BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.707
(919 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BI947504.1|BI947504 HVSMEl0005L08f Hordeum vulgare spike... 333 6e-090
gb|BF263745.3|BF263745 HV_CEa0007I20f Hordeum vulgare seedl... 333 6e-090
gb|AV916786.1|AV916786 AV916786 K. Sato unpublished cDNA li... 333 6e-090
gb|BQ458499.1|BQ458499 HA05A22r HA Hordeum vulgare subsp. v... 333 6e-090
gb|BQ460364.1|BQ460364 HA09O16r HA Hordeum vulgare subsp. v... 333 6e-090
gb|BQ460503.1|BQ460503 HA09G03r HA Hordeum vulgare subsp. v... 333 6e-090
gb|BQ470988.1|BQ470988 HX04K05r HX Hordeum vulgare subsp. v... 333 6e-090
gb|BM376771.2|BM376771 EBem05_SQ003_D01_R embryo, 14 DPA, n... 333 6e-090
gb|BM369548.2|BM369548 EBem07_SQ003_O19_R embryo, 28 DPA, n... 333 6e-090
gb|BM368848.2|BM368848 EBem08_SQ004_M09_R embryo, 40 DPA, n... 333 6e-090
gb|BM376181.2|BM376181 EBma01_SQ002_J11_R maternal, 4 DPA, ... 333 6e-090
gb|BM372228.2|BM372228 EBro03_SQ004_G02_R root, 3 week, wat... 333 6e-090
gb|BQ760071.1|BQ760071 EBpi07_SQ003_J01_R pistil, 12 DPA, n... 333 6e-090
gb|BQ764827.1|BQ764827 EBca01_SQ005_C05_R carpel, pre-anthe... 333 6e-090
gb|BQ768464.1|BQ768464 EBro08_SQ011_E19_R root, 3 week, dro... 333 6e-090
gb|BQ768604.1|BQ768604 EBro08_SQ012_M03_R root, 3 week, dro... 333 6e-090
gb|BU968883.1|BU968883 HB08O03r BC Hordeum vulgare subsp. v... 333 6e-090
gb|BU981711.1|BU981711 HA24G15r HA Hordeum vulgare subsp. v... 333 6e-090
gb|BU983978.1|BU983978 HA31J22r HA Hordeum vulgare subsp. v... 333 6e-090
gb|BU988528.1|BU988528 HF17O10r HF Hordeum vulgare subsp. v... 333 6e-090
gb|BU988657.1|BU988657 HF18F03r HF Hordeum vulgare subsp. v... 333 6e-090
gb|BU988764.1|BU988764 HF18K08r HF Hordeum vulgare subsp. v... 333 6e-090
gb|BU990202.1|BU990202 HF24G03r HF Hordeum vulgare subsp. v... 333 6e-090
gb|CA024600.1|CA024600 HZ49M08r HZ Hordeum vulgare subsp. v... 333 6e-090
gb|CV056251.1|CV056251 BNEL15F3 Barley EST endosperm librar... 333 6e-090
gb|CV057878.1|CV057878 BNEL31g9 Barley EST endosperm librar... 333 6e-090
gb|CV061292.1|CV061292 BNEL67b3 Barley EST endosperm librar... 333 6e-090
gb|CV064057.1|CV064057 BNEL96h4 Barley EST endosperm librar... 333 6e-090
gb|CK122869.1|CK122869 BES1824106g21 BES1824 Hordeum vulgar... 333 6e-090
gb|CK124871.1|CK124871 BES1824110k21 BES1824 Hordeum vulgar... 333 6e-090
gb|CK125547.1|CK125547 BES1824109a09 BES1824 Hordeum vulgar... 333 6e-090
gb|CK125663.1|CK125663 BES1824109k10 BES1824 Hordeum vulgar... 333 6e-090
gb|AL503478.1|AL503478 AL503478 Hordeum vulgare Barke roots... 327 4e-088
gb|AL505202.1|AL505202 AL505202 Hordeum vulgare Barke roots... 327 4e-088
gb|BF622318.3|BF622318 HVSMEa0002M02f Hordeum vulgare seedl... 327 4e-088
gb|BF630149.2|BF630149 HVSMEb0008C02f Hordeum vulgare seedl... 327 4e-088
gb|BG343037.2|BG343037 HVSMEg0001N01f Hordeum vulgare pre-a... 327 4e-088
gb|AV915254.1|AV915254 AV915254 K. Sato unpublished cDNA li... 327 4e-088
gb|AV915379.1|AV915379 AV915379 K. Sato unpublished cDNA li... 327 4e-088
gb|AV917234.1|AV917234 AV917234 K. Sato unpublished cDNA li... 327 4e-088
gb|AV920467.1|AV920467 AV920467 K. Sato unpublished cDNA li... 327 4e-088
gb|AV922400.1|AV922400 AV922400 K. Sato unpublished cDNA li... 327 4e-088
gb|AJ460819.1|AJ460819 AJ460819 S00002 Hordeum vulgare subs... 327 4e-088
gb|BJ464294.1|BJ464294 BJ464294 K. Sato unpublished cDNA li... 327 4e-088
gb|BJ465076.1|BJ465076 BJ465076 K. Sato unpublished cDNA li... 327 4e-088
gb|BJ468185.1|BJ468185 BJ468185 K. Sato unpublished cDNA li... 327 4e-088
gb|BQ459854.1|BQ459854 HA07O12r HA Hordeum vulgare subsp. v... 327 4e-088
gb|BQ460437.1|BQ460437 HA09K01r HA Hordeum vulgare subsp. v... 327 4e-088
gb|BQ462955.1|BQ462955 HI02I20r HI Hordeum vulgare subsp. v... 327 4e-088
gb|BQ464640.1|BQ464640 HF02N13r HF Hordeum vulgare subsp. v... 327 4e-088
gb|BQ464670.1|BQ464670 HF02O22r HF Hordeum vulgare subsp. v... 327 4e-088
gb|BQ464877.1|BQ464877 HU02A07r HU Hordeum vulgare subsp. v... 327 4e-088
gb|BQ472033.1|BQ472033 HV04D12r HV Hordeum vulgare subsp. v... 327 4e-088
gb|BM377623.2|BM377623 EBem04_SQ003_L03_R embryo, 12 DPA, n... 327 4e-088
gb|BM375326.2|BM375326 EBem06_SQ003_A03_R embryo, 21 DPA, n... 327 4e-088
gb|BM370369.2|BM370369 EBro08_SQ004_A02_R root, 3 week, dro... 327 4e-088
gb|BQ754140.1|BQ754140 EBca01_SQ002_P11_R carpel, pre-anthe... 327 4e-088
gb|BQ756722.1|BQ756722 EBem09_SQ003_J04_R embryo, 1 Day ger... 327 4e-088
gb|BQ759287.1|BQ759287 EBpi01_SQ004_G03_R pistil, 1 DPA, no... 327 4e-088
gb|BQ763841.1|BQ763841 EBro03_SQ005_F14_R root, 3 week, wat... 327 4e-088
gb|BQ765568.1|BQ765568 EBro03_SQ007_E18_R root, 3 week, wat... 327 4e-088
gb|BQ768702.1|BQ768702 EBro08_SQ012_O07_R root, 3 week, dro... 327 4e-088
gb|BU972964.1|BU972964 HB23E24r BC Hordeum vulgare subsp. v... 327 4e-088
gb|BU981690.1|BU981690 HA24F15r HA Hordeum vulgare subsp. v... 327 4e-088
gb|BU986782.1|BU986782 HF12O03r HF Hordeum vulgare subsp. v... 327 4e-088
gb|BU997207.1|BU997207 HI07E02r HI Hordeum vulgare subsp. v... 327 4e-088
gb|BU998480.1|BU998480 HI11D05r HI Hordeum vulgare subsp. v... 327 4e-088
gb|BU998716.1|BU998716 HI11P08r HI Hordeum vulgare subsp. v... 327 4e-088
gb|CA024815.1|CA024815 HZ50G05r HZ Hordeum vulgare subsp. v... 327 4e-088
gb|CA025351.1|CA025351 HZ51O17r HZ Hordeum vulgare subsp. v... 327 4e-088
gb|CA030983.1|CA030983 HX08L01r HX Hordeum vulgare subsp. v... 327 4e-088
gb|CA032252.1|CA032252 HX12H15r HX Hordeum vulgare subsp. v... 327 4e-088
gb|CA032671.1|CA032671 HX13N15r HX Hordeum vulgare subsp. v... 327 4e-088
gb|CA033025.1|CA033025 HX14O09r HX Hordeum vulgare subsp. v... 327 4e-088
gb|CB859400.1|CB859400 HI10F12w HI Hordeum vulgare subsp. v... 327 4e-088
gb|CD663328.1|CD663328 UCRHV18_05af01_b1 Drought-stressed D... 327 4e-088
gb|CV053500.1|CV053500 BNEL100a11 Barley EST endosperm libr... 327 4e-088
gb|CV056511.1|CV056511 BNEL18E9 Barley EST endosperm librar... 327 4e-088
gb|CV058152.1|CV058152 BNEL34h4 Barley EST endosperm librar... 327 4e-088
gb|CV059167.1|CV059167 BNEL45b12 Barley EST endosperm libra... 327 4e-088
gb|CK123164.1|CK123164 BES1824102f04 BES1824 Hordeum vulgar... 327 4e-088
gb|CK123501.1|CK123501 BES1824104d16 BES1824 Hordeum vulgar... 327 4e-088
gb|CK124476.1|CK124476 BES1824109f02 BES1824 Hordeum vulgar... 327 4e-088
gb|CK125509.1|CK125509 BES1824108n02 BES1824 Hordeum vulgar... 327 4e-088
gb|CK125596.1|CK125596 BES1824109c13 BES1824 Hordeum vulgar... 327 4e-088
gb|BF622691.2|BF622691 HVSMEa0007O05f Hordeum vulgare seedl... 325 1e-087
gb|BG418184.2|BG418184 HVSMEk0021M15f Hordeum vulgare testa... 325 1e-087
gb|BJ448795.1|BJ448795 BJ448795 K. Sato unpublished cDNA li... 325 1e-087
gb|BJ461931.1|BJ461931 BJ461931 K. Sato unpublished cDNA li... 325 1e-087
gb|BF630633.2|BF630633 HVSMEb0012G16f Hordeum vulgare seedl... 323 6e-087
gb|BJ466227.1|BJ466227 BJ466227 K. Sato unpublished cDNA li... 323 6e-087
gb|BM377572.2|BM377572 EBem04_SQ003_I19_R embryo, 12 DPA, n... 323 6e-087
gb|BI780201.2|BI780201 EBma08_SQ001_L02_R maternal, 28 DPA,... 323 6e-087
gb|BI777934.2|BI777934 EBro07_SQ001_G05_R root, 3 week, red... 323 6e-087
gb|AV913593.1|AV913593 AV913593 K. Sato unpublished cDNA li... 321 2e-086
gb|CA024430.1|CA024430 HZ49E17r HZ Hordeum vulgare subsp. v... 321 2e-086
gb|BJ450451.1|BJ450451 BJ450451 K. Sato unpublished cDNA li... 319 9e-086
gb|BJ466736.1|BJ466736 BJ466736 K. Sato unpublished cDNA li... 319 9e-086
gb|BQ460520.1|BQ460520 HA09D24r HA Hordeum vulgare subsp. v... 319 9e-086
gb|BQ765732.1|BQ765732 EBro03_SQ008_C04_R root, 3 week, wat... 319 9e-086
gb|CV058173.1|CV058173 BNEL35b2 Barley EST endosperm librar... 319 9e-086
gb|CK122606.1|CK122606 BES1824104j19 BES1824 Hordeum vulgar... 319 9e-086
gb|BU990354.1|BU990354 HF24M15r HF Hordeum vulgare subsp. v... 317 4e-085
gb|BM377930.2|BM377930 EBem04_SQ004_K02_R embryo, 12 DPA, n... 315 1e-084
gb|CK125918.1|CK125918 BES1824111B1g10 BES1824 Hordeum vulg... 315 1e-084
gb|BQ762839.1|BQ762839 EBro02_SQ006_C11_R root, 3 week, hyd... 313 6e-084
gb|CK124279.1|CK124279 BES1824108d22 BES1824 Hordeum vulgar... 313 6e-084
gb|BE603260.3|BE603260 HVSMEh0102N08f Hordeum vulgare 5-45 ... 311 2e-083
gb|AJ460822.1|AJ460822 AJ460822 S00002 Hordeum vulgare subs... 311 2e-083
gb|BQ665195.1|BQ665195 HX02I03u HX Hordeum vulgare subsp. v... 311 2e-083
gb|CV061565.1|CV061565 BNEL6D3 Barley EST endosperm library... 311 2e-083
gb|BI950470.1|BI950470 HVSMEl0020N16f Hordeum vulgare spike... 309 9e-083
gb|BG417421.2|BG417421 HVSMEk0017E07f Hordeum vulgare testa... 309 9e-083
gb|BQ768465.1|BQ768465 EBro08_SQ011_E20_R root, 3 week, dro... 309 9e-083
gb|BM443737.2|BM443737 EBem09_SQ001_F10_R embryo, 1 Day ger... 307 3e-082
gb|CB875835.1|CB875835 HX09H19w HX Hordeum vulgare subsp. v... 303 5e-081
gb|BF621942.2|BF621942 HVSMEa0001F14f Hordeum vulgare seedl... 301 2e-080
gb|BJ460221.1|BJ460221 BJ460221 K. Sato unpublished cDNA li... 301 2e-080
gb|AV918895.1|AV918895 AV918895 K. Sato unpublished cDNA li... 299 8e-080
gb|AV922083.1|AV922083 AV922083 K. Sato unpublished cDNA li... 299 8e-080
gb|CA022578.1|CA022578 HZ43K24r HZ Hordeum vulgare subsp. v... 299 8e-080
gb|BM441169.2|BM441169 EBed02_SQ002_K01_R endosperm, 8 DPA,... 297 3e-079
gb|BQ657042.1|BQ657042 HA09O16u HA Hordeum vulgare subsp. v... 293 5e-078
gb|BQ665669.1|BQ665669 HX04K05u HX Hordeum vulgare subsp. v... 293 5e-078
gb|BI776258.2|BI776258 EBem04_SQ001_E01_R embryo, 12 DPA, n... 293 5e-078
gb|BU999985.1|BU999985 HS16H05u HS Hordeum vulgare subsp. v... 293 5e-078
gb|BI947404.1|BI947404 HVSMEl0005G01f Hordeum vulgare spike... 289 8e-077
gb|BQ657178.1|BQ657178 HA09G03u HA Hordeum vulgare subsp. v... 289 8e-077
gb|CA025982.1|CA025982 HZ53L16r HZ Hordeum vulgare subsp. v... 289 8e-077
gb|BI948265.1|BI948265 HVSMEl0008M19f Hordeum vulgare spike... 287 3e-076
gb|BE454148.2|BE454148 HVSMEh0093A06f Hordeum vulgare 5-45 ... 287 3e-076
gb|BQ664657.1|BQ664657 HV04D12u HV Hordeum vulgare subsp. v... 285 1e-075
gb|BI779839.2|BI779839 EBem07_SQ001_C19_R embryo, 28 DPA, n... 283 5e-075
gb|BQ756838.1|BQ756838 EBem09_SQ003_O14_R embryo, 1 Day ger... 283 5e-075
gb|AV928447.1|AV928447 AV928447 K. Sato unpublished cDNA li... 281 2e-074
gb|BU983034.1|BU983034 HA28F17r HA Hordeum vulgare subsp. v... 280 8e-074
gb|BF258438.2|BF258438 HVSMEf0015L15f Hordeum vulgare seedl... 278 3e-073
gb|CA000463.1|CA000463 HS08E13u HS Hordeum vulgare subsp. v... 278 3e-073
gb|AJ460821.1|AJ460821 AJ460821 S00002 Hordeum vulgare subs... 274 5e-072
gb|BF263744.2|BF263744 HV_CEa0007I19f Hordeum vulgare seedl... 272 2e-071
gb|BJ463961.1|BJ463961 BJ463961 K. Sato unpublished cDNA li... 272 2e-071
gb|AJ460816.1|AJ460816 AJ460816 S00002 Hordeum vulgare subs... 270 8e-071
gb|AJ460820.1|AJ460820 AJ460820 S00002 Hordeum vulgare subs... 268 3e-070
gb|BQ664931.1|BQ664931 HX01H05w HX Hordeum vulgare subsp. v... 264 5e-069
gb|BM097625.2|BM097625 EBem04_SQ002_E01_R embryo, 12 DPA, n... 264 5e-069
gb|BU986373.1|BU986373 HF11K01r HF Hordeum vulgare subsp. v... 258 3e-067
gb|BM098910.2|BM098910 EBpi05_SQ002_G14_R pistil, 8 DPA, no... 254 4e-066
gb|BM369597.2|BM369597 EBem07_SQ004_B09_R embryo, 28 DPA, n... 252 2e-065
gb|BI776367.2|BI776367 EBpi05_SQ001_A03_R pistil, 8 DPA, no... 252 2e-065
gb|BQ767678.1|BQ767678 EBro08_SQ009_F13_R root, 3 week, dro... 252 2e-065
gb|BU976534.1|BU976534 HA03N22r HA Hordeum vulgare subsp. v... 252 2e-065
gb|BU978380.1|BU978380 HA13B01r HA Hordeum vulgare subsp. v... 252 2e-065
gb|BU979803.1|BU979803 HA17G05r HA Hordeum vulgare subsp. v... 252 2e-065
gb|CA027672.1|CA027672 HZ59K16r HZ Hordeum vulgare subsp. v... 252 2e-065
gb|CB875564.1|CB875564 HX08L01w HX Hordeum vulgare subsp. v... 248 3e-064
gb|CV062427.1|CV062427 BNEL79h6 Barley EST endosperm librar... 246 1e-063
gb|AL502477.1|AL502477 AL502477 Hordeum vulgare Barke roots... 240 7e-062
gb|BM444825.1|BM444825 EBem09_SQ006_J13_R embryo, 1 Day ger... 240 7e-062
gb|BM377688.2|BM377688 EBem04_SQ003_O05_R embryo, 12 DPA, n... 240 7e-062
gb|CA000192.1|CA000192 HS09J10u HS Hordeum vulgare subsp. v... 240 7e-062
gb|AL500887.1|AL500887 AL500887 Hordeum vulgare Barke roots... 238 3e-061
gb|AL510481.1|AL510481 AL510481 Hordeum vulgare Barke devel... 238 3e-061
gb|BE193474.3|BE193474 HVSMEh0081C18f Hordeum vulgare 5-45 ... 238 3e-061
gb|BE602817.3|BE602817 HVSMEh0101O07f Hordeum vulgare 5-45 ... 238 3e-061
gb|AJ460823.1|AJ460823 AJ460823 S00002 Hordeum vulgare subs... 238 3e-061
gb|BQ657557.1|BQ657557 HA07O12u HA Hordeum vulgare subsp. v... 238 3e-061
gb|BM373875.2|BM373875 EBma03_SQ002_P24_R maternal, 8 DPA, ... 238 3e-061
gb|CA027999.1|CA027999 HZ60L02r HZ Hordeum vulgare subsp. v... 238 3e-061
gb|CB859670.1|CB859670 HI11D05w HI Hordeum vulgare subsp. v... 238 3e-061
gb|AV920357.1|AV920357 AV920357 K. Sato unpublished cDNA li... 232 2e-059
gb|BQ656284.1|BQ656284 HA05A22u HA Hordeum vulgare subsp. v... 232 2e-059
gb|BM377126.2|BM377126 EBem05_SQ004_D08_R embryo, 14 DPA, n... 232 2e-059
gb|BM100925.2|BM100925 EBpi01_SQ002_G05_R pistil, 1 DPA, no... 232 2e-059
gb|BU978918.1|BU978918 HA14K07r HA Hordeum vulgare subsp. v... 232 2e-059
gb|CA018086.1|CA018086 HV07G17r HV Hordeum vulgare subsp. v... 232 2e-059
gb|CA030656.1|CA030656 HX07L14r HX Hordeum vulgare subsp. v... 232 2e-059
gb|CB858495.1|CB858495 HI07E02w HI Hordeum vulgare subsp. v... 232 2e-059
gb|CB875248.1|CB875248 HX07L14w HX Hordeum vulgare subsp. v... 232 2e-059
gb|BQ768414.1|BQ768414 EBro08_SQ011_L13_R root, 3 week, dro... 230 6e-059
gb|CA027926.1|CA027926 HZ60H10r HZ Hordeum vulgare subsp. v... 230 6e-059
gb|CA026796.1|CA026796 HZ56P21r HZ Hordeum vulgare subsp. v... 228 3e-058
gb|BU980183.1|BU980183 HA18O19r HA Hordeum vulgare subsp. v... 224 4e-057
gb|BM096712.2|BM096712 EBma07_SQ001_F17_R maternal, 21 DPA,... 222 2e-056
gb|BM375464.2|BM375464 EBem06_SQ003_G24_R embryo, 21 DPA, n... 218 2e-055
gb|BU976535.1|BU976535 HA03N22u HA Hordeum vulgare subsp. v... 218 2e-055
gb|CA025726.1|CA025726 HZ52P14r HZ Hordeum vulgare subsp. v... 216 1e-054
gb|BQ657201.1|BQ657201 HA09D24u HA Hordeum vulgare subsp. v... 214 4e-054
gb|AJ460814.1|AJ460814 AJ460814 S00002 Hordeum vulgare subs... 204 4e-051
gb|AJ460815.1|AJ460815 AJ460815 S00002 Hordeum vulgare subs... 204 4e-051
gb|AJ460824.1|AJ460824 AJ460824 S00002 Hordeum vulgare subs... 202 1e-050
gb|BU998210.1|BU998210 HI10F12r HI Hordeum vulgare subsp. v... 196 9e-049
gb|BM100908.2|BM100908 EBpi01_SQ002_F12_R pistil, 1 DPA, no... 182 1e-044
gb|CA004069.1|CA004069 HS16H05r HS Hordeum vulgare subsp. v... 180 5e-044
gb|BE194261.3|BE194261 HVSMEh0084O12f Hordeum vulgare 5-45 ... 174 3e-042
gb|BE230916.1|BE230916 HVSMEg0001I22f Hordeum vulgare pre-a... 170 5e-041
gb|BQ757419.1|BQ757419 EBem10_SQ004_B05_R embryo, 2 Day ger... 168 2e-040
gb|CA027551.1|CA027551 HZ59E14r HZ Hordeum vulgare subsp. v... 168 2e-040
gb|BI777549.2|BI777549 EBro04_SQ001_I24_R root, 3 week, sal... 165 3e-039
gb|CA003359.1|CA003359 HS14D05r HS Hordeum vulgare subsp. v... 161 5e-038
gb|BQ753921.1|BQ753921 EBca01_SQ002_E11_R carpel, pre-anthe... 159 2e-037
gb|BQ756688.1|BQ756688 EBem09_SQ003_H11_R embryo, 1 Day ger... 157 8e-037
gb|AJ433501.1|AJ433501 AJ433501 S00002 Hordeum vulgare subs... 155 3e-036
gb|BQ458661.1|BQ458661 HA04J08r HA Hordeum vulgare subsp. v... 155 3e-036
gb|BQ469761.1|BQ469761 HZ01M19r HZ Hordeum vulgare subsp. v... 155 3e-036
gb|AJ460818.1|AJ460818 AJ460818 S00002 Hordeum vulgare subs... 153 1e-035
gb|BQ759467.1|BQ759467 EBpi01_SQ004_I13_R pistil, 1 DPA, no... 153 1e-035
gb|CA012155.1|CA012155 HT04J18r HT Hordeum vulgare subsp. v... 145 3e-033
gb|BQ469989.1|BQ469989 HX01H05T HX Hordeum vulgare subsp. v... 139 2e-031
gb|CA002703.1|CA002703 HS08E13r HS Hordeum vulgare subsp. v... 139 2e-031
gb|AV916684.1|AV916684 AV916684 K. Sato unpublished cDNA li... 135 3e-030
gb|AV921977.1|AV921977 AV921977 K. Sato unpublished cDNA li... 135 3e-030
gb|BM368401.2|BM368401 EBem08_SQ002_B19_R embryo, 40 DPA, n... 133 1e-029
gb|BM371273.2|BM371273 EBma08_SQ002_B15_R maternal, 28 DPA,... 131 4e-029
gb|CA031274.1|CA031274 HX09H19r HX Hordeum vulgare subsp. v... 131 4e-029
gb|BQ472094.1|BQ472094 HV04G07r HV Hordeum vulgare subsp. v... 129 2e-028
gb|BQ756631.1|BQ756631 EBem09_SQ003_E17_R embryo, 1 Day ger... 129 2e-028
gb|BQ467594.1|BQ467594 HS04E15r HS Hordeum vulgare subsp. v... 125 3e-027
gb|BQ756406.1|BQ756406 EBem08_SQ002_J20_R embryo, 40 DPA, n... 125 3e-027
gb|CK123401.1|CK123401 BES1824103n20 BES1824 Hordeum vulgar... 125 3e-027
gb|BJ457869.1|BJ457869 BJ457869 K. Sato unpublished cDNA li... 113 1e-023
gb|BJ458873.1|BJ458873 BJ458873 K. Sato unpublished cDNA li... 113 1e-023
gb|BQ657114.1|BQ657114 HA09K01u HA Hordeum vulgare subsp. v... 107 6e-022
gb|BQ756371.1|BQ756371 EBem08_SQ001_L10_R embryo, 40 DPA, n... 105 3e-021
gb|CB859900.1|CB859900 HI11P08w HI Hordeum vulgare subsp. v... 103 1e-020
gb|AJ460817.1|AJ460817 AJ460817 S00002 Hordeum vulgare subs... 92 4e-017
gb|BQ757340.1|BQ757340 EBem10_SQ003_M17_R embryo, 2 Day ger... 90 2e-016
gb|BM369611.1|BM369611 EBem07_SQ004_C01_R embryo, 28 DPA, n... 88 6e-016
gb|BM369630.1|BM369630 EBem07_SQ004_C20_R embryo, 28 DPA, n... 88 6e-016
gb|BJ451377.1|BJ451377 BJ451377 K. Sato unpublished cDNA li... 88 6e-016
gb|BQ459725.1|BQ459725 HA08E12r HA Hordeum vulgare subsp. v... 86 2e-015
gb|BQ657458.1|BQ657458 HA08E12u HA Hordeum vulgare subsp. v... 86 2e-015
gb|AJ460064.1|AJ460064 AJ460064 S00002 Hordeum vulgare subs... 80 1e-013
gb|BQ762673.1|BQ762673 EBro02_SQ004_N18 _R root, 3 week, hy... 74 9e-012
gb|CV057201.1|CV057201 BNEL25b2 Barley EST endosperm librar... 74 9e-012
gb|BE230898.1|BE230898 HVSMEg0001I10f Hordeum vulgare pre-a... 44 0.008
gb|BM376133.1|BM376133 EBma01_SQ002_H07_R maternal, 4 DPA, ... 42 0.032
gb|BM928833.1|BM928833 LP10006 Lemma/palea-enriched cDNA li... 40 0.13
gb|BM928834.1|BM928834 LP10007 Lemma/palea-enriched cDNA li... 40 0.13
gb|BM928843.1|BM928843 LP10030 Lemma/palea-enriched cDNA li... 40 0.13
gb|BM928858.1|BM928858 LP20059 Lemma/palea-enriched cDNA li... 40 0.13
gb|BQ134670.1|BQ134670 LP30108 Lemma/palea-enriched cDNA li... 40 0.13
gb|BQ134683.1|BQ134683 LP30159 Lemma/palea-enriched cDNA li... 40 0.13
gb|BM376088.2|BM376088 EBma01_SQ002_F01_R maternal, 4 DPA, ... 40 0.13
gb|BM376094.2|BM376094 EBma01_SQ002_F09_R maternal, 4 DPA, ... 40 0.13
gb|BM371381.2|BM371381 EBma08_SQ002_I05_R maternal, 28 DPA,... 40 0.13
gb|BM371382.2|BM371382 EBma08_SQ002_I06_R maternal, 28 DPA,... 40 0.13
gb|BM371429.2|BM371429 EBma08_SQ002_L04_R maternal, 28 DPA,... 40 0.13
gb|CD240764.1|CD240764 LP30021 Lemma/palea-enriched cDNA li... 40 0.13
gb|BM928867.1|BM928867 LP300020 Lemma/palea-enriched cDNA l... 38 0.50
gb|BQ764180.1|BQ764180 EBan01_SQ005_I01_R anther, yellow st... 38 0.50
>gb|BI947504.1|BI947504 HVSMEl0005L08f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0005L08f, mRNA sequence
Length = 505
Score = 333 bits (168), Expect = 6e-090
Identities = 399/474 (84%), Gaps = 4/474 (0%)
Strand = Plus / Minus
Query: 389 ctgcctgttcttcttcttgacaccggacttggcaacctggaggctgaggtacaccgagct 448
||||||||||||||||||||| || ||||||| ||||||||||||| ||||||| | |||
Sbjct: 489 ctgcctgttcttcttcttgaccccagacttggaaacctggaggctgcggtacactgcgct 430
Query: 449 cagcctagcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctggtt 508
|||||| ||||| || ||||||||||| |||||||||||||||||||| | ||||||||
Sbjct: 429 cagccttgcaagggccggcttggtcaggtcaggcctgtagtagttgtcgcatacctggtt 370
Query: 509 tttcacagccttggccatcttgcggaactccttgcgcatcacagacttgtggctgagctt 568
|| |||| |||||||||||||||||||||||||||||||| || |||||| ||||||
Sbjct: 369 cttgacagacttggccatcttgcggaactccttgcgcatcagagtcttgtgctggagctt 310
Query: 569 cgcaggtgcgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt-- 626
||||| | ||||||||||||||||||||| || || ||||| |||||| ||||| |
Sbjct: 309 ggcaggggtgttctgcttcttggtcttggtcgtggacaggacgacagccttgtcctctcc 250
Query: 627 -gcagctggctggatcgtcacagtcttcttgttcgccaaacccgagtgtttgaaggagtg 685
|| | |||||||| | ||| ||||| |||||||||| |||||| ||| |||||||
Sbjct: 249 cgctgatggctggacagccacggtcttgctgttcgccaagcccgagaacttgtaggagtg 190
Query: 686 gatgttgtagaggttgttcggctccttggtgaactgcaccttggcattgccgttgccgaa 745
|| |||||||||||||| ||||||||| ||||||| |||||||| |||| |||||||||
Sbjct: 189 gacattgtagaggttgttgggctccttgctgaactgtaccttggcgttgctgttgccgaa 130
Query: 746 ctgcttcacaaggaaggagttgttcttcctcacaacctgccagatcagatcccctggaac 805
|||||| | | |||| ||||||||||| |||| | || ||||| |||| || |||||
Sbjct: 129 ctgcttgatcaagaagcagttgttcttcttcacgagctcccagaccagagatcccggaac 70
Query: 806 ggttgccatttcccttcgccggagaagaggt-gccgcggcgtcgcctcgctctg 858
||| | |||||||||| |||||||| ||||| ||||||||| ||||| ||||||
Sbjct: 69 ggtagtcatttcccttggccggagatgaggtcgccgcggcgccgccttgctctg 16
>gb|BF263745.3|BF263745 HV_CEa0007I20f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0007I20f, mRNA sequence
Length = 672
Score = 333 bits (168), Expect = 6e-090
Identities = 399/474 (84%), Gaps = 4/474 (0%)
Strand = Plus / Minus
Query: 389 ctgcctgttcttcttcttgacaccggacttggcaacctggaggctgaggtacaccgagct 448
||||||||||||||||||||| || ||||||| ||||||||||||| ||||||| | |||
Sbjct: 487 ctgcctgttcttcttcttgaccccagacttggaaacctggaggctgcggtacactgcgct 428
Query: 449 cagcctagcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctggtt 508
|||||| ||||| || ||||||||||| |||||||||||||||||||| | ||||||||
Sbjct: 427 cagccttgcaagggccggcttggtcaggtcaggcctgtagtagttgtcgcatacctggtt 368
Query: 509 tttcacagccttggccatcttgcggaactccttgcgcatcacagacttgtggctgagctt 568
|| |||| |||||||||||||||||||||||||||||||| || |||||| ||||||
Sbjct: 367 cttgacagacttggccatcttgcggaactccttgcgcatcagagtcttgtgctggagctt 308
Query: 569 cgcaggtgcgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt-- 626
||||| | ||||||||||||||||||||| || || ||||| |||||| ||||| |
Sbjct: 307 ggcaggggtgttctgcttcttggtcttggtcgtggacaggacgacagccttgtcctctcc 248
Query: 627 -gcagctggctggatcgtcacagtcttcttgttcgccaaacccgagtgtttgaaggagtg 685
|| | |||||||| | ||| ||||| |||||||||| |||||| ||| |||||||
Sbjct: 247 cgctgatggctggacagccacggtcttgctgttcgccaagcccgagaacttgtaggagtg 188
Query: 686 gatgttgtagaggttgttcggctccttggtgaactgcaccttggcattgccgttgccgaa 745
|| |||||||||||||| ||||||||| ||||||| |||||||| |||| |||||||||
Sbjct: 187 gacattgtagaggttgttgggctccttgctgaactgtaccttggcgttgctgttgccgaa 128
Query: 746 ctgcttcacaaggaaggagttgttcttcctcacaacctgccagatcagatcccctggaac 805
|||||| | | |||| ||||||||||| |||| | || ||||| |||| || |||||
Sbjct: 127 ctgcttgatcaagaagcagttgttcttcttcacgagctcccagaccagagatcccggaac 68
Query: 806 ggttgccatttcccttcgccggagaagaggt-gccgcggcgtcgcctcgctctg 858
||| | |||||||||| |||||||| ||||| ||||||||| ||||| ||||||
Sbjct: 67 ggtagtcatttcccttggccggagatgaggtcgccgcggcgccgccttgctctg 14
>gb|AV916786.1|AV916786 AV916786 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags19k08 5', mRNA sequence
Length = 608
Score = 333 bits (168), Expect = 6e-090
Identities = 399/474 (84%), Gaps = 4/474 (0%)
Strand = Plus / Minus
Query: 389 ctgcctgttcttcttcttgacaccggacttggcaacctggaggctgaggtacaccgagct 448
||||||||||||||||||||| || ||||||| ||||||||||||| ||||||| | |||
Sbjct: 496 ctgcctgttcttcttcttgaccccagacttggaaacctggaggctgcggtacactgcgct 437
Query: 449 cagcctagcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctggtt 508
|||||| ||||| || ||||||||||| |||||||||||||||||||| | ||||||||
Sbjct: 436 cagccttgcaagggccggcttggtcaggtcaggcctgtagtagttgtcgcatacctggtt 377
Query: 509 tttcacagccttggccatcttgcggaactccttgcgcatcacagacttgtggctgagctt 568
|| |||| |||||||||||||||||||||||||||||||| || |||||| ||||||
Sbjct: 376 cttgacagacttggccatcttgcggaactccttgcgcatcagagtcttgtgctggagctt 317
Query: 569 cgcaggtgcgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt-- 626
||||| | ||||||||||||||||||||| || || ||||| |||||| ||||| |
Sbjct: 316 ggcaggggtgttctgcttcttggtcttggtcgtggacaggacgacagccttgtcctctcc 257
Query: 627 -gcagctggctggatcgtcacagtcttcttgttcgccaaacccgagtgtttgaaggagtg 685
|| | |||||||| | ||| ||||| |||||||||| |||||| ||| |||||||
Sbjct: 256 cgctgatggctggacagccacggtcttgctgttcgccaagcccgagaacttgtaggagtg 197
Query: 686 gatgttgtagaggttgttcggctccttggtgaactgcaccttggcattgccgttgccgaa 745
|| |||||||||||||| ||||||||| ||||||| |||||||| |||| |||||||||
Sbjct: 196 gacattgtagaggttgttgggctccttgctgaactgtaccttggcgttgctgttgccgaa 137
Query: 746 ctgcttcacaaggaaggagttgttcttcctcacaacctgccagatcagatcccctggaac 805
|||||| | | |||| ||||||||||| |||| | || ||||| |||| || |||||
Sbjct: 136 ctgcttgatcaagaagcagttgttcttcttcacgagctcccagaccagagatcccggaac 77
Query: 806 ggttgccatttcccttcgccggagaagaggt-gccgcggcgtcgcctcgctctg 858
||| | |||||||||| |||||||| ||||| ||||||||| ||||| ||||||
Sbjct: 76 ggtagtcatttcccttggccggagatgaggtcgccgcggcgccgccttgctctg 23
>gb|BQ458499.1|BQ458499 HA05A22r HA Hordeum vulgare subsp. vulgare cDNA clone HA05A22
5-PRIME, mRNA sequence
Length = 521
Score = 333 bits (168), Expect = 6e-090
Identities = 399/474 (84%), Gaps = 4/474 (0%)
Strand = Plus / Minus
Query: 389 ctgcctgttcttcttcttgacaccggacttggcaacctggaggctgaggtacaccgagct 448
||||||||||||||||||||| || ||||||| ||||||||||||| ||||||| | |||
Sbjct: 499 ctgcctgttcttcttcttgaccccagacttggaaacctggaggctgcggtacactgcgct 440
Query: 449 cagcctagcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctggtt 508
|||||| ||||| || ||||||||||| |||||||||||||||||||| | ||||||||
Sbjct: 439 cagccttgcaagggccggcttggtcaggtcaggcctgtagtagttgtcgcatacctggtt 380
Query: 509 tttcacagccttggccatcttgcggaactccttgcgcatcacagacttgtggctgagctt 568
|| |||| |||||||||||||||||||||||||||||||| || |||||| ||||||
Sbjct: 379 cttgacagacttggccatcttgcggaactccttgcgcatcagagtcttgtgctggagctt 320
Query: 569 cgcaggtgcgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt-- 626
||||| | ||||||||||||||||||||| || || ||||| |||||| ||||| |
Sbjct: 319 ggcaggggtgttctgcttcttggtcttggtcgtggacaggacgacagccttgtcctctcc 260
Query: 627 -gcagctggctggatcgtcacagtcttcttgttcgccaaacccgagtgtttgaaggagtg 685
|| | |||||||| | ||| ||||| |||||||||| |||||| ||| |||||||
Sbjct: 259 cgctgatggctggacagccacggtcttgctgttcgccaagcccgagaacttgtaggagtg 200
Query: 686 gatgttgtagaggttgttcggctccttggtgaactgcaccttggcattgccgttgccgaa 745
|| |||||||||||||| ||||||||| ||||||| |||||||| |||| |||||||||
Sbjct: 199 gacattgtagaggttgttgggctccttgctgaactgtaccttggcgttgctgttgccgaa 140
Query: 746 ctgcttcacaaggaaggagttgttcttcctcacaacctgccagatcagatcccctggaac 805
|||||| | | |||| ||||||||||| |||| | || ||||| |||| || |||||
Sbjct: 139 ctgcttgatcaagaagcagttgttcttcttcacgagctcccagaccagagatcccggaac 80
Query: 806 ggttgccatttcccttcgccggagaagaggt-gccgcggcgtcgcctcgctctg 858
||| | |||||||||| |||||||| ||||| ||||||||| ||||| ||||||
Sbjct: 79 ggtagtcatttcccttggccggagatgaggtcgccgcggcgccgccttgctctg 26
>gb|BQ460364.1|BQ460364 HA09O16r HA Hordeum vulgare subsp. vulgare cDNA clone HA09O16
5-PRIME, mRNA sequence
Length = 587
Score = 333 bits (168), Expect = 6e-090
Identities = 399/474 (84%), Gaps = 4/474 (0%)
Strand = Plus / Minus
Query: 389 ctgcctgttcttcttcttgacaccggacttggcaacctggaggctgaggtacaccgagct 448
||||||||||||||||||||| || ||||||| ||||||||||||| ||||||| | |||
Sbjct: 505 ctgcctgttcttcttcttgaccccagacttggaaacctggaggctgcggtacactgcgct 446
Query: 449 cagcctagcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctggtt 508
|||||| ||||| || ||||||||||| |||||||||||||||||||| | ||||||||
Sbjct: 445 cagccttgcaagggccggcttggtcaggtcaggcctgtagtagttgtcgcatacctggtt 386
Query: 509 tttcacagccttggccatcttgcggaactccttgcgcatcacagacttgtggctgagctt 568
|| |||| |||||||||||||||||||||||||||||||| || |||||| ||||||
Sbjct: 385 cttgacagacttggccatcttgcggaactccttgcgcatcagagtcttgtgctggagctt 326
Query: 569 cgcaggtgcgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt-- 626
||||| | ||||||||||||||||||||| || || ||||| |||||| ||||| |
Sbjct: 325 ggcaggggtgttctgcttcttggtcttggtcgtggacaggacgacagccttgtcctctcc 266
Query: 627 -gcagctggctggatcgtcacagtcttcttgttcgccaaacccgagtgtttgaaggagtg 685
|| | |||||||| | ||| ||||| |||||||||| |||||| ||| |||||||
Sbjct: 265 cgctgatggctggacagccacggtcttgctgttcgccaagcccgagaacttgtaggagtg 206
Query: 686 gatgttgtagaggttgttcggctccttggtgaactgcaccttggcattgccgttgccgaa 745
|| |||||||||||||| ||||||||| ||||||| |||||||| |||| |||||||||
Sbjct: 205 gacattgtagaggttgttgggctccttgctgaactgtaccttggcgttgctgttgccgaa 146
Query: 746 ctgcttcacaaggaaggagttgttcttcctcacaacctgccagatcagatcccctggaac 805
|||||| | | |||| ||||||||||| |||| | || ||||| |||| || |||||
Sbjct: 145 ctgcttgatcaagaagcagttgttcttcttcacgagctcccagaccagagatcccggaac 86
Query: 806 ggttgccatttcccttcgccggagaagaggt-gccgcggcgtcgcctcgctctg 858
||| | |||||||||| |||||||| ||||| ||||||||| ||||| ||||||
Sbjct: 85 ggtagtcatttcccttggccggagatgaggtcgccgcggcgccgccttgctctg 32
>gb|BQ460503.1|BQ460503 HA09G03r HA Hordeum vulgare subsp. vulgare cDNA clone HA09G03
5-PRIME, mRNA sequence
Length = 559
Score = 333 bits (168), Expect = 6e-090
Identities = 399/474 (84%), Gaps = 4/474 (0%)
Strand = Plus / Minus
Query: 389 ctgcctgttcttcttcttgacaccggacttggcaacctggaggctgaggtacaccgagct 448
||||||||||||||||||||| || ||||||| ||||||||||||| ||||||| | |||
Sbjct: 505 ctgcctgttcttcttcttgaccccagacttggaaacctggaggctgcggtacactgcgct 446
Query: 449 cagcctagcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctggtt 508
|||||| ||||| || ||||||||||| |||||||||||||||||||| | ||||||||
Sbjct: 445 cagccttgcaagggccggcttggtcaggtcaggcctgtagtagttgtcgcatacctggtt 386
Query: 509 tttcacagccttggccatcttgcggaactccttgcgcatcacagacttgtggctgagctt 568
|| |||| |||||||||||||||||||||||||||||||| || |||||| ||||||
Sbjct: 385 cttgacagacttggccatcttgcggaactccttgcgcatcagagtcttgtgctggagctt 326
Query: 569 cgcaggtgcgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt-- 626
||||| | ||||||||||||||||||||| || || ||||| |||||| ||||| |
Sbjct: 325 ggcaggggtgttctgcttcttggtcttggtcgtggacaggacgacagccttgtcctctcc 266
Query: 627 -gcagctggctggatcgtcacagtcttcttgttcgccaaacccgagtgtttgaaggagtg 685
|| | |||||||| | ||| ||||| |||||||||| |||||| ||| |||||||
Sbjct: 265 cgctgatggctggacagccacggtcttgctgttcgccaagcccgagaacttgtaggagtg 206
Query: 686 gatgttgtagaggttgttcggctccttggtgaactgcaccttggcattgccgttgccgaa 745
|| |||||||||||||| ||||||||| ||||||| |||||||| |||| |||||||||
Sbjct: 205 gacattgtagaggttgttgggctccttgctgaactgtaccttggcgttgctgttgccgaa 146
Query: 746 ctgcttcacaaggaaggagttgttcttcctcacaacctgccagatcagatcccctggaac 805
|||||| | | |||| ||||||||||| |||| | || ||||| |||| || |||||
Sbjct: 145 ctgcttgatcaagaagcagttgttcttcttcacgagctcccagaccagagatcccggaac 86
Query: 806 ggttgccatttcccttcgccggagaagaggt-gccgcggcgtcgcctcgctctg 858
||| | |||||||||| |||||||| ||||| ||||||||| ||||| ||||||
Sbjct: 85 ggtagtcatttcccttggccggagatgaggtcgccgcggcgccgccttgctctg 32
>gb|BQ470988.1|BQ470988 HX04K05r HX Hordeum vulgare subsp. vulgare cDNA clone HX04K05
5-PRIME, mRNA sequence
Length = 644
Score = 333 bits (168), Expect = 6e-090
Identities = 399/474 (84%), Gaps = 4/474 (0%)
Strand = Plus / Minus
Query: 389 ctgcctgttcttcttcttgacaccggacttggcaacctggaggctgaggtacaccgagct 448
||||||||||||||||||||| || ||||||| ||||||||||||| ||||||| | |||
Sbjct: 506 ctgcctgttcttcttcttgaccccagacttggaaacctggaggctgcggtacactgcgct 447
Query: 449 cagcctagcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctggtt 508
|||||| ||||| || ||||||||||| |||||||||||||||||||| | ||||||||
Sbjct: 446 cagccttgcaagggccggcttggtcaggtcaggcctgtagtagttgtcgcatacctggtt 387
Query: 509 tttcacagccttggccatcttgcggaactccttgcgcatcacagacttgtggctgagctt 568
|| |||| |||||||||||||||||||||||||||||||| || |||||| ||||||
Sbjct: 386 cttgacagacttggccatcttgcggaactccttgcgcatcagagtcttgtgctggagctt 327
Query: 569 cgcaggtgcgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt-- 626
||||| | ||||||||||||||||||||| || || ||||| |||||| ||||| |
Sbjct: 326 ggcaggggtgttctgcttcttggtcttggtcgtggacaggacgacagccttgtcctctcc 267
Query: 627 -gcagctggctggatcgtcacagtcttcttgttcgccaaacccgagtgtttgaaggagtg 685
|| | |||||||| | ||| ||||| |||||||||| |||||| ||| |||||||
Sbjct: 266 cgctgatggctggacagccacggtcttgctgttcgccaagcccgagaacttgtaggagtg 207
Query: 686 gatgttgtagaggttgttcggctccttggtgaactgcaccttggcattgccgttgccgaa 745
|| |||||||||||||| ||||||||| ||||||| |||||||| |||| |||||||||
Sbjct: 206 gacattgtagaggttgttgggctccttgctgaactgtaccttggcgttgctgttgccgaa 147
Query: 746 ctgcttcacaaggaaggagttgttcttcctcacaacctgccagatcagatcccctggaac 805
|||||| | | |||| ||||||||||| |||| | || ||||| |||| || |||||
Sbjct: 146 ctgcttgatcaagaagcagttgttcttcttcacgagctcccagaccagagatcccggaac 87
Query: 806 ggttgccatttcccttcgccggagaagaggt-gccgcggcgtcgcctcgctctg 858
||| | |||||||||| |||||||| ||||| ||||||||| ||||| ||||||
Sbjct: 86 ggtagtcatttcccttggccggagatgaggtcgccgcggcgccgccttgctctg 33
>gb|BM376771.2|BM376771 EBem05_SQ003_D01_R embryo, 14 DPA, no treatment, cv Optic, EBem05
Hordeum vulgare subsp. vulgare cDNA clone
EBem05_SQ003_D01 5', mRNA sequence
Length = 582
Score = 333 bits (168), Expect = 6e-090
Identities = 399/474 (84%), Gaps = 4/474 (0%)
Strand = Plus / Minus
Query: 389 ctgcctgttcttcttcttgacaccggacttggcaacctggaggctgaggtacaccgagct 448
||||||||||||||||||||| || ||||||| ||||||||||||| ||||||| | |||
Sbjct: 489 ctgcctgttcttcttcttgaccccagacttggaaacctggaggctgcggtacactgcgct 430
Query: 449 cagcctagcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctggtt 508
|||||| ||||| || ||||||||||| |||||||||||||||||||| | ||||||||
Sbjct: 429 cagccttgcaagggccggcttggtcaggtcaggcctgtagtagttgtcgcatacctggtt 370
Query: 509 tttcacagccttggccatcttgcggaactccttgcgcatcacagacttgtggctgagctt 568
|| |||| |||||||||||||||||||||||||||||||| || |||||| ||||||
Sbjct: 369 cttgacagacttggccatcttgcggaactccttgcgcatcagagtcttgtgctggagctt 310
Query: 569 cgcaggtgcgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt-- 626
||||| | ||||||||||||||||||||| || || ||||| |||||| ||||| |
Sbjct: 309 ggcaggggtgttctgcttcttggtcttggtcgtggacaggacgacagccttgtcctctcc 250
Query: 627 -gcagctggctggatcgtcacagtcttcttgttcgccaaacccgagtgtttgaaggagtg 685
|| | |||||||| | ||| ||||| |||||||||| |||||| ||| |||||||
Sbjct: 249 cgctgatggctggacagccacggtcttgctgttcgccaagcccgagaacttgtaggagtg 190
Query: 686 gatgttgtagaggttgttcggctccttggtgaactgcaccttggcattgccgttgccgaa 745
|| |||||||||||||| ||||||||| ||||||| |||||||| |||| |||||||||
Sbjct: 189 gacattgtagaggttgttgggctccttgctgaactgtaccttggcgttgctgttgccgaa 130
Query: 746 ctgcttcacaaggaaggagttgttcttcctcacaacctgccagatcagatcccctggaac 805
|||||| | | |||| ||||||||||| |||| | || ||||| |||| || |||||
Sbjct: 129 ctgcttgatcaagaagcagttgttcttcttcacgagctcccagaccagagatcccggaac 70
Query: 806 ggttgccatttcccttcgccggagaagaggt-gccgcggcgtcgcctcgctctg 858
||| | |||||||||| |||||||| ||||| ||||||||| ||||| ||||||
Sbjct: 69 ggtagtcatttcccttggccggagatgaggtcgccgcggcgccgccttgctctg 16
>gb|BM369548.2|BM369548 EBem07_SQ003_O19_R embryo, 28 DPA, no treatment, cv Optic, EBem07
Hordeum vulgare subsp. vulgare cDNA clone
EBem07_SQ003_O19 5', mRNA sequence
Length = 582
Score = 333 bits (168), Expect = 6e-090
Identities = 399/474 (84%), Gaps = 4/474 (0%)
Strand = Plus / Minus
Query: 389 ctgcctgttcttcttcttgacaccggacttggcaacctggaggctgaggtacaccgagct 448
||||||||||||||||||||| || ||||||| ||||||||||||| ||||||| | |||
Sbjct: 480 ctgcctgttcttcttcttgaccccagacttggaaacctggaggctgcggtacactgcgct 421
Query: 449 cagcctagcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctggtt 508
|||||| ||||| || ||||||||||| |||||||||||||||||||| | ||||||||
Sbjct: 420 cagccttgcaagggccggcttggtcaggtcaggcctgtagtagttgtcgcatacctggtt 361
Query: 509 tttcacagccttggccatcttgcggaactccttgcgcatcacagacttgtggctgagctt 568
|| |||| |||||||||||||||||||||||||||||||| || |||||| ||||||
Sbjct: 360 cttgacagacttggccatcttgcggaactccttgcgcatcagagtcttgtgctggagctt 301
Query: 569 cgcaggtgcgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt-- 626
||||| | ||||||||||||||||||||| || || ||||| |||||| ||||| |
Sbjct: 300 ggcaggggtgttctgcttcttggtcttggtcgtggacaggacgacagccttgtcctctcc 241
Query: 627 -gcagctggctggatcgtcacagtcttcttgttcgccaaacccgagtgtttgaaggagtg 685
|| | |||||||| | ||| ||||| |||||||||| |||||| ||| |||||||
Sbjct: 240 cgctgatggctggacagccacggtcttgctgttcgccaagcccgagaacttgtaggagtg 181
Query: 686 gatgttgtagaggttgttcggctccttggtgaactgcaccttggcattgccgttgccgaa 745
|| |||||||||||||| ||||||||| ||||||| |||||||| |||| |||||||||
Sbjct: 180 gacattgtagaggttgttgggctccttgctgaactgtaccttggcgttgctgttgccgaa 121
Query: 746 ctgcttcacaaggaaggagttgttcttcctcacaacctgccagatcagatcccctggaac 805
|||||| | | |||| ||||||||||| |||| | || ||||| |||| || |||||
Sbjct: 120 ctgcttgatcaagaagcagttgttcttcttcacgagctcccagaccagagatcccggaac 61
Query: 806 ggttgccatttcccttcgccggagaagaggt-gccgcggcgtcgcctcgctctg 858
||| | |||||||||| |||||||| ||||| ||||||||| ||||| ||||||
Sbjct: 60 ggtagtcatttcccttggccggagatgaggtcgccgcggcgccgccttgctctg 7
>gb|BM368848.2|BM368848 EBem08_SQ004_M09_R embryo, 40 DPA, no treatment, cv Optic, EBem08
Hordeum vulgare subsp. vulgare cDNA clone
EBem08_SQ004_M09 5', mRNA sequence
Length = 566
Score = 333 bits (168), Expect = 6e-090
Identities = 399/474 (84%), Gaps = 4/474 (0%)
Strand = Plus / Minus
Query: 389 ctgcctgttcttcttcttgacaccggacttggcaacctggaggctgaggtacaccgagct 448
||||||||||||||||||||| || ||||||| ||||||||||||| ||||||| | |||
Sbjct: 475 ctgcctgttcttcttcttgaccccagacttggaaacctggaggctgcggtacactgcgct 416
Query: 449 cagcctagcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctggtt 508
|||||| ||||| || ||||||||||| |||||||||||||||||||| | ||||||||
Sbjct: 415 cagccttgcaagggccggcttggtcaggtcaggcctgtagtagttgtcgcatacctggtt 356
Query: 509 tttcacagccttggccatcttgcggaactccttgcgcatcacagacttgtggctgagctt 568
|| |||| |||||||||||||||||||||||||||||||| || |||||| ||||||
Sbjct: 355 cttgacagacttggccatcttgcggaactccttgcgcatcagagtcttgtgctggagctt 296
Query: 569 cgcaggtgcgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt-- 626
||||| | ||||||||||||||||||||| || || ||||| |||||| ||||| |
Sbjct: 295 ggcaggggtgttctgcttcttggtcttggtcgtggacaggacgacagccttgtcctctcc 236
Query: 627 -gcagctggctggatcgtcacagtcttcttgttcgccaaacccgagtgtttgaaggagtg 685
|| | |||||||| | ||| ||||| |||||||||| |||||| ||| |||||||
Sbjct: 235 cgctgatggctggacagccacggtcttgctgttcgccaagcccgagaacttgtaggagtg 176
Query: 686 gatgttgtagaggttgttcggctccttggtgaactgcaccttggcattgccgttgccgaa 745
|| |||||||||||||| ||||||||| ||||||| |||||||| |||| |||||||||
Sbjct: 175 gacattgtagaggttgttgggctccttgctgaactgtaccttggcgttgctgttgccgaa 116
Query: 746 ctgcttcacaaggaaggagttgttcttcctcacaacctgccagatcagatcccctggaac 805
|||||| | | |||| ||||||||||| |||| | || ||||| |||| || |||||
Sbjct: 115 ctgcttgatcaagaagcagttgttcttcttcacgagctcccagaccagagatcccggaac 56
Query: 806 ggttgccatttcccttcgccggagaagaggt-gccgcggcgtcgcctcgctctg 858
||| | |||||||||| |||||||| ||||| ||||||||| ||||| ||||||
Sbjct: 55 ggtagtcatttcccttggccggagatgaggtcgccgcggcgccgccttgctctg 2
>gb|BM376181.2|BM376181 EBma01_SQ002_J11_R maternal, 4 DPA, no treatment, cv Optic, EBma01
Hordeum vulgare subsp. vulgare cDNA clone
EBma01_SQ002_J11 5', mRNA sequence
Length = 548
Score = 333 bits (168), Expect = 6e-090
Identities = 399/474 (84%), Gaps = 4/474 (0%)
Strand = Plus / Minus
Query: 389 ctgcctgttcttcttcttgacaccggacttggcaacctggaggctgaggtacaccgagct 448
||||||||||||||||||||| || ||||||| ||||||||||||| ||||||| | |||
Sbjct: 490 ctgcctgttcttcttcttgaccccagacttggaaacctggaggctgcggtacactgcgct 431
Query: 449 cagcctagcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctggtt 508
|||||| ||||| || ||||||||||| |||||||||||||||||||| | ||||||||
Sbjct: 430 cagccttgcaagggccggcttggtcaggtcaggcctgtagtagttgtcgcatacctggtt 371
Query: 509 tttcacagccttggccatcttgcggaactccttgcgcatcacagacttgtggctgagctt 568
|| |||| |||||||||||||||||||||||||||||||| || |||||| ||||||
Sbjct: 370 cttgacagacttggccatcttgcggaactccttgcgcatcagagtcttgtgctggagctt 311
Query: 569 cgcaggtgcgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt-- 626
||||| | ||||||||||||||||||||| || || ||||| |||||| ||||| |
Sbjct: 310 ggcaggggtgttctgcttcttggtcttggtcgtggacaggacgacagccttgtcctctcc 251
Query: 627 -gcagctggctggatcgtcacagtcttcttgttcgccaaacccgagtgtttgaaggagtg 685
|| | |||||||| | ||| ||||| |||||||||| |||||| ||| |||||||
Sbjct: 250 cgctgatggctggacagccacggtcttgctgttcgccaagcccgagaacttgtaggagtg 191
Query: 686 gatgttgtagaggttgttcggctccttggtgaactgcaccttggcattgccgttgccgaa 745
|| |||||||||||||| ||||||||| ||||||| |||||||| |||| |||||||||
Sbjct: 190 gacattgtagaggttgttgggctccttgctgaactgtaccttggcgttgctgttgccgaa 131
Query: 746 ctgcttcacaaggaaggagttgttcttcctcacaacctgccagatcagatcccctggaac 805
|||||| | | |||| ||||||||||| |||| | || ||||| |||| || |||||
Sbjct: 130 ctgcttgatcaagaagcagttgttcttcttcacgagctcccagaccagagatcccggaac 71
Query: 806 ggttgccatttcccttcgccggagaagaggt-gccgcggcgtcgcctcgctctg 858
||| | |||||||||| |||||||| ||||| ||||||||| ||||| ||||||
Sbjct: 70 ggtagtcatttcccttggccggagatgaggtcgccgcggcgccgccttgctctg 17
>gb|BM372228.2|BM372228 EBro03_SQ004_G02_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ004_G02 5', mRNA sequence
Length = 582
Score = 333 bits (168), Expect = 6e-090
Identities = 399/474 (84%), Gaps = 4/474 (0%)
Strand = Plus / Minus
Query: 389 ctgcctgttcttcttcttgacaccggacttggcaacctggaggctgaggtacaccgagct 448
||||||||||||||||||||| || ||||||| ||||||||||||| ||||||| | |||
Sbjct: 496 ctgcctgttcttcttcttgaccccagacttggaaacctggaggctgcggtacactgcgct 437
Query: 449 cagcctagcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctggtt 508
|||||| ||||| || ||||||||||| |||||||||||||||||||| | ||||||||
Sbjct: 436 cagccttgcaagggccggcttggtcaggtcaggcctgtagtagttgtcgcatacctggtt 377
Query: 509 tttcacagccttggccatcttgcggaactccttgcgcatcacagacttgtggctgagctt 568
|| |||| |||||||||||||||||||||||||||||||| || |||||| ||||||
Sbjct: 376 cttgacagacttggccatcttgcggaactccttgcgcatcagagtcttgtgctggagctt 317
Query: 569 cgcaggtgcgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt-- 626
||||| | ||||||||||||||||||||| || || ||||| |||||| ||||| |
Sbjct: 316 ggcaggggtgttctgcttcttggtcttggtcgtggacaggacgacagccttgtcctctcc 257
Query: 627 -gcagctggctggatcgtcacagtcttcttgttcgccaaacccgagtgtttgaaggagtg 685
|| | |||||||| | ||| ||||| |||||||||| |||||| ||| |||||||
Sbjct: 256 cgctgatggctggacagccacggtcttgctgttcgccaagcccgagaacttgtaggagtg 197
Query: 686 gatgttgtagaggttgttcggctccttggtgaactgcaccttggcattgccgttgccgaa 745
|| |||||||||||||| ||||||||| ||||||| |||||||| |||| |||||||||
Sbjct: 196 gacattgtagaggttgttgggctccttgctgaactgtaccttggcgttgctgttgccgaa 137
Query: 746 ctgcttcacaaggaaggagttgttcttcctcacaacctgccagatcagatcccctggaac 805
|||||| | | |||| ||||||||||| |||| | || ||||| |||| || |||||
Sbjct: 136 ctgcttgatcaagaagcagttgttcttcttcacgagctcccagaccagagatcccggaac 77
Query: 806 ggttgccatttcccttcgccggagaagaggt-gccgcggcgtcgcctcgctctg 858
||| | |||||||||| |||||||| ||||| ||||||||| ||||| ||||||
Sbjct: 76 ggtagtcatttcccttggccggagatgaggtcgccgcggcgccgccttgctctg 23
>gb|BQ760071.1|BQ760071 EBpi07_SQ003_J01_R pistil, 12 DPA, no treatment, cv Optic, EBpi07
Hordeum vulgare subsp. vulgare cDNA clone
EBpi07_SQ003_J01 5', mRNA sequence
Length = 676
Score = 333 bits (168), Expect = 6e-090
Identities = 399/474 (84%), Gaps = 4/474 (0%)
Strand = Plus / Minus
Query: 389 ctgcctgttcttcttcttgacaccggacttggcaacctggaggctgaggtacaccgagct 448
||||||||||||||||||||| || ||||||| ||||||||||||| ||||||| | |||
Sbjct: 493 ctgcctgttcttcttcttgaccccagacttggaaacctggaggctgcggtacactgcgct 434
Query: 449 cagcctagcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctggtt 508
|||||| ||||| || ||||||||||| |||||||||||||||||||| | ||||||||
Sbjct: 433 cagccttgcaagggccggcttggtcaggtcaggcctgtagtagttgtcgcatacctggtt 374
Query: 509 tttcacagccttggccatcttgcggaactccttgcgcatcacagacttgtggctgagctt 568
|| |||| |||||||||||||||||||||||||||||||| || |||||| ||||||
Sbjct: 373 cttgacagacttggccatcttgcggaactccttgcgcatcagagtcttgtgctggagctt 314
Query: 569 cgcaggtgcgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt-- 626
||||| | ||||||||||||||||||||| || || ||||| |||||| ||||| |
Sbjct: 313 ggcaggggtgttctgcttcttggtcttggtcgtggacaggacgacagccttgtcctctcc 254
Query: 627 -gcagctggctggatcgtcacagtcttcttgttcgccaaacccgagtgtttgaaggagtg 685
|| | |||||||| | ||| ||||| |||||||||| |||||| ||| |||||||
Sbjct: 253 cgctgatggctggacagccacggtcttgctgttcgccaagcccgagaacttgtaggagtg 194
Query: 686 gatgttgtagaggttgttcggctccttggtgaactgcaccttggcattgccgttgccgaa 745
|| |||||||||||||| ||||||||| ||||||| |||||||| |||| |||||||||
Sbjct: 193 gacattgtagaggttgttgggctccttgctgaactgtaccttggcgttgctgttgccgaa 134
Query: 746 ctgcttcacaaggaaggagttgttcttcctcacaacctgccagatcagatcccctggaac 805
|||||| | | |||| ||||||||||| |||| | || ||||| |||| || |||||
Sbjct: 133 ctgcttgatcaagaagcagttgttcttcttcacgagctcccagaccagagatcccggaac 74
Query: 806 ggttgccatttcccttcgccggagaagaggt-gccgcggcgtcgcctcgctctg 858
||| | |||||||||| |||||||| ||||| ||||||||| ||||| ||||||
Sbjct: 73 ggtagtcatttcccttggccggagatgaggtcgccgcggcgccgccttgctctg 20
>gb|BQ764827.1|BQ764827 EBca01_SQ005_C05_R carpel, pre-anthesis, no treatment, cv Optic,
EBca01 Hordeum vulgare subsp. vulgare cDNA clone
EBca01_SQ005_C05 5', mRNA sequence
Length = 687
Score = 333 bits (168), Expect = 6e-090
Identities = 399/474 (84%), Gaps = 4/474 (0%)
Strand = Plus / Minus
Query: 389 ctgcctgttcttcttcttgacaccggacttggcaacctggaggctgaggtacaccgagct 448
||||||||||||||||||||| || ||||||| ||||||||||||| ||||||| | |||
Sbjct: 488 ctgcctgttcttcttcttgaccccagacttggaaacctggaggctgcggtacactgcgct 429
Query: 449 cagcctagcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctggtt 508
|||||| ||||| || ||||||||||| |||||||||||||||||||| | ||||||||
Sbjct: 428 cagccttgcaagggccggcttggtcaggtcaggcctgtagtagttgtcgcatacctggtt 369
Query: 509 tttcacagccttggccatcttgcggaactccttgcgcatcacagacttgtggctgagctt 568
|| |||| |||||||||||||||||||||||||||||||| || |||||| ||||||
Sbjct: 368 cttgacagacttggccatcttgcggaactccttgcgcatcagagtcttgtgctggagctt 309
Query: 569 cgcaggtgcgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt-- 626
||||| | ||||||||||||||||||||| || || ||||| |||||| ||||| |
Sbjct: 308 ggcaggggtgttctgcttcttggtcttggtcgtggacaggacgacagccttgtcctctcc 249
Query: 627 -gcagctggctggatcgtcacagtcttcttgttcgccaaacccgagtgtttgaaggagtg 685
|| | |||||||| | ||| ||||| |||||||||| |||||| ||| |||||||
Sbjct: 248 cgctgatggctggacagccacggtcttgctgttcgccaagcccgagaacttgtaggagtg 189
Query: 686 gatgttgtagaggttgttcggctccttggtgaactgcaccttggcattgccgttgccgaa 745
|| |||||||||||||| ||||||||| ||||||| |||||||| |||| |||||||||
Sbjct: 188 gacattgtagaggttgttgggctccttgctgaactgtaccttggcgttgctgttgccgaa 129
Query: 746 ctgcttcacaaggaaggagttgttcttcctcacaacctgccagatcagatcccctggaac 805
|||||| | | |||| ||||||||||| |||| | || ||||| |||| || |||||
Sbjct: 128 ctgcttgatcaagaagcagttgttcttcttcacgagctcccagaccagagatcccggaac 69
Query: 806 ggttgccatttcccttcgccggagaagaggt-gccgcggcgtcgcctcgctctg 858
||| | |||||||||| |||||||| ||||| ||||||||| ||||| ||||||
Sbjct: 68 ggtagtcatttcccttggccggagatgaggtcgccgcggcgccgccttgctctg 15
>gb|BQ768464.1|BQ768464 EBro08_SQ011_E19_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ011_E19 5', mRNA sequence
Length = 663
Score = 333 bits (168), Expect = 6e-090
Identities = 399/474 (84%), Gaps = 4/474 (0%)
Strand = Plus / Minus
Query: 389 ctgcctgttcttcttcttgacaccggacttggcaacctggaggctgaggtacaccgagct 448
||||||||||||||||||||| || ||||||| ||||||||||||| ||||||| | |||
Sbjct: 480 ctgcctgttcttcttcttgaccccagacttggaaacctggaggctgcggtacactgcgct 421
Query: 449 cagcctagcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctggtt 508
|||||| ||||| || ||||||||||| |||||||||||||||||||| | ||||||||
Sbjct: 420 cagccttgcaagggccggcttggtcaggtcaggcctgtagtagttgtcgcatacctggtt 361
Query: 509 tttcacagccttggccatcttgcggaactccttgcgcatcacagacttgtggctgagctt 568
|| |||| |||||||||||||||||||||||||||||||| || |||||| ||||||
Sbjct: 360 cttgacagacttggccatcttgcggaactccttgcgcatcagagtcttgtgctggagctt 301
Query: 569 cgcaggtgcgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt-- 626
||||| | ||||||||||||||||||||| || || ||||| |||||| ||||| |
Sbjct: 300 ggcaggggtgttctgcttcttggtcttggtcgtggacaggacgacagccttgtcctctcc 241
Query: 627 -gcagctggctggatcgtcacagtcttcttgttcgccaaacccgagtgtttgaaggagtg 685
|| | |||||||| | ||| ||||| |||||||||| |||||| ||| |||||||
Sbjct: 240 cgctgatggctggacagccacggtcttgctgttcgccaagcccgagaacttgtaggagtg 181
Query: 686 gatgttgtagaggttgttcggctccttggtgaactgcaccttggcattgccgttgccgaa 745
|| |||||||||||||| ||||||||| ||||||| |||||||| |||| |||||||||
Sbjct: 180 gacattgtagaggttgttgggctccttgctgaactgtaccttggcgttgctgttgccgaa 121
Query: 746 ctgcttcacaaggaaggagttgttcttcctcacaacctgccagatcagatcccctggaac 805
|||||| | | |||| ||||||||||| |||| | || ||||| |||| || |||||
Sbjct: 120 ctgcttgatcaagaagcagttgttcttcttcacgagctcccagaccagagatcccggaac 61
Query: 806 ggttgccatttcccttcgccggagaagaggt-gccgcggcgtcgcctcgctctg 858
||| | |||||||||| |||||||| ||||| ||||||||| ||||| ||||||
Sbjct: 60 ggtagtcatttcccttggccggagatgaggtcgccgcggcgccgccttgctctg 7
>gb|BQ768604.1|BQ768604 EBro08_SQ012_M03_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ012_M03 5', mRNA sequence
Length = 650
Score = 333 bits (168), Expect = 6e-090
Identities = 399/474 (84%), Gaps = 4/474 (0%)
Strand = Plus / Minus
Query: 389 ctgcctgttcttcttcttgacaccggacttggcaacctggaggctgaggtacaccgagct 448
||||||||||||||||||||| || ||||||| ||||||||||||| ||||||| | |||
Sbjct: 475 ctgcctgttcttcttcttgaccccagacttggaaacctggaggctgcggtacactgcgct 416
Query: 449 cagcctagcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctggtt 508
|||||| ||||| || ||||||||||| |||||||||||||||||||| | ||||||||
Sbjct: 415 cagccttgcaagggccggcttggtcaggtcaggcctgtagtagttgtcgcatacctggtt 356
Query: 509 tttcacagccttggccatcttgcggaactccttgcgcatcacagacttgtggctgagctt 568
|| |||| |||||||||||||||||||||||||||||||| || |||||| ||||||
Sbjct: 355 cttgacagacttggccatcttgcggaactccttgcgcatcagagtcttgtgctggagctt 296
Query: 569 cgcaggtgcgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt-- 626
||||| | ||||||||||||||||||||| || || ||||| |||||| ||||| |
Sbjct: 295 ggcaggggtgttctgcttcttggtcttggtcgtggacaggacgacagccttgtcctctcc 236
Query: 627 -gcagctggctggatcgtcacagtcttcttgttcgccaaacccgagtgtttgaaggagtg 685
|| | |||||||| | ||| ||||| |||||||||| |||||| ||| |||||||
Sbjct: 235 cgctgatggctggacagccacggtcttgctgttcgccaagcccgagaacttgtaggagtg 176
Query: 686 gatgttgtagaggttgttcggctccttggtgaactgcaccttggcattgccgttgccgaa 745
|| |||||||||||||| ||||||||| ||||||| |||||||| |||| |||||||||
Sbjct: 175 gacattgtagaggttgttgggctccttgctgaactgtaccttggcgttgctgttgccgaa 116
Query: 746 ctgcttcacaaggaaggagttgttcttcctcacaacctgccagatcagatcccctggaac 805
|||||| | | |||| ||||||||||| |||| | || ||||| |||| || |||||
Sbjct: 115 ctgcttgatcaagaagcagttgttcttcttcacgagctcccagaccagagatcccggaac 56
Query: 806 ggttgccatttcccttcgccggagaagaggt-gccgcggcgtcgcctcgctctg 858
||| | |||||||||| |||||||| ||||| ||||||||| ||||| ||||||
Sbjct: 55 ggtagtcatttcccttggccggagatgaggtcgccgcggcgccgccttgctctg 2
>gb|BU968883.1|BU968883 HB08O03r BC Hordeum vulgare subsp. vulgare cDNA clone HB08O03
5-PRIME, mRNA sequence
Length = 612
Score = 333 bits (168), Expect = 6e-090
Identities = 399/474 (84%), Gaps = 4/474 (0%)
Strand = Plus / Minus
Query: 389 ctgcctgttcttcttcttgacaccggacttggcaacctggaggctgaggtacaccgagct 448
||||||||||||||||||||| || ||||||| ||||||||||||| ||||||| | |||
Sbjct: 506 ctgcctgttcttcttcttgaccccagacttggaaacctggaggctgcggtacactgcgct 447
Query: 449 cagcctagcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctggtt 508
|||||| ||||| || ||||||||||| |||||||||||||||||||| | ||||||||
Sbjct: 446 cagccttgcaagggccggcttggtcaggtcaggcctgtagtagttgtcgcatacctggtt 387
Query: 509 tttcacagccttggccatcttgcggaactccttgcgcatcacagacttgtggctgagctt 568
|| |||| |||||||||||||||||||||||||||||||| || |||||| ||||||
Sbjct: 386 cttgacagacttggccatcttgcggaactccttgcgcatcagagtcttgtgctggagctt 327
Query: 569 cgcaggtgcgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt-- 626
||||| | ||||||||||||||||||||| || || ||||| |||||| ||||| |
Sbjct: 326 ggcaggggtgttctgcttcttggtcttggtcgtggacaggacgacagccttgtcctctcc 267
Query: 627 -gcagctggctggatcgtcacagtcttcttgttcgccaaacccgagtgtttgaaggagtg 685
|| | |||||||| | ||| ||||| |||||||||| |||||| ||| |||||||
Sbjct: 266 cgctgatggctggacagccacggtcttgctgttcgccaagcccgagaacttgtaggagtg 207
Query: 686 gatgttgtagaggttgttcggctccttggtgaactgcaccttggcattgccgttgccgaa 745
|| |||||||||||||| ||||||||| ||||||| |||||||| |||| |||||||||
Sbjct: 206 gacattgtagaggttgttgggctccttgctgaactgtaccttggcgttgctgttgccgaa 147
Query: 746 ctgcttcacaaggaaggagttgttcttcctcacaacctgccagatcagatcccctggaac 805
|||||| | | |||| ||||||||||| |||| | || ||||| |||| || |||||
Sbjct: 146 ctgcttgatcaagaagcagttgttcttcttcacgagctcccagaccagagatcccggaac 87
Query: 806 ggttgccatttcccttcgccggagaagaggt-gccgcggcgtcgcctcgctctg 858
||| | |||||||||| |||||||| ||||| ||||||||| ||||| ||||||
Sbjct: 86 ggtagtcatttcccttggccggagatgaggtcgccgcggcgccgccttgctctg 33
>gb|BU981711.1|BU981711 HA24G15r HA Hordeum vulgare subsp. vulgare cDNA clone HA24G15
5-PRIME, mRNA sequence
Length = 580
Score = 333 bits (168), Expect = 6e-090
Identities = 399/474 (84%), Gaps = 4/474 (0%)
Strand = Plus / Minus
Query: 389 ctgcctgttcttcttcttgacaccggacttggcaacctggaggctgaggtacaccgagct 448
||||||||||||||||||||| || ||||||| ||||||||||||| ||||||| | |||
Sbjct: 499 ctgcctgttcttcttcttgaccccagacttggaaacctggaggctgcggtacactgcgct 440
Query: 449 cagcctagcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctggtt 508
|||||| ||||| || ||||||||||| |||||||||||||||||||| | ||||||||
Sbjct: 439 cagccttgcaagggccggcttggtcaggtcaggcctgtagtagttgtcgcatacctggtt 380
Query: 509 tttcacagccttggccatcttgcggaactccttgcgcatcacagacttgtggctgagctt 568
|| |||| |||||||||||||||||||||||||||||||| || |||||| ||||||
Sbjct: 379 cttgacagacttggccatcttgcggaactccttgcgcatcagagtcttgtgctggagctt 320
Query: 569 cgcaggtgcgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt-- 626
||||| | ||||||||||||||||||||| || || ||||| |||||| ||||| |
Sbjct: 319 ggcaggggtgttctgcttcttggtcttggtcgtggacaggacgacagccttgtcctctcc 260
Query: 627 -gcagctggctggatcgtcacagtcttcttgttcgccaaacccgagtgtttgaaggagtg 685
|| | |||||||| | ||| ||||| |||||||||| |||||| ||| |||||||
Sbjct: 259 cgctgatggctggacagccacggtcttgctgttcgccaagcccgagaacttgtaggagtg 200
Query: 686 gatgttgtagaggttgttcggctccttggtgaactgcaccttggcattgccgttgccgaa 745
|| |||||||||||||| ||||||||| ||||||| |||||||| |||| |||||||||
Sbjct: 199 gacattgtagaggttgttgggctccttgctgaactgtaccttggcgttgctgttgccgaa 140
Query: 746 ctgcttcacaaggaaggagttgttcttcctcacaacctgccagatcagatcccctggaac 805
|||||| | | |||| ||||||||||| |||| | || ||||| |||| || |||||
Sbjct: 139 ctgcttgatcaagaagcagttgttcttcttcacgagctcccagaccagagatcccggaac 80
Query: 806 ggttgccatttcccttcgccggagaagaggt-gccgcggcgtcgcctcgctctg 858
||| | |||||||||| |||||||| ||||| ||||||||| ||||| ||||||
Sbjct: 79 ggtagtcatttcccttggccggagatgaggtcgccgcggcgccgccttgctctg 26
>gb|BU983978.1|BU983978 HA31J22r HA Hordeum vulgare subsp. vulgare cDNA clone HA31J22
5-PRIME, mRNA sequence
Length = 522
Score = 333 bits (168), Expect = 6e-090
Identities = 399/474 (84%), Gaps = 4/474 (0%)
Strand = Plus / Minus
Query: 389 ctgcctgttcttcttcttgacaccggacttggcaacctggaggctgaggtacaccgagct 448
||||||||||||||||||||| || ||||||| ||||||||||||| ||||||| | |||
Sbjct: 500 ctgcctgttcttcttcttgaccccagacttggaaacctggaggctgcggtacactgcgct 441
Query: 449 cagcctagcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctggtt 508
|||||| ||||| || ||||||||||| |||||||||||||||||||| | ||||||||
Sbjct: 440 cagccttgcaagggccggcttggtcaggtcaggcctgtagtagttgtcgcatacctggtt 381
Query: 509 tttcacagccttggccatcttgcggaactccttgcgcatcacagacttgtggctgagctt 568
|| |||| |||||||||||||||||||||||||||||||| || |||||| ||||||
Sbjct: 380 cttgacagacttggccatcttgcggaactccttgcgcatcagagtcttgtgctggagctt 321
Query: 569 cgcaggtgcgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt-- 626
||||| | ||||||||||||||||||||| || || ||||| |||||| ||||| |
Sbjct: 320 ggcaggggtgttctgcttcttggtcttggtcgtggacaggacgacagccttgtcctctcc 261
Query: 627 -gcagctggctggatcgtcacagtcttcttgttcgccaaacccgagtgtttgaaggagtg 685
|| | |||||||| | ||| ||||| |||||||||| |||||| ||| |||||||
Sbjct: 260 cgctgatggctggacagccacggtcttgctgttcgccaagcccgagaacttgtaggagtg 201
Query: 686 gatgttgtagaggttgttcggctccttggtgaactgcaccttggcattgccgttgccgaa 745
|| |||||||||||||| ||||||||| ||||||| |||||||| |||| |||||||||
Sbjct: 200 gacattgtagaggttgttgggctccttgctgaactgtaccttggcgttgctgttgccgaa 141
Query: 746 ctgcttcacaaggaaggagttgttcttcctcacaacctgccagatcagatcccctggaac 805
|||||| | | |||| ||||||||||| |||| | || ||||| |||| || |||||
Sbjct: 140 ctgcttgatcaagaagcagttgttcttcttcacgagctcccagaccagagatcccggaac 81
Query: 806 ggttgccatttcccttcgccggagaagaggt-gccgcggcgtcgcctcgctctg 858
||| | |||||||||| |||||||| ||||| ||||||||| ||||| ||||||
Sbjct: 80 ggtagtcatttcccttggccggagatgaggtcgccgcggcgccgccttgctctg 27
>gb|BU988528.1|BU988528 HF17O10r HF Hordeum vulgare subsp. vulgare cDNA clone HF17O10
5-PRIME, mRNA sequence
Length = 483
Score = 333 bits (168), Expect = 6e-090
Identities = 399/474 (84%), Gaps = 4/474 (0%)
Strand = Plus / Minus
Query: 389 ctgcctgttcttcttcttgacaccggacttggcaacctggaggctgaggtacaccgagct 448
||||||||||||||||||||| || ||||||| ||||||||||||| ||||||| | |||
Sbjct: 483 ctgcctgttcttcttcttgaccccagacttggaaacctggaggctgcggtacactgcgct 424
Query: 449 cagcctagcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctggtt 508
|||||| ||||| || ||||||||||| |||||||||||||||||||| | ||||||||
Sbjct: 423 cagccttgcaagggccggcttggtcaggtcaggcctgtagtagttgtcgcatacctggtt 364
Query: 509 tttcacagccttggccatcttgcggaactccttgcgcatcacagacttgtggctgagctt 568
|| |||| |||||||||||||||||||||||||||||||| || |||||| ||||||
Sbjct: 363 cttgacagacttggccatcttgcggaactccttgcgcatcagagtcttgtgctggagctt 304
Query: 569 cgcaggtgcgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt-- 626
||||| | ||||||||||||||||||||| || || ||||| |||||| ||||| |
Sbjct: 303 ggcaggggtgttctgcttcttggtcttggtcgtggacaggacgacagccttgtcctctcc 244
Query: 627 -gcagctggctggatcgtcacagtcttcttgttcgccaaacccgagtgtttgaaggagtg 685
|| | |||||||| | ||| ||||| |||||||||| |||||| ||| |||||||
Sbjct: 243 cgctgatggctggacagccacggtcttgctgttcgccaagcccgagaacttgtaggagtg 184
Query: 686 gatgttgtagaggttgttcggctccttggtgaactgcaccttggcattgccgttgccgaa 745
|| |||||||||||||| ||||||||| ||||||| |||||||| |||| |||||||||
Sbjct: 183 gacattgtagaggttgttgggctccttgctgaactgtaccttggcgttgctgttgccgaa 124
Query: 746 ctgcttcacaaggaaggagttgttcttcctcacaacctgccagatcagatcccctggaac 805
|||||| | | |||| ||||||||||| |||| | || ||||| |||| || |||||
Sbjct: 123 ctgcttgatcaagaagcagttgttcttcttcacgagctcccagaccagagatcccggaac 64
Query: 806 ggttgccatttcccttcgccggagaagaggt-gccgcggcgtcgcctcgctctg 858
||| | |||||||||| |||||||| ||||| ||||||||| ||||| ||||||
Sbjct: 63 ggtagtcatttcccttggccggagatgaggtcgccgcggcgccgccttgctctg 10
>gb|BU988657.1|BU988657 HF18F03r HF Hordeum vulgare subsp. vulgare cDNA clone HF18F03
5-PRIME, mRNA sequence
Length = 573
Score = 333 bits (168), Expect = 6e-090
Identities = 399/474 (84%), Gaps = 4/474 (0%)
Strand = Plus / Minus
Query: 389 ctgcctgttcttcttcttgacaccggacttggcaacctggaggctgaggtacaccgagct 448
||||||||||||||||||||| || ||||||| ||||||||||||| ||||||| | |||
Sbjct: 483 ctgcctgttcttcttcttgaccccagacttggaaacctggaggctgcggtacactgcgct 424
Query: 449 cagcctagcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctggtt 508
|||||| ||||| || ||||||||||| |||||||||||||||||||| | ||||||||
Sbjct: 423 cagccttgcaagggccggcttggtcaggtcaggcctgtagtagttgtcgcatacctggtt 364
Query: 509 tttcacagccttggccatcttgcggaactccttgcgcatcacagacttgtggctgagctt 568
|| |||| |||||||||||||||||||||||||||||||| || |||||| ||||||
Sbjct: 363 cttgacagacttggccatcttgcggaactccttgcgcatcagagtcttgtgctggagctt 304
Query: 569 cgcaggtgcgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt-- 626
||||| | ||||||||||||||||||||| || || ||||| |||||| ||||| |
Sbjct: 303 ggcaggggtgttctgcttcttggtcttggtcgtggacaggacgacagccttgtcctctcc 244
Query: 627 -gcagctggctggatcgtcacagtcttcttgttcgccaaacccgagtgtttgaaggagtg 685
|| | |||||||| | ||| ||||| |||||||||| |||||| ||| |||||||
Sbjct: 243 cgctgatggctggacagccacggtcttgctgttcgccaagcccgagaacttgtaggagtg 184
Query: 686 gatgttgtagaggttgttcggctccttggtgaactgcaccttggcattgccgttgccgaa 745
|| |||||||||||||| ||||||||| ||||||| |||||||| |||| |||||||||
Sbjct: 183 gacattgtagaggttgttgggctccttgctgaactgtaccttggcgttgctgttgccgaa 124
Query: 746 ctgcttcacaaggaaggagttgttcttcctcacaacctgccagatcagatcccctggaac 805
|||||| | | |||| ||||||||||| |||| | || ||||| |||| || |||||
Sbjct: 123 ctgcttgatcaagaagcagttgttcttcttcacgagctcccagaccagagatcccggaac 64
Query: 806 ggttgccatttcccttcgccggagaagaggt-gccgcggcgtcgcctcgctctg 858
||| | |||||||||| |||||||| ||||| ||||||||| ||||| ||||||
Sbjct: 63 ggtagtcatttcccttggccggagatgaggtcgccgcggcgccgccttgctctg 10
>gb|BU988764.1|BU988764 HF18K08r HF Hordeum vulgare subsp. vulgare cDNA clone HF18K08
5-PRIME, mRNA sequence
Length = 547
Score = 333 bits (168), Expect = 6e-090
Identities = 399/474 (84%), Gaps = 4/474 (0%)
Strand = Plus / Minus
Query: 389 ctgcctgttcttcttcttgacaccggacttggcaacctggaggctgaggtacaccgagct 448
||||||||||||||||||||| || ||||||| ||||||||||||| ||||||| | |||
Sbjct: 491 ctgcctgttcttcttcttgaccccagacttggaaacctggaggctgcggtacactgcgct 432
Query: 449 cagcctagcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctggtt 508
|||||| ||||| || ||||||||||| |||||||||||||||||||| | ||||||||
Sbjct: 431 cagccttgcaagggccggcttggtcaggtcaggcctgtagtagttgtcgcatacctggtt 372
Query: 509 tttcacagccttggccatcttgcggaactccttgcgcatcacagacttgtggctgagctt 568
|| |||| |||||||||||||||||||||||||||||||| || |||||| ||||||
Sbjct: 371 cttgacagacttggccatcttgcggaactccttgcgcatcagagtcttgtgctggagctt 312
Query: 569 cgcaggtgcgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt-- 626
||||| | ||||||||||||||||||||| || || ||||| |||||| ||||| |
Sbjct: 311 ggcaggggtgttctgcttcttggtcttggtcgtggacaggacgacagccttgtcctctcc 252
Query: 627 -gcagctggctggatcgtcacagtcttcttgttcgccaaacccgagtgtttgaaggagtg 685
|| | |||||||| | ||| ||||| |||||||||| |||||| ||| |||||||
Sbjct: 251 cgctgatggctggacagccacggtcttgctgttcgccaagcccgagaacttgtaggagtg 192
Query: 686 gatgttgtagaggttgttcggctccttggtgaactgcaccttggcattgccgttgccgaa 745
|| |||||||||||||| ||||||||| ||||||| |||||||| |||| |||||||||
Sbjct: 191 gacattgtagaggttgttgggctccttgctgaactgtaccttggcgttgctgttgccgaa 132
Query: 746 ctgcttcacaaggaaggagttgttcttcctcacaacctgccagatcagatcccctggaac 805
|||||| | | |||| ||||||||||| |||| | || ||||| |||| || |||||
Sbjct: 131 ctgcttgatcaagaagcagttgttcttcttcacgagctcccagaccagagatcccggaac 72
Query: 806 ggttgccatttcccttcgccggagaagaggt-gccgcggcgtcgcctcgctctg 858
||| | |||||||||| |||||||| ||||| ||||||||| ||||| ||||||
Sbjct: 71 ggtagtcatttcccttggccggagatgaggtcgccgcggcgccgccttgctctg 18
>gb|BU990202.1|BU990202 HF24G03r HF Hordeum vulgare subsp. vulgare cDNA clone HF24G03
5-PRIME, mRNA sequence
Length = 620
Score = 333 bits (168), Expect = 6e-090
Identities = 399/474 (84%), Gaps = 4/474 (0%)
Strand = Plus / Minus
Query: 389 ctgcctgttcttcttcttgacaccggacttggcaacctggaggctgaggtacaccgagct 448
||||||||||||||||||||| || ||||||| ||||||||||||| ||||||| | |||
Sbjct: 490 ctgcctgttcttcttcttgaccccagacttggaaacctggaggctgcggtacactgcgct 431
Query: 449 cagcctagcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctggtt 508
|||||| ||||| || ||||||||||| |||||||||||||||||||| | ||||||||
Sbjct: 430 cagccttgcaagggccggcttggtcaggtcaggcctgtagtagttgtcgcatacctggtt 371
Query: 509 tttcacagccttggccatcttgcggaactccttgcgcatcacagacttgtggctgagctt 568
|| |||| |||||||||||||||||||||||||||||||| || |||||| ||||||
Sbjct: 370 cttgacagacttggccatcttgcggaactccttgcgcatcagagtcttgtgctggagctt 311
Query: 569 cgcaggtgcgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt-- 626
||||| | ||||||||||||||||||||| || || ||||| |||||| ||||| |
Sbjct: 310 ggcaggggtgttctgcttcttggtcttggtcgtggacaggacgacagccttgtcctctcc 251
Query: 627 -gcagctggctggatcgtcacagtcttcttgttcgccaaacccgagtgtttgaaggagtg 685
|| | |||||||| | ||| ||||| |||||||||| |||||| ||| |||||||
Sbjct: 250 cgctgatggctggacagccacggtcttgctgttcgccaagcccgagaacttgtaggagtg 191
Query: 686 gatgttgtagaggttgttcggctccttggtgaactgcaccttggcattgccgttgccgaa 745
|| |||||||||||||| ||||||||| ||||||| |||||||| |||| |||||||||
Sbjct: 190 gacattgtagaggttgttgggctccttgctgaactgtaccttggcgttgctgttgccgaa 131
Query: 746 ctgcttcacaaggaaggagttgttcttcctcacaacctgccagatcagatcccctggaac 805
|||||| | | |||| ||||||||||| |||| | || ||||| |||| || |||||
Sbjct: 130 ctgcttgatcaagaagcagttgttcttcttcacgagctcccagaccagagatcccggaac 71
Query: 806 ggttgccatttcccttcgccggagaagaggt-gccgcggcgtcgcctcgctctg 858
||| | |||||||||| |||||||| ||||| ||||||||| ||||| ||||||
Sbjct: 70 ggtagtcatttcccttggccggagatgaggtcgccgcggcgccgccttgctctg 17
>gb|CA024600.1|CA024600 HZ49M08r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ49M08
5-PRIME, mRNA sequence
Length = 602
Score = 333 bits (168), Expect = 6e-090
Identities = 399/474 (84%), Gaps = 4/474 (0%)
Strand = Plus / Minus
Query: 389 ctgcctgttcttcttcttgacaccggacttggcaacctggaggctgaggtacaccgagct 448
||||||||||||||||||||| || ||||||| ||||||||||||| ||||||| | |||
Sbjct: 496 ctgcctgttcttcttcttgaccccagacttggaaacctggaggctgcggtacactgcgct 437
Query: 449 cagcctagcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctggtt 508
|||||| ||||| || ||||||||||| |||||||||||||||||||| | ||||||||
Sbjct: 436 cagccttgcaagggccggcttggtcaggtcaggcctgtagtagttgtcgcatacctggtt 377
Query: 509 tttcacagccttggccatcttgcggaactccttgcgcatcacagacttgtggctgagctt 568
|| |||| |||||||||||||||||||||||||||||||| || |||||| ||||||
Sbjct: 376 cttgacagacttggccatcttgcggaactccttgcgcatcagagtcttgtgctggagctt 317
Query: 569 cgcaggtgcgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt-- 626
||||| | ||||||||||||||||||||| || || ||||| |||||| ||||| |
Sbjct: 316 ggcaggggtgttctgcttcttggtcttggtcgtggacaggacgacagccttgtcctctcc 257
Query: 627 -gcagctggctggatcgtcacagtcttcttgttcgccaaacccgagtgtttgaaggagtg 685
|| | |||||||| | ||| ||||| |||||||||| |||||| ||| |||||||
Sbjct: 256 cgctgatggctggacagccacggtcttgctgttcgccaagcccgagaacttgtaggagtg 197
Query: 686 gatgttgtagaggttgttcggctccttggtgaactgcaccttggcattgccgttgccgaa 745
|| |||||||||||||| ||||||||| ||||||| |||||||| |||| |||||||||
Sbjct: 196 gacattgtagaggttgttgggctccttgctgaactgtaccttggcgttgctgttgccgaa 137
Query: 746 ctgcttcacaaggaaggagttgttcttcctcacaacctgccagatcagatcccctggaac 805
|||||| | | |||| ||||||||||| |||| | || ||||| |||| || |||||
Sbjct: 136 ctgcttgatcaagaagcagttgttcttcttcacgagctcccagaccagagatcccggaac 77
Query: 806 ggttgccatttcccttcgccggagaagaggt-gccgcggcgtcgcctcgctctg 858
||| | |||||||||| |||||||| ||||| ||||||||| ||||| ||||||
Sbjct: 76 ggtagtcatttcccttggccggagatgaggtcgccgcggcgccgccttgctctg 23
>gb|CV056251.1|CV056251 BNEL15F3 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL15F3 5' similar to putative 60S
ribosomal L28 protein, mRNA sequence
Length = 583
Score = 333 bits (168), Expect = 6e-090
Identities = 399/474 (84%), Gaps = 4/474 (0%)
Strand = Plus / Minus
Query: 389 ctgcctgttcttcttcttgacaccggacttggcaacctggaggctgaggtacaccgagct 448
||||||||||||||||||||| || ||||||| ||||||||||||| ||||||| | |||
Sbjct: 486 ctgcctgttcttcttcttgaccccagacttggaaacctggaggctgcggtacactgcgct 427
Query: 449 cagcctagcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctggtt 508
|||||| ||||| || ||||||||||| |||||||||||||||||||| | ||||||||
Sbjct: 426 cagccttgcaagggccggcttggtcaggtcaggcctgtagtagttgtcgcatacctggtt 367
Query: 509 tttcacagccttggccatcttgcggaactccttgcgcatcacagacttgtggctgagctt 568
|| |||| |||||||||||||||||||||||||||||||| || |||||| ||||||
Sbjct: 366 cttgacagacttggccatcttgcggaactccttgcgcatcagagtcttgtgctggagctt 307
Query: 569 cgcaggtgcgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt-- 626
||||| | ||||||||||||||||||||| || || ||||| |||||| ||||| |
Sbjct: 306 ggcaggggtgttctgcttcttggtcttggtcgtggacaggacgacagccttgtcctctcc 247
Query: 627 -gcagctggctggatcgtcacagtcttcttgttcgccaaacccgagtgtttgaaggagtg 685
|| | |||||||| | ||| ||||| |||||||||| |||||| ||| |||||||
Sbjct: 246 cgctgatggctggacagccacggtcttgctgttcgccaagcccgagaacttgtaggagtg 187
Query: 686 gatgttgtagaggttgttcggctccttggtgaactgcaccttggcattgccgttgccgaa 745
|| |||||||||||||| ||||||||| ||||||| |||||||| |||| |||||||||
Sbjct: 186 gacattgtagaggttgttgggctccttgctgaactgtaccttggcgttgctgttgccgaa 127
Query: 746 ctgcttcacaaggaaggagttgttcttcctcacaacctgccagatcagatcccctggaac 805
|||||| | | |||| ||||||||||| |||| | || ||||| |||| || |||||
Sbjct: 126 ctgcttgatcaagaagcagttgttcttcttcacgagctcccagaccagagatcccggaac 67
Query: 806 ggttgccatttcccttcgccggagaagaggt-gccgcggcgtcgcctcgctctg 858
||| | |||||||||| |||||||| ||||| ||||||||| ||||| ||||||
Sbjct: 66 ggtagtcatttcccttggccggagatgaggtcgccgcggcgccgccttgctctg 13
>gb|CV057878.1|CV057878 BNEL31g9 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL31g9 5' similar to putative 60S
ribosomal L28 protein, mRNA sequence
Length = 595
Score = 333 bits (168), Expect = 6e-090
Identities = 399/474 (84%), Gaps = 4/474 (0%)
Strand = Plus / Minus
Query: 389 ctgcctgttcttcttcttgacaccggacttggcaacctggaggctgaggtacaccgagct 448
||||||||||||||||||||| || ||||||| ||||||||||||| ||||||| | |||
Sbjct: 490 ctgcctgttcttcttcttgaccccagacttggaaacctggaggctgcggtacactgcgct 431
Query: 449 cagcctagcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctggtt 508
|||||| ||||| || ||||||||||| |||||||||||||||||||| | ||||||||
Sbjct: 430 cagccttgcaagggccggcttggtcaggtcaggcctgtagtagttgtcgcatacctggtt 371
Query: 509 tttcacagccttggccatcttgcggaactccttgcgcatcacagacttgtggctgagctt 568
|| |||| |||||||||||||||||||||||||||||||| || |||||| ||||||
Sbjct: 370 cttgacagacttggccatcttgcggaactccttgcgcatcagagtcttgtgctggagctt 311
Query: 569 cgcaggtgcgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt-- 626
||||| | ||||||||||||||||||||| || || ||||| |||||| ||||| |
Sbjct: 310 ggcaggggtgttctgcttcttggtcttggtcgtggacaggacgacagccttgtcctctcc 251
Query: 627 -gcagctggctggatcgtcacagtcttcttgttcgccaaacccgagtgtttgaaggagtg 685
|| | |||||||| | ||| ||||| |||||||||| |||||| ||| |||||||
Sbjct: 250 cgctgatggctggacagccacggtcttgctgttcgccaagcccgagaacttgtaggagtg 191
Query: 686 gatgttgtagaggttgttcggctccttggtgaactgcaccttggcattgccgttgccgaa 745
|| |||||||||||||| ||||||||| ||||||| |||||||| |||| |||||||||
Sbjct: 190 gacattgtagaggttgttgggctccttgctgaactgtaccttggcgttgctgttgccgaa 131
Query: 746 ctgcttcacaaggaaggagttgttcttcctcacaacctgccagatcagatcccctggaac 805
|||||| | | |||| ||||||||||| |||| | || ||||| |||| || |||||
Sbjct: 130 ctgcttgatcaagaagcagttgttcttcttcacgagctcccagaccagagatcccggaac 71
Query: 806 ggttgccatttcccttcgccggagaagaggt-gccgcggcgtcgcctcgctctg 858
||| | |||||||||| |||||||| ||||| ||||||||| ||||| ||||||
Sbjct: 70 ggtagtcatttcccttggccggagatgaggtcgccgcggcgccgccttgctctg 17
>gb|CV061292.1|CV061292 BNEL67b3 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL67b3 5' similar to putative 60S
ribosomal L28 protein, mRNA sequence
Length = 627
Score = 333 bits (168), Expect = 6e-090
Identities = 399/474 (84%), Gaps = 4/474 (0%)
Strand = Plus / Minus
Query: 389 ctgcctgttcttcttcttgacaccggacttggcaacctggaggctgaggtacaccgagct 448
||||||||||||||||||||| || ||||||| ||||||||||||| ||||||| | |||
Sbjct: 479 ctgcctgttcttcttcttgaccccagacttggaaacctggaggctgcggtacactgcgct 420
Query: 449 cagcctagcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctggtt 508
|||||| ||||| || ||||||||||| |||||||||||||||||||| | ||||||||
Sbjct: 419 cagccttgcaagggccggcttggtcaggtcaggcctgtagtagttgtcgcatacctggtt 360
Query: 509 tttcacagccttggccatcttgcggaactccttgcgcatcacagacttgtggctgagctt 568
|| |||| |||||||||||||||||||||||||||||||| || |||||| ||||||
Sbjct: 359 cttgacagacttggccatcttgcggaactccttgcgcatcagagtcttgtgctggagctt 300
Query: 569 cgcaggtgcgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt-- 626
||||| | ||||||||||||||||||||| || || ||||| |||||| ||||| |
Sbjct: 299 ggcaggggtgttctgcttcttggtcttggtcgtggacaggacgacagccttgtcctctcc 240
Query: 627 -gcagctggctggatcgtcacagtcttcttgttcgccaaacccgagtgtttgaaggagtg 685
|| | |||||||| | ||| ||||| |||||||||| |||||| ||| |||||||
Sbjct: 239 cgctgatggctggacagccacggtcttgctgttcgccaagcccgagaacttgtaggagtg 180
Query: 686 gatgttgtagaggttgttcggctccttggtgaactgcaccttggcattgccgttgccgaa 745
|| |||||||||||||| ||||||||| ||||||| |||||||| |||| |||||||||
Sbjct: 179 gacattgtagaggttgttgggctccttgctgaactgtaccttggcgttgctgttgccgaa 120
Query: 746 ctgcttcacaaggaaggagttgttcttcctcacaacctgccagatcagatcccctggaac 805
|||||| | | |||| ||||||||||| |||| | || ||||| |||| || |||||
Sbjct: 119 ctgcttgatcaagaagcagttgttcttcttcacgagctcccagaccagagatcccggaac 60
Query: 806 ggttgccatttcccttcgccggagaagaggt-gccgcggcgtcgcctcgctctg 858
||| | |||||||||| |||||||| ||||| ||||||||| ||||| ||||||
Sbjct: 59 ggtagtcatttcccttggccggagatgaggtcgccgcggcgccgccttgctctg 6
>gb|CV064057.1|CV064057 BNEL96h4 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL96h4 5' similar to putative 60S
ribosomal L28 protein, mRNA sequence
Length = 623
Score = 333 bits (168), Expect = 6e-090
Identities = 399/474 (84%), Gaps = 4/474 (0%)
Strand = Plus / Minus
Query: 389 ctgcctgttcttcttcttgacaccggacttggcaacctggaggctgaggtacaccgagct 448
||||||||||||||||||||| || ||||||| ||||||||||||| ||||||| | |||
Sbjct: 486 ctgcctgttcttcttcttgaccccagacttggaaacctggaggctgcggtacactgcgct 427
Query: 449 cagcctagcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctggtt 508
|||||| ||||| || ||||||||||| |||||||||||||||||||| | ||||||||
Sbjct: 426 cagccttgcaagggccggcttggtcaggtcaggcctgtagtagttgtcgcatacctggtt 367
Query: 509 tttcacagccttggccatcttgcggaactccttgcgcatcacagacttgtggctgagctt 568
|| |||| |||||||||||||||||||||||||||||||| || |||||| ||||||
Sbjct: 366 cttgacagacttggccatcttgcggaactccttgcgcatcagagtcttgtgctggagctt 307
Query: 569 cgcaggtgcgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt-- 626
||||| | ||||||||||||||||||||| || || ||||| |||||| ||||| |
Sbjct: 306 ggcaggggtgttctgcttcttggtcttggtcgtggacaggacgacagccttgtcctctcc 247
Query: 627 -gcagctggctggatcgtcacagtcttcttgttcgccaaacccgagtgtttgaaggagtg 685
|| | |||||||| | ||| ||||| |||||||||| |||||| ||| |||||||
Sbjct: 246 cgctgatggctggacagccacggtcttgctgttcgccaagcccgagaacttgtaggagtg 187
Query: 686 gatgttgtagaggttgttcggctccttggtgaactgcaccttggcattgccgttgccgaa 745
|| |||||||||||||| ||||||||| ||||||| |||||||| |||| |||||||||
Sbjct: 186 gacattgtagaggttgttgggctccttgctgaactgtaccttggcgttgctgttgccgaa 127
Query: 746 ctgcttcacaaggaaggagttgttcttcctcacaacctgccagatcagatcccctggaac 805
|||||| | | |||| ||||||||||| |||| | || ||||| |||| || |||||
Sbjct: 126 ctgcttgatcaagaagcagttgttcttcttcacgagctcccagaccagagatcccggaac 67
Query: 806 ggttgccatttcccttcgccggagaagaggt-gccgcggcgtcgcctcgctctg 858
||| | |||||||||| |||||||| ||||| ||||||||| ||||| ||||||
Sbjct: 66 ggtagtcatttcccttggccggagatgaggtcgccgcggcgccgccttgctctg 13
>gb|CK122869.1|CK122869 BES1824106g21 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010G216 5-PRIME, mRNA sequence
Length = 673
Score = 333 bits (168), Expect = 6e-090
Identities = 399/474 (84%), Gaps = 4/474 (0%)
Strand = Plus / Minus
Query: 389 ctgcctgttcttcttcttgacaccggacttggcaacctggaggctgaggtacaccgagct 448
||||||||||||||||||||| || ||||||| ||||||||||||| ||||||| | |||
Sbjct: 495 ctgcctgttcttcttcttgaccccagacttggaaacctggaggctgcggtacactgcgct 436
Query: 449 cagcctagcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctggtt 508
|||||| ||||| || ||||||||||| |||||||||||||||||||| | ||||||||
Sbjct: 435 cagccttgcaagggccggcttggtcaggtcaggcctgtagtagttgtcgcatacctggtt 376
Query: 509 tttcacagccttggccatcttgcggaactccttgcgcatcacagacttgtggctgagctt 568
|| |||| |||||||||||||||||||||||||||||||| || |||||| ||||||
Sbjct: 375 cttgacagacttggccatcttgcggaactccttgcgcatcagagtcttgtgctggagctt 316
Query: 569 cgcaggtgcgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt-- 626
||||| | ||||||||||||||||||||| || || ||||| |||||| ||||| |
Sbjct: 315 ggcaggggtgttctgcttcttggtcttggtcgtggacaggacgacagccttgtcctctcc 256
Query: 627 -gcagctggctggatcgtcacagtcttcttgttcgccaaacccgagtgtttgaaggagtg 685
|| | |||||||| | ||| ||||| |||||||||| |||||| ||| |||||||
Sbjct: 255 cgctgatggctggacagccacggtcttgctgttcgccaagcccgagaacttgtaggagtg 196
Query: 686 gatgttgtagaggttgttcggctccttggtgaactgcaccttggcattgccgttgccgaa 745
|| |||||||||||||| ||||||||| ||||||| |||||||| |||| |||||||||
Sbjct: 195 gacattgtagaggttgttgggctccttgctgaactgtaccttggcgttgctgttgccgaa 136
Query: 746 ctgcttcacaaggaaggagttgttcttcctcacaacctgccagatcagatcccctggaac 805
|||||| | | |||| ||||||||||| |||| | || ||||| |||| || |||||
Sbjct: 135 ctgcttgatcaagaagcagttgttcttcttcacgagctcccagaccagagatcccggaac 76
Query: 806 ggttgccatttcccttcgccggagaagaggt-gccgcggcgtcgcctcgctctg 858
||| | |||||||||| |||||||| ||||| ||||||||| ||||| ||||||
Sbjct: 75 ggtagtcatttcccttggccggagatgaggtcgccgcggcgccgccttgctctg 22
>gb|CK124871.1|CK124871 BES1824110k21 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010K2110 5-PRIME, mRNA sequence
Length = 586
Score = 333 bits (168), Expect = 6e-090
Identities = 399/474 (84%), Gaps = 4/474 (0%)
Strand = Plus / Minus
Query: 389 ctgcctgttcttcttcttgacaccggacttggcaacctggaggctgaggtacaccgagct 448
||||||||||||||||||||| || ||||||| ||||||||||||| ||||||| | |||
Sbjct: 496 ctgcctgttcttcttcttgaccccagacttggaaacctggaggctgcggtacactgcgct 437
Query: 449 cagcctagcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctggtt 508
|||||| ||||| || ||||||||||| |||||||||||||||||||| | ||||||||
Sbjct: 436 cagccttgcaagggccggcttggtcaggtcaggcctgtagtagttgtcgcatacctggtt 377
Query: 509 tttcacagccttggccatcttgcggaactccttgcgcatcacagacttgtggctgagctt 568
|| |||| |||||||||||||||||||||||||||||||| || |||||| ||||||
Sbjct: 376 cttgacagacttggccatcttgcggaactccttgcgcatcagagtcttgtgctggagctt 317
Query: 569 cgcaggtgcgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt-- 626
||||| | ||||||||||||||||||||| || || ||||| |||||| ||||| |
Sbjct: 316 ggcaggggtgttctgcttcttggtcttggtcgtggacaggacgacagccttgtcctctcc 257
Query: 627 -gcagctggctggatcgtcacagtcttcttgttcgccaaacccgagtgtttgaaggagtg 685
|| | |||||||| | ||| ||||| |||||||||| |||||| ||| |||||||
Sbjct: 256 cgctgatggctggacagccacggtcttgctgttcgccaagcccgagaacttgtaggagtg 197
Query: 686 gatgttgtagaggttgttcggctccttggtgaactgcaccttggcattgccgttgccgaa 745
|| |||||||||||||| ||||||||| ||||||| |||||||| |||| |||||||||
Sbjct: 196 gacattgtagaggttgttgggctccttgctgaactgtaccttggcgttgctgttgccgaa 137
Query: 746 ctgcttcacaaggaaggagttgttcttcctcacaacctgccagatcagatcccctggaac 805
|||||| | | |||| ||||||||||| |||| | || ||||| |||| || |||||
Sbjct: 136 ctgcttgatcaagaagcagttgttcttcttcacgagctcccagaccagagatcccggaac 77
Query: 806 ggttgccatttcccttcgccggagaagaggt-gccgcggcgtcgcctcgctctg 858
||| | |||||||||| |||||||| ||||| ||||||||| ||||| ||||||
Sbjct: 76 ggtagtcatttcccttggccggagatgaggtcgccgcggcgccgccttgctctg 23
>gb|CK125547.1|CK125547 BES1824109a09 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010A099 5-PRIME, mRNA sequence
Length = 695
Score = 333 bits (168), Expect = 6e-090
Identities = 399/474 (84%), Gaps = 4/474 (0%)
Strand = Plus / Minus
Query: 389 ctgcctgttcttcttcttgacaccggacttggcaacctggaggctgaggtacaccgagct 448
||||||||||||||||||||| || ||||||| ||||||||||||| ||||||| | |||
Sbjct: 510 ctgcctgttcttcttcttgaccccagacttggaaacctggaggctgcggtacactgcgct 451
Query: 449 cagcctagcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctggtt 508
|||||| ||||| || ||||||||||| |||||||||||||||||||| | ||||||||
Sbjct: 450 cagccttgcaagggccggcttggtcaggtcaggcctgtagtagttgtcgcatacctggtt 391
Query: 509 tttcacagccttggccatcttgcggaactccttgcgcatcacagacttgtggctgagctt 568
|| |||| |||||||||||||||||||||||||||||||| || |||||| ||||||
Sbjct: 390 cttgacagacttggccatcttgcggaactccttgcgcatcagagtcttgtgctggagctt 331
Query: 569 cgcaggtgcgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt-- 626
||||| | ||||||||||||||||||||| || || ||||| |||||| ||||| |
Sbjct: 330 ggcaggggtgttctgcttcttggtcttggtcgtggacaggacgacagccttgtcctctcc 271
Query: 627 -gcagctggctggatcgtcacagtcttcttgttcgccaaacccgagtgtttgaaggagtg 685
|| | |||||||| | ||| ||||| |||||||||| |||||| ||| |||||||
Sbjct: 270 cgctgatggctggacagccacggtcttgctgttcgccaagcccgagaacttgtaggagtg 211
Query: 686 gatgttgtagaggttgttcggctccttggtgaactgcaccttggcattgccgttgccgaa 745
|| |||||||||||||| ||||||||| ||||||| |||||||| |||| |||||||||
Sbjct: 210 gacattgtagaggttgttgggctccttgctgaactgtaccttggcgttgctgttgccgaa 151
Query: 746 ctgcttcacaaggaaggagttgttcttcctcacaacctgccagatcagatcccctggaac 805
|||||| | | |||| ||||||||||| |||| | || ||||| |||| || |||||
Sbjct: 150 ctgcttgatcaagaagcagttgttcttcttcacgagctcccagaccagagatcccggaac 91
Query: 806 ggttgccatttcccttcgccggagaagaggt-gccgcggcgtcgcctcgctctg 858
||| | |||||||||| |||||||| ||||| ||||||||| ||||| ||||||
Sbjct: 90 ggtagtcatttcccttggccggagatgaggtcgccgcggcgccgccttgctctg 37
>gb|CK125663.1|CK125663 BES1824109k10 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010K109 5-PRIME, mRNA sequence
Length = 672
Score = 333 bits (168), Expect = 6e-090
Identities = 399/474 (84%), Gaps = 4/474 (0%)
Strand = Plus / Minus
Query: 389 ctgcctgttcttcttcttgacaccggacttggcaacctggaggctgaggtacaccgagct 448
||||||||||||||||||||| || ||||||| ||||||||||||| ||||||| | |||
Sbjct: 490 ctgcctgttcttcttcttgaccccagacttggaaacctggaggctgcggtacactgcgct 431
Query: 449 cagcctagcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctggtt 508
|||||| ||||| || ||||||||||| |||||||||||||||||||| | ||||||||
Sbjct: 430 cagccttgcaagggccggcttggtcaggtcaggcctgtagtagttgtcgcatacctggtt 371
Query: 509 tttcacagccttggccatcttgcggaactccttgcgcatcacagacttgtggctgagctt 568
|| |||| |||||||||||||||||||||||||||||||| || |||||| ||||||
Sbjct: 370 cttgacagacttggccatcttgcggaactccttgcgcatcagagtcttgtgctggagctt 311
Query: 569 cgcaggtgcgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt-- 626
||||| | ||||||||||||||||||||| || || ||||| |||||| ||||| |
Sbjct: 310 ggcaggggtgttctgcttcttggtcttggtcgtggacaggacgacagccttgtcctctcc 251
Query: 627 -gcagctggctggatcgtcacagtcttcttgttcgccaaacccgagtgtttgaaggagtg 685
|| | |||||||| | ||| ||||| |||||||||| |||||| ||| |||||||
Sbjct: 250 cgctgatggctggacagccacggtcttgctgttcgccaagcccgagaacttgtaggagtg 191
Query: 686 gatgttgtagaggttgttcggctccttggtgaactgcaccttggcattgccgttgccgaa 745
|| |||||||||||||| ||||||||| ||||||| |||||||| |||| |||||||||
Sbjct: 190 gacattgtagaggttgttgggctccttgctgaactgtaccttggcgttgctgttgccgaa 131
Query: 746 ctgcttcacaaggaaggagttgttcttcctcacaacctgccagatcagatcccctggaac 805
|||||| | | |||| ||||||||||| |||| | || ||||| |||| || |||||
Sbjct: 130 ctgcttgatcaagaagcagttgttcttcttcacgagctcccagaccagagatcccggaac 71
Query: 806 ggttgccatttcccttcgccggagaagaggt-gccgcggcgtcgcctcgctctg 858
||| | |||||||||| |||||||| ||||| ||||||||| ||||| ||||||
Sbjct: 70 ggtagtcatttcccttggccggagatgaggtcgccgcggcgccgccttgctctg 17
>gb|AL503478.1|AL503478 AL503478 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW02E14T 5', mRNA sequence
Length = 700
Score = 327 bits (165), Expect = 4e-088
Identities = 335/391 (85%), Gaps = 3/391 (0%)
Strand = Plus / Minus
Query: 388 actgcctgttcttcttcttgacaccggacttggcaacctggaggctgaggtacaccgagc 447
||||||||||||||||||||||||| ||||||||||||||||||||| |||| || | ||
Sbjct: 615 actgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtaaactgcgc 556
Query: 448 tcagcctagcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctggt 507
|||| || |||||||| |||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 555 tcagtcttgcaagagcaggcttggtcaagtcaggcctgtagtagttgtcactgacctggt 496
Query: 508 ttttcacagccttggccatcttgcggaactccttgcgcatcacagacttgtggctgagct 567
| || ||||||||||||||||||||||||||||||||||| |||| ||||||| |||
Sbjct: 495 tcttgacagccttggccatcttgcggaactccttgcgcatgacagtcttgtgggtgaagg 436
Query: 568 tcgcaggtgcgttctgcttcttggtcttggtagtagagaggaccacagccgagtcctt-- 625
|||||| |||||||||||| | |||||| || ||||||||||||| | |||||
Sbjct: 435 ccgcaggcttgttctgcttctttgacttggttgtggagaggaccacagtcatctccttct 376
Query: 626 -tgcagctggctggatcgtcacagtcttcttgttcgccaaacccgagtgtttgaaggagt 684
||||| ||||| | |||||||||||||||||| |||| || |||| ||| ||||||
Sbjct: 375 cagcagcaggctgcaccgtcacagtcttcttgtttgccaggccagagtacttgtaggagt 316
Query: 685 ggatgttgtagaggttgttcggctccttggtgaactgcaccttggcattgccgttgccga 744
||| |||||||||||||| ||||||||| ||||||| |||||||| |||| ||||||||
Sbjct: 315 ggacattgtagaggttgttgggctccttgctgaactgaaccttggcgttgctgttgccga 256
Query: 745 actgcttcacaaggaaggagttgttcttcct 775
||||||| | |||||| |||||||||||||
Sbjct: 255 actgcttgatcaggaagcagttgttcttcct 225
>gb|AL505202.1|AL505202 AL505202 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW07L10V 5', mRNA sequence
Length = 681
Score = 327 bits (165), Expect = 4e-088
Identities = 335/391 (85%), Gaps = 3/391 (0%)
Strand = Plus / Minus
Query: 388 actgcctgttcttcttcttgacaccggacttggcaacctggaggctgaggtacaccgagc 447
||||||||||||||||||||||||| ||||||||||||||||||||| |||| || | ||
Sbjct: 496 actgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtaaactgcgc 437
Query: 448 tcagcctagcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctggt 507
|||| || |||||||| |||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 436 tcagtcttgcaagagcaggcttggtcaagtcaggcctgtagtagttgtcactgacctggt 377
Query: 508 ttttcacagccttggccatcttgcggaactccttgcgcatcacagacttgtggctgagct 567
| || ||||||||||||||||||||||||||||||||||| |||| ||||||| |||
Sbjct: 376 tcttgacagccttggccatcttgcggaactccttgcgcatgacagtcttgtgggtgaagg 317
Query: 568 tcgcaggtgcgttctgcttcttggtcttggtagtagagaggaccacagccgagtcctt-- 625
|||||| |||||||||||| | |||||| || ||||||||||||| | |||||
Sbjct: 316 ccgcaggcttgttctgcttctttgacttggttgtggagaggaccacagtcatctccttct 257
Query: 626 -tgcagctggctggatcgtcacagtcttcttgttcgccaaacccgagtgtttgaaggagt 684
||||| ||||| | |||||||||||||||||| |||| || |||| ||| ||||||
Sbjct: 256 cagcagcaggctgcaccgtcacagtcttcttgtttgccaggccagagtacttgtaggagt 197
Query: 685 ggatgttgtagaggttgttcggctccttggtgaactgcaccttggcattgccgttgccga 744
||| |||||||||||||| ||||||||| ||||||| |||||||| |||| ||||||||
Sbjct: 196 ggacattgtagaggttgttgggctccttgctgaactgaaccttggcgttgctgttgccga 137
Query: 745 actgcttcacaaggaaggagttgttcttcct 775
||||||| | |||||| |||||||||||||
Sbjct: 136 actgcttgatcaggaagcagttgttcttcct 106
>gb|BF622318.3|BF622318 HVSMEa0002M02f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0002M02f, mRNA sequence
Length = 687
Score = 327 bits (165), Expect = 4e-088
Identities = 335/391 (85%), Gaps = 3/391 (0%)
Strand = Plus / Plus
Query: 388 actgcctgttcttcttcttgacaccggacttggcaacctggaggctgaggtacaccgagc 447
||||||||||||||||||||||||| ||||||||||||||||||||| |||| || | ||
Sbjct: 189 actgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtaaactgcgc 248
Query: 448 tcagcctagcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctggt 507
|||| || |||||||| |||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 249 tcagtcttgcaagagcaggcttggtcaagtcaggcctgtagtagttgtcactgacctggt 308
Query: 508 ttttcacagccttggccatcttgcggaactccttgcgcatcacagacttgtggctgagct 567
| || ||||||||||||||||||||||||||||||||||| |||| ||||||| |||
Sbjct: 309 tcttgacagccttggccatcttgcggaactccttgcgcatgacagtcttgtgggtgaagg 368
Query: 568 tcgcaggtgcgttctgcttcttggtcttggtagtagagaggaccacagccgagtcctt-- 625
|||||| |||||||||||| | |||||| || ||||||||||||| | |||||
Sbjct: 369 ccgcaggcttgttctgcttctttgacttggttgtggagaggaccacagtcatctccttct 428
Query: 626 -tgcagctggctggatcgtcacagtcttcttgttcgccaaacccgagtgtttgaaggagt 684
||||| ||||| | |||||||||||||||||| |||| || |||| ||| ||||||
Sbjct: 429 cagcagcaggctgcaccgtcacagtcttcttgtttgccaggccagagtacttgtaggagt 488
Query: 685 ggatgttgtagaggttgttcggctccttggtgaactgcaccttggcattgccgttgccga 744
||| |||||||||||||| ||||||||| ||||||| |||||||| |||| ||||||||
Sbjct: 489 ggacattgtagaggttgttgggctccttgctgaactgaaccttggcgttgctgttgccga 548
Query: 745 actgcttcacaaggaaggagttgttcttcct 775
||||||| | |||||| |||||||||||||
Sbjct: 549 actgcttgatcaggaagcagttgttcttcct 579
>gb|BF630149.2|BF630149 HVSMEb0008C02f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0008C02f, mRNA sequence
Length = 497
Score = 327 bits (165), Expect = 4e-088
Identities = 335/391 (85%), Gaps = 3/391 (0%)
Strand = Plus / Minus
Query: 388 actgcctgttcttcttcttgacaccggacttggcaacctggaggctgaggtacaccgagc 447
||||||||||||||||||||||||| ||||||||||||||||||||| |||| || | ||
Sbjct: 485 actgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtaaactgcgc 426
Query: 448 tcagcctagcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctggt 507
|||| || |||||||| |||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 425 tcagtcttgcaagagcaggcttggtcaagtcaggcctgtagtagttgtcactgacctggt 366
Query: 508 ttttcacagccttggccatcttgcggaactccttgcgcatcacagacttgtggctgagct 567
| || ||||||||||||||||||||||||||||||||||| |||| ||||||| |||
Sbjct: 365 tcttgacagccttggccatcttgcggaactccttgcgcatgacagtcttgtgggtgaagg 306
Query: 568 tcgcaggtgcgttctgcttcttggtcttggtagtagagaggaccacagccgagtcctt-- 625
|||||| |||||||||||| | |||||| || ||||||||||||| | |||||
Sbjct: 305 ccgcaggcttgttctgcttctttgacttggttgtggagaggaccacagtcatctccttct 246
Query: 626 -tgcagctggctggatcgtcacagtcttcttgttcgccaaacccgagtgtttgaaggagt 684
||||| ||||| | |||||||||||||||||| |||| || |||| ||| ||||||
Sbjct: 245 cagcagcaggctgcaccgtcacagtcttcttgtttgccaggccagagtacttgtaggagt 186
Query: 685 ggatgttgtagaggttgttcggctccttggtgaactgcaccttggcattgccgttgccga 744
||| |||||||||||||| ||||||||| ||||||| |||||||| |||| ||||||||
Sbjct: 185 ggacattgtagaggttgttgggctccttgctgaactgaaccttggcgttgctgttgccga 126
Query: 745 actgcttcacaaggaaggagttgttcttcct 775
||||||| | |||||| |||||||||||||
Sbjct: 125 actgcttgatcaggaagcagttgttcttcct 95
>gb|BG343037.2|BG343037 HVSMEg0001N01f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0001N01f, mRNA sequence
Length = 713
Score = 327 bits (165), Expect = 4e-088
Identities = 335/391 (85%), Gaps = 3/391 (0%)
Strand = Plus / Minus
Query: 388 actgcctgttcttcttcttgacaccggacttggcaacctggaggctgaggtacaccgagc 447
||||||||||||||||||||||||| ||||||||||||||||||||| |||| || | ||
Sbjct: 493 actgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtaaactgcgc 434
Query: 448 tcagcctagcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctggt 507
|||| || |||||||| |||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 433 tcagtcttgcaagagcaggcttggtcaagtcaggcctgtagtagttgtcactgacctggt 374
Query: 508 ttttcacagccttggccatcttgcggaactccttgcgcatcacagacttgtggctgagct 567
| || ||||||||||||||||||||||||||||||||||| |||| ||||||| |||
Sbjct: 373 tcttgacagccttggccatcttgcggaactccttgcgcatgacagtcttgtgggtgaagg 314
Query: 568 tcgcaggtgcgttctgcttcttggtcttggtagtagagaggaccacagccgagtcctt-- 625
|||||| |||||||||||| | |||||| || ||||||||||||| | |||||
Sbjct: 313 ccgcaggcttgttctgcttctttgacttggttgtggagaggaccacagtcatctccttct 254
Query: 626 -tgcagctggctggatcgtcacagtcttcttgttcgccaaacccgagtgtttgaaggagt 684
||||| ||||| | |||||||||||||||||| |||| || |||| ||| ||||||
Sbjct: 253 cagcagcaggctgcaccgtcacagtcttcttgtttgccaggccagagtacttgtaggagt 194
Query: 685 ggatgttgtagaggttgttcggctccttggtgaactgcaccttggcattgccgttgccga 744
||| |||||||||||||| ||||||||| ||||||| |||||||| |||| ||||||||
Sbjct: 193 ggacattgtagaggttgttgggctccttgctgaactgaaccttggcgttgctgttgccga 134
Query: 745 actgcttcacaaggaaggagttgttcttcct 775
||||||| | |||||| |||||||||||||
Sbjct: 133 actgcttgatcaggaagcagttgttcttcct 103
>gb|AV915254.1|AV915254 AV915254 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags13j03 5', mRNA sequence
Length = 523
Score = 327 bits (165), Expect = 4e-088
Identities = 335/391 (85%), Gaps = 3/391 (0%)
Strand = Plus / Minus
Query: 388 actgcctgttcttcttcttgacaccggacttggcaacctggaggctgaggtacaccgagc 447
||||||||||||||||||||||||| ||||||||||||||||||||| |||| || | ||
Sbjct: 490 actgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtaaactgcgc 431
Query: 448 tcagcctagcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctggt 507
|||| || |||||||| |||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 430 tcagtcttgcaagagcaggcttggtcaagtcaggcctgtagtagttgtcactgacctggt 371
Query: 508 ttttcacagccttggccatcttgcggaactccttgcgcatcacagacttgtggctgagct 567
| || ||||||||||||||||||||||||||||||||||| |||| ||||||| |||
Sbjct: 370 tcttgacagccttggccatcttgcggaactccttgcgcatgacagtcttgtgggtgaagg 311
Query: 568 tcgcaggtgcgttctgcttcttggtcttggtagtagagaggaccacagccgagtcctt-- 625
|||||| |||||||||||| | |||||| || ||||||||||||| | |||||
Sbjct: 310 ccgcaggcttgttctgcttctttgacttggttgtggagaggaccacagtcatctccttct 251
Query: 626 -tgcagctggctggatcgtcacagtcttcttgttcgccaaacccgagtgtttgaaggagt 684
||||| ||||| | |||||||||||||||||| |||| || |||| ||| ||||||
Sbjct: 250 cagcagcaggctgcaccgtcacagtcttcttgtttgccaggccagagtacttgtaggagt 191
Query: 685 ggatgttgtagaggttgttcggctccttggtgaactgcaccttggcattgccgttgccga 744
||| |||||||||||||| ||||||||| ||||||| |||||||| |||| ||||||||
Sbjct: 190 ggacattgtagaggttgttgggctccttgctgaactgaaccttggcgttgctgttgccga 131
Query: 745 actgcttcacaaggaaggagttgttcttcct 775
||||||| | |||||| |||||||||||||
Sbjct: 130 actgcttgatcaggaagcagttgttcttcct 100
>gb|AV915379.1|AV915379 AV915379 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags14c18 5', mRNA sequence
Length = 651
Score = 327 bits (165), Expect = 4e-088
Identities = 335/391 (85%), Gaps = 3/391 (0%)
Strand = Plus / Minus
Query: 388 actgcctgttcttcttcttgacaccggacttggcaacctggaggctgaggtacaccgagc 447
||||||||||||||||||||||||| ||||||||||||||||||||| |||| || | ||
Sbjct: 488 actgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtaaactgcgc 429
Query: 448 tcagcctagcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctggt 507
|||| || |||||||| |||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 428 tcagtcttgcaagagcaggcttggtcaagtcaggcctgtagtagttgtcactgacctggt 369
Query: 508 ttttcacagccttggccatcttgcggaactccttgcgcatcacagacttgtggctgagct 567
| || ||||||||||||||||||||||||||||||||||| |||| ||||||| |||
Sbjct: 368 tcttgacagccttggccatcttgcggaactccttgcgcatgacagtcttgtgggtgaagg 309
Query: 568 tcgcaggtgcgttctgcttcttggtcttggtagtagagaggaccacagccgagtcctt-- 625
|||||| |||||||||||| | |||||| || ||||||||||||| | |||||
Sbjct: 308 ccgcaggcttgttctgcttctttgacttggttgtggagaggaccacagtcatctccttct 249
Query: 626 -tgcagctggctggatcgtcacagtcttcttgttcgccaaacccgagtgtttgaaggagt 684
||||| ||||| | |||||||||||||||||| |||| || |||| ||| ||||||
Sbjct: 248 cagcagcaggctgcaccgtcacagtcttcttgtttgccaggccagagtacttgtaggagt 189
Query: 685 ggatgttgtagaggttgttcggctccttggtgaactgcaccttggcattgccgttgccga 744
||| |||||||||||||| ||||||||| ||||||| |||||||| |||| ||||||||
Sbjct: 188 ggacattgtagaggttgttgggctccttgctgaactgaaccttggcgttgctgttgccga 129
Query: 745 actgcttcacaaggaaggagttgttcttcct 775
||||||| | |||||| |||||||||||||
Sbjct: 128 actgcttgatcaggaagcagttgttcttcct 98
>gb|AV917234.1|AV917234 AV917234 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags18b03 5', mRNA sequence
Length = 629
Score = 327 bits (165), Expect = 4e-088
Identities = 335/391 (85%), Gaps = 3/391 (0%)
Strand = Plus / Minus
Query: 388 actgcctgttcttcttcttgacaccggacttggcaacctggaggctgaggtacaccgagc 447
||||||||||||||||||||||||| ||||||||||||||||||||| |||| || | ||
Sbjct: 469 actgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtaaactgcgc 410
Query: 448 tcagcctagcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctggt 507
|||| || |||||||| |||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 409 tcagtcttgcaagagcaggcttggtcaagtcaggcctgtagtagttgtcactgacctggt 350
Query: 508 ttttcacagccttggccatcttgcggaactccttgcgcatcacagacttgtggctgagct 567
| || ||||||||||||||||||||||||||||||||||| |||| ||||||| |||
Sbjct: 349 tcttgacagccttggccatcttgcggaactccttgcgcatgacagtcttgtgggtgaagg 290
Query: 568 tcgcaggtgcgttctgcttcttggtcttggtagtagagaggaccacagccgagtcctt-- 625
|||||| |||||||||||| | |||||| || ||||||||||||| | |||||
Sbjct: 289 ccgcaggcttgttctgcttctttgacttggttgtggagaggaccacagtcatctccttct 230
Query: 626 -tgcagctggctggatcgtcacagtcttcttgttcgccaaacccgagtgtttgaaggagt 684
||||| ||||| | |||||||||||||||||| |||| || |||| ||| ||||||
Sbjct: 229 cagcagcaggctgcaccgtcacagtcttcttgtttgccaggccagagtacttgtaggagt 170
Query: 685 ggatgttgtagaggttgttcggctccttggtgaactgcaccttggcattgccgttgccga 744
||| |||||||||||||| ||||||||| ||||||| |||||||| |||| ||||||||
Sbjct: 169 ggacattgtagaggttgttgggctccttgctgaactgaaccttggcgttgctgttgccga 110
Query: 745 actgcttcacaaggaaggagttgttcttcct 775
||||||| | |||||| |||||||||||||
Sbjct: 109 actgcttgatcaggaagcagttgttcttcct 79
>gb|AV920467.1|AV920467 AV920467 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags14c18 3', mRNA sequence
Length = 676
Score = 327 bits (165), Expect = 4e-088
Identities = 335/391 (85%), Gaps = 3/391 (0%)
Strand = Plus / Plus
Query: 388 actgcctgttcttcttcttgacaccggacttggcaacctggaggctgaggtacaccgagc 447
||||||||||||||||||||||||| ||||||||||||||||||||| |||| || | ||
Sbjct: 189 actgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtaaactgcgc 248
Query: 448 tcagcctagcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctggt 507
|||| || |||||||| |||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 249 tcagtcttgcaagagcaggcttggtcaagtcaggcctgtagtagttgtcactgacctggt 308
Query: 508 ttttcacagccttggccatcttgcggaactccttgcgcatcacagacttgtggctgagct 567
| || ||||||||||||||||||||||||||||||||||| |||| ||||||| |||
Sbjct: 309 tcttgacagccttggccatcttgcggaactccttgcgcatgacagtcttgtgggtgaagg 368
Query: 568 tcgcaggtgcgttctgcttcttggtcttggtagtagagaggaccacagccgagtcctt-- 625
|||||| |||||||||||| | |||||| || ||||||||||||| | |||||
Sbjct: 369 ccgcaggcttgttctgcttctttgacttggttgtggagaggaccacagtcatctccttct 428
Query: 626 -tgcagctggctggatcgtcacagtcttcttgttcgccaaacccgagtgtttgaaggagt 684
||||| ||||| | |||||||||||||||||| |||| || |||| ||| ||||||
Sbjct: 429 cagcagcaggctgcaccgtcacagtcttcttgtttgccaggccagagtacttgtaggagt 488
Query: 685 ggatgttgtagaggttgttcggctccttggtgaactgcaccttggcattgccgttgccga 744
||| |||||||||||||| ||||||||| ||||||| |||||||| |||| ||||||||
Sbjct: 489 ggacattgtagaggttgttgggctccttgctgaactgaaccttggcgttgctgttgccga 548
Query: 745 actgcttcacaaggaaggagttgttcttcct 775
||||||| | |||||| |||||||||||||
Sbjct: 549 actgcttgatcaggaagcagttgttcttcct 579
>gb|AV922400.1|AV922400 AV922400 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags18b03 3', mRNA sequence
Length = 574
Score = 327 bits (165), Expect = 4e-088
Identities = 335/391 (85%), Gaps = 3/391 (0%)
Strand = Plus / Plus
Query: 388 actgcctgttcttcttcttgacaccggacttggcaacctggaggctgaggtacaccgagc 447
||||||||||||||||||||||||| ||||||||||||||||||||| |||| || | ||
Sbjct: 180 actgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtaaactgcgc 239
Query: 448 tcagcctagcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctggt 507
|||| || |||||||| |||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 240 tcagtcttgcaagagcaggcttggtcaagtcaggcctgtagtagttgtcactgacctggt 299
Query: 508 ttttcacagccttggccatcttgcggaactccttgcgcatcacagacttgtggctgagct 567
| || ||||||||||||||||||||||||||||||||||| |||| ||||||| |||
Sbjct: 300 tcttgacagccttggccatcttgcggaactccttgcgcatgacagtcttgtgggtgaagg 359
Query: 568 tcgcaggtgcgttctgcttcttggtcttggtagtagagaggaccacagccgagtcctt-- 625
|||||| |||||||||||| | |||||| || ||||||||||||| | |||||
Sbjct: 360 ccgcaggcttgttctgcttctttgacttggttgtggagaggaccacagtcatctccttct 419
Query: 626 -tgcagctggctggatcgtcacagtcttcttgttcgccaaacccgagtgtttgaaggagt 684
||||| ||||| | |||||||||||||||||| |||| || |||| ||| ||||||
Sbjct: 420 cagcagcaggctgcaccgtcacagtcttcttgtttgccaggccagagtacttgtaggagt 479
Query: 685 ggatgttgtagaggttgttcggctccttggtgaactgcaccttggcattgccgttgccga 744
||| |||||||||||||| ||||||||| ||||||| |||||||| |||| ||||||||
Sbjct: 480 ggacattgtagaggttgttgggctccttgctgaactgaaccttggcgttgctgttgccga 539
Query: 745 actgcttcacaaggaaggagttgttcttcct 775
||||||| | |||||| |||||||||||||
Sbjct: 540 actgcttgatcaggaagcagttgttcttcct 570
>gb|AJ460819.1|AJ460819 AJ460819 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200024A08F1, mRNA sequence
Length = 420
Score = 327 bits (165), Expect = 4e-088
Identities = 335/391 (85%), Gaps = 3/391 (0%)
Strand = Plus / Minus
Query: 388 actgcctgttcttcttcttgacaccggacttggcaacctggaggctgaggtacaccgagc 447
||||||||||||||||||||||||| ||||||||||||||||||||| |||| || | ||
Sbjct: 407 actgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtaaactgcgc 348
Query: 448 tcagcctagcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctggt 507
|||| || |||||||| |||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 347 tcagtcttgcaagagcaggcttggtcaagtcaggcctgtagtagttgtcactgacctggt 288
Query: 508 ttttcacagccttggccatcttgcggaactccttgcgcatcacagacttgtggctgagct 567
| || ||||||||||||||||||||||||||||||||||| |||| ||||||| |||
Sbjct: 287 tcttgacagccttggccatcttgcggaactccttgcgcatgacagtcttgtgggtgaagg 228
Query: 568 tcgcaggtgcgttctgcttcttggtcttggtagtagagaggaccacagccgagtcctt-- 625
|||||| |||||||||||| | |||||| || ||||||||||||| | |||||
Sbjct: 227 ccgcaggcttgttctgcttctttgacttggttgtggagaggaccacagtcatctccttct 168
Query: 626 -tgcagctggctggatcgtcacagtcttcttgttcgccaaacccgagtgtttgaaggagt 684
||||| ||||| | |||||||||||||||||| |||| || |||| ||| ||||||
Sbjct: 167 cagcagcaggctgcaccgtcacagtcttcttgtttgccaggccagagtacttgtaggagt 108
Query: 685 ggatgttgtagaggttgttcggctccttggtgaactgcaccttggcattgccgttgccga 744
||| |||||||||||||| ||||||||| ||||||| |||||||| |||| ||||||||
Sbjct: 107 ggacattgtagaggttgttgggctccttgctgaactgaaccttggcgttgctgttgccga 48
Query: 745 actgcttcacaaggaaggagttgttcttcct 775
||||||| | |||||| |||||||||||||
Sbjct: 47 actgcttgatcaggaagcagttgttcttcct 17
>gb|BJ464294.1|BJ464294 BJ464294 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags33l02 5', mRNA sequence
Length = 666
Score = 327 bits (165), Expect = 4e-088
Identities = 335/391 (85%), Gaps = 3/391 (0%)
Strand = Plus / Minus
Query: 388 actgcctgttcttcttcttgacaccggacttggcaacctggaggctgaggtacaccgagc 447
||||||||||||||||||||||||| ||||||||||||||||||||| |||| || | ||
Sbjct: 494 actgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtaaactgcgc 435
Query: 448 tcagcctagcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctggt 507
|||| || |||||||| |||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 434 tcagtcttgcaagagcaggcttggtcaagtcaggcctgtagtagttgtcactgacctggt 375
Query: 508 ttttcacagccttggccatcttgcggaactccttgcgcatcacagacttgtggctgagct 567
| || ||||||||||||||||||||||||||||||||||| |||| ||||||| |||
Sbjct: 374 tcttgacagccttggccatcttgcggaactccttgcgcatgacagtcttgtgggtgaagg 315
Query: 568 tcgcaggtgcgttctgcttcttggtcttggtagtagagaggaccacagccgagtcctt-- 625
|||||| |||||||||||| | |||||| || ||||||||||||| | |||||
Sbjct: 314 ccgcaggcttgttctgcttctttgacttggttgtggagaggaccacagtcatctccttct 255
Query: 626 -tgcagctggctggatcgtcacagtcttcttgttcgccaaacccgagtgtttgaaggagt 684
||||| ||||| | |||||||||||||||||| |||| || |||| ||| ||||||
Sbjct: 254 cagcagcaggctgcaccgtcacagtcttcttgtttgccaggccagagtacttgtaggagt 195
Query: 685 ggatgttgtagaggttgttcggctccttggtgaactgcaccttggcattgccgttgccga 744
||| |||||||||||||| ||||||||| ||||||| |||||||| |||| ||||||||
Sbjct: 194 ggacattgtagaggttgttgggctccttgctgaactgaaccttggcgttgctgttgccga 135
Query: 745 actgcttcacaaggaaggagttgttcttcct 775
||||||| | |||||| |||||||||||||
Sbjct: 134 actgcttgatcaggaagcagttgttcttcct 104
>gb|BJ465076.1|BJ465076 BJ465076 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags37i10 5', mRNA sequence
Length = 642
Score = 327 bits (165), Expect = 4e-088
Identities = 335/391 (85%), Gaps = 3/391 (0%)
Strand = Plus / Minus
Query: 388 actgcctgttcttcttcttgacaccggacttggcaacctggaggctgaggtacaccgagc 447
||||||||||||||||||||||||| ||||||||||||||||||||| |||| || | ||
Sbjct: 431 actgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtaaactgcgc 372
Query: 448 tcagcctagcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctggt 507
|||| || |||||||| |||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 371 tcagtcttgcaagagcaggcttggtcaagtcaggcctgtagtagttgtcactgacctggt 312
Query: 508 ttttcacagccttggccatcttgcggaactccttgcgcatcacagacttgtggctgagct 567
| || ||||||||||||||||||||||||||||||||||| |||| ||||||| |||
Sbjct: 311 tcttgacagccttggccatcttgcggaactccttgcgcatgacagtcttgtgggtgaagg 252
Query: 568 tcgcaggtgcgttctgcttcttggtcttggtagtagagaggaccacagccgagtcctt-- 625
|||||| |||||||||||| | |||||| || ||||||||||||| | |||||
Sbjct: 251 ccgcaggcttgttctgcttctttgacttggttgtggagaggaccacagtcatctccttct 192
Query: 626 -tgcagctggctggatcgtcacagtcttcttgttcgccaaacccgagtgtttgaaggagt 684
||||| ||||| | |||||||||||||||||| |||| || |||| ||| ||||||
Sbjct: 191 cagcagcaggctgcaccgtcacagtcttcttgtttgccaggccagagtacttgtaggagt 132
Query: 685 ggatgttgtagaggttgttcggctccttggtgaactgcaccttggcattgccgttgccga 744
||| |||||||||||||| ||||||||| ||||||| |||||||| |||| ||||||||
Sbjct: 131 ggacattgtagaggttgttgggctccttgctgaactgaaccttggcgttgctgttgccga 72
Query: 745 actgcttcacaaggaaggagttgttcttcct 775
||||||| | |||||| |||||||||||||
Sbjct: 71 actgcttgatcaggaagcagttgttcttcct 41
>gb|BJ468185.1|BJ468185 BJ468185 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags37i10 3', mRNA sequence
Length = 575
Score = 327 bits (165), Expect = 4e-088
Identities = 335/391 (85%), Gaps = 3/391 (0%)
Strand = Plus / Plus
Query: 388 actgcctgttcttcttcttgacaccggacttggcaacctggaggctgaggtacaccgagc 447
||||||||||||||||||||||||| ||||||||||||||||||||| |||| || | ||
Sbjct: 183 actgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtaaactgcgc 242
Query: 448 tcagcctagcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctggt 507
|||| || |||||||| |||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 243 tcagtcttgcaagagcaggcttggtcaagtcaggcctgtagtagttgtcactgacctggt 302
Query: 508 ttttcacagccttggccatcttgcggaactccttgcgcatcacagacttgtggctgagct 567
| || ||||||||||||||||||||||||||||||||||| |||| ||||||| |||
Sbjct: 303 tcttgacagccttggccatcttgcggaactccttgcgcatgacagtcttgtgggtgaagg 362
Query: 568 tcgcaggtgcgttctgcttcttggtcttggtagtagagaggaccacagccgagtcctt-- 625
|||||| |||||||||||| | |||||| || ||||||||||||| | |||||
Sbjct: 363 ccgcaggcttgttctgcttctttgacttggttgtggagaggaccacagtcatctccttct 422
Query: 626 -tgcagctggctggatcgtcacagtcttcttgttcgccaaacccgagtgtttgaaggagt 684
||||| ||||| | |||||||||||||||||| |||| || |||| ||| ||||||
Sbjct: 423 cagcagcaggctgcaccgtcacagtcttcttgtttgccaggccagagtacttgtaggagt 482
Query: 685 ggatgttgtagaggttgttcggctccttggtgaactgcaccttggcattgccgttgccga 744
||| |||||||||||||| ||||||||| ||||||| |||||||| |||| ||||||||
Sbjct: 483 ggacattgtagaggttgttgggctccttgctgaactgaaccttggcgttgctgttgccga 542
Query: 745 actgcttcacaaggaaggagttgttcttcct 775
||||||| | |||||| |||||||||||||
Sbjct: 543 actgcttgatcaggaagcagttgttcttcct 573
>gb|BQ459854.1|BQ459854 HA07O12r HA Hordeum vulgare subsp. vulgare cDNA clone HA07O12
5-PRIME, mRNA sequence
Length = 637
Score = 327 bits (165), Expect = 4e-088
Identities = 335/391 (85%), Gaps = 3/391 (0%)
Strand = Plus / Minus
Query: 388 actgcctgttcttcttcttgacaccggacttggcaacctggaggctgaggtacaccgagc 447
||||||||||||||||||||||||| ||||||||||||||||||||| |||| || | ||
Sbjct: 491 actgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtaaactgcgc 432
Query: 448 tcagcctagcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctggt 507
|||| || |||||||| |||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 431 tcagtcttgcaagagcaggcttggtcaagtcaggcctgtagtagttgtcactgacctggt 372
Query: 508 ttttcacagccttggccatcttgcggaactccttgcgcatcacagacttgtggctgagct 567
| || ||||||||||||||||||||||||||||||||||| |||| ||||||| |||
Sbjct: 371 tcttgacagccttggccatcttgcggaactccttgcgcatgacagtcttgtgggtgaagg 312
Query: 568 tcgcaggtgcgttctgcttcttggtcttggtagtagagaggaccacagccgagtcctt-- 625
|||||| |||||||||||| | |||||| || ||||||||||||| | |||||
Sbjct: 311 ccgcaggcttgttctgcttctttgacttggttgtggagaggaccacagtcatctccttct 252
Query: 626 -tgcagctggctggatcgtcacagtcttcttgttcgccaaacccgagtgtttgaaggagt 684
||||| ||||| | |||||||||||||||||| |||| || |||| ||| ||||||
Sbjct: 251 cagcagcaggctgcaccgtcacagtcttcttgtttgccaggccagagtacttgtaggagt 192
Query: 685 ggatgttgtagaggttgttcggctccttggtgaactgcaccttggcattgccgttgccga 744
||| |||||||||||||| ||||||||| ||||||| |||||||| |||| ||||||||
Sbjct: 191 ggacattgtagaggttgttgggctccttgctgaactgaaccttggcgttgctgttgccga 132
Query: 745 actgcttcacaaggaaggagttgttcttcct 775
||||||| | |||||| |||||||||||||
Sbjct: 131 actgcttgatcaggaagcagttgttcttcct 101
>gb|BQ460437.1|BQ460437 HA09K01r HA Hordeum vulgare subsp. vulgare cDNA clone HA09K01
5-PRIME, mRNA sequence
Length = 524
Score = 327 bits (165), Expect = 4e-088
Identities = 335/391 (85%), Gaps = 3/391 (0%)
Strand = Plus / Minus
Query: 388 actgcctgttcttcttcttgacaccggacttggcaacctggaggctgaggtacaccgagc 447
||||||||||||||||||||||||| ||||||||||||||||||||| |||| || | ||
Sbjct: 496 actgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtaaactgcgc 437
Query: 448 tcagcctagcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctggt 507
|||| || |||||||| |||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 436 tcagtcttgcaagagcaggcttggtcaagtcaggcctgtagtagttgtcactgacctggt 377
Query: 508 ttttcacagccttggccatcttgcggaactccttgcgcatcacagacttgtggctgagct 567
| || ||||||||||||||||||||||||||||||||||| |||| ||||||| |||
Sbjct: 376 tcttgacagccttggccatcttgcggaactccttgcgcatgacagtcttgtgggtgaagg 317
Query: 568 tcgcaggtgcgttctgcttcttggtcttggtagtagagaggaccacagccgagtcctt-- 625
|||||| |||||||||||| | |||||| || ||||||||||||| | |||||
Sbjct: 316 ccgcaggcttgttctgcttctttgacttggttgtggagaggaccacagtcatctccttct 257
Query: 626 -tgcagctggctggatcgtcacagtcttcttgttcgccaaacccgagtgtttgaaggagt 684
||||| ||||| | |||||||||||||||||| |||| || |||| ||| ||||||
Sbjct: 256 cagcagcaggctgcaccgtcacagtcttcttgtttgccaggccagagtacttgtaggagt 197
Query: 685 ggatgttgtagaggttgttcggctccttggtgaactgcaccttggcattgccgttgccga 744
||| |||||||||||||| ||||||||| ||||||| |||||||| |||| ||||||||
Sbjct: 196 ggacattgtagaggttgttgggctccttgctgaactgaaccttggcgttgctgttgccga 137
Query: 745 actgcttcacaaggaaggagttgttcttcct 775
||||||| | |||||| |||||||||||||
Sbjct: 136 actgcttgatcaggaagcagttgttcttcct 106
>gb|BQ462955.1|BQ462955 HI02I20r HI Hordeum vulgare subsp. vulgare cDNA clone HI02I20
5-PRIME, mRNA sequence
Length = 645
Score = 327 bits (165), Expect = 4e-088
Identities = 335/391 (85%), Gaps = 3/391 (0%)
Strand = Plus / Minus
Query: 388 actgcctgttcttcttcttgacaccggacttggcaacctggaggctgaggtacaccgagc 447
||||||||||||||||||||||||| ||||||||||||||||||||| |||| || | ||
Sbjct: 499 actgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtaaactgcgc 440
Query: 448 tcagcctagcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctggt 507
|||| || |||||||| |||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 439 tcagtcttgcaagagcaggcttggtcaagtcaggcctgtagtagttgtcactgacctggt 380
Query: 508 ttttcacagccttggccatcttgcggaactccttgcgcatcacagacttgtggctgagct 567
| || ||||||||||||||||||||||||||||||||||| |||| ||||||| |||
Sbjct: 379 tcttgacagccttggccatcttgcggaactccttgcgcatgacagtcttgtgggtgaagg 320
Query: 568 tcgcaggtgcgttctgcttcttggtcttggtagtagagaggaccacagccgagtcctt-- 625
|||||| |||||||||||| | |||||| || ||||||||||||| | |||||
Sbjct: 319 ccgcaggcttgttctgcttctttgacttggttgtggagaggaccacagtcatctccttct 260
Query: 626 -tgcagctggctggatcgtcacagtcttcttgttcgccaaacccgagtgtttgaaggagt 684
||||| ||||| | |||||||||||||||||| |||| || |||| ||| ||||||
Sbjct: 259 cagcagcaggctgcaccgtcacagtcttcttgtttgccaggccagagtacttgtaggagt 200
Query: 685 ggatgttgtagaggttgttcggctccttggtgaactgcaccttggcattgccgttgccga 744
||| |||||||||||||| ||||||||| ||||||| |||||||| |||| ||||||||
Sbjct: 199 ggacattgtagaggttgttgggctccttgctgaactgaaccttggcgttgctgttgccga 140
Query: 745 actgcttcacaaggaaggagttgttcttcct 775
||||||| | |||||| |||||||||||||
Sbjct: 139 actgcttgatcaggaagcagttgttcttcct 109
>gb|BQ464640.1|BQ464640 HF02N13r HF Hordeum vulgare subsp. vulgare cDNA clone HF02N13
5-PRIME, mRNA sequence
Length = 450
Score = 327 bits (165), Expect = 4e-088
Identities = 335/391 (85%), Gaps = 3/391 (0%)
Strand = Plus / Minus
Query: 388 actgcctgttcttcttcttgacaccggacttggcaacctggaggctgaggtacaccgagc 447
||||||||||||||||||||||||| ||||||||||||||||||||| |||| || | ||
Sbjct: 442 actgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtaaactgcgc 383
Query: 448 tcagcctagcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctggt 507
|||| || |||||||| |||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 382 tcagtcttgcaagagcaggcttggtcaagtcaggcctgtagtagttgtcactgacctggt 323
Query: 508 ttttcacagccttggccatcttgcggaactccttgcgcatcacagacttgtggctgagct 567
| || ||||||||||||||||||||||||||||||||||| |||| ||||||| |||
Sbjct: 322 tcttgacagccttggccatcttgcggaactccttgcgcatgacagtcttgtgggtgaagg 263
Query: 568 tcgcaggtgcgttctgcttcttggtcttggtagtagagaggaccacagccgagtcctt-- 625
|||||| |||||||||||| | |||||| || ||||||||||||| | |||||
Sbjct: 262 ccgcaggcttgttctgcttctttgacttggttgtggagaggaccacagtcatctccttct 203
Query: 626 -tgcagctggctggatcgtcacagtcttcttgttcgccaaacccgagtgtttgaaggagt 684
||||| ||||| | |||||||||||||||||| |||| || |||| ||| ||||||
Sbjct: 202 cagcagcaggctgcaccgtcacagtcttcttgtttgccaggccagagtacttgtaggagt 143
Query: 685 ggatgttgtagaggttgttcggctccttggtgaactgcaccttggcattgccgttgccga 744
||| |||||||||||||| ||||||||| ||||||| |||||||| |||| ||||||||
Sbjct: 142 ggacattgtagaggttgttgggctccttgctgaactgaaccttggcgttgctgttgccga 83
Query: 745 actgcttcacaaggaaggagttgttcttcct 775
||||||| | |||||| |||||||||||||
Sbjct: 82 actgcttgatcaggaagcagttgttcttcct 52
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 99,878
Number of Sequences: 312970
Number of extensions: 99878
Number of successful extensions: 29457
Number of sequences better than 0.5: 250
Number of HSP's better than 0.5 without gapping: 250
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 28818
Number of HSP's gapped (non-prelim): 517
length of query: 919
length of database: 175,134,539
effective HSP length: 19
effective length of query: 900
effective length of database: 169,188,109
effective search space: 152269298100
effective search space used: 152269298100
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)