||||||||| | ||| |||| |||||||| ||||||||
Sbjct: 170 tcactgcttgaggtgggggaagcactggacaaggtcgctcttcggatgcttcgcctcggc 229
Query: 390 gtgctcccggcacttcacttcagtcgtggtacacatgaatgtttgcatgcacactttgca 449
||||||| |||||| |||||| ||||| || ||||| || |||||||| | |||||
Sbjct: 230 gtgctccttgcactttgcttcagaggtggtgcagatgaaagtctgcatgcatatcttgca 289
Query: 450 ctggatgctcatggccttcttgttggtctcgagctggctccccttggcccccttgttctt 509
||||||| |||||||||||||||||| ||||||||||||||||||| | ||||| |||
Sbjct: 290 ctggatgttcatggccttcttgttggcctcgagctggctccccttgccgcccttcagctt 349
Query: 510 ctccaagttgcgctcgcgggccatcttggacttctggccgttgccaccgcccatgg 565
||| | ||| | ||| | ||||||||||||||||| ||||||| ||||||||||
Sbjct: 350 ctcgaggttcctctccctcgccatcttggacttctgagcgttgccgccgcccatgg 405
>gb|AV921734.1|AV921734 AV921734 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags12j04 3', mRNA sequence
Length = 469
Score = 143 bits (72), Expect = 9e-033
Identities = 195/236 (82%)
Strand = Plus / Plus
Query: 330 tcacttcttcagatgggggaagcactggtacacgtctgtcttgggatgcttggcctcggc 389
||||| ||| || ||||||||||||||| | ||| |||| |||||||| ||||||||
Sbjct: 199 tcactgcttgaggtgggggaagcactggacaaggtcgctcttcggatgcttcgcctcggc 258
Query: 390 gtgctcccggcacttcacttcagtcgtggtacacatgaatgtttgcatgcacactttgca 449
||||||| |||||| |||||| ||||| || ||||| || |||||||| | |||||
Sbjct: 259 gtgctccttgcactttgcttcagaggtggtgcagatgaaagtctgcatgcatatcttgca 318
Query: 450 ctggatgctcatggccttcttgttggtctcgagctggctccccttggcccccttgttctt 509
||||||| |||||||||||||||||| ||||||||||||||||||| | ||||| |||
Sbjct: 319 ctggatgttcatggccttcttgttggcctcgagctggctccccttgccgcccttcagctt 378
Query: 510 ctccaagttgcgctcgcgggccatcttggacttctggccgttgccaccgcccatgg 565
||| | ||| | ||| | ||||||||||||||||| ||||||| ||||||||||
Sbjct: 379 ctcgaggttcctctccctcgccatcttggacttctgagcgttgccgccgcccatgg 434
>gb|AV921751.1|AV921751 AV921751 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags12k04 3', mRNA sequence
Length = 469
Score = 143 bits (72), Expect = 9e-033
Identities = 195/236 (82%)
Strand = Plus / Plus
Query: 330 tcacttcttcagatgggggaagcactggtacacgtctgtcttgggatgcttggcctcggc 389
||||| ||| || ||||||||||||||| | ||| |||| |||||||| ||||||||
Sbjct: 199 tcactgcttgaggtgggggaagcactggacaaggtcgctcttcggatgcttcgcctcggc 258
Query: 390 gtgctcccggcacttcacttcagtcgtggtacacatgaatgtttgcatgcacactttgca 449
||||||| |||||| |||||| ||||| || ||||| || |||||||| | |||||
Sbjct: 259 gtgctccttgcactttgcttcagaggtggtgcagatgaaagtctgcatgcatatcttgca 318
Query: 450 ctggatgctcatggccttcttgttggtctcgagctggctccccttggcccccttgttctt 509
||||||| |||||||||||||||||| ||||||||||||||||||| | ||||| |||
Sbjct: 319 ctggatgttcatggccttcttgttggcctcgagctggctccccttgccgcccttcagctt 378
Query: 510 ctccaagttgcgctcgcgggccatcttggacttctggccgttgccaccgcccatgg 565
||| | ||| | ||| | ||||||||||||||||| ||||||| ||||||||||
Sbjct: 379 ctcgaggttcctctccctcgccatcttggacttctgagcgttgccgccgcccatgg 434
>gb|AV923307.1|AV923307 AV923307 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd12j20 5', mRNA sequence
Length = 565
Score = 143 bits (72), Expect = 9e-033
Identities = 195/236 (82%)
Strand = Plus / Minus
Query: 330 tcacttcttcagatgggggaagcactggtacacgtctgtcttgggatgcttggcctcggc 389
||||| ||| || ||||||||||||||| | ||| |||| |||||||| ||||||||
Sbjct: 328 tcactgcttgaggtgggggaagcactggacaaggtcgctcttcggatgcttcgcctcggc 269
Query: 390 gtgctcccggcacttcacttcagtcgtggtacacatgaatgtttgcatgcacactttgca 449
||||||| |||||| |||||| ||||| || ||||| || |||||||| | |||||
Sbjct: 268 gtgctccttgcactttgcttcagaggtggtgcagatgaaagtctgcatgcatatcttgca 209
Query: 450 ctggatgctcatggccttcttgttggtctcgagctggctccccttggcccccttgttctt 509
||||||| |||||||||||||||||| ||||||||||||||||||| | ||||| |||
Sbjct: 208 ctggatgttcatggccttcttgttggcctcgagctggctccccttgccgcccttcagctt 149
Query: 510 ctccaagttgcgctcgcgggccatcttggacttctggccgttgccaccgcccatgg 565
||| | ||| | ||| | ||||||||||||||||| ||||||| ||||||||||
Sbjct: 148 ctcgaggttcctctccctcgccatcttggacttctgagcgttgccgccgcccatgg 93
>gb|AV924567.1|AV924567 AV924567 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd16b07 5', mRNA sequence
Length = 508
Score = 143 bits (72), Expect = 9e-033
Identities = 195/236 (82%)
Strand = Plus / Minus
Query: 330 tcacttcttcagatgggggaagcactggtacacgtctgtcttgggatgcttggcctcggc 389
||||| ||| || ||||||||||||||| | ||| |||| |||||||| ||||||||
Sbjct: 264 tcactgcttgaggtgggggaagcactggacaaggtcgctcttcggatgcttcgcctcggc 205
Query: 390 gtgctcccggcacttcacttcagtcgtggtacacatgaatgtttgcatgcacactttgca 449
||||||| |||||| |||||| ||||| || ||||| || |||||||| | |||||
Sbjct: 204 gtgctccttgcactttgcttcagaggtggtgcagatgaaagtctgcatgcatatcttgca 145
Query: 450 ctggatgctcatggccttcttgttggtctcgagctggctccccttggcccccttgttctt 509
||||||| |||||||||||||||||| ||||||||||||||||||| | ||||| |||
Sbjct: 144 ctggatgttcatggccttcttgttggcctcgagctggctccccttgccgcccttcagctt 85
Query: 510 ctccaagttgcgctcgcgggccatcttggacttctggccgttgccaccgcccatgg 565
||| | ||| | ||| | ||||||||||||||||| ||||||| ||||||||||
Sbjct: 84 ctcgaggttcctctccctcgccatcttggacttctgagcgttgccgccgcccatgg 29
>gb|AV924568.1|AV924568 AV924568 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd16b08 5', mRNA sequence
Length = 559
Score = 143 bits (72), Expect = 9e-033
Identities = 195/236 (82%)
Strand = Plus / Minus
Query: 330 tcacttcttcagatgggggaagcactggtacacgtctgtcttgggatgcttggcctcggc 389
||||| ||| || ||||||||||||||| | ||| |||| |||||||| ||||||||
Sbjct: 317 tcactgcttgaggtgggggaagcactggacaaggtcgctcttcggatgcttcgcctcggc 258
Query: 390 gtgctcccggcacttcacttcagtcgtggtacacatgaatgtttgcatgcacactttgca 449
||||||| |||||| |||||| ||||| || ||||| || |||||||| | |||||
Sbjct: 257 gtgctccttgcactttgcttcagaggtggtgcagatgaaagtctgcatgcatatcttgca 198
Query: 450 ctggatgctcatggccttcttgttggtctcgagctggctccccttggcccccttgttctt 509
||||||| |||||||||||||||||| ||||||||||||||||||| | ||||| |||
Sbjct: 197 ctggatgttcatggccttcttgttggcctcgagctggctccccttgccgcccttcagctt 138
Query: 510 ctccaagttgcgctcgcgggccatcttggacttctggccgttgccaccgcccatgg 565
||| | ||| | ||| | ||||||||||||||||| ||||||| ||||||||||
Sbjct: 137 ctcgaggttcctctccctcgccatcttggacttctgagcgttgccgccgcccatgg 82
>gb|AV927475.1|AV927475 AV927475 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd2d23 3', mRNA sequence
Length = 494
Score = 143 bits (72), Expect = 9e-033
Identities = 195/236 (82%)
Strand = Plus / Plus
Query: 330 tcacttcttcagatgggggaagcactggtacacgtctgtcttgggatgcttggcctcggc 389
||||| ||| || ||||||||||||||| | ||| |||| |||||||| ||||||||
Sbjct: 240 tcactgcttgaggtgggggaagcactggacaaggtcgctcttcggatgcttcgcctcggc 299
Query: 390 gtgctcccggcacttcacttcagtcgtggtacacatgaatgtttgcatgcacactttgca 449
||||||| |||||| |||||| ||||| || ||||| || |||||||| | |||||
Sbjct: 300 gtgctccttgcactttgcttcagaggtggtgcagatgaaagtctgcatgcatatcttgca 359
Query: 450 ctggatgctcatggccttcttgttggtctcgagctggctccccttggcccccttgttctt 509
||||||| |||||||||||||||||| ||||||||||||||||||| | ||||| |||
Sbjct: 360 ctggatgttcatggccttcttgttggcctcgagctggctccccttgccgcccttcagctt 419
Query: 510 ctccaagttgcgctcgcgggccatcttggacttctggccgttgccaccgcccatgg 565
||| | ||| | ||| | ||||||||||||||||| ||||||| ||||||||||
Sbjct: 420 ctcgaggttcctctccctcgccatcttggacttctgagcgttgccgccgcccatgg 475
>gb|AV928485.1|AV928485 AV928485 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basdj20 3', mRNA sequence
Length = 525
Score = 143 bits (72), Expect = 9e-033
Identities = 195/236 (82%)
Strand = Plus / Plus
Query: 330 tcacttcttcagatgggggaagcactggtacacgtctgtcttgggatgcttggcctcggc 389
||||| ||| || ||||||||||||||| | ||| |||| |||||||| ||||||||
Sbjct: 208 tcactgcttgaggtgggggaagcactggacaaggtcgctcttcggatgcttcgcctcggc 267
Query: 390 gtgctcccggcacttcacttcagtcgtggtacacatgaatgtttgcatgcacactttgca 449
||||||| |||||| |||||| ||||| || ||||| || |||||||| | |||||
Sbjct: 268 gtgctccttgcactttgcttcagaggtggtgcagatgaaagtctgcatgcatatcttgca 327
Query: 450 ctggatgctcatggccttcttgttggtctcgagctggctccccttggcccccttgttctt 509
||||||| |||||||||||||||||| ||||||||||||||||||| | ||||| |||
Sbjct: 328 ctggatgttcatggccttcttgttggcctcgagctggctccccttgccgcccttcagctt 387
Query: 510 ctccaagttgcgctcgcgggccatcttggacttctggccgttgccaccgcccatgg 565
||| | ||| | ||| | ||||||||||||||||| ||||||| ||||||||||
Sbjct: 388 ctcgaggttcctctccctcgccatcttggacttctgagcgttgccgccgcccatgg 443
>gb|AV929664.1|AV929664 AV929664 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd16b07 3', mRNA sequence
Length = 527
Score = 143 bits (72), Expect = 9e-033
Identities = 195/236 (82%)
Strand = Plus / Plus
Query: 330 tcacttcttcagatgggggaagcactggtacacgtctgtcttgggatgcttggcctcggc 389
||||| ||| || ||||||||||||||| | ||| |||| |||||||| ||||||||
Sbjct: 199 tcactgcttgaggtgggggaagcactggacaaggtcgctcttcggatgcttcgcctcggc 258
Query: 390 gtgctcccggcacttcacttcagtcgtggtacacatgaatgtttgcatgcacactttgca 449
||||||| |||||| |||||| ||||| || ||||| || |||||||| | |||||
Sbjct: 259 gtgctccttgcactttgcttcagaggtggtgcagatgaaagtctgcatgcatatcttgca 318
Query: 450 ctggatgctcatggccttcttgttggtctcgagctggctccccttggcccccttgttctt 509
||||||| |||||||||||||||||| ||||||||||||||||||| | ||||| |||
Sbjct: 319 ctggatgttcatggccttcttgttggcctcgagctggctccccttgccgcccttcagctt 378
Query: 510 ctccaagttgcgctcgcgggccatcttggacttctggccgttgccaccgcccatgg 565
||| | ||| | ||| | ||||||||||||||||| ||||||| ||||||||||
Sbjct: 379 ctcgaggttcctctccctcgccatcttggacttctgagcgttgccgccgcccatgg 434
>gb|AV929665.1|AV929665 AV929665 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd16b08 3', mRNA sequence
Length = 527
Score = 143 bits (72), Expect = 9e-033
Identities = 195/236 (82%)
Strand = Plus / Plus
Query: 330 tcacttcttcagatgggggaagcactggtacacgtctgtcttgggatgcttggcctcggc 389
||||| ||| || ||||||||||||||| | ||| |||| |||||||| ||||||||
Sbjct: 199 tcactgcttgaggtgggggaagcactggacaaggtcgctcttcggatgcttcgcctcggc 258
Query: 390 gtgctcccggcacttcacttcagtcgtggtacacatgaatgtttgcatgcacactttgca 449
||||||| |||||| |||||| ||||| || ||||| || |||||||| | |||||
Sbjct: 259 gtgctccttgcactttgcttcagaggtggtgcagatgaaagtctgcatgcatatcttgca 318
Query: 450 ctggatgctcatggccttcttgttggtctcgagctggctccccttggcccccttgttctt 509
||||||| |||||||||||||||||| ||||||||||||||||||| | ||||| |||
Sbjct: 319 ctggatgttcatggccttcttgttggcctcgagctggctccccttgccgcccttcagctt 378
Query: 510 ctccaagttgcgctcgcgggccatcttggacttctggccgttgccaccgcccatgg 565
||| | ||| | ||| | ||||||||||||||||| ||||||| ||||||||||
Sbjct: 379 ctcgaggttcctctccctcgccatcttggacttctgagcgttgccgccgcccatgg 434
>gb|AV929683.1|AV929683 AV929683 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd16c12 3', mRNA sequence
Length = 451
Score = 143 bits (72), Expect = 9e-033
Identities = 195/236 (82%)
Strand = Plus / Plus
Query: 330 tcacttcttcagatgggggaagcactggtacacgtctgtcttgggatgcttggcctcggc 389
||||| ||| || ||||||||||||||| | ||| |||| |||||||| ||||||||
Sbjct: 199 tcactgcttgaggtgggggaagcactggacaaggtcgctcttcggatgcttcgcctcggc 258
Query: 390 gtgctcccggcacttcacttcagtcgtggtacacatgaatgtttgcatgcacactttgca 449
||||||| |||||| |||||| ||||| || ||||| || |||||||| | |||||
Sbjct: 259 gtgctccttgcactttgcttcagaggtggtgcagatgaaagtctgcatgcatatcttgca 318
Query: 450 ctggatgctcatggccttcttgttggtctcgagctggctccccttggcccccttgttctt 509
||||||| |||||||||||||||||| ||||||||||||||||||| | ||||| |||
Sbjct: 319 ctggatgttcatggccttcttgttggcctcgagctggctccccttgccgcccttcagctt 378
Query: 510 ctccaagttgcgctcgcgggccatcttggacttctggccgttgccaccgcccatgg 565
||| | ||| | ||| | ||||||||||||||||| ||||||| ||||||||||
Sbjct: 379 ctcgaggttcctctccctcgccatcttggacttctgagcgttgccgccgcccatgg 434
>gb|AV929690.1|AV929690 AV929690 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd16c23 3', mRNA sequence
Length = 473
Score = 143 bits (72), Expect = 9e-033
Identities = 195/236 (82%)
Strand = Plus / Plus
Query: 330 tcacttcttcagatgggggaagcactggtacacgtctgtcttgggatgcttggcctcggc 389
||||| ||| || ||||||||||||||| | ||| |||| |||||||| ||||||||
Sbjct: 200 tcactgcttgaggtgggggaagcactggacaaggtcgctcttcggatgcttcgcctcggc 259
Query: 390 gtgctcccggcacttcacttcagtcgtggtacacatgaatgtttgcatgcacactttgca 449
||||||| |||||| |||||| ||||| || ||||| || |||||||| | |||||
Sbjct: 260 gtgctccttgcactttgcttcagaggtggtgcagatgaaagtctgcatgcatatcttgca 319
Query: 450 ctggatgctcatggccttcttgttggtctcgagctggctccccttggcccccttgttctt 509
||||||| |||||||||||||||||| ||||||||||||||||||| | ||||| |||
Sbjct: 320 ctggatgttcatggccttcttgttggcctcgagctggctccccttgccgcccttcagctt 379
Query: 510 ctccaagttgcgctcgcgggccatcttggacttctggccgttgccaccgcccatgg 565
||| | ||| | ||| | ||||||||||||||||| ||||||| ||||||||||
Sbjct: 380 ctcgaggttcctctccctcgccatcttggacttctgagcgttgccgccgcccatgg 435
>gb|BM816164.1|BM816164 HC107E09_SK.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC107E09_SK.ab1 similar to hypothetical protein [Cicer
arietinum],unknown protein [Arabidopsis thaliana],, mRNA
sequence
Length = 901
Score = 143 bits (72), Expect = 9e-033
Identities = 195/236 (82%)
Strand = Plus / Minus
Query: 330 tcacttcttcagatgggggaagcactggtacacgtctgtcttgggatgcttggcctcggc 389
||||| ||| || ||||||||||||||| | ||| |||| |||||||| ||||||||
Sbjct: 303 tcactgcttgaggtgggggaagcactggacaaggtcgctcttcggatgcttcgcctcggc 244
Query: 390 gtgctcccggcacttcacttcagtcgtggtacacatgaatgtttgcatgcacactttgca 449
||||||| |||||| |||||| ||||| || ||||| || |||||||| | |||||
Sbjct: 243 gtgctccttgcactttgcttcagaggtggtgcagatgaaagtctgcatgcatatcttgca 184
Query: 450 ctggatgctcatggccttcttgttggtctcgagctggctccccttggcccccttgttctt 509
||||||| |||||||||||||||||| ||||||||||||||||||| | ||||| |||
Sbjct: 183 ctggatgttcatggccttcttgttggcctcgagctggctccccttgccgcccttcagctt 124
Query: 510 ctccaagttgcgctcgcgggccatcttggacttctggccgttgccaccgcccatgg 565
||| | ||| | ||| | ||||||||||||||||| ||||||| ||||||||||
Sbjct: 123 ctcgaggttcctctccctcgccatcttggacttctgagcgttgccgccgcccatgg 68
>gb|BM816258.1|BM816258 HB106E10_SK.ab1 HB Hordeum vulgare subsp. vulgare cDNA clone
HB106E10_SK.ab1 similar to hypothetical protein [Cicer
arietinum],unknown protein [Arabidopsis thaliana],, mRNA
sequence
Length = 564
Score = 143 bits (72), Expect = 9e-033
Identities = 195/236 (82%)
Strand = Plus / Minus
Query: 330 tcacttcttcagatgggggaagcactggtacacgtctgtcttgggatgcttggcctcggc 389
||||| ||| || ||||||||||||||| | ||| |||| |||||||| ||||||||
Sbjct: 300 tcactgcttgaggtgggggaagcactggacaaggtcgctcttcggatgcttcgcctcggc 241
Query: 390 gtgctcccggcacttcacttcagtcgtggtacacatgaatgtttgcatgcacactttgca 449
||||||| |||||| |||||| ||||| || ||||| || |||||||| | |||||
Sbjct: 240 gtgctccttgcactttgcttcagaggtggtgcagatgaaagtctgcatgcatatcttgca 181
Query: 450 ctggatgctcatggccttcttgttggtctcgagctggctccccttggcccccttgttctt 509
||||||| |||||||||||||||||| ||||||||||||||||||| | ||||| |||
Sbjct: 180 ctggatgttcatggccttcttgttggcctcgagctggctccccttgccgcccttcagctt 121
Query: 510 ctccaagttgcgctcgcgggccatcttggacttctggccgttgccaccgcccatgg 565
||| | ||| | ||| | ||||||||||||||||| ||||||| ||||||||||
Sbjct: 120 ctcgaggttcctctccctcgccatcttggacttctgagcgttgccgccgcccatgg 65
>gb|BM816259.1|BM816259 HC110D12_T3.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC110D12_T3.ab1 similar to hypothetical protein [Cicer
arietinum],unknown protein [Arabidopsis thaliana],, mRNA
sequence
Length = 894
Score = 143 bits (72), Expect = 9e-033
Identities = 195/236 (82%)
Strand = Plus / Minus
Query: 330 tcacttcttcagatgggggaagcactggtacacgtctgtcttgggatgcttggcctcggc 389
||||| ||| || ||||||||||||||| | ||| |||| |||||||| ||||||||
Sbjct: 299 tcactgcttgaggtgggggaagcactggacaaggtcgctcttcggatgcttcgcctcggc 240
Query: 390 gtgctcccggcacttcacttcagtcgtggtacacatgaatgtttgcatgcacactttgca 449
||||||| |||||| |||||| ||||| || ||||| || |||||||| | |||||
Sbjct: 239 gtgctccttgcactttgcttcagaggtggtgcagatgaaagtctgcatgcatatcttgca 180
Query: 450 ctggatgctcatggccttcttgttggtctcgagctggctccccttggcccccttgttctt 509
||||||| |||||||||||||||||| ||||||||||||||||||| | ||||| |||
Sbjct: 179 ctggatgttcatggccttcttgttggcctcgagctggctccccttgccgcccttcagctt 120
Query: 510 ctccaagttgcgctcgcgggccatcttggacttctggccgttgccaccgcccatgg 565
||| | ||| | ||| | ||||||||||||||||| ||||||| ||||||||||
Sbjct: 119 ctcgaggttcctctccctcgccatcttggacttctgagcgttgccgccgcccatgg 64
>gb|BM817391.1|BM817391 HC111G03_T3.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC111G03_T3.ab1 similar to hypothetical protein [Cicer
arietinum],unknown protein [Arabidopsis thaliana],, mRNA
sequence
Length = 912
Score = 143 bits (72), Expect = 9e-033
Identities = 195/236 (82%)
Strand = Plus / Minus
Query: 330 tcacttcttcagatgggggaagcactggtacacgtctgtcttgggatgcttggcctcggc 389
||||| ||| || ||||||||||||||| | ||| |||| |||||||| ||||||||
Sbjct: 308 tcactgcttgaggtgggggaagcactggacaaggtcgctcttcggatgcttcgcctcggc 249
Query: 390 gtgctcccggcacttcacttcagtcgtggtacacatgaatgtttgcatgcacactttgca 449
||||||| |||||| |||||| ||||| || ||||| || |||||||| | |||||
Sbjct: 248 gtgctccttgcactttgcttcagaggtggtgcagatgaaagtctgcatgcatatcttgca 189
Query: 450 ctggatgctcatggccttcttgttggtctcgagctggctccccttggcccccttgttctt 509
||||||| |||||||||||||||||| ||||||||||||||||||| | ||||| |||
Sbjct: 188 ctggatgttcatggccttcttgttggcctcgagctggctccccttgccgcccttcagctt 129
Query: 510 ctccaagttgcgctcgcgggccatcttggacttctggccgttgccaccgcccatgg 565
||| | ||| | ||| | ||||||||||||||||| ||||||| ||||||||||
Sbjct: 128 ctcgaggttcctctccctcgccatcttggacttctgagcgttgccgccgcccatgg 73
>gb|AJ462504.1|AJ462504 AJ462504 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200052D08F1, mRNA sequence
Length = 300
Score = 143 bits (72), Expect = 9e-033
Identities = 195/236 (82%)
Strand = Plus / Minus
Query: 330 tcacttcttcagatgggggaagcactggtacacgtctgtcttgggatgcttggcctcggc 389
||||| ||| || ||||||||||||||| | ||| |||| |||||||| ||||||||
Sbjct: 269 tcactgcttgaggtgggggaagcactggacaaggtcgctcttcggatgcttcgcctcggc 210
Query: 390 gtgctcccggcacttcacttcagtcgtggtacacatgaatgtttgcatgcacactttgca 449
||||||| |||||| |||||| ||||| || ||||| || |||||||| | |||||
Sbjct: 209 gtgctccttgcactttgcttcagaggtggtgcagatgaaagtctgcatgcatatcttgca 150
Query: 450 ctggatgctcatggccttcttgttggtctcgagctggctccccttggcccccttgttctt 509
||||||| |||||||||||||||||| ||||||||||||||||||| | ||||| |||
Sbjct: 149 ctggatgttcatggccttcttgttggcctcgagctggctccccttgccgcccttcagctt 90
Query: 510 ctccaagttgcgctcgcgggccatcttggacttctggccgttgccaccgcccatgg 565
||| | ||| | ||| | ||||||||||||||||| ||||||| ||||||||||
Sbjct: 89 ctcgaggttcctctccctcgccatcttggacttctgagcgttgccgccgcccatgg 34
>gb|AJ462505.1|AJ462505 AJ462505 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200059A06F1, mRNA sequence
Length = 300
Score = 143 bits (72), Expect = 9e-033
Identities = 195/236 (82%)
Strand = Plus / Minus
Query: 330 tcacttcttcagatgggggaagcactggtacacgtctgtcttgggatgcttggcctcggc 389
||||| ||| || ||||||||||||||| | ||| |||| |||||||| ||||||||
Sbjct: 270 tcactgcttgaggtgggggaagcactggacaaggtcgctcttcggatgcttcgcctcggc 211
Query: 390 gtgctcccggcacttcacttcagtcgtggtacacatgaatgtttgcatgcacactttgca 449
||||||| |||||| |||||| ||||| || ||||| || |||||||| | |||||
Sbjct: 210 gtgctccttgcactttgcttcagaggtggtgcagatgaaagtctgcatgcatatcttgca 151
Query: 450 ctggatgctcatggccttcttgttggtctcgagctggctccccttggcccccttgttctt 509
||||||| |||||||||||||||||| ||||||||||||||||||| | ||||| |||
Sbjct: 150 ctggatgttcatggccttcttgttggcctcgagctggctccccttgccgcccttcagctt 91
Query: 510 ctccaagttgcgctcgcgggccatcttggacttctggccgttgccaccgcccatgg 565
||| | ||| | ||| | ||||||||||||||||| ||||||| ||||||||||
Sbjct: 90 ctcgaggttcctctccctcgccatcttggacttctgagcgttgccgccgcccatgg 35
>gb|AJ462506.1|AJ462506 AJ462506 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200071F08F1, mRNA sequence
Length = 300
Score = 143 bits (72), Expect = 9e-033
Identities = 195/236 (82%)
Strand = Plus / Minus
Query: 330 tcacttcttcagatgggggaagcactggtacacgtctgtcttgggatgcttggcctcggc 389
||||| ||| || ||||||||||||||| | ||| |||| |||||||| ||||||||
Sbjct: 270 tcactgcttgaggtgggggaagcactggacaaggtcgctcttcggatgcttcgcctcggc 211
Query: 390 gtgctcccggcacttcacttcagtcgtggtacacatgaatgtttgcatgcacactttgca 449
||||||| |||||| |||||| ||||| || ||||| || |||||||| | |||||
Sbjct: 210 gtgctccttgcactttgcttcagaggtggtgcagatgaaagtctgcatgcatatcttgca 151
Query: 450 ctggatgctcatggccttcttgttggtctcgagctggctccccttggcccccttgttctt 509
||||||| |||||||||||||||||| ||||||||||||||||||| | ||||| |||
Sbjct: 150 ctggatgttcatggccttcttgttggcctcgagctggctccccttgccgcccttcagctt 91
Query: 510 ctccaagttgcgctcgcgggccatcttggacttctggccgttgccaccgcccatgg 565
||| | ||| | ||| | ||||||||||||||||| ||||||| ||||||||||
Sbjct: 90 ctcgaggttcctctccctcgccatcttggacttctgagcgttgccgccgcccatgg 35
>gb|BQ458766.1|BQ458766 HA04E18r HA Hordeum vulgare subsp. vulgare cDNA clone HA04E18
5-PRIME, mRNA sequence
Length = 490
Score = 143 bits (72), Expect = 9e-033
Identities = 195/236 (82%)
Strand = Plus / Minus
Query: 330 tcacttcttcagatgggggaagcactggtacacgtctgtcttgggatgcttggcctcggc 389
||||| ||| || ||||||||||||||| | ||| |||| |||||||| ||||||||
Sbjct: 263 tcactgcttgaggtgggggaagcactggacaaggtcgctcttcggatgcttcgcctcggc 204
Query: 390 gtgctcccggcacttcacttcagtcgtggtacacatgaatgtttgcatgcacactttgca 449
||||||| |||||| |||||| ||||| || ||||| || |||||||| | |||||
Sbjct: 203 gtgctccttgcactttgcttcagaggtggtgcagatgaaagtctgcatgcatatcttgca 144
Query: 450 ctggatgctcatggccttcttgttggtctcgagctggctccccttggcccccttgttctt 509
||||||| |||||||||||||||||| ||||||||||||||||||| | ||||| |||
Sbjct: 143 ctggatgttcatggccttcttgttggcctcgagctggctccccttgccgcccttcagctt 84
Query: 510 ctccaagttgcgctcgcgggccatcttggacttctggccgttgccaccgcccatgg 565
||| | ||| | ||| | ||||||||||||||||| ||||||| ||||||||||
Sbjct: 83 ctcgaggttcctctccctcgccatcttggacttctgagcgttgccgccgcccatgg 28
>gb|BQ459973.1|BQ459973 HA07J01r HA Hordeum vulgare subsp. vulgare cDNA clone HA07J01
5-PRIME, mRNA sequence
Length = 478
Score = 143 bits (72), Expect = 9e-033
Identities = 195/236 (82%)
Strand = Plus / Minus
Query: 330 tcacttcttcagatgggggaagcactggtacacgtctgtcttgggatgcttggcctcggc 389
||||| ||| || ||||||||||||||| | ||| |||| |||||||| ||||||||
Sbjct: 272 tcactgcttgaggtgggggaagcactggacaaggtcgctcttcggatgcttcgcctcggc 213
Query: 390 gtgctcccggcacttcacttcagtcgtggtacacatgaatgtttgcatgcacactttgca 449
||||||| |||||| |||||| ||||| || ||||| || |||||||| | |||||
Sbjct: 212 gtgctccttgcactttgcttcagaggtggtgcagatgaaagtctgcatgcatatcttgca 153
Query: 450 ctggatgctcatggccttcttgttggtctcgagctggctccccttggcccccttgttctt 509
||||||| |||||||||||||||||| ||||||||||||||||||| | ||||| |||
Sbjct: 152 ctggatgttcatggccttcttgttggcctcgagctggctccccttgccgcccttcagctt 93
Query: 510 ctccaagttgcgctcgcgggccatcttggacttctggccgttgccaccgcccatgg 565
||| | ||| | ||| | ||||||||||||||||| ||||||| ||||||||||
Sbjct: 92 ctcgaggttcctctccctcgccatcttggacttctgagcgttgccgccgcccatgg 37
>gb|BQ460828.1|BQ460828 HA05M18r HA Hordeum vulgare subsp. vulgare cDNA clone HA05M18
5-PRIME, mRNA sequence
Length = 482
Score = 143 bits (72), Expect = 9e-033
Identities = 195/236 (82%)
Strand = Plus / Minus
Query: 330 tcacttcttcagatgggggaagcactggtacacgtctgtcttgggatgcttggcctcggc 389
||||| ||| || ||||||||||||||| | ||| |||| |||||||| ||||||||
Sbjct: 291 tcactgcttgaggtgggggaagcactggacaaggtcgctcttcggatgcttcgcctcggc 232
Query: 390 gtgctcccggcacttcacttcagtcgtggtacacatgaatgtttgcatgcacactttgca 449
||||||| |||||| |||||| ||||| || ||||| || |||||||| | |||||
Sbjct: 231 gtgctccttgcactttgcttcagaggtggtgcagatgaaagtctgcatgcatatcttgca 172
Query: 450 ctggatgctcatggccttcttgttggtctcgagctggctccccttggcccccttgttctt 509
||||||| |||||||||||||||||| ||||||||||||||||||| | ||||| |||
Sbjct: 171 ctggatgttcatggccttcttgttggcctcgagctggctccccttgccgcccttcagctt 112
Query: 510 ctccaagttgcgctcgcgggccatcttggacttctggccgttgccaccgcccatgg 565
||| | ||| | ||| | ||||||||||||||||| ||||||| ||||||||||
Sbjct: 111 ctcgaggttcctctccctcgccatcttggacttctgagcgttgccgccgcccatgg 56
>gb|BQ463755.1|BQ463755 HG01F11r HG Hordeum vulgare subsp. vulgare cDNA clone HG01F11
5-PRIME, mRNA sequence
Length = 474
Score = 143 bits (72), Expect = 9e-033
Identities = 195/236 (82%)
Strand = Plus / Minus
Query: 330 tcacttcttcagatgggggaagcactggtacacgtctgtcttgggatgcttggcctcggc 389
||||| ||| || ||||||||||||||| | ||| |||| |||||||| ||||||||
Sbjct: 258 tcactgcttgaggtgggggaagcactggacaaggtcgctcttcggatgcttcgcctcggc 199
Query: 390 gtgctcccggcacttcacttcagtcgtggtacacatgaatgtttgcatgcacactttgca 449
||||||| |||||| |||||| ||||| || ||||| || |||||||| | |||||
Sbjct: 198 gtgctccttgcactttgcttcagaggtggtgcagatgaaagtctgcatgcatatcttgca 139
Query: 450 ctggatgctcatggccttcttgttggtctcgagctggctccccttggcccccttgttctt 509
||||||| |||||||||||||||||| ||||||||||||||||||| | ||||| |||
Sbjct: 138 ctggatgttcatggccttcttgttggcctcgagctggctccccttgccgcccttcagctt 79
Query: 510 ctccaagttgcgctcgcgggccatcttggacttctggccgttgccaccgcccatgg 565
||| | ||| | ||| | ||||||||||||||||| ||||||| ||||||||||
Sbjct: 78 ctcgaggttcctctccctcgccatcttggacttctgagcgttgccgccgcccatgg 23
>gb|BQ464468.1|BQ464468 HF02F23r HF Hordeum vulgare subsp. vulgare cDNA clone HF02F23
5-PRIME, mRNA sequence
Length = 528
Score = 143 bits (72), Expect = 9e-033
Identities = 195/236 (82%)
Strand = Plus / Minus
Query: 330 tcacttcttcagatgggggaagcactggtacacgtctgtcttgggatgcttggcctcggc 389
||||| ||| || ||||||||||||||| | ||| |||| |||||||| ||||||||
Sbjct: 277 tcactgcttgaggtgggggaagcactggacaaggtcgctcttcggatgcttcgcctcggc 218
Query: 390 gtgctcccggcacttcacttcagtcgtggtacacatgaatgtttgcatgcacactttgca 449
||||||| |||||| |||||| ||||| || ||||| || |||||||| | |||||
Sbjct: 217 gtgctccttgcactttgcttcagaggtggtgcagatgaaagtctgcatgcatatcttgca 158
Query: 450 ctggatgctcatggccttcttgttggtctcgagctggctccccttggcccccttgttctt 509
||||||| |||||||||||||||||| ||||||||||||||||||| | ||||| |||
Sbjct: 157 ctggatgttcatggccttcttgttggcctcgagctggctccccttgccgcccttcagctt 98
Query: 510 ctccaagttgcgctcgcgggccatcttggacttctggccgttgccaccgcccatgg 565
||| | ||| | ||| | ||||||||||||||||| ||||||| ||||||||||
Sbjct: 97 ctcgaggttcctctccctcgccatcttggacttctgagcgttgccgccgcccatgg 42
>gb|BQ467331.1|BQ467331 HS03G21r HS Hordeum vulgare subsp. vulgare cDNA clone HS03G21
5-PRIME, mRNA sequence
Length = 502
Score = 143 bits (72), Expect = 9e-033
Identities = 195/236 (82%)
Strand = Plus / Minus
Query: 330 tcacttcttcagatgggggaagcactggtacacgtctgtcttgggatgcttggcctcggc 389
||||| ||| || ||||||||||||||| | ||| |||| |||||||| ||||||||
Sbjct: 283 tcactgcttgaggtgggggaagcactggacaaggtcgctcttcggatgcttcgcctcggc 224
Query: 390 gtgctcccggcacttcacttcagtcgtggtacacatgaatgtttgcatgcacactttgca 449
||||||| |||||| |||||| ||||| || ||||| || |||||||| | |||||
Sbjct: 223 gtgctccttgcactttgcttcagaggtggtgcagatgaaagtctgcatgcatatcttgca 164
Query: 450 ctggatgctcatggccttcttgttggtctcgagctggctccccttggcccccttgttctt 509
||||||| |||||||||||||||||| ||||||||||||||||||| | ||||| |||
Sbjct: 163 ctggatgttcatggccttcttgttggcctcgagctggctccccttgccgcccttcagctt 104
Query: 510 ctccaagttgcgctcgcgggccatcttggacttctggccgttgccaccgcccatgg 565
||| | ||| | ||| | ||||||||||||||||| ||||||| ||||||||||
Sbjct: 103 ctcgaggttcctctccctcgccatcttggacttctgagcgttgccgccgcccatgg 48
>gb|BQ469224.1|BQ469224 HM03M08r HM Hordeum vulgare subsp. vulgare cDNA clone HM03M08
5-PRIME, mRNA sequence
Length = 447
Score = 143 bits (72), Expect = 9e-033
Identities = 195/236 (82%)
Strand = Plus / Minus
Query: 330 tcacttcttcagatgggggaagcactggtacacgtctgtcttgggatgcttggcctcggc 389
||||| ||| || ||||||||||||||| | ||| |||| |||||||| ||||||||
Sbjct: 269 tcactgcttgaggtgggggaagcactggacaaggtcgctcttcggatgcttcgcctcggc 210
Query: 390 gtgctcccggcacttcacttcagtcgtggtacacatgaatgtttgcatgcacactttgca 449
||||||| |||||| |||||| ||||| || ||||| || |||||||| | |||||
Sbjct: 209 gtgctccttgcactttgcttcagaggtggtgcagatgaaagtctgcatgcatatcttgca 150
Query: 450 ctggatgctcatggccttcttgttggtctcgagctggctccccttggcccccttgttctt 509
||||||| |||||||||||||||||| ||||||||||||||||||| | ||||| |||
Sbjct: 149 ctggatgttcatggccttcttgttggcctcgagctggctccccttgccgcccttcagctt 90
Query: 510 ctccaagttgcgctcgcgggccatcttggacttctggccgttgccaccgcccatgg 565
||| | ||| | ||| | ||||||||||||||||| ||||||| ||||||||||
Sbjct: 89 ctcgaggttcctctccctcgccatcttggacttctgagcgttgccgccgcccatgg 34
>gb|BQ469662.1|BQ469662 HZ01H20r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ01H20
5-PRIME, mRNA sequence
Length = 438
Score = 143 bits (72), Expect = 9e-033
Identities = 195/236 (82%)
Strand = Plus / Minus
Query: 330 tcacttcttcagatgggggaagcactggtacacgtctgtcttgggatgcttggcctcggc 389
||||| ||| || ||||||||||||||| | ||| |||| |||||||| ||||||||
Sbjct: 297 tcactgcttgaggtgggggaagcactggacaaggtcgctcttcggatgcttcgcctcggc 238
Query: 390 gtgctcccggcacttcacttcagtcgtggtacacatgaatgtttgcatgcacactttgca 449
||||||| |||||| |||||| ||||| || ||||| || |||||||| | |||||
Sbjct: 237 gtgctccttgcactttgcttcagaggtggtgcagatgaaagtctgcatgcatatcttgca 178
Query: 450 ctggatgctcatggccttcttgttggtctcgagctggctccccttggcccccttgttctt 509
||||||| |||||||||||||||||| ||||||||||||||||||| | ||||| |||
Sbjct: 177 ctggatgttcatggccttcttgttggcctcgagctggctccccttgccgcccttcagctt 118
Query: 510 ctccaagttgcgctcgcgggccatcttggacttctggccgttgccaccgcccatgg 565
||| | ||| | ||| | ||||||||||||||||| ||||||| ||||||||||
Sbjct: 117 ctcgaggttcctctccctcgccatcttggacttctgagcgttgccgccgcccatgg 62
>gb|BQ661491.1|BQ661491 HM03M08u HM Hordeum vulgare subsp. vulgare cDNA clone HM03M08
3-PRIME, mRNA sequence
Length = 447
Score = 143 bits (72), Expect = 9e-033
Identities = 195/236 (82%)
Strand = Plus / Plus
Query: 330 tcacttcttcagatgggggaagcactggtacacgtctgtcttgggatgcttggcctcggc 389
||||| ||| || ||||||||||||||| | ||| |||| |||||||| ||||||||
Sbjct: 179 tcactgcttgaggtgggggaagcactggacaaggtcgctcttcggatgcttcgcctcggc 238
Query: 390 gtgctcccggcacttcacttcagtcgtggtacacatgaatgtttgcatgcacactttgca 449
||||||| |||||| |||||| ||||| || ||||| || |||||||| | |||||
Sbjct: 239 gtgctccttgcactttgcttcagaggtggtgcagatgaaagtctgcatgcatatcttgca 298
Query: 450 ctggatgctcatggccttcttgttggtctcgagctggctccccttggcccccttgttctt 509
||||||| |||||||||||||||||| ||||||||||||||||||| | ||||| |||
Sbjct: 299 ctggatgttcatggccttcttgttggcctcgagctggctccccttgccgcccttcagctt 358
Query: 510 ctccaagttgcgctcgcgggccatcttggacttctggccgttgccaccgcccatgg 565
||| | ||| | ||| | ||||||||||||||||| ||||||| ||||||||||
Sbjct: 359 ctcgaggttcctctccctcgccatcttggacttctgagcgttgccgccgcccatgg 414
>gb|BM375459.2|BM375459 EBem06_SQ003_G17_R embryo, 21 DPA, no treatment, cv Optic, EBem06
Hordeum vulgare subsp. vulgare cDNA clone
EBem06_SQ003_G17 5', mRNA sequence
Length = 468
Score = 143 bits (72), Expect = 9e-033
Identities = 195/236 (82%)
Strand = Plus / Minus
Query: 330 tcacttcttcagatgggggaagcactggtacacgtctgtcttgggatgcttggcctcggc 389
||||| ||| || ||||||||||||||| | ||| |||| |||||||| ||||||||
Sbjct: 281 tcactgcttgaggtgggggaagcactggacaaggtcgctcttcggatgcttcgcctcggc 222
Query: 390 gtgctcccggcacttcacttcagtcgtggtacacatgaatgtttgcatgcacactttgca 449
||||||| |||||| |||||| ||||| || ||||| || |||||||| | |||||
Sbjct: 221 gtgctccttgcactttgcttcagaggtggtgcagatgaaagtctgcatgcatatcttgca 162
Query: 450 ctggatgctcatggccttcttgttggtctcgagctggctccccttggcccccttgttctt 509
||||||| |||||||||||||||||| ||||||||||||||||||| | ||||| |||
Sbjct: 161 ctggatgttcatggccttcttgttggcctcgagctggctccccttgccgcccttcagctt 102
Query: 510 ctccaagttgcgctcgcgggccatcttggacttctggccgttgccaccgcccatgg 565
||| | ||| | ||| | ||||||||||||||||| ||||||| ||||||||||
Sbjct: 101 ctcgaggttcctctccctcgccatcttggacttctgagcgttgccgccgcccatgg 46
>gb|BI780668.2|BI780668 EBes01_SQ001_L08_R embryo sac, 4-6 DPA, no treatment, cv Optic,
EBes01 Hordeum vulgare subsp. vulgare cDNA clone
EBes01_SQ001_L08 5', mRNA sequence
Length = 452
Score = 143 bits (72), Expect = 9e-033
Identities = 195/236 (82%)
Strand = Plus / Minus
Query: 330 tcacttcttcagatgggggaagcactggtacacgtctgtcttgggatgcttggcctcggc 389
||||| ||| || ||||||||||||||| | ||| |||| |||||||| ||||||||
Sbjct: 274 tcactgcttgaggtgggggaagcactggacaaggtcgctcttcggatgcttcgcctcggc 215
Query: 390 gtgctcccggcacttcacttcagtcgtggtacacatgaatgtttgcatgcacactttgca 449
||||||| |||||| |||||| ||||| || ||||| || |||||||| | |||||
Sbjct: 214 gtgctccttgcactttgcttcagaggtggtgcagatgaaagtctgcatgcatatcttgca 155
Query: 450 ctggatgctcatggccttcttgttggtctcgagctggctccccttggcccccttgttctt 509
||||||| |||||||||||||||||| ||||||||||||||||||| | ||||| |||
Sbjct: 154 ctggatgttcatggccttcttgttggcctcgagctggctccccttgccgcccttcagctt 95
Query: 510 ctccaagttgcgctcgcgggccatcttggacttctggccgttgccaccgcccatgg 565
||| | ||| | ||| | ||||||||||||||||| ||||||| ||||||||||
Sbjct: 94 ctcgaggttcctctccctcgccatcttggacttctgagcgttgccgccgcccatgg 39
>gb|BM099747.2|BM099747 EBes01_SQ004_C16_R embryo sac, 4-6 DPA, no treatment, cv Optic,
EBes01 Hordeum vulgare subsp. vulgare cDNA clone
EBes01_SQ004_C16 5', mRNA sequence
Length = 483
Score = 143 bits (72), Expect = 9e-033
Identities = 195/236 (82%)
Strand = Plus / Minus
Query: 330 tcacttcttcagatgggggaagcactggtacacgtctgtcttgggatgcttggcctcggc 389
||||| ||| || ||||||||||||||| | ||| |||| |||||||| ||||||||
Sbjct: 274 tcactgcttgaggtgggggaagcactggacaaggtcgctcttcggatgcttcgcctcggc 215
Query: 390 gtgctcccggcacttcacttcagtcgtggtacacatgaatgtttgcatgcacactttgca 449
||||||| |||||| |||||| ||||| || ||||| || |||||||| | |||||
Sbjct: 214 gtgctccttgcactttgcttcagaggtggtgcagatgaaagtctgcatgcatatcttgca 155
Query: 450 ctggatgctcatggccttcttgttggtctcgagctggctccccttggcccccttgttctt 509
||||||| |||||||||||||||||| ||||||||||||||||||| | ||||| |||
Sbjct: 154 ctggatgttcatggccttcttgttggcctcgagctggctccccttgccgcccttcagctt 95
Query: 510 ctccaagttgcgctcgcgggccatcttggacttctggccgttgccaccgcccatgg 565
||| | ||| | ||| | ||||||||||||||||| ||||||| ||||||||||
Sbjct: 94 ctcgaggttcctctccctcgccatcttggacttctgagcgttgccgccgcccatgg 39
>gb|BM099768.2|BM099768 EBes01_SQ004_D14_R embryo sac, 4-6 DPA, no treatment, cv Optic,
EBes01 Hordeum vulgare subsp. vulgare cDNA clone
EBes01_SQ004_D14 5', mRNA sequence
Length = 498
Score = 143 bits (72), Expect = 9e-033
Identities = 195/236 (82%)
Strand = Plus / Minus
Query: 330 tcacttcttcagatgggggaagcactggtacacgtctgtcttgggatgcttggcctcggc 389
||||| ||| || ||||||||||||||| | ||| |||| |||||||| ||||||||
Sbjct: 274 tcactgcttgaggtgggggaagcactggacaaggtcgctcttcggatgcttcgcctcggc 215
Query: 390 gtgctcccggcacttcacttcagtcgtggtacacatgaatgtttgcatgcacactttgca 449
||||||| |||||| |||||| ||||| || ||||| || |||||||| | |||||
Sbjct: 214 gtgctccttgcactttgcttcagaggtggtgcagatgaaagtctgcatgcatatcttgca 155
Query: 450 ctggatgctcatggccttcttgttggtctcgagctggctccccttggcccccttgttctt 509
||||||| |||||||||||||||||| ||||||||||||||||||| | ||||| |||
Sbjct: 154 ctggatgttcatggccttcttgttggcctcgagctggctccccttgccgcccttcagctt 95
Query: 510 ctccaagttgcgctcgcgggccatcttggacttctggccgttgccaccgcccatgg 565
||| | ||| | ||| | ||||||||||||||||| ||||||| ||||||||||
Sbjct: 94 ctcgaggttcctctccctcgccatcttggacttctgagcgttgccgccgcccatgg 39
>gb|BI781188.2|BI781188 EBma03_SQ001_L10_R maternal, 8 DPA, no treatment, cv Optic, EBma03
Hordeum vulgare subsp. vulgare cDNA clone
EBma03_SQ001_L10 5', mRNA sequence
Length = 389
Score = 143 bits (72), Expect = 9e-033
Identities = 195/236 (82%)
Strand = Plus / Minus
Query: 330 tcacttcttcagatgggggaagcactggtacacgtctgtcttgggatgcttggcctcggc 389
||||| ||| || ||||||||||||||| | ||| |||| |||||||| ||||||||
Sbjct: 264 tcactgcttgaggtgggggaagcactggacaaggtcgctcttcggatgcttcgcctcggc 205
Query: 390 gtgctcccggcacttcacttcagtcgtggtacacatgaatgtttgcatgcacactttgca 449
||||||| |||||| |||||| ||||| || ||||| || |||||||| | |||||
Sbjct: 204 gtgctccttgcactttgcttcagaggtggtgcagatgaaagtctgcatgcatatcttgca 145
Query: 450 ctggatgctcatggccttcttgttggtctcgagctggctccccttggcccccttgttctt 509
||||||| |||||||||||||||||| ||||||||||||||||||| | ||||| |||
Sbjct: 144 ctggatgttcatggccttcttgttggcctcgagctggctccccttgccgcccttcagctt 85
Query: 510 ctccaagttgcgctcgcgggccatcttggacttctggccgttgccaccgcccatgg 565
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Sbjct: 84 ctcgaggttcctctccctcgccatcttggacttctgagcgttgccgccgcccatgg 29
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 73,205
Number of Sequences: 312970
Number of extensions: 73205
Number of successful extensions: 21100
Number of sequences better than 0.5: 175
Number of HSP's better than 0.5 without gapping: 174
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 20614
Number of HSP's gapped (non-prelim): 184
length of query: 708
length of database: 175,134,539
effective HSP length: 19
effective length of query: 689
effective length of database: 169,188,109
effective search space: 116570607101
effective search space used: 116570607101
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)