BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.593
(1027 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BE602548.3|BE602548 HVSMEh0099N16f Hordeum vulgare 5-45 ... 88 7e-016
gb|BF621706.2|BF621706 HVSMEa0011P10f Hordeum vulgare seedl... 86 3e-015
gb|BI950473.1|BI950473 HVSMEl0020N22f Hordeum vulgare spike... 86 3e-015
gb|BI953201.1|BI953201 HVSMEm0011K01f Hordeum vulgare green... 86 3e-015
gb|BI954227.1|BI954227 HVSMEm0016L11f Hordeum vulgare green... 86 3e-015
gb|BI955968.1|BI955968 HVSMEm0025D17f Hordeum vulgare green... 86 3e-015
gb|BF064990.1|BF064990 HV_CEb0022F13f Hordeum vulgare seedl... 86 3e-015
gb|BF265978.2|BF265978 HV_CEa0013N09f Hordeum vulgare seedl... 86 3e-015
gb|BE214577.2|BE214577 HV_CEb0003N19f Hordeum vulgare seedl... 86 3e-015
gb|BF065377.2|BF065377 HV_CEb0012E08f Hordeum vulgare seedl... 86 3e-015
gb|BE559387.2|BE559387 HV_CEb0024H02f Hordeum vulgare seedl... 86 3e-015
gb|CA003742.1|CA003742 HS15G18r HS Hordeum vulgare subsp. v... 86 3e-015
gb|CA019311.1|CA019311 HV11J14r HV Hordeum vulgare subsp. v... 86 3e-015
gb|BJ544278.1|BJ544278 BJ544278 K. Sato unpublished cDNA li... 86 3e-015
gb|BJ544690.1|BJ544690 BJ544690 K. Sato unpublished cDNA li... 86 3e-015
gb|BJ544954.1|BJ544954 BJ544954 K. Sato unpublished cDNA li... 86 3e-015
gb|BJ545180.1|BJ545180 BJ545180 K. Sato unpublished cDNA li... 86 3e-015
gb|CB878161.1|CB878161 HP07J01T HP Hordeum vulgare subsp. v... 86 3e-015
emb|X78672.1|HVCHT2B H.vulgare mRNA for chitinase 2b 86 3e-015
gb|BE454845.1|BE454845 HVSMEh0095E05f Hordeum vulgare 5-45 ... 84 1e-014
gb|BG365536.1|BG365536 HVSMEi0003B22f Hordeum vulgare 20 DA... 84 1e-014
gb|BI949025.1|BI949025 HVSMEl0012B07f Hordeum vulgare spike... 84 1e-014
gb|BI950475.1|BI950475 HVSMEl0020N24f Hordeum vulgare spike... 84 1e-014
gb|BG414755.1|BG414755 HVSMEk0003J19f Hordeum vulgare testa... 84 1e-014
gb|BG415203.1|BG415203 HVSMEk0005I16f Hordeum vulgare testa... 84 1e-014
gb|BG416746.1|BG416746 HVSMEk0014F08f Hordeum vulgare testa... 84 1e-014
gb|BG417971.1|BG417971 HVSMEk0020F20f Hordeum vulgare testa... 84 1e-014
gb|BE454492.3|BE454492 HVSMEh0094A02f Hordeum vulgare 5-45 ... 84 1e-014
gb|BE602672.2|BE602672 HVSMEh0101A21f Hordeum vulgare 5-45 ... 84 1e-014
gb|BG365634.2|BG365634 HVSMEi0003I02f Hordeum vulgare 20 DA... 84 1e-014
gb|BG369358.2|BG369358 HVSMEi0024B14f Hordeum vulgare 20 DA... 84 1e-014
gb|BG418257.2|BG418257 HVSMEk0022B19f Hordeum vulgare testa... 84 1e-014
gb|BE411224.1|BE411224 ISC003.D02F990524 ITEC ISC Barley Le... 80 2e-013
gb|BE411672.1|BE411672 ISC008.A09F990802 ITEC ISC Barley Le... 80 2e-013
gb|BF064981.3|BF064981 HV_CEb0022E17f Hordeum vulgare seedl... 80 2e-013
gb|AV926184.1|AV926184 AV926184 K. Sato unpublished cDNA li... 80 2e-013
gb|AV926193.1|AV926193 AV926193 K. Sato unpublished cDNA li... 80 2e-013
gb|AV926194.1|AV926194 AV926194 K. Sato unpublished cDNA li... 80 2e-013
gb|AV931065.1|AV931065 AV931065 K. Sato unpublished cDNA li... 80 2e-013
gb|AV933330.1|AV933330 AV933330 K. Sato unpublished cDNA li... 80 2e-013
gb|AV933371.1|AV933371 AV933371 K. Sato unpublished cDNA li... 80 2e-013
gb|AV933383.1|AV933383 AV933383 K. Sato unpublished cDNA li... 80 2e-013
gb|AV935770.1|AV935770 AV935770 K. Sato unpublished cDNA li... 80 2e-013
gb|AV935813.1|AV935813 AV935813 K. Sato unpublished cDNA li... 80 2e-013
gb|BJ469713.1|BJ469713 BJ469713 K. Sato unpublished cDNA li... 80 2e-013
gb|BJ476805.1|BJ476805 BJ476805 K. Sato unpublished cDNA li... 80 2e-013
gb|BM372933.2|BM372933 EBma04_SQ002_H02_R maternal, 10 DPA,... 80 2e-013
gb|CA022080.1|CA022080 HZ42B20r HZ Hordeum vulgare subsp. v... 80 2e-013
gb|CA026694.1|CA026694 HZ56K16r HZ Hordeum vulgare subsp. v... 80 2e-013
gb|BJ546657.1|BJ546657 BJ546657 K. Sato unpublished cDNA li... 80 2e-013
gb|CB858429.1|CB858429 HI06P17w HI Hordeum vulgare subsp. v... 80 2e-013
gb|CB877034.1|CB877034 HP03F07T HP Hordeum vulgare subsp. v... 80 2e-013
gb|CB879697.1|CB879697 HP03F07w HP Hordeum vulgare subsp. v... 80 2e-013
gb|CD663592.1|CD663592 UCRHV18_06aa04_b1 Drought-stressed D... 80 2e-013
gb|BI947443.1|BI947443 HVSMEl0005H24f Hordeum vulgare spike... 78 6e-013
gb|BE454366.3|BE454366 HVSMEh0093N17f Hordeum vulgare 5-45 ... 78 6e-013
gb|BG414551.2|BG414551 HVSMEk0002N14f Hordeum vulgare testa... 78 6e-013
gb|AV925874.1|AV925874 AV925874 K. Sato unpublished cDNA li... 78 6e-013
gb|BI948372.1|BI948372 HVSMEl0009E13f Hordeum vulgare spike... 76 3e-012
gb|BE455238.3|BE455238 HVSMEh0096L08f Hordeum vulgare 5-45 ... 76 3e-012
gb|BJ449472.1|BJ449472 BJ449472 K. Sato unpublished cDNA li... 76 3e-012
gb|BJ459432.1|BJ459432 BJ459432 K. Sato unpublished cDNA li... 76 3e-012
gb|BQ465942.1|BQ465942 HT01C02T HT Hordeum vulgare subsp. v... 76 3e-012
gb|BQ466541.1|BQ466541 HT02N08r HT Hordeum vulgare subsp. v... 76 3e-012
gb|BM441867.2|BM441867 EBed07_SQ001_M10_R endosperm, 28 DPA... 76 3e-012
gb|BI780034.2|BI780034 EBma08_SQ001_D14_R maternal, 28 DPA,... 76 3e-012
gb|BM096890.2|BM096890 EBma08_SQ001_O17_R maternal, 28 DPA,... 76 3e-012
gb|BM371442.2|BM371442 EBma08_SQ002_M02_R maternal, 28 DPA,... 76 3e-012
gb|BM371550.2|BM371550 EBma08_SQ003_C16_R maternal, 28 DPA,... 76 3e-012
gb|BM371924.2|BM371924 EBma08_SQ004_G15_R maternal, 28 DPA,... 76 3e-012
gb|BQ755807.1|BQ755807 EBed07_SQ003_N15_R endosperm, 28 DPA... 76 3e-012
gb|BU984341.1|BU984341 HF03K16r HF Hordeum vulgare subsp. v... 76 3e-012
gb|BU988906.1|BU988906 HF19B23r HF Hordeum vulgare subsp. v... 76 3e-012
gb|CA012187.1|CA012187 HT04K16r HT Hordeum vulgare subsp. v... 76 3e-012
gb|CA013184.1|CA013184 HT07K10r HT Hordeum vulgare subsp. v... 76 3e-012
gb|CA013444.1|CA013444 HT08H14r HT Hordeum vulgare subsp. v... 76 3e-012
gb|CA014196.1|CA014196 HT10K16r HT Hordeum vulgare subsp. v... 76 3e-012
gb|CA022259.1|CA022259 HZ42J20r HZ Hordeum vulgare subsp. v... 76 3e-012
gb|BE422349.1|BE422349 HWM023cB.11r ITEC HWM Barley Leaf Li... 74 1e-011
gb|BI946904.1|BI946904 HVSMEl0002L21f Hordeum vulgare spike... 74 1e-011
gb|AV935825.1|AV935825 AV935825 K. Sato unpublished cDNA li... 74 1e-011
gb|BQ659497.1|BQ659497 HE01J14u HE Hordeum vulgare subsp. v... 74 1e-011
gb|AL499683.1|AL499683 AL499683 Hordeum vulgare Barke etiol... 72 4e-011
gb|AL500402.1|AL500402 AL500402 Hordeum vulgare Barke etiol... 72 4e-011
gb|BI949249.1|BI949249 HVSMEl0013A02f Hordeum vulgare spike... 72 4e-011
gb|BI951414.1|BI951414 HVSMEl0025N19f Hordeum vulgare spike... 72 4e-011
gb|BI951463.1|BI951463 HVSMEm0001A11f Hordeum vulgare green... 72 4e-011
gb|BI952917.1|BI952917 HVSMEm0008F23f Hordeum vulgare green... 72 4e-011
gb|BI953910.1|BI953910 HVSMEm0015F08f Hordeum vulgare green... 72 4e-011
gb|BI955638.1|BI955638 HVSMEm0023N21f Hordeum vulgare green... 72 4e-011
gb|BE214283.1|BE214283 HV_CEb0003A01f Hordeum vulgare seedl... 72 4e-011
gb|BE216024.1|BE216024 HV_CEb0009C12f Hordeum vulgare seedl... 72 4e-011
gb|BF066058.1|BF066058 HV_CEb0014L16f Hordeum vulgare seedl... 72 4e-011
gb|BF265236.1|BF265236 HV_CEa0011O17f Hordeum vulgare seedl... 72 4e-011
gb|BF065694.2|BF065694 HV_CEb0013H08f Hordeum vulgare seedl... 72 4e-011
gb|BG417744.1|BG417744 HVSMEk0019F09f Hordeum vulgare testa... 72 4e-011
gb|BF262973.2|BF262973 HV_CEa0005H11f Hordeum vulgare seedl... 72 4e-011
gb|BE215473.3|BE215473 HV_CEb0006O09f Hordeum vulgare seedl... 72 4e-011
gb|BF065825.3|BF065825 HV_CEb0014B14f Hordeum vulgare seedl... 72 4e-011
gb|BM444141.1|BM444141 EBem09_SQ004_E15_R embryo, 1 Day ger... 72 4e-011
gb|BI780166.2|BI780166 EBma08_SQ001_J11_R maternal, 28 DPA,... 72 4e-011
gb|CB879149.1|CB879149 HP11B19T HP Hordeum vulgare subsp. v... 72 4e-011
emb|X78671.1|HVCHT2A H.vulgare mRNA for chitinase 2a 72 4e-011
gb|BG366386.2|BG366386 HVSMEi0006N24f Hordeum vulgare 20 DA... 70 2e-010
gb|BF265189.3|BF265189 HV_CEa0011I10f Hordeum vulgare seedl... 70 2e-010
gb|BI947511.1|BI947511 HVSMEl0005L16f Hordeum vulgare spike... 68 6e-010
gb|AV931076.1|AV931076 AV931076 K. Sato unpublished cDNA li... 68 6e-010
gb|BF257510.3|BF257510 HVSMEf0013B19f Hordeum vulgare seedl... 66 2e-009
gb|BG369588.2|BG369588 HVSMEi0025B12f Hordeum vulgare 20 DA... 66 2e-009
gb|BJ543978.1|BJ543978 BJ543978 K. Sato unpublished cDNA li... 66 2e-009
gb|BJ544774.1|BJ544774 BJ544774 K. Sato unpublished cDNA li... 66 2e-009
gb|BE195941.2|BE195941 HVSMEh0090O16f Hordeum vulgare 5-45 ... 64 1e-008
gb|BI955596.1|BI955596 HVSMEm0023L14f Hordeum vulgare green... 64 1e-008
gb|BE559371.1|BE559371 HV_CEb0024F08f Hordeum vulgare seedl... 64 1e-008
gb|BF065067.1|BF065067 HV_CEb0022N01f Hordeum vulgare seedl... 64 1e-008
gb|BF264498.2|BF264498 HV_CEa0009J09f Hordeum vulgare seedl... 64 1e-008
gb|BF266125.2|BF266125 HV_CEa0014D24f Hordeum vulgare seedl... 64 1e-008
gb|AV924171.1|AV924171 AV924171 K. Sato unpublished cDNA li... 64 1e-008
gb|BJ544300.1|BJ544300 BJ544300 K. Sato unpublished cDNA li... 64 1e-008
gb|BJ546437.1|BJ546437 BJ546437 K. Sato unpublished cDNA li... 64 1e-008
emb|AJ276226.1|HVU276226 Hordeum vulgare mRNA for chitinase... 64 1e-008
gb|BF628657.2|BF628657 HVSMEb0006P01f Hordeum vulgare seedl... 62 4e-008
gb|CA009849.1|CA009849 HT12N24u HT Hordeum vulgare subsp. v... 62 4e-008
gb|AL450510.1|AL450510 AL450510 Hordeum vulgare Barke etiol... 60 2e-007
gb|BG365326.1|BG365326 HVSMEi0002E22f Hordeum vulgare 20 DA... 58 6e-007
gb|BF624096.2|BF624096 HVSMEa0009G20f Hordeum vulgare seedl... 56 2e-006
gb|BE195290.2|BE195290 HVSMEh0088N04f Hordeum vulgare 5-45 ... 56 2e-006
gb|BG365987.1|BG365987 HVSMEi0005K09f Hordeum vulgare 20 DA... 56 2e-006
gb|BG366443.1|BG366443 HVSMEi0007B04f Hordeum vulgare 20 DA... 56 2e-006
gb|BG366444.1|BG366444 HVSMEi0007B06f Hordeum vulgare 20 DA... 56 2e-006
gb|BG366514.1|BG366514 HVSMEi0007F02f Hordeum vulgare 20 DA... 56 2e-006
gb|BG368439.1|BG368439 HVSMEi0018M10f Hordeum vulgare 20 DA... 56 2e-006
gb|BG369819.1|BG369819 HVSMEi0026C13f Hordeum vulgare 20 DA... 56 2e-006
gb|BI952125.1|BI952125 HVSMEm0004L07f Hordeum vulgare green... 56 2e-006
gb|BI954355.1|BI954355 HVSMEm0017G10f Hordeum vulgare green... 56 2e-006
gb|BE214483.2|BE214483 HV_CEb0003J11f Hordeum vulgare seedl... 56 2e-006
gb|BG415850.1|BG415850 HVSMEk0008C15f Hordeum vulgare testa... 56 2e-006
gb|BG301220.2|BG301220 HVSMEb0019P18f Hordeum vulgare seedl... 56 2e-006
gb|BE196066.3|BE196066 HVSMEh0091E09f Hordeum vulgare 5-45 ... 56 2e-006
gb|BE602137.3|BE602137 HVSMEh0102K15f Hordeum vulgare 5-45 ... 56 2e-006
gb|BG365564.2|BG365564 HVSMEi0003D14f Hordeum vulgare 20 DA... 56 2e-006
gb|BG365745.2|BG365745 HVSMEi0004A12f Hordeum vulgare 20 DA... 56 2e-006
gb|BG366294.2|BG366294 HVSMEi0006J18f Hordeum vulgare 20 DA... 56 2e-006
gb|BG366607.2|BG366607 HVSMEi0007J19f Hordeum vulgare 20 DA... 56 2e-006
gb|AV908859.1|AV908859 AV908859 K. Sato unpublished cDNA li... 56 2e-006
gb|AV909683.1|AV909683 AV909683 K. Sato unpublished cDNA li... 56 2e-006
gb|AV911582.1|AV911582 AV911582 K. Sato unpublished cDNA li... 56 2e-006
gb|AV928645.1|AV928645 AV928645 K. Sato unpublished cDNA li... 56 2e-006
gb|AV929266.1|AV929266 AV929266 K. Sato unpublished cDNA li... 56 2e-006
gb|BQ757610.1|BQ757610 EBem10_SQ004_K15_R embryo, 2 Day ger... 56 2e-006
gb|BJ544721.1|BJ544721 BJ544721 K. Sato unpublished cDNA li... 56 2e-006
gb|BJ545740.1|BJ545740 BJ545740 K. Sato unpublished cDNA li... 56 2e-006
gb|BJ546018.1|BJ546018 BJ546018 K. Sato unpublished cDNA li... 56 2e-006
gb|BJ546165.1|BJ546165 BJ546165 K. Sato unpublished cDNA li... 56 2e-006
gb|BJ546197.1|BJ546197 BJ546197 K. Sato unpublished cDNA li... 56 2e-006
gb|BJ546246.1|BJ546246 BJ546246 K. Sato unpublished cDNA li... 56 2e-006
gb|BJ546257.1|BJ546257 BJ546257 K. Sato unpublished cDNA li... 56 2e-006
gb|BG365887.1|BG365887 HVSMEi0004K07f Hordeum vulgare 20 DA... 54 9e-006
gb|BG368852.1|BG368852 HVSMEi0020P03f Hordeum vulgare 20 DA... 54 9e-006
gb|BI946596.1|BI946596 HVSMEl0001A13f Hordeum vulgare spike... 54 9e-006
gb|BI949464.1|BI949464 HVSMEl0014A17f Hordeum vulgare spike... 54 9e-006
gb|BG365415.2|BG365415 HVSMEi0002J15f Hordeum vulgare 20 DA... 54 9e-006
gb|BG365857.2|BG365857 HVSMEi0004I09f Hordeum vulgare 20 DA... 54 9e-006
gb|BG368640.2|BG368640 HVSMEi0020A24f Hordeum vulgare 20 DA... 54 9e-006
gb|BG369545.2|BG369545 HVSMEi0024N21f Hordeum vulgare 20 DA... 54 9e-006
gb|BI780179.2|BI780179 EBma08_SQ001_K01_R maternal, 28 DPA,... 54 9e-006
gb|BM371530.2|BM371530 EBma08_SQ003_B11_R maternal, 28 DPA,... 54 9e-006
gb|BM371568.2|BM371568 EBma08_SQ003_D15_R maternal, 28 DPA,... 54 9e-006
gb|BQ758640.1|BQ758640 EBma07_SQ002_J07_R maternal, 21 DPA,... 54 9e-006
gb|CA012410.1|CA012410 HT05F17r HT Hordeum vulgare subsp. v... 54 9e-006
gb|CA014966.1|CA014966 HT12N24r HT Hordeum vulgare subsp. v... 54 9e-006
gb|CA015187.1|CA015187 HT13I21r HT Hordeum vulgare subsp. v... 54 9e-006
gb|CA018351.1|CA018351 HV08G01r HV Hordeum vulgare subsp. v... 54 9e-006
gb|U02287.1|HVU02287 Hordeum vulgare cultivar NK1558 chitin... 54 9e-006
emb|AJ400137.1|HVU400137 Hordeum vulgare subsp. vulgare par... 54 9e-006
gb|BE601801.2|BE601801 HVSMEh0099J11f Hordeum vulgare 5-45 ... 52 4e-005
gb|BG368322.1|BG368322 HVSMEi0017L06f Hordeum vulgare 20 DA... 52 4e-005
gb|BF259671.3|BF259671 HVSMEf0019P07f Hordeum vulgare seedl... 52 4e-005
gb|BE195244.3|BE195244 HVSMEh0088K24f Hordeum vulgare 5-45 ... 52 4e-005
gb|BG368219.2|BG368219 HVSMEi0016L15f Hordeum vulgare 20 DA... 52 4e-005
gb|AV908961.1|AV908961 AV908961 K. Sato unpublished cDNA li... 52 4e-005
gb|AV910846.1|AV910846 AV910846 K. Sato unpublished cDNA li... 52 4e-005
gb|BJ449314.1|BJ449314 BJ449314 K. Sato unpublished cDNA li... 52 4e-005
gb|BJ453540.1|BJ453540 BJ453540 K. Sato unpublished cDNA li... 52 4e-005
gb|BJ456780.1|BJ456780 BJ456780 K. Sato unpublished cDNA li... 52 4e-005
gb|BJ461085.1|BJ461085 BJ461085 K. Sato unpublished cDNA li... 52 4e-005
gb|BJ544555.1|BJ544555 BJ544555 K. Sato unpublished cDNA li... 52 4e-005
gb|CB876675.1|CB876675 HP02A05T HP Hordeum vulgare subsp. v... 52 4e-005
gb|BM444668.1|BM444668 EBem09_SQ006_C06_R embryo, 1 Day ger... 50 1e-004
gb|BM371738.2|BM371738 EBma08_SQ003_M12_R maternal, 28 DPA,... 50 1e-004
gb|BQ758652.1|BQ758652 EBma07_SQ002_L09_R maternal, 21 DPA,... 50 1e-004
gb|BF259800.2|BF259800 HVSMEf0020E19f Hordeum vulgare seedl... 48 6e-004
gb|BE602375.2|BE602375 HVSMEh0098L01f Hordeum vulgare 5-45 ... 48 6e-004
gb|BG366254.1|BG366254 HVSMEi0006G16f Hordeum vulgare 20 DA... 48 6e-004
gb|BE215793.1|BE215793 HV_CEb0008I03f Hordeum vulgare seedl... 48 6e-004
gb|BG365754.2|BG365754 HVSMEi0004B04f Hordeum vulgare 20 DA... 48 6e-004
gb|BG369253.2|BG369253 HVSMEi0023G17f Hordeum vulgare 20 DA... 48 6e-004
gb|BE214365.3|BE214365 HV_CEb0003D21f Hordeum vulgare seedl... 48 6e-004
gb|BQ755243.1|BQ755243 EBed07_SQ002_G06_R endosperm, 28 DPA... 48 6e-004
gb|BQ755873.1|BQ755873 EBed07_SQ003_G24_R endosperm, 28 DPA... 48 6e-004
gb|BG365956.1|BG365956 HVSMEi0005I01f Hordeum vulgare 20 DA... 46 0.002
gb|BI954922.1|BI954922 HVSMEm0020H05f Hordeum vulgare green... 46 0.002
gb|BE193259.3|BE193259 HVSMEh0080F13f Hordeum vulgare 5-45 ... 46 0.002
gb|BG366793.2|BG366793 HVSMEi0008F20f Hordeum vulgare 20 DA... 46 0.002
gb|BG368641.2|BG368641 HVSMEi0020B02f Hordeum vulgare 20 DA... 46 0.002
gb|BG369571.2|BG369571 HVSMEi0024P21f Hordeum vulgare 20 DA... 46 0.002
gb|BE454981.1|BE454981 HVSMEh0095L21f Hordeum vulgare 5-45 ... 44 0.009
gb|BF620099.2|BF620099 HVSMEc0011P11f Hordeum vulgare seedl... 44 0.009
gb|BG367072.1|BG367072 HVSMEi0010B13f Hordeum vulgare 20 DA... 44 0.009
gb|BG368854.1|BG368854 HVSMEi0020P07f Hordeum vulgare 20 DA... 44 0.009
gb|BI947731.1|BI947731 HVSMEl0006K11f Hordeum vulgare spike... 44 0.009
gb|BE196188.3|BE196188 HVSMEh0091J17f Hordeum vulgare 5-45 ... 44 0.009
gb|BG367233.2|BG367233 HVSMEi0011G09f Hordeum vulgare 20 DA... 44 0.009
gb|BG367660.2|BG367660 HVSMEi0013B21f Hordeum vulgare 20 DA... 44 0.009
gb|BG369058.2|BG369058 HVSMEi0021J04f Hordeum vulgare 20 DA... 44 0.009
gb|BM371518.2|BM371518 EBma08_SQ003_A17_R maternal, 28 DPA,... 44 0.009
gb|BM371743.2|BM371743 EBma08_SQ003_M18_R maternal, 28 DPA,... 44 0.009
gb|CA011984.1|CA011984 HT04B14r HT Hordeum vulgare subsp. v... 44 0.009
gb|CA019044.1|CA019044 HV10J02r HV Hordeum vulgare subsp. v... 44 0.009
gb|BF623602.2|BF623602 HVSMEa0002P13f Hordeum vulgare seedl... 42 0.036
gb|BF624146.2|BF624146 HVSMEa0012B06f Hordeum vulgare seedl... 42 0.036
gb|BG299450.2|BG299450 HVSMEa0020B12f Hordeum vulgare seedl... 42 0.036
gb|BF619746.2|BF619746 HVSMEc0009B09f Hordeum vulgare seedl... 42 0.036
gb|BE455567.3|BE455567 HVSMEg0017N15f Hordeum vulgare pre-a... 42 0.036
gb|BG367092.2|BG367092 HVSMEi0010E09f Hordeum vulgare 20 DA... 42 0.036
gb|BM368822.1|BM368822 EBem08_SQ004_L06_R embryo, 40 DPA, n... 42 0.036
gb|BM372862.1|BM372862 EBma04_SQ002_D08_R maternal, 10 DPA,... 42 0.036
gb|BQ662085.1|BQ662085 HR01H21u HR Hordeum vulgare subsp. v... 42 0.036
gb|AL502023.1|AL502023 AL502023 Hordeum vulgare Barke roots... 40 0.14
gb|BI954854.1|BI954854 HVSMEm0020B05f Hordeum vulgare green... 40 0.14
gb|BI955506.1|BI955506 HVSMEm0023G08f Hordeum vulgare green... 40 0.14
gb|BM371578.2|BM371578 EBma08_SQ003_E01_R maternal, 28 DPA,... 40 0.14
gb|CA018205.1|CA018205 HV07O23r HV Hordeum vulgare subsp. v... 40 0.14
>gb|BE602548.3|BE602548 HVSMEh0099N16f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0099N16f, mRNA sequence
Length = 730
Score = 87.7 bits (44), Expect = 7e-016
Identities = 137/168 (81%)
Strand = Plus / Plus
Query: 508 ccttcaagacggccatctggttctggatgacgccgcagtcgcccaagccgtcgtgccacg 567
||||||||||||| | ||||||||||||||||||||| | ||||||||| | ||||
Sbjct: 272 ccttcaagacggcactatggttctggatgacgccgcaggccaacaagccgtcctctcacg 331
Query: 568 ccgtgatgaccggcgactggacgccgtccgccaccgaccgcgccgccgggaggctccccg 627
||||||| || ||| | ||||||||| | ||| | ||| ||| || | |||| | ||||
Sbjct: 332 ccgtgatcacgggccaatggacgccgacggccgcagacaacgcggcggagagggtgcccg 391
Query: 628 gatatggcctcacctcgaacatcatcaacggcgggctagagtgcggca 675
| |||||| ||| | | |||||||||||||||||||| ||||||||||
Sbjct: 392 gctatggcgtcatcaccaacatcatcaacggcgggctcgagtgcggca 439
>gb|BF621706.2|BF621706 HVSMEa0011P10f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0011P10f, mRNA sequence
Length = 789
Score = 85.7 bits (43), Expect = 3e-015
Identities = 111/130 (85%), Gaps = 4/130 (3%)
Strand = Plus / Plus
Query: 183 ttctacacctacgacgccttcatcgaggccgccagcaagttccccggcttcggcaccacc 242
|||||||| |||||||||||||||| ||||||| || ||||| |||||||||||||||
Sbjct: 206 ttctacacgtacgacgccttcatcgccgccgccaacaccttcccgggcttcggcaccacc 265
Query: 243 ggcgacgagcagacg-cg-caggcgggagctcgccgccttcttcggccagacgtcccacg 300
||| | || |||| || || ||| |||||||||||||||||||||||||| |||||||
Sbjct: 266 ggc--agcgccgacgacgtcaagcgcgagctcgccgccttcttcggccagacctcccacg 323
Query: 301 aaaccaccgg 310
| || |||||
Sbjct: 324 agactaccgg 333
Score = 44.1 bits (22), Expect = 0.009
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 384 ccaccctactatggacgaggacccat 409
||||||||||||||||| ||||||||
Sbjct: 407 ccaccctactatggacggggacccat 432
>gb|BI950473.1|BI950473 HVSMEl0020N22f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0020N22f, mRNA sequence
Length = 567
Score = 85.7 bits (43), Expect = 3e-015
Identities = 111/130 (85%), Gaps = 4/130 (3%)
Strand = Plus / Plus
Query: 183 ttctacacctacgacgccttcatcgaggccgccagcaagttccccggcttcggcaccacc 242
|||||||| |||||||||||||||| ||||||| || ||||| |||||||||||||||
Sbjct: 200 ttctacacgtacgacgccttcatcgccgccgccaacaccttcccgggcttcggcaccacc 259
Query: 243 ggcgacgagcagacg-cg-caggcgggagctcgccgccttcttcggccagacgtcccacg 300
||| | || |||| || || ||| |||||||||||||||||||||||||| |||||||
Sbjct: 260 ggc--agcgccgacgacgtcaagcgcgagctcgccgccttcttcggccagacctcccacg 317
Query: 301 aaaccaccgg 310
| || |||||
Sbjct: 318 agactaccgg 327
Score = 44.1 bits (22), Expect = 0.009
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 384 ccaccctactatggacgaggacccat 409
||||||||||||||||| ||||||||
Sbjct: 401 ccaccctactatggacggggacccat 426
>gb|BI953201.1|BI953201 HVSMEm0011K01f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0011K01f, mRNA sequence
Length = 866
Score = 85.7 bits (43), Expect = 3e-015
Identities = 111/130 (85%), Gaps = 4/130 (3%)
Strand = Plus / Plus
Query: 183 ttctacacctacgacgccttcatcgaggccgccagcaagttccccggcttcggcaccacc 242
|||||||| |||||||||||||||| ||||||| || ||||| |||||||||||||||
Sbjct: 199 ttctacacgtacgacgccttcatcgccgccgccaacaccttcccgggcttcggcaccacc 258
Query: 243 ggcgacgagcagacg-cg-caggcgggagctcgccgccttcttcggccagacgtcccacg 300
||| | || |||| || || ||| |||||||||||||||||||||||||| |||||||
Sbjct: 259 ggc--agcgccgacgacgtcaagcgcgagctcgccgccttcttcggccagacctcccacg 316
Query: 301 aaaccaccgg 310
| || |||||
Sbjct: 317 agactaccgg 326
Score = 44.1 bits (22), Expect = 0.009
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 384 ccaccctactatggacgaggacccat 409
||||||||||||||||| ||||||||
Sbjct: 400 ccaccctactatggacggggacccat 425
Score = 40.1 bits (20), Expect = 0.14
Identities = 53/64 (82%)
Strand = Plus / Plus
Query: 475 acccggacctggtggcgagagaccccgtggtagccttcaagacggccatctggttctgga 534
|||||||||||||| | | |||| | | ||| |||||| |||||||| ||||||||||
Sbjct: 491 acccggacctggtgtccacagacgcgggggtgtccttcagaacggccatttggttctgga 550
Query: 535 tgac 538
||||
Sbjct: 551 tgac 554
>gb|BI954227.1|BI954227 HVSMEm0016L11f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0016L11f, mRNA sequence
Length = 645
Score = 85.7 bits (43), Expect = 3e-015
Identities = 111/130 (85%), Gaps = 4/130 (3%)
Strand = Plus / Plus
Query: 183 ttctacacctacgacgccttcatcgaggccgccagcaagttccccggcttcggcaccacc 242
|||||||| |||||||||||||||| ||||||| || ||||| |||||||||||||||
Sbjct: 198 ttctacacgtacgacgccttcatcgccgccgccaacaccttcccgggcttcggcaccacc 257
Query: 243 ggcgacgagcagacg-cg-caggcgggagctcgccgccttcttcggccagacgtcccacg 300
||| | || |||| || || ||| |||||||||||||||||||||||||| |||||||
Sbjct: 258 ggc--agcgccgacgacgtcaagcgcgagctcgccgccttcttcggccagacctcccacg 315
Query: 301 aaaccaccgg 310
| || |||||
Sbjct: 316 agactaccgg 325
Score = 44.1 bits (22), Expect = 0.009
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 384 ccaccctactatggacgaggacccat 409
||||||||||||||||| ||||||||
Sbjct: 399 ccaccctactatggacggggacccat 424
>gb|BI955968.1|BI955968 HVSMEm0025D17f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0025D17f, mRNA sequence
Length = 537
Score = 85.7 bits (43), Expect = 3e-015
Identities = 111/130 (85%), Gaps = 4/130 (3%)
Strand = Plus / Plus
Query: 183 ttctacacctacgacgccttcatcgaggccgccagcaagttccccggcttcggcaccacc 242
|||||||| |||||||||||||||| ||||||| || ||||| |||||||||||||||
Sbjct: 204 ttctacacgtacgacgccttcatcgccgccgccaacaccttcccgggcttcggcaccacc 263
Query: 243 ggcgacgagcagacg-cg-caggcgggagctcgccgccttcttcggccagacgtcccacg 300
||| | || |||| || || ||| |||||||||||||||||||||||||| |||||||
Sbjct: 264 ggc--agcgccgacgacgtcaagcgcgagctcgccgccttcttcggccagacctcccacg 321
Query: 301 aaaccaccgg 310
| || |||||
Sbjct: 322 agactaccgg 331
Score = 44.1 bits (22), Expect = 0.009
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 384 ccaccctactatggacgaggacccat 409
||||||||||||||||| ||||||||
Sbjct: 405 ccaccctactatggacggggacccat 430
>gb|BF064990.1|BF064990 HV_CEb0022F13f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0022F13f, mRNA sequence
Length = 824
Score = 85.7 bits (43), Expect = 3e-015
Identities = 111/130 (85%), Gaps = 4/130 (3%)
Strand = Plus / Plus
Query: 183 ttctacacctacgacgccttcatcgaggccgccagcaagttccccggcttcggcaccacc 242
|||||||| |||||||||||||||| ||||||| || ||||| |||||||||||||||
Sbjct: 220 ttctacacgtacgacgccttcatcgccgccgccaacaccttcccgggcttcggcaccacc 279
Query: 243 ggcgacgagcagacg-cg-caggcgggagctcgccgccttcttcggccagacgtcccacg 300
||| | || |||| || || ||| |||||||||||||||||||||||||| |||||||
Sbjct: 280 ggc--agcgccgacgacgtcaagcgcgagctcgccgccttcttcggccagacctcccacg 337
Query: 301 aaaccaccgg 310
| || |||||
Sbjct: 338 agactaccgg 347
Score = 52.0 bits (26), Expect = 4e-005
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 475 acccggacctggtggcgagagaccccgtggtagccttcaagacggccatctggttctgga 534
|||||||||||||| | | |||| | ||||| |||||| |||||||| ||||||||||
Sbjct: 512 acccggacctggtgtccacagacgcggtggtgtccttcagaacggccatttggttctgga 571
Query: 535 tgacgccgca 544
||||| ||||
Sbjct: 572 tgacggcgca 581
Score = 48.1 bits (24), Expect = 6e-004
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 648 atcatcaacggcgggctagagtgcggcaagggccag 683
||||||||||||||||| |||||| ||| |||||||
Sbjct: 685 atcatcaacggcgggctcgagtgccgcatgggccag 720
Score = 44.1 bits (22), Expect = 0.009
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 384 ccaccctactatggacgaggacccat 409
||||||||||||||||| ||||||||
Sbjct: 421 ccaccctactatggacggggacccat 446
>gb|BF265978.2|BF265978 HV_CEa0013N09f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0013N09f, mRNA sequence
Length = 568
Score = 85.7 bits (43), Expect = 3e-015
Identities = 111/130 (85%), Gaps = 4/130 (3%)
Strand = Plus / Plus
Query: 183 ttctacacctacgacgccttcatcgaggccgccagcaagttccccggcttcggcaccacc 242
|||||||| |||||||||||||||| ||||||| || ||||| |||||||||||||||
Sbjct: 197 ttctacacgtacgacgccttcatcgccgccgccaacaccttcccgggcttcggcaccacc 256
Query: 243 ggcgacgagcagacg-cg-caggcgggagctcgccgccttcttcggccagacgtcccacg 300
||| | || |||| || || ||| |||||||||||||||||||||||||| |||||||
Sbjct: 257 ggc--agcgccgacgacgtcaagcgcgagctcgccgccttcttcggccagacctcccacg 314
Query: 301 aaaccaccgg 310
| || |||||
Sbjct: 315 agactaccgg 324
Score = 44.1 bits (22), Expect = 0.009
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 384 ccaccctactatggacgaggacccat 409
||||||||||||||||| ||||||||
Sbjct: 398 ccaccctactatggacggggacccat 423
Score = 42.1 bits (21), Expect = 0.036
Identities = 55/65 (84%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 475 acccggacctggtggcgagagaccccgtggtagccttcaagacggccatctggttctgga 534
|||||||||||||| | | |||| | ||||| |||| || |||||||| ||||||||||
Sbjct: 489 acccggacctggtgtccacagacgcggtggtgtccttaaa-acggccatttggttctgga 547
Query: 535 tgacg 539
|||||
Sbjct: 548 tgacg 552
>gb|BE214577.2|BE214577 HV_CEb0003N19f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0003N19f, mRNA sequence
Length = 695
Score = 85.7 bits (43), Expect = 3e-015
Identities = 111/130 (85%), Gaps = 4/130 (3%)
Strand = Plus / Plus
Query: 183 ttctacacctacgacgccttcatcgaggccgccagcaagttccccggcttcggcaccacc 242
|||||||| |||||||||||||||| ||||||| || ||||| |||||||||||||||
Sbjct: 203 ttctacacgtacgacgccttcatcgccgccgccaacaccttcccgggcttcggcaccacc 262
Query: 243 ggcgacgagcagacg-cg-caggcgggagctcgccgccttcttcggccagacgtcccacg 300
||| | || |||| || || ||| |||||||||||||||||||||||||| |||||||
Sbjct: 263 ggc--agcgccgacgacgtcaagcgcgagctcgccgccttcttcggccagacctcccacg 320
Query: 301 aaaccaccgg 310
| || |||||
Sbjct: 321 agactaccgg 330
Score = 52.0 bits (26), Expect = 4e-005
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 475 acccggacctggtggcgagagaccccgtggtagccttcaagacggccatctggttctgga 534
|||||||||||||| | | |||| | ||||| |||||| |||||||| ||||||||||
Sbjct: 495 acccggacctggtgtccacagacgcggtggtgtccttcagaacggccatttggttctgga 554
Query: 535 tgacgccgca 544
||||| ||||
Sbjct: 555 tgacggcgca 564
>gb|BF065377.2|BF065377 HV_CEb0012E08f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0012E08f, mRNA sequence
Length = 573
Score = 85.7 bits (43), Expect = 3e-015
Identities = 111/130 (85%), Gaps = 4/130 (3%)
Strand = Plus / Plus
Query: 183 ttctacacctacgacgccttcatcgaggccgccagcaagttccccggcttcggcaccacc 242
|||||||| |||||||||||||||| ||||||| || ||||| |||||||||||||||
Sbjct: 203 ttctacacgtacgacgccttcatcgccgccgccaacaccttcccgggcttcggcaccacc 262
Query: 243 ggcgacgagcagacg-cg-caggcgggagctcgccgccttcttcggccagacgtcccacg 300
||| | || |||| || || ||| |||||||||||||||||||||||||| |||||||
Sbjct: 263 ggc--agcgccgacgacgtcaagcgcgagctcgccgccttcttcggccagacctcccacg 320
Query: 301 aaaccaccgg 310
| || |||||
Sbjct: 321 agactaccgg 330
Score = 44.1 bits (22), Expect = 0.009
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 384 ccaccctactatggacgaggacccat 409
||||||||||||||||| ||||||||
Sbjct: 404 ccaccctactatggacggggacccat 429
>gb|BE559387.2|BE559387 HV_CEb0024H02f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0024H02f, mRNA sequence
Length = 938
Score = 85.7 bits (43), Expect = 3e-015
Identities = 111/130 (85%), Gaps = 4/130 (3%)
Strand = Plus / Plus
Query: 183 ttctacacctacgacgccttcatcgaggccgccagcaagttccccggcttcggcaccacc 242
|||||||| |||||||||||||||| ||||||| || ||||| |||||||||||||||
Sbjct: 129 ttctacacgtacgacgccttcatcgccgccgccaacaccttcccgggcttcggcaccacc 188
Query: 243 ggcgacgagcagacg-cg-caggcgggagctcgccgccttcttcggccagacgtcccacg 300
||| | || |||| || || ||| |||||||||||||||||||||||||| |||||||
Sbjct: 189 ggc--agcgccgacgacgtcaagcgcgagctcgccgccttcttcggccagacctcccacg 246
Query: 301 aaaccaccgg 310
| || |||||
Sbjct: 247 agactaccgg 256
Score = 46.1 bits (23), Expect = 0.002
Identities = 60/71 (84%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 475 acccggacctggtggcgagagaccccgtggtagccttca-agacggccatctggttctgg 533
|||||||||||||| | | |||| | ||||| |||||| | |||||||| |||||||||
Sbjct: 421 acccggacctggtgtccacagacgcggtggtgtccttcagaaacggccatttggttctgg 480
Query: 534 atgacgccgca 544
|||||| ||||
Sbjct: 481 atgacggcgca 491
Score = 44.1 bits (22), Expect = 0.009
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 384 ccaccctactatggacgaggacccat 409
||||||||||||||||| ||||||||
Sbjct: 330 ccaccctactatggacggggacccat 355
>gb|CA003742.1|CA003742 HS15G18r HS Hordeum vulgare subsp. vulgare cDNA clone HS15G18
5-PRIME, mRNA sequence
Length = 482
Score = 85.7 bits (43), Expect = 3e-015
Identities = 111/130 (85%), Gaps = 4/130 (3%)
Strand = Plus / Plus
Query: 183 ttctacacctacgacgccttcatcgaggccgccagcaagttccccggcttcggcaccacc 242
|||||||| |||||||||||||||| ||||||| || ||||| |||||||||||||||
Sbjct: 201 ttctacacgtacgacgccttcatcgccgccgccaacaccttcccgggcttcggcaccacc 260
Query: 243 ggcgacgagcagacg-cg-caggcgggagctcgccgccttcttcggccagacgtcccacg 300
||| | || |||| || || ||| |||||||||||||||||||||||||| |||||||
Sbjct: 261 ggc--agcgccgacgacgtcaagcgcgagctcgccgccttcttcggccagacctcccacg 318
Query: 301 aaaccaccgg 310
| || |||||
Sbjct: 319 agactaccgg 328
>gb|CA019311.1|CA019311 HV11J14r HV Hordeum vulgare subsp. vulgare cDNA clone HV11J14
5-PRIME, mRNA sequence
Length = 470
Score = 85.7 bits (43), Expect = 3e-015
Identities = 111/130 (85%), Gaps = 4/130 (3%)
Strand = Plus / Plus
Query: 183 ttctacacctacgacgccttcatcgaggccgccagcaagttccccggcttcggcaccacc 242
|||||||| |||||||||||||||| ||||||| || ||||| |||||||||||||||
Sbjct: 213 ttctacacgtacgacgccttcatcgccgccgccaacaccttcccgggcttcggcaccacc 272
Query: 243 ggcgacgagcagacg-cg-caggcgggagctcgccgccttcttcggccagacgtcccacg 300
||| | || |||| || || ||| |||||||||||||||||||||||||| |||||||
Sbjct: 273 ggc--agcgccgacgacgtcaagcgcgagctcgccgccttcttcggccagacctcccacg 330
Query: 301 aaaccaccgg 310
| || |||||
Sbjct: 331 agactaccgg 340
>gb|BJ544278.1|BJ544278 BJ544278 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak23h08 5', mRNA sequence
Length = 559
Score = 85.7 bits (43), Expect = 3e-015
Identities = 111/130 (85%), Gaps = 4/130 (3%)
Strand = Plus / Plus
Query: 183 ttctacacctacgacgccttcatcgaggccgccagcaagttccccggcttcggcaccacc 242
|||||||| |||||||||||||||| ||||||| || ||||| |||||||||||||||
Sbjct: 65 ttctacacgtacgacgccttcatcgccgccgccaacaccttcccgggcttcggcaccacc 124
Query: 243 ggcgacgagcagacg-cg-caggcgggagctcgccgccttcttcggccagacgtcccacg 300
||| | || |||| || || ||| |||||||||||||||||||||||||| |||||||
Sbjct: 125 ggc--agcgccgacgacgtcaagcgcgagctcgccgccttcttcggccagacctcccacg 182
Query: 301 aaaccaccgg 310
| || |||||
Sbjct: 183 agactaccgg 192
Score = 52.0 bits (26), Expect = 4e-005
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 475 acccggacctggtggcgagagaccccgtggtagccttcaagacggccatctggttctgga 534
|||||||||||||| | | |||| | ||||| |||||| |||||||| ||||||||||
Sbjct: 357 acccggacctggtgtccacagacgcggtggtgtccttcagaacggccatttggttctgga 416
Query: 535 tgacgccgca 544
||||| ||||
Sbjct: 417 tgacggcgca 426
Score = 44.1 bits (22), Expect = 0.009
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 384 ccaccctactatggacgaggacccat 409
||||||||||||||||| ||||||||
Sbjct: 266 ccaccctactatggacggggacccat 291
>gb|BJ544690.1|BJ544690 BJ544690 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak34h22 5', mRNA sequence
Length = 502
Score = 85.7 bits (43), Expect = 3e-015
Identities = 111/130 (85%), Gaps = 4/130 (3%)
Strand = Plus / Plus
Query: 183 ttctacacctacgacgccttcatcgaggccgccagcaagttccccggcttcggcaccacc 242
|||||||| |||||||||||||||| ||||||| || ||||| |||||||||||||||
Sbjct: 62 ttctacacgtacgacgccttcatcgccgccgccaacaccttcccgggcttcggcaccacc 121
Query: 243 ggcgacgagcagacg-cg-caggcgggagctcgccgccttcttcggccagacgtcccacg 300
||| | || |||| || || ||| |||||||||||||||||||||||||| |||||||
Sbjct: 122 ggc--agcgccgacgacgtcaagcgcgagctcgccgccttcttcggccagacctcccacg 179
Query: 301 aaaccaccgg 310
| || |||||
Sbjct: 180 agactaccgg 189
Score = 52.0 bits (26), Expect = 4e-005
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 475 acccggacctggtggcgagagaccccgtggtagccttcaagacggccatctggttctgga 534
|||||||||||||| | | |||| | ||||| |||||| |||||||| ||||||||||
Sbjct: 354 acccggacctggtgtccacagacgcggtggtgtccttcagaacggccatttggttctgga 413
Query: 535 tgacgccgca 544
||||| ||||
Sbjct: 414 tgacggcgca 423
Score = 44.1 bits (22), Expect = 0.009
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 384 ccaccctactatggacgaggacccat 409
||||||||||||||||| ||||||||
Sbjct: 263 ccaccctactatggacggggacccat 288
>gb|BJ544954.1|BJ544954 BJ544954 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak41e18 5', mRNA sequence
Length = 627
Score = 85.7 bits (43), Expect = 3e-015
Identities = 111/130 (85%), Gaps = 4/130 (3%)
Strand = Plus / Plus
Query: 183 ttctacacctacgacgccttcatcgaggccgccagcaagttccccggcttcggcaccacc 242
|||||||| |||||||||||||||| ||||||| || ||||| |||||||||||||||
Sbjct: 63 ttctacacgtacgacgccttcatcgccgccgccaacaccttcccgggcttcggcaccacc 122
Query: 243 ggcgacgagcagacg-cg-caggcgggagctcgccgccttcttcggccagacgtcccacg 300
||| | || |||| || || ||| |||||||||||||||||||||||||| |||||||
Sbjct: 123 ggc--agcgccgacgacgtcaagcgcgagctcgccgccttcttcggccagacctcccacg 180
Query: 301 aaaccaccgg 310
| || |||||
Sbjct: 181 agactaccgg 190
Score = 56.0 bits (28), Expect = 2e-006
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 648 atcatcaacggcgggctagagtgcggcaagggccag 683
||||||||||||||||| |||||||||| |||||||
Sbjct: 528 atcatcaacggcgggctcgagtgcggcatgggccag 563
Score = 52.0 bits (26), Expect = 4e-005
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 475 acccggacctggtggcgagagaccccgtggtagccttcaagacggccatctggttctgga 534
|||||||||||||| | | |||| | ||||| |||||| |||||||| ||||||||||
Sbjct: 355 acccggacctggtgtccacagacgcggtggtgtccttcagaacggccatttggttctgga 414
Query: 535 tgacgccgca 544
||||| ||||
Sbjct: 415 tgacggcgca 424
Score = 44.1 bits (22), Expect = 0.009
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 384 ccaccctactatggacgaggacccat 409
||||||||||||||||| ||||||||
Sbjct: 264 ccaccctactatggacggggacccat 289
>gb|BJ545180.1|BJ545180 BJ545180 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak45j13 5', mRNA sequence
Length = 560
Score = 85.7 bits (43), Expect = 3e-015
Identities = 111/130 (85%), Gaps = 4/130 (3%)
Strand = Plus / Plus
Query: 183 ttctacacctacgacgccttcatcgaggccgccagcaagttccccggcttcggcaccacc 242
|||||||| |||||||||||||||| ||||||| || ||||| |||||||||||||||
Sbjct: 71 ttctacacgtacgacgccttcatcgccgccgccaacaccttcccgggcttcggcaccacc 130
Query: 243 ggcgacgagcagacg-cg-caggcgggagctcgccgccttcttcggccagacgtcccacg 300
||| | || |||| || || ||| |||||||||||||||||||||||||| |||||||
Sbjct: 131 ggc--agcgccgacgacgtcaagcgcgagctcgccgccttcttcggccagacctcccacg 188
Query: 301 aaaccaccgg 310
| || |||||
Sbjct: 189 agactaccgg 198
Score = 52.0 bits (26), Expect = 4e-005
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 475 acccggacctggtggcgagagaccccgtggtagccttcaagacggccatctggttctgga 534
|||||||||||||| | | |||| | ||||| |||||| |||||||| ||||||||||
Sbjct: 363 acccggacctggtgtccacagacgcggtggtgtccttcagaacggccatttggttctgga 422
Query: 535 tgacgccgca 544
||||| ||||
Sbjct: 423 tgacggcgca 432
Score = 44.1 bits (22), Expect = 0.009
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 384 ccaccctactatggacgaggacccat 409
||||||||||||||||| ||||||||
Sbjct: 272 ccaccctactatggacggggacccat 297
Score = 42.1 bits (21), Expect = 0.036
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 648 atcatcaacggcgggctagagtgcg 672
||||||||||||||||| |||||||
Sbjct: 536 atcatcaacggcgggctcgagtgcg 560
>gb|CB878161.1|CB878161 HP07J01T HP Hordeum vulgare subsp. vulgare cDNA clone HP07J01
5-PRIME, mRNA sequence
Length = 606
Score = 85.7 bits (43), Expect = 3e-015
Identities = 111/130 (85%), Gaps = 4/130 (3%)
Strand = Plus / Plus
Query: 183 ttctacacctacgacgccttcatcgaggccgccagcaagttccccggcttcggcaccacc 242
|||||||| |||||||||||||||| ||||||| || ||||| |||||||||||||||
Sbjct: 219 ttctacacgtacgacgccttcatcgccgccgccaacaccttcccgggcttcggcaccacc 278
Query: 243 ggcgacgagcagacg-cg-caggcgggagctcgccgccttcttcggccagacgtcccacg 300
||| | || |||| || || ||| |||||||||||||||||||||||||| |||||||
Sbjct: 279 ggc--agcgccgacgacgtcaagcgcgagctcgccgccttcttcggccagacctcccacg 336
Query: 301 aaaccaccgg 310
| || |||||
Sbjct: 337 agactaccgg 346
Score = 52.0 bits (26), Expect = 4e-005
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 475 acccggacctggtggcgagagaccccgtggtagccttcaagacggccatctggttctgga 534
|||||||||||||| | | |||| | ||||| |||||| |||||||| ||||||||||
Sbjct: 511 acccggacctggtgtccacagacgcggtggtgtccttcagaacggccatttggttctgga 570
Query: 535 tgacgccgca 544
||||| ||||
Sbjct: 571 tgacggcgca 580
Score = 44.1 bits (22), Expect = 0.009
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 384 ccaccctactatggacgaggacccat 409
||||||||||||||||| ||||||||
Sbjct: 420 ccaccctactatggacggggacccat 445
>emb|X78672.1|HVCHT2B H.vulgare mRNA for chitinase 2b
Length = 1013
Score = 85.7 bits (43), Expect = 3e-015
Identities = 111/130 (85%), Gaps = 4/130 (3%)
Strand = Plus / Plus
Query: 183 ttctacacctacgacgccttcatcgaggccgccagcaagttccccggcttcggcaccacc 242
|||||||| |||||||||||||||| ||||||| || ||||| |||||||||||||||
Sbjct: 203 ttctacacgtacgacgccttcatcgccgccgccaacaccttcccgggcttcggcaccacc 262
Query: 243 ggcgacgagcagacg-cg-caggcgggagctcgccgccttcttcggccagacgtcccacg 300
||| | || |||| || || ||| |||||||||||||||||||||||||| |||||||
Sbjct: 263 ggc--agcgccgacgacgtcaagcgcgagctcgccgccttcttcggccagacctcccacg 320
Query: 301 aaaccaccgg 310
| || |||||
Sbjct: 321 agactaccgg 330
Score = 56.0 bits (28), Expect = 2e-006
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 648 atcatcaacggcgggctagagtgcggcaagggccag 683
||||||||||||||||| |||||||||| |||||||
Sbjct: 668 atcatcaacggcgggctcgagtgcggcatgggccag 703
Score = 44.1 bits (22), Expect = 0.009
Identities = 58/70 (82%)
Strand = Plus / Plus
Query: 475 acccggacctggtggcgagagaccccgtggtagccttcaagacggccatctggttctgga 534
|||||||||||||| | | |||| | ||||| |||||| |||| ||| ||||||||||
Sbjct: 495 acccggacctggtgtccacagacgcggtggtgtccttcagaacggtcatttggttctgga 554
Query: 535 tgacgccgca 544
||||| ||||
Sbjct: 555 tgacggcgca 564
Score = 44.1 bits (22), Expect = 0.009
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 384 ccaccctactatggacgaggacccat 409
||||||||||||||||| ||||||||
Sbjct: 404 ccaccctactatggacggggacccat 429
>gb|BE454845.1|BE454845 HVSMEh0095E05f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0095E05f, mRNA sequence
Length = 717
Score = 83.8 bits (42), Expect = 1e-014
Identities = 57/62 (91%)
Strand = Plus / Minus
Query: 513 aagacggccatctggttctggatgacgccgcagtcgcccaagccgtcgtgccacgccgtg 572
||||||||||||||||||||||||||| ||||| |||||||||||||| |||| || |||
Sbjct: 431 aagacggccatctggttctggatgacggcgcagccgcccaagccgtcgagccatgctgtg 372
Query: 573 at 574
||
Sbjct: 371 at 370
>gb|BG365536.1|BG365536 HVSMEi0003B22f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0003B22f, mRNA sequence
Length = 805
Score = 83.8 bits (42), Expect = 1e-014
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 513 aagacggccatctggttctggatgacgccgcagtcgcccaagccgtcgtgccacgccgtg 572
||||||||||||||||||||||||||| ||||| |||||||||||||| |||| || |||
Sbjct: 492 aagacggccatctggttctggatgacggcgcagccgcccaagccgtcgagccatgctgtg 551
Query: 573 at 574
||
Sbjct: 552 at 553
Score = 56.0 bits (28), Expect = 2e-006
Identities = 70/84 (83%)
Strand = Plus / Plus
Query: 273 gccgccttcttcggccagacgtcccacgaaaccaccggtggatgggcgactgctccggat 332
||||||||| | | |||||| |||||||| |||||||| ||||||||||| || |||||
Sbjct: 210 gccgccttcctggcccagacctcccacgagaccaccggcggatgggcgacggcaccggac 269
Query: 333 ggaccgtttgcctggggatactgc 356
|| | || |||||||| ||||||
Sbjct: 270 ggggccttcgcctggggctactgc 293
Score = 44.1 bits (22), Expect = 0.009
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 182 cttctacacctacgacgccttc 203
||||||||||||||||||||||
Sbjct: 119 cttctacacctacgacgccttc 140
>gb|BI949025.1|BI949025 HVSMEl0012B07f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0012B07f, mRNA sequence
Length = 854
Score = 83.8 bits (42), Expect = 1e-014
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 513 aagacggccatctggttctggatgacgccgcagtcgcccaagccgtcgtgccacgccgtg 572
||||||||||||||||||||||||||| ||||| |||||||||||||| |||| || |||
Sbjct: 204 aagacggccatctggttctggatgacggcgcagccgcccaagccgtcgagccatgctgtg 263
Query: 573 at 574
||
Sbjct: 264 at 265
>gb|BI950475.1|BI950475 HVSMEl0020N24f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0020N24f, mRNA sequence
Length = 574
Score = 83.8 bits (42), Expect = 1e-014
Identities = 104/121 (85%), Gaps = 4/121 (3%)
Strand = Plus / Plus
Query: 183 ttctacacctacgacgccttcatcgaggccgccagcaagttccccggcttcggcaccacc 242
|||||||| |||||||||||||||| ||||||| || ||||| |||||||||||||||
Sbjct: 200 ttctacacgtacgacgccttcatcggcgccgccaacaccttcccgggcttcggcaccacc 259
Query: 243 ggcgacgagcagacg-cg-caggcgggagctcgccgccttcttcggccagacgtcccacg 300
||| | || |||| || || ||| |||||||||||||||||||||||||| |||||||
Sbjct: 260 ggc--agcgccgacgacgtcaagcgcgagctcgccgccttcttcggccagacctcccacg 317
Query: 301 a 301
|
Sbjct: 318 a 318
Score = 44.1 bits (22), Expect = 0.009
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 384 ccaccctactatggacgaggacccat 409
||||||||||||||||| ||||||||
Sbjct: 401 ccaccctactatggacggggacccat 426
>gb|BG414755.1|BG414755 HVSMEk0003J19f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0003J19f, mRNA sequence
Length = 625
Score = 83.8 bits (42), Expect = 1e-014
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 513 aagacggccatctggttctggatgacgccgcagtcgcccaagccgtcgtgccacgccgtg 572
||||||||||||||||||||||||||| ||||| |||||||||||||| |||| || |||
Sbjct: 184 aagacggccatctggttctggatgacggcgcagccgcccaagccgtcgagccatgctgtg 243
Query: 573 at 574
||
Sbjct: 244 at 245
>gb|BG415203.1|BG415203 HVSMEk0005I16f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0005I16f, mRNA sequence
Length = 908
Score = 83.8 bits (42), Expect = 1e-014
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 513 aagacggccatctggttctggatgacgccgcagtcgcccaagccgtcgtgccacgccgtg 572
||||||||||||||||||||||||||| ||||| |||||||||||||| |||| || |||
Sbjct: 308 aagacggccatctggttctggatgacggcgcagccgcccaagccgtcgagccatgctgtg 367
Query: 573 at 574
||
Sbjct: 368 at 369
Score = 48.1 bits (24), Expect = 6e-004
Identities = 69/84 (82%)
Strand = Plus / Plus
Query: 273 gccgccttcttcggccagacgtcccacgaaaccaccggtggatgggcgactgctccggat 332
||||||||| | | ||| || |||||||| |||||||| ||||||||||| || |||||
Sbjct: 26 gccgccttcctggcccaaacctcccacgagaccaccggcggatgggcgacggcaccggac 85
Query: 333 ggaccgtttgcctggggatactgc 356
|| | || |||||||| ||||||
Sbjct: 86 ggggccttcgcctggggctactgc 109
>gb|BG416746.1|BG416746 HVSMEk0014F08f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0014F08f, mRNA sequence
Length = 682
Score = 83.8 bits (42), Expect = 1e-014
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 513 aagacggccatctggttctggatgacgccgcagtcgcccaagccgtcgtgccacgccgtg 572
||||||||||||||||||||||||||| ||||| |||||||||||||| |||| || |||
Sbjct: 508 aagacggccatctggttctggatgacggcgcagccgcccaagccgtcgagccatgctgtg 567
Query: 573 at 574
||
Sbjct: 568 at 569
Score = 56.0 bits (28), Expect = 2e-006
Identities = 70/84 (83%)
Strand = Plus / Plus
Query: 273 gccgccttcttcggccagacgtcccacgaaaccaccggtggatgggcgactgctccggat 332
||||||||| | | |||||| |||||||| |||||||| ||||||||||| || |||||
Sbjct: 226 gccgccttcctggcccagacctcccacgagaccaccggcggatgggcgacggcaccggac 285
Query: 333 ggaccgtttgcctggggatactgc 356
|| | || |||||||| ||||||
Sbjct: 286 ggggccttcgcctggggctactgc 309
Score = 44.1 bits (22), Expect = 0.009
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 182 cttctacacctacgacgccttc 203
||||||||||||||||||||||
Sbjct: 135 cttctacacctacgacgccttc 156
>gb|BG417971.1|BG417971 HVSMEk0020F20f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0020F20f, mRNA sequence
Length = 468
Score = 83.8 bits (42), Expect = 1e-014
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 513 aagacggccatctggttctggatgacgccgcagtcgcccaagccgtcgtgccacgccgtg 572
||||||||||||||||||||||||||| ||||| |||||||||||||| |||| || |||
Sbjct: 175 aagacggccatctggttctggatgacggcgcagccgcccaagccgtcgagccatgctgtg 234
Query: 573 at 574
||
Sbjct: 235 at 236
>gb|BE454492.3|BE454492 HVSMEh0094A02f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0094A02f, mRNA sequence
Length = 688
Score = 83.8 bits (42), Expect = 1e-014
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 513 aagacggccatctggttctggatgacgccgcagtcgcccaagccgtcgtgccacgccgtg 572
||||||||||||||||||||||||||| ||||| |||||||||||||| |||| || |||
Sbjct: 228 aagacggccatctggttctggatgacggcgcagccgcccaagccgtcgagccatgctgtg 287
Query: 573 at 574
||
Sbjct: 288 at 289
>gb|BE602672.2|BE602672 HVSMEh0101A21f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0101A21f, mRNA sequence
Length = 730
Score = 83.8 bits (42), Expect = 1e-014
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 513 aagacggccatctggttctggatgacgccgcagtcgcccaagccgtcgtgccacgccgtg 572
||||||||||||||||||||||||||| ||||| |||||||||||||| |||| || |||
Sbjct: 515 aagacggccatctggttctggatgacggcgcagccgcccaagccgtcgagccatgctgtg 574
Query: 573 at 574
||
Sbjct: 575 at 576
Score = 56.0 bits (28), Expect = 2e-006
Identities = 70/84 (83%)
Strand = Plus / Plus
Query: 273 gccgccttcttcggccagacgtcccacgaaaccaccggtggatgggcgactgctccggat 332
||||||||| | | |||||| |||||||| |||||||| ||||||||||| || |||||
Sbjct: 232 gccgccttcctggcccagacctcccacgagaccaccggcggatgggcgacggcaccggac 291
Query: 333 ggaccgtttgcctggggatactgc 356
|| | || |||||||| ||||||
Sbjct: 292 ggggccttcgcctggggctactgc 315
Score = 44.1 bits (22), Expect = 0.009
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 182 cttctacacctacgacgccttc 203
||||||||||||||||||||||
Sbjct: 141 cttctacacctacgacgccttc 162
>gb|BG365634.2|BG365634 HVSMEi0003I02f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0003I02f, mRNA sequence
Length = 741
Score = 83.8 bits (42), Expect = 1e-014
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 513 aagacggccatctggttctggatgacgccgcagtcgcccaagccgtcgtgccacgccgtg 572
||||||||||||||||||||||||||| ||||| |||||||||||||| |||| || |||
Sbjct: 576 aagacggccatctggttctggatgacggcgcagccgcccaagccgtcgagccatgctgtg 635
Query: 573 at 574
||
Sbjct: 636 at 637
Score = 56.0 bits (28), Expect = 2e-006
Identities = 70/84 (83%)
Strand = Plus / Plus
Query: 273 gccgccttcttcggccagacgtcccacgaaaccaccggtggatgggcgactgctccggat 332
||||||||| | | |||||| |||||||| |||||||| ||||||||||| || |||||
Sbjct: 294 gccgccttcctggcccagacctcccacgagaccaccggcggatgggcgacggcaccggac 353
Query: 333 ggaccgtttgcctggggatactgc 356
|| | || |||||||| ||||||
Sbjct: 354 ggggccttcgcctggggctactgc 377
Score = 44.1 bits (22), Expect = 0.009
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 182 cttctacacctacgacgccttc 203
||||||||||||||||||||||
Sbjct: 203 cttctacacctacgacgccttc 224
>gb|BG369358.2|BG369358 HVSMEi0024B14f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0024B14f, mRNA sequence
Length = 904
Score = 83.8 bits (42), Expect = 1e-014
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 513 aagacggccatctggttctggatgacgccgcagtcgcccaagccgtcgtgccacgccgtg 572
||||||||||||||||||||||||||| ||||| |||||||||||||| |||| || |||
Sbjct: 228 aagacggccatctggttctggatgacggcgcagccgcccaagccgtcgagccatgctgtg 287
Query: 573 at 574
||
Sbjct: 288 at 289
>gb|BG418257.2|BG418257 HVSMEk0022B19f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0022B19f, mRNA sequence
Length = 392
Score = 83.8 bits (42), Expect = 1e-014
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 513 aagacggccatctggttctggatgacgccgcagtcgcccaagccgtcgtgccacgccgtg 572
||||||||||||||||||||||||||| ||||| |||||||||||||| |||| || |||
Sbjct: 36 aagacggccatctggttctggatgacggcgcagccgcccaagccgtcgagccatgctgtg 95
Query: 573 at 574
||
Sbjct: 96 at 97
>gb|BE411224.1|BE411224 ISC003.D02F990524 ITEC ISC Barley Leaf Library Hordeum vulgare
subsp. vulgare cDNA clone ISC003.D02, mRNA sequence
Length = 489
Score = 79.8 bits (40), Expect = 2e-013
Identities = 85/100 (85%)
Strand = Plus / Plus
Query: 475 acccggacctggtggcgagagaccccgtggtagccttcaagacggccatctggttctgga 534
||||||||||||||||| ||||| ||| || ||||||||||| || ||||||||||
Sbjct: 283 acccggacctggtggcgtcggacccgacggtggcgttcaagacggcgatttggttctgga 342
Query: 535 tgacgccgcagtcgcccaagccgtcgtgccacgccgtgat 574
||||| ||||||| ||||||||||||||||| ||||||
Sbjct: 343 tgacgacgcagtccaacaagccgtcgtgccacgacgtgat 382
Score = 63.9 bits (32), Expect = 1e-008
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 263 gcgggagctcgccgccttcttcggccagacgtcccacgaaaccaccgg 310
||||||| | |||||||||||||||||||| |||||||| ||||||||
Sbjct: 29 gcgggaggtggccgccttcttcggccagacttcccacgagaccaccgg 76
>gb|BE411672.1|BE411672 ISC008.A09F990802 ITEC ISC Barley Leaf Library Hordeum vulgare
subsp. vulgare cDNA clone ISC008.A09, mRNA sequence
Length = 486
Score = 79.8 bits (40), Expect = 2e-013
Identities = 85/100 (85%)
Strand = Plus / Plus
Query: 475 acccggacctggtggcgagagaccccgtggtagccttcaagacggccatctggttctgga 534
||||||||||||||||| ||||| ||| || ||||||||||| || ||||||||||
Sbjct: 51 acccggacctggtggcgtcggacccgacggtggcgttcaagacggcgatttggttctgga 110
Query: 535 tgacgccgcagtcgcccaagccgtcgtgccacgccgtgat 574
||||| ||||||| ||||||||||||||||| ||||||
Sbjct: 111 tgacgacgcagtccaacaagccgtcgtgccacgacgtgat 150
>gb|BF064981.3|BF064981 HV_CEb0022E17f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0022E17f, mRNA sequence
Length = 815
Score = 79.8 bits (40), Expect = 2e-013
Identities = 106/128 (82%)
Strand = Plus / Plus
Query: 183 ttctacacctacgacgccttcatcgaggccgccagcaagttccccggcttcggcaccacc 242
||||||||||||||||||||| | | ||||||||| |||||| | |||||| |||||
Sbjct: 308 ttctacacctacgacgccttcttggccgccgccagcgcgttcccggccttcggtaccacg 367
Query: 243 ggcgacgagcagacgcgcaggcgggagctcgccgccttcttcggccagacgtcccacgaa 302
|| ||| | | || || | ||||||| | |||||||||||||||||||| ||||||||
Sbjct: 368 ggggacttggacacccggaagcgggaggtggccgccttcttcggccagacttcccacgag 427
Query: 303 accaccgg 310
||||||||
Sbjct: 428 accaccgg 435
Score = 73.8 bits (37), Expect = 1e-011
Identities = 79/93 (84%)
Strand = Plus / Plus
Query: 475 acccggacctggtggcgagagaccccgtggtagccttcaagacggccatctggttctgga 534
||||||||||||||||| ||||| ||| || ||||||||||| || ||||||||||
Sbjct: 642 acccggacctggtggcgtcggacccgacggtggcgttcaagacggcgatttggttctgga 701
Query: 535 tgacgccgcagtcgcccaagccgtcgtgccacg 567
||||| ||||||| |||||||||||||||||
Sbjct: 702 tgacgacgcagtccaacaagccgtcgtgccacg 734
>gb|AV926184.1|AV926184 AV926184 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd18g16 5', mRNA sequence
Length = 507
Score = 79.8 bits (40), Expect = 2e-013
Identities = 85/100 (85%)
Strand = Plus / Plus
Query: 475 acccggacctggtggcgagagaccccgtggtagccttcaagacggccatctggttctgga 534
||||||||||||||||| ||||| ||| || ||||||||||| || ||||||||||
Sbjct: 211 acccggacctggtggcgtcggacccgacggtggcgttcaagacggcgatttggttctgga 270
Query: 535 tgacgccgcagtcgcccaagccgtcgtgccacgccgtgat 574
||||| ||||||| ||||||||||||||||| ||||||
Sbjct: 271 tgacgacgcagtccaacaagccgtcgtgccacgacgtgat 310
>gb|AV926193.1|AV926193 AV926193 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd18h03 5', mRNA sequence
Length = 511
Score = 79.8 bits (40), Expect = 2e-013
Identities = 85/100 (85%)
Strand = Plus / Plus
Query: 475 acccggacctggtggcgagagaccccgtggtagccttcaagacggccatctggttctgga 534
||||||||||||||||| ||||| ||| || ||||||||||| || ||||||||||
Sbjct: 210 acccggacctggtggcgtcggacccgacggtggcgttcaagacggcgatttggttctgga 269
Query: 535 tgacgccgcagtcgcccaagccgtcgtgccacgccgtgat 574
||||| ||||||| ||||||||||||||||| ||||||
Sbjct: 270 tgacgacgcagtccaacaagccgtcgtgccacgacgtgat 309
>gb|AV926194.1|AV926194 AV926194 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd18h04 5', mRNA sequence
Length = 346
Score = 79.8 bits (40), Expect = 2e-013
Identities = 85/100 (85%)
Strand = Plus / Plus
Query: 475 acccggacctggtggcgagagaccccgtggtagccttcaagacggccatctggttctgga 534
||||||||||||||||| ||||| ||| || ||||||||||| || ||||||||||
Sbjct: 209 acccggacctggtggcgtcggacccgacggtggcgttcaagacggcgatttggttctgga 268
Query: 535 tgacgccgcagtcgcccaagccgtcgtgccacgccgtgat 574
||||| ||||||| ||||||||||||||||| ||||||
Sbjct: 269 tgacgacgcagtccaacaagccgtcgtgccacgacgtgat 308
>gb|AV931065.1|AV931065 AV931065 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd18g16 3', mRNA sequence
Length = 650
Score = 79.8 bits (40), Expect = 2e-013
Identities = 85/100 (85%)
Strand = Plus / Minus
Query: 475 acccggacctggtggcgagagaccccgtggtagccttcaagacggccatctggttctgga 534
||||||||||||||||| ||||| ||| || ||||||||||| || ||||||||||
Sbjct: 555 acccggacctggtggcgtcggacccgacggtggcgttcaagacggcgatttggttctgga 496
Query: 535 tgacgccgcagtcgcccaagccgtcgtgccacgccgtgat 574
||||| ||||||| ||||||||||||||||| ||||||
Sbjct: 495 tgacgacgcagtccaacaagccgtcgtgccacgacgtgat 456
>gb|AV933330.1|AV933330 AV933330 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal6f19 5', mRNA sequence
Length = 192
Score = 79.8 bits (40), Expect = 2e-013
Identities = 85/100 (85%)
Strand = Plus / Plus
Query: 475 acccggacctggtggcgagagaccccgtggtagccttcaagacggccatctggttctgga 534
||||||||||||||||| ||||| ||| || ||||||||||| || ||||||||||
Sbjct: 57 acccggacctggtggcgtcggacccgacggtggcgttcaagacggcgatttggttctgga 116
Query: 535 tgacgccgcagtcgcccaagccgtcgtgccacgccgtgat 574
||||| ||||||| ||||||||||||||||| ||||||
Sbjct: 117 tgacgacgcagtccaacaagccgtcgtgccacgacgtgat 156
>gb|AV933371.1|AV933371 AV933371 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal6i19 5', mRNA sequence
Length = 583
Score = 79.8 bits (40), Expect = 2e-013
Identities = 85/100 (85%)
Strand = Plus / Plus
Query: 475 acccggacctggtggcgagagaccccgtggtagccttcaagacggccatctggttctgga 534
||||||||||||||||| ||||| ||| || ||||||||||| || ||||||||||
Sbjct: 58 acccggacctggtggcgtcggacccgacggtggcgttcaagacggcgatttggttctgga 117
Query: 535 tgacgccgcagtcgcccaagccgtcgtgccacgccgtgat 574
||||| ||||||| ||||||||||||||||| ||||||
Sbjct: 118 tgacgacgcagtccaacaagccgtcgtgccacgacgtgat 157
>gb|AV933383.1|AV933383 AV933383 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal6j13 5', mRNA sequence
Length = 443
Score = 79.8 bits (40), Expect = 2e-013
Identities = 85/100 (85%)
Strand = Plus / Plus
Query: 475 acccggacctggtggcgagagaccccgtggtagccttcaagacggccatctggttctgga 534
||||||||||||||||| ||||| ||| || ||||||||||| || ||||||||||
Sbjct: 16 acccggacctggtggcgtcggacccgacggtggcgttcaagacggcgatttggttctgga 75
Query: 535 tgacgccgcagtcgcccaagccgtcgtgccacgccgtgat 574
||||| ||||||| ||||||||||||||||| ||||||
Sbjct: 76 tgacgacgcagtccaacaagccgtcgtgccacgacgtgat 115
>gb|AV935770.1|AV935770 AV935770 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal6f19 3', mRNA sequence
Length = 615
Score = 79.8 bits (40), Expect = 2e-013
Identities = 85/100 (85%)
Strand = Plus / Minus
Query: 475 acccggacctggtggcgagagaccccgtggtagccttcaagacggccatctggttctgga 534
||||||||||||||||| ||||| ||| || ||||||||||| || ||||||||||
Sbjct: 559 acccggacctggtggcgtcggacccgacggtggcgttcaagacggcgatttggttctgga 500
Query: 535 tgacgccgcagtcgcccaagccgtcgtgccacgccgtgat 574
||||| ||||||| ||||||||||||||||| ||||||
Sbjct: 499 tgacgacgcagtccaacaagccgtcgtgccacgacgtgat 460
>gb|AV935813.1|AV935813 AV935813 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal6i19 3', mRNA sequence
Length = 620
Score = 79.8 bits (40), Expect = 2e-013
Identities = 85/100 (85%)
Strand = Plus / Minus
Query: 475 acccggacctggtggcgagagaccccgtggtagccttcaagacggccatctggttctgga 534
||||||||||||||||| ||||| ||| || ||||||||||| || ||||||||||
Sbjct: 554 acccggacctggtggcgtcggacccgacggtggcgttcaagacggcgatttggttctgga 495
Query: 535 tgacgccgcagtcgcccaagccgtcgtgccacgccgtgat 574
||||| ||||||| ||||||||||||||||| ||||||
Sbjct: 494 tgacgacgcagtccaacaagccgtcgtgccacgacgtgat 455
>gb|BJ469713.1|BJ469713 BJ469713 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal37c14 5', mRNA sequence
Length = 523
Score = 79.8 bits (40), Expect = 2e-013
Identities = 85/100 (85%)
Strand = Plus / Plus
Query: 475 acccggacctggtggcgagagaccccgtggtagccttcaagacggccatctggttctgga 534
||||||||||||||||| ||||| ||| || ||||||||||| || ||||||||||
Sbjct: 58 acccggacctggtggcgtcggacccgacggtggcgttcaagacggcgatttggttctgga 117
Query: 535 tgacgccgcagtcgcccaagccgtcgtgccacgccgtgat 574
||||| ||||||| ||||||||||||||||| ||||||
Sbjct: 118 tgacgacgcagtccaacaagccgtcgtgccacgacgtgat 157
>gb|BJ476805.1|BJ476805 BJ476805 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal37c14 3', mRNA sequence
Length = 589
Score = 79.8 bits (40), Expect = 2e-013
Identities = 85/100 (85%)
Strand = Plus / Minus
Query: 475 acccggacctggtggcgagagaccccgtggtagccttcaagacggccatctggttctgga 534
||||||||||||||||| ||||| ||| || ||||||||||| || ||||||||||
Sbjct: 523 acccggacctggtggcgtcggacccgacggtggcgttcaagacggcgatttggttctgga 464
Query: 535 tgacgccgcagtcgcccaagccgtcgtgccacgccgtgat 574
||||| ||||||| ||||||||||||||||| ||||||
Sbjct: 463 tgacgacgcagtccaacaagccgtcgtgccacgacgtgat 424
>gb|BM372933.2|BM372933 EBma04_SQ002_H02_R maternal, 10 DPA, no treatment, cv Optic, EBma04
Hordeum vulgare subsp. vulgare cDNA clone
EBma04_SQ002_H02 5', mRNA sequence
Length = 353
Score = 79.8 bits (40), Expect = 2e-013
Identities = 85/100 (85%)
Strand = Plus / Plus
Query: 475 acccggacctggtggcgagagaccccgtggtagccttcaagacggccatctggttctgga 534
||||||||||||||||| ||||| ||| || ||||||||||| || ||||||||||
Sbjct: 177 acccggacctggtggcgtcggacccgacggtggcgttcaagacggcgatttggttctgga 236
Query: 535 tgacgccgcagtcgcccaagccgtcgtgccacgccgtgat 574
||||| ||||||| ||||||||||||||||| ||||||
Sbjct: 237 tgacgacgcagtccaacaagccgtcgtgccacgacgtgat 276
>gb|CA022080.1|CA022080 HZ42B20r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ42B20
5-PRIME, mRNA sequence
Length = 598
Score = 79.8 bits (40), Expect = 2e-013
Identities = 85/100 (85%)
Strand = Plus / Plus
Query: 475 acccggacctggtggcgagagaccccgtggtagccttcaagacggccatctggttctgga 534
||||||||||||||||| ||||| ||| || ||||||||||| || ||||||||||
Sbjct: 277 acccggacctggtggcgtcggacccgacggtggcgttcaagacggcgatttggttctgga 336
Query: 535 tgacgccgcagtcgcccaagccgtcgtgccacgccgtgat 574
||||| ||||||| ||||||||||||||||| ||||||
Sbjct: 337 tgacgacgcagtccaacaagccgtcgtgccacgacgtgat 376
Score = 63.9 bits (32), Expect = 1e-008
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 263 gcgggagctcgccgccttcttcggccagacgtcccacgaaaccaccgg 310
||||||| | |||||||||||||||||||| |||||||| ||||||||
Sbjct: 23 gcgggaggtggccgccttcttcggccagacttcccacgagaccaccgg 70
>gb|CA026694.1|CA026694 HZ56K16r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ56K16
5-PRIME, mRNA sequence
Length = 363
Score = 79.8 bits (40), Expect = 2e-013
Identities = 85/100 (85%)
Strand = Plus / Plus
Query: 475 acccggacctggtggcgagagaccccgtggtagccttcaagacggccatctggttctgga 534
||||||||||||||||| ||||| ||| || ||||||||||| || ||||||||||
Sbjct: 95 acccggacctggtggcgtcggacccgacggtggcgttcaagacggcgatttggttctgga 154
Query: 535 tgacgccgcagtcgcccaagccgtcgtgccacgccgtgat 574
||||| ||||||| ||||||||||||||||| ||||||
Sbjct: 155 tgacgacgcagtccaacaagccgtcgtgccacgacgtgat 194
>gb|BJ546657.1|BJ546657 BJ546657 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak45j13 3', mRNA sequence
Length = 718
Score = 79.8 bits (40), Expect = 2e-013
Identities = 110/130 (84%), Gaps = 4/130 (3%)
Strand = Plus / Minus
Query: 183 ttctacacctacgacgccttcatcgaggccgccagcaagttccccggcttcggcaccacc 242
|||||||| |||||||| ||||||| ||||||| || ||||| |||||||||||||||
Sbjct: 718 ttctacacgtacgacgcnttcatcgccgccgccaacaccttcccgggcttcggcaccacc 659
Query: 243 ggcgacgagcagacg-cg-caggcgggagctcgccgccttcttcggccagacgtcccacg 300
||| | || |||| || || ||| |||||||||||||||||||||||||| |||||||
Sbjct: 658 ggc--agcgccgacgacgtcaagcgcgagctcgccgccttcttcggccagacctcccacg 601
Query: 301 aaaccaccgg 310
| || |||||
Sbjct: 600 agactaccgg 591
Score = 56.0 bits (28), Expect = 2e-006
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 648 atcatcaacggcgggctagagtgcggcaagggccag 683
||||||||||||||||| |||||||||| |||||||
Sbjct: 253 atcatcaacggcgggctcgagtgcggcatgggccag 218
Score = 52.0 bits (26), Expect = 4e-005
Identities = 59/70 (84%)
Strand = Plus / Minus
Query: 475 acccggacctggtggcgagagaccccgtggtagccttcaagacggccatctggttctgga 534
|||||||||||||| | | |||| | ||||| |||||| |||||||| ||||||||||
Sbjct: 426 acccggacctggtgtccacagacgcggtggtgtccttcagaacggccatttggttctgga 367
Query: 535 tgacgccgca 544
||||| ||||
Sbjct: 366 tgacggcgca 357
Score = 44.1 bits (22), Expect = 0.009
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 384 ccaccctactatggacgaggacccat 409
||||||||||||||||| ||||||||
Sbjct: 517 ccaccctactatggacggggacccat 492
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 148,066
Number of Sequences: 312970
Number of extensions: 148066
Number of successful extensions: 41420
Number of sequences better than 0.5: 233
Number of HSP's better than 0.5 without gapping: 232
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 40668
Number of HSP's gapped (non-prelim): 705
length of query: 1027
length of database: 175,134,539
effective HSP length: 19
effective length of query: 1008
effective length of database: 169,188,109
effective search space: 170541613872
effective search space used: 170541613872
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)