BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.662
(940 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BQ767871.1|BQ767871 EBro08_SQ010_G01_R root, 3 week, dro... 458 e-127
gb|BQ768100.1|BQ768100 EBro08_SQ010_N18_R root, 3 week, dro... 458 e-127
gb|AL504092.1|AL504092 AL504092 Hordeum vulgare Barke roots... 450 e-125
gb|AL508606.1|AL508606 AL508606 Hordeum vulgare Barke devel... 450 e-125
gb|BF621740.1|BF621740 HVSMEa0012D19f Hordeum vulgare seedl... 450 e-125
gb|AV915973.1|AV915973 AV915973 K. Sato unpublished cDNA li... 450 e-125
gb|BM099350.2|BM099350 EBes01_SQ002_P20_R embryo sac, 4-6 D... 450 e-125
gb|BU983664.1|BU983664 HA30I04r HA Hordeum vulgare subsp. v... 450 e-125
gb|BU985154.1|BU985154 HF06E18r HF Hordeum vulgare subsp. v... 450 e-125
gb|BU987909.1|BU987909 HF16B19r HF Hordeum vulgare subsp. v... 450 e-125
gb|BU988068.1|BU988068 HF16J05r HF Hordeum vulgare subsp. v... 450 e-125
gb|CA021007.1|CA021007 HZ38L24r HZ Hordeum vulgare subsp. v... 450 e-125
gb|CA021430.1|CA021430 HZ40B09r HZ Hordeum vulgare subsp. v... 450 e-125
gb|CA030594.1|CA030594 HX07I09r HX Hordeum vulgare subsp. v... 450 e-125
gb|CA031011.1|CA031011 HX08M06r HX Hordeum vulgare subsp. v... 450 e-125
gb|CA031516.1|CA031516 HX10D15r HX Hordeum vulgare subsp. v... 450 e-125
gb|CA031697.1|CA031697 HX10N24r HX Hordeum vulgare subsp. v... 450 e-125
gb|CA032437.1|CA032437 HX13A17r HX Hordeum vulgare subsp. v... 450 e-125
emb|X62725.1|HVRNPL172 H.vulgare mRNA for ribosomal protein... 450 e-125
gb|BF627340.3|BF627340 HVSMEb0004J16f Hordeum vulgare seedl... 444 e-123
gb|BQ763528.1|BQ763528 EBro02_SQ008_O14_R root, 3 week, hyd... 436 e-121
gb|BE196427.2|BE196427 HVSMEh0092E08f Hordeum vulgare 5-45 ... 434 e-120
gb|CA024004.1|CA024004 HZ48B13r HZ Hordeum vulgare subsp. v... 434 e-120
gb|CV056944.1|CV056944 BNEL22d1 Barley EST endosperm librar... 434 e-120
gb|CV063871.1|CV063871 BNEL94b11 Barley EST endosperm libra... 434 e-120
gb|AW982608.1|AW982608 HVSMEg0003L18f Hordeum vulgare pre-a... 426 e-118
gb|BQ767736.1|BQ767736 EBro08_SQ009_O18_R root, 3 week, dro... 426 e-118
gb|CV059505.1|CV059505 BNEL48h11 Barley EST endosperm libra... 426 e-118
gb|BQ763037.1|BQ763037 EBro02_SQ006_P22 _R root, 3 week, hy... 422 e-117
gb|CV060707.1|CV060707 BNEL60c2 Barley EST endosperm librar... 420 e-116
gb|CB875588.1|CB875588 HX08M06w HX Hordeum vulgare subsp. v... 418 e-115
gb|BQ459187.1|BQ459187 HA02A19r HA Hordeum vulgare subsp. v... 389 e-106
gb|BM374418.2|BM374418 EBpi03_SQ003_J04_R pistil, 4 DPA, no... 389 e-106
gb|BU982299.1|BU982299 HA26B17r HA Hordeum vulgare subsp. v... 389 e-106
gb|BF624958.1|BF624958 HVSMEa0005E18f Hordeum vulgare seedl... 387 e-106
gb|AJ460715.1|AJ460715 AJ460715 S00002 Hordeum vulgare subs... 387 e-106
gb|BF630001.3|BF630001 HVSMEb0007J18f Hordeum vulgare seedl... 355 2e-096
gb|AV921091.1|AV921091 AV921091 K. Sato unpublished cDNA li... 349 1e-094
gb|BU966967.1|BU966967 HB02O16r BC Hordeum vulgare subsp. v... 345 2e-093
gb|CB876048.1|CB876048 HX10C01w HX Hordeum vulgare subsp. v... 313 6e-084
gb|CB876266.1|CB876266 HX10M10w HX Hordeum vulgare subsp. v... 313 6e-084
gb|CB875182.1|CB875182 HX07I09w HX Hordeum vulgare subsp. v... 311 2e-083
gb|BF617213.2|BF617213 HVSMEc0015A09f Hordeum vulgare seedl... 305 1e-081
gb|CA020562.1|CA020562 HZ36K21r HZ Hordeum vulgare subsp. v... 291 2e-077
gb|BM441853.2|BM441853 EBed07_SQ001_L20_R endosperm, 28 DPA... 287 3e-076
gb|BQ762726.1|BQ762726 EBro02_SQ004_K19 _R root, 3 week, hy... 287 3e-076
gb|BQ756111.1|BQ756111 EBem05_SQ001_M06_R embryo, 14 DPA, n... 260 7e-068
gb|BU996607.1|BU996607 HM14C15r HM Hordeum vulgare subsp. v... 256 1e-066
gb|BU982387.1|BU982387 HA26G08r HA Hordeum vulgare subsp. v... 240 7e-062
gb|BM376645.1|BM376645 EBem05_SQ002_N01_R embryo, 14 DPA, n... 226 1e-057
gb|CV059626.1|CV059626 BNEL4B8 Barley EST endosperm library... 184 4e-045
gb|BU983165.1|BU983165 HA28M03r HA Hordeum vulgare subsp. v... 170 5e-041
gb|CK125795.1|CK125795 BES1824110n06 BES1824 Hordeum vulgar... 168 2e-040
gb|BE421102.1|BE421102 HWM005.G11 ITEC HWM Barley Leaf Libr... 161 5e-038
gb|BG344251.2|BG344251 HVSMEg0008G02f Hordeum vulgare pre-a... 161 5e-038
gb|BQ763861.1|BQ763861 EBro03_SQ005_I16_R root, 3 week, wat... 161 5e-038
gb|AL502866.1|AL502866 AL502866 Hordeum vulgare Barke roots... 155 3e-036
gb|BE421541.1|BE421541 HWM010.D06 ITEC HWM Barley Leaf Libr... 153 1e-035
gb|AL506365.1|AL506365 AL506365 Hordeum vulgare Barke devel... 153 1e-035
gb|AL507835.1|AL507835 AL507835 Hordeum vulgare Barke devel... 153 1e-035
gb|AL509789.1|AL509789 AL509789 Hordeum vulgare Barke devel... 153 1e-035
gb|AL511097.1|AL511097 AL511097 Hordeum vulgare Barke devel... 153 1e-035
gb|BF624574.1|BF624574 HVSMEa0017C16f Hordeum vulgare seedl... 153 1e-035
gb|BF622983.2|BF622983 HVSMEa0012G20f Hordeum vulgare seedl... 153 1e-035
gb|BF258254.2|BF258254 HVSMEf0015D20f Hordeum vulgare seedl... 153 1e-035
gb|BI949588.1|BI949588 HVSMEl0014M15f Hordeum vulgare spike... 153 1e-035
gb|BE559227.2|BE559227 HV_CEb0023B16f Hordeum vulgare seedl... 153 1e-035
gb|BG344444.2|BG344444 HVSMEg0009E16f Hordeum vulgare pre-a... 153 1e-035
gb|BE060239.3|BE060239 HVSMEg0011K20f Hordeum vulgare pre-a... 153 1e-035
gb|BE196005.3|BE196005 HVSMEh0091B16f Hordeum vulgare 5-45 ... 153 1e-035
gb|BM374354.1|BM374354 EBpi03_SQ003_G08_R pistil, 4 DPA, no... 153 1e-035
gb|AV913608.1|AV913608 AV913608 K. Sato unpublished cDNA li... 153 1e-035
gb|AV913609.1|AV913609 AV913609 K. Sato unpublished cDNA li... 153 1e-035
gb|AV915424.1|AV915424 AV915424 K. Sato unpublished cDNA li... 153 1e-035
gb|AV918208.1|AV918208 AV918208 K. Sato unpublished cDNA li... 153 1e-035
gb|AV918825.1|AV918825 AV918825 K. Sato unpublished cDNA li... 153 1e-035
gb|AV918843.1|AV918843 AV918843 K. Sato unpublished cDNA li... 153 1e-035
gb|AV918912.1|AV918912 AV918912 K. Sato unpublished cDNA li... 153 1e-035
gb|AV918913.1|AV918913 AV918913 K. Sato unpublished cDNA li... 153 1e-035
gb|AV919118.1|AV919118 AV919118 K. Sato unpublished cDNA li... 153 1e-035
gb|AV920512.1|AV920512 AV920512 K. Sato unpublished cDNA li... 153 1e-035
gb|AV920576.1|AV920576 AV920576 K. Sato unpublished cDNA li... 153 1e-035
gb|AV924916.1|AV924916 AV924916 K. Sato unpublished cDNA li... 153 1e-035
gb|AV926108.1|AV926108 AV926108 K. Sato unpublished cDNA li... 153 1e-035
gb|AV928306.1|AV928306 AV928306 K. Sato unpublished cDNA li... 153 1e-035
gb|AV930010.1|AV930010 AV930010 K. Sato unpublished cDNA li... 153 1e-035
gb|AV930992.1|AV930992 AV930992 K. Sato unpublished cDNA li... 153 1e-035
gb|AV932478.1|AV932478 AV932478 K. Sato unpublished cDNA li... 153 1e-035
gb|AV935356.1|AV935356 AV935356 K. Sato unpublished cDNA li... 153 1e-035
gb|AJ433113.1|AJ433113 AJ433113 S00002 Hordeum vulgare subs... 153 1e-035
gb|AJ435850.1|AJ435850 AJ435850 S00002 Hordeum vulgare subs... 153 1e-035
gb|AJ460839.1|AJ460839 AJ460839 S00002 Hordeum vulgare subs... 153 1e-035
gb|AJ460840.1|AJ460840 AJ460840 S00002 Hordeum vulgare subs... 153 1e-035
gb|AJ460841.1|AJ460841 AJ460841 S00002 Hordeum vulgare subs... 153 1e-035
gb|AJ460843.1|AJ460843 AJ460843 S00002 Hordeum vulgare subs... 153 1e-035
gb|AJ460844.1|AJ460844 AJ460844 S00002 Hordeum vulgare subs... 153 1e-035
gb|AJ460845.1|AJ460845 AJ460845 S00002 Hordeum vulgare subs... 153 1e-035
gb|AJ460847.1|AJ460847 AJ460847 S00002 Hordeum vulgare subs... 153 1e-035
gb|AJ462383.1|AJ462383 AJ462383 S00002 Hordeum vulgare subs... 153 1e-035
gb|BJ446954.1|BJ446954 BJ446954 K. Sato unpublished cDNA li... 153 1e-035
gb|BJ454954.1|BJ454954 BJ454954 K. Sato unpublished cDNA li... 153 1e-035
gb|BJ462602.1|BJ462602 BJ462602 K. Sato unpublished cDNA li... 153 1e-035
gb|BJ462745.1|BJ462745 BJ462745 K. Sato unpublished cDNA li... 153 1e-035
gb|BJ463936.1|BJ463936 BJ463936 K. Sato unpublished cDNA li... 153 1e-035
gb|BJ465574.1|BJ465574 BJ465574 K. Sato unpublished cDNA li... 153 1e-035
gb|BJ466124.1|BJ466124 BJ466124 K. Sato unpublished cDNA li... 153 1e-035
gb|BJ466202.1|BJ466202 BJ466202 K. Sato unpublished cDNA li... 153 1e-035
gb|BJ466258.1|BJ466258 BJ466258 K. Sato unpublished cDNA li... 153 1e-035
gb|BJ467371.1|BJ467371 BJ467371 K. Sato unpublished cDNA li... 153 1e-035
gb|BJ467684.1|BJ467684 BJ467684 K. Sato unpublished cDNA li... 153 1e-035
gb|BJ468422.1|BJ468422 BJ468422 K. Sato unpublished cDNA li... 153 1e-035
gb|BJ475217.1|BJ475217 BJ475217 K. Sato unpublished cDNA li... 153 1e-035
gb|BQ459064.1|BQ459064 HA02G18r HA Hordeum vulgare subsp. v... 153 1e-035
gb|BQ462761.1|BQ462761 HI01O18T HI Hordeum vulgare subsp. v... 153 1e-035
gb|BQ466111.1|BQ466111 HT01J19T HT Hordeum vulgare subsp. v... 153 1e-035
gb|BQ468785.1|BQ468785 HM02F10r HM Hordeum vulgare subsp. v... 153 1e-035
gb|BQ469261.1|BQ469261 HM03O04r HM Hordeum vulgare subsp. v... 153 1e-035
gb|BQ469350.1|BQ469350 HM04E09r HM Hordeum vulgare subsp. v... 153 1e-035
gb|BQ469406.1|BQ469406 HM04I11r HM Hordeum vulgare subsp. v... 153 1e-035
gb|BQ469648.1|BQ469648 HZ01H06r HZ Hordeum vulgare subsp. v... 153 1e-035
gb|BQ469994.1|BQ469994 HX01H10T HX Hordeum vulgare subsp. v... 153 1e-035
gb|BQ470658.1|BQ470658 HX03K05r HX Hordeum vulgare subsp. v... 153 1e-035
gb|BQ471472.1|BQ471472 HV02I11r HV Hordeum vulgare subsp. v... 153 1e-035
gb|BQ471594.1|BQ471594 HV02O09r HV Hordeum vulgare subsp. v... 153 1e-035
gb|BQ471930.1|BQ471930 HV03O12r HV Hordeum vulgare subsp. v... 153 1e-035
gb|BQ661186.1|BQ661186 HM02F10u HM Hordeum vulgare subsp. v... 153 1e-035
gb|BQ661534.1|BQ661534 HM03O04u HM Hordeum vulgare subsp. v... 153 1e-035
gb|BQ661606.1|BQ661606 HM04E09u HM Hordeum vulgare subsp. v... 153 1e-035
gb|BQ661646.1|BQ661646 HM04I11u HM Hordeum vulgare subsp. v... 153 1e-035
gb|BQ663191.1|BQ663191 HU01C19w HU Hordeum vulgare subsp. v... 153 1e-035
gb|BQ664331.1|BQ664331 HV02O09u HV Hordeum vulgare subsp. v... 153 1e-035
gb|BQ664569.1|BQ664569 HV03O12u HV Hordeum vulgare subsp. v... 153 1e-035
gb|BQ664936.1|BQ664936 HX01H10w HX Hordeum vulgare subsp. v... 153 1e-035
gb|BQ665091.1|BQ665091 HX02B11u HX Hordeum vulgare subsp. v... 153 1e-035
gb|BQ665444.1|BQ665444 HX03K05u HX Hordeum vulgare subsp. v... 153 1e-035
gb|BM368195.2|BM368195 EBed01_SQ002_H01_R endosperm, 6 DPA,... 153 1e-035
gb|BM377953.2|BM377953 EBem04_SQ004_L05_R embryo, 12 DPA, n... 153 1e-035
gb|BM375342.2|BM375342 EBem06_SQ003_B01_R embryo, 21 DPA, n... 153 1e-035
gb|BM099428.2|BM099428 EBes01_SQ003_D15_R embryo sac, 4-6 D... 153 1e-035
gb|BI780860.2|BI780860 EBma05_SQ001_D23_R maternal, 12 DPA,... 153 1e-035
gb|BM101352.2|BM101352 EBpi01_SQ003_J18_R pistil, 1 DPA, no... 153 1e-035
gb|BM099030.2|BM099030 EBpi05_SQ002_L24_R pistil, 8 DPA, no... 153 1e-035
gb|BM372480.2|BM372480 EBpi05_SQ003_B10_R pistil, 8 DPA, no... 153 1e-035
gb|BI776578.2|BI776578 EBpi07_SQ001_A18_R pistil, 12 DPA, n... 153 1e-035
gb|BI778495.2|BI778495 EBro07_SQ003_H10_R root, 3 week, red... 153 1e-035
gb|BM370041.2|BM370041 EBro08_SQ002_M14_R root, 3 week, dro... 153 1e-035
gb|BQ757814.1|BQ757814 EBem10_SQ005_F02_R embryo, 2 Day ger... 153 1e-035
gb|BQ762203.1|BQ762203 EBro01_SQ005_I05 _R root, 3 week, hy... 153 1e-035
gb|BQ762801.1|BQ762801 EBro02_SQ006_K03_R root, 3 week, hyd... 153 1e-035
gb|BQ764528.1|BQ764528 EBca01_SQ004_K05_R carpel, pre-anthe... 153 1e-035
gb|BQ765062.1|BQ765062 EBca01_SQ005_N17_R carpel, pre-anthe... 153 1e-035
gb|BQ766058.1|BQ766058 EBro03_SQ008_M24_R root, 3 week, wat... 153 1e-035
gb|BQ766217.1|BQ766217 EBro08_SQ005_I12_R root, 3 week, dro... 153 1e-035
gb|BQ767122.1|BQ767122 EBro08_SQ008_D05_R root, 3 week, dro... 153 1e-035
gb|BQ767821.1|BQ767821 EBro08_SQ009_N22_R root, 3 week, dro... 153 1e-035
gb|BU968727.1|BU968727 HB08G11r BC Hordeum vulgare subsp. v... 153 1e-035
gb|BU969561.1|BU969561 HB11N23r BC Hordeum vulgare subsp. v... 153 1e-035
gb|BU971851.1|BU971851 HB19N19r BC Hordeum vulgare subsp. v... 153 1e-035
gb|BU976107.1|BU976107 HA03C11u HA Hordeum vulgare subsp. v... 153 1e-035
gb|BU976136.1|BU976136 HA03D07r HA Hordeum vulgare subsp. v... 153 1e-035
gb|BU977909.1|BU977909 HA12E04r HA Hordeum vulgare subsp. v... 153 1e-035
gb|BU977910.1|BU977910 HA12E04u HA Hordeum vulgare subsp. v... 153 1e-035
gb|BU981906.1|BU981906 HA24P13r HA Hordeum vulgare subsp. v... 153 1e-035
gb|BU984081.1|BU984081 HA31O23r HA Hordeum vulgare subsp. v... 153 1e-035
gb|BU984090.1|BU984090 HA31P09r HA Hordeum vulgare subsp. v... 153 1e-035
gb|BU984173.1|BU984173 HF03D07r HF Hordeum vulgare subsp. v... 153 1e-035
gb|BU986056.1|BU986056 HF09H17r HF Hordeum vulgare subsp. v... 153 1e-035
gb|BU988210.1|BU988210 HF16P19r HF Hordeum vulgare subsp. v... 153 1e-035
gb|BU988254.1|BU988254 HF17B23r HF Hordeum vulgare subsp. v... 153 1e-035
gb|BU988624.1|BU988624 HF18D06r HF Hordeum vulgare subsp. v... 153 1e-035
gb|BU995898.1|BU995898 HM11L12r HM Hordeum vulgare subsp. v... 153 1e-035
gb|BU998395.1|BU998395 HI10O19r HI Hordeum vulgare subsp. v... 153 1e-035
gb|BU999043.1|BU999043 HI12P23r HI Hordeum vulgare subsp. v... 153 1e-035
gb|BU999415.1|BU999415 HI14H02r HI Hordeum vulgare subsp. v... 153 1e-035
gb|BU999784.1|BU999784 HI15M03r HI Hordeum vulgare subsp. v... 153 1e-035
gb|CA005759.1|CA005759 HU08L05u HU Hordeum vulgare subsp. v... 153 1e-035
gb|CA007681.1|CA007681 HU08L05r HU Hordeum vulgare subsp. v... 153 1e-035
gb|CA016317.1|CA016317 HV09F07u HV Hordeum vulgare subsp. v... 153 1e-035
gb|CA018676.1|CA018676 HV09F07r HV Hordeum vulgare subsp. v... 153 1e-035
gb|CA020661.1|CA020661 HZ37A16r HZ Hordeum vulgare subsp. v... 153 1e-035
gb|CA021680.1|CA021680 HZ40M14r HZ Hordeum vulgare subsp. v... 153 1e-035
gb|CA021717.1|CA021717 HZ40O10r HZ Hordeum vulgare subsp. v... 153 1e-035
gb|CA022054.1|CA022054 HZ42A14r HZ Hordeum vulgare subsp. v... 153 1e-035
gb|CA022277.1|CA022277 HZ42K14r HZ Hordeum vulgare subsp. v... 153 1e-035
gb|CA023343.1|CA023343 HZ45O23r HZ Hordeum vulgare subsp. v... 153 1e-035
gb|CA023992.1|CA023992 HZ48A23r HZ Hordeum vulgare subsp. v... 153 1e-035
gb|CA025490.1|CA025490 HZ52F02r HZ Hordeum vulgare subsp. v... 153 1e-035
gb|CA025786.1|CA025786 HZ53C07r HZ Hordeum vulgare subsp. v... 153 1e-035
gb|CA028482.1|CA028482 HZ62C04r HZ Hordeum vulgare subsp. v... 153 1e-035
gb|CA029562.1|CA029562 HZ65J05r HZ Hordeum vulgare subsp. v... 153 1e-035
gb|CA029601.1|CA029601 HZ65K23r HZ Hordeum vulgare subsp. v... 153 1e-035
gb|CA029860.1|CA029860 HX05G17r HX Hordeum vulgare subsp. v... 153 1e-035
gb|CA030258.1|CA030258 HX06I16r HX Hordeum vulgare subsp. v... 153 1e-035
gb|CA032690.1|CA032690 HX13O18r HX Hordeum vulgare subsp. v... 153 1e-035
gb|CB859585.1|CB859585 HI10O19w HI Hordeum vulgare subsp. v... 153 1e-035
gb|CB860201.1|CB860201 HI12P23w HI Hordeum vulgare subsp. v... 153 1e-035
gb|CB874488.1|CB874488 HX05G17w HX Hordeum vulgare subsp. v... 153 1e-035
gb|CB874704.1|CB874704 HX06B05w HX Hordeum vulgare subsp. v... 153 1e-035
gb|CB874862.1|CB874862 HX06I16w HX Hordeum vulgare subsp. v... 153 1e-035
gb|CB875347.1|CB875347 HX08A10w HX Hordeum vulgare subsp. v... 153 1e-035
gb|CB882050.1|CB882050 HM11L12w HM Hordeum vulgare subsp. v... 153 1e-035
gb|CV063241.1|CV063241 BNEL88b6 Barley EST endosperm librar... 153 1e-035
gb|CK124631.1|CK124631 BES1824109n05 BES1824 Hordeum vulgar... 153 1e-035
emb|X62724.1|HVRNPL171 H.vulgare mRNA for ribosomal protein... 153 1e-035
gb|AL501432.1|AL501432 AL501432 Hordeum vulgare Barke roots... 147 8e-034
gb|AV927185.1|AV927185 AV927185 K. Sato unpublished cDNA li... 147 8e-034
gb|BM369982.2|BM369982 EBro08_SQ002_J01_R root, 3 week, dro... 147 8e-034
gb|BE421170.1|BE421170 HWM006.E07 ITEC HWM Barley Leaf Libr... 145 3e-033
gb|BM369186.2|BM369186 EBem07_SQ002_N08_R embryo, 28 DPA, n... 145 3e-033
gb|BI778029.2|BI778029 EBro07_SQ001_P11_R root, 3 week, red... 145 3e-033
gb|BI776229.2|BI776229 EBem04_SQ001_B05_R embryo, 12 DPA, n... 141 5e-032
gb|BQ767850.1|BQ767850 EBro08_SQ010_C04_R root, 3 week, dro... 139 2e-031
gb|BM099968.2|BM099968 EBes01_SQ004_M16_R embryo sac, 4-6 D... 135 3e-030
gb|BM377430.2|BM377430 EBem04_SQ003_B21_R embryo, 12 DPA, n... 133 1e-029
gb|AV922674.1|AV922674 AV922674 K. Sato unpublished cDNA li... 131 5e-029
gb|BJ463317.1|BJ463317 BJ463317 K. Sato unpublished cDNA li... 127 7e-028
gb|BQ759754.1|BQ759754 EBpi05_SQ004_E11_R pistil, 8 DPA, no... 125 3e-027
gb|BE216055.2|BE216055 HV_CEb0009E09f Hordeum vulgare seedl... 121 4e-026
gb|BM368634.2|BM368634 EBem08_SQ004_C20_R embryo, 40 DPA, n... 119 2e-025
gb|BM377872.2|BM377872 EBem04_SQ004_H02_R embryo, 12 DPA, n... 117 7e-025
gb|BM375997.2|BM375997 EBma01_SQ002_A14_R maternal, 4 DPA, ... 117 7e-025
gb|BJ468914.1|BJ468914 BJ468914 K. Sato unpublished cDNA li... 115 3e-024
gb|BQ464734.1|BQ464734 HU01C19T HU Hordeum vulgare subsp. v... 115 3e-024
gb|BM375219.2|BM375219 EBem06_SQ002_L09_R embryo, 21 DPA, n... 115 3e-024
gb|BM369863.2|BM369863 EBem07_SQ004_N08_R embryo, 28 DPA, n... 115 3e-024
gb|BM442747.2|BM442747 EBro02_SQ001_B03_R root, 3 week, hyd... 115 3e-024
gb|BM442922.2|BM442922 EBro02_SQ001_N16_R root, 3 week, hyd... 115 3e-024
gb|BM442924.2|BM442924 EBro02_SQ001_N18_R root, 3 week, hyd... 115 3e-024
gb|BI777991.2|BI777991 EBro07_SQ001_L06_R root, 3 week, red... 115 3e-024
gb|BQ765551.1|BQ765551 EBro03_SQ007_B13_R root, 3 week, wat... 115 3e-024
gb|BU972543.1|BU972543 HB21P06r BC Hordeum vulgare subsp. v... 115 3e-024
gb|BU978532.1|BU978532 HA13I05r HA Hordeum vulgare subsp. v... 115 3e-024
gb|BU979708.1|BU979708 HA17A06r HA Hordeum vulgare subsp. v... 115 3e-024
gb|BU979881.1|BU979881 HA17K20r HA Hordeum vulgare subsp. v... 115 3e-024
gb|BU982867.1|BU982867 HA27N15r HA Hordeum vulgare subsp. v... 115 3e-024
gb|BU985360.1|BU985360 HF06O13r HF Hordeum vulgare subsp. v... 115 3e-024
gb|CA021675.1|CA021675 HZ40M09r HZ Hordeum vulgare subsp. v... 115 3e-024
gb|CA023214.1|CA023214 HZ45J04r HZ Hordeum vulgare subsp. v... 115 3e-024
gb|CA026861.1|CA026861 HZ57C23r HZ Hordeum vulgare subsp. v... 115 3e-024
gb|CV053593.1|CV053593 BNEL101a12 Barley EST endosperm libr... 113 1e-023
gb|BE420659.1|BE420659 HWM001.B12 ITEC HWM Barley Leaf Libr... 107 7e-022
gb|BQ467758.1|BQ467758 HS04M17r HS Hordeum vulgare subsp. v... 107 7e-022
gb|BM368150.2|BM368150 EBed01_SQ002_F03_R endosperm, 6 DPA,... 107 7e-022
gb|BM368519.2|BM368519 EBem08_SQ002_J14_R embryo, 40 DPA, n... 107 7e-022
gb|BU978866.1|BU978866 HA14H23r HA Hordeum vulgare subsp. v... 107 7e-022
gb|BF622483.2|BF622483 HVSMEa0004I12f Hordeum vulgare seedl... 101 4e-020
gb|BM098501.2|BM098501 EBem08_SQ003_D22_R embryo, 40 DPA, n... 100 2e-019
gb|AJ460842.1|AJ460842 AJ460842 S00002 Hordeum vulgare subs... 94 1e-017
gb|BI949333.1|BI949333 HVSMEl0013G10f Hordeum vulgare spike... 92 4e-017
gb|BJ457326.1|BJ457326 BJ457326 K. Sato unpublished cDNA li... 90 2e-016
gb|BF623885.2|BF623885 HVSMEa0007H19f Hordeum vulgare seedl... 80 1e-013
gb|BF254713.2|BF254713 HVSMEf0004M23f Hordeum vulgare seedl... 80 1e-013
gb|AV916912.1|AV916912 AV916912 K. Sato unpublished cDNA li... 80 1e-013
gb|AJ460846.1|AJ460846 AJ460846 S00002 Hordeum vulgare subs... 80 1e-013
gb|BJ463993.1|BJ463993 BJ463993 K. Sato unpublished cDNA li... 80 1e-013
gb|BM440956.2|BM440956 EBed02_SQ002_A04_R endosperm, 8 DPA,... 80 1e-013
gb|BM443321.2|BM443321 EBro02_SQ003_J07_R root, 3 week, hyd... 80 1e-013
gb|BI777506.2|BI777506 EBro04_SQ001_G23_R root, 3 week, sal... 80 1e-013
gb|BQ759936.1|BQ759936 EBpi05_SQ004_L21 _R pistil, 8 DPA, n... 80 1e-013
gb|BU967897.1|BU967897 HB05L09r BC Hordeum vulgare subsp. v... 80 1e-013
gb|BU969452.1|BU969452 HB11J03r BC Hordeum vulgare subsp. v... 80 1e-013
gb|BU974588.1|BU974588 HB28G24r BC Hordeum vulgare subsp. v... 80 1e-013
gb|BU980581.1|BU980581 HA21B08r HA Hordeum vulgare subsp. v... 80 1e-013
gb|CA025796.1|CA025796 HZ53C19r HZ Hordeum vulgare subsp. v... 80 1e-013
gb|CA027052.1|CA027052 HZ57M04r HZ Hordeum vulgare subsp. v... 80 1e-013
gb|AJ460849.1|AJ460849 AJ460849 S00002 Hordeum vulgare subs... 78 6e-013
gb|BJ470515.1|BJ470515 BJ470515 K. Sato unpublished cDNA li... 78 6e-013
gb|AV921235.1|AV921235 AV921235 K. Sato unpublished cDNA li... 76 2e-012
gb|BQ758133.1|BQ758133 EBma01_SQ003_A23_R maternal, 4 DPA, ... 76 2e-012
gb|BU973310.1|BU973310 HB24H19r BC Hordeum vulgare subsp. v... 72 4e-011
gb|CA024744.1|CA024744 HZ50C22r HZ Hordeum vulgare subsp. v... 72 4e-011
gb|AV914078.1|AV914078 AV914078 K. Sato unpublished cDNA li... 70 1e-010
gb|BQ756422.1|BQ756422 EBem08_SQ003_D05_R embryo, 40 DPA, n... 66 2e-009
gb|BI947021.1|BI947021 HVSMEl0003D21f Hordeum vulgare spike... 64 9e-009
gb|AV926109.1|AV926109 AV926109 K. Sato unpublished cDNA li... 64 9e-009
gb|BJ449908.1|BJ449908 BJ449908 K. Sato unpublished cDNA li... 62 4e-008
gb|BQ459567.1|BQ459567 HA08L23r HA Hordeum vulgare subsp. v... 62 4e-008
gb|BM444962.2|BM444962 EBem09_SQ007_A10_R embryo, 1 Day ger... 60 1e-007
gb|AJ460848.1|AJ460848 AJ460848 S00002 Hordeum vulgare subs... 56 2e-006
gb|BI955234.1|BI955234 HVSMEm0022A21f Hordeum vulgare green... 46 0.002
gb|BM376133.1|BM376133 EBma01_SQ002_H07_R maternal, 4 DPA, ... 44 0.008
gb|BM442340.2|BM442340 EBan01_SQ002_O19_R anther, yellow st... 44 0.008
gb|BM376094.2|BM376094 EBma01_SQ002_F09_R maternal, 4 DPA, ... 44 0.008
gb|BM928834.1|BM928834 LP10007 Lemma/palea-enriched cDNA li... 42 0.033
gb|BM928858.1|BM928858 LP20059 Lemma/palea-enriched cDNA li... 42 0.033
gb|BQ134683.1|BQ134683 LP30159 Lemma/palea-enriched cDNA li... 42 0.033
gb|BM376088.2|BM376088 EBma01_SQ002_F01_R maternal, 4 DPA, ... 42 0.033
gb|BM371381.2|BM371381 EBma08_SQ002_I05_R maternal, 28 DPA,... 42 0.033
gb|BM371382.2|BM371382 EBma08_SQ002_I06_R maternal, 28 DPA,... 42 0.033
gb|BM371429.2|BM371429 EBma08_SQ002_L04_R maternal, 28 DPA,... 42 0.033
gb|BQ756451.1|BQ756451 EBem08_SQ004_M13_R embryo, 40 DPA, n... 42 0.033
gb|AV832892.1|AV832892 AV832892 K. Sato unpublished cDNA li... 40 0.13
gb|BF625042.2|BF625042 HVSMEa0005J15f Hordeum vulgare seedl... 40 0.13
gb|BM928833.1|BM928833 LP10006 Lemma/palea-enriched cDNA li... 40 0.13
gb|BM928843.1|BM928843 LP10030 Lemma/palea-enriched cDNA li... 40 0.13
gb|BQ134670.1|BQ134670 LP30108 Lemma/palea-enriched cDNA li... 40 0.13
gb|BM371428.2|BM371428 EBma08_SQ002_L03_R maternal, 28 DPA,... 40 0.13
gb|CD240764.1|CD240764 LP30021 Lemma/palea-enriched cDNA li... 40 0.13
>gb|BQ767871.1|BQ767871 EBro08_SQ010_G01_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ010_G01 5', mRNA sequence
Length = 591
Score = 458 bits (231), Expect = e-127
Identities = 437/503 (86%), Gaps = 2/503 (0%)
Strand = Plus / Minus
Query: 355 gttgtcagcctctttcttcacaggctcttccttctctgacagaatcagctcaatgtggca 414
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 552 gttgtcagcctctttcttcacaggctcttccttctctgacaagatcagctcaatgtggca 493
Query: 415 aggggaggacatgtaagggttaatgcgtccgtgagcacggtaggtgcggcgcctctgctt 474
||| ||||||||||||||| |||||||| ||||||||||| || ||||||||||||||
Sbjct: 492 ggggttggacatgtaagggttgatgcgtccatgagcacggtacgtccggcgcctctgctt 433
Query: 475 ctgggcttggttcacctggatgtgtgaaacatagaggttgtccacgtccaagcctttcac 534
|||||||||||||||||||||||||||| ||||||||||| || ||||||||||| ||
Sbjct: 432 ttgggcttggttcacctggatgtgtgaaatgtagaggttgtcgacatccaagcctttaac 373
Query: 535 atcagcgttactctcagcattcttcagcaaatccaatatgaacctggctgacttaacagg 594
|||||||||||||||||||||||||||||||||| | |||| ||| ||||| ||||
Sbjct: 372 ttcagcgttactctcagcattcttcagcaaatccagcacgaactgggccgactttgcagg 313
Query: 595 ccagcgaccctgcccattggagtggcgagactttgcttgtgcggtgcgaccaacacctcc 654
|||||||||||||||||| | ||||| |||| ||||||| || || || |||||||
Sbjct: 312 ccagcgaccctgcccatttggctggcggttctttacttgtgcagtacggcccacacctct 253
Query: 655 acagtatctccggaagggaattgcctgcttgtgagcaataacatcctcaaggtatcgctt 714
|||||||| |||||||||||||| ||||||||||| | ||||||||||||||| | |||
Sbjct: 252 gcagtatctacggaagggaattgcttgcttgtgagcgagaacatcctcaaggtacctctt 193
Query: 715 agccttggtcaaaggcagcttgcgaagcgcaaaagctgtctcccttgtgttcttgaagtg 774
||||||| |||||||| | ||||||| || ||||||||||| | |||||||||||||||
Sbjct: 192 agccttgcccaaaggcatcctgcgaagagcgaaagctgtctcgcgtgtgttcttgaagtg 133
Query: 775 gaccctcaggtcccttcc-catggccttggccgatttggtagggttgcccggctcctgcg 833
|||||| || ||| | || ||| ||||||||||| ||||| |||||| ||| ||| ||
Sbjct: 132 gaccctgagatccttgccacat-gccttggccgacttggtcgggttggacggatccctcg 74
Query: 834 agtacttaaccatagcggcggcg 856
||||||| ||||| |||||||||
Sbjct: 73 agtacttcaccatggcggcggcg 51
>gb|BQ768100.1|BQ768100 EBro08_SQ010_N18_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ010_N18 5', mRNA sequence
Length = 655
Score = 458 bits (231), Expect = e-127
Identities = 437/503 (86%), Gaps = 2/503 (0%)
Strand = Plus / Minus
Query: 355 gttgtcagcctctttcttcacaggctcttccttctctgacagaatcagctcaatgtggca 414
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 553 gttgtcagcctctttcttcacaggctcttccttctctgacaagatcagctcaatgtggca 494
Query: 415 aggggaggacatgtaagggttaatgcgtccgtgagcacggtaggtgcggcgcctctgctt 474
||| ||||||||||||||| |||||||| ||||||||||| || ||||||||||||||
Sbjct: 493 ggggttggacatgtaagggttgatgcgtccatgagcacggtacgtccggcgcctctgctt 434
Query: 475 ctgggcttggttcacctggatgtgtgaaacatagaggttgtccacgtccaagcctttcac 534
|||||||||||||||||||||||||||| ||||||||||| || ||||||||||| ||
Sbjct: 433 ttgggcttggttcacctggatgtgtgaaatgtagaggttgtcgacatccaagcctttaac 374
Query: 535 atcagcgttactctcagcattcttcagcaaatccaatatgaacctggctgacttaacagg 594
|||||||||||||||||||||||||||||||||| | |||| ||| ||||| ||||
Sbjct: 373 ttcagcgttactctcagcattcttcagcaaatccagcacgaactgggccgactttgcagg 314
Query: 595 ccagcgaccctgcccattggagtggcgagactttgcttgtgcggtgcgaccaacacctcc 654
|||||||||||||||||| | ||||| |||| ||||||| || || || |||||||
Sbjct: 313 ccagcgaccctgcccatttggctggcggttctttacttgtgcagtacggcccacacctct 254
Query: 655 acagtatctccggaagggaattgcctgcttgtgagcaataacatcctcaaggtatcgctt 714
|||||||| |||||||||||||| ||||||||||| | ||||||||||||||| | |||
Sbjct: 253 gcagtatctacggaagggaattgcttgcttgtgagcgagaacatcctcaaggtacctctt 194
Query: 715 agccttggtcaaaggcagcttgcgaagcgcaaaagctgtctcccttgtgttcttgaagtg 774
||||||| |||||||| | ||||||| || ||||||||||| | |||||||||||||||
Sbjct: 193 agccttgcccaaaggcatcctgcgaagagcgaaagctgtctcgcgtgtgttcttgaagtg 134
Query: 775 gaccctcaggtcccttcc-catggccttggccgatttggtagggttgcccggctcctgcg 833
|||||| || ||| | || ||| ||||||||||| ||||| |||||| ||| ||| ||
Sbjct: 133 gaccctgagatccttgccacat-gccttggccgacttggtcgggttggacggatccctcg 75
Query: 834 agtacttaaccatagcggcggcg 856
||||||| ||||| |||||||||
Sbjct: 74 agtacttcaccatggcggcggcg 52
>gb|AL504092.1|AL504092 AL504092 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW04C22V 5', mRNA sequence
Length = 699
Score = 450 bits (227), Expect = e-125
Identities = 436/503 (86%), Gaps = 2/503 (0%)
Strand = Plus / Minus
Query: 355 gttgtcagcctctttcttcacaggctcttccttctctgacagaatcagctcaatgtggca 414
|||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 527 gttgtcagcctccttcttcacaggctcttccttctctgacaagatcagctcaatgtggca 468
Query: 415 aggggaggacatgtaagggttaatgcgtccgtgagcacggtaggtgcggcgcctctgctt 474
||| ||||||||||||||| |||||||| ||||||||||| || ||||||||||||||
Sbjct: 467 ggggttggacatgtaagggttgatgcgtccatgagcacggtacgtccggcgcctctgctt 408
Query: 475 ctgggcttggttcacctggatgtgtgaaacatagaggttgtccacgtccaagcctttcac 534
|||||||||||||||||||||||||||| ||||||||||| || ||||||||||| ||
Sbjct: 407 ttgggcttggttcacctggatgtgtgaaatgtagaggttgtcgacatccaagcctttaac 348
Query: 535 atcagcgttactctcagcattcttcagcaaatccaatatgaacctggctgacttaacagg 594
|||||||||||||||||||||||||||||||||| | |||| ||| ||||| ||||
Sbjct: 347 ttcagcgttactctcagcattcttcagcaaatccagcacgaactgggccgactttgcagg 288
Query: 595 ccagcgaccctgcccattggagtggcgagactttgcttgtgcggtgcgaccaacacctcc 654
|||||||||||||||||| | ||||| |||| ||||||| || || || |||||||
Sbjct: 287 ccagcgaccctgcccatttggctggcggttctttacttgtgcagtacggcccacacctct 228
Query: 655 acagtatctccggaagggaattgcctgcttgtgagcaataacatcctcaaggtatcgctt 714
|||||||| |||||||||||||| ||||||||||| | ||||||||||||||| | |||
Sbjct: 227 gcagtatctacggaagggaattgcttgcttgtgagcgagaacatcctcaaggtacctctt 168
Query: 715 agccttggtcaaaggcagcttgcgaagcgcaaaagctgtctcccttgtgttcttgaagtg 774
||||||| |||||||| | ||||||| || ||||||||||| | |||||||||||||||
Sbjct: 167 agccttgcccaaaggcatcctgcgaagagcgaaagctgtctcgcgtgtgttcttgaagtg 108
Query: 775 gaccctcaggtcccttcc-catggccttggccgatttggtagggttgcccggctcctgcg 833
|||||| || ||| | || ||| ||||||||||| ||||| |||||| ||| ||| ||
Sbjct: 107 gaccctgagatccttgccacat-gccttggccgacttggtcgggttggacggatccctcg 49
Query: 834 agtacttaaccatagcggcggcg 856
||||||| ||||| |||||||||
Sbjct: 48 agtacttcaccatggcggcggcg 26
>gb|AL508606.1|AL508606 AL508606 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY09E04V 5',
mRNA sequence
Length = 686
Score = 450 bits (227), Expect = e-125
Identities = 436/503 (86%), Gaps = 2/503 (0%)
Strand = Plus / Minus
Query: 355 gttgtcagcctctttcttcacaggctcttccttctctgacagaatcagctcaatgtggca 414
|||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 524 gttgtcagcctccttcttcacaggctcttccttctctgacaagatcagctcaatgtggca 465
Query: 415 aggggaggacatgtaagggttaatgcgtccgtgagcacggtaggtgcggcgcctctgctt 474
||| ||||||||||||||| |||||||| ||||||||||| || ||||||||||||||
Sbjct: 464 ggggttggacatgtaagggttgatgcgtccatgagcacggtacgtccggcgcctctgctt 405
Query: 475 ctgggcttggttcacctggatgtgtgaaacatagaggttgtccacgtccaagcctttcac 534
|||||||||||||||||||||||||||| ||||||||||| || ||||||||||| ||
Sbjct: 404 ttgggcttggttcacctggatgtgtgaaatgtagaggttgtcgacatccaagcctttaac 345
Query: 535 atcagcgttactctcagcattcttcagcaaatccaatatgaacctggctgacttaacagg 594
|||||||||||||||||||||||||||||||||| | |||| ||| ||||| ||||
Sbjct: 344 ttcagcgttactctcagcattcttcagcaaatccagcacgaactgggccgactttgcagg 285
Query: 595 ccagcgaccctgcccattggagtggcgagactttgcttgtgcggtgcgaccaacacctcc 654
|||||||||||||||||| | ||||| |||| ||||||| || || || |||||||
Sbjct: 284 ccagcgaccctgcccatttggctggcggttctttacttgtgcagtacggcccacacctct 225
Query: 655 acagtatctccggaagggaattgcctgcttgtgagcaataacatcctcaaggtatcgctt 714
|||||||| |||||||||||||| ||||||||||| | ||||||||||||||| | |||
Sbjct: 224 gcagtatctacggaagggaattgcttgcttgtgagcgagaacatcctcaaggtacctctt 165
Query: 715 agccttggtcaaaggcagcttgcgaagcgcaaaagctgtctcccttgtgttcttgaagtg 774
||||||| |||||||| | ||||||| || ||||||||||| | |||||||||||||||
Sbjct: 164 agccttgcccaaaggcatcctgcgaagagcgaaagctgtctcgcgtgtgttcttgaagtg 105
Query: 775 gaccctcaggtcccttcc-catggccttggccgatttggtagggttgcccggctcctgcg 833
|||||| || ||| | || ||| ||||||||||| ||||| |||||| ||| ||| ||
Sbjct: 104 gaccctgagatccttgccacat-gccttggccgacttggtcgggttggacggatccctcg 46
Query: 834 agtacttaaccatagcggcggcg 856
||||||| ||||| |||||||||
Sbjct: 45 agtacttcaccatggcggcggcg 23
>gb|BF621740.1|BF621740 HVSMEa0012D19f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0012D19f, mRNA sequence
Length = 829
Score = 450 bits (227), Expect = e-125
Identities = 436/503 (86%), Gaps = 2/503 (0%)
Strand = Plus / Minus
Query: 355 gttgtcagcctctttcttcacaggctcttccttctctgacagaatcagctcaatgtggca 414
|||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 552 gttgtcagcctccttcttcacaggctcttccttctctgacaagatcagctcaatgtggca 493
Query: 415 aggggaggacatgtaagggttaatgcgtccgtgagcacggtaggtgcggcgcctctgctt 474
||| ||||||||||||||| |||||||| ||||||||||| || ||||||||||||||
Sbjct: 492 ggggttggacatgtaagggttgatgcgtccatgagcacggtacgtccggcgcctctgctt 433
Query: 475 ctgggcttggttcacctggatgtgtgaaacatagaggttgtccacgtccaagcctttcac 534
|||||||||||||||||||||||||||| ||||||||||| || ||||||||||| ||
Sbjct: 432 ttgggcttggttcacctggatgtgtgaaatgtagaggttgtcgacatccaagcctttaac 373
Query: 535 atcagcgttactctcagcattcttcagcaaatccaatatgaacctggctgacttaacagg 594
|||||||||||||||||||||||||||||||||| | |||| ||| ||||| ||||
Sbjct: 372 ttcagcgttactctcagcattcttcagcaaatccagcacgaactgggccgactttgcagg 313
Query: 595 ccagcgaccctgcccattggagtggcgagactttgcttgtgcggtgcgaccaacacctcc 654
|||||||||||||||||| | ||||| |||| ||||||| || || || |||||||
Sbjct: 312 ccagcgaccctgcccatttggctggcggttctttacttgtgcagtacggcccacacctct 253
Query: 655 acagtatctccggaagggaattgcctgcttgtgagcaataacatcctcaaggtatcgctt 714
|||||||| |||||||||||||| ||||||||||| | ||||||||||||||| | |||
Sbjct: 252 gcagtatctacggaagggaattgcttgcttgtgagcgagaacatcctcaaggtacctctt 193
Query: 715 agccttggtcaaaggcagcttgcgaagcgcaaaagctgtctcccttgtgttcttgaagtg 774
||||||| |||||||| | ||||||| || ||||||||||| | |||||||||||||||
Sbjct: 192 agccttgcccaaaggcatcctgcgaagagcgaaagctgtctcgcgtgtgttcttgaagtg 133
Query: 775 gaccctcaggtcccttcc-catggccttggccgatttggtagggttgcccggctcctgcg 833
|||||| || ||| | || ||| ||||||||||| ||||| |||||| ||| ||| ||
Sbjct: 132 gaccctgagatccttgccacat-gccttggccgacttggtcgggttggacggatccctcg 74
Query: 834 agtacttaaccatagcggcggcg 856
||||||| ||||| |||||||||
Sbjct: 73 agtacttcaccatggcggcggcg 51
>gb|AV915973.1|AV915973 AV915973 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags16o20 5', mRNA sequence
Length = 649
Score = 450 bits (227), Expect = e-125
Identities = 436/503 (86%), Gaps = 2/503 (0%)
Strand = Plus / Minus
Query: 355 gttgtcagcctctttcttcacaggctcttccttctctgacagaatcagctcaatgtggca 414
|||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 574 gttgtcagcctccttcttcacaggctcttccttctctgacaagatcagctcaatgtggca 515
Query: 415 aggggaggacatgtaagggttaatgcgtccgtgagcacggtaggtgcggcgcctctgctt 474
||| ||||||||||||||| |||||||| ||||||||||| || ||||||||||||||
Sbjct: 514 ggggttggacatgtaagggttgatgcgtccatgagcacggtacgtccggcgcctctgctt 455
Query: 475 ctgggcttggttcacctggatgtgtgaaacatagaggttgtccacgtccaagcctttcac 534
|||||||||||||||||||||||||||| ||||||||||| || ||||||||||| ||
Sbjct: 454 ttgggcttggttcacctggatgtgtgaaatgtagaggttgtcgacatccaagcctttaac 395
Query: 535 atcagcgttactctcagcattcttcagcaaatccaatatgaacctggctgacttaacagg 594
|||||||||||||||||||||||||||||||||| | |||| ||| ||||| ||||
Sbjct: 394 ttcagcgttactctcagcattcttcagcaaatccagcacgaactgggccgactttgcagg 335
Query: 595 ccagcgaccctgcccattggagtggcgagactttgcttgtgcggtgcgaccaacacctcc 654
|||||||||||||||||| | ||||| |||| ||||||| || || || |||||||
Sbjct: 334 ccagcgaccctgcccatttggctggcggttctttacttgtgcagtacggcccacacctct 275
Query: 655 acagtatctccggaagggaattgcctgcttgtgagcaataacatcctcaaggtatcgctt 714
|||||||| |||||||||||||| ||||||||||| | ||||||||||||||| | |||
Sbjct: 274 gcagtatctacggaagggaattgcttgcttgtgagcgagaacatcctcaaggtacctctt 215
Query: 715 agccttggtcaaaggcagcttgcgaagcgcaaaagctgtctcccttgtgttcttgaagtg 774
||||||| |||||||| | ||||||| || ||||||||||| | |||||||||||||||
Sbjct: 214 agccttgcccaaaggcatcctgcgaagagcgaaagctgtctcgcgtgtgttcttgaagtg 155
Query: 775 gaccctcaggtcccttcc-catggccttggccgatttggtagggttgcccggctcctgcg 833
|||||| || ||| | || ||| ||||||||||| ||||| |||||| ||| ||| ||
Sbjct: 154 gaccctgagatccttgccacat-gccttggccgacttggtcgggttggacggatccctcg 96
Query: 834 agtacttaaccatagcggcggcg 856
||||||| ||||| |||||||||
Sbjct: 95 agtacttcaccatggcggcggcg 73
>gb|BM099350.2|BM099350 EBes01_SQ002_P20_R embryo sac, 4-6 DPA, no treatment, cv Optic,
EBes01 Hordeum vulgare subsp. vulgare cDNA clone
EBes01_SQ002_P20 5', mRNA sequence
Length = 636
Score = 450 bits (227), Expect = e-125
Identities = 436/503 (86%), Gaps = 2/503 (0%)
Strand = Plus / Minus
Query: 355 gttgtcagcctctttcttcacaggctcttccttctctgacagaatcagctcaatgtggca 414
|||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 546 gttgtcagcctccttcttcacaggctcttccttctctgacaagatcagctcaatgtggca 487
Query: 415 aggggaggacatgtaagggttaatgcgtccgtgagcacggtaggtgcggcgcctctgctt 474
||| ||||||||||||||| |||||||| ||||||||||| || ||||||||||||||
Sbjct: 486 ggggttggacatgtaagggttgatgcgtccatgagcacggtacgtccggcgcctctgctt 427
Query: 475 ctgggcttggttcacctggatgtgtgaaacatagaggttgtccacgtccaagcctttcac 534
|||||||||||||||||||||||||||| ||||||||||| || ||||||||||| ||
Sbjct: 426 ttgggcttggttcacctggatgtgtgaaatgtagaggttgtcgacatccaagcctttaac 367
Query: 535 atcagcgttactctcagcattcttcagcaaatccaatatgaacctggctgacttaacagg 594
|||||||||||||||||||||||||||||||||| | |||| ||| ||||| ||||
Sbjct: 366 ttcagcgttactctcagcattcttcagcaaatccagcacgaactgggccgactttgcagg 307
Query: 595 ccagcgaccctgcccattggagtggcgagactttgcttgtgcggtgcgaccaacacctcc 654
|||||||||||||||||| | ||||| |||| ||||||| || || || |||||||
Sbjct: 306 ccagcgaccctgcccatttggctggcggttctttacttgtgcagtacggcccacacctct 247
Query: 655 acagtatctccggaagggaattgcctgcttgtgagcaataacatcctcaaggtatcgctt 714
|||||||| |||||||||||||| ||||||||||| | ||||||||||||||| | |||
Sbjct: 246 gcagtatctacggaagggaattgcttgcttgtgagcgagaacatcctcaaggtacctctt 187
Query: 715 agccttggtcaaaggcagcttgcgaagcgcaaaagctgtctcccttgtgttcttgaagtg 774
||||||| |||||||| | ||||||| || ||||||||||| | |||||||||||||||
Sbjct: 186 agccttgcccaaaggcatcctgcgaagagcgaaagctgtctcgcgtgtgttcttgaagtg 127
Query: 775 gaccctcaggtcccttcc-catggccttggccgatttggtagggttgcccggctcctgcg 833
|||||| || ||| | || ||| ||||||||||| ||||| |||||| ||| ||| ||
Sbjct: 126 gaccctgagatccttgccacat-gccttggccgacttggtcgggttggacggatccctcg 68
Query: 834 agtacttaaccatagcggcggcg 856
||||||| ||||| |||||||||
Sbjct: 67 agtacttcaccatggcggcggcg 45
>gb|BU983664.1|BU983664 HA30I04r HA Hordeum vulgare subsp. vulgare cDNA clone HA30I04
5-PRIME, mRNA sequence
Length = 568
Score = 450 bits (227), Expect = e-125
Identities = 436/503 (86%), Gaps = 2/503 (0%)
Strand = Plus / Minus
Query: 355 gttgtcagcctctttcttcacaggctcttccttctctgacagaatcagctcaatgtggca 414
|||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 539 gttgtcagcctccttcttcacaggctcttccttctctgacaagatcagctcaatgtggca 480
Query: 415 aggggaggacatgtaagggttaatgcgtccgtgagcacggtaggtgcggcgcctctgctt 474
||| ||||||||||||||| |||||||| ||||||||||| || ||||||||||||||
Sbjct: 479 ggggttggacatgtaagggttgatgcgtccatgagcacggtacgtccggcgcctctgctt 420
Query: 475 ctgggcttggttcacctggatgtgtgaaacatagaggttgtccacgtccaagcctttcac 534
|||||||||||||||||||||||||||| ||||||||||| || ||||||||||| ||
Sbjct: 419 ttgggcttggttcacctggatgtgtgaaatgtagaggttgtcgacatccaagcctttaac 360
Query: 535 atcagcgttactctcagcattcttcagcaaatccaatatgaacctggctgacttaacagg 594
|||||||||||||||||||||||||||||||||| | |||| ||| ||||| ||||
Sbjct: 359 ttcagcgttactctcagcattcttcagcaaatccagcacgaactgggccgactttgcagg 300
Query: 595 ccagcgaccctgcccattggagtggcgagactttgcttgtgcggtgcgaccaacacctcc 654
|||||||||||||||||| | ||||| |||| ||||||| || || || |||||||
Sbjct: 299 ccagcgaccctgcccatttggctggcggttctttacttgtgcagtacggcccacacctct 240
Query: 655 acagtatctccggaagggaattgcctgcttgtgagcaataacatcctcaaggtatcgctt 714
|||||||| |||||||||||||| ||||||||||| | ||||||||||||||| | |||
Sbjct: 239 gcagtatctacggaagggaattgcttgcttgtgagcgagaacatcctcaaggtacctctt 180
Query: 715 agccttggtcaaaggcagcttgcgaagcgcaaaagctgtctcccttgtgttcttgaagtg 774
||||||| |||||||| | ||||||| || ||||||||||| | |||||||||||||||
Sbjct: 179 agccttgcccaaaggcatcctgcgaagagcgaaagctgtctcgcgtgtgttcttgaagtg 120
Query: 775 gaccctcaggtcccttcc-catggccttggccgatttggtagggttgcccggctcctgcg 833
|||||| || ||| | || ||| ||||||||||| ||||| |||||| ||| ||| ||
Sbjct: 119 gaccctgagatccttgccacat-gccttggccgacttggtcgggttggacggatccctcg 61
Query: 834 agtacttaaccatagcggcggcg 856
||||||| ||||| |||||||||
Sbjct: 60 agtacttcaccatggcggcggcg 38
>gb|BU985154.1|BU985154 HF06E18r HF Hordeum vulgare subsp. vulgare cDNA clone HF06E18
5-PRIME, mRNA sequence
Length = 581
Score = 450 bits (227), Expect = e-125
Identities = 436/503 (86%), Gaps = 2/503 (0%)
Strand = Plus / Minus
Query: 355 gttgtcagcctctttcttcacaggctcttccttctctgacagaatcagctcaatgtggca 414
|||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 551 gttgtcagcctccttcttcacaggctcttccttctctgacaagatcagctcaatgtggca 492
Query: 415 aggggaggacatgtaagggttaatgcgtccgtgagcacggtaggtgcggcgcctctgctt 474
||| ||||||||||||||| |||||||| ||||||||||| || ||||||||||||||
Sbjct: 491 ggggttggacatgtaagggttgatgcgtccatgagcacggtacgtccggcgcctctgctt 432
Query: 475 ctgggcttggttcacctggatgtgtgaaacatagaggttgtccacgtccaagcctttcac 534
|||||||||||||||||||||||||||| ||||||||||| || ||||||||||| ||
Sbjct: 431 ttgggcttggttcacctggatgtgtgaaatgtagaggttgtcgacatccaagcctttaac 372
Query: 535 atcagcgttactctcagcattcttcagcaaatccaatatgaacctggctgacttaacagg 594
|||||||||||||||||||||||||||||||||| | |||| ||| ||||| ||||
Sbjct: 371 ttcagcgttactctcagcattcttcagcaaatccagcacgaactgggccgactttgcagg 312
Query: 595 ccagcgaccctgcccattggagtggcgagactttgcttgtgcggtgcgaccaacacctcc 654
|||||||||||||||||| | ||||| |||| ||||||| || || || |||||||
Sbjct: 311 ccagcgaccctgcccatttggctggcggttctttacttgtgcagtacggcccacacctct 252
Query: 655 acagtatctccggaagggaattgcctgcttgtgagcaataacatcctcaaggtatcgctt 714
|||||||| |||||||||||||| ||||||||||| | ||||||||||||||| | |||
Sbjct: 251 gcagtatctacggaagggaattgcttgcttgtgagcgagaacatcctcaaggtacctctt 192
Query: 715 agccttggtcaaaggcagcttgcgaagcgcaaaagctgtctcccttgtgttcttgaagtg 774
||||||| |||||||| | ||||||| || ||||||||||| | |||||||||||||||
Sbjct: 191 agccttgcccaaaggcatcctgcgaagagcgaaagctgtctcgcgtgtgttcttgaagtg 132
Query: 775 gaccctcaggtcccttcc-catggccttggccgatttggtagggttgcccggctcctgcg 833
|||||| || ||| | || ||| ||||||||||| ||||| |||||| ||| ||| ||
Sbjct: 131 gaccctgagatccttgccacat-gccttggccgacttggtcgggttggacggatccctcg 73
Query: 834 agtacttaaccatagcggcggcg 856
||||||| ||||| |||||||||
Sbjct: 72 agtacttcaccatggcggcggcg 50
>gb|BU987909.1|BU987909 HF16B19r HF Hordeum vulgare subsp. vulgare cDNA clone HF16B19
5-PRIME, mRNA sequence
Length = 603
Score = 450 bits (227), Expect = e-125
Identities = 436/503 (86%), Gaps = 2/503 (0%)
Strand = Plus / Minus
Query: 355 gttgtcagcctctttcttcacaggctcttccttctctgacagaatcagctcaatgtggca 414
|||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 551 gttgtcagcctccttcttcacaggctcttccttctctgacaagatcagctcaatgtggca 492
Query: 415 aggggaggacatgtaagggttaatgcgtccgtgagcacggtaggtgcggcgcctctgctt 474
||| ||||||||||||||| |||||||| ||||||||||| || ||||||||||||||
Sbjct: 491 ggggttggacatgtaagggttgatgcgtccatgagcacggtacgtccggcgcctctgctt 432
Query: 475 ctgggcttggttcacctggatgtgtgaaacatagaggttgtccacgtccaagcctttcac 534
|||||||||||||||||||||||||||| ||||||||||| || ||||||||||| ||
Sbjct: 431 ttgggcttggttcacctggatgtgtgaaatgtagaggttgtcgacatccaagcctttaac 372
Query: 535 atcagcgttactctcagcattcttcagcaaatccaatatgaacctggctgacttaacagg 594
|||||||||||||||||||||||||||||||||| | |||| ||| ||||| ||||
Sbjct: 371 ttcagcgttactctcagcattcttcagcaaatccagcacgaactgggccgactttgcagg 312
Query: 595 ccagcgaccctgcccattggagtggcgagactttgcttgtgcggtgcgaccaacacctcc 654
|||||||||||||||||| | ||||| |||| ||||||| || || || |||||||
Sbjct: 311 ccagcgaccctgcccatttggctggcggttctttacttgtgcagtacggcccacacctct 252
Query: 655 acagtatctccggaagggaattgcctgcttgtgagcaataacatcctcaaggtatcgctt 714
|||||||| |||||||||||||| ||||||||||| | ||||||||||||||| | |||
Sbjct: 251 gcagtatctacggaagggaattgcttgcttgtgagcgagaacatcctcaaggtacctctt 192
Query: 715 agccttggtcaaaggcagcttgcgaagcgcaaaagctgtctcccttgtgttcttgaagtg 774
||||||| |||||||| | ||||||| || ||||||||||| | |||||||||||||||
Sbjct: 191 agccttgcccaaaggcatcctgcgaagagcgaaagctgtctcgcgtgtgttcttgaagtg 132
Query: 775 gaccctcaggtcccttcc-catggccttggccgatttggtagggttgcccggctcctgcg 833
|||||| || ||| | || ||| ||||||||||| ||||| |||||| ||| ||| ||
Sbjct: 131 gaccctgagatccttgccacat-gccttggccgacttggtcgggttggacggatccctcg 73
Query: 834 agtacttaaccatagcggcggcg 856
||||||| ||||| |||||||||
Sbjct: 72 agtacttcaccatggcggcggcg 50
>gb|BU988068.1|BU988068 HF16J05r HF Hordeum vulgare subsp. vulgare cDNA clone HF16J05
5-PRIME, mRNA sequence
Length = 602
Score = 450 bits (227), Expect = e-125
Identities = 436/503 (86%), Gaps = 2/503 (0%)
Strand = Plus / Minus
Query: 355 gttgtcagcctctttcttcacaggctcttccttctctgacagaatcagctcaatgtggca 414
|||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 551 gttgtcagcctccttcttcacaggctcttccttctctgacaagatcagctcaatgtggca 492
Query: 415 aggggaggacatgtaagggttaatgcgtccgtgagcacggtaggtgcggcgcctctgctt 474
||| ||||||||||||||| |||||||| ||||||||||| || ||||||||||||||
Sbjct: 491 ggggttggacatgtaagggttgatgcgtccatgagcacggtacgtccggcgcctctgctt 432
Query: 475 ctgggcttggttcacctggatgtgtgaaacatagaggttgtccacgtccaagcctttcac 534
|||||||||||||||||||||||||||| ||||||||||| || ||||||||||| ||
Sbjct: 431 ttgggcttggttcacctggatgtgtgaaatgtagaggttgtcgacatccaagcctttaac 372
Query: 535 atcagcgttactctcagcattcttcagcaaatccaatatgaacctggctgacttaacagg 594
|||||||||||||||||||||||||||||||||| | |||| ||| ||||| ||||
Sbjct: 371 ttcagcgttactctcagcattcttcagcaaatccagcacgaactgggccgactttgcagg 312
Query: 595 ccagcgaccctgcccattggagtggcgagactttgcttgtgcggtgcgaccaacacctcc 654
|||||||||||||||||| | ||||| |||| ||||||| || || || |||||||
Sbjct: 311 ccagcgaccctgcccatttggctggcggttctttacttgtgcagtacggcccacacctct 252
Query: 655 acagtatctccggaagggaattgcctgcttgtgagcaataacatcctcaaggtatcgctt 714
|||||||| |||||||||||||| ||||||||||| | ||||||||||||||| | |||
Sbjct: 251 gcagtatctacggaagggaattgcttgcttgtgagcgagaacatcctcaaggtacctctt 192
Query: 715 agccttggtcaaaggcagcttgcgaagcgcaaaagctgtctcccttgtgttcttgaagtg 774
||||||| |||||||| | ||||||| || ||||||||||| | |||||||||||||||
Sbjct: 191 agccttgcccaaaggcatcctgcgaagagcgaaagctgtctcgcgtgtgttcttgaagtg 132
Query: 775 gaccctcaggtcccttcc-catggccttggccgatttggtagggttgcccggctcctgcg 833
|||||| || ||| | || ||| ||||||||||| ||||| |||||| ||| ||| ||
Sbjct: 131 gaccctgagatccttgccacat-gccttggccgacttggtcgggttggacggatccctcg 73
Query: 834 agtacttaaccatagcggcggcg 856
||||||| ||||| |||||||||
Sbjct: 72 agtacttcaccatggcggcggcg 50
>gb|CA021007.1|CA021007 HZ38L24r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ38L24
5-PRIME, mRNA sequence
Length = 564
Score = 450 bits (227), Expect = e-125
Identities = 436/503 (86%), Gaps = 2/503 (0%)
Strand = Plus / Minus
Query: 355 gttgtcagcctctttcttcacaggctcttccttctctgacagaatcagctcaatgtggca 414
|||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 545 gttgtcagcctccttcttcacaggctcttccttctctgacaagatcagctcaatgtggca 486
Query: 415 aggggaggacatgtaagggttaatgcgtccgtgagcacggtaggtgcggcgcctctgctt 474
||| ||||||||||||||| |||||||| ||||||||||| || ||||||||||||||
Sbjct: 485 ggggttggacatgtaagggttgatgcgtccatgagcacggtacgtccggcgcctctgctt 426
Query: 475 ctgggcttggttcacctggatgtgtgaaacatagaggttgtccacgtccaagcctttcac 534
|||||||||||||||||||||||||||| ||||||||||| || ||||||||||| ||
Sbjct: 425 ttgggcttggttcacctggatgtgtgaaatgtagaggttgtcgacatccaagcctttaac 366
Query: 535 atcagcgttactctcagcattcttcagcaaatccaatatgaacctggctgacttaacagg 594
|||||||||||||||||||||||||||||||||| | |||| ||| ||||| ||||
Sbjct: 365 ttcagcgttactctcagcattcttcagcaaatccagcacgaactgggccgactttgcagg 306
Query: 595 ccagcgaccctgcccattggagtggcgagactttgcttgtgcggtgcgaccaacacctcc 654
|||||||||||||||||| | ||||| |||| ||||||| || || || |||||||
Sbjct: 305 ccagcgaccctgcccatttggctggcggttctttacttgtgcagtacggcccacacctct 246
Query: 655 acagtatctccggaagggaattgcctgcttgtgagcaataacatcctcaaggtatcgctt 714
|||||||| |||||||||||||| ||||||||||| | ||||||||||||||| | |||
Sbjct: 245 gcagtatctacggaagggaattgcttgcttgtgagcgagaacatcctcaaggtacctctt 186
Query: 715 agccttggtcaaaggcagcttgcgaagcgcaaaagctgtctcccttgtgttcttgaagtg 774
||||||| |||||||| | ||||||| || ||||||||||| | |||||||||||||||
Sbjct: 185 agccttgcccaaaggcatcctgcgaagagcgaaagctgtctcgcgtgtgttcttgaagtg 126
Query: 775 gaccctcaggtcccttcc-catggccttggccgatttggtagggttgcccggctcctgcg 833
|||||| || ||| | || ||| ||||||||||| ||||| |||||| ||| ||| ||
Sbjct: 125 gaccctgagatccttgccacat-gccttggccgacttggtcgggttggacggatccctcg 67
Query: 834 agtacttaaccatagcggcggcg 856
||||||| ||||| |||||||||
Sbjct: 66 agtacttcaccatggcggcggcg 44
>gb|CA021430.1|CA021430 HZ40B09r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ40B09
5-PRIME, mRNA sequence
Length = 565
Score = 450 bits (227), Expect = e-125
Identities = 436/503 (86%), Gaps = 2/503 (0%)
Strand = Plus / Minus
Query: 355 gttgtcagcctctttcttcacaggctcttccttctctgacagaatcagctcaatgtggca 414
|||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 518 gttgtcagcctccttcttcacaggctcttccttctctgacaagatcagctcaatgtggca 459
Query: 415 aggggaggacatgtaagggttaatgcgtccgtgagcacggtaggtgcggcgcctctgctt 474
||| ||||||||||||||| |||||||| ||||||||||| || ||||||||||||||
Sbjct: 458 ggggttggacatgtaagggttgatgcgtccatgagcacggtacgtccggcgcctctgctt 399
Query: 475 ctgggcttggttcacctggatgtgtgaaacatagaggttgtccacgtccaagcctttcac 534
|||||||||||||||||||||||||||| ||||||||||| || ||||||||||| ||
Sbjct: 398 ttgggcttggttcacctggatgtgtgaaatgtagaggttgtcgacatccaagcctttaac 339
Query: 535 atcagcgttactctcagcattcttcagcaaatccaatatgaacctggctgacttaacagg 594
|||||||||||||||||||||||||||||||||| | |||| ||| ||||| ||||
Sbjct: 338 ttcagcgttactctcagcattcttcagcaaatccagcacgaactgggccgactttgcagg 279
Query: 595 ccagcgaccctgcccattggagtggcgagactttgcttgtgcggtgcgaccaacacctcc 654
|||||||||||||||||| | ||||| |||| ||||||| || || || |||||||
Sbjct: 278 ccagcgaccctgcccatttggctggcggttctttacttgtgcagtacggcccacacctct 219
Query: 655 acagtatctccggaagggaattgcctgcttgtgagcaataacatcctcaaggtatcgctt 714
|||||||| |||||||||||||| ||||||||||| | ||||||||||||||| | |||
Sbjct: 218 gcagtatctacggaagggaattgcttgcttgtgagcgagaacatcctcaaggtacctctt 159
Query: 715 agccttggtcaaaggcagcttgcgaagcgcaaaagctgtctcccttgtgttcttgaagtg 774
||||||| |||||||| | ||||||| || ||||||||||| | |||||||||||||||
Sbjct: 158 agccttgcccaaaggcatcctgcgaagagcgaaagctgtctcgcgtgtgttcttgaagtg 99
Query: 775 gaccctcaggtcccttcc-catggccttggccgatttggtagggttgcccggctcctgcg 833
|||||| || ||| | || ||| ||||||||||| ||||| |||||| ||| ||| ||
Sbjct: 98 gaccctgagatccttgccacat-gccttggccgacttggtcgggttggacggatccctcg 40
Query: 834 agtacttaaccatagcggcggcg 856
||||||| ||||| |||||||||
Sbjct: 39 agtacttcaccatggcggcggcg 17
>gb|CA030594.1|CA030594 HX07I09r HX Hordeum vulgare subsp. vulgare cDNA clone HX07I09
5-PRIME, mRNA sequence
Length = 595
Score = 450 bits (227), Expect = e-125
Identities = 436/503 (86%), Gaps = 2/503 (0%)
Strand = Plus / Minus
Query: 355 gttgtcagcctctttcttcacaggctcttccttctctgacagaatcagctcaatgtggca 414
|||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 562 gttgtcagcctccttcttcacaggctcttccttctctgacaagatcagctcaatgtggca 503
Query: 415 aggggaggacatgtaagggttaatgcgtccgtgagcacggtaggtgcggcgcctctgctt 474
||| ||||||||||||||| |||||||| ||||||||||| || ||||||||||||||
Sbjct: 502 ggggttggacatgtaagggttgatgcgtccatgagcacggtacgtccggcgcctctgctt 443
Query: 475 ctgggcttggttcacctggatgtgtgaaacatagaggttgtccacgtccaagcctttcac 534
|||||||||||||||||||||||||||| ||||||||||| || ||||||||||| ||
Sbjct: 442 ttgggcttggttcacctggatgtgtgaaatgtagaggttgtcgacatccaagcctttaac 383
Query: 535 atcagcgttactctcagcattcttcagcaaatccaatatgaacctggctgacttaacagg 594
|||||||||||||||||||||||||||||||||| | |||| ||| ||||| ||||
Sbjct: 382 ttcagcgttactctcagcattcttcagcaaatccagcacgaactgggccgactttgcagg 323
Query: 595 ccagcgaccctgcccattggagtggcgagactttgcttgtgcggtgcgaccaacacctcc 654
|||||||||||||||||| | ||||| |||| ||||||| || || || |||||||
Sbjct: 322 ccagcgaccctgcccatttggctggcggttctttacttgtgcagtacggcccacacctct 263
Query: 655 acagtatctccggaagggaattgcctgcttgtgagcaataacatcctcaaggtatcgctt 714
|||||||| |||||||||||||| ||||||||||| | ||||||||||||||| | |||
Sbjct: 262 gcagtatctacggaagggaattgcttgcttgtgagcgagaacatcctcaaggtacctctt 203
Query: 715 agccttggtcaaaggcagcttgcgaagcgcaaaagctgtctcccttgtgttcttgaagtg 774
||||||| |||||||| | ||||||| || ||||||||||| | |||||||||||||||
Sbjct: 202 agccttgcccaaaggcatcctgcgaagagcgaaagctgtctcgcgtgtgttcttgaagtg 143
Query: 775 gaccctcaggtcccttcc-catggccttggccgatttggtagggttgcccggctcctgcg 833
|||||| || ||| | || ||| ||||||||||| ||||| |||||| ||| ||| ||
Sbjct: 142 gaccctgagatccttgccacat-gccttggccgacttggtcgggttggacggatccctcg 84
Query: 834 agtacttaaccatagcggcggcg 856
||||||| ||||| |||||||||
Sbjct: 83 agtacttcaccatggcggcggcg 61
>gb|CA031011.1|CA031011 HX08M06r HX Hordeum vulgare subsp. vulgare cDNA clone HX08M06
5-PRIME, mRNA sequence
Length = 638
Score = 450 bits (227), Expect = e-125
Identities = 436/503 (86%), Gaps = 2/503 (0%)
Strand = Plus / Minus
Query: 355 gttgtcagcctctttcttcacaggctcttccttctctgacagaatcagctcaatgtggca 414
|||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 553 gttgtcagcctccttcttcacaggctcttccttctctgacaagatcagctcaatgtggca 494
Query: 415 aggggaggacatgtaagggttaatgcgtccgtgagcacggtaggtgcggcgcctctgctt 474
||| ||||||||||||||| |||||||| ||||||||||| || ||||||||||||||
Sbjct: 493 ggggttggacatgtaagggttgatgcgtccatgagcacggtacgtccggcgcctctgctt 434
Query: 475 ctgggcttggttcacctggatgtgtgaaacatagaggttgtccacgtccaagcctttcac 534
|||||||||||||||||||||||||||| ||||||||||| || ||||||||||| ||
Sbjct: 433 ttgggcttggttcacctggatgtgtgaaatgtagaggttgtcgacatccaagcctttaac 374
Query: 535 atcagcgttactctcagcattcttcagcaaatccaatatgaacctggctgacttaacagg 594
|||||||||||||||||||||||||||||||||| | |||| ||| ||||| ||||
Sbjct: 373 ttcagcgttactctcagcattcttcagcaaatccagcacgaactgggccgactttgcagg 314
Query: 595 ccagcgaccctgcccattggagtggcgagactttgcttgtgcggtgcgaccaacacctcc 654
|||||||||||||||||| | ||||| |||| ||||||| || || || |||||||
Sbjct: 313 ccagcgaccctgcccatttggctggcggttctttacttgtgcagtacggcccacacctct 254
Query: 655 acagtatctccggaagggaattgcctgcttgtgagcaataacatcctcaaggtatcgctt 714
|||||||| |||||||||||||| ||||||||||| | ||||||||||||||| | |||
Sbjct: 253 gcagtatctacggaagggaattgcttgcttgtgagcgagaacatcctcaaggtacctctt 194
Query: 715 agccttggtcaaaggcagcttgcgaagcgcaaaagctgtctcccttgtgttcttgaagtg 774
||||||| |||||||| | ||||||| || ||||||||||| | |||||||||||||||
Sbjct: 193 agccttgcccaaaggcatcctgcgaagagcgaaagctgtctcgcgtgtgttcttgaagtg 134
Query: 775 gaccctcaggtcccttcc-catggccttggccgatttggtagggttgcccggctcctgcg 833
|||||| || ||| | || ||| ||||||||||| ||||| |||||| ||| ||| ||
Sbjct: 133 gaccctgagatccttgccacat-gccttggccgacttggtcgggttggacggatccctcg 75
Query: 834 agtacttaaccatagcggcggcg 856
||||||| ||||| |||||||||
Sbjct: 74 agtacttcaccatggcggcggcg 52
>gb|CA031516.1|CA031516 HX10D15r HX Hordeum vulgare subsp. vulgare cDNA clone HX10D15
5-PRIME, mRNA sequence
Length = 613
Score = 450 bits (227), Expect = e-125
Identities = 436/503 (86%), Gaps = 2/503 (0%)
Strand = Plus / Minus
Query: 355 gttgtcagcctctttcttcacaggctcttccttctctgacagaatcagctcaatgtggca 414
|||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 526 gttgtcagcctccttcttcacaggctcttccttctctgacaagatcagctcaatgtggca 467
Query: 415 aggggaggacatgtaagggttaatgcgtccgtgagcacggtaggtgcggcgcctctgctt 474
||| ||||||||||||||| |||||||| ||||||||||| || ||||||||||||||
Sbjct: 466 ggggttggacatgtaagggttgatgcgtccatgagcacggtacgtccggcgcctctgctt 407
Query: 475 ctgggcttggttcacctggatgtgtgaaacatagaggttgtccacgtccaagcctttcac 534
|||||||||||||||||||||||||||| ||||||||||| || ||||||||||| ||
Sbjct: 406 ttgggcttggttcacctggatgtgtgaaatgtagaggttgtcgacatccaagcctttaac 347
Query: 535 atcagcgttactctcagcattcttcagcaaatccaatatgaacctggctgacttaacagg 594
|||||||||||||||||||||||||||||||||| | |||| ||| ||||| ||||
Sbjct: 346 ttcagcgttactctcagcattcttcagcaaatccagcacgaactgggccgactttgcagg 287
Query: 595 ccagcgaccctgcccattggagtggcgagactttgcttgtgcggtgcgaccaacacctcc 654
|||||||||||||||||| | ||||| |||| ||||||| || || || |||||||
Sbjct: 286 ccagcgaccctgcccatttggctggcggttctttacttgtgcagtacggcccacacctct 227
Query: 655 acagtatctccggaagggaattgcctgcttgtgagcaataacatcctcaaggtatcgctt 714
|||||||| |||||||||||||| ||||||||||| | ||||||||||||||| | |||
Sbjct: 226 gcagtatctacggaagggaattgcttgcttgtgagcgagaacatcctcaaggtacctctt 167
Query: 715 agccttggtcaaaggcagcttgcgaagcgcaaaagctgtctcccttgtgttcttgaagtg 774
||||||| |||||||| | ||||||| || ||||||||||| | |||||||||||||||
Sbjct: 166 agccttgcccaaaggcatcctgcgaagagcgaaagctgtctcgcgtgtgttcttgaagtg 107
Query: 775 gaccctcaggtcccttcc-catggccttggccgatttggtagggttgcccggctcctgcg 833
|||||| || ||| | || ||| ||||||||||| ||||| |||||| ||| ||| ||
Sbjct: 106 gaccctgagatccttgccacat-gccttggccgacttggtcgggttggacggatccctcg 48
Query: 834 agtacttaaccatagcggcggcg 856
||||||| ||||| |||||||||
Sbjct: 47 agtacttcaccatggcggcggcg 25
>gb|CA031697.1|CA031697 HX10N24r HX Hordeum vulgare subsp. vulgare cDNA clone HX10N24
5-PRIME, mRNA sequence
Length = 638
Score = 450 bits (227), Expect = e-125
Identities = 436/503 (86%), Gaps = 2/503 (0%)
Strand = Plus / Minus
Query: 355 gttgtcagcctctttcttcacaggctcttccttctctgacagaatcagctcaatgtggca 414
|||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 562 gttgtcagcctccttcttcacaggctcttccttctctgacaagatcagctcaatgtggca 503
Query: 415 aggggaggacatgtaagggttaatgcgtccgtgagcacggtaggtgcggcgcctctgctt 474
||| ||||||||||||||| |||||||| ||||||||||| || ||||||||||||||
Sbjct: 502 ggggttggacatgtaagggttgatgcgtccatgagcacggtacgtccggcgcctctgctt 443
Query: 475 ctgggcttggttcacctggatgtgtgaaacatagaggttgtccacgtccaagcctttcac 534
|||||||||||||||||||||||||||| ||||||||||| || ||||||||||| ||
Sbjct: 442 ttgggcttggttcacctggatgtgtgaaatgtagaggttgtcgacatccaagcctttaac 383
Query: 535 atcagcgttactctcagcattcttcagcaaatccaatatgaacctggctgacttaacagg 594
|||||||||||||||||||||||||||||||||| | |||| ||| ||||| ||||
Sbjct: 382 ttcagcgttactctcagcattcttcagcaaatccagcacgaactgggccgactttgcagg 323
Query: 595 ccagcgaccctgcccattggagtggcgagactttgcttgtgcggtgcgaccaacacctcc 654
|||||||||||||||||| | ||||| |||| ||||||| || || || |||||||
Sbjct: 322 ccagcgaccctgcccatttggctggcggttctttacttgtgcagtacggcccacacctct 263
Query: 655 acagtatctccggaagggaattgcctgcttgtgagcaataacatcctcaaggtatcgctt 714
|||||||| |||||||||||||| ||||||||||| | ||||||||||||||| | |||
Sbjct: 262 gcagtatctacggaagggaattgcttgcttgtgagcgagaacatcctcaaggtacctctt 203
Query: 715 agccttggtcaaaggcagcttgcgaagcgcaaaagctgtctcccttgtgttcttgaagtg 774
||||||| |||||||| | ||||||| || ||||||||||| | |||||||||||||||
Sbjct: 202 agccttgcccaaaggcatcctgcgaagagcgaaagctgtctcgcgtgtgttcttgaagtg 143
Query: 775 gaccctcaggtcccttcc-catggccttggccgatttggtagggttgcccggctcctgcg 833
|||||| || ||| | || ||| ||||||||||| ||||| |||||| ||| ||| ||
Sbjct: 142 gaccctgagatccttgccacat-gccttggccgacttggtcgggttggacggatccctcg 84
Query: 834 agtacttaaccatagcggcggcg 856
||||||| ||||| |||||||||
Sbjct: 83 agtacttcaccatggcggcggcg 61
>gb|CA032437.1|CA032437 HX13A17r HX Hordeum vulgare subsp. vulgare cDNA clone HX13A17
5-PRIME, mRNA sequence
Length = 599
Score = 450 bits (227), Expect = e-125
Identities = 436/503 (86%), Gaps = 2/503 (0%)
Strand = Plus / Minus
Query: 355 gttgtcagcctctttcttcacaggctcttccttctctgacagaatcagctcaatgtggca 414
|||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 526 gttgtcagcctccttcttcacaggctcttccttctctgacaagatcagctcaatgtggca 467
Query: 415 aggggaggacatgtaagggttaatgcgtccgtgagcacggtaggtgcggcgcctctgctt 474
||| ||||||||||||||| |||||||| ||||||||||| || ||||||||||||||
Sbjct: 466 ggggttggacatgtaagggttgatgcgtccatgagcacggtacgtccggcgcctctgctt 407
Query: 475 ctgggcttggttcacctggatgtgtgaaacatagaggttgtccacgtccaagcctttcac 534
|||||||||||||||||||||||||||| ||||||||||| || ||||||||||| ||
Sbjct: 406 ttgggcttggttcacctggatgtgtgaaatgtagaggttgtcgacatccaagcctttaac 347
Query: 535 atcagcgttactctcagcattcttcagcaaatccaatatgaacctggctgacttaacagg 594
|||||||||||||||||||||||||||||||||| | |||| ||| ||||| ||||
Sbjct: 346 ttcagcgttactctcagcattcttcagcaaatccagcacgaactgggccgactttgcagg 287
Query: 595 ccagcgaccctgcccattggagtggcgagactttgcttgtgcggtgcgaccaacacctcc 654
|||||||||||||||||| | ||||| |||| ||||||| || || || |||||||
Sbjct: 286 ccagcgaccctgcccatttggctggcggttctttacttgtgcagtacggcccacacctct 227
Query: 655 acagtatctccggaagggaattgcctgcttgtgagcaataacatcctcaaggtatcgctt 714
|||||||| |||||||||||||| ||||||||||| | ||||||||||||||| | |||
Sbjct: 226 gcagtatctacggaagggaattgcttgcttgtgagcgagaacatcctcaaggtacctctt 167
Query: 715 agccttggtcaaaggcagcttgcgaagcgcaaaagctgtctcccttgtgttcttgaagtg 774
||||||| |||||||| | ||||||| || ||||||||||| | |||||||||||||||
Sbjct: 166 agccttgcccaaaggcatcctgcgaagagcgaaagctgtctcgcgtgtgttcttgaagtg 107
Query: 775 gaccctcaggtcccttcc-catggccttggccgatttggtagggttgcccggctcctgcg 833
|||||| || ||| | || ||| ||||||||||| ||||| |||||| ||| ||| ||
Sbjct: 106 gaccctgagatccttgccacat-gccttggccgacttggtcgggttggacggatccctcg 48
Query: 834 agtacttaaccatagcggcggcg 856
||||||| ||||| |||||||||
Sbjct: 47 agtacttcaccatggcggcggcg 25
>emb|X62725.1|HVRNPL172 H.vulgare mRNA for ribosomal protein L17-2
Length = 854
Score = 450 bits (227), Expect = e-125
Identities = 436/503 (86%), Gaps = 2/503 (0%)
Strand = Plus / Minus
Query: 355 gttgtcagcctctttcttcacaggctcttccttctctgacagaatcagctcaatgtggca 414
|||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 534 gttgtcagcctccttcttcacaggctcttccttctctgacaagatcagctcaatgtggca 475
Query: 415 aggggaggacatgtaagggttaatgcgtccgtgagcacggtaggtgcggcgcctctgctt 474
||| ||||||||||||||| |||||||| ||||||||||| || ||||||||||||||
Sbjct: 474 ggggttggacatgtaagggttgatgcgtccatgagcacggtacgtccggcgcctctgctt 415
Query: 475 ctgggcttggttcacctggatgtgtgaaacatagaggttgtccacgtccaagcctttcac 534
|||||||||||||||||||||||||||| ||||||||||| || ||||||||||| ||
Sbjct: 414 ttgggcttggttcacctggatgtgtgaaatgtagaggttgtcgacatccaagcctttaac 355
Query: 535 atcagcgttactctcagcattcttcagcaaatccaatatgaacctggctgacttaacagg 594
|||||||||||||||||||||||||||||||||| | |||| ||| ||||| ||||
Sbjct: 354 ttcagcgttactctcagcattcttcagcaaatccagcacgaactgggccgactttgcagg 295
Query: 595 ccagcgaccctgcccattggagtggcgagactttgcttgtgcggtgcgaccaacacctcc 654
|||||||||||||||||| | ||||| |||| ||||||| || || || |||||||
Sbjct: 294 ccagcgaccctgcccatttggctggcggttctttacttgtgcagtacggcccacacctct 235
Query: 655 acagtatctccggaagggaattgcctgcttgtgagcaataacatcctcaaggtatcgctt 714
|||||||| |||||||||||||| ||||||||||| | ||||||||||||||| | |||
Sbjct: 234 gcagtatctacggaagggaattgcttgcttgtgagcgagaacatcctcaaggtacctctt 175
Query: 715 agccttggtcaaaggcagcttgcgaagcgcaaaagctgtctcccttgtgttcttgaagtg 774
||||||| |||||||| | ||||||| || ||||||||||| | |||||||||||||||
Sbjct: 174 agccttgcccaaaggcatcctgcgaagagcgaaagctgtctcgcgtgtgttcttgaagtg 115
Query: 775 gaccctcaggtcccttcc-catggccttggccgatttggtagggttgcccggctcctgcg 833
|||||| || ||| | || ||| ||||||||||| ||||| |||||| ||| ||| ||
Sbjct: 114 gaccctgagatccttgccacat-gccttggccgacttggtcgggttggacggatccctcg 56
Query: 834 agtacttaaccatagcggcggcg 856
||||||| ||||| |||||||||
Sbjct: 55 agtacttcaccatggcggcggcg 33
>gb|BF627340.3|BF627340 HVSMEb0004J16f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0004J16f, mRNA sequence
Length = 864
Score = 444 bits (224), Expect = e-123
Identities = 435/503 (86%), Gaps = 2/503 (0%)
Strand = Plus / Minus
Query: 355 gttgtcagcctctttcttcacaggctcttccttctctgacagaatcagctcaatgtggca 414
||||||||| || |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 541 gttgtcagcntccttcttcacaggctcttccttctctgacaagatcagctcaatgtggca 482
Query: 415 aggggaggacatgtaagggttaatgcgtccgtgagcacggtaggtgcggcgcctctgctt 474
||| ||||||||||||||| |||||||| ||||||||||| || ||||||||||||||
Sbjct: 481 ggggttggacatgtaagggttgatgcgtccatgagcacggtacgtccggcgcctctgctt 422
Query: 475 ctgggcttggttcacctggatgtgtgaaacatagaggttgtccacgtccaagcctttcac 534
|||||||||||||||||||||||||||| ||||||||||| || ||||||||||| ||
Sbjct: 421 ttgggcttggttcacctggatgtgtgaaatgtagaggttgtcgacatccaagcctttaac 362
Query: 535 atcagcgttactctcagcattcttcagcaaatccaatatgaacctggctgacttaacagg 594
|||||||||||||||||||||||||||||||||| | |||| ||| ||||| ||||
Sbjct: 361 ttcagcgttactctcagcattcttcagcaaatccagcacgaactgggccgactttgcagg 302
Query: 595 ccagcgaccctgcccattggagtggcgagactttgcttgtgcggtgcgaccaacacctcc 654
|||||||||||||||||| | ||||| |||| ||||||| || || || |||||||
Sbjct: 301 ccagcgaccctgcccatttggctggcggttctttacttgtgcagtacggcccacacctct 242
Query: 655 acagtatctccggaagggaattgcctgcttgtgagcaataacatcctcaaggtatcgctt 714
|||||||| |||||||||||||| ||||||||||| | ||||||||||||||| | |||
Sbjct: 241 gcagtatctacggaagggaattgcttgcttgtgagcgagaacatcctcaaggtacctctt 182
Query: 715 agccttggtcaaaggcagcttgcgaagcgcaaaagctgtctcccttgtgttcttgaagtg 774
||||||| |||||||| | ||||||| || ||||||||||| | |||||||||||||||
Sbjct: 181 agccttgcccaaaggcatcctgcgaagagcgaaagctgtctcgcgtgtgttcttgaagtg 122
Query: 775 gaccctcaggtcccttcc-catggccttggccgatttggtagggttgcccggctcctgcg 833
|||||| || ||| | || ||| ||||||||||| ||||| |||||| ||| ||| ||
Sbjct: 121 gaccctgagatccttgccacat-gccttggccgacttggtcgggttggacggatccctcg 63
Query: 834 agtacttaaccatagcggcggcg 856
||||||| ||||| |||||||||
Sbjct: 62 agtacttcaccatggcggcggcg 40
>gb|BQ763528.1|BQ763528 EBro02_SQ008_O14_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ008_O14 5', mRNA sequence
Length = 521
Score = 436 bits (220), Expect = e-121
Identities = 423/488 (86%), Gaps = 2/488 (0%)
Strand = Plus / Minus
Query: 370 cttcacaggctcttccttctctgacagaatcagctcaatgtggcaaggggaggacatgta 429
|||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||
Sbjct: 521 cttcacaggctcttccttctctgacaagatcagctcaatgtggcaggggttggacatgta 462
Query: 430 agggttaatgcgtccgtgagcacggtaggtgcggcgcctctgcttctgggcttggttcac 489
|||||| |||||||| ||||||||||| || |||||||||||||| ||||||||||||||
Sbjct: 461 agggttgatgcgtccatgagcacggtacgtccggcgcctctgcttttgggcttggttcac 402
Query: 490 ctggatgtgtgaaacatagaggttgtccacgtccaagcctttcacatcagcgttactctc 549
|||||||||||||| ||||||||||| || ||||||||||| || ||||||||||||||
Sbjct: 401 ctggatgtgtgaaatgtagaggttgtcgacatccaagcctttaacttcagcgttactctc 342
Query: 550 agcattcttcagcaaatccaatatgaacctggctgacttaacaggccagcgaccctgccc 609
|||||||||||||||||||| | |||| ||| ||||| |||||||||||||||||||
Sbjct: 341 agcattcttcagcaaatccagcacgaactgggccgactttgcaggccagcgaccctgccc 282
Query: 610 attggagtggcgagactttgcttgtgcggtgcgaccaacacctccacagtatctccggaa 669
||| | ||||| |||| ||||||| || || || ||||||| |||||||| |||||
Sbjct: 281 atttggctggcggttctttacttgtgcagtacggcccacacctctgcagtatctacggaa 222
Query: 670 gggaattgcctgcttgtgagcaataacatcctcaaggtatcgcttagccttggtcaaagg 729
||||||||| ||||||||||| | ||||||||||||||| | |||||||||| ||||||
Sbjct: 221 gggaattgcttgcttgtgagcgagaacatcctcaaggtacctcttagccttgcccaaagg 162
Query: 730 cagcttgcgaagcgcaaaagctgtctcccttgtgttcttgaagtggaccctcaggtccct 789
|| ||||||||| || ||||||||||| | ||||||||||||||||||||| || ||| |
Sbjct: 161 catcttgcgaagagcgaaagctgtctcgcgtgtgttcttgaagtggaccctgagatcctt 102
Query: 790 tcc-catggccttggccgatttggtagggttgcccggctcctgcgagtacttaaccatag 848
|| ||| ||||||||||| ||||| |||||| ||| ||| ||||||||| ||||| |
Sbjct: 101 gccacat-gccttggccgacttggtcgggttggacggatccctcgagtacttcaccatgg 43
Query: 849 cggcggcg 856
||||||||
Sbjct: 42 cggcggcg 35
>gb|BE196427.2|BE196427 HVSMEh0092E08f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0092E08f, mRNA sequence
Length = 954
Score = 434 bits (219), Expect = e-120
Identities = 434/503 (86%), Gaps = 2/503 (0%)
Strand = Plus / Minus
Query: 355 gttgtcagcctctttcttcacaggctcttccttctctgacagaatcagctcaatgtggca 414
|||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 553 gttgtcagcctccttcttcacaggctcttccttctttgacaagatcagctcaatgtggca 494
Query: 415 aggggaggacatgtaagggttaatgcgtccgtgagcacggtaggtgcggcgcctctgctt 474
||| | ||||||||||||| |||||||| ||||||||||| || ||||||||||||||
Sbjct: 493 ggggttgcacatgtaagggttgatgcgtccatgagcacggtacgtccggcgcctctgctt 434
Query: 475 ctgggcttggttcacctggatgtgtgaaacatagaggttgtccacgtccaagcctttcac 534
|||||||||||||||||||||||||||| ||||||||||| || ||||||||||| ||
Sbjct: 433 ttgggcttggttcacctggatgtgtgaaatgtagaggttgtcgacatccaagcctttaac 374
Query: 535 atcagcgttactctcagcattcttcagcaaatccaatatgaacctggctgacttaacagg 594
|||||||||||||||||||||||||||||||||| | |||| ||| ||||| ||||
Sbjct: 373 ttcagcgttactctcagcattcttcagcaaatccagcacgaactgggccgactttgcagg 314
Query: 595 ccagcgaccctgcccattggagtggcgagactttgcttgtgcggtgcgaccaacacctcc 654
|||||||||||||||||| | ||||| |||| ||||||| || || || |||||||
Sbjct: 313 ccagcgaccctgcccatttggctggcggttctttacttgtgcagtacggcccacacctct 254
Query: 655 acagtatctccggaagggaattgcctgcttgtgagcaataacatcctcaaggtatcgctt 714
|||||||| |||||||||||||| ||||||||||| | ||||||||||||||| | |||
Sbjct: 253 gcagtatctacggaagggaattgcttgcttgtgagcgagaacatcctcaaggtacctctt 194
Query: 715 agccttggtcaaaggcagcttgcgaagcgcaaaagctgtctcccttgtgttcttgaagtg 774
||||||| |||||||| | ||||||| || ||||||||||| | |||||||||||||||
Sbjct: 193 agccttgcccaaaggcatcctgcgaagagcgaaagctgtctcgcgtgtgttcttgaagtg 134
Query: 775 gaccctcaggtcccttcc-catggccttggccgatttggtagggttgcccggctcctgcg 833
|||||| || ||| | || ||| ||||||||||| ||||| |||||| ||| ||| ||
Sbjct: 133 gaccctgagatccttgccacat-gccttggccgacttggtcgggttggacggatccctcg 75
Query: 834 agtacttaaccatagcggcggcg 856
||||||| ||||| |||||||||
Sbjct: 74 agtacttcaccatggcggcggcg 52
>gb|CA024004.1|CA024004 HZ48B13r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ48B13
5-PRIME, mRNA sequence
Length = 534
Score = 434 bits (219), Expect = e-120
Identities = 407/467 (87%), Gaps = 2/467 (0%)
Strand = Plus / Minus
Query: 355 gttgtcagcctctttcttcacaggctcttccttctctgacagaatcagctcaatgtggca 414
|||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 482 gttgtcagcctccttcttcacaggctcttccttctctgacaagatcagctcaatgtggca 423
Query: 415 aggggaggacatgtaagggttaatgcgtccgtgagcacggtaggtgcggcgcctctgctt 474
||| ||||||||||||||| |||||||| ||||||||||| || ||||||||||||||
Sbjct: 422 ggggttggacatgtaagggttgatgcgtccatgagcacggtacgtccggcgcctctgctt 363
Query: 475 ctgggcttggttcacctggatgtgtgaaacatagaggttgtccacgtccaagcctttcac 534
|||||||||||||||||||||||||||| ||||||||||| || ||||||||||| ||
Sbjct: 362 ttgggcttggttcacctggatgtgtgaaatgtagaggttgtcgacatccaagcctttaac 303
Query: 535 atcagcgttactctcagcattcttcagcaaatccaatatgaacctggctgacttaacagg 594
|||||||||||||||||||||||||||||||||| | |||| ||| ||||| ||||
Sbjct: 302 ttcagcgttactctcagcattcttcagcaaatccagcacgaactgggccgactttgcagg 243
Query: 595 ccagcgaccctgcccattggagtggcgagactttgcttgtgcggtgcgaccaacacctcc 654
|||||||||||||||||| | ||||| |||| ||||||| || || || |||||||
Sbjct: 242 ccagcgaccctgcccatttggctggcggttctttacttgtgcagtacggcccacacctct 183
Query: 655 acagtatctccggaagggaattgcctgcttgtgagcaataacatcctcaaggtatcgctt 714
|||||||| |||||||||||||| ||||||||||| | ||||||||||||||| | |||
Sbjct: 182 gcagtatctacggaagggaattgcttgcttgtgagcgagaacatcctcaaggtacctctt 123
Query: 715 agccttggtcaaaggcagcttgcgaagcgcaaaagctgtctcccttgtgttcttgaagtg 774
||||||| |||||||| | ||||||| || ||||||||||| | |||||||||||||||
Sbjct: 122 agccttgcccaaaggcatcctgcgaagagcgaaagctgtctcgcgtgtgttcttgaagtg 63
Query: 775 gaccctcaggtcccttcc-catggccttggccgatttggtagggttg 820
|||||| || ||| | || ||| ||||||||||| ||||| ||||||
Sbjct: 62 gaccctgagatccttgccacat-gccttggccgacttggtcgggttg 17
>gb|CV056944.1|CV056944 BNEL22d1 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL22d1 5' similar to 60S RIBOSOMAL
PROTEIN L17-2, mRNA sequence
Length = 557
Score = 434 bits (219), Expect = e-120
Identities = 434/503 (86%), Gaps = 2/503 (0%)
Strand = Plus / Minus
Query: 355 gttgtcagcctctttcttcacaggctcttccttctctgacagaatcagctcaatgtggca 414
|||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 545 gttgtcagcctccttcttcacaggctcttccttctctgacaagatcagctcaatgtggca 486
Query: 415 aggggaggacatgtaagggttaatgcgtccgtgagcacggtaggtgcggcgcctctgctt 474
||| ||||||||||||||| |||||||| ||||||||||| || ||||||||||||||
Sbjct: 485 ggggttggacatgtaagggttgatgcgtccatgagcacggtacgtccggcgcctctgctt 426
Query: 475 ctgggcttggttcacctggatgtgtgaaacatagaggttgtccacgtccaagcctttcac 534
|||||||||||||||||||||||||||| ||||||||||| || ||||||||||| ||
Sbjct: 425 ttgggcttggttcacctggatgtgtgaaatgtagaggttgtcgacatccaagcctttaac 366
Query: 535 atcagcgttactctcagcattcttcagcaaatccaatatgaacctggctgacttaacagg 594
|||||||||||||||||||||||||||||||||| | |||| ||| ||||| ||||
Sbjct: 365 ttcagcgttactctcagcattcttcagcaaatccagcacgaactgggccgactttgcagg 306
Query: 595 ccagcgaccctgcccattggagtggcgagactttgcttgtgcggtgcgaccaacacctcc 654
|||||||||||||||||| | ||||| |||| ||||||| || || || |||||||
Sbjct: 305 ccagcgaccctgcccatttggctggcggttctttacttgtgcagtacggcccacacctct 246
Query: 655 acagtatctccggaagggaattgcctgcttgtgagcaataacatcctcaaggtatcgctt 714
|||||||| |||||||||||||| ||||||||||| | ||||||||||||||| | |||
Sbjct: 245 gcagtatctacggaagggaattgcttgcttgtgagcgagaacatcctcaaggtacctctt 186
Query: 715 agccttggtcaaaggcagcttgcgaagcgcaaaagctgtctcccttgtgttcttgaagtg 774
||||||| |||||||| | ||||||| || || |||||||| | |||||||||||||||
Sbjct: 185 agccttgcccaaaggcatcctgcgaagagcgaacgctgtctcgcgtgtgttcttgaagtg 126
Query: 775 gaccctcaggtcccttcc-catggccttggccgatttggtagggttgcccggctcctgcg 833
|||||| || ||| | || ||| ||||||||||| ||||| |||||| || ||| ||
Sbjct: 125 gaccctgagatccttgccacat-gccttggccgacttggtcgggttggatggatccctcg 67
Query: 834 agtacttaaccatagcggcggcg 856
||||||| ||||| |||||||||
Sbjct: 66 agtacttcaccatggcggcggcg 44
>gb|CV063871.1|CV063871 BNEL94b11 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL94b11 5' similar to 60S RIBOSOMAL
PROTEIN L17-2, mRNA sequence
Length = 654
Score = 434 bits (219), Expect = e-120
Identities = 434/503 (86%), Gaps = 2/503 (0%)
Strand = Plus / Minus
Query: 355 gttgtcagcctctttcttcacaggctcttccttctctgacagaatcagctcaatgtggca 414
|||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 578 gttgtcagcctccttcttcacaggctcttccttctctgacaagatcagctcaatgtggca 519
Query: 415 aggggaggacatgtaagggttaatgcgtccgtgagcacggtaggtgcggcgcctctgctt 474
||| ||||||||||||||| |||||||| ||||||||||| || ||||||||||||||
Sbjct: 518 ggggttggacatgtaagggttgatgcgtccatgagcacggtacgtccggcgcctctgctt 459
Query: 475 ctgggcttggttcacctggatgtgtgaaacatagaggttgtccacgtccaagcctttcac 534
|||||||||||||||||||||||||||| ||||||||||| || ||||||||||| ||
Sbjct: 458 ttgggcttggttcacctggatgtgtgaaatgtagaggttgtcgacatccaagcctttaac 399
Query: 535 atcagcgttactctcagcattcttcagcaaatccaatatgaacctggctgacttaacagg 594
|||||||||||||||||||||||||||||||||| | |||| ||| ||||| ||||
Sbjct: 398 ttcagcgttactctcagcattcttcagcaaatccagcacgaactgggccgactttgcagg 339
Query: 595 ccagcgaccctgcccattggagtggcgagactttgcttgtgcggtgcgaccaacacctcc 654
|||||||||||||||||| | ||||| |||| ||||||| || || || |||||||
Sbjct: 338 ccagcgaccctgcccatttggctggcggttctttacttgtgcagtacggcccacacctct 279
Query: 655 acagtatctccggaagggaattgcctgcttgtgagcaataacatcctcaaggtatcgctt 714
|||||||| |||||||||||||| ||||||||||| | ||||||||||||||| | |||
Sbjct: 278 gcagtatctacggaagggaattgcttgcttgtgagcgagaacatcctcaaggtacctctt 219
Query: 715 agccttggtcaaaggcagcttgcgaagcgcaaaagctgtctcccttgtgttcttgaagtg 774
||||||| |||||||| | ||||||| || || |||||||| | |||||||||||||||
Sbjct: 218 agccttgcccaaaggcatcctgcgaagagcgaacgctgtctcgcgtgtgttcttgaagtg 159
Query: 775 gaccctcaggtcccttcc-catggccttggccgatttggtagggttgcccggctcctgcg 833
|||||| || ||| | || ||| ||||||||||| ||||| |||||| || ||| ||
Sbjct: 158 gaccctgagatccttgccacat-gccttggccgacttggtcgggttggatggatccctcg 100
Query: 834 agtacttaaccatagcggcggcg 856
||||||| ||||| |||||||||
Sbjct: 99 agtacttcaccatggcggcggcg 77
>gb|AW982608.1|AW982608 HVSMEg0003L18f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0003L18f, mRNA sequence
Length = 573
Score = 426 bits (215), Expect = e-118
Identities = 433/503 (86%), Gaps = 2/503 (0%)
Strand = Plus / Minus
Query: 355 gttgtcagcctctttcttcacaggctcttccttctctgacagaatcagctcaatgtggca 414
||||||||| || ||||||||||| |||||||||||||||| |||||||||||||||||
Sbjct: 558 gttgtcagcttccttcttcacaggttcttccttctctgacaagatcagctcaatgtggca 499
Query: 415 aggggaggacatgtaagggttaatgcgtccgtgagcacggtaggtgcggcgcctctgctt 474
||| ||||||||||||||| |||||||| ||||||||||| || ||||||||||||||
Sbjct: 498 ggggttggacatgtaagggttgatgcgtccatgagcacggtacgtccggcgcctctgctt 439
Query: 475 ctgggcttggttcacctggatgtgtgaaacatagaggttgtccacgtccaagcctttcac 534
|||||||||||||||||||||||||||| ||||||||||| || ||||||||||| ||
Sbjct: 438 ttgggcttggttcacctggatgtgtgaaatgtagaggttgtcgacatccaagcctttaac 379
Query: 535 atcagcgttactctcagcattcttcagcaaatccaatatgaacctggctgacttaacagg 594
|||||||||||||||||||| ||||||||||||| | |||| ||| ||||| ||||
Sbjct: 378 ttcagcgttactctcagcatttttcagcaaatccagcacgaactgggccgactttgcagg 319
Query: 595 ccagcgaccctgcccattggagtggcgagactttgcttgtgcggtgcgaccaacacctcc 654
|||||||||||||||||| | ||||| |||| ||||||| || || || |||||||
Sbjct: 318 ccagcgaccctgcccatttggctggcggttctttacttgtgcagtacggcccacacctct 259
Query: 655 acagtatctccggaagggaattgcctgcttgtgagcaataacatcctcaaggtatcgctt 714
|||||||| |||||||||||||| ||||||||||| | ||||||||||||||| | |||
Sbjct: 258 gcagtatctacggaagggaattgcttgcttgtgagcgagaacatcctcaaggtacctctt 199
Query: 715 agccttggtcaaaggcagcttgcgaagcgcaaaagctgtctcccttgtgttcttgaagtg 774
||||||| |||||||| | ||||||| || ||||||||||| | |||||||||||||||
Sbjct: 198 agccttgcccaaaggcatcctgcgaagagcgaaagctgtctcgcgtgtgttcttgaagtg 139
Query: 775 gaccctcaggtcccttcc-catggccttggccgatttggtagggttgcccggctcctgcg 833
|||||| || ||| | || ||| ||||||||||| ||||| |||||| ||| ||| ||
Sbjct: 138 gaccctgagatccttgccacat-gccttggccgacttggtcgggttggacggatccctcg 80
Query: 834 agtacttaaccatagcggcggcg 856
||||||| ||||| |||||||||
Sbjct: 79 agtacttcaccatggcggcggcg 57
>gb|BQ767736.1|BQ767736 EBro08_SQ009_O18_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ009_O18 5', mRNA sequence
Length = 543
Score = 426 bits (215), Expect = e-118
Identities = 421/487 (86%), Gaps = 2/487 (0%)
Strand = Plus / Minus
Query: 371 ttcacaggctcttccttctctgacagaatcagctcaatgtggcaaggggaggacatgtaa 430
||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||
Sbjct: 543 ttcacaggctcttccttctctgacaagatcagctcaatgtggcaggggttggacatgtaa 484
Query: 431 gggttaatgcgtccgtgagcacggtaggtgcggcgcctctgcttctgggcttggttcacc 490
||||| |||||||| ||||||||||| || |||||||||||||| |||||||||||||||
Sbjct: 483 gggttgatgcgtccatgagcacggtacgtccggcgcctctgcttttgggcttggttcacc 424
Query: 491 tggatgtgtgaaacatagaggttgtccacgtccaagcctttcacatcagcgttactctca 550
||||||||||||| ||||||||||| || ||||||||||| || |||||||||||||||
Sbjct: 423 tggatgtgtgaaatgtagaggttgtcgacatccaagcctttaacttcagcgttactctca 364
Query: 551 gcattcttcagcaaatccaatatgaacctggctgacttaacaggccagcgaccctgccca 610
||||||||||||||||||| | |||| ||| ||||| ||||||||||||||||||||
Sbjct: 363 gcattcttcagcaaatccagcacgaactgggccgactttgcaggccagcgaccctgccca 304
Query: 611 ttggagtggcgagactttgcttgtgcggtgcgaccaacacctccacagtatctccggaag 670
|| | ||||| |||| ||||||| || || || ||||||| |||||||| ||||||
Sbjct: 303 tttggctggcggttctttacttgtgcagtacggcccacacctctgcagtatctacggaag 244
Query: 671 ggaattgcctgcttgtgagcaataacatcctcaaggtatcgcttagccttggtcaaaggc 730
|||||||| ||||||||||| | ||||||||||||||| | |||||||||| |||||||
Sbjct: 243 ggaattgcttgcttgtgagcgagaacatcctcaaggtacctcttagccttgcccaaaggc 184
Query: 731 agcttgcgaagcgcaaaagctgtctcccttgtgttcttgaagtggaccctcaggtccctt 790
| | ||||||| || ||||||||||| | ||||||||||||||||||||| || ||| |
Sbjct: 183 atcctgcgaagagcgaaagctgtctcgcgtgtgttcttgaagtggaccctgagatccttg 124
Query: 791 cc-catggccttggccgatttggtagggttgcccggctcctgcgagtacttaaccatagc 849
|| ||| ||||||||||| ||||| |||||| ||| ||| ||||||||| ||||| ||
Sbjct: 123 ccacat-gccttggccgacttggtcgggttggacggatccctcgagtacttcaccatggc 65
Query: 850 ggcggcg 856
|||||||
Sbjct: 64 ggcggcg 58
>gb|CV059505.1|CV059505 BNEL48h11 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL48h11 5' similar to 60S RIBOSOMAL
PROTEIN L17-2, mRNA sequence
Length = 600
Score = 426 bits (215), Expect = e-118
Identities = 433/503 (86%), Gaps = 2/503 (0%)
Strand = Plus / Minus
Query: 355 gttgtcagcctctttcttcacaggctcttccttctctgacagaatcagctcaatgtggca 414
|||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 553 gttgtcagcctccttcttcacaggctcttccttctctgacaagatcagctcaatgtggca 494
Query: 415 aggggaggacatgtaagggttaatgcgtccgtgagcacggtaggtgcggcgcctctgctt 474
||| ||||||||||||||| |||||||| ||||||||||| || ||||||||||||||
Sbjct: 493 ggggttggacatgtaagggttgatgcgtccatgagcacggtacgtccggcgcctctgctt 434
Query: 475 ctgggcttggttcacctggatgtgtgaaacatagaggttgtccacgtccaagcctttcac 534
|||||||||||||||||||||||||||| ||||||||||| || ||| ||||||| ||
Sbjct: 433 ttgggcttggttcacctggatgtgtgaaatgtagaggttgtcgacatcccagcctttaac 374
Query: 535 atcagcgttactctcagcattcttcagcaaatccaatatgaacctggctgacttaacagg 594
|||||||||||||||||||||||||||||||||| | |||| ||| ||||| ||||
Sbjct: 373 ttcagcgttactctcagcattcttcagcaaatccagcacgaactgggccgactttgcagg 314
Query: 595 ccagcgaccctgcccattggagtggcgagactttgcttgtgcggtgcgaccaacacctcc 654
|||||||||||||||||| | ||||| |||| ||||||| || || || |||||||
Sbjct: 313 ccagcgaccctgcccatttggctggcggttctttacttgtgcagtacggcccacacctct 254
Query: 655 acagtatctccggaagggaattgcctgcttgtgagcaataacatcctcaaggtatcgctt 714
|||||||| |||||||||||||| ||||||||||| | ||||||||||||||| | |||
Sbjct: 253 gcagtatctacggaagggaattgcttgcttgtgagcgagaacatcctcaaggtacctctt 194
Query: 715 agccttggtcaaaggcagcttgcgaagcgcaaaagctgtctcccttgtgttcttgaagtg 774
||||||| |||||||| | ||||||| || || |||||||| | |||||||||||||||
Sbjct: 193 agccttgcccaaaggcatcctgcgaagagcgaacgctgtctcgcgtgtgttcttgaagtg 134
Query: 775 gaccctcaggtcccttcc-catggccttggccgatttggtagggttgcccggctcctgcg 833
|||||| || ||| | || ||| ||||||||||| ||||| |||||| || ||| ||
Sbjct: 133 gaccctgagatccttgccacat-gccttggccgacttggtcgggttggatggatccctcg 75
Query: 834 agtacttaaccatagcggcggcg 856
||||||| ||||| |||||||||
Sbjct: 74 agtacttcaccatggcggcggcg 52
>gb|BQ763037.1|BQ763037 EBro02_SQ006_P22 _R root, 3 week, hydroponic grown, low nitrogen,
cv Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA
clone EBro02_SQ006_P22 5', mRNA sequence
Length = 653
Score = 422 bits (213), Expect = e-117
Identities = 431/501 (86%), Gaps = 2/501 (0%)
Strand = Plus / Minus
Query: 355 gttgtcagcctctttcttcacaggctcttccttctctgacagaatcagctcaatgtggca 414
|||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 552 gttgtcagcctccttcttcacaggctcttccttctctgacaagatcagctcaatgtggca 493
Query: 415 aggggaggacatgtaagggttaatgcgtccgtgagcacggtaggtgcggcgcctctgctt 474
||| ||||||||||||||| |||||||| ||||||||||| || ||||||||||||||
Sbjct: 492 ggggttggacatgtaagggttgatgcgtccatgagcacggtacgtccggcgcctctgctt 433
Query: 475 ctgggcttggttcacctggatgtgtgaaacatagaggttgtccacgtccaagcctttcac 534
|||||||||||||||||||||||||||| ||||||||||| || ||||||||||| ||
Sbjct: 432 ttgggcttggttcacctggatgtgtgaaatgtagaggttgtcgacatccaagcctttaac 373
Query: 535 atcagcgttactctcagcattcttcagcaaatccaatatgaacctggctgacttaacagg 594
|||||||||||||||||||||||||||||||||| | |||| ||| ||||| ||||
Sbjct: 372 ttcagcgttactctcagcattcttcagcaaatccagcacgaactgggccgactttgcagg 313
Query: 595 ccagcgaccctgcccattggagtggcgagactttgcttgtgcggtgcgaccaacacctcc 654
|||||||||||||||||| | ||||| |||| ||||||| || || || |||||||
Sbjct: 312 ccagcgaccctgcccatttggctggcggttctttacttgtgcagtacggcccacacctct 253
Query: 655 acagtatctccggaagggaattgcctgcttgtgagcaataacatcctcaaggtatcgctt 714
|||||||| |||||||||||||| ||||||||||| | |||||| |||||||| ||
Sbjct: 252 gcagtatctacggaagggaattgcttgcttgtgagcgagaacatcatcaaggtacatatt 193
Query: 715 agccttggtcaaaggcagcttgcgaagcgcaaaagctgtctcccttgtgttcttgaagtg 774
||||||| |||||||| | ||||||| || ||||||||||| | |||||||||||||||
Sbjct: 192 agccttgcccaaaggcatcctgcgaagagcgaaagctgtctcgcgtgtgttcttgaagtg 133
Query: 775 gaccctcaggtcccttcc-catggccttggccgatttggtagggttgcccggctcctgcg 833
|||||| || ||| | || ||| ||||||||||| ||||| |||||| ||| ||| ||
Sbjct: 132 gaccctgagatccttgccacat-gccttggccgacttggtcgggttggacggatccctcg 74
Query: 834 agtacttaaccatagcggcgg 854
||||||| ||||| |||||||
Sbjct: 73 agtacttcaccatggcggcgg 53
>gb|CV060707.1|CV060707 BNEL60c2 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL60c2 5' similar to ribosomal
protein L17, mRNA sequence
Length = 596
Score = 420 bits (212), Expect = e-116
Identities = 434/504 (86%), Gaps = 3/504 (0%)
Strand = Plus / Minus
Query: 355 gttgtcagcctctttcttcacaggctcttccttctctgacagaatcagctcaatgtggca 414
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 554 gttgtcagcctctttcttcacaggctcttccttctctgacaagatcagctcaatgtggca 495
Query: 415 aggggaggacatgtaagggttaatgcgtccgtgagcacggtaggtgcggcgcctctgctt 474
||| ||||||||||||||| |||||||| ||||||||||| || ||||||||||||||
Sbjct: 494 ggggttggacatgtaagggttgatgcgtccatgagcacggtacgtccggcgcctctgctt 435
Query: 475 ctgggcttggttcacctggatgtgtgaaacatagaggttgtccacgtccaagcctttcac 534
|||||||||||||||||||||||||||| ||||||||||| || ||||||||||| ||
Sbjct: 434 ttgggcttggttcacctggatgtgtgaaatgtagaggttgtcgacatccaagcctttaac 375
Query: 535 atcagcgttactctcagcattcttcagcaaa-tccaatatgaacctggctgacttaacag 593
|||||||||||||||||||||||||||||| |||| |||| ||| ||||| |||
Sbjct: 374 ttcagcgttactctcagcattcttcagcaaaatccagccggaactgggccgactttgcag 315
Query: 594 gccagcgaccctgcccattggagtggcgagactttgcttgtgcggtgcgaccaacacctc 653
||||||||||||||||||| | ||||| |||| ||||||| || || || |||||||
Sbjct: 314 gccagcgaccctgcccatttggctggcggttctttacttgtgcagtacggcccacacctc 255
Query: 654 cacagtatctccggaagggaattgcctgcttgtgagcaataacatcctcaaggtatcgct 713
|||||||| |||||||||||||| ||||||||||| | ||||||||||||||| | ||
Sbjct: 254 tgcagtatctacggaagggaattgcttgcttgtgagcgagaacatcctcaaggtacctct 195
Query: 714 tagccttggtcaaaggcagcttgcgaagcgcaaaagctgtctcccttgtgttcttgaagt 773
|||||||| |||||||| | ||||||| || || |||||||| | ||||||||||||||
Sbjct: 194 tagccttgcccaaaggcatcctgcgaagagcgaacgctgtctcgcgtgtgttcttgaagt 135
Query: 774 ggaccctcaggtcccttcc-catggccttggccgatttggtagggttgcccggctcctgc 832
||||||| || ||| | || ||| ||||||||||| ||||| |||||| || ||| |
Sbjct: 134 ggaccctgagatccttgccacat-gccttggccgacttggtcgggttggatggatccctc 76
Query: 833 gagtacttaaccatagcggcggcg 856
|||||||| ||||| |||||||||
Sbjct: 75 gagtacttcaccatggcggcggcg 52
>gb|CB875588.1|CB875588 HX08M06w HX Hordeum vulgare subsp. vulgare cDNA clone HX08M06
3-PRIME, mRNA sequence
Length = 628
Score = 418 bits (211), Expect = e-115
Identities = 367/419 (87%)
Strand = Plus / Plus
Query: 355 gttgtcagcctctttcttcacaggctcttccttctctgacagaatcagctcaatgtggca 414
|||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 210 gttgtcagcctccttcttcacaggctcttccttctctgacaagatcagctcaatgtggca 269
Query: 415 aggggaggacatgtaagggttaatgcgtccgtgagcacggtaggtgcggcgcctctgctt 474
||| ||||||||||||||| |||||||| ||||||||||| || ||||||||||||||
Sbjct: 270 ggggttggacatgtaagggttgatgcgtccatgagcacggtacgtccggcgcctctgctt 329
Query: 475 ctgggcttggttcacctggatgtgtgaaacatagaggttgtccacgtccaagcctttcac 534
|||||||||||||||||||||||||||| ||||||||||| || ||||||||||| ||
Sbjct: 330 ttgggcttggttcacctggatgtgtgaaatgtagaggttgtcgacatccaagcctttaac 389
Query: 535 atcagcgttactctcagcattcttcagcaaatccaatatgaacctggctgacttaacagg 594
|||||||||||||||||||||||||||||||||| | |||| ||| ||||| ||||
Sbjct: 390 ttcagcgttactctcagcattcttcagcaaatccagcacgaactgggccgactttgcagg 449
Query: 595 ccagcgaccctgcccattggagtggcgagactttgcttgtgcggtgcgaccaacacctcc 654
|||||||||||||||||| | ||||| |||| ||||||| || || || |||||||
Sbjct: 450 ccagcgaccctgcccatttggctggcggttctttacttgtgcagtacggcccacacctct 509
Query: 655 acagtatctccggaagggaattgcctgcttgtgagcaataacatcctcaaggtatcgctt 714
|||||||| |||||||||||||| ||||||||||| | ||||||||||||||| | |||
Sbjct: 510 gcagtatctacggaagggaattgcttgcttgtgagcgagaacatcctcaaggtacctctt 569
Query: 715 agccttggtcaaaggcagcttgcgaagcgcaaaagctgtctcccttgtgttcttgaagt 773
||||||| |||||||| | ||||||| || ||||||||||| | ||||||||||||||
Sbjct: 570 agccttgcccaaaggcatcctgcgaagagcgaaagctgtctcgcgtgtgttcttgaagt 628
>gb|BQ459187.1|BQ459187 HA02A19r HA Hordeum vulgare subsp. vulgare cDNA clone HA02A19
5-PRIME, mRNA sequence
Length = 520
Score = 389 bits (196), Expect = e-106
Identities = 396/460 (86%), Gaps = 2/460 (0%)
Strand = Plus / Minus
Query: 398 atcagctcaatgtggcaaggggaggacatgtaagggttaatgcgtccgtgagcacggtag 457
||||||||||||||||| ||| ||||||||||||||| |||||||| |||||||||||
Sbjct: 520 atcagctcaatgtggcaggggttggacatgtaagggttgatgcgtccatgagcacggtac 461
Query: 458 gtgcggcgcctctgcttctgggcttggttcacctggatgtgtgaaacatagaggttgtcc 517
|| |||||||||||||| |||||||||||||||||||||||||||| |||||||||||
Sbjct: 460 gtccggcgcctctgcttttgggcttggttcacctggatgtgtgaaatgtagaggttgtcg 401
Query: 518 acgtccaagcctttcacatcagcgttactctcagcattcttcagcaaatccaatatgaac 577
|| ||||||||||| || |||||||||||||||||||||||||||||||||| | ||||
Sbjct: 400 acatccaagcctttaacttcagcgttactctcagcattcttcagcaaatccagcacgaac 341
Query: 578 ctggctgacttaacaggccagcgaccctgcccattggagtggcgagactttgcttgtgcg 637
||| ||||| |||||||||||||||||||||| | ||||| |||| |||||||
Sbjct: 340 tgggccgactttgcaggccagcgaccctgcccatttggctggcggttctttacttgtgca 281
Query: 638 gtgcgaccaacacctccacagtatctccggaagggaattgcctgcttgtgagcaataaca 697
|| || || ||||||| |||||||| |||||||||||||| ||||||||||| | ||||
Sbjct: 280 gtacggcccacacctctgcagtatctacggaagggaattgcttgcttgtgagcgagaaca 221
Query: 698 tcctcaaggtatcgcttagccttggtcaaaggcagcttgcgaagcgcaaaagctgtctcc 757
||||||||||| | |||||||||| |||||||| | ||||||| || |||||||||||
Sbjct: 220 tcctcaaggtacctcttagccttgcccaaaggcatcctgcgaagagcgaaagctgtctcg 161
Query: 758 cttgtgttcttgaagtggaccctcaggtcccttcc-catggccttggccgatttggtagg 816
| ||||||||||||||||||||| || ||| | || ||| ||||||||||| ||||| ||
Sbjct: 160 cgtgtgttcttgaagtggaccctgagatccttgccacat-gccttggccgacttggtcgg 102
Query: 817 gttgcccggctcctgcgagtacttaaccatagcggcggcg 856
|||| ||| ||| ||||||||| ||||| |||||||||
Sbjct: 101 gttggacggatccctcgagtacttcaccatggcggcggcg 62
>gb|BM374418.2|BM374418 EBpi03_SQ003_J04_R pistil, 4 DPA, no treatment, cv Optic, EBpi03
Hordeum vulgare subsp. vulgare cDNA clone
EBpi03_SQ003_J04 5', mRNA sequence
Length = 516
Score = 389 bits (196), Expect = e-106
Identities = 396/460 (86%), Gaps = 2/460 (0%)
Strand = Plus / Minus
Query: 398 atcagctcaatgtggcaaggggaggacatgtaagggttaatgcgtccgtgagcacggtag 457
||||||||||||||||| ||| ||||||||||||||| |||||||| |||||||||||
Sbjct: 510 atcagctcaatgtggcaggggttggacatgtaagggttgatgcgtccatgagcacggtac 451
Query: 458 gtgcggcgcctctgcttctgggcttggttcacctggatgtgtgaaacatagaggttgtcc 517
|| |||||||||||||| |||||||||||||||||||||||||||| |||||||||||
Sbjct: 450 gtccggcgcctctgcttttgggcttggttcacctggatgtgtgaaatgtagaggttgtcg 391
Query: 518 acgtccaagcctttcacatcagcgttactctcagcattcttcagcaaatccaatatgaac 577
|| ||||||||||| || |||||||||||||||||||||||||||||||||| | ||||
Sbjct: 390 acatccaagcctttaacttcagcgttactctcagcattcttcagcaaatccagcacgaac 331
Query: 578 ctggctgacttaacaggccagcgaccctgcccattggagtggcgagactttgcttgtgcg 637
||| ||||| |||||||||||||||||||||| | ||||| |||| |||||||
Sbjct: 330 tgggccgactttgcaggccagcgaccctgcccatttggctggcggttctttacttgtgca 271
Query: 638 gtgcgaccaacacctccacagtatctccggaagggaattgcctgcttgtgagcaataaca 697
|| || || ||||||| |||||||| |||||||||||||| ||||||||||| | ||||
Sbjct: 270 gtacggcccacacctctgcagtatctacggaagggaattgcttgcttgtgagcgagaaca 211
Query: 698 tcctcaaggtatcgcttagccttggtcaaaggcagcttgcgaagcgcaaaagctgtctcc 757
||||||||||| | |||||||||| |||||||| | ||||||| || |||||||||||
Sbjct: 210 tcctcaaggtacctcttagccttgcccaaaggcatcctgcgaagagcgaaagctgtctcg 151
Query: 758 cttgtgttcttgaagtggaccctcaggtcccttcc-catggccttggccgatttggtagg 816
| ||||||||||||||||||||| || ||| | || ||| ||||||||||| ||||| ||
Sbjct: 150 cgtgtgttcttgaagtggaccctgagatccttgccacat-gccttggccgacttggtcgg 92
Query: 817 gttgcccggctcctgcgagtacttaaccatagcggcggcg 856
|||| ||| ||| ||||||||| ||||| |||||||||
Sbjct: 91 gttggacggatccctcgagtacttcaccatggcggcggcg 52
>gb|BU982299.1|BU982299 HA26B17r HA Hordeum vulgare subsp. vulgare cDNA clone HA26B17
5-PRIME, mRNA sequence
Length = 520
Score = 389 bits (196), Expect = e-106
Identities = 396/460 (86%), Gaps = 2/460 (0%)
Strand = Plus / Minus
Query: 398 atcagctcaatgtggcaaggggaggacatgtaagggttaatgcgtccgtgagcacggtag 457
||||||||||||||||| ||| ||||||||||||||| |||||||| |||||||||||
Sbjct: 518 atcagctcaatgtggcaggggttggacatgtaagggttgatgcgtccatgagcacggtac 459
Query: 458 gtgcggcgcctctgcttctgggcttggttcacctggatgtgtgaaacatagaggttgtcc 517
|| |||||||||||||| |||||||||||||||||||||||||||| |||||||||||
Sbjct: 458 gtccggcgcctctgcttttgggcttggttcacctggatgtgtgaaatgtagaggttgtcg 399
Query: 518 acgtccaagcctttcacatcagcgttactctcagcattcttcagcaaatccaatatgaac 577
|| ||||||||||| || |||||||||||||||||||||||||||||||||| | ||||
Sbjct: 398 acatccaagcctttaacttcagcgttactctcagcattcttcagcaaatccagcacgaac 339
Query: 578 ctggctgacttaacaggccagcgaccctgcccattggagtggcgagactttgcttgtgcg 637
||| ||||| |||||||||||||||||||||| | ||||| |||| |||||||
Sbjct: 338 tgggccgactttgcaggccagcgaccctgcccatttggctggcggttctttacttgtgca 279
Query: 638 gtgcgaccaacacctccacagtatctccggaagggaattgcctgcttgtgagcaataaca 697
|| || || ||||||| |||||||| |||||||||||||| ||||||||||| | ||||
Sbjct: 278 gtacggcccacacctctgcagtatctacggaagggaattgcttgcttgtgagcgagaaca 219
Query: 698 tcctcaaggtatcgcttagccttggtcaaaggcagcttgcgaagcgcaaaagctgtctcc 757
||||||||||| | |||||||||| |||||||| | ||||||| || |||||||||||
Sbjct: 218 tcctcaaggtacctcttagccttgcccaaaggcatcctgcgaagagcgaaagctgtctcg 159
Query: 758 cttgtgttcttgaagtggaccctcaggtcccttcc-catggccttggccgatttggtagg 816
| ||||||||||||||||||||| || ||| | || ||| ||||||||||| ||||| ||
Sbjct: 158 cgtgtgttcttgaagtggaccctgagatccttgccacat-gccttggccgacttggtcgg 100
Query: 817 gttgcccggctcctgcgagtacttaaccatagcggcggcg 856
|||| ||| ||| ||||||||| ||||| |||||||||
Sbjct: 99 gttggacggatccctcgagtacttcaccatggcggcggcg 60
>gb|BF624958.1|BF624958 HVSMEa0005E18f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0005E18f, mRNA sequence
Length = 882
Score = 387 bits (195), Expect = e-106
Identities = 428/503 (85%), Gaps = 2/503 (0%)
Strand = Plus / Minus
Query: 355 gttgtcagcctctttcttcacaggctcttccttctctgacagaatcagctcaatgtggca 414
||||||||| || || |||||||||||||| |||||||||| |||||||||||||||||
Sbjct: 545 gttgtcagcgtcgttattcacaggctcttctttctctgacaagatcagctcaatgtggca 486
Query: 415 aggggaggacatgtaagggttaatgcgtccgtgagcacggtaggtgcggcgcctctgctt 474
||| | ||||||||||||||||| |||| ||||||||||| || ||||||||||||||
Sbjct: 485 ggggtggtacatgtaagggttaatgagtccatgagcacggtacgtccggcgcctctgctt 426
Query: 475 ctgggcttggttcacctggatgtgtgaaacatagaggttgtccacgtccaagcctttcac 534
||||||||||||||||||||||||| || |||||||||| || ||||||||||| ||
Sbjct: 425 ttgggcttggttcacctggatgtgtgtaatgtagaggttgttgacatccaagcctttaac 366
Query: 535 atcagcgttactctcagcattcttcagcaaatccaatatgaacctggctgacttaacagg 594
|||||||||||||||||||| ||||||||||||| | |||| ||| ||||| ||||
Sbjct: 365 ttcagcgttactctcagcattgttcagcaaatccagcacgaactgggccgactttgcagg 306
Query: 595 ccagcgaccctgcccattggagtggcgagactttgcttgtgcggtgcgaccaacacctcc 654
|||||||||||||||||| | ||||| |||| ||||||| || || || |||||||
Sbjct: 305 ccagcgaccctgcccatttggctggcggttctttacttgtgcagtacggcccacacctct 246
Query: 655 acagtatctccggaagggaattgcctgcttgtgagcaataacatcctcaaggtatcgctt 714
|||||||| |||||||||||||| ||||||||||| | ||||||||||||||| | ||
Sbjct: 245 gcagtatctacggaagggaattgcttgcttgtgagcgagaacatcctcaaggtacctgtt 186
Query: 715 agccttggtcaaaggcagcttgcgaagcgcaaaagctgtctcccttgtgttcttgaagtg 774
||||||| |||||||| | ||||||| || ||||||||||| | |||||||||||||||
Sbjct: 185 agccttgcccaaaggcatcctgcgaagagcgaaagctgtctcgcgtgtgttcttgaagtg 126
Query: 775 gaccctcaggtcccttcc-catggccttggccgatttggtagggttgcccggctcctgcg 833
|||||| || ||| | || ||| ||||||||||| ||||| |||||| ||| ||| ||
Sbjct: 125 gaccctgagatccttgccacat-gccttggccgacttggtcgggttggacggatccctcg 67
Query: 834 agtacttaaccatagcggcggcg 856
||||||| ||||| |||||||||
Sbjct: 66 agtacttcaccatggcggcggcg 44
>gb|AJ460715.1|AJ460715 AJ460715 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200072A03F1, mRNA sequence
Length = 540
Score = 387 bits (195), Expect = e-106
Identities = 339/387 (87%)
Strand = Plus / Minus
Query: 355 gttgtcagcctctttcttcacaggctcttccttctctgacagaatcagctcaatgtggca 414
|||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 391 gttgtcagcctccttcttcacaggctcttccttctctgacaagatcagctcaatgtggca 332
Query: 415 aggggaggacatgtaagggttaatgcgtccgtgagcacggtaggtgcggcgcctctgctt 474
||| ||||||||||||||| |||||||| ||||||||||| || ||||||||||||||
Sbjct: 331 ggggttggacatgtaagggttgatgcgtccatgagcacggtacgtccggcgcctctgctt 272
Query: 475 ctgggcttggttcacctggatgtgtgaaacatagaggttgtccacgtccaagcctttcac 534
|||||||||||||||||||||||||||| ||||||||||| || ||||||||||| ||
Sbjct: 271 ttgggcttggttcacctggatgtgtgaaatgtagaggttgtcgacatccaagcctttaac 212
Query: 535 atcagcgttactctcagcattcttcagcaaatccaatatgaacctggctgacttaacagg 594
|||||||||||||||||||||||||||||||||| | |||| ||| ||||| ||||
Sbjct: 211 ttcagcgttactctcagcattcttcagcaaatccagcacgaactgggccgactttgcagg 152
Query: 595 ccagcgaccctgcccattggagtggcgagactttgcttgtgcggtgcgaccaacacctcc 654
|||||||||||||||||| | ||||| |||| ||||||| || || || |||||||
Sbjct: 151 ccagcgaccctgcccatttggctggcggttctttacttgtgcagtacggcccacacctct 92
Query: 655 acagtatctccggaagggaattgcctgcttgtgagcaataacatcctcaaggtatcgctt 714
|||||||| |||||||||||||| ||||||||||| | ||||||||||||||| | |||
Sbjct: 91 gcagtatctacggaagggaattgcttgcttgtgagcgagaacatcctcaaggtacctctt 32
Query: 715 agccttggtcaaaggcagcttgcgaag 741
||||||| |||||||| | |||||||
Sbjct: 31 agccttgcccaaaggcatcctgcgaag 5
>gb|BF630001.3|BF630001 HVSMEb0007J18f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0007J18f, mRNA sequence
Length = 497
Score = 355 bits (179), Expect = 2e-096
Identities = 372/434 (85%), Gaps = 2/434 (0%)
Strand = Plus / Minus
Query: 421 ggacatgtaagggttaatgcgtccgtgagcacggtaggtgcggcgcctctgcttctgggc 480
||||||||||||||| |||||||| ||||||||||| || |||||||||||||| |||||
Sbjct: 485 ggacatgtaagggttgatgcgtccatgagcacggtacgtccggcgcctctgcttttgggc 426
Query: 481 ttggttcacctggatgtgtgaaacatagaggttgtccacgtccaagcctttcacatcagc 540
||||||||||||||||||||||| ||||||| ||| || ||||||||||| || |||||
Sbjct: 425 ttggttcacctggatgtgtgaaatgtagaggtngtcgacatccaagcctttaacttcagc 366
Query: 541 gttactctcagcattcttcagcaaatccaatatgaacctggctgacttaacaggccagcg 600
||||||||||||||||||||||||||||| | |||| ||| ||||| ||||||||||
Sbjct: 365 gttactctcagcattcttcagcaaatccagcacgaactgggccgactttgcaggccagcg 306
Query: 601 accctgcccattggagtggcgagactttgcttgtgcggtgcgaccaacacctccacagta 660
|||||||||||| | ||||| |||| ||||||| || || || ||||||| |||||
Sbjct: 305 accctgcccatttggctggcggttctttacttgtgcagtacggcccacacctctgcagta 246
Query: 661 tctccggaagggaattgcctgcttgtgagcaataacatcctcaaggtatcgcttagcctt 720
||| |||||||||||||| ||||||||||| | ||||||||||||||| | |||||||||
Sbjct: 245 tctacggaagggaattgcttgcttgtgagcgagaacatcctcaaggtacctcttagcctt 186
Query: 721 ggtcaaaggcagcttgcgaagcgcaaaagctgtctcccttgtgttcttgaagtggaccct 780
| |||||||| | ||||||| || ||||||||||| | |||||||||||||||||||||
Sbjct: 185 gcccaaaggcatcctgcgaagagcgaaagctgtctcgcgtgtgttcttgaagtggaccct 126
Query: 781 caggtcccttcc-catggccttggccgatttggtagggttgcccggctcctgcgagtact 839
|| ||| | || ||| ||||||||||| ||||| |||||| ||| ||| ||||||||
Sbjct: 125 gagatccttgccacat-gccttggccgacttggtcgggttggacggatccctcgagtact 67
Query: 840 taaccatagcggcg 853
| ||||| ||||||
Sbjct: 66 tcaccatggcggcg 53
>gb|AV921091.1|AV921091 AV921091 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags16o20 3', mRNA sequence
Length = 714
Score = 349 bits (176), Expect = 1e-094
Identities = 296/336 (88%)
Strand = Plus / Plus
Query: 355 gttgtcagcctctttcttcacaggctcttccttctctgacagaatcagctcaatgtggca 414
|||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 371 gttgtcagcctccttcttcacaggctcttccttctctgacaagatcagctcaatgtggca 430
Query: 415 aggggaggacatgtaagggttaatgcgtccgtgagcacggtaggtgcggcgcctctgctt 474
||| ||||||||||||||| |||||||| ||||||||||| || ||||||||||||||
Sbjct: 431 ggggttggacatgtaagggttgatgcgtccatgagcacggtacgtccggcgcctctgctt 490
Query: 475 ctgggcttggttcacctggatgtgtgaaacatagaggttgtccacgtccaagcctttcac 534
|||||||||||||||||||||||||||| ||||||||||| || ||||||||||| ||
Sbjct: 491 ttgggcttggttcacctggatgtgtgaaatgtagaggttgtcgacatccaagcctttaac 550
Query: 535 atcagcgttactctcagcattcttcagcaaatccaatatgaacctggctgacttaacagg 594
|||||||||||||||||||||||||||||||||| | |||| ||| ||||| ||||
Sbjct: 551 ttcagcgttactctcagcattcttcagcaaatccagcacgaactgggccgactttgcagg 610
Query: 595 ccagcgaccctgcccattggagtggcgagactttgcttgtgcggtgcgaccaacacctcc 654
|||||||||||||||||| | ||||| |||| ||||||| || || || |||||||
Sbjct: 611 ccagcgaccctgcccatttggctggcggttctttacttgtgcagtacggcccacacctct 670
Query: 655 acagtatctccggaagggaattgcctgcttgtgagc 690
|||||||| |||||||||||||| |||||||||||
Sbjct: 671 gcagtatctacggaagggaattgcttgcttgtgagc 706
>gb|BU966967.1|BU966967 HB02O16r BC Hordeum vulgare subsp. vulgare cDNA clone HB02O16
5-PRIME, mRNA sequence
Length = 513
Score = 345 bits (174), Expect = 2e-093
Identities = 365/426 (85%), Gaps = 2/426 (0%)
Strand = Plus / Minus
Query: 432 ggttaatgcgtccgtgagcacggtaggtgcggcgcctctgcttctgggcttggttcacct 491
|||| |||||||| ||||||||||| || |||||||||||||| ||||||||||||||||
Sbjct: 513 ggttgatgcgtccatgagcacggtacgtccggcgcctctgcttttgggcttggttcacct 454
Query: 492 ggatgtgtgaaacatagaggttgtccacgtccaagcctttcacatcagcgttactctcag 551
|||||||||||| ||||||||||| || ||||||||||| || ||||||||||||||||
Sbjct: 453 ggatgtgtgaaatgtagaggttgtcgacatccaagcctttaacttcagcgttactctcag 394
Query: 552 cattcttcagcaaatccaatatgaacctggctgacttaacaggccagcgaccctgcccat 611
|||||||||||||||||| | |||| ||| ||||| |||||||||||||||||||||
Sbjct: 393 cattcttcagcaaatccagcacgaactgggccgactttgcaggccagcgaccctgcccat 334
Query: 612 tggagtggcgagactttgcttgtgcggtgcgaccaacacctccacagtatctccggaagg 671
| | ||||| |||| ||||||| || || || ||||||| |||||||| |||||||
Sbjct: 333 ttggctggcggttctttacttgtgcagtacggcccacacctctgcagtatctacggaagg 274
Query: 672 gaattgcctgcttgtgagcaataacatcctcaaggtatcgcttagccttggtcaaaggca 731
||||||| ||||||||||| | ||||||||||||||| | |||||||||| ||||||||
Sbjct: 273 gaattgcttgcttgtgagcgagaacatcctcaaggtacctcttagccttgcccaaaggca 214
Query: 732 gcttgcgaagcgcaaaagctgtctcccttgtgttcttgaagtggaccctcaggtcccttc 791
| ||||||| || ||||||||||| | ||||||||||||||||||||| || ||| | |
Sbjct: 213 tcctgcgaagagcgaaagctgtctcgcgtgtgttcttgaagtggaccctgagatccttgc 154
Query: 792 c-catggccttggccgatttggtagggttgcccggctcctgcgagtacttaaccatagcg 850
| ||| ||||||||||| ||||| |||||| ||| ||| ||||||||| ||||| |||
Sbjct: 153 cacat-gccttggccgacttggtcgggttggacggatccctcgagtacttcaccatggcg 95
Query: 851 gcggcg 856
||||||
Sbjct: 94 gcggcg 89
>gb|CB876048.1|CB876048 HX10C01w HX Hordeum vulgare subsp. vulgare cDNA clone HX10C01
3-PRIME, mRNA sequence
Length = 592
Score = 313 bits (158), Expect = 6e-084
Identities = 233/258 (90%)
Strand = Plus / Plus
Query: 355 gttgtcagcctctttcttcacaggctcttccttctctgacagaatcagctcaatgtggca 414
|||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 306 gttgtcagcctccttcttcacaggctcttccttctctgacaagatcagctcaatgtggca 365
Query: 415 aggggaggacatgtaagggttaatgcgtccgtgagcacggtaggtgcggcgcctctgctt 474
||| ||||||||||||||| |||||||| ||||||||||| || ||||||||||||||
Sbjct: 366 ggggttggacatgtaagggttgatgcgtccatgagcacggtacgtccggcgcctctgctt 425
Query: 475 ctgggcttggttcacctggatgtgtgaaacatagaggttgtccacgtccaagcctttcac 534
|||||||||||||||||||||||||||| ||||||||||| || ||||||||||| ||
Sbjct: 426 ttgggcttggttcacctggatgtgtgaaatgtagaggttgtcgacatccaagcctttaac 485
Query: 535 atcagcgttactctcagcattcttcagcaaatccaatatgaacctggctgacttaacagg 594
|||||||||||||||||||||||||||||||||| | |||| ||| ||||| ||||
Sbjct: 486 ttcagcgttactctcagcattcttcagcaaatccagcacgaactgggccgactttgcagg 545
Query: 595 ccagcgaccctgcccatt 612
||||||||||||||||||
Sbjct: 546 ccagcgaccctgcccatt 563
>gb|CB876266.1|CB876266 HX10M10w HX Hordeum vulgare subsp. vulgare cDNA clone HX10M10
3-PRIME, mRNA sequence
Length = 618
Score = 313 bits (158), Expect = 6e-084
Identities = 233/258 (90%)
Strand = Plus / Plus
Query: 355 gttgtcagcctctttcttcacaggctcttccttctctgacagaatcagctcaatgtggca 414
|||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 306 gttgtcagcctccttcttcacaggctcttccttctctgacaagatcagctcaatgtggca 365
Query: 415 aggggaggacatgtaagggttaatgcgtccgtgagcacggtaggtgcggcgcctctgctt 474
||| ||||||||||||||| |||||||| ||||||||||| || ||||||||||||||
Sbjct: 366 ggggttggacatgtaagggttgatgcgtccatgagcacggtacgtccggcgcctctgctt 425
Query: 475 ctgggcttggttcacctggatgtgtgaaacatagaggttgtccacgtccaagcctttcac 534
|||||||||||||||||||||||||||| ||||||||||| || ||||||||||| ||
Sbjct: 426 ttgggcttggttcacctggatgtgtgaaatgtagaggttgtcgacatccaagcctttaac 485
Query: 535 atcagcgttactctcagcattcttcagcaaatccaatatgaacctggctgacttaacagg 594
|||||||||||||||||||||||||||||||||| | |||| ||| ||||| ||||
Sbjct: 486 ttcagcgttactctcagcattcttcagcaaatccagcacgaactgggccgactttgcagg 545
Query: 595 ccagcgaccctgcccatt 612
||||||||||||||||||
Sbjct: 546 ccagcgaccctgcccatt 563
>gb|CB875182.1|CB875182 HX07I09w HX Hordeum vulgare subsp. vulgare cDNA clone HX07I09
3-PRIME, mRNA sequence
Length = 636
Score = 311 bits (157), Expect = 2e-083
Identities = 232/257 (90%)
Strand = Plus / Plus
Query: 355 gttgtcagcctctttcttcacaggctcttccttctctgacagaatcagctcaatgtggca 414
|||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 333 gttgtcagcctccttcttcacaggctcttccttctctgacaagatcagctcaatgtggca 392
Query: 415 aggggaggacatgtaagggttaatgcgtccgtgagcacggtaggtgcggcgcctctgctt 474
||| ||||||||||||||| |||||||| ||||||||||| || ||||||||||||||
Sbjct: 393 ggggttggacatgtaagggttgatgcgtccatgagcacggtacgtccggcgcctctgctt 452
Query: 475 ctgggcttggttcacctggatgtgtgaaacatagaggttgtccacgtccaagcctttcac 534
|||||||||||||||||||||||||||| ||||||||||| || ||||||||||| ||
Sbjct: 453 ttgggcttggttcacctggatgtgtgaaatgtagaggttgtcgacatccaagcctttaac 512
Query: 535 atcagcgttactctcagcattcttcagcaaatccaatatgaacctggctgacttaacagg 594
|||||||||||||||||||||||||||||||||| | |||| ||| ||||| ||||
Sbjct: 513 ttcagcgttactctcagcattcttcagcaaatccagcacgaactgggccgactttgcagg 572
Query: 595 ccagcgaccctgcccat 611
|||||||||||||||||
Sbjct: 573 ccagcgaccctgcccat 589
>gb|BF617213.2|BF617213 HVSMEc0015A09f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0015A09f, mRNA sequence
Length = 903
Score = 305 bits (154), Expect = 1e-081
Identities = 232/258 (89%)
Strand = Plus / Minus
Query: 355 gttgtcagcctctttcttcacaggctcttccttctctgacagaatcagctcaatgtggca 414
|||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 290 gttgtcagcctccttcttcacaggctcttccttctctgacaagatcagctcaatgtggca 231
Query: 415 aggggaggacatgtaagggttaatgcgtccgtgagcacggtaggtgcggcgcctctgctt 474
||| ||||||||||||||| |||||||| ||||||||||| || ||||||||||||||
Sbjct: 230 ggggttggacatgtaagggttgatgcgtccatgagcacggtacgtccggcgcctctgctt 171
Query: 475 ctgggcttggttcacctggatgtgtgaaacatagaggttgtccacgtccaagcctttcac 534
|||||||||||||||||||||||||||| ||||||||||| || ||||||||||| ||
Sbjct: 170 ttgggcttggttcacctggatgtgtgaaatgtagaggttgtcgacatccaagcctttaac 111
Query: 535 atcagcgttactctcagcattcttcagcaaatccaatatgaacctggctgacttaacagg 594
|||||||||||||||||||||||||||||||||| | |||| ||| ||||| ||||
Sbjct: 110 ttcagcgttactctcagcattcttcagcaaatccagcacgaactgggccgactttgcagg 51
Query: 595 ccagcgaccctgcccatt 612
||||| ||||||||||||
Sbjct: 50 ccagccaccctgcccatt 33
>gb|CA020562.1|CA020562 HZ36K21r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ36K21
5-PRIME, mRNA sequence
Length = 457
Score = 291 bits (147), Expect = 2e-077
Identities = 198/215 (92%)
Strand = Plus / Minus
Query: 355 gttgtcagcctctttcttcacaggctcttccttctctgacagaatcagctcaatgtggca 414
|||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 230 gttgtcagcctccttcttcacaggctcttccttctctgacaagatcagctcaatgtggca 171
Query: 415 aggggaggacatgtaagggttaatgcgtccgtgagcacggtaggtgcggcgcctctgctt 474
||| ||||||||||||||| |||||||| ||||||||||| || ||||||||||||||
Sbjct: 170 ggggttggacatgtaagggttgatgcgtccatgagcacggtacgtccggcgcctctgctt 111
Query: 475 ctgggcttggttcacctggatgtgtgaaacatagaggttgtccacgtccaagcctttcac 534
|||||||||||||||||||||||||||| ||||||||||| || ||||||||||| ||
Sbjct: 110 ttgggcttggttcacctggatgtgtgaaatgtagaggttgtcgacatccaagcctttaac 51
Query: 535 atcagcgttactctcagcattcttcagcaaatcca 569
||||||||||||||||||||||||||||||||||
Sbjct: 50 ttcagcgttactctcagcattcttcagcaaatcca 16
>gb|BM441853.2|BM441853 EBed07_SQ001_L20_R endosperm, 28 DPA, no treatment, cv Optic,
EBed07 Hordeum vulgare subsp. vulgare cDNA clone
EBed07_SQ001_L20 5', mRNA sequence
Length = 441
Score = 287 bits (145), Expect = 3e-076
Identities = 331/389 (85%), Gaps = 3/389 (0%)
Strand = Plus / Minus
Query: 470 tgcttctgggcttggttcacctggatgtgtgaaacatagaggttgtccacgtccaa-gcc 528
||||| |||||||||||||||||||||||||||| ||||||||||| || ||||| |||
Sbjct: 441 tgcttttgggcttggttcacctggatgtgtgaaatgtagaggttgtcgacatccaacgcc 382
Query: 529 tttcacatcagcgttactctcagcattcttcagcaaatccaatatgaacctggctgactt 588
||| || |||||||||||||||||||||||||||||||||| | |||| ||| |||||
Sbjct: 381 tttaacttcagcgttactctcagcattcttcagcaaatccagcacgaactgggccgactt 322
Query: 589 aacaggccagcgaccctgcccattggagtggcgagactttgcttgtgcggtgcgaccaac 648
|||||||||||||||||||||| | ||||| |||| ||||||| || || || ||
Sbjct: 321 tgcaggccagcgaccctgcccatttggctggcggttctttacttgtgcagtacggcccac 262
Query: 649 acctccacagtatctccggaagggaattgcctgcttgtgagcaataacatcctcaaggta 708
||||| |||||||| |||||||||||||| ||||||||||| | |||||||||||||||
Sbjct: 261 acctctgcagtatctacggaagggaattgcttgcttgtgagcgagaacatcctcaaggta 202
Query: 709 tcgcttagccttggtcaaaggcagcttgcgaagcgcaaaagctgtctcccttgtgttctt 768
| |||||||||| |||||||| | ||||||| || ||||||||||| | |||||||||
Sbjct: 201 cctcttagccttgcccaaaggcatcctgcgaagagcgaaagctgtctcgcgtgtgttctt 142
Query: 769 gaagtggaccctcaggtcccttcc-catggccttggccgatttggtagggttgcccggct 827
|||||||||||| || ||| | || ||| ||||||||||| ||||| |||||| ||| |
Sbjct: 141 gaagtggaccctgagatccttgccacat-gccttggccgacttggtcgggttggacggat 83
Query: 828 cctgcgagtacttaaccatagcggcggcg 856
|| ||||||||| ||||| |||||||||
Sbjct: 82 ccctcgagtacttcaccatggcggcggcg 54
>gb|BQ762726.1|BQ762726 EBro02_SQ004_K19 _R root, 3 week, hydroponic grown, low nitrogen,
cv Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA
clone EBro02_SQ004_K19 5', mRNA sequence
Length = 517
Score = 287 bits (145), Expect = 3e-076
Identities = 373/441 (84%), Gaps = 6/441 (1%)
Strand = Plus / Minus
Query: 421 ggacatgtaagggttaatgcgtccgtgagcacggtaggtgcggcgcctctgcttctgggc 480
||||||||||||||| |||||||| ||||||||||| || |||||||||||||| |||||
Sbjct: 506 ggacatgtaagggttgatgcgtccatgagcacggtacgtccggcgcctctgcttttgggc 447
Query: 481 ttggttcacctggatgtgtgaaacatagaggttgtccacgtccaagcctttcacatcagc 540
||||||||||||||||||||||| ||||||||||| || ||||||||||| || |||||
Sbjct: 446 ttggttcacctggatgtgtgaaatgtagaggttgtcgacatccaagcctttaacttcagc 387
Query: 541 gttactctcagcattcttcagcaaatccaatatgaacctggctgacttaacaggccagcg 600
||||||||||||||| ||||||||||||| | |||| ||| ||||| ||||||||||
Sbjct: 386 gttactctcagcattgttcagcaaatccagcacgaactgggccgactttgcaggccagcg 327
Query: 601 accctgcccattggagtggcgagactttgcttgtgcggtgcgaccaacacctccacagta 660
|||||||||||| | ||||| |||| ||||||| || || || |||||| |||||
Sbjct: 326 accctgcccatttggctggcggttctttacttgtgcagtacggcccacacctgtgcagta 267
Query: 661 tctccggaagggaattgcctgcttgtgagcaataacatcctcaaggtatcgcttagcctt 720
||| |||||||||||||| ||||||||||| | ||||||||||||||| | ||||||||
Sbjct: 266 tctacggaagggaattgcttgcttgtgagcgagaacatcctcaaggtacctgttagcctt 207
Query: 721 ggtcaaa-ggcagcttgcgaa-gcgcaaaagc-tgtctc-ccttgtgttcttgaagtgga 776
| |||| |||| | |||||| | || ||||| |||||| | |||||||||||||||||
Sbjct: 206 gcccaaagggcatcctgcgaaggagcgaaagcgtgtctcggcgtgtgttcttgaagtgga 147
Query: 777 ccctcaggtcccttcc-catggccttggccgatttggtagggttgcccggctcctgcgag 835
|||| || ||| | || ||| ||||||||||| ||||| |||||| ||| ||| ||||
Sbjct: 146 ccctgagatccttgccacat-gccttggccgacttggtcgggttggacggatccctcgag 88
Query: 836 tacttaaccatagcggcggcg 856
||||| ||||| |||||||||
Sbjct: 87 tacttcaccatggcggcggcg 67
>gb|BQ756111.1|BQ756111 EBem05_SQ001_M06_R embryo, 14 DPA, no treatment, cv Optic, EBem05
Hordeum vulgare subsp. vulgare cDNA clone
EBem05_SQ001_M06 5', mRNA sequence
Length = 425
Score = 260 bits (131), Expect = 7e-068
Identities = 307/363 (84%), Gaps = 2/363 (0%)
Strand = Plus / Minus
Query: 495 tgtgtgaaacatagaggttgtccacgtccaagcctttcacatcagcgttactctcagcat 554
||||||||| ||||||||||| || ||||||||||| || |||||||||||||||||||
Sbjct: 425 tgtgtgaaatgtagaggttgtcgacatccaagcctttaacttcagcgttactctcagcat 366
Query: 555 tcttcagcaaatccaatatgaacctggctgacttaacaggccagcgaccctgcccattgg 614
||||||||||||||| | |||| ||| ||||| |||||||||||||||||||||| |
Sbjct: 365 tcttcagcaaatccagcacgaactgggccgactttgcaggccagcgaccctgcccatttg 306
Query: 615 agtggcgagactttgcttgtgcggtgcgaccaacacctccacagtatctccggaagggaa 674
||||| |||| ||||||| || || || ||||||| |||||||| ||||||||||
Sbjct: 305 gctggcggttctttacttgtgcagtacggcccacacctctgcagtatctacggaagggaa 246
Query: 675 ttgcctgcttgtgagcaataacatcctcaaggtatcgcttagccttggtcaaaggcagct 734
|||| ||||||||||| | ||||||||||||||| | |||||||||| |||||||| |
Sbjct: 245 ttgcttgcttgtgagcgagaacatcctcaaggtacctcttagccttgcccaaaggcatcc 186
Query: 735 tgcgaagcgcaaaagctgtctcccttgtgttcttgaagtggaccctcaggtcccttcc-c 793
||||||| || ||||||||||| | ||||||||||||||||||||| || ||| | || |
Sbjct: 185 tgcgaagagcgaaagctgtctcgcgtgtgttcttgaagtggaccctgagatccttgccac 126
Query: 794 atggccttggccgatttggtagggttgcccggctcctgcgagtacttaaccatagcggcg 853
|| ||||||||||| ||||| |||||| ||| ||| ||||||||| ||||| ||||||
Sbjct: 125 at-gccttggccgacttggtcgggttggacggatccctcgagtacttcaccatggcggcg 67
Query: 854 gcg 856
|||
Sbjct: 66 gcg 64
>gb|BU996607.1|BU996607 HM14C15r HM Hordeum vulgare subsp. vulgare cDNA clone HM14C15
5-PRIME, mRNA sequence
Length = 461
Score = 256 bits (129), Expect = 1e-066
Identities = 188/208 (90%)
Strand = Plus / Minus
Query: 355 gttgtcagcctctttcttcacaggctcttccttctctgacagaatcagctcaatgtggca 414
||||||||| || |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 257 gttgtcagcatcattcttcacaggctcttccttctctgacaagatcagctcaatgtggca 198
Query: 415 aggggaggacatgtaagggttaatgcgtccgtgagcacggtaggtgcggcgcctctgctt 474
||| ||||||||||||||| |||||||| ||||||||||| || ||||||||||||||
Sbjct: 197 ggggttggacatgtaagggttgatgcgtccatgagcacggtacgtccggcgcctctgctt 138
Query: 475 ctgggcttggttcacctggatgtgtgaaacatagaggttgtccacgtccaagcctttcac 534
|||||||||||||||||||||||||||| ||||||||||| || ||||||||||| ||
Sbjct: 137 ttgggcttggttcacctggatgtgtgaaatgtagaggttgtcgacatccaagcctttaac 78
Query: 535 atcagcgttactctcagcattcttcagc 562
| ||||||||| |||||||||||||||
Sbjct: 77 ttnagcgttactttcagcattcttcagc 50
>gb|BU982387.1|BU982387 HA26G08r HA Hordeum vulgare subsp. vulgare cDNA clone HA26G08
5-PRIME, mRNA sequence
Length = 430
Score = 240 bits (121), Expect = 7e-062
Identities = 285/337 (84%), Gaps = 2/337 (0%)
Strand = Plus / Minus
Query: 521 tccaagcctttcacatcagcgttactctcagcattcttcagcaaatccaatatgaacctg 580
||||||||||| || |||||||||||||||||||||||||||||||||| | |||| |
Sbjct: 426 tccaagcctttaacttcagcgttactctcagcattcttcagcaaatccagcacgaactgg 367
Query: 581 gctgacttaacaggccagcgaccctgcccattggagtggcgagactttgcttgtgcggtg 640
|| ||||| |||||||||||||||||||||| | ||||| |||| ||||||| ||
Sbjct: 366 gccgactttgcaggccagcgaccctgcccatttggctggcggttctttacttgtgcagta 307
Query: 641 cgaccaacacctccacagtatctccggaagggaattgcctgcttgtgagcaataacatcc 700
|| || ||||||| |||||||| |||||||||||||| ||||||||||| | |||||||
Sbjct: 306 cggcccacacctctgcagtatctacggaagggaattgcttgcttgtgagcgagaacatcc 247
Query: 701 tcaaggtatcgcttagccttggtcaaaggcagcttgcgaagcgcaaaagctgtctccctt 760
|||||||| | |||||||||| |||||||| | ||||||| || ||||||||||| | |
Sbjct: 246 tcaaggtacctcttagccttgcccaaaggcatcctgcgaagagcgaaagctgtctcgcgt 187
Query: 761 gtgttcttgaagtggaccctcaggtcccttcc-catggccttggccgatttggtagggtt 819
|||||||||||||||||||| || ||| | || ||| ||||||||||| ||||| |||||
Sbjct: 186 gtgttcttgaagtggaccctgagatccttgccacat-gccttggccgacttggtcgggtt 128
Query: 820 gcccggctcctgcgagtacttaaccatagcggcggcg 856
| ||| ||| ||||||||| ||||| |||||||||
Sbjct: 127 ggacggatccctcgagtacttcaccatggcggcggcg 91
>gb|BM376645.1|BM376645 EBem05_SQ002_N01_R embryo, 14 DPA, no treatment, cv Optic, EBem05
Hordeum vulgare subsp. vulgare cDNA clone
EBem05_SQ002_N01 5', mRNA sequence
Length = 416
Score = 226 bits (114), Expect = 1e-057
Identities = 159/174 (91%)
Strand = Plus / Minus
Query: 355 gttgtcagcctctttcttcacaggctcttccttctctgacagaatcagctcaatgtggca 414
|||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 174 gttgtcagcctccttcttcacaggctcttccttctctgacaagatcagctcaatgtggca 115
Query: 415 aggggaggacatgtaagggttaatgcgtccgtgagcacggtaggtgcggcgcctctgctt 474
||| ||||||||||||||| |||||||| ||||||||||| || ||||||||||||||
Sbjct: 114 ggggttggacatgtaagggttgatgcgtccatgagcacggtacgtccggcgcctctgctt 55
Query: 475 ctgggcttggttcacctggatgtgtgaaacatagaggttgtccacgtccaagcc 528
|||||||||||||||||||||||||||| ||||||||||| || ||||||||
Sbjct: 54 ttgggcttggttcacctggatgtgtgaaatgtagaggttgtcgacatccaagcc 1
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 86,145
Number of Sequences: 312970
Number of extensions: 86145
Number of successful extensions: 22326
Number of sequences better than 0.5: 298
Number of HSP's better than 0.5 without gapping: 296
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 21735
Number of HSP's gapped (non-prelim): 493
length of query: 940
length of database: 175,134,539
effective HSP length: 19
effective length of query: 921
effective length of database: 169,188,109
effective search space: 155822248389
effective search space used: 155822248389
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)