BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.628
(1238 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BE216048.2|BE216048 HV_CEb0009E02f Hordeum vulgare seedl... 289 1e-076
gb|BF265932.3|BF265932 HV_CEa0013L11f Hordeum vulgare seedl... 289 1e-076
gb|BQ469204.1|BQ469204 HM03L09r HM Hordeum vulgare subsp. v... 289 1e-076
gb|BQ664195.1|BQ664195 HV02E12u HV Hordeum vulgare subsp. v... 289 1e-076
gb|BM098251.2|BM098251 EBpi03_SQ002_P14_R pistil, 4 DPA, no... 289 1e-076
gb|BQ767681.1|BQ767681 EBro08_SQ009_F16_R root, 3 week, dro... 289 1e-076
gb|BU977735.1|BU977735 HA11P03r HA Hordeum vulgare subsp. v... 289 1e-076
gb|BU981018.1|BU981018 HA22G09r HA Hordeum vulgare subsp. v... 289 1e-076
gb|BU981405.1|BU981405 HA23I11r HA Hordeum vulgare subsp. v... 289 1e-076
gb|BU987916.1|BU987916 HF16C02r HF Hordeum vulgare subsp. v... 289 1e-076
gb|CA016711.1|CA016711 HV06L02u HV Hordeum vulgare subsp. v... 289 1e-076
gb|CA018007.1|CA018007 HV07C03r HV Hordeum vulgare subsp. v... 289 1e-076
gb|CA018867.1|CA018867 HV09O06r HV Hordeum vulgare subsp. v... 289 1e-076
gb|CA029597.1|CA029597 HZ65K18r HZ Hordeum vulgare subsp. v... 289 1e-076
gb|CA029698.1|CA029698 HZ65P05r HZ Hordeum vulgare subsp. v... 289 1e-076
gb|CB882333.1|CB882333 HL01J03w HL Hordeum vulgare subsp. v... 289 1e-076
gb|CK125526.1|CK125526 BES1824109b11 BES1824 Hordeum vulgar... 289 1e-076
gb|BF065279.1|BF065279 HV_CEb0012A02f Hordeum vulgare seedl... 281 3e-074
gb|BF261673.1|BF261673 HV_CEa0001O11f Hordeum vulgare seedl... 281 3e-074
gb|BQ754642.1|BQ754642 EBed01_SQ003_G09_R endosperm, 6 DPA,... 281 3e-074
gb|BU976776.1|BU976776 HA10E18r HA Hordeum vulgare subsp. v... 281 3e-074
gb|BU981498.1|BU981498 HA23M24r HA Hordeum vulgare subsp. v... 281 3e-074
gb|BU986839.1|BU986839 HF13A23r HF Hordeum vulgare subsp. v... 281 3e-074
gb|BU988451.1|BU988451 HF17K22r HF Hordeum vulgare subsp. v... 281 3e-074
gb|BU990358.1|BU990358 HF24M19r HF Hordeum vulgare subsp. v... 281 3e-074
gb|AV912964.1|AV912964 AV912964 K. Sato unpublished cDNA li... 274 7e-072
gb|BJ549141.1|BJ549141 BJ549141 K. Sato unpublished cDNA li... 274 7e-072
gb|CV055378.1|CV055378 BNEL119h8 Barley EST endosperm libra... 274 7e-072
gb|CV062350.1|CV062350 BNEL79a7 Barley EST endosperm librar... 274 7e-072
gb|CV064301.1|CV064301 BNEL9D12 Barley EST endosperm librar... 274 7e-072
gb|L27348.1|BLYCRH1A Hordeum vulgare calreticulin (CRH1) mR... 274 7e-072
gb|L27349.1|BLYCRH2A Hordeum vulgare calreticulin (CRH2) mR... 274 7e-072
gb|BJ549470.1|BJ549470 BJ549470 K. Sato unpublished cDNA li... 268 4e-070
gb|BF621650.2|BF621650 HVSMEa0011L18f Hordeum vulgare seedl... 266 2e-069
gb|BG417286.1|BG417286 HVSMEk0017G08f Hordeum vulgare testa... 266 2e-069
gb|AV913228.1|AV913228 AV913228 K. Sato unpublished cDNA li... 266 2e-069
gb|AV914299.1|AV914299 AV914299 K. Sato unpublished cDNA li... 266 2e-069
gb|AV915153.1|AV915153 AV915153 K. Sato unpublished cDNA li... 266 2e-069
gb|AV915598.1|AV915598 AV915598 K. Sato unpublished cDNA li... 266 2e-069
gb|AV915875.1|AV915875 AV915875 K. Sato unpublished cDNA li... 266 2e-069
gb|BJ549290.1|BJ549290 BJ549290 K. Sato unpublished cDNA li... 266 2e-069
gb|BJ549420.1|BJ549420 BJ549420 K. Sato unpublished cDNA li... 266 2e-069
gb|BJ549593.1|BJ549593 BJ549593 K. Sato unpublished cDNA li... 266 2e-069
gb|AV915883.1|AV915883 AV915883 K. Sato unpublished cDNA li... 262 2e-068
gb|BG299310.1|BG299310 HVSMEa0019F14f Hordeum vulgare seedl... 250 9e-065
gb|BQ761078.1|BQ761078 EBro04_SQ003_L24_R root, 3 week, sal... 236 1e-060
gb|BI954494.1|BI954494 HVSMEm0018E04f Hordeum vulgare green... 232 2e-059
gb|BM377784.2|BM377784 EBem04_SQ004_C16_R embryo, 12 DPA, n... 228 3e-058
gb|BE558911.2|BE558911 HV_CEb0020M02f Hordeum vulgare seedl... 226 1e-057
gb|BJ549145.1|BJ549145 BJ549145 K. Sato unpublished cDNA li... 220 8e-056
gb|CA017920.1|CA017920 HV06M18r HV Hordeum vulgare subsp. v... 218 3e-055
gb|BU982197.1|BU982197 HA25M21r HA Hordeum vulgare subsp. v... 202 2e-050
gb|BU972623.1|BU972623 HB22D13r BC Hordeum vulgare subsp. v... 200 8e-050
gb|BI952915.1|BI952915 HVSMEm0008F20f Hordeum vulgare green... 198 3e-049
gb|BQ459304.1|BQ459304 HA01J09r HA Hordeum vulgare subsp. v... 168 3e-040
gb|BU979055.1|BU979055 HA15A14r HA Hordeum vulgare subsp. v... 168 3e-040
gb|BI947959.1|BI947959 HVSMEl0007J20f Hordeum vulgare spike... 163 2e-038
gb|BQ762911.1|BQ762911 EBro02_SQ006_C13_R root, 3 week, hyd... 153 2e-035
gb|BQ460362.1|BQ460362 HA09O13r HA Hordeum vulgare subsp. v... 141 6e-032
gb|BI776416.2|BI776416 EBpi05_SQ001_D04_R pistil, 8 DPA, no... 141 6e-032
gb|BU979588.1|BU979588 HA16K04r HA Hordeum vulgare subsp. v... 141 6e-032
gb|BU980888.1|BU980888 HA21P22r HA Hordeum vulgare subsp. v... 141 6e-032
gb|BU995532.1|BU995532 HM10I16r HM Hordeum vulgare subsp. v... 141 6e-032
gb|BU996345.1|BU996345 HM13E24r HM Hordeum vulgare subsp. v... 141 6e-032
gb|CK122729.1|CK122729 BES1824105j13 BES1824 Hordeum vulgar... 141 6e-032
gb|CK124387.1|CK124387 BES1824108j17 BES1824 Hordeum vulgar... 141 6e-032
gb|CK125302.1|CK125302 BES1824107k05 BES1824 Hordeum vulgar... 141 6e-032
gb|BI948817.1|BI948817 HVSMEl0010O17f Hordeum vulgare spike... 125 4e-027
gb|CK124943.1|CK124943 BES1824111A2b10 BES1824 Hordeum vulg... 121 6e-026
gb|CA026962.1|CA026962 HZ57H16r HZ Hordeum vulgare subsp. v... 117 9e-025
gb|BM816374.1|BM816374 HB107C09_SK.ab1 HB Hordeum vulgare s... 115 4e-024
gb|BU983563.1|BU983563 HA30C14r HA Hordeum vulgare subsp. v... 107 9e-022
gb|BQ469013.1|BQ469013 HM03B19r HM Hordeum vulgare subsp. v... 80 2e-013
gb|BG344393.2|BG344393 HVSMEg0009C06f Hordeum vulgare pre-a... 76 3e-012
gb|AV913005.1|AV913005 AV913005 K. Sato unpublished cDNA li... 44 0.011
>gb|BE216048.2|BE216048 HV_CEb0009E02f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0009E02f, mRNA sequence
Length = 571
Score = 289 bits (146), Expect = 1e-076
Identities = 256/296 (86%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||||||||||||||| |||||||||||||||||||| | |||||| ||||| |||||||
Sbjct: 502 tgtacccacagatatcgggtccaaacataatgctgtagggtgtgtcgccaccgaatttct 443
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| |||||||| || ||||| |||||||| ||||| |||||||||||||||||||
Sbjct: 442 tctggtcaacatcacctccaagcaacttgacgtaaccaccaccgcagtcaagcttctgct 383
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| |||||||| | |||||||||||| || ||||| ||||||||||||||||||||||| |
Sbjct: 382 catgcttcaccgtgaactgcagcacgagtgtcttgtccttgttgctgaactcagggtact 323
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| || || ||||| ||||||||||| ||||| |||| || |||||||||||||| ||||
Sbjct: 322 ccgccgagatggcgtagaacctgtagtcctcagaggtttggatacctttgtcctcagcat 263
Query: 1081 ctccattccattttcccgaagtnnnnnnnnattcaccagccatgttctcatccttc 1136
|||||| ||||||||| || || ||||||||||||||||||| ||||||
Sbjct: 262 ctccatgccattttccagatgtgtggttccattcaccagccatgttctcgtccttc 207
>gb|BF265932.3|BF265932 HV_CEa0013L11f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0013L11f, mRNA sequence
Length = 563
Score = 289 bits (146), Expect = 1e-076
Identities = 256/296 (86%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||||||||||||||| |||||||||||||||||||| | |||||| ||||| |||||||
Sbjct: 469 tgtacccacagatatcgggtccaaacataatgctgtagggtgtgtcgccaccgaatttct 410
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| |||||||| || ||||| |||||||| ||||| |||||||||||||||||||
Sbjct: 409 tctggtcaacatcacctccaagcaacttgacgtaaccaccaccgcagtcaagcttctgct 350
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| |||||||| | |||||||||||| || ||||| ||||||||||||||||||||||| |
Sbjct: 349 catgcttcaccgtgaactgcagcacgagtgtcttgtccttgttgctgaactcagggtact 290
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| || || ||||| ||||||||||| ||||| |||| || |||||||||||||| ||||
Sbjct: 289 ccgccgagatggcgtagaacctgtagtcctcagaggtttggatacctttgtcctcagcat 230
Query: 1081 ctccattccattttcccgaagtnnnnnnnnattcaccagccatgttctcatccttc 1136
|||||| ||||||||| || || ||||||||||||||||||| ||||||
Sbjct: 229 ctccatgccattttccagatgtgtggttccattcaccagccatgttctcgtccttc 174
>gb|BQ469204.1|BQ469204 HM03L09r HM Hordeum vulgare subsp. vulgare cDNA clone HM03L09
5-PRIME, mRNA sequence
Length = 652
Score = 289 bits (146), Expect = 1e-076
Identities = 256/296 (86%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||||||||||||||| |||||||||||||||||||| | |||||| ||||| |||||||
Sbjct: 505 tgtacccacagatatcgggtccaaacataatgctgtagggtgtgtcgccaccgaatttct 446
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| |||||||| || ||||| |||||||| ||||| |||||||||||||||||||
Sbjct: 445 tctggtcaacatcacctccaagcaacttgacgtaaccaccaccgcagtcaagcttctgct 386
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| |||||||| | |||||||||||| || ||||| ||||||||||||||||||||||| |
Sbjct: 385 catgcttcaccgtgaactgcagcacgagtgtcttgtccttgttgctgaactcagggtact 326
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| || || ||||| ||||||||||| ||||| |||| || |||||||||||||| ||||
Sbjct: 325 ccgccgagatggcgtagaacctgtagtcctcagaggtttggatacctttgtcctcagcat 266
Query: 1081 ctccattccattttcccgaagtnnnnnnnnattcaccagccatgttctcatccttc 1136
|||||| ||||||||| || || ||||||||||||||||||| ||||||
Sbjct: 265 ctccatgccattttccagatgtgtggttccattcaccagccatgttctcgtccttc 210
>gb|BQ664195.1|BQ664195 HV02E12u HV Hordeum vulgare subsp. vulgare cDNA clone HV02E12
3-PRIME, mRNA sequence
Length = 673
Score = 289 bits (146), Expect = 1e-076
Identities = 256/296 (86%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||||||||||||||| |||||||||||||||||||| | |||||| ||||| |||||||
Sbjct: 499 tgtacccacagatatcgggtccaaacataatgctgtagggtgtgtcgccaccgaatttct 440
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| |||||||| || ||||| |||||||| ||||| |||||||||||||||||||
Sbjct: 439 tctggtcaacatcacctccaagcaacttgacgtaaccaccaccgcagtcaagcttctgct 380
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| |||||||| | |||||||||||| || ||||| ||||||||||||||||||||||| |
Sbjct: 379 catgcttcaccgtgaactgcagcacgagtgtcttgtccttgttgctgaactcagggtact 320
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| || || ||||| ||||||||||| ||||| |||| || |||||||||||||| ||||
Sbjct: 319 ccgccgagatggcgtagaacctgtagtcctcagaggtttggatacctttgtcctcagcat 260
Query: 1081 ctccattccattttcccgaagtnnnnnnnnattcaccagccatgttctcatccttc 1136
|||||| ||||||||| || || ||||||||||||||||||| ||||||
Sbjct: 259 ctccatgccattttccagatgtgtggttccattcaccagccatgttctcgtccttc 204
>gb|BM098251.2|BM098251 EBpi03_SQ002_P14_R pistil, 4 DPA, no treatment, cv Optic, EBpi03
Hordeum vulgare subsp. vulgare cDNA clone
EBpi03_SQ002_P14 5', mRNA sequence
Length = 623
Score = 289 bits (146), Expect = 1e-076
Identities = 256/296 (86%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||||||||||||||| |||||||||||||||||||| | |||||| ||||| |||||||
Sbjct: 488 tgtacccacagatatcgggtccaaacataatgctgtagggtgtgtcgccaccgaatttct 429
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| |||||||| || ||||| |||||||| ||||| |||||||||||||||||||
Sbjct: 428 tctggtcaacatcacctccaagcaacttgacgtaaccaccaccgcagtcaagcttctgct 369
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| |||||||| | |||||||||||| || ||||| ||||||||||||||||||||||| |
Sbjct: 368 catgcttcaccgtgaactgcagcacgagtgtcttgtccttgttgctgaactcagggtact 309
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| || || ||||| ||||||||||| ||||| |||| || |||||||||||||| ||||
Sbjct: 308 ccgccgagatggcgtagaacctgtagtcctcagaggtttggatacctttgtcctcagcat 249
Query: 1081 ctccattccattttcccgaagtnnnnnnnnattcaccagccatgttctcatccttc 1136
|||||| ||||||||| || || ||||||||||||||||||| ||||||
Sbjct: 248 ctccatgccattttccagatgtgtggttccattcaccagccatgttctcgtccttc 193
>gb|BQ767681.1|BQ767681 EBro08_SQ009_F16_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ009_F16 5', mRNA sequence
Length = 644
Score = 289 bits (146), Expect = 1e-076
Identities = 256/296 (86%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||||||||||||||| |||||||||||||||||||| | |||||| ||||| |||||||
Sbjct: 492 tgtacccacagatatcgggtccaaacataatgctgtagggtgtgtcgccaccgaatttct 433
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| |||||||| || ||||| |||||||| ||||| |||||||||||||||||||
Sbjct: 432 tctggtcaacatcacctccaagcaacttgacgtaaccaccaccgcagtcaagcttctgct 373
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| |||||||| | |||||||||||| || ||||| ||||||||||||||||||||||| |
Sbjct: 372 catgcttcaccgtgaactgcagcacgagtgtcttgtccttgttgctgaactcagggtact 313
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| || || ||||| ||||||||||| ||||| |||| || |||||||||||||| ||||
Sbjct: 312 ccgccgagatggcgtagaacctgtagtcctcagaggtttggatacctttgtcctcagcat 253
Query: 1081 ctccattccattttcccgaagtnnnnnnnnattcaccagccatgttctcatccttc 1136
|||||| ||||||||| || || ||||||||||||||||||| ||||||
Sbjct: 252 ctccatgccattttccagatgtgtggttccattcaccagccatgttctcgtccttc 197
>gb|BU977735.1|BU977735 HA11P03r HA Hordeum vulgare subsp. vulgare cDNA clone HA11P03
5-PRIME, mRNA sequence
Length = 546
Score = 289 bits (146), Expect = 1e-076
Identities = 256/296 (86%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||||||||||||||| |||||||||||||||||||| | |||||| ||||| |||||||
Sbjct: 505 tgtacccacagatatcgggtccaaacataatgctgtagggtgtgtcgccaccgaatttct 446
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| |||||||| || ||||| |||||||| ||||| |||||||||||||||||||
Sbjct: 445 tctggtcaacatcacctccaagcaacttgacgtaaccaccaccgcagtcaagcttctgct 386
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| |||||||| | |||||||||||| || ||||| ||||||||||||||||||||||| |
Sbjct: 385 catgcttcaccgtgaactgcagcacgagtgtcttgtccttgttgctgaactcagggtact 326
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| || || ||||| ||||||||||| ||||| |||| || |||||||||||||| ||||
Sbjct: 325 ccgccgagatggcgtagaacctgtagtcctcagaggtttggatacctttgtcctcagcat 266
Query: 1081 ctccattccattttcccgaagtnnnnnnnnattcaccagccatgttctcatccttc 1136
|||||| ||||||||| || || ||||||||||||||||||| ||||||
Sbjct: 265 ctccatgccattttccagatgtgtggttccattcaccagccatgttctcgtccttc 210
>gb|BU981018.1|BU981018 HA22G09r HA Hordeum vulgare subsp. vulgare cDNA clone HA22G09
5-PRIME, mRNA sequence
Length = 639
Score = 289 bits (146), Expect = 1e-076
Identities = 256/296 (86%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||||||||||||||| |||||||||||||||||||| | |||||| ||||| |||||||
Sbjct: 498 tgtacccacagatatcgggtccaaacataatgctgtagggtgtgtcgccaccgaatttct 439
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| |||||||| || ||||| |||||||| ||||| |||||||||||||||||||
Sbjct: 438 tctggtcaacatcacctccaagcaacttgacgtaaccaccaccgcagtcaagcttctgct 379
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| |||||||| | |||||||||||| || ||||| ||||||||||||||||||||||| |
Sbjct: 378 catgcttcaccgtgaactgcagcacgagtgtcttgtccttgttgctgaactcagggtact 319
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| || || ||||| ||||||||||| ||||| |||| || |||||||||||||| ||||
Sbjct: 318 ccgccgagatggcgtagaacctgtagtcctcagaggtttggatacctttgtcctcagcat 259
Query: 1081 ctccattccattttcccgaagtnnnnnnnnattcaccagccatgttctcatccttc 1136
|||||| ||||||||| || || ||||||||||||||||||| ||||||
Sbjct: 258 ctccatgccattttccagatgtgtggttccattcaccagccatgttctcgtccttc 203
>gb|BU981405.1|BU981405 HA23I11r HA Hordeum vulgare subsp. vulgare cDNA clone HA23I11
5-PRIME, mRNA sequence
Length = 587
Score = 289 bits (146), Expect = 1e-076
Identities = 256/296 (86%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||||||||||||||| |||||||||||||||||||| | |||||| ||||| |||||||
Sbjct: 497 tgtacccacagatatcgggtccaaacataatgctgtagggtgtgtcgccaccgaatttct 438
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| |||||||| || ||||| |||||||| ||||| |||||||||||||||||||
Sbjct: 437 tctggtcaacatcacctccaagcaacttgacgtaaccaccaccgcagtcaagcttctgct 378
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| |||||||| | |||||||||||| || ||||| ||||||||||||||||||||||| |
Sbjct: 377 catgcttcaccgtgaactgcagcacgagtgtcttgtccttgttgctgaactcagggtact 318
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| || || ||||| ||||||||||| ||||| |||| || |||||||||||||| ||||
Sbjct: 317 ccgccgagatggcgtagaacctgtagtcctcagaggtttggatacctttgtcctcagcat 258
Query: 1081 ctccattccattttcccgaagtnnnnnnnnattcaccagccatgttctcatccttc 1136
|||||| ||||||||| || || ||||||||||||||||||| ||||||
Sbjct: 257 ctccatgccattttccagatgtgtggttccattcaccagccatgttctcgtccttc 202
>gb|BU987916.1|BU987916 HF16C02r HF Hordeum vulgare subsp. vulgare cDNA clone HF16C02
5-PRIME, mRNA sequence
Length = 617
Score = 289 bits (146), Expect = 1e-076
Identities = 256/296 (86%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||||||||||||||| |||||||||||||||||||| | |||||| ||||| |||||||
Sbjct: 411 tgtacccacagatatcgggtccaaacataatgctgtagggtgtgtcgccaccgaatttct 352
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| |||||||| || ||||| |||||||| ||||| |||||||||||||||||||
Sbjct: 351 tctggtcaacatcacctccaagcaacttgacgtaaccaccaccgcagtcaagcttctgct 292
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| |||||||| | |||||||||||| || ||||| ||||||||||||||||||||||| |
Sbjct: 291 catgcttcaccgtgaactgcagcacgagtgtcttgtccttgttgctgaactcagggtact 232
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| || || ||||| ||||||||||| ||||| |||| || |||||||||||||| ||||
Sbjct: 231 ccgccgagatggcgtagaacctgtagtcctcagaggtttggatacctttgtcctcagcat 172
Query: 1081 ctccattccattttcccgaagtnnnnnnnnattcaccagccatgttctcatccttc 1136
|||||| ||||||||| || || ||||||||||||||||||| ||||||
Sbjct: 171 ctccatgccattttccagatgtgtggttccattcaccagccatgttctcgtccttc 116
>gb|CA016711.1|CA016711 HV06L02u HV Hordeum vulgare subsp. vulgare cDNA clone HV06L02
3-PRIME, mRNA sequence
Length = 549
Score = 289 bits (146), Expect = 1e-076
Identities = 256/296 (86%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||||||||||||||| |||||||||||||||||||| | |||||| ||||| |||||||
Sbjct: 499 tgtacccacagatatcgggtccaaacataatgctgtagggtgtgtcgccaccgaatttct 440
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| |||||||| || ||||| |||||||| ||||| |||||||||||||||||||
Sbjct: 439 tctggtcaacatcacctccaagcaacttgacgtaaccaccaccgcagtcaagcttctgct 380
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| |||||||| | |||||||||||| || ||||| ||||||||||||||||||||||| |
Sbjct: 379 catgcttcaccgtgaactgcagcacgagtgtcttgtccttgttgctgaactcagggtact 320
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| || || ||||| ||||||||||| ||||| |||| || |||||||||||||| ||||
Sbjct: 319 ccgccgagatggcgtagaacctgtagtcctcagaggtttggatacctttgtcctcagcat 260
Query: 1081 ctccattccattttcccgaagtnnnnnnnnattcaccagccatgttctcatccttc 1136
|||||| ||||||||| || || ||||||||||||||||||| ||||||
Sbjct: 259 ctccatgccattttccagatgtgtggttccattcaccagccatgttctcgtccttc 204
>gb|CA018007.1|CA018007 HV07C03r HV Hordeum vulgare subsp. vulgare cDNA clone HV07C03
5-PRIME, mRNA sequence
Length = 528
Score = 289 bits (146), Expect = 1e-076
Identities = 256/296 (86%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||||||||||||||| |||||||||||||||||||| | |||||| ||||| |||||||
Sbjct: 509 tgtacccacagatatcgggtccaaacataatgctgtagggtgtgtcgccaccgaatttct 450
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| |||||||| || ||||| |||||||| ||||| |||||||||||||||||||
Sbjct: 449 tctggtcaacatcacctccaagcaacttgacgtaaccaccaccgcagtcaagcttctgct 390
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| |||||||| | |||||||||||| || ||||| ||||||||||||||||||||||| |
Sbjct: 389 catgcttcaccgtgaactgcagcacgagtgtcttgtccttgttgctgaactcagggtact 330
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| || || ||||| ||||||||||| ||||| |||| || |||||||||||||| ||||
Sbjct: 329 ccgccgagatggcgtagaacctgtagtcctcagaggtttggatacctttgtcctcagcat 270
Query: 1081 ctccattccattttcccgaagtnnnnnnnnattcaccagccatgttctcatccttc 1136
|||||| ||||||||| || || ||||||||||||||||||| ||||||
Sbjct: 269 ctccatgccattttccagatgtgtggttccattcaccagccatgttctcgtccttc 214
>gb|CA018867.1|CA018867 HV09O06r HV Hordeum vulgare subsp. vulgare cDNA clone HV09O06
5-PRIME, mRNA sequence
Length = 649
Score = 289 bits (146), Expect = 1e-076
Identities = 256/296 (86%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||||||||||||||| |||||||||||||||||||| | |||||| ||||| |||||||
Sbjct: 503 tgtacccacagatatcgggtccaaacataatgctgtagggtgtgtcgccaccgaatttct 444
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| |||||||| || ||||| |||||||| ||||| |||||||||||||||||||
Sbjct: 443 tctggtcaacatcacctccaagcaacttgacgtaaccaccaccgcagtcaagcttctgct 384
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| |||||||| | |||||||||||| || ||||| ||||||||||||||||||||||| |
Sbjct: 383 catgcttcaccgtgaactgcagcacgagtgtcttgtccttgttgctgaactcagggtact 324
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| || || ||||| ||||||||||| ||||| |||| || |||||||||||||| ||||
Sbjct: 323 ccgccgagatggcgtagaacctgtagtcctcagaggtttggatacctttgtcctcagcat 264
Query: 1081 ctccattccattttcccgaagtnnnnnnnnattcaccagccatgttctcatccttc 1136
|||||| ||||||||| || || ||||||||||||||||||| ||||||
Sbjct: 263 ctccatgccattttccagatgtgtggttccattcaccagccatgttctcgtccttc 208
>gb|CA029597.1|CA029597 HZ65K18r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ65K18
5-PRIME, mRNA sequence
Length = 652
Score = 289 bits (146), Expect = 1e-076
Identities = 256/296 (86%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||||||||||||||| |||||||||||||||||||| | |||||| ||||| |||||||
Sbjct: 515 tgtacccacagatatcgggtccaaacataatgctgtagggtgtgtcgccaccgaatttct 456
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| |||||||| || ||||| |||||||| ||||| |||||||||||||||||||
Sbjct: 455 tctggtcaacatcacctccaagcaacttgacgtaaccaccaccgcagtcaagcttctgct 396
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| |||||||| | |||||||||||| || ||||| ||||||||||||||||||||||| |
Sbjct: 395 catgcttcaccgtgaactgcagcacgagtgtcttgtccttgttgctgaactcagggtact 336
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| || || ||||| ||||||||||| ||||| |||| || |||||||||||||| ||||
Sbjct: 335 ccgccgagatggcgtagaacctgtagtcctcagaggtttggatacctttgtcctcagcat 276
Query: 1081 ctccattccattttcccgaagtnnnnnnnnattcaccagccatgttctcatccttc 1136
|||||| ||||||||| || || ||||||||||||||||||| ||||||
Sbjct: 275 ctccatgccattttccagatgtgtggttccattcaccagccatgttctcgtccttc 220
>gb|CA029698.1|CA029698 HZ65P05r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ65P05
5-PRIME, mRNA sequence
Length = 597
Score = 289 bits (146), Expect = 1e-076
Identities = 256/296 (86%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||||||||||||||| |||||||||||||||||||| | |||||| ||||| |||||||
Sbjct: 505 tgtacccacagatatcgggtccaaacataatgctgtagggtgtgtcgccaccgaatttct 446
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| |||||||| || ||||| |||||||| ||||| |||||||||||||||||||
Sbjct: 445 tctggtcaacatcacctccaagcaacttgacgtaaccaccaccgcagtcaagcttctgct 386
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| |||||||| | |||||||||||| || ||||| ||||||||||||||||||||||| |
Sbjct: 385 catgcttcaccgtgaactgcagcacgagtgtcttgtccttgttgctgaactcagggtact 326
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| || || ||||| ||||||||||| ||||| |||| || |||||||||||||| ||||
Sbjct: 325 ccgccgagatggcgtagaacctgtagtcctcagaggtttggatacctttgtcctcagcat 266
Query: 1081 ctccattccattttcccgaagtnnnnnnnnattcaccagccatgttctcatccttc 1136
|||||| ||||||||| || || ||||||||||||||||||| ||||||
Sbjct: 265 ctccatgccattttccagatgtgtggttccattcaccagccatgttctcgtccttc 210
>gb|CB882333.1|CB882333 HL01J03w HL Hordeum vulgare subsp. vulgare cDNA clone HL01J03
3-PRIME, mRNA sequence
Length = 619
Score = 289 bits (146), Expect = 1e-076
Identities = 256/296 (86%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||||||||||||||| |||||||||||||||||||| | |||||| ||||| |||||||
Sbjct: 478 tgtacccacagatatcgggtccaaacataatgctgtagggtgtgtcgccaccgaatttct 419
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| |||||||| || ||||| |||||||| ||||| |||||||||||||||||||
Sbjct: 418 tctggtcaacatcacctccaagcaacttgacgtaaccaccaccgcagtcaagcttctgct 359
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| |||||||| | |||||||||||| || ||||| ||||||||||||||||||||||| |
Sbjct: 358 catgcttcaccgtgaactgcagcacgagtgtcttgtccttgttgctgaactcagggtact 299
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| || || ||||| ||||||||||| ||||| |||| || |||||||||||||| ||||
Sbjct: 298 ccgccgagatggcgtagaacctgtagtcctcagaggtttggatacctttgtcctcagcat 239
Query: 1081 ctccattccattttcccgaagtnnnnnnnnattcaccagccatgttctcatccttc 1136
|||||| ||||||||| || || ||||||||||||||||||| ||||||
Sbjct: 238 ctccatgccattttccagatgtgtggttccattcaccagccatgttctcgtccttc 183
>gb|CK125526.1|CK125526 BES1824109b11 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010B119 5-PRIME, mRNA sequence
Length = 797
Score = 289 bits (146), Expect = 1e-076
Identities = 256/296 (86%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||||||||||||||| |||||||||||||||||||| | |||||| ||||| |||||||
Sbjct: 504 tgtacccacagatatcgggtccaaacataatgctgtagggtgtgtcgccaccgaatttct 445
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| |||||||| || ||||| |||||||| ||||| |||||||||||||||||||
Sbjct: 444 tctggtcaacatcacctccaagcaacttgacgtaaccaccaccgcagtcaagcttctgct 385
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| |||||||| | |||||||||||| || ||||| ||||||||||||||||||||||| |
Sbjct: 384 catgcttcaccgtgaactgcagcacgagtgtcttgtccttgttgctgaactcagggtact 325
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| || || ||||| ||||||||||| ||||| |||| || |||||||||||||| ||||
Sbjct: 324 ccgccgagatggcgtagaacctgtagtcctcagaggtttggatacctttgtcctcagcat 265
Query: 1081 ctccattccattttcccgaagtnnnnnnnnattcaccagccatgttctcatccttc 1136
|||||| ||||||||| || || ||||||||||||||||||| ||||||
Sbjct: 264 ctccatgccattttccagatgtgtggttccattcaccagccatgttctcgtccttc 209
>gb|BF065279.1|BF065279 HV_CEb0012A02f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0012A02f, mRNA sequence
Length = 617
Score = 281 bits (142), Expect = 3e-074
Identities = 255/296 (86%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
||||||||||||||| |||||||||||||||||||| | |||||| ||||| |||||||
Sbjct: 539 tgtacccacagatatggggtccaaacataatgctgtagggtgtgtcgccaccgaatttct 480
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| |||||||| || ||||| |||||||| ||||| |||||||||||||||||||
Sbjct: 479 tctggtcaacatcacctccaagcaacttgacgtaaccaccaccgcagtcaagcttctgct 420
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| |||||||| | |||||||||||| || ||||| ||||||||||||||||||||||| |
Sbjct: 419 catgcttcaccgtgaactgcagcacgagtgtcttgtccttgttgctgaactcagggtact 360
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| || || ||||| ||||||||||| ||||| |||| || |||||||||||||| ||||
Sbjct: 359 ccgccgagatggcgtagaacctgtagtcctcagaggtttggatacctttgtcctcagcat 300
Query: 1081 ctccattccattttcccgaagtnnnnnnnnattcaccagccatgttctcatccttc 1136
|||||| ||||||||| || || ||||||||||||||||||| ||||||
Sbjct: 299 ctccatgccattttccagatgtgtggttccattcaccagccatgttctcgtccttc 244
>gb|BF261673.1|BF261673 HV_CEa0001O11f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0001O11f, mRNA sequence
Length = 841
Score = 281 bits (142), Expect = 3e-074
Identities = 255/296 (86%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||||||||||||||| |||||||||||||||||||| | |||||| ||||| |||||||
Sbjct: 501 tgtacccacagatatcgggtccaaacataatgctgtagggtgtgtcgccaccgaatttct 442
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| |||||||| || ||||| |||||||| ||||| |||||||||||||||||||
Sbjct: 441 tctggtcaacatcacctccaagcaacttgacgtaaccaccaccgcagtcaagcttctgct 382
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| |||||||| | |||||||||||| || ||||| ||||||||||||||||||||||| |
Sbjct: 381 catgcttcaccgtgaactgcagcacgagtgtcttgtccttgttgctgaactcagggtact 322
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| || || ||||| ||||||||||| ||||| |||| || |||||||||||||| ||||
Sbjct: 321 ccgccgagatggcgtagaacctgtagtcctcagaggtttggatacctttgtcctcagcat 262
Query: 1081 ctccattccattttcccgaagtnnnnnnnnattcaccagccatgttctcatccttc 1136
||||| ||||||||| || || ||||||||||||||||||| ||||||
Sbjct: 261 ttccatgccattttccagatgtgtggttccattcaccagccatgttctcgtccttc 206
>gb|BQ754642.1|BQ754642 EBed01_SQ003_G09_R endosperm, 6 DPA, no treatment, cv Optic, EBed01
Hordeum vulgare subsp. vulgare cDNA clone
EBed01_SQ003_G09 5', mRNA sequence
Length = 625
Score = 281 bits (142), Expect = 3e-074
Identities = 227/256 (88%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||||||||||||||| |||||||||||||||||||| | |||||| ||||| |||||||
Sbjct: 289 tgtacccacagatatcgggtccaaacataatgctgtagggtgtgtcgccaccgaatttct 230
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| |||||||| || ||||| |||||||| ||||| |||||||||||||||||||
Sbjct: 229 tctggtcaacatcacctccaagcaacttgacgtaaccaccaccgcagtcaagcttctgct 170
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| |||||||| | |||||||||||| || ||||| ||||||||||||||||||||||| |
Sbjct: 169 catgcttcaccgtgaactgcagcacgagtgtcttgtccttgttgctgaactcagggtact 110
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| || || ||||| ||||||||||| ||||| |||| || |||||||||||||| ||||
Sbjct: 109 ccgccgagatggcgtagaacctgtagtcctcagaggtttggatacctttgtcctcagcat 50
Query: 1081 ctccattccattttcc 1096
|||||| |||||||||
Sbjct: 49 ctccatgccattttcc 34
>gb|BU976776.1|BU976776 HA10E18r HA Hordeum vulgare subsp. vulgare cDNA clone HA10E18
5-PRIME, mRNA sequence
Length = 633
Score = 281 bits (142), Expect = 3e-074
Identities = 227/256 (88%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||||||||||||||| |||||||||||||||||||| | |||||| ||||| |||||||
Sbjct: 286 tgtacccacagatatcgggtccaaacataatgctgtagggtgtgtcgccaccgaatttct 227
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| |||||||| || ||||| |||||||| ||||| |||||||||||||||||||
Sbjct: 226 tctggtcaacatcacctccaagcaacttgacgtaaccaccaccgcagtcaagcttctgct 167
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| |||||||| | |||||||||||| || ||||| ||||||||||||||||||||||| |
Sbjct: 166 catgcttcaccgtgaactgcagcacgagtgtcttgtccttgttgctgaactcagggtact 107
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| || || ||||| ||||||||||| ||||| |||| || |||||||||||||| ||||
Sbjct: 106 ccgccgagatggcgtagaacctgtagtcctcagaggtttggatacctttgtcctcagcat 47
Query: 1081 ctccattccattttcc 1096
|||||| |||||||||
Sbjct: 46 ctccatgccattttcc 31
>gb|BU981498.1|BU981498 HA23M24r HA Hordeum vulgare subsp. vulgare cDNA clone HA23M24
5-PRIME, mRNA sequence
Length = 587
Score = 281 bits (142), Expect = 3e-074
Identities = 227/256 (88%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||||||||||||||| |||||||||||||||||||| | |||||| ||||| |||||||
Sbjct: 286 tgtacccacagatatcgggtccaaacataatgctgtagggtgtgtcgccaccgaatttct 227
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| |||||||| || ||||| |||||||| ||||| |||||||||||||||||||
Sbjct: 226 tctggtcaacatcacctccaagcaacttgacgtaaccaccaccgcagtcaagcttctgct 167
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| |||||||| | |||||||||||| || ||||| ||||||||||||||||||||||| |
Sbjct: 166 catgcttcaccgtgaactgcagcacgagtgtcttgtccttgttgctgaactcagggtact 107
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| || || ||||| ||||||||||| ||||| |||| || |||||||||||||| ||||
Sbjct: 106 ccgccgagatggcgtagaacctgtagtcctcagaggtttggatacctttgtcctcagcat 47
Query: 1081 ctccattccattttcc 1096
|||||| |||||||||
Sbjct: 46 ctccatgccattttcc 31
>gb|BU986839.1|BU986839 HF13A23r HF Hordeum vulgare subsp. vulgare cDNA clone HF13A23
5-PRIME, mRNA sequence
Length = 605
Score = 281 bits (142), Expect = 3e-074
Identities = 227/256 (88%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||||||||||||||| |||||||||||||||||||| | |||||| ||||| |||||||
Sbjct: 340 tgtacccacagatatcgggtccaaacataatgctgtagggtgtgtcgccaccgaatttct 281
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| |||||||| || ||||| |||||||| ||||| |||||||||||||||||||
Sbjct: 280 tctggtcaacatcacctccaagcaacttgacgtaaccaccaccgcagtcaagcttctgct 221
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| |||||||| | |||||||||||| || ||||| ||||||||||||||||||||||| |
Sbjct: 220 catgcttcaccgtgaactgcagcacgagtgtcttgtccttgttgctgaactcagggtact 161
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| || || ||||| ||||||||||| ||||| |||| || |||||||||||||| ||||
Sbjct: 160 ccgccgagatggcgtagaacctgtagtcctcagaggtttggatacctttgtcctcagcat 101
Query: 1081 ctccattccattttcc 1096
|||||| |||||||||
Sbjct: 100 ctccatgccattttcc 85
>gb|BU988451.1|BU988451 HF17K22r HF Hordeum vulgare subsp. vulgare cDNA clone HF17K22
5-PRIME, mRNA sequence
Length = 616
Score = 281 bits (142), Expect = 3e-074
Identities = 227/256 (88%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||||||||||||||| |||||||||||||||||||| | |||||| ||||| |||||||
Sbjct: 410 tgtacccacagatatcgggtccaaacataatgctgtagggtgtgtcgccaccgaatttct 351
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| |||||||| || ||||| |||||||| ||||| |||||||||||||||||||
Sbjct: 350 tctggtcaacatcacctccaagcaacttgacgtaaccaccaccgcagtcaagcttctgct 291
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| |||||||| | |||||||||||| || ||||| ||||||||||||||||||||||| |
Sbjct: 290 catgcttcaccgtgaactgcagcacgagtgtcttgtccttgttgctgaactcagggtact 231
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| || || ||||| ||||||||||| ||||| |||| || |||||||||||||| ||||
Sbjct: 230 ccgccgagatggcgtagaacctgtagtcctcagaggtttggatacctttgtcctcagcat 171
Query: 1081 ctccattccattttcc 1096
|||||| |||||||||
Sbjct: 170 ctccatgccattttcc 155
>gb|BU990358.1|BU990358 HF24M19r HF Hordeum vulgare subsp. vulgare cDNA clone HF24M19
5-PRIME, mRNA sequence
Length = 622
Score = 281 bits (142), Expect = 3e-074
Identities = 227/256 (88%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||||||||||||||| |||||||||||||||||||| | |||||| ||||| |||||||
Sbjct: 322 tgtacccacagatatcgggtccaaacataatgctgtagggtgtgtcgccaccgaatttct 263
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| |||||||| || ||||| |||||||| ||||| |||||||||||||||||||
Sbjct: 262 tctggtcaacatcacctccaagcaacttgacgtaaccaccaccgcagtcaagcttctgct 203
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| |||||||| | |||||||||||| || ||||| ||||||||||||||||||||||| |
Sbjct: 202 catgcttcaccgtgaactgcagcacgagtgtcttgtccttgttgctgaactcagggtact 143
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| || || ||||| ||||||||||| ||||| |||| || |||||||||||||| ||||
Sbjct: 142 ccgccgagatggcgtagaacctgtagtcctcagaggtttggatacctttgtcctcagcat 83
Query: 1081 ctccattccattttcc 1096
|||||| |||||||||
Sbjct: 82 ctccatgccattttcc 67
>gb|AV912964.1|AV912964 AV912964 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags11c19 5', mRNA sequence
Length = 588
Score = 274 bits (138), Expect = 7e-072
Identities = 254/296 (85%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||||||||||||||| |||||||||||||||| ||| | |||||| ||||| |||||||
Sbjct: 393 tgtacccacagatatcgggtccaaacataatgccgtagggtgtgtcgccaccgaatttct 334
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| |||||||| || ||||| |||||||| ||||| ||||| |||||||||||||
Sbjct: 333 tctggtcaacatcacctccaagcaacttgacgtaaccaccaccgcaatcaagcttctgct 274
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| |||||||| | |||||||||||| || ||||| ||||||||||||||||||||||| |
Sbjct: 273 catgcttcaccgtgaactgcagcacgagtgtcttgtccttgttgctgaactcagggtact 214
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| || || ||||| ||||||||||| ||||| |||| || |||||||||||||| ||||
Sbjct: 213 ccgcagagatggcgtagaacctgtagtcctcagaggtttggatacctttgtcctcagcat 154
Query: 1081 ctccattccattttcccgaagtnnnnnnnnattcaccagccatgttctcatccttc 1136
|||||| ||||||||| || || ||||||||||||||||||| ||||||
Sbjct: 153 ctccatgccattttccagatgtgtggttccattcaccagccatgttctcgtccttc 98
>gb|BJ549141.1|BJ549141 BJ549141 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags24b16 5', mRNA sequence
Length = 519
Score = 274 bits (138), Expect = 7e-072
Identities = 254/296 (85%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||||||||||||||| |||||||||||||||| ||| | |||||| ||||| |||||||
Sbjct: 296 tgtacccacagatatcgggtccaaacataatgccgtagggtgtgtcgccaccgaatttct 237
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| |||||||| || ||||| |||||||| ||||| ||||| |||||||||||||
Sbjct: 236 tctggtcaacatcacctccaagcaacttgacgtaaccaccaccgcaatcaagcttctgct 177
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| |||||||| | |||||||||||| || ||||| ||||||||||||||||||||||| |
Sbjct: 176 catgcttcaccgtgaactgcagcacgagtgtcttgtccttgttgctgaactcagggtact 117
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| || || ||||| ||||||||||| ||||| |||| || |||||||||||||| ||||
Sbjct: 116 ccgcagagatggcgtagaacctgtagtcctcagaggtttggatacctttgtcctcagcat 57
Query: 1081 ctccattccattttcccgaagtnnnnnnnnattcaccagccatgttctcatccttc 1136
|||||| ||||||||| || || ||||||||||||||||||| ||||||
Sbjct: 56 ctccatgccattttccagatgtgtggttccattcaccagccatgttctcgtccttc 1
>gb|CV055378.1|CV055378 BNEL119h8 Barley EST endosperm library Hordeum vulgare subsp. vulgare
cDNA clone BNEL119h8 5' similar to calreticulin - barley,
mRNA sequence
Length = 713
Score = 274 bits (138), Expect = 7e-072
Identities = 254/296 (85%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||||||||||||||| |||||||||||||||| ||| | |||||| ||||| |||||||
Sbjct: 492 tgtacccacagatatcgggtccaaacataatgccgtagggtgtgtcgccaccgaatttct 433
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| |||||||| || ||||| |||||||| ||||| ||||| |||||||||||||
Sbjct: 432 tctggtcaacatcacctccaagcaacttgacgtaaccaccaccgcaatcaagcttctgct 373
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| |||||||| | |||||||||||| || ||||| ||||||||||||||||||||||| |
Sbjct: 372 catgcttcaccgtgaactgcagcacgagtgtcttgtccttgttgctgaactcagggtact 313
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| || || ||||| ||||||||||| ||||| |||| || |||||||||||||| ||||
Sbjct: 312 ccgcagagatggcgtagaacctgtagtcctcagaggtttggatacctttgtcctcagcat 253
Query: 1081 ctccattccattttcccgaagtnnnnnnnnattcaccagccatgttctcatccttc 1136
|||||| ||||||||| || || ||||||||||||||||||| ||||||
Sbjct: 252 ctccatgccattttccagatgtgtggttccattcaccagccatgttctcgtccttc 197
>gb|CV062350.1|CV062350 BNEL79a7 Barley EST endosperm library Hordeum vulgare subsp. vulgare
cDNA clone BNEL79a7 5' similar to calreticulin - barley,
mRNA sequence
Length = 700
Score = 274 bits (138), Expect = 7e-072
Identities = 254/296 (85%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||||||||||||||| |||||||||||||||| ||| | |||||| ||||| |||||||
Sbjct: 496 tgtacccacagatatcgggtccaaacataatgccgtagggtgtgtcgccaccgaatttct 437
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| |||||||| || ||||| |||||||| ||||| ||||| |||||||||||||
Sbjct: 436 tctggtcaacatcacctccaagcaacttgacgtaaccaccaccgcaatcaagcttctgct 377
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| |||||||| | |||||||||||| || ||||| ||||||||||||||||||||||| |
Sbjct: 376 catgcttcaccgtgaactgcagcacgagtgtcttgtccttgttgctgaactcagggtact 317
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| || || ||||| ||||||||||| ||||| |||| || |||||||||||||| ||||
Sbjct: 316 ccgcagagatggcgtagaacctgtagtcctcagaggtttggatacctttgtcctcagcat 257
Query: 1081 ctccattccattttcccgaagtnnnnnnnnattcaccagccatgttctcatccttc 1136
|||||| ||||||||| || || ||||||||||||||||||| ||||||
Sbjct: 256 ctccatgccattttccagatgtgtggttccattcaccagccatgttctcgtccttc 201
>gb|CV064301.1|CV064301 BNEL9D12 Barley EST endosperm library Hordeum vulgare subsp. vulgare
cDNA clone BNEL9D12 5' similar to calreticulin - barley,
mRNA sequence
Length = 609
Score = 274 bits (138), Expect = 7e-072
Identities = 254/296 (85%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||||||||||||||| |||||||||||||||| ||| | |||||| ||||| |||||||
Sbjct: 495 tgtacccacagatatcgggtccaaacataatgccgtagggtgtgtcgccaccgaatttct 436
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| |||||||| || ||||| |||||||| ||||| ||||| |||||||||||||
Sbjct: 435 tctggtcaacatcacctccaagcaacttgacgtaaccaccaccgcaatcaagcttctgct 376
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| |||||||| | |||||||||||| || ||||| ||||||||||||||||||||||| |
Sbjct: 375 catgcttcaccgtgaactgcagcacgagtgtcttgtccttgttgctgaactcagggtact 316
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| || || ||||| ||||||||||| ||||| |||| || |||||||||||||| ||||
Sbjct: 315 ccgcagagatggcgtagaacctgtagtcctcagaggtttggatacctttgtcctcagcat 256
Query: 1081 ctccattccattttcccgaagtnnnnnnnnattcaccagccatgttctcatccttc 1136
|||||| ||||||||| || || ||||||||||||||||||| ||||||
Sbjct: 255 ctccatgccattttccagatgtgtggttccattcaccagccatgttctcgtccttc 200
>gb|L27348.1|BLYCRH1A Hordeum vulgare calreticulin (CRH1) mRNA, partial cds
Length = 1472
Score = 274 bits (138), Expect = 7e-072
Identities = 254/296 (85%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||||||||||||||| |||||||||||||||| ||| | |||||| ||||| |||||||
Sbjct: 417 tgtacccacagatatcgggtccaaacataatgccgtagggtgtgtcgccaccgaatttct 358
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| |||||||| || ||||| |||||||| ||||| ||||| |||||||||||||
Sbjct: 357 tctggtcaacatcacctccaagcaacttgacgtaaccaccaccgcaatcaagcttctgct 298
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| |||||||| | |||||||||||| || ||||| ||||||||||||||||||||||| |
Sbjct: 297 catgcttcaccgtgaactgcagcacgagtgtcttgtccttgttgctgaactcagggtact 238
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| || || ||||| ||||||||||| ||||| |||| || |||||||||||||| ||||
Sbjct: 237 ccgcagagatggcgtagaacctgtagtcctcagaggtttggatacctttgtcctcagcat 178
Query: 1081 ctccattccattttcccgaagtnnnnnnnnattcaccagccatgttctcatccttc 1136
|||||| ||||||||| || || ||||||||||||||||||| ||||||
Sbjct: 177 ctccatgccattttccagatgtgtggttccattcaccagccatgttctcgtccttc 122
>gb|L27349.1|BLYCRH2A Hordeum vulgare calreticulin (CRH2) mRNA, partial cds
Length = 1450
Score = 274 bits (138), Expect = 7e-072
Identities = 254/296 (85%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||||||||||||||| |||||||||||||||| ||| | |||||| ||||| |||||||
Sbjct: 425 tgtacccacagatatcgggtccaaacataatgccgtagggtgtgtcgccaccgaatttct 366
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| |||||||| || ||||| |||||||| ||||| ||||| |||||||||||||
Sbjct: 365 tctggtcaacatcacctccaagcaacttgacgtaaccaccaccgcaatcaagcttctgct 306
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| |||||||| | |||||||||||| || ||||| ||||||||||||||||||||||| |
Sbjct: 305 catgcttcaccgtgaactgcagcacgagtgtcttgtccttgttgctgaactcagggtact 246
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| || || ||||| ||||||||||| ||||| |||| || |||||||||||||| ||||
Sbjct: 245 ccgcagagatggcgtagaacctgtagtcctcagaggtttggatacctttgtcctcagcat 186
Query: 1081 ctccattccattttcccgaagtnnnnnnnnattcaccagccatgttctcatccttc 1136
|||||| ||||||||| || || ||||||||||||||||||| ||||||
Sbjct: 185 ctccatgccattttccagatgtgtggttccattcaccagccatgttctcgtccttc 130
>gb|BJ549470.1|BJ549470 BJ549470 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags35o18 5', mRNA sequence
Length = 638
Score = 268 bits (135), Expect = 4e-070
Identities = 226/257 (87%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||||||||||||||| |||||||||||||||| ||| | |||||| ||||| |||||||
Sbjct: 289 tgtacccacagatatcgggtccaaacataatgccgtagggtgtgtcgccaccgaatttct 230
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| |||||||| || ||||| |||||||| ||||| ||||| |||||||||||||
Sbjct: 229 tctggtcaacatcacctccaagcaacttgacgtaaccaccaccgcaatcaagcttctgct 170
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| |||||||| | |||||||||||| || ||||| ||||||||||||||||||||||| |
Sbjct: 169 catgcttcaccgtgaactgcagcacgagtgtcttgtccttgttgctgaactcagggtact 110
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| || || ||||| ||||||||||| ||||| |||| || |||||||||||||| ||||
Sbjct: 109 ccgcagagatggcgtagaacctgtagtcctcagaggtttggatacctttgtcctcagcat 50
Query: 1081 ctccattccattttccc 1097
|||||| ||||||||||
Sbjct: 49 ctccatgccattttccc 33
>gb|BF621650.2|BF621650 HVSMEa0011L18f Hordeum vulgare seedling shoot EST library HVcDNA0001
(Cold stress) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEa0011L18f, mRNA sequence
Length = 839
Score = 266 bits (134), Expect = 2e-069
Identities = 250/292 (85%)
Strand = Plus / Minus
Query: 845 cccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttcttctg 904
|||||||||||| |||||||||||||||| ||| | |||||| ||||| |||||||||||
Sbjct: 490 cccacagatatcgggtccaaacataatgccgtagggtgtgtcgccaccgaatttcttctg 431
Query: 905 gtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgctcgtg 964
||| |||||||| || ||||| |||||||| ||||| ||||| |||||||||||||| ||
Sbjct: 430 gtcaacatcacctccaagcaacttgacgtaaccaccaccgcaatcaagcttctgctcatg 371
Query: 965 cttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtattcggc 1024
|||||| | |||||||||||| || ||||| ||||||||||||||||||||||| || ||
Sbjct: 370 cttcaccgtgaactgcagcacgagtgtcttgtccttgttgctgaactcagggtactccgc 311
Query: 1025 tgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcatctcc 1084
|| ||||| ||||||||||| ||||| |||| || |||||||||||||| ||||||||
Sbjct: 310 agagatggcgtagaacctgtagtcctcagaggtttggatacctttgtcctcagcatctcc 251
Query: 1085 attccattttcccgaagtnnnnnnnnattcaccagccatgttctcatccttc 1136
|| ||||||||| || || ||||||||||||||||||| ||||||
Sbjct: 250 atgccattttccagatgtgtggttccattcaccagccatgttctcgtccttc 199
>gb|BG417286.1|BG417286 HVSMEk0017G08f Hordeum vulgare testa/pericarp EST library HVcDNA0013
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEk0017G08f, mRNA sequence
Length = 818
Score = 266 bits (134), Expect = 2e-069
Identities = 225/256 (87%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||||||||||||||| |||||||||||||||| ||| | |||||| ||||| |||||||
Sbjct: 315 tgtacccacagatatcgggtccaaacataatgccgtagggtgtgtcgccaccgaatttct 256
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| |||||||| || ||||| |||||||| ||||| ||||| |||||||||||||
Sbjct: 255 tctggtcaacatcacctccaagcaacttgacgtaaccaccaccgcaatcaagcttctgct 196
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| |||||||| | |||||||||||| || ||||| ||||||||||||||||||||||| |
Sbjct: 195 catgcttcaccgtgaactgcagcacgagtgtcttgtccttgttgctgaactcagggtact 136
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| || || ||||| ||||||||||| ||||| |||| || |||||||||||||| ||||
Sbjct: 135 ccgcagagatggcgtagaacctgtagtcctcagaggtttggatacctttgtcctcagcat 76
Query: 1081 ctccattccattttcc 1096
|||||| |||||||||
Sbjct: 75 ctccatgccattttcc 60
>gb|AV913228.1|AV913228 AV913228 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags21f12 5', mRNA sequence
Length = 545
Score = 266 bits (134), Expect = 2e-069
Identities = 225/256 (87%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||||||||||||||| |||||||||||||||| ||| | |||||| ||||| |||||||
Sbjct: 326 tgtacccacagatatcgggtccaaacataatgccgtagggtgtgtcgccaccgaatttct 267
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| |||||||| || ||||| |||||||| ||||| ||||| |||||||||||||
Sbjct: 266 tctggtcaacatcacctccaagcaacttgacgtaaccaccaccgcaatcaagcttctgct 207
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| |||||||| | |||||||||||| || ||||| ||||||||||||||||||||||| |
Sbjct: 206 catgcttcaccgtgaactgcagcacgagtgtcttgtccttgttgctgaactcagggtact 147
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| || || ||||| ||||||||||| ||||| |||| || |||||||||||||| ||||
Sbjct: 146 ccgcagagatggcgtagaacctgtagtcctcagaggtttggatacctttgtcctcagcat 87
Query: 1081 ctccattccattttcc 1096
|||||| |||||||||
Sbjct: 86 ctccatgccattttcc 71
>gb|AV914299.1|AV914299 AV914299 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags5j04 5', mRNA sequence
Length = 657
Score = 266 bits (134), Expect = 2e-069
Identities = 225/256 (87%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||||||||||||||| |||||||||||||||| ||| | |||||| ||||| |||||||
Sbjct: 298 tgtacccacagatatcgggtccaaacataatgccgtagggtgtgtcgccaccgaatttct 239
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| |||||||| || ||||| |||||||| ||||| ||||| |||||||||||||
Sbjct: 238 tctggtcaacatcacctccaagcaacttgacgtaaccaccaccgcaatcaagcttctgct 179
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| |||||||| | |||||||||||| || ||||| ||||||||||||||||||||||| |
Sbjct: 178 catgcttcaccgtgaactgcagcacgagtgtcttgtccttgttgctgaactcagggtact 119
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| || || ||||| ||||||||||| ||||| |||| || |||||||||||||| ||||
Sbjct: 118 ccgcagagatggcgtagaacctgtagtcctcagaggtttggatacctttgtcctcagcat 59
Query: 1081 ctccattccattttcc 1096
|||||| |||||||||
Sbjct: 58 ctccatgccattttcc 43
>gb|AV915153.1|AV915153 AV915153 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags13b18 5', mRNA sequence
Length = 631
Score = 266 bits (134), Expect = 2e-069
Identities = 225/256 (87%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||||||||||||||| |||||||||||||||| ||| | |||||| ||||| |||||||
Sbjct: 282 tgtacccacagatatcgggtccaaacataatgccgtagggtgtgtcgccaccgaatttct 223
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| |||||||| || ||||| |||||||| ||||| ||||| |||||||||||||
Sbjct: 222 tctggtcaacatcacctccaagcaacttgacgtaaccaccaccgcaatcaagcttctgct 163
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| |||||||| | |||||||||||| || ||||| ||||||||||||||||||||||| |
Sbjct: 162 catgcttcaccgtgaactgcagcacgagtgtcttgtccttgttgctgaactcagggtact 103
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| || || ||||| ||||||||||| ||||| |||| || |||||||||||||| ||||
Sbjct: 102 ccgcagagatggcgtagaacctgtagtcctcagaggtttggatacctttgtcctcagcat 43
Query: 1081 ctccattccattttcc 1096
|||||| |||||||||
Sbjct: 42 ctccatgccattttcc 27
>gb|AV915598.1|AV915598 AV915598 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags15e01 5', mRNA sequence
Length = 653
Score = 266 bits (134), Expect = 2e-069
Identities = 225/256 (87%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||||||||||||||| |||||||||||||||| ||| | |||||| ||||| |||||||
Sbjct: 302 tgtacccacagatatcgggtccaaacataatgccgtagggtgtgtcgccaccgaatttct 243
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| |||||||| || ||||| |||||||| ||||| ||||| |||||||||||||
Sbjct: 242 tctggtcaacatcacctccaagcaacttgacgtaaccaccaccgcaatcaagcttctgct 183
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| |||||||| | |||||||||||| || ||||| ||||||||||||||||||||||| |
Sbjct: 182 catgcttcaccgtgaactgcagcacgagtgtcttgtccttgttgctgaactcagggtact 123
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| || || ||||| ||||||||||| ||||| |||| || |||||||||||||| ||||
Sbjct: 122 ccgcagagatggcgtagaacctgtagtcctcagaggtttggatacctttgtcctcagcat 63
Query: 1081 ctccattccattttcc 1096
|||||| |||||||||
Sbjct: 62 ctccatgccattttcc 47
>gb|AV915875.1|AV915875 AV915875 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags16g09 5', mRNA sequence
Length = 500
Score = 266 bits (134), Expect = 2e-069
Identities = 225/256 (87%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||||||||||||||| |||||||||||||||| ||| | |||||| ||||| |||||||
Sbjct: 309 tgtacccacagatatcgggtccaaacataatgccgtagggtgtgtcgccaccgaatttct 250
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| |||||||| || ||||| |||||||| ||||| ||||| |||||||||||||
Sbjct: 249 tctggtcaacatcacctccaagcaacttgacgtaaccaccaccgcaatcaagcttctgct 190
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| |||||||| | |||||||||||| || ||||| ||||||||||||||||||||||| |
Sbjct: 189 catgcttcaccgtgaactgcagcacgagtgtcttgtccttgttgctgaactcagggtact 130
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| || || ||||| ||||||||||| ||||| |||| || |||||||||||||| ||||
Sbjct: 129 ccgcagagatggcgtagaacctgtagtcctcagaggtttggatacctttgtcctcagcat 70
Query: 1081 ctccattccattttcc 1096
|||||| |||||||||
Sbjct: 69 ctccatgccattttcc 54
>gb|BJ549290.1|BJ549290 BJ549290 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags32p16 5', mRNA sequence
Length = 633
Score = 266 bits (134), Expect = 2e-069
Identities = 225/256 (87%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||||||||||||||| |||||||||||||||| ||| | |||||| ||||| |||||||
Sbjct: 279 tgtacccacagatatcgggtccaaacataatgccgtagggtgtgtcgccaccgaatttct 220
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| |||||||| || ||||| |||||||| ||||| ||||| |||||||||||||
Sbjct: 219 tctggtcaacatcacctccaagcaacttgacgtaaccaccaccgcaatcaagcttctgct 160
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| |||||||| | |||||||||||| || ||||| ||||||||||||||||||||||| |
Sbjct: 159 catgcttcaccgtgaactgcagcacgagtgtcttgtccttgttgctgaactcagggtact 100
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| || || ||||| ||||||||||| ||||| |||| || |||||||||||||| ||||
Sbjct: 99 ccgcagagatggcgtagaacctgtagtcctcagaggtttggatacctttgtcctcagcat 40
Query: 1081 ctccattccattttcc 1096
|||||| |||||||||
Sbjct: 39 ctccatgccattttcc 24
>gb|BJ549420.1|BJ549420 BJ549420 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags34a08 5', mRNA sequence
Length = 519
Score = 266 bits (134), Expect = 2e-069
Identities = 225/256 (87%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||||||||||||||| |||||||||||||||| ||| | |||||| ||||| |||||||
Sbjct: 301 tgtacccacagatatcgggtccaaacataatgccgtagggtgtgtcgccaccgaatttct 242
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| |||||||| || ||||| |||||||| ||||| ||||| |||||||||||||
Sbjct: 241 tctggtcaacatcacctccaagcaacttgacgtaaccaccaccgcaatcaagcttctgct 182
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| |||||||| | |||||||||||| || ||||| ||||||||||||||||||||||| |
Sbjct: 181 catgcttcaccgtgaactgcagcacgagtgtcttgtccttgttgctgaactcagggtact 122
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| || || ||||| ||||||||||| ||||| |||| || |||||||||||||| ||||
Sbjct: 121 ccgcagagatggcgtagaacctgtagtcctcagaggtttggatacctttgtcctcagcat 62
Query: 1081 ctccattccattttcc 1096
|||||| |||||||||
Sbjct: 61 ctccatgccattttcc 46
>gb|BJ549593.1|BJ549593 BJ549593 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags39o09 5', mRNA sequence
Length = 684
Score = 266 bits (134), Expect = 2e-069
Identities = 225/256 (87%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||||||||||||||| |||||||||||||||| ||| | |||||| ||||| |||||||
Sbjct: 314 tgtacccacagatatcgggtccaaacataatgccgtagggtgtgtcgccaccgaatttct 255
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| |||||||| || ||||| |||||||| ||||| ||||| |||||||||||||
Sbjct: 254 tctggtcaacatcacctccaagcaacttgacgtaaccaccaccgcaatcaagcttctgct 195
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| |||||||| | |||||||||||| || ||||| ||||||||||||||||||||||| |
Sbjct: 194 catgcttcaccgtgaactgcagcacgagtgtcttgtccttgttgctgaactcagggtact 135
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| || || ||||| ||||||||||| ||||| |||| || |||||||||||||| ||||
Sbjct: 134 ccgcagagatggcgtagaacctgtagtcctcagaggtttggatacctttgtcctcagcat 75
Query: 1081 ctccattccattttcc 1096
|||||| |||||||||
Sbjct: 74 ctccatgccattttcc 59
>gb|AV915883.1|AV915883 AV915883 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags16h09 5', mRNA sequence
Length = 309
Score = 262 bits (132), Expect = 2e-068
Identities = 252/296 (85%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||||||||||||||| |||||||||||||| | ||| | |||||| || || ||||| |
Sbjct: 301 tgtacccacagatatcgggtccaaacataatnccgtagggtgtgtcgccnccgaatttat 242
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| |||||||| || ||||| |||||||| ||||||||||| |||||||||||||
Sbjct: 241 tctggtcaacatcacctccaagcaacttgacgtaaccaccgccgcaatcaagcttctgct 182
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| |||||||| | |||||||||||| || ||||| ||||||||||||||||||||||| |
Sbjct: 181 catgcttcaccgtgaactgcagcacgagtgtcttgtccttgttgctgaactcagggtact 122
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| || || ||||| ||||||||||| ||||| |||| || |||||||||||||| ||||
Sbjct: 121 ccgcagagatggcgtagaacctgtagtcctcagaggtttggatacctttgtcctcagcat 62
Query: 1081 ctccattccattttcccgaagtnnnnnnnnattcaccagccatgttctcatccttc 1136
|||||| ||||||||| || || ||||||||||||||||||| ||||||
Sbjct: 61 ctccatgccattttccagatgtgtggttccattcaccagccatgttctcgtccttc 6
>gb|BG299310.1|BG299310 HVSMEa0019F14f Hordeum vulgare seedling shoot EST library HVcDNA0001
(Cold stress) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEa0019F14f, mRNA sequence
Length = 641
Score = 250 bits (126), Expect = 9e-065
Identities = 247/291 (84%)
Strand = Plus / Minus
Query: 846 ccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttcttctgg 905
||||||||||| |||||||||||||||| ||| | |||||| ||||| |||||| |||||
Sbjct: 487 ccacagatatcgggtccaaacataatgccgtagggtgtgtcgccaccgaatttcntctgg 428
Query: 906 tctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgctcgtgc 965
|| |||||||| || ||||| |||||||| ||||| ||||| |||||||||||||| |||
Sbjct: 427 tcaacatcacctccaagcaacttgacgtaaccaccaccgcaatcaagcttctgctcatgc 368
Query: 966 ttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtattcggct 1025
||||| | |||||||||||| || ||||| |||||| |||||||||||||||| || ||
Sbjct: 367 ttcaccgtgaactgcagcacgagtgtcttgtccttggtgctgaactcagggtactccgca 308
Query: 1026 gaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcatctcca 1085
|| ||||| ||||||||||| ||||| |||| || |||||||||||||| |||||||||
Sbjct: 307 gagatggcgtagaacctgtagtcctcagaggtttggatacctttgtcctcagcatctcca 248
Query: 1086 ttccattttcccgaagtnnnnnnnnattcaccagccatgttctcatccttc 1136
| ||||||||| || || ||||||||||||||||||| ||||||
Sbjct: 247 tgccattttccagatgtgtggttccattcaccagccatgttctcgtccttc 197
>gb|BQ761078.1|BQ761078 EBro04_SQ003_L24_R root, 3 week, salt-stressed, cv Optic, EBro04
Hordeum vulgare subsp. vulgare cDNA clone
EBro04_SQ003_L24 5', mRNA sequence
Length = 605
Score = 236 bits (119), Expect = 1e-060
Identities = 223/257 (86%), Gaps = 1/257 (0%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||||||||||||||| |||||||||||||||||||| | |||||| |||| ||||| |
Sbjct: 518 tgtacccacagatatcgggtccaaacataatgctgtagggtgtgtcgccactcaatttgt 459
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| |||||||| || ||||| |||||||| ||||| |||||||||||||| ||||
Sbjct: 458 tctggtcaacatcacctccaagcaacttgacgtaaccacctccgcagtcaagcttgtgct 399
Query: 961 cgtgcttcacagaga-actgcagcaccagggtcttatccttgttgctgaactcagggtat 1019
| |||||||| | || |||||||||| || ||||| |||||||||||||||||||||||
Sbjct: 398 catgcttcaccgtgacactgcagcacgagtgtcttgtccttgttgctgaactcagggtac 339
Query: 1020 tcggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggca 1079
|| || || ||||| ||||||||||| || || |||| || |||||||||||||| |||
Sbjct: 338 tccgccgagatggcgtagaacctgtagtcttcagaggtttggatacctttgtcctcagca 279
Query: 1080 tctccattccattttcc 1096
||||||| |||||||||
Sbjct: 278 tctccatgccattttcc 262
>gb|BI954494.1|BI954494 HVSMEm0018E04f Hordeum vulgare green seedling EST library HVcDNA0014
(Blumeria infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEm0018E04f, mRNA sequence
Length = 667
Score = 232 bits (117), Expect = 2e-059
Identities = 236/279 (84%)
Strand = Plus / Minus
Query: 858 ggtccaaacataatgctgtaagatgtgtctccaccaaatttcttctggtctacatcacca 917
|||||||||||||||| ||| | |||||| ||||| | | |||||||||| ||||||||
Sbjct: 480 ggtccaaacataatgccgtagggtgtgtcgccaccgattatcttctggtcaacatcacct 421
Query: 918 cccagcaatttgacgtagccaccgccgcagtcaagcttctgctcgtgcttcacagagaac 977
|| ||||| |||||||| ||||| ||||| |||||||||||||| |||||||| | ||||
Sbjct: 420 ccaagcaacttgacgtaaccaccaccgcaatcaagcttctgctcatgcttcaccgtgaac 361
Query: 978 tgcagcaccagggtcttatccttgttgctgaactcagggtattcggctgaaatggcatag 1037
|||||||| || ||||| ||||||||||||||||||||||| || || || ||||| |||
Sbjct: 360 tgcagcacgagtgtcttgtccttgttgctgaactcagggtactccgcagagatggcgtag 301
Query: 1038 aacctgtaatcctcggaggnntgaatacctttgtcctcggcatctccattccattttccc 1097
|||||||| ||||| |||| || |||||||||||||| |||||||||| |||||||||
Sbjct: 300 aacctgtagtcctcagaggtttggatacctttgtcctcagcatctccatgccattttcca 241
Query: 1098 gaagtnnnnnnnnattcaccagccatgttctcatccttc 1136
|| || ||||||||||||||||||| ||||||
Sbjct: 240 gatgtgtggttccattcaccagccatgttctcgtccttc 202
>gb|BM377784.2|BM377784 EBem04_SQ004_C16_R embryo, 12 DPA, no treatment, cv Optic, EBem04
Hordeum vulgare subsp. vulgare cDNA clone
EBem04_SQ004_C16 5', mRNA sequence
Length = 481
Score = 228 bits (115), Expect = 3e-058
Identities = 215/249 (86%)
Strand = Plus / Minus
Query: 848 acagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttcttctggtc 907
||||| ||| |||||||||||||||||||| | |||||| ||||| | ||||||||||||
Sbjct: 481 acagagatcgggtccaaacataatgctgtagggtgtgtcgccaccgactttcttctggtc 422
Query: 908 tacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgctcgtgctt 967
|||||||| || ||||| |||||||| ||||| |||||||||||||| ||||| |||||
Sbjct: 421 aacatcacctccaagcaacttgacgtaaccaccaccgcagtcaagcttatgctcatgctt 362
Query: 968 cacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtattcggctga 1027
||| | |||||||||||| || ||||| |||||| |||||||||||||||| || || ||
Sbjct: 361 caccgtgaactgcagcacgagtgtcttgtccttgatgctgaactcagggtactccgccga 302
Query: 1028 aatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcatctccatt 1087
||||| ||||||||||| ||||| |||| || |||||| ||||||| ||||||||||
Sbjct: 301 gatggcgtagaacctgtagtcctcagaggtttggatacctatgtcctcagcatctccatg 242
Query: 1088 ccattttcc 1096
|||||||||
Sbjct: 241 ccattttcc 233
>gb|BE558911.2|BE558911 HV_CEb0020M02f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0020M02f, mRNA sequence
Length = 793
Score = 226 bits (114), Expect = 1e-057
Identities = 190/216 (87%)
Strand = Plus / Minus
Query: 881 tgtgtctccaccaaatttcttctggtctacatcaccacccagcaatttgacgtagccacc 940
|||||| ||||| |||||||||||||| |||||||| || ||||| |||||||| |||||
Sbjct: 450 tgtgtcgccaccgaatttcttctggtcaacatcacctccaagcaacttgacgtaaccacc 391
Query: 941 gccgcagtcaagcttctgctcgtgcttcacagagaactgcagcaccagggtcttatcctt 1000
|||||||||||||||||||| |||||||| | |||||||||||| || ||||| |||||
Sbjct: 390 accgcagtcaagcttctgctcatgcttcaccgtgaactgcagcacgagtgtcttgtcctt 331
Query: 1001 gttgctgaactcagggtattcggctgaaatggcatagaacctgtaatcctcggaggnntg 1060
|||||||||||||||||| || || || ||||| ||||||||||| ||||| |||| ||
Sbjct: 330 gttgctgaactcagggtactccgccgagatggcgtagaacctgtagtcctcagaggtttg 271
Query: 1061 aatacctttgtcctcggcatctccattccattttcc 1096
|||||||||||||| |||||||||| |||||||||
Sbjct: 270 gatacctttgtcctcagcatctccatgccattttcc 235
Score = 65.9 bits (33), Expect = 3e-009
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgta 877
|||||||||||||||| ||||||||||||||||||||
Sbjct: 569 tgtacccacagatatcgggtccaaacataatgctgta 533
>gb|BJ549145.1|BJ549145 BJ549145 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags24e13 5', mRNA sequence
Length = 596
Score = 220 bits (111), Expect = 8e-056
Identities = 186/211 (88%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||||||||||||||| |||||||||||||||| ||| | |||||| ||||| |||||||
Sbjct: 214 tgtacccacagatatcgggtccaaacataatgccgtagggtgtgtcgccaccgaatttct 155
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| |||||||| || ||||| |||||||| ||||| ||||| |||||||||||||
Sbjct: 154 tctggtcaacatcacctccaagcaacttgacgtaaccaccaccgcaatcaagcttctgct 95
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| |||||||| | |||||||||||| || ||||| ||||||||||||||||||||||| |
Sbjct: 94 catgcttcaccgtgaactgcagcacgagtgtcttgtccttgttgctgaactcagggtact 35
Query: 1021 cggctgaaatggcatagaacctgtaatcctc 1051
| || || ||||| ||||||||||| |||||
Sbjct: 34 ccgcagagatggcgtagaacctgtagtcctc 4
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 112,199
Number of Sequences: 312970
Number of extensions: 112199
Number of successful extensions: 31765
Number of sequences better than 0.5: 75
Number of HSP's better than 0.5 without gapping: 75
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 31624
Number of HSP's gapped (non-prelim): 139
length of query: 1238
length of database: 175,134,539
effective HSP length: 19
effective length of query: 1219
effective length of database: 169,188,109
effective search space: 206240304871
effective search space used: 206240304871
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)