BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.536
(819 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BI947504.1|BI947504 HVSMEl0005L08f Hordeum vulgare spike... 377 e-103
gb|BF263745.3|BF263745 HV_CEa0007I20f Hordeum vulgare seedl... 377 e-103
gb|BQ458499.1|BQ458499 HA05A22r HA Hordeum vulgare subsp. v... 377 e-103
gb|BQ460364.1|BQ460364 HA09O16r HA Hordeum vulgare subsp. v... 377 e-103
gb|BQ460503.1|BQ460503 HA09G03r HA Hordeum vulgare subsp. v... 377 e-103
gb|BQ470988.1|BQ470988 HX04K05r HX Hordeum vulgare subsp. v... 377 e-103
gb|BM376771.2|BM376771 EBem05_SQ003_D01_R embryo, 14 DPA, n... 377 e-103
gb|BM369548.2|BM369548 EBem07_SQ003_O19_R embryo, 28 DPA, n... 377 e-103
gb|BM376181.2|BM376181 EBma01_SQ002_J11_R maternal, 4 DPA, ... 377 e-103
gb|BM372228.2|BM372228 EBro03_SQ004_G02_R root, 3 week, wat... 377 e-103
gb|BQ760071.1|BQ760071 EBpi07_SQ003_J01_R pistil, 12 DPA, n... 377 e-103
gb|BQ764827.1|BQ764827 EBca01_SQ005_C05_R carpel, pre-anthe... 377 e-103
gb|BQ768464.1|BQ768464 EBro08_SQ011_E19_R root, 3 week, dro... 377 e-103
gb|BU968883.1|BU968883 HB08O03r BC Hordeum vulgare subsp. v... 377 e-103
gb|BU981711.1|BU981711 HA24G15r HA Hordeum vulgare subsp. v... 377 e-103
gb|BU983978.1|BU983978 HA31J22r HA Hordeum vulgare subsp. v... 377 e-103
gb|BU988657.1|BU988657 HF18F03r HF Hordeum vulgare subsp. v... 377 e-103
gb|BU988764.1|BU988764 HF18K08r HF Hordeum vulgare subsp. v... 377 e-103
gb|BU990202.1|BU990202 HF24G03r HF Hordeum vulgare subsp. v... 377 e-103
gb|CA024600.1|CA024600 HZ49M08r HZ Hordeum vulgare subsp. v... 377 e-103
gb|CV057878.1|CV057878 BNEL31g9 Barley EST endosperm librar... 377 e-103
gb|CK122869.1|CK122869 BES1824106g21 BES1824 Hordeum vulgar... 377 e-103
gb|CK124871.1|CK124871 BES1824110k21 BES1824 Hordeum vulgar... 377 e-103
gb|CK125547.1|CK125547 BES1824109a09 BES1824 Hordeum vulgar... 377 e-103
gb|CK125663.1|CK125663 BES1824109k10 BES1824 Hordeum vulgar... 377 e-103
gb|CV056251.1|CV056251 BNEL15F3 Barley EST endosperm librar... 375 e-102
gb|CV061292.1|CV061292 BNEL67b3 Barley EST endosperm librar... 375 e-102
gb|CV064057.1|CV064057 BNEL96h4 Barley EST endosperm librar... 375 e-102
gb|AV916786.1|AV916786 AV916786 K. Sato unpublished cDNA li... 373 e-102
gb|BM368848.2|BM368848 EBem08_SQ004_M09_R embryo, 40 DPA, n... 373 e-102
gb|BQ768604.1|BQ768604 EBro08_SQ012_M03_R root, 3 week, dro... 373 e-102
gb|BU988528.1|BU988528 HF17O10r HF Hordeum vulgare subsp. v... 373 e-102
gb|BF622691.2|BF622691 HVSMEa0007O05f Hordeum vulgare seedl... 369 e-100
gb|BG418184.2|BG418184 HVSMEk0021M15f Hordeum vulgare testa... 369 e-100
gb|BM377572.2|BM377572 EBem04_SQ003_I19_R embryo, 12 DPA, n... 367 e-100
gb|BI780201.2|BI780201 EBma08_SQ001_L02_R maternal, 28 DPA,... 367 e-100
gb|BU997207.1|BU997207 HI07E02r HI Hordeum vulgare subsp. v... 367 e-100
gb|BU998716.1|BU998716 HI11P08r HI Hordeum vulgare subsp. v... 367 e-100
gb|CA024430.1|CA024430 HZ49E17r HZ Hordeum vulgare subsp. v... 367 e-100
gb|CA030983.1|CA030983 HX08L01r HX Hordeum vulgare subsp. v... 367 e-100
gb|CA033025.1|CA033025 HX14O09r HX Hordeum vulgare subsp. v... 367 e-100
gb|CV058173.1|CV058173 BNEL35b2 Barley EST endosperm librar... 367 e-100
gb|CK125509.1|CK125509 BES1824108n02 BES1824 Hordeum vulgar... 367 e-100
gb|BU990354.1|BU990354 HF24M15r HF Hordeum vulgare subsp. v... 365 2e-099
gb|BJ448795.1|BJ448795 BJ448795 K. Sato unpublished cDNA li... 361 2e-098
gb|BJ461931.1|BJ461931 BJ461931 K. Sato unpublished cDNA li... 361 2e-098
gb|BI777934.2|BI777934 EBro07_SQ001_G05_R root, 3 week, red... 361 2e-098
gb|CK125918.1|CK125918 BES1824111B1g10 BES1824 Hordeum vulg... 359 9e-098
gb|AL503478.1|AL503478 AL503478 Hordeum vulgare Barke roots... 353 6e-096
gb|AL505202.1|AL505202 AL505202 Hordeum vulgare Barke roots... 353 6e-096
gb|BF622318.3|BF622318 HVSMEa0002M02f Hordeum vulgare seedl... 353 6e-096
gb|BF630149.2|BF630149 HVSMEb0008C02f Hordeum vulgare seedl... 353 6e-096
gb|BG343037.2|BG343037 HVSMEg0001N01f Hordeum vulgare pre-a... 353 6e-096
gb|BG417421.2|BG417421 HVSMEk0017E07f Hordeum vulgare testa... 353 6e-096
gb|AV915254.1|AV915254 AV915254 K. Sato unpublished cDNA li... 353 6e-096
gb|AV915379.1|AV915379 AV915379 K. Sato unpublished cDNA li... 353 6e-096
gb|AV917234.1|AV917234 AV917234 K. Sato unpublished cDNA li... 353 6e-096
gb|AV920467.1|AV920467 AV920467 K. Sato unpublished cDNA li... 353 6e-096
gb|AV922400.1|AV922400 AV922400 K. Sato unpublished cDNA li... 353 6e-096
gb|AJ460819.1|AJ460819 AJ460819 S00002 Hordeum vulgare subs... 353 6e-096
gb|BJ464294.1|BJ464294 BJ464294 K. Sato unpublished cDNA li... 353 6e-096
gb|BJ465076.1|BJ465076 BJ465076 K. Sato unpublished cDNA li... 353 6e-096
gb|BJ468185.1|BJ468185 BJ468185 K. Sato unpublished cDNA li... 353 6e-096
gb|BQ459854.1|BQ459854 HA07O12r HA Hordeum vulgare subsp. v... 353 6e-096
gb|BQ460437.1|BQ460437 HA09K01r HA Hordeum vulgare subsp. v... 353 6e-096
gb|BQ462955.1|BQ462955 HI02I20r HI Hordeum vulgare subsp. v... 353 6e-096
gb|BQ464640.1|BQ464640 HF02N13r HF Hordeum vulgare subsp. v... 353 6e-096
gb|BQ464670.1|BQ464670 HF02O22r HF Hordeum vulgare subsp. v... 353 6e-096
gb|BQ464877.1|BQ464877 HU02A07r HU Hordeum vulgare subsp. v... 353 6e-096
gb|BQ472033.1|BQ472033 HV04D12r HV Hordeum vulgare subsp. v... 353 6e-096
gb|BM377623.2|BM377623 EBem04_SQ003_L03_R embryo, 12 DPA, n... 353 6e-096
gb|BM375326.2|BM375326 EBem06_SQ003_A03_R embryo, 21 DPA, n... 353 6e-096
gb|BM370369.2|BM370369 EBro08_SQ004_A02_R root, 3 week, dro... 353 6e-096
gb|BQ754140.1|BQ754140 EBca01_SQ002_P11_R carpel, pre-anthe... 353 6e-096
gb|BQ756722.1|BQ756722 EBem09_SQ003_J04_R embryo, 1 Day ger... 353 6e-096
gb|BQ759287.1|BQ759287 EBpi01_SQ004_G03_R pistil, 1 DPA, no... 353 6e-096
gb|BQ763841.1|BQ763841 EBro03_SQ005_F14_R root, 3 week, wat... 353 6e-096
gb|BQ765568.1|BQ765568 EBro03_SQ007_E18_R root, 3 week, wat... 353 6e-096
gb|BQ768465.1|BQ768465 EBro08_SQ011_E20_R root, 3 week, dro... 353 6e-096
gb|BQ768702.1|BQ768702 EBro08_SQ012_O07_R root, 3 week, dro... 353 6e-096
gb|BU972964.1|BU972964 HB23E24r BC Hordeum vulgare subsp. v... 353 6e-096
gb|BU981690.1|BU981690 HA24F15r HA Hordeum vulgare subsp. v... 353 6e-096
gb|BU986782.1|BU986782 HF12O03r HF Hordeum vulgare subsp. v... 353 6e-096
gb|BU998480.1|BU998480 HI11D05r HI Hordeum vulgare subsp. v... 353 6e-096
gb|CA024815.1|CA024815 HZ50G05r HZ Hordeum vulgare subsp. v... 353 6e-096
gb|CA025351.1|CA025351 HZ51O17r HZ Hordeum vulgare subsp. v... 353 6e-096
gb|CA032252.1|CA032252 HX12H15r HX Hordeum vulgare subsp. v... 353 6e-096
gb|CA032671.1|CA032671 HX13N15r HX Hordeum vulgare subsp. v... 353 6e-096
gb|CB859400.1|CB859400 HI10F12w HI Hordeum vulgare subsp. v... 353 6e-096
gb|CD663328.1|CD663328 UCRHV18_05af01_b1 Drought-stressed D... 353 6e-096
gb|CV053500.1|CV053500 BNEL100a11 Barley EST endosperm libr... 353 6e-096
gb|CV056511.1|CV056511 BNEL18E9 Barley EST endosperm librar... 353 6e-096
gb|CV058152.1|CV058152 BNEL34h4 Barley EST endosperm librar... 353 6e-096
gb|CV059167.1|CV059167 BNEL45b12 Barley EST endosperm libra... 353 6e-096
gb|CK123164.1|CK123164 BES1824102f04 BES1824 Hordeum vulgar... 353 6e-096
gb|CK123501.1|CK123501 BES1824104d16 BES1824 Hordeum vulgar... 353 6e-096
gb|CK124476.1|CK124476 BES1824109f02 BES1824 Hordeum vulgar... 353 6e-096
gb|CK125596.1|CK125596 BES1824109c13 BES1824 Hordeum vulgar... 353 6e-096
gb|BE603260.3|BE603260 HVSMEh0102N08f Hordeum vulgare 5-45 ... 351 2e-095
gb|BF630633.2|BF630633 HVSMEb0012G16f Hordeum vulgare seedl... 349 9e-095
gb|BJ466227.1|BJ466227 BJ466227 K. Sato unpublished cDNA li... 349 9e-095
gb|AV913593.1|AV913593 AV913593 K. Sato unpublished cDNA li... 347 4e-094
gb|BF621942.2|BF621942 HVSMEa0001F14f Hordeum vulgare seedl... 345 1e-093
gb|BJ450451.1|BJ450451 BJ450451 K. Sato unpublished cDNA li... 345 1e-093
gb|BJ466736.1|BJ466736 BJ466736 K. Sato unpublished cDNA li... 345 1e-093
gb|BQ460520.1|BQ460520 HA09D24r HA Hordeum vulgare subsp. v... 345 1e-093
gb|BQ765732.1|BQ765732 EBro03_SQ008_C04_R root, 3 week, wat... 345 1e-093
gb|CK122606.1|CK122606 BES1824104j19 BES1824 Hordeum vulgar... 345 1e-093
gb|BM377930.2|BM377930 EBem04_SQ004_K02_R embryo, 12 DPA, n... 343 6e-093
gb|AV922083.1|AV922083 AV922083 K. Sato unpublished cDNA li... 339 9e-092
gb|BQ762839.1|BQ762839 EBro02_SQ006_C11_R root, 3 week, hyd... 339 9e-092
gb|CK124279.1|CK124279 BES1824108d22 BES1824 Hordeum vulgar... 339 9e-092
gb|BM441169.2|BM441169 EBed02_SQ002_K01_R endosperm, 8 DPA,... 337 3e-091
gb|CA022578.1|CA022578 HZ43K24r HZ Hordeum vulgare subsp. v... 337 3e-091
gb|CV061565.1|CV061565 BNEL6D3 Barley EST endosperm library... 337 3e-091
gb|BI950470.1|BI950470 HVSMEl0020N16f Hordeum vulgare spike... 335 1e-090
gb|AJ460822.1|AJ460822 AJ460822 S00002 Hordeum vulgare subs... 333 5e-090
gb|BQ665195.1|BQ665195 HX02I03u HX Hordeum vulgare subsp. v... 333 5e-090
gb|BM443737.2|BM443737 EBem09_SQ001_F10_R embryo, 1 Day ger... 333 5e-090
gb|BJ460221.1|BJ460221 BJ460221 K. Sato unpublished cDNA li... 331 2e-089
gb|AV918895.1|AV918895 AV918895 K. Sato unpublished cDNA li... 325 1e-087
gb|BQ657042.1|BQ657042 HA09O16u HA Hordeum vulgare subsp. v... 325 1e-087
gb|BQ665669.1|BQ665669 HX04K05u HX Hordeum vulgare subsp. v... 325 1e-087
gb|BI776258.2|BI776258 EBem04_SQ001_E01_R embryo, 12 DPA, n... 325 1e-087
gb|BU999985.1|BU999985 HS16H05u HS Hordeum vulgare subsp. v... 325 1e-087
gb|BQ657178.1|BQ657178 HA09G03u HA Hordeum vulgare subsp. v... 321 2e-086
gb|BQ756838.1|BQ756838 EBem09_SQ003_O14_R embryo, 1 Day ger... 321 2e-086
gb|CB875835.1|CB875835 HX09H19w HX Hordeum vulgare subsp. v... 321 2e-086
gb|CA025982.1|CA025982 HZ53L16r HZ Hordeum vulgare subsp. v... 317 3e-085
gb|BF258438.2|BF258438 HVSMEf0015L15f Hordeum vulgare seedl... 311 2e-083
gb|BE454148.2|BE454148 HVSMEh0093A06f Hordeum vulgare 5-45 ... 311 2e-083
gb|BQ664657.1|BQ664657 HV04D12u HV Hordeum vulgare subsp. v... 311 2e-083
gb|AV928447.1|AV928447 AV928447 K. Sato unpublished cDNA li... 307 3e-082
gb|BI779839.2|BI779839 EBem07_SQ001_C19_R embryo, 28 DPA, n... 305 1e-081
gb|BU983034.1|BU983034 HA28F17r HA Hordeum vulgare subsp. v... 305 1e-081
gb|BF263744.2|BF263744 HV_CEa0007I19f Hordeum vulgare seedl... 303 5e-081
gb|CA000463.1|CA000463 HS08E13u HS Hordeum vulgare subsp. v... 303 5e-081
gb|BI947404.1|BI947404 HVSMEl0005G01f Hordeum vulgare spike... 299 7e-080
gb|AJ460821.1|AJ460821 AJ460821 S00002 Hordeum vulgare subs... 299 7e-080
gb|BI948265.1|BI948265 HVSMEl0008M19f Hordeum vulgare spike... 297 3e-079
gb|AJ460820.1|AJ460820 AJ460820 S00002 Hordeum vulgare subs... 293 5e-078
gb|BJ463961.1|BJ463961 BJ463961 K. Sato unpublished cDNA li... 291 2e-077
gb|BM097625.2|BM097625 EBem04_SQ002_E01_R embryo, 12 DPA, n... 287 3e-076
gb|CB875564.1|CB875564 HX08L01w HX Hordeum vulgare subsp. v... 287 3e-076
gb|BQ664931.1|BQ664931 HX01H05w HX Hordeum vulgare subsp. v... 285 1e-075
gb|BM098910.2|BM098910 EBpi05_SQ002_G14_R pistil, 8 DPA, no... 285 1e-075
gb|AJ460816.1|AJ460816 AJ460816 S00002 Hordeum vulgare subs... 281 2e-074
gb|BE193474.3|BE193474 HVSMEh0081C18f Hordeum vulgare 5-45 ... 278 3e-073
gb|BE602817.3|BE602817 HVSMEh0101O07f Hordeum vulgare 5-45 ... 278 3e-073
gb|BU986373.1|BU986373 HF11K01r HF Hordeum vulgare subsp. v... 278 3e-073
gb|BM369597.2|BM369597 EBem07_SQ004_B09_R embryo, 28 DPA, n... 272 2e-071
gb|BM373875.2|BM373875 EBma03_SQ002_P24_R maternal, 8 DPA, ... 270 7e-071
gb|BI776367.2|BI776367 EBpi05_SQ001_A03_R pistil, 8 DPA, no... 270 7e-071
gb|BQ767678.1|BQ767678 EBro08_SQ009_F13_R root, 3 week, dro... 270 7e-071
gb|BU976534.1|BU976534 HA03N22r HA Hordeum vulgare subsp. v... 270 7e-071
gb|BU978380.1|BU978380 HA13B01r HA Hordeum vulgare subsp. v... 270 7e-071
gb|BU979803.1|BU979803 HA17G05r HA Hordeum vulgare subsp. v... 270 7e-071
gb|CA027672.1|CA027672 HZ59K16r HZ Hordeum vulgare subsp. v... 270 7e-071
gb|CA027926.1|CA027926 HZ60H10r HZ Hordeum vulgare subsp. v... 266 1e-069
gb|BM444825.1|BM444825 EBem09_SQ006_J13_R embryo, 1 Day ger... 264 4e-069
gb|BU978918.1|BU978918 HA14K07r HA Hordeum vulgare subsp. v... 264 4e-069
gb|CA026796.1|CA026796 HZ56P21r HZ Hordeum vulgare subsp. v... 264 4e-069
gb|CV062427.1|CV062427 BNEL79h6 Barley EST endosperm librar... 264 4e-069
gb|AL510481.1|AL510481 AL510481 Hordeum vulgare Barke devel... 262 2e-068
gb|CA027999.1|CA027999 HZ60L02r HZ Hordeum vulgare subsp. v... 262 2e-068
gb|BM377126.2|BM377126 EBem05_SQ004_D08_R embryo, 14 DPA, n... 260 6e-068
gb|BQ768414.1|BQ768414 EBro08_SQ011_L13_R root, 3 week, dro... 258 3e-067
gb|AL502477.1|AL502477 AL502477 Hordeum vulgare Barke roots... 254 4e-066
gb|BM377688.2|BM377688 EBem04_SQ003_O05_R embryo, 12 DPA, n... 252 2e-065
gb|BQ656284.1|BQ656284 HA05A22u HA Hordeum vulgare subsp. v... 246 1e-063
gb|BM100925.2|BM100925 EBpi01_SQ002_G05_R pistil, 1 DPA, no... 246 1e-063
gb|CA000192.1|CA000192 HS09J10u HS Hordeum vulgare subsp. v... 246 1e-063
gb|CA018086.1|CA018086 HV07G17r HV Hordeum vulgare subsp. v... 246 1e-063
gb|CA030656.1|CA030656 HX07L14r HX Hordeum vulgare subsp. v... 246 1e-063
gb|CB858495.1|CB858495 HI07E02w HI Hordeum vulgare subsp. v... 246 1e-063
gb|CB875248.1|CB875248 HX07L14w HX Hordeum vulgare subsp. v... 246 1e-063
gb|BM096712.2|BM096712 EBma07_SQ001_F17_R maternal, 21 DPA,... 242 2e-062
gb|AV920357.1|AV920357 AV920357 K. Sato unpublished cDNA li... 240 6e-062
gb|AL500887.1|AL500887 AL500887 Hordeum vulgare Barke roots... 230 6e-059
gb|AJ460815.1|AJ460815 AJ460815 S00002 Hordeum vulgare subs... 228 2e-058
gb|CA027551.1|CA027551 HZ59E14r HZ Hordeum vulgare subsp. v... 228 2e-058
gb|BU998210.1|BU998210 HI10F12r HI Hordeum vulgare subsp. v... 226 9e-058
gb|BI777549.2|BI777549 EBro04_SQ001_I24_R root, 3 week, sal... 224 4e-057
gb|BQ753921.1|BQ753921 EBca01_SQ002_E11_R carpel, pre-anthe... 218 2e-055
gb|BQ469761.1|BQ469761 HZ01M19r HZ Hordeum vulgare subsp. v... 214 3e-054
gb|BQ469989.1|BQ469989 HX01H05T HX Hordeum vulgare subsp. v... 214 3e-054
gb|BE194261.3|BE194261 HVSMEh0084O12f Hordeum vulgare 5-45 ... 210 5e-053
gb|AJ460814.1|AJ460814 AJ460814 S00002 Hordeum vulgare subs... 208 2e-052
gb|CB859670.1|CB859670 HI11D05w HI Hordeum vulgare subsp. v... 206 8e-052
gb|AJ460823.1|AJ460823 AJ460823 S00002 Hordeum vulgare subs... 204 3e-051
gb|BQ657557.1|BQ657557 HA07O12u HA Hordeum vulgare subsp. v... 204 3e-051
gb|CA004069.1|CA004069 HS16H05r HS Hordeum vulgare subsp. v... 202 1e-050
gb|CA002703.1|CA002703 HS08E13r HS Hordeum vulgare subsp. v... 198 2e-049
gb|BM368401.2|BM368401 EBem08_SQ002_B19_R embryo, 40 DPA, n... 194 3e-048
gb|BU980183.1|BU980183 HA18O19r HA Hordeum vulgare subsp. v... 190 5e-047
gb|BQ458661.1|BQ458661 HA04J08r HA Hordeum vulgare subsp. v... 186 8e-046
gb|BM375464.2|BM375464 EBem06_SQ003_G24_R embryo, 21 DPA, n... 184 3e-045
gb|CA025726.1|CA025726 HZ52P14r HZ Hordeum vulgare subsp. v... 182 1e-044
gb|BQ657201.1|BQ657201 HA09D24u HA Hordeum vulgare subsp. v... 180 5e-044
gb|BQ756406.1|BQ756406 EBem08_SQ002_J20_R embryo, 40 DPA, n... 178 2e-043
gb|BQ756688.1|BQ756688 EBem09_SQ003_H11_R embryo, 1 Day ger... 176 7e-043
gb|BU976535.1|BU976535 HA03N22u HA Hordeum vulgare subsp. v... 176 7e-043
gb|CA031274.1|CA031274 HX09H19r HX Hordeum vulgare subsp. v... 174 3e-042
gb|AJ460824.1|AJ460824 AJ460824 S00002 Hordeum vulgare subs... 170 5e-041
gb|BQ472094.1|BQ472094 HV04G07r HV Hordeum vulgare subsp. v... 170 5e-041
gb|BQ467594.1|BQ467594 HS04E15r HS Hordeum vulgare subsp. v... 165 3e-039
gb|CA012155.1|CA012155 HT04J18r HT Hordeum vulgare subsp. v... 165 3e-039
gb|CK123401.1|CK123401 BES1824103n20 BES1824 Hordeum vulgar... 159 2e-037
gb|BM371273.2|BM371273 EBma08_SQ002_B15_R maternal, 28 DPA,... 157 7e-037
gb|BJ458873.1|BJ458873 BJ458873 K. Sato unpublished cDNA li... 155 3e-036
gb|BQ756631.1|BQ756631 EBem09_SQ003_E17_R embryo, 1 Day ger... 155 3e-036
gb|AJ460817.1|AJ460817 AJ460817 S00002 Hordeum vulgare subs... 153 1e-035
gb|BQ756371.1|BQ756371 EBem08_SQ001_L10_R embryo, 40 DPA, n... 153 1e-035
gb|BQ757340.1|BQ757340 EBem10_SQ003_M17_R embryo, 2 Day ger... 151 4e-035
gb|BM100908.2|BM100908 EBpi01_SQ002_F12_R pistil, 1 DPA, no... 149 2e-034
gb|AV916684.1|AV916684 AV916684 K. Sato unpublished cDNA li... 147 7e-034
gb|AV921977.1|AV921977 AV921977 K. Sato unpublished cDNA li... 147 7e-034
gb|BE230916.1|BE230916 HVSMEg0001I22f Hordeum vulgare pre-a... 137 6e-031
gb|BQ757419.1|BQ757419 EBem10_SQ004_B05_R embryo, 2 Day ger... 135 3e-030
gb|CA003359.1|CA003359 HS14D05r HS Hordeum vulgare subsp. v... 127 6e-028
gb|CB859900.1|CB859900 HI11P08w HI Hordeum vulgare subsp. v... 123 1e-026
gb|AJ433501.1|AJ433501 AJ433501 S00002 Hordeum vulgare subs... 121 4e-026
gb|AJ460818.1|AJ460818 AJ460818 S00002 Hordeum vulgare subs... 119 2e-025
gb|BQ759467.1|BQ759467 EBpi01_SQ004_I13_R pistil, 1 DPA, no... 119 2e-025
gb|BM369611.1|BM369611 EBem07_SQ004_C01_R embryo, 28 DPA, n... 109 1e-022
gb|BM369630.1|BM369630 EBem07_SQ004_C20_R embryo, 28 DPA, n... 109 1e-022
gb|BJ457869.1|BJ457869 BJ457869 K. Sato unpublished cDNA li... 103 9e-021
gb|BJ451377.1|BJ451377 BJ451377 K. Sato unpublished cDNA li... 101 4e-020
gb|BQ657114.1|BQ657114 HA09K01u HA Hordeum vulgare subsp. v... 101 4e-020
gb|AJ460064.1|AJ460064 AJ460064 S00002 Hordeum vulgare subs... 100 1e-019
gb|BQ459725.1|BQ459725 HA08E12r HA Hordeum vulgare subsp. v... 94 9e-018
gb|BQ657458.1|BQ657458 HA08E12u HA Hordeum vulgare subsp. v... 94 9e-018
gb|BQ762673.1|BQ762673 EBro02_SQ004_N18 _R root, 3 week, hy... 94 9e-018
gb|CV057201.1|CV057201 BNEL25b2 Barley EST endosperm librar... 76 2e-012
gb|BE230898.1|BE230898 HVSMEg0001I10f Hordeum vulgare pre-a... 46 0.002
gb|BM376133.1|BM376133 EBma01_SQ002_H07_R maternal, 4 DPA, ... 42 0.028
gb|BM928833.1|BM928833 LP10006 Lemma/palea-enriched cDNA li... 40 0.11
gb|BM928834.1|BM928834 LP10007 Lemma/palea-enriched cDNA li... 40 0.11
gb|BM928843.1|BM928843 LP10030 Lemma/palea-enriched cDNA li... 40 0.11
gb|BM928858.1|BM928858 LP20059 Lemma/palea-enriched cDNA li... 40 0.11
gb|BQ134670.1|BQ134670 LP30108 Lemma/palea-enriched cDNA li... 40 0.11
gb|BQ134683.1|BQ134683 LP30159 Lemma/palea-enriched cDNA li... 40 0.11
gb|BM376088.2|BM376088 EBma01_SQ002_F01_R maternal, 4 DPA, ... 40 0.11
gb|BM376094.2|BM376094 EBma01_SQ002_F09_R maternal, 4 DPA, ... 40 0.11
gb|BM371381.2|BM371381 EBma08_SQ002_I05_R maternal, 28 DPA,... 40 0.11
gb|BM371382.2|BM371382 EBma08_SQ002_I06_R maternal, 28 DPA,... 40 0.11
gb|BM371429.2|BM371429 EBma08_SQ002_L04_R maternal, 28 DPA,... 40 0.11
gb|BQ764180.1|BQ764180 EBan01_SQ005_I01_R anther, yellow st... 40 0.11
gb|CD240764.1|CD240764 LP30021 Lemma/palea-enriched cDNA li... 40 0.11
gb|BM928867.1|BM928867 LP300020 Lemma/palea-enriched cDNA l... 38 0.44
>gb|BI947504.1|BI947504 HVSMEl0005L08f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0005L08f, mRNA sequence
Length = 505
Score = 377 bits (190), Expect = e-103
Identities = 410/482 (85%), Gaps = 1/482 (0%)
Strand = Plus / Minus
Query: 301 ggctgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtacacagag 360
||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| | |
Sbjct: 491 ggctgcctgttcttcttcttgaccccagacttggaaacctggaggctgcggtacactgcg 432
Query: 361 ctcagcctaccaagggccgacttggtcagatcaggcctgtaatagttgtcgccaacctgg 420
|||||||| ||||||||| ||||||||| ||||||||||| |||||||||| ||||||
Sbjct: 431 ctcagccttgcaagggccggcttggtcaggtcaggcctgtagtagttgtcgcatacctgg 372
Query: 421 tttttcacagccttggccatcttgcggaactccttgcgcattacagacttgtggctgagc 480
|| || |||| |||||||||||||||||||||||||||||| | || |||||| ||||
Sbjct: 371 ttcttgacagacttggccatcttgcggaactccttgcgcatcagagtcttgtgctggagc 312
Query: 481 ttcgcgggtgtgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt 540
|| || || ||||||||||||||||||||||| || || ||||| |||||| ||||| |
Sbjct: 311 ttggcaggggtgttctgcttcttggtcttggtcgtggacaggacgacagccttgtcctct 252
Query: 541 ccagcagctggctggatcgttacagttttcttgtttgctaagccagagtacttgtaggag 600
|| || | |||||||| | || || || |||| || ||||| ||| |||||||||||
Sbjct: 251 cccgctgatggctggacagccacggtcttgctgttcgccaagcccgagaacttgtaggag 192
Query: 601 tgtacattgtagaggttgttgggctccttggtgaactgcaccttggcattgccgttgcca 660
|| ||||||||||||||||||||||||||| ||||||| |||||||| |||| ||||||
Sbjct: 191 tggacattgtagaggttgttgggctccttgctgaactgtaccttggcgttgctgttgccg 132
Query: 661 aactgcttcaccaggaaggagttgttcttcctcacaatctgccagatcagatcccctgga 720
|||||||| | || |||| ||||||||||| |||| | || ||||| |||| || |||
Sbjct: 131 aactgcttgatcaagaagcagttgttcttcttcacgagctcccagaccagagatcccgga 72
Query: 721 acggtcgccatttcccttcgccggagatgaggt-gcctcggcgtcgcctcgctctgttcc 779
||||| | |||||||||| |||||||||||||| ||| ||||| ||||| |||||| |||
Sbjct: 71 acggtagtcatttcccttggccggagatgaggtcgccgcggcgccgccttgctctgctcc 12
Query: 780 gg 781
||
Sbjct: 11 gg 10
>gb|BF263745.3|BF263745 HV_CEa0007I20f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0007I20f, mRNA sequence
Length = 672
Score = 377 bits (190), Expect = e-103
Identities = 410/482 (85%), Gaps = 1/482 (0%)
Strand = Plus / Minus
Query: 301 ggctgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtacacagag 360
||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| | |
Sbjct: 489 ggctgcctgttcttcttcttgaccccagacttggaaacctggaggctgcggtacactgcg 430
Query: 361 ctcagcctaccaagggccgacttggtcagatcaggcctgtaatagttgtcgccaacctgg 420
|||||||| ||||||||| ||||||||| ||||||||||| |||||||||| ||||||
Sbjct: 429 ctcagccttgcaagggccggcttggtcaggtcaggcctgtagtagttgtcgcatacctgg 370
Query: 421 tttttcacagccttggccatcttgcggaactccttgcgcattacagacttgtggctgagc 480
|| || |||| |||||||||||||||||||||||||||||| | || |||||| ||||
Sbjct: 369 ttcttgacagacttggccatcttgcggaactccttgcgcatcagagtcttgtgctggagc 310
Query: 481 ttcgcgggtgtgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt 540
|| || || ||||||||||||||||||||||| || || ||||| |||||| ||||| |
Sbjct: 309 ttggcaggggtgttctgcttcttggtcttggtcgtggacaggacgacagccttgtcctct 250
Query: 541 ccagcagctggctggatcgttacagttttcttgtttgctaagccagagtacttgtaggag 600
|| || | |||||||| | || || || |||| || ||||| ||| |||||||||||
Sbjct: 249 cccgctgatggctggacagccacggtcttgctgttcgccaagcccgagaacttgtaggag 190
Query: 601 tgtacattgtagaggttgttgggctccttggtgaactgcaccttggcattgccgttgcca 660
|| ||||||||||||||||||||||||||| ||||||| |||||||| |||| ||||||
Sbjct: 189 tggacattgtagaggttgttgggctccttgctgaactgtaccttggcgttgctgttgccg 130
Query: 661 aactgcttcaccaggaaggagttgttcttcctcacaatctgccagatcagatcccctgga 720
|||||||| | || |||| ||||||||||| |||| | || ||||| |||| || |||
Sbjct: 129 aactgcttgatcaagaagcagttgttcttcttcacgagctcccagaccagagatcccgga 70
Query: 721 acggtcgccatttcccttcgccggagatgaggt-gcctcggcgtcgcctcgctctgttcc 779
||||| | |||||||||| |||||||||||||| ||| ||||| ||||| |||||| |||
Sbjct: 69 acggtagtcatttcccttggccggagatgaggtcgccgcggcgccgccttgctctgctcc 10
Query: 780 gg 781
||
Sbjct: 9 gg 8
>gb|BQ458499.1|BQ458499 HA05A22r HA Hordeum vulgare subsp. vulgare cDNA clone HA05A22
5-PRIME, mRNA sequence
Length = 521
Score = 377 bits (190), Expect = e-103
Identities = 410/482 (85%), Gaps = 1/482 (0%)
Strand = Plus / Minus
Query: 301 ggctgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtacacagag 360
||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| | |
Sbjct: 501 ggctgcctgttcttcttcttgaccccagacttggaaacctggaggctgcggtacactgcg 442
Query: 361 ctcagcctaccaagggccgacttggtcagatcaggcctgtaatagttgtcgccaacctgg 420
|||||||| ||||||||| ||||||||| ||||||||||| |||||||||| ||||||
Sbjct: 441 ctcagccttgcaagggccggcttggtcaggtcaggcctgtagtagttgtcgcatacctgg 382
Query: 421 tttttcacagccttggccatcttgcggaactccttgcgcattacagacttgtggctgagc 480
|| || |||| |||||||||||||||||||||||||||||| | || |||||| ||||
Sbjct: 381 ttcttgacagacttggccatcttgcggaactccttgcgcatcagagtcttgtgctggagc 322
Query: 481 ttcgcgggtgtgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt 540
|| || || ||||||||||||||||||||||| || || ||||| |||||| ||||| |
Sbjct: 321 ttggcaggggtgttctgcttcttggtcttggtcgtggacaggacgacagccttgtcctct 262
Query: 541 ccagcagctggctggatcgttacagttttcttgtttgctaagccagagtacttgtaggag 600
|| || | |||||||| | || || || |||| || ||||| ||| |||||||||||
Sbjct: 261 cccgctgatggctggacagccacggtcttgctgttcgccaagcccgagaacttgtaggag 202
Query: 601 tgtacattgtagaggttgttgggctccttggtgaactgcaccttggcattgccgttgcca 660
|| ||||||||||||||||||||||||||| ||||||| |||||||| |||| ||||||
Sbjct: 201 tggacattgtagaggttgttgggctccttgctgaactgtaccttggcgttgctgttgccg 142
Query: 661 aactgcttcaccaggaaggagttgttcttcctcacaatctgccagatcagatcccctgga 720
|||||||| | || |||| ||||||||||| |||| | || ||||| |||| || |||
Sbjct: 141 aactgcttgatcaagaagcagttgttcttcttcacgagctcccagaccagagatcccgga 82
Query: 721 acggtcgccatttcccttcgccggagatgaggt-gcctcggcgtcgcctcgctctgttcc 779
||||| | |||||||||| |||||||||||||| ||| ||||| ||||| |||||| |||
Sbjct: 81 acggtagtcatttcccttggccggagatgaggtcgccgcggcgccgccttgctctgctcc 22
Query: 780 gg 781
||
Sbjct: 21 gg 20
>gb|BQ460364.1|BQ460364 HA09O16r HA Hordeum vulgare subsp. vulgare cDNA clone HA09O16
5-PRIME, mRNA sequence
Length = 587
Score = 377 bits (190), Expect = e-103
Identities = 410/482 (85%), Gaps = 1/482 (0%)
Strand = Plus / Minus
Query: 301 ggctgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtacacagag 360
||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| | |
Sbjct: 507 ggctgcctgttcttcttcttgaccccagacttggaaacctggaggctgcggtacactgcg 448
Query: 361 ctcagcctaccaagggccgacttggtcagatcaggcctgtaatagttgtcgccaacctgg 420
|||||||| ||||||||| ||||||||| ||||||||||| |||||||||| ||||||
Sbjct: 447 ctcagccttgcaagggccggcttggtcaggtcaggcctgtagtagttgtcgcatacctgg 388
Query: 421 tttttcacagccttggccatcttgcggaactccttgcgcattacagacttgtggctgagc 480
|| || |||| |||||||||||||||||||||||||||||| | || |||||| ||||
Sbjct: 387 ttcttgacagacttggccatcttgcggaactccttgcgcatcagagtcttgtgctggagc 328
Query: 481 ttcgcgggtgtgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt 540
|| || || ||||||||||||||||||||||| || || ||||| |||||| ||||| |
Sbjct: 327 ttggcaggggtgttctgcttcttggtcttggtcgtggacaggacgacagccttgtcctct 268
Query: 541 ccagcagctggctggatcgttacagttttcttgtttgctaagccagagtacttgtaggag 600
|| || | |||||||| | || || || |||| || ||||| ||| |||||||||||
Sbjct: 267 cccgctgatggctggacagccacggtcttgctgttcgccaagcccgagaacttgtaggag 208
Query: 601 tgtacattgtagaggttgttgggctccttggtgaactgcaccttggcattgccgttgcca 660
|| ||||||||||||||||||||||||||| ||||||| |||||||| |||| ||||||
Sbjct: 207 tggacattgtagaggttgttgggctccttgctgaactgtaccttggcgttgctgttgccg 148
Query: 661 aactgcttcaccaggaaggagttgttcttcctcacaatctgccagatcagatcccctgga 720
|||||||| | || |||| ||||||||||| |||| | || ||||| |||| || |||
Sbjct: 147 aactgcttgatcaagaagcagttgttcttcttcacgagctcccagaccagagatcccgga 88
Query: 721 acggtcgccatttcccttcgccggagatgaggt-gcctcggcgtcgcctcgctctgttcc 779
||||| | |||||||||| |||||||||||||| ||| ||||| ||||| |||||| |||
Sbjct: 87 acggtagtcatttcccttggccggagatgaggtcgccgcggcgccgccttgctctgctcc 28
Query: 780 gg 781
||
Sbjct: 27 gg 26
>gb|BQ460503.1|BQ460503 HA09G03r HA Hordeum vulgare subsp. vulgare cDNA clone HA09G03
5-PRIME, mRNA sequence
Length = 559
Score = 377 bits (190), Expect = e-103
Identities = 410/482 (85%), Gaps = 1/482 (0%)
Strand = Plus / Minus
Query: 301 ggctgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtacacagag 360
||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| | |
Sbjct: 507 ggctgcctgttcttcttcttgaccccagacttggaaacctggaggctgcggtacactgcg 448
Query: 361 ctcagcctaccaagggccgacttggtcagatcaggcctgtaatagttgtcgccaacctgg 420
|||||||| ||||||||| ||||||||| ||||||||||| |||||||||| ||||||
Sbjct: 447 ctcagccttgcaagggccggcttggtcaggtcaggcctgtagtagttgtcgcatacctgg 388
Query: 421 tttttcacagccttggccatcttgcggaactccttgcgcattacagacttgtggctgagc 480
|| || |||| |||||||||||||||||||||||||||||| | || |||||| ||||
Sbjct: 387 ttcttgacagacttggccatcttgcggaactccttgcgcatcagagtcttgtgctggagc 328
Query: 481 ttcgcgggtgtgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt 540
|| || || ||||||||||||||||||||||| || || ||||| |||||| ||||| |
Sbjct: 327 ttggcaggggtgttctgcttcttggtcttggtcgtggacaggacgacagccttgtcctct 268
Query: 541 ccagcagctggctggatcgttacagttttcttgtttgctaagccagagtacttgtaggag 600
|| || | |||||||| | || || || |||| || ||||| ||| |||||||||||
Sbjct: 267 cccgctgatggctggacagccacggtcttgctgttcgccaagcccgagaacttgtaggag 208
Query: 601 tgtacattgtagaggttgttgggctccttggtgaactgcaccttggcattgccgttgcca 660
|| ||||||||||||||||||||||||||| ||||||| |||||||| |||| ||||||
Sbjct: 207 tggacattgtagaggttgttgggctccttgctgaactgtaccttggcgttgctgttgccg 148
Query: 661 aactgcttcaccaggaaggagttgttcttcctcacaatctgccagatcagatcccctgga 720
|||||||| | || |||| ||||||||||| |||| | || ||||| |||| || |||
Sbjct: 147 aactgcttgatcaagaagcagttgttcttcttcacgagctcccagaccagagatcccgga 88
Query: 721 acggtcgccatttcccttcgccggagatgaggt-gcctcggcgtcgcctcgctctgttcc 779
||||| | |||||||||| |||||||||||||| ||| ||||| ||||| |||||| |||
Sbjct: 87 acggtagtcatttcccttggccggagatgaggtcgccgcggcgccgccttgctctgctcc 28
Query: 780 gg 781
||
Sbjct: 27 gg 26
>gb|BQ470988.1|BQ470988 HX04K05r HX Hordeum vulgare subsp. vulgare cDNA clone HX04K05
5-PRIME, mRNA sequence
Length = 644
Score = 377 bits (190), Expect = e-103
Identities = 410/482 (85%), Gaps = 1/482 (0%)
Strand = Plus / Minus
Query: 301 ggctgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtacacagag 360
||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| | |
Sbjct: 508 ggctgcctgttcttcttcttgaccccagacttggaaacctggaggctgcggtacactgcg 449
Query: 361 ctcagcctaccaagggccgacttggtcagatcaggcctgtaatagttgtcgccaacctgg 420
|||||||| ||||||||| ||||||||| ||||||||||| |||||||||| ||||||
Sbjct: 448 ctcagccttgcaagggccggcttggtcaggtcaggcctgtagtagttgtcgcatacctgg 389
Query: 421 tttttcacagccttggccatcttgcggaactccttgcgcattacagacttgtggctgagc 480
|| || |||| |||||||||||||||||||||||||||||| | || |||||| ||||
Sbjct: 388 ttcttgacagacttggccatcttgcggaactccttgcgcatcagagtcttgtgctggagc 329
Query: 481 ttcgcgggtgtgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt 540
|| || || ||||||||||||||||||||||| || || ||||| |||||| ||||| |
Sbjct: 328 ttggcaggggtgttctgcttcttggtcttggtcgtggacaggacgacagccttgtcctct 269
Query: 541 ccagcagctggctggatcgttacagttttcttgtttgctaagccagagtacttgtaggag 600
|| || | |||||||| | || || || |||| || ||||| ||| |||||||||||
Sbjct: 268 cccgctgatggctggacagccacggtcttgctgttcgccaagcccgagaacttgtaggag 209
Query: 601 tgtacattgtagaggttgttgggctccttggtgaactgcaccttggcattgccgttgcca 660
|| ||||||||||||||||||||||||||| ||||||| |||||||| |||| ||||||
Sbjct: 208 tggacattgtagaggttgttgggctccttgctgaactgtaccttggcgttgctgttgccg 149
Query: 661 aactgcttcaccaggaaggagttgttcttcctcacaatctgccagatcagatcccctgga 720
|||||||| | || |||| ||||||||||| |||| | || ||||| |||| || |||
Sbjct: 148 aactgcttgatcaagaagcagttgttcttcttcacgagctcccagaccagagatcccgga 89
Query: 721 acggtcgccatttcccttcgccggagatgaggt-gcctcggcgtcgcctcgctctgttcc 779
||||| | |||||||||| |||||||||||||| ||| ||||| ||||| |||||| |||
Sbjct: 88 acggtagtcatttcccttggccggagatgaggtcgccgcggcgccgccttgctctgctcc 29
Query: 780 gg 781
||
Sbjct: 28 gg 27
>gb|BM376771.2|BM376771 EBem05_SQ003_D01_R embryo, 14 DPA, no treatment, cv Optic, EBem05
Hordeum vulgare subsp. vulgare cDNA clone
EBem05_SQ003_D01 5', mRNA sequence
Length = 582
Score = 377 bits (190), Expect = e-103
Identities = 410/482 (85%), Gaps = 1/482 (0%)
Strand = Plus / Minus
Query: 301 ggctgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtacacagag 360
||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| | |
Sbjct: 491 ggctgcctgttcttcttcttgaccccagacttggaaacctggaggctgcggtacactgcg 432
Query: 361 ctcagcctaccaagggccgacttggtcagatcaggcctgtaatagttgtcgccaacctgg 420
|||||||| ||||||||| ||||||||| ||||||||||| |||||||||| ||||||
Sbjct: 431 ctcagccttgcaagggccggcttggtcaggtcaggcctgtagtagttgtcgcatacctgg 372
Query: 421 tttttcacagccttggccatcttgcggaactccttgcgcattacagacttgtggctgagc 480
|| || |||| |||||||||||||||||||||||||||||| | || |||||| ||||
Sbjct: 371 ttcttgacagacttggccatcttgcggaactccttgcgcatcagagtcttgtgctggagc 312
Query: 481 ttcgcgggtgtgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt 540
|| || || ||||||||||||||||||||||| || || ||||| |||||| ||||| |
Sbjct: 311 ttggcaggggtgttctgcttcttggtcttggtcgtggacaggacgacagccttgtcctct 252
Query: 541 ccagcagctggctggatcgttacagttttcttgtttgctaagccagagtacttgtaggag 600
|| || | |||||||| | || || || |||| || ||||| ||| |||||||||||
Sbjct: 251 cccgctgatggctggacagccacggtcttgctgttcgccaagcccgagaacttgtaggag 192
Query: 601 tgtacattgtagaggttgttgggctccttggtgaactgcaccttggcattgccgttgcca 660
|| ||||||||||||||||||||||||||| ||||||| |||||||| |||| ||||||
Sbjct: 191 tggacattgtagaggttgttgggctccttgctgaactgtaccttggcgttgctgttgccg 132
Query: 661 aactgcttcaccaggaaggagttgttcttcctcacaatctgccagatcagatcccctgga 720
|||||||| | || |||| ||||||||||| |||| | || ||||| |||| || |||
Sbjct: 131 aactgcttgatcaagaagcagttgttcttcttcacgagctcccagaccagagatcccgga 72
Query: 721 acggtcgccatttcccttcgccggagatgaggt-gcctcggcgtcgcctcgctctgttcc 779
||||| | |||||||||| |||||||||||||| ||| ||||| ||||| |||||| |||
Sbjct: 71 acggtagtcatttcccttggccggagatgaggtcgccgcggcgccgccttgctctgctcc 12
Query: 780 gg 781
||
Sbjct: 11 gg 10
>gb|BM369548.2|BM369548 EBem07_SQ003_O19_R embryo, 28 DPA, no treatment, cv Optic, EBem07
Hordeum vulgare subsp. vulgare cDNA clone
EBem07_SQ003_O19 5', mRNA sequence
Length = 582
Score = 377 bits (190), Expect = e-103
Identities = 410/482 (85%), Gaps = 1/482 (0%)
Strand = Plus / Minus
Query: 301 ggctgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtacacagag 360
||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| | |
Sbjct: 482 ggctgcctgttcttcttcttgaccccagacttggaaacctggaggctgcggtacactgcg 423
Query: 361 ctcagcctaccaagggccgacttggtcagatcaggcctgtaatagttgtcgccaacctgg 420
|||||||| ||||||||| ||||||||| ||||||||||| |||||||||| ||||||
Sbjct: 422 ctcagccttgcaagggccggcttggtcaggtcaggcctgtagtagttgtcgcatacctgg 363
Query: 421 tttttcacagccttggccatcttgcggaactccttgcgcattacagacttgtggctgagc 480
|| || |||| |||||||||||||||||||||||||||||| | || |||||| ||||
Sbjct: 362 ttcttgacagacttggccatcttgcggaactccttgcgcatcagagtcttgtgctggagc 303
Query: 481 ttcgcgggtgtgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt 540
|| || || ||||||||||||||||||||||| || || ||||| |||||| ||||| |
Sbjct: 302 ttggcaggggtgttctgcttcttggtcttggtcgtggacaggacgacagccttgtcctct 243
Query: 541 ccagcagctggctggatcgttacagttttcttgtttgctaagccagagtacttgtaggag 600
|| || | |||||||| | || || || |||| || ||||| ||| |||||||||||
Sbjct: 242 cccgctgatggctggacagccacggtcttgctgttcgccaagcccgagaacttgtaggag 183
Query: 601 tgtacattgtagaggttgttgggctccttggtgaactgcaccttggcattgccgttgcca 660
|| ||||||||||||||||||||||||||| ||||||| |||||||| |||| ||||||
Sbjct: 182 tggacattgtagaggttgttgggctccttgctgaactgtaccttggcgttgctgttgccg 123
Query: 661 aactgcttcaccaggaaggagttgttcttcctcacaatctgccagatcagatcccctgga 720
|||||||| | || |||| ||||||||||| |||| | || ||||| |||| || |||
Sbjct: 122 aactgcttgatcaagaagcagttgttcttcttcacgagctcccagaccagagatcccgga 63
Query: 721 acggtcgccatttcccttcgccggagatgaggt-gcctcggcgtcgcctcgctctgttcc 779
||||| | |||||||||| |||||||||||||| ||| ||||| ||||| |||||| |||
Sbjct: 62 acggtagtcatttcccttggccggagatgaggtcgccgcggcgccgccttgctctgctcc 3
Query: 780 gg 781
||
Sbjct: 2 gg 1
>gb|BM376181.2|BM376181 EBma01_SQ002_J11_R maternal, 4 DPA, no treatment, cv Optic, EBma01
Hordeum vulgare subsp. vulgare cDNA clone
EBma01_SQ002_J11 5', mRNA sequence
Length = 548
Score = 377 bits (190), Expect = e-103
Identities = 410/482 (85%), Gaps = 1/482 (0%)
Strand = Plus / Minus
Query: 301 ggctgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtacacagag 360
||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| | |
Sbjct: 492 ggctgcctgttcttcttcttgaccccagacttggaaacctggaggctgcggtacactgcg 433
Query: 361 ctcagcctaccaagggccgacttggtcagatcaggcctgtaatagttgtcgccaacctgg 420
|||||||| ||||||||| ||||||||| ||||||||||| |||||||||| ||||||
Sbjct: 432 ctcagccttgcaagggccggcttggtcaggtcaggcctgtagtagttgtcgcatacctgg 373
Query: 421 tttttcacagccttggccatcttgcggaactccttgcgcattacagacttgtggctgagc 480
|| || |||| |||||||||||||||||||||||||||||| | || |||||| ||||
Sbjct: 372 ttcttgacagacttggccatcttgcggaactccttgcgcatcagagtcttgtgctggagc 313
Query: 481 ttcgcgggtgtgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt 540
|| || || ||||||||||||||||||||||| || || ||||| |||||| ||||| |
Sbjct: 312 ttggcaggggtgttctgcttcttggtcttggtcgtggacaggacgacagccttgtcctct 253
Query: 541 ccagcagctggctggatcgttacagttttcttgtttgctaagccagagtacttgtaggag 600
|| || | |||||||| | || || || |||| || ||||| ||| |||||||||||
Sbjct: 252 cccgctgatggctggacagccacggtcttgctgttcgccaagcccgagaacttgtaggag 193
Query: 601 tgtacattgtagaggttgttgggctccttggtgaactgcaccttggcattgccgttgcca 660
|| ||||||||||||||||||||||||||| ||||||| |||||||| |||| ||||||
Sbjct: 192 tggacattgtagaggttgttgggctccttgctgaactgtaccttggcgttgctgttgccg 133
Query: 661 aactgcttcaccaggaaggagttgttcttcctcacaatctgccagatcagatcccctgga 720
|||||||| | || |||| ||||||||||| |||| | || ||||| |||| || |||
Sbjct: 132 aactgcttgatcaagaagcagttgttcttcttcacgagctcccagaccagagatcccgga 73
Query: 721 acggtcgccatttcccttcgccggagatgaggt-gcctcggcgtcgcctcgctctgttcc 779
||||| | |||||||||| |||||||||||||| ||| ||||| ||||| |||||| |||
Sbjct: 72 acggtagtcatttcccttggccggagatgaggtcgccgcggcgccgccttgctctgctcc 13
Query: 780 gg 781
||
Sbjct: 12 gg 11
>gb|BM372228.2|BM372228 EBro03_SQ004_G02_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ004_G02 5', mRNA sequence
Length = 582
Score = 377 bits (190), Expect = e-103
Identities = 410/482 (85%), Gaps = 1/482 (0%)
Strand = Plus / Minus
Query: 301 ggctgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtacacagag 360
||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| | |
Sbjct: 498 ggctgcctgttcttcttcttgaccccagacttggaaacctggaggctgcggtacactgcg 439
Query: 361 ctcagcctaccaagggccgacttggtcagatcaggcctgtaatagttgtcgccaacctgg 420
|||||||| ||||||||| ||||||||| ||||||||||| |||||||||| ||||||
Sbjct: 438 ctcagccttgcaagggccggcttggtcaggtcaggcctgtagtagttgtcgcatacctgg 379
Query: 421 tttttcacagccttggccatcttgcggaactccttgcgcattacagacttgtggctgagc 480
|| || |||| |||||||||||||||||||||||||||||| | || |||||| ||||
Sbjct: 378 ttcttgacagacttggccatcttgcggaactccttgcgcatcagagtcttgtgctggagc 319
Query: 481 ttcgcgggtgtgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt 540
|| || || ||||||||||||||||||||||| || || ||||| |||||| ||||| |
Sbjct: 318 ttggcaggggtgttctgcttcttggtcttggtcgtggacaggacgacagccttgtcctct 259
Query: 541 ccagcagctggctggatcgttacagttttcttgtttgctaagccagagtacttgtaggag 600
|| || | |||||||| | || || || |||| || ||||| ||| |||||||||||
Sbjct: 258 cccgctgatggctggacagccacggtcttgctgttcgccaagcccgagaacttgtaggag 199
Query: 601 tgtacattgtagaggttgttgggctccttggtgaactgcaccttggcattgccgttgcca 660
|| ||||||||||||||||||||||||||| ||||||| |||||||| |||| ||||||
Sbjct: 198 tggacattgtagaggttgttgggctccttgctgaactgtaccttggcgttgctgttgccg 139
Query: 661 aactgcttcaccaggaaggagttgttcttcctcacaatctgccagatcagatcccctgga 720
|||||||| | || |||| ||||||||||| |||| | || ||||| |||| || |||
Sbjct: 138 aactgcttgatcaagaagcagttgttcttcttcacgagctcccagaccagagatcccgga 79
Query: 721 acggtcgccatttcccttcgccggagatgaggt-gcctcggcgtcgcctcgctctgttcc 779
||||| | |||||||||| |||||||||||||| ||| ||||| ||||| |||||| |||
Sbjct: 78 acggtagtcatttcccttggccggagatgaggtcgccgcggcgccgccttgctctgctcc 19
Query: 780 gg 781
||
Sbjct: 18 gg 17
>gb|BQ760071.1|BQ760071 EBpi07_SQ003_J01_R pistil, 12 DPA, no treatment, cv Optic, EBpi07
Hordeum vulgare subsp. vulgare cDNA clone
EBpi07_SQ003_J01 5', mRNA sequence
Length = 676
Score = 377 bits (190), Expect = e-103
Identities = 410/482 (85%), Gaps = 1/482 (0%)
Strand = Plus / Minus
Query: 301 ggctgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtacacagag 360
||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| | |
Sbjct: 495 ggctgcctgttcttcttcttgaccccagacttggaaacctggaggctgcggtacactgcg 436
Query: 361 ctcagcctaccaagggccgacttggtcagatcaggcctgtaatagttgtcgccaacctgg 420
|||||||| ||||||||| ||||||||| ||||||||||| |||||||||| ||||||
Sbjct: 435 ctcagccttgcaagggccggcttggtcaggtcaggcctgtagtagttgtcgcatacctgg 376
Query: 421 tttttcacagccttggccatcttgcggaactccttgcgcattacagacttgtggctgagc 480
|| || |||| |||||||||||||||||||||||||||||| | || |||||| ||||
Sbjct: 375 ttcttgacagacttggccatcttgcggaactccttgcgcatcagagtcttgtgctggagc 316
Query: 481 ttcgcgggtgtgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt 540
|| || || ||||||||||||||||||||||| || || ||||| |||||| ||||| |
Sbjct: 315 ttggcaggggtgttctgcttcttggtcttggtcgtggacaggacgacagccttgtcctct 256
Query: 541 ccagcagctggctggatcgttacagttttcttgtttgctaagccagagtacttgtaggag 600
|| || | |||||||| | || || || |||| || ||||| ||| |||||||||||
Sbjct: 255 cccgctgatggctggacagccacggtcttgctgttcgccaagcccgagaacttgtaggag 196
Query: 601 tgtacattgtagaggttgttgggctccttggtgaactgcaccttggcattgccgttgcca 660
|| ||||||||||||||||||||||||||| ||||||| |||||||| |||| ||||||
Sbjct: 195 tggacattgtagaggttgttgggctccttgctgaactgtaccttggcgttgctgttgccg 136
Query: 661 aactgcttcaccaggaaggagttgttcttcctcacaatctgccagatcagatcccctgga 720
|||||||| | || |||| ||||||||||| |||| | || ||||| |||| || |||
Sbjct: 135 aactgcttgatcaagaagcagttgttcttcttcacgagctcccagaccagagatcccgga 76
Query: 721 acggtcgccatttcccttcgccggagatgaggt-gcctcggcgtcgcctcgctctgttcc 779
||||| | |||||||||| |||||||||||||| ||| ||||| ||||| |||||| |||
Sbjct: 75 acggtagtcatttcccttggccggagatgaggtcgccgcggcgccgccttgctctgctcc 16
Query: 780 gg 781
||
Sbjct: 15 gg 14
>gb|BQ764827.1|BQ764827 EBca01_SQ005_C05_R carpel, pre-anthesis, no treatment, cv Optic,
EBca01 Hordeum vulgare subsp. vulgare cDNA clone
EBca01_SQ005_C05 5', mRNA sequence
Length = 687
Score = 377 bits (190), Expect = e-103
Identities = 410/482 (85%), Gaps = 1/482 (0%)
Strand = Plus / Minus
Query: 301 ggctgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtacacagag 360
||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| | |
Sbjct: 490 ggctgcctgttcttcttcttgaccccagacttggaaacctggaggctgcggtacactgcg 431
Query: 361 ctcagcctaccaagggccgacttggtcagatcaggcctgtaatagttgtcgccaacctgg 420
|||||||| ||||||||| ||||||||| ||||||||||| |||||||||| ||||||
Sbjct: 430 ctcagccttgcaagggccggcttggtcaggtcaggcctgtagtagttgtcgcatacctgg 371
Query: 421 tttttcacagccttggccatcttgcggaactccttgcgcattacagacttgtggctgagc 480
|| || |||| |||||||||||||||||||||||||||||| | || |||||| ||||
Sbjct: 370 ttcttgacagacttggccatcttgcggaactccttgcgcatcagagtcttgtgctggagc 311
Query: 481 ttcgcgggtgtgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt 540
|| || || ||||||||||||||||||||||| || || ||||| |||||| ||||| |
Sbjct: 310 ttggcaggggtgttctgcttcttggtcttggtcgtggacaggacgacagccttgtcctct 251
Query: 541 ccagcagctggctggatcgttacagttttcttgtttgctaagccagagtacttgtaggag 600
|| || | |||||||| | || || || |||| || ||||| ||| |||||||||||
Sbjct: 250 cccgctgatggctggacagccacggtcttgctgttcgccaagcccgagaacttgtaggag 191
Query: 601 tgtacattgtagaggttgttgggctccttggtgaactgcaccttggcattgccgttgcca 660
|| ||||||||||||||||||||||||||| ||||||| |||||||| |||| ||||||
Sbjct: 190 tggacattgtagaggttgttgggctccttgctgaactgtaccttggcgttgctgttgccg 131
Query: 661 aactgcttcaccaggaaggagttgttcttcctcacaatctgccagatcagatcccctgga 720
|||||||| | || |||| ||||||||||| |||| | || ||||| |||| || |||
Sbjct: 130 aactgcttgatcaagaagcagttgttcttcttcacgagctcccagaccagagatcccgga 71
Query: 721 acggtcgccatttcccttcgccggagatgaggt-gcctcggcgtcgcctcgctctgttcc 779
||||| | |||||||||| |||||||||||||| ||| ||||| ||||| |||||| |||
Sbjct: 70 acggtagtcatttcccttggccggagatgaggtcgccgcggcgccgccttgctctgctcc 11
Query: 780 gg 781
||
Sbjct: 10 gg 9
>gb|BQ768464.1|BQ768464 EBro08_SQ011_E19_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ011_E19 5', mRNA sequence
Length = 663
Score = 377 bits (190), Expect = e-103
Identities = 410/482 (85%), Gaps = 1/482 (0%)
Strand = Plus / Minus
Query: 301 ggctgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtacacagag 360
||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| | |
Sbjct: 482 ggctgcctgttcttcttcttgaccccagacttggaaacctggaggctgcggtacactgcg 423
Query: 361 ctcagcctaccaagggccgacttggtcagatcaggcctgtaatagttgtcgccaacctgg 420
|||||||| ||||||||| ||||||||| ||||||||||| |||||||||| ||||||
Sbjct: 422 ctcagccttgcaagggccggcttggtcaggtcaggcctgtagtagttgtcgcatacctgg 363
Query: 421 tttttcacagccttggccatcttgcggaactccttgcgcattacagacttgtggctgagc 480
|| || |||| |||||||||||||||||||||||||||||| | || |||||| ||||
Sbjct: 362 ttcttgacagacttggccatcttgcggaactccttgcgcatcagagtcttgtgctggagc 303
Query: 481 ttcgcgggtgtgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt 540
|| || || ||||||||||||||||||||||| || || ||||| |||||| ||||| |
Sbjct: 302 ttggcaggggtgttctgcttcttggtcttggtcgtggacaggacgacagccttgtcctct 243
Query: 541 ccagcagctggctggatcgttacagttttcttgtttgctaagccagagtacttgtaggag 600
|| || | |||||||| | || || || |||| || ||||| ||| |||||||||||
Sbjct: 242 cccgctgatggctggacagccacggtcttgctgttcgccaagcccgagaacttgtaggag 183
Query: 601 tgtacattgtagaggttgttgggctccttggtgaactgcaccttggcattgccgttgcca 660
|| ||||||||||||||||||||||||||| ||||||| |||||||| |||| ||||||
Sbjct: 182 tggacattgtagaggttgttgggctccttgctgaactgtaccttggcgttgctgttgccg 123
Query: 661 aactgcttcaccaggaaggagttgttcttcctcacaatctgccagatcagatcccctgga 720
|||||||| | || |||| ||||||||||| |||| | || ||||| |||| || |||
Sbjct: 122 aactgcttgatcaagaagcagttgttcttcttcacgagctcccagaccagagatcccgga 63
Query: 721 acggtcgccatttcccttcgccggagatgaggt-gcctcggcgtcgcctcgctctgttcc 779
||||| | |||||||||| |||||||||||||| ||| ||||| ||||| |||||| |||
Sbjct: 62 acggtagtcatttcccttggccggagatgaggtcgccgcggcgccgccttgctctgctcc 3
Query: 780 gg 781
||
Sbjct: 2 gg 1
>gb|BU968883.1|BU968883 HB08O03r BC Hordeum vulgare subsp. vulgare cDNA clone HB08O03
5-PRIME, mRNA sequence
Length = 612
Score = 377 bits (190), Expect = e-103
Identities = 410/482 (85%), Gaps = 1/482 (0%)
Strand = Plus / Minus
Query: 301 ggctgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtacacagag 360
||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| | |
Sbjct: 508 ggctgcctgttcttcttcttgaccccagacttggaaacctggaggctgcggtacactgcg 449
Query: 361 ctcagcctaccaagggccgacttggtcagatcaggcctgtaatagttgtcgccaacctgg 420
|||||||| ||||||||| ||||||||| ||||||||||| |||||||||| ||||||
Sbjct: 448 ctcagccttgcaagggccggcttggtcaggtcaggcctgtagtagttgtcgcatacctgg 389
Query: 421 tttttcacagccttggccatcttgcggaactccttgcgcattacagacttgtggctgagc 480
|| || |||| |||||||||||||||||||||||||||||| | || |||||| ||||
Sbjct: 388 ttcttgacagacttggccatcttgcggaactccttgcgcatcagagtcttgtgctggagc 329
Query: 481 ttcgcgggtgtgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt 540
|| || || ||||||||||||||||||||||| || || ||||| |||||| ||||| |
Sbjct: 328 ttggcaggggtgttctgcttcttggtcttggtcgtggacaggacgacagccttgtcctct 269
Query: 541 ccagcagctggctggatcgttacagttttcttgtttgctaagccagagtacttgtaggag 600
|| || | |||||||| | || || || |||| || ||||| ||| |||||||||||
Sbjct: 268 cccgctgatggctggacagccacggtcttgctgttcgccaagcccgagaacttgtaggag 209
Query: 601 tgtacattgtagaggttgttgggctccttggtgaactgcaccttggcattgccgttgcca 660
|| ||||||||||||||||||||||||||| ||||||| |||||||| |||| ||||||
Sbjct: 208 tggacattgtagaggttgttgggctccttgctgaactgtaccttggcgttgctgttgccg 149
Query: 661 aactgcttcaccaggaaggagttgttcttcctcacaatctgccagatcagatcccctgga 720
|||||||| | || |||| ||||||||||| |||| | || ||||| |||| || |||
Sbjct: 148 aactgcttgatcaagaagcagttgttcttcttcacgagctcccagaccagagatcccgga 89
Query: 721 acggtcgccatttcccttcgccggagatgaggt-gcctcggcgtcgcctcgctctgttcc 779
||||| | |||||||||| |||||||||||||| ||| ||||| ||||| |||||| |||
Sbjct: 88 acggtagtcatttcccttggccggagatgaggtcgccgcggcgccgccttgctctgctcc 29
Query: 780 gg 781
||
Sbjct: 28 gg 27
>gb|BU981711.1|BU981711 HA24G15r HA Hordeum vulgare subsp. vulgare cDNA clone HA24G15
5-PRIME, mRNA sequence
Length = 580
Score = 377 bits (190), Expect = e-103
Identities = 410/482 (85%), Gaps = 1/482 (0%)
Strand = Plus / Minus
Query: 301 ggctgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtacacagag 360
||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| | |
Sbjct: 501 ggctgcctgttcttcttcttgaccccagacttggaaacctggaggctgcggtacactgcg 442
Query: 361 ctcagcctaccaagggccgacttggtcagatcaggcctgtaatagttgtcgccaacctgg 420
|||||||| ||||||||| ||||||||| ||||||||||| |||||||||| ||||||
Sbjct: 441 ctcagccttgcaagggccggcttggtcaggtcaggcctgtagtagttgtcgcatacctgg 382
Query: 421 tttttcacagccttggccatcttgcggaactccttgcgcattacagacttgtggctgagc 480
|| || |||| |||||||||||||||||||||||||||||| | || |||||| ||||
Sbjct: 381 ttcttgacagacttggccatcttgcggaactccttgcgcatcagagtcttgtgctggagc 322
Query: 481 ttcgcgggtgtgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt 540
|| || || ||||||||||||||||||||||| || || ||||| |||||| ||||| |
Sbjct: 321 ttggcaggggtgttctgcttcttggtcttggtcgtggacaggacgacagccttgtcctct 262
Query: 541 ccagcagctggctggatcgttacagttttcttgtttgctaagccagagtacttgtaggag 600
|| || | |||||||| | || || || |||| || ||||| ||| |||||||||||
Sbjct: 261 cccgctgatggctggacagccacggtcttgctgttcgccaagcccgagaacttgtaggag 202
Query: 601 tgtacattgtagaggttgttgggctccttggtgaactgcaccttggcattgccgttgcca 660
|| ||||||||||||||||||||||||||| ||||||| |||||||| |||| ||||||
Sbjct: 201 tggacattgtagaggttgttgggctccttgctgaactgtaccttggcgttgctgttgccg 142
Query: 661 aactgcttcaccaggaaggagttgttcttcctcacaatctgccagatcagatcccctgga 720
|||||||| | || |||| ||||||||||| |||| | || ||||| |||| || |||
Sbjct: 141 aactgcttgatcaagaagcagttgttcttcttcacgagctcccagaccagagatcccgga 82
Query: 721 acggtcgccatttcccttcgccggagatgaggt-gcctcggcgtcgcctcgctctgttcc 779
||||| | |||||||||| |||||||||||||| ||| ||||| ||||| |||||| |||
Sbjct: 81 acggtagtcatttcccttggccggagatgaggtcgccgcggcgccgccttgctctgctcc 22
Query: 780 gg 781
||
Sbjct: 21 gg 20
>gb|BU983978.1|BU983978 HA31J22r HA Hordeum vulgare subsp. vulgare cDNA clone HA31J22
5-PRIME, mRNA sequence
Length = 522
Score = 377 bits (190), Expect = e-103
Identities = 410/482 (85%), Gaps = 1/482 (0%)
Strand = Plus / Minus
Query: 301 ggctgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtacacagag 360
||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| | |
Sbjct: 502 ggctgcctgttcttcttcttgaccccagacttggaaacctggaggctgcggtacactgcg 443
Query: 361 ctcagcctaccaagggccgacttggtcagatcaggcctgtaatagttgtcgccaacctgg 420
|||||||| ||||||||| ||||||||| ||||||||||| |||||||||| ||||||
Sbjct: 442 ctcagccttgcaagggccggcttggtcaggtcaggcctgtagtagttgtcgcatacctgg 383
Query: 421 tttttcacagccttggccatcttgcggaactccttgcgcattacagacttgtggctgagc 480
|| || |||| |||||||||||||||||||||||||||||| | || |||||| ||||
Sbjct: 382 ttcttgacagacttggccatcttgcggaactccttgcgcatcagagtcttgtgctggagc 323
Query: 481 ttcgcgggtgtgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt 540
|| || || ||||||||||||||||||||||| || || ||||| |||||| ||||| |
Sbjct: 322 ttggcaggggtgttctgcttcttggtcttggtcgtggacaggacgacagccttgtcctct 263
Query: 541 ccagcagctggctggatcgttacagttttcttgtttgctaagccagagtacttgtaggag 600
|| || | |||||||| | || || || |||| || ||||| ||| |||||||||||
Sbjct: 262 cccgctgatggctggacagccacggtcttgctgttcgccaagcccgagaacttgtaggag 203
Query: 601 tgtacattgtagaggttgttgggctccttggtgaactgcaccttggcattgccgttgcca 660
|| ||||||||||||||||||||||||||| ||||||| |||||||| |||| ||||||
Sbjct: 202 tggacattgtagaggttgttgggctccttgctgaactgtaccttggcgttgctgttgccg 143
Query: 661 aactgcttcaccaggaaggagttgttcttcctcacaatctgccagatcagatcccctgga 720
|||||||| | || |||| ||||||||||| |||| | || ||||| |||| || |||
Sbjct: 142 aactgcttgatcaagaagcagttgttcttcttcacgagctcccagaccagagatcccgga 83
Query: 721 acggtcgccatttcccttcgccggagatgaggt-gcctcggcgtcgcctcgctctgttcc 779
||||| | |||||||||| |||||||||||||| ||| ||||| ||||| |||||| |||
Sbjct: 82 acggtagtcatttcccttggccggagatgaggtcgccgcggcgccgccttgctctgctcc 23
Query: 780 gg 781
||
Sbjct: 22 gg 21
>gb|BU988657.1|BU988657 HF18F03r HF Hordeum vulgare subsp. vulgare cDNA clone HF18F03
5-PRIME, mRNA sequence
Length = 573
Score = 377 bits (190), Expect = e-103
Identities = 410/482 (85%), Gaps = 1/482 (0%)
Strand = Plus / Minus
Query: 301 ggctgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtacacagag 360
||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| | |
Sbjct: 485 ggctgcctgttcttcttcttgaccccagacttggaaacctggaggctgcggtacactgcg 426
Query: 361 ctcagcctaccaagggccgacttggtcagatcaggcctgtaatagttgtcgccaacctgg 420
|||||||| ||||||||| ||||||||| ||||||||||| |||||||||| ||||||
Sbjct: 425 ctcagccttgcaagggccggcttggtcaggtcaggcctgtagtagttgtcgcatacctgg 366
Query: 421 tttttcacagccttggccatcttgcggaactccttgcgcattacagacttgtggctgagc 480
|| || |||| |||||||||||||||||||||||||||||| | || |||||| ||||
Sbjct: 365 ttcttgacagacttggccatcttgcggaactccttgcgcatcagagtcttgtgctggagc 306
Query: 481 ttcgcgggtgtgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt 540
|| || || ||||||||||||||||||||||| || || ||||| |||||| ||||| |
Sbjct: 305 ttggcaggggtgttctgcttcttggtcttggtcgtggacaggacgacagccttgtcctct 246
Query: 541 ccagcagctggctggatcgttacagttttcttgtttgctaagccagagtacttgtaggag 600
|| || | |||||||| | || || || |||| || ||||| ||| |||||||||||
Sbjct: 245 cccgctgatggctggacagccacggtcttgctgttcgccaagcccgagaacttgtaggag 186
Query: 601 tgtacattgtagaggttgttgggctccttggtgaactgcaccttggcattgccgttgcca 660
|| ||||||||||||||||||||||||||| ||||||| |||||||| |||| ||||||
Sbjct: 185 tggacattgtagaggttgttgggctccttgctgaactgtaccttggcgttgctgttgccg 126
Query: 661 aactgcttcaccaggaaggagttgttcttcctcacaatctgccagatcagatcccctgga 720
|||||||| | || |||| ||||||||||| |||| | || ||||| |||| || |||
Sbjct: 125 aactgcttgatcaagaagcagttgttcttcttcacgagctcccagaccagagatcccgga 66
Query: 721 acggtcgccatttcccttcgccggagatgaggt-gcctcggcgtcgcctcgctctgttcc 779
||||| | |||||||||| |||||||||||||| ||| ||||| ||||| |||||| |||
Sbjct: 65 acggtagtcatttcccttggccggagatgaggtcgccgcggcgccgccttgctctgctcc 6
Query: 780 gg 781
||
Sbjct: 5 gg 4
>gb|BU988764.1|BU988764 HF18K08r HF Hordeum vulgare subsp. vulgare cDNA clone HF18K08
5-PRIME, mRNA sequence
Length = 547
Score = 377 bits (190), Expect = e-103
Identities = 410/482 (85%), Gaps = 1/482 (0%)
Strand = Plus / Minus
Query: 301 ggctgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtacacagag 360
||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| | |
Sbjct: 493 ggctgcctgttcttcttcttgaccccagacttggaaacctggaggctgcggtacactgcg 434
Query: 361 ctcagcctaccaagggccgacttggtcagatcaggcctgtaatagttgtcgccaacctgg 420
|||||||| ||||||||| ||||||||| ||||||||||| |||||||||| ||||||
Sbjct: 433 ctcagccttgcaagggccggcttggtcaggtcaggcctgtagtagttgtcgcatacctgg 374
Query: 421 tttttcacagccttggccatcttgcggaactccttgcgcattacagacttgtggctgagc 480
|| || |||| |||||||||||||||||||||||||||||| | || |||||| ||||
Sbjct: 373 ttcttgacagacttggccatcttgcggaactccttgcgcatcagagtcttgtgctggagc 314
Query: 481 ttcgcgggtgtgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt 540
|| || || ||||||||||||||||||||||| || || ||||| |||||| ||||| |
Sbjct: 313 ttggcaggggtgttctgcttcttggtcttggtcgtggacaggacgacagccttgtcctct 254
Query: 541 ccagcagctggctggatcgttacagttttcttgtttgctaagccagagtacttgtaggag 600
|| || | |||||||| | || || || |||| || ||||| ||| |||||||||||
Sbjct: 253 cccgctgatggctggacagccacggtcttgctgttcgccaagcccgagaacttgtaggag 194
Query: 601 tgtacattgtagaggttgttgggctccttggtgaactgcaccttggcattgccgttgcca 660
|| ||||||||||||||||||||||||||| ||||||| |||||||| |||| ||||||
Sbjct: 193 tggacattgtagaggttgttgggctccttgctgaactgtaccttggcgttgctgttgccg 134
Query: 661 aactgcttcaccaggaaggagttgttcttcctcacaatctgccagatcagatcccctgga 720
|||||||| | || |||| ||||||||||| |||| | || ||||| |||| || |||
Sbjct: 133 aactgcttgatcaagaagcagttgttcttcttcacgagctcccagaccagagatcccgga 74
Query: 721 acggtcgccatttcccttcgccggagatgaggt-gcctcggcgtcgcctcgctctgttcc 779
||||| | |||||||||| |||||||||||||| ||| ||||| ||||| |||||| |||
Sbjct: 73 acggtagtcatttcccttggccggagatgaggtcgccgcggcgccgccttgctctgctcc 14
Query: 780 gg 781
||
Sbjct: 13 gg 12
>gb|BU990202.1|BU990202 HF24G03r HF Hordeum vulgare subsp. vulgare cDNA clone HF24G03
5-PRIME, mRNA sequence
Length = 620
Score = 377 bits (190), Expect = e-103
Identities = 410/482 (85%), Gaps = 1/482 (0%)
Strand = Plus / Minus
Query: 301 ggctgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtacacagag 360
||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| | |
Sbjct: 492 ggctgcctgttcttcttcttgaccccagacttggaaacctggaggctgcggtacactgcg 433
Query: 361 ctcagcctaccaagggccgacttggtcagatcaggcctgtaatagttgtcgccaacctgg 420
|||||||| ||||||||| ||||||||| ||||||||||| |||||||||| ||||||
Sbjct: 432 ctcagccttgcaagggccggcttggtcaggtcaggcctgtagtagttgtcgcatacctgg 373
Query: 421 tttttcacagccttggccatcttgcggaactccttgcgcattacagacttgtggctgagc 480
|| || |||| |||||||||||||||||||||||||||||| | || |||||| ||||
Sbjct: 372 ttcttgacagacttggccatcttgcggaactccttgcgcatcagagtcttgtgctggagc 313
Query: 481 ttcgcgggtgtgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt 540
|| || || ||||||||||||||||||||||| || || ||||| |||||| ||||| |
Sbjct: 312 ttggcaggggtgttctgcttcttggtcttggtcgtggacaggacgacagccttgtcctct 253
Query: 541 ccagcagctggctggatcgttacagttttcttgtttgctaagccagagtacttgtaggag 600
|| || | |||||||| | || || || |||| || ||||| ||| |||||||||||
Sbjct: 252 cccgctgatggctggacagccacggtcttgctgttcgccaagcccgagaacttgtaggag 193
Query: 601 tgtacattgtagaggttgttgggctccttggtgaactgcaccttggcattgccgttgcca 660
|| ||||||||||||||||||||||||||| ||||||| |||||||| |||| ||||||
Sbjct: 192 tggacattgtagaggttgttgggctccttgctgaactgtaccttggcgttgctgttgccg 133
Query: 661 aactgcttcaccaggaaggagttgttcttcctcacaatctgccagatcagatcccctgga 720
|||||||| | || |||| ||||||||||| |||| | || ||||| |||| || |||
Sbjct: 132 aactgcttgatcaagaagcagttgttcttcttcacgagctcccagaccagagatcccgga 73
Query: 721 acggtcgccatttcccttcgccggagatgaggt-gcctcggcgtcgcctcgctctgttcc 779
||||| | |||||||||| |||||||||||||| ||| ||||| ||||| |||||| |||
Sbjct: 72 acggtagtcatttcccttggccggagatgaggtcgccgcggcgccgccttgctctgctcc 13
Query: 780 gg 781
||
Sbjct: 12 gg 11
>gb|CA024600.1|CA024600 HZ49M08r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ49M08
5-PRIME, mRNA sequence
Length = 602
Score = 377 bits (190), Expect = e-103
Identities = 410/482 (85%), Gaps = 1/482 (0%)
Strand = Plus / Minus
Query: 301 ggctgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtacacagag 360
||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| | |
Sbjct: 498 ggctgcctgttcttcttcttgaccccagacttggaaacctggaggctgcggtacactgcg 439
Query: 361 ctcagcctaccaagggccgacttggtcagatcaggcctgtaatagttgtcgccaacctgg 420
|||||||| ||||||||| ||||||||| ||||||||||| |||||||||| ||||||
Sbjct: 438 ctcagccttgcaagggccggcttggtcaggtcaggcctgtagtagttgtcgcatacctgg 379
Query: 421 tttttcacagccttggccatcttgcggaactccttgcgcattacagacttgtggctgagc 480
|| || |||| |||||||||||||||||||||||||||||| | || |||||| ||||
Sbjct: 378 ttcttgacagacttggccatcttgcggaactccttgcgcatcagagtcttgtgctggagc 319
Query: 481 ttcgcgggtgtgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt 540
|| || || ||||||||||||||||||||||| || || ||||| |||||| ||||| |
Sbjct: 318 ttggcaggggtgttctgcttcttggtcttggtcgtggacaggacgacagccttgtcctct 259
Query: 541 ccagcagctggctggatcgttacagttttcttgtttgctaagccagagtacttgtaggag 600
|| || | |||||||| | || || || |||| || ||||| ||| |||||||||||
Sbjct: 258 cccgctgatggctggacagccacggtcttgctgttcgccaagcccgagaacttgtaggag 199
Query: 601 tgtacattgtagaggttgttgggctccttggtgaactgcaccttggcattgccgttgcca 660
|| ||||||||||||||||||||||||||| ||||||| |||||||| |||| ||||||
Sbjct: 198 tggacattgtagaggttgttgggctccttgctgaactgtaccttggcgttgctgttgccg 139
Query: 661 aactgcttcaccaggaaggagttgttcttcctcacaatctgccagatcagatcccctgga 720
|||||||| | || |||| ||||||||||| |||| | || ||||| |||| || |||
Sbjct: 138 aactgcttgatcaagaagcagttgttcttcttcacgagctcccagaccagagatcccgga 79
Query: 721 acggtcgccatttcccttcgccggagatgaggt-gcctcggcgtcgcctcgctctgttcc 779
||||| | |||||||||| |||||||||||||| ||| ||||| ||||| |||||| |||
Sbjct: 78 acggtagtcatttcccttggccggagatgaggtcgccgcggcgccgccttgctctgctcc 19
Query: 780 gg 781
||
Sbjct: 18 gg 17
>gb|CV057878.1|CV057878 BNEL31g9 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL31g9 5' similar to putative 60S
ribosomal L28 protein, mRNA sequence
Length = 595
Score = 377 bits (190), Expect = e-103
Identities = 410/482 (85%), Gaps = 1/482 (0%)
Strand = Plus / Minus
Query: 301 ggctgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtacacagag 360
||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| | |
Sbjct: 492 ggctgcctgttcttcttcttgaccccagacttggaaacctggaggctgcggtacactgcg 433
Query: 361 ctcagcctaccaagggccgacttggtcagatcaggcctgtaatagttgtcgccaacctgg 420
|||||||| ||||||||| ||||||||| ||||||||||| |||||||||| ||||||
Sbjct: 432 ctcagccttgcaagggccggcttggtcaggtcaggcctgtagtagttgtcgcatacctgg 373
Query: 421 tttttcacagccttggccatcttgcggaactccttgcgcattacagacttgtggctgagc 480
|| || |||| |||||||||||||||||||||||||||||| | || |||||| ||||
Sbjct: 372 ttcttgacagacttggccatcttgcggaactccttgcgcatcagagtcttgtgctggagc 313
Query: 481 ttcgcgggtgtgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt 540
|| || || ||||||||||||||||||||||| || || ||||| |||||| ||||| |
Sbjct: 312 ttggcaggggtgttctgcttcttggtcttggtcgtggacaggacgacagccttgtcctct 253
Query: 541 ccagcagctggctggatcgttacagttttcttgtttgctaagccagagtacttgtaggag 600
|| || | |||||||| | || || || |||| || ||||| ||| |||||||||||
Sbjct: 252 cccgctgatggctggacagccacggtcttgctgttcgccaagcccgagaacttgtaggag 193
Query: 601 tgtacattgtagaggttgttgggctccttggtgaactgcaccttggcattgccgttgcca 660
|| ||||||||||||||||||||||||||| ||||||| |||||||| |||| ||||||
Sbjct: 192 tggacattgtagaggttgttgggctccttgctgaactgtaccttggcgttgctgttgccg 133
Query: 661 aactgcttcaccaggaaggagttgttcttcctcacaatctgccagatcagatcccctgga 720
|||||||| | || |||| ||||||||||| |||| | || ||||| |||| || |||
Sbjct: 132 aactgcttgatcaagaagcagttgttcttcttcacgagctcccagaccagagatcccgga 73
Query: 721 acggtcgccatttcccttcgccggagatgaggt-gcctcggcgtcgcctcgctctgttcc 779
||||| | |||||||||| |||||||||||||| ||| ||||| ||||| |||||| |||
Sbjct: 72 acggtagtcatttcccttggccggagatgaggtcgccgcggcgccgccttgctctgctcc 13
Query: 780 gg 781
||
Sbjct: 12 gg 11
>gb|CK122869.1|CK122869 BES1824106g21 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010G216 5-PRIME, mRNA sequence
Length = 673
Score = 377 bits (190), Expect = e-103
Identities = 410/482 (85%), Gaps = 1/482 (0%)
Strand = Plus / Minus
Query: 301 ggctgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtacacagag 360
||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| | |
Sbjct: 497 ggctgcctgttcttcttcttgaccccagacttggaaacctggaggctgcggtacactgcg 438
Query: 361 ctcagcctaccaagggccgacttggtcagatcaggcctgtaatagttgtcgccaacctgg 420
|||||||| ||||||||| ||||||||| ||||||||||| |||||||||| ||||||
Sbjct: 437 ctcagccttgcaagggccggcttggtcaggtcaggcctgtagtagttgtcgcatacctgg 378
Query: 421 tttttcacagccttggccatcttgcggaactccttgcgcattacagacttgtggctgagc 480
|| || |||| |||||||||||||||||||||||||||||| | || |||||| ||||
Sbjct: 377 ttcttgacagacttggccatcttgcggaactccttgcgcatcagagtcttgtgctggagc 318
Query: 481 ttcgcgggtgtgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt 540
|| || || ||||||||||||||||||||||| || || ||||| |||||| ||||| |
Sbjct: 317 ttggcaggggtgttctgcttcttggtcttggtcgtggacaggacgacagccttgtcctct 258
Query: 541 ccagcagctggctggatcgttacagttttcttgtttgctaagccagagtacttgtaggag 600
|| || | |||||||| | || || || |||| || ||||| ||| |||||||||||
Sbjct: 257 cccgctgatggctggacagccacggtcttgctgttcgccaagcccgagaacttgtaggag 198
Query: 601 tgtacattgtagaggttgttgggctccttggtgaactgcaccttggcattgccgttgcca 660
|| ||||||||||||||||||||||||||| ||||||| |||||||| |||| ||||||
Sbjct: 197 tggacattgtagaggttgttgggctccttgctgaactgtaccttggcgttgctgttgccg 138
Query: 661 aactgcttcaccaggaaggagttgttcttcctcacaatctgccagatcagatcccctgga 720
|||||||| | || |||| ||||||||||| |||| | || ||||| |||| || |||
Sbjct: 137 aactgcttgatcaagaagcagttgttcttcttcacgagctcccagaccagagatcccgga 78
Query: 721 acggtcgccatttcccttcgccggagatgaggt-gcctcggcgtcgcctcgctctgttcc 779
||||| | |||||||||| |||||||||||||| ||| ||||| ||||| |||||| |||
Sbjct: 77 acggtagtcatttcccttggccggagatgaggtcgccgcggcgccgccttgctctgctcc 18
Query: 780 gg 781
||
Sbjct: 17 gg 16
>gb|CK124871.1|CK124871 BES1824110k21 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010K2110 5-PRIME, mRNA sequence
Length = 586
Score = 377 bits (190), Expect = e-103
Identities = 410/482 (85%), Gaps = 1/482 (0%)
Strand = Plus / Minus
Query: 301 ggctgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtacacagag 360
||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| | |
Sbjct: 498 ggctgcctgttcttcttcttgaccccagacttggaaacctggaggctgcggtacactgcg 439
Query: 361 ctcagcctaccaagggccgacttggtcagatcaggcctgtaatagttgtcgccaacctgg 420
|||||||| ||||||||| ||||||||| ||||||||||| |||||||||| ||||||
Sbjct: 438 ctcagccttgcaagggccggcttggtcaggtcaggcctgtagtagttgtcgcatacctgg 379
Query: 421 tttttcacagccttggccatcttgcggaactccttgcgcattacagacttgtggctgagc 480
|| || |||| |||||||||||||||||||||||||||||| | || |||||| ||||
Sbjct: 378 ttcttgacagacttggccatcttgcggaactccttgcgcatcagagtcttgtgctggagc 319
Query: 481 ttcgcgggtgtgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt 540
|| || || ||||||||||||||||||||||| || || ||||| |||||| ||||| |
Sbjct: 318 ttggcaggggtgttctgcttcttggtcttggtcgtggacaggacgacagccttgtcctct 259
Query: 541 ccagcagctggctggatcgttacagttttcttgtttgctaagccagagtacttgtaggag 600
|| || | |||||||| | || || || |||| || ||||| ||| |||||||||||
Sbjct: 258 cccgctgatggctggacagccacggtcttgctgttcgccaagcccgagaacttgtaggag 199
Query: 601 tgtacattgtagaggttgttgggctccttggtgaactgcaccttggcattgccgttgcca 660
|| ||||||||||||||||||||||||||| ||||||| |||||||| |||| ||||||
Sbjct: 198 tggacattgtagaggttgttgggctccttgctgaactgtaccttggcgttgctgttgccg 139
Query: 661 aactgcttcaccaggaaggagttgttcttcctcacaatctgccagatcagatcccctgga 720
|||||||| | || |||| ||||||||||| |||| | || ||||| |||| || |||
Sbjct: 138 aactgcttgatcaagaagcagttgttcttcttcacgagctcccagaccagagatcccgga 79
Query: 721 acggtcgccatttcccttcgccggagatgaggt-gcctcggcgtcgcctcgctctgttcc 779
||||| | |||||||||| |||||||||||||| ||| ||||| ||||| |||||| |||
Sbjct: 78 acggtagtcatttcccttggccggagatgaggtcgccgcggcgccgccttgctctgctcc 19
Query: 780 gg 781
||
Sbjct: 18 gg 17
>gb|CK125547.1|CK125547 BES1824109a09 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010A099 5-PRIME, mRNA sequence
Length = 695
Score = 377 bits (190), Expect = e-103
Identities = 410/482 (85%), Gaps = 1/482 (0%)
Strand = Plus / Minus
Query: 301 ggctgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtacacagag 360
||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| | |
Sbjct: 512 ggctgcctgttcttcttcttgaccccagacttggaaacctggaggctgcggtacactgcg 453
Query: 361 ctcagcctaccaagggccgacttggtcagatcaggcctgtaatagttgtcgccaacctgg 420
|||||||| ||||||||| ||||||||| ||||||||||| |||||||||| ||||||
Sbjct: 452 ctcagccttgcaagggccggcttggtcaggtcaggcctgtagtagttgtcgcatacctgg 393
Query: 421 tttttcacagccttggccatcttgcggaactccttgcgcattacagacttgtggctgagc 480
|| || |||| |||||||||||||||||||||||||||||| | || |||||| ||||
Sbjct: 392 ttcttgacagacttggccatcttgcggaactccttgcgcatcagagtcttgtgctggagc 333
Query: 481 ttcgcgggtgtgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt 540
|| || || ||||||||||||||||||||||| || || ||||| |||||| ||||| |
Sbjct: 332 ttggcaggggtgttctgcttcttggtcttggtcgtggacaggacgacagccttgtcctct 273
Query: 541 ccagcagctggctggatcgttacagttttcttgtttgctaagccagagtacttgtaggag 600
|| || | |||||||| | || || || |||| || ||||| ||| |||||||||||
Sbjct: 272 cccgctgatggctggacagccacggtcttgctgttcgccaagcccgagaacttgtaggag 213
Query: 601 tgtacattgtagaggttgttgggctccttggtgaactgcaccttggcattgccgttgcca 660
|| ||||||||||||||||||||||||||| ||||||| |||||||| |||| ||||||
Sbjct: 212 tggacattgtagaggttgttgggctccttgctgaactgtaccttggcgttgctgttgccg 153
Query: 661 aactgcttcaccaggaaggagttgttcttcctcacaatctgccagatcagatcccctgga 720
|||||||| | || |||| ||||||||||| |||| | || ||||| |||| || |||
Sbjct: 152 aactgcttgatcaagaagcagttgttcttcttcacgagctcccagaccagagatcccgga 93
Query: 721 acggtcgccatttcccttcgccggagatgaggt-gcctcggcgtcgcctcgctctgttcc 779
||||| | |||||||||| |||||||||||||| ||| ||||| ||||| |||||| |||
Sbjct: 92 acggtagtcatttcccttggccggagatgaggtcgccgcggcgccgccttgctctgctcc 33
Query: 780 gg 781
||
Sbjct: 32 gg 31
>gb|CK125663.1|CK125663 BES1824109k10 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010K109 5-PRIME, mRNA sequence
Length = 672
Score = 377 bits (190), Expect = e-103
Identities = 410/482 (85%), Gaps = 1/482 (0%)
Strand = Plus / Minus
Query: 301 ggctgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtacacagag 360
||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| | |
Sbjct: 492 ggctgcctgttcttcttcttgaccccagacttggaaacctggaggctgcggtacactgcg 433
Query: 361 ctcagcctaccaagggccgacttggtcagatcaggcctgtaatagttgtcgccaacctgg 420
|||||||| ||||||||| ||||||||| ||||||||||| |||||||||| ||||||
Sbjct: 432 ctcagccttgcaagggccggcttggtcaggtcaggcctgtagtagttgtcgcatacctgg 373
Query: 421 tttttcacagccttggccatcttgcggaactccttgcgcattacagacttgtggctgagc 480
|| || |||| |||||||||||||||||||||||||||||| | || |||||| ||||
Sbjct: 372 ttcttgacagacttggccatcttgcggaactccttgcgcatcagagtcttgtgctggagc 313
Query: 481 ttcgcgggtgtgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt 540
|| || || ||||||||||||||||||||||| || || ||||| |||||| ||||| |
Sbjct: 312 ttggcaggggtgttctgcttcttggtcttggtcgtggacaggacgacagccttgtcctct 253
Query: 541 ccagcagctggctggatcgttacagttttcttgtttgctaagccagagtacttgtaggag 600
|| || | |||||||| | || || || |||| || ||||| ||| |||||||||||
Sbjct: 252 cccgctgatggctggacagccacggtcttgctgttcgccaagcccgagaacttgtaggag 193
Query: 601 tgtacattgtagaggttgttgggctccttggtgaactgcaccttggcattgccgttgcca 660
|| ||||||||||||||||||||||||||| ||||||| |||||||| |||| ||||||
Sbjct: 192 tggacattgtagaggttgttgggctccttgctgaactgtaccttggcgttgctgttgccg 133
Query: 661 aactgcttcaccaggaaggagttgttcttcctcacaatctgccagatcagatcccctgga 720
|||||||| | || |||| ||||||||||| |||| | || ||||| |||| || |||
Sbjct: 132 aactgcttgatcaagaagcagttgttcttcttcacgagctcccagaccagagatcccgga 73
Query: 721 acggtcgccatttcccttcgccggagatgaggt-gcctcggcgtcgcctcgctctgttcc 779
||||| | |||||||||| |||||||||||||| ||| ||||| ||||| |||||| |||
Sbjct: 72 acggtagtcatttcccttggccggagatgaggtcgccgcggcgccgccttgctctgctcc 13
Query: 780 gg 781
||
Sbjct: 12 gg 11
>gb|CV056251.1|CV056251 BNEL15F3 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL15F3 5' similar to putative 60S
ribosomal L28 protein, mRNA sequence
Length = 583
Score = 375 bits (189), Expect = e-102
Identities = 409/481 (85%), Gaps = 1/481 (0%)
Strand = Plus / Minus
Query: 301 ggctgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtacacagag 360
||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| | |
Sbjct: 488 ggctgcctgttcttcttcttgaccccagacttggaaacctggaggctgcggtacactgcg 429
Query: 361 ctcagcctaccaagggccgacttggtcagatcaggcctgtaatagttgtcgccaacctgg 420
|||||||| ||||||||| ||||||||| ||||||||||| |||||||||| ||||||
Sbjct: 428 ctcagccttgcaagggccggcttggtcaggtcaggcctgtagtagttgtcgcatacctgg 369
Query: 421 tttttcacagccttggccatcttgcggaactccttgcgcattacagacttgtggctgagc 480
|| || |||| |||||||||||||||||||||||||||||| | || |||||| ||||
Sbjct: 368 ttcttgacagacttggccatcttgcggaactccttgcgcatcagagtcttgtgctggagc 309
Query: 481 ttcgcgggtgtgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt 540
|| || || ||||||||||||||||||||||| || || ||||| |||||| ||||| |
Sbjct: 308 ttggcaggggtgttctgcttcttggtcttggtcgtggacaggacgacagccttgtcctct 249
Query: 541 ccagcagctggctggatcgttacagttttcttgtttgctaagccagagtacttgtaggag 600
|| || | |||||||| | || || || |||| || ||||| ||| |||||||||||
Sbjct: 248 cccgctgatggctggacagccacggtcttgctgttcgccaagcccgagaacttgtaggag 189
Query: 601 tgtacattgtagaggttgttgggctccttggtgaactgcaccttggcattgccgttgcca 660
|| ||||||||||||||||||||||||||| ||||||| |||||||| |||| ||||||
Sbjct: 188 tggacattgtagaggttgttgggctccttgctgaactgtaccttggcgttgctgttgccg 129
Query: 661 aactgcttcaccaggaaggagttgttcttcctcacaatctgccagatcagatcccctgga 720
|||||||| | || |||| ||||||||||| |||| | || ||||| |||| || |||
Sbjct: 128 aactgcttgatcaagaagcagttgttcttcttcacgagctcccagaccagagatcccgga 69
Query: 721 acggtcgccatttcccttcgccggagatgaggt-gcctcggcgtcgcctcgctctgttcc 779
||||| | |||||||||| |||||||||||||| ||| ||||| ||||| |||||| |||
Sbjct: 68 acggtagtcatttcccttggccggagatgaggtcgccgcggcgccgccttgctctgctcc 9
Query: 780 g 780
|
Sbjct: 8 g 8
>gb|CV061292.1|CV061292 BNEL67b3 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL67b3 5' similar to putative 60S
ribosomal L28 protein, mRNA sequence
Length = 627
Score = 375 bits (189), Expect = e-102
Identities = 409/481 (85%), Gaps = 1/481 (0%)
Strand = Plus / Minus
Query: 301 ggctgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtacacagag 360
||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| | |
Sbjct: 481 ggctgcctgttcttcttcttgaccccagacttggaaacctggaggctgcggtacactgcg 422
Query: 361 ctcagcctaccaagggccgacttggtcagatcaggcctgtaatagttgtcgccaacctgg 420
|||||||| ||||||||| ||||||||| ||||||||||| |||||||||| ||||||
Sbjct: 421 ctcagccttgcaagggccggcttggtcaggtcaggcctgtagtagttgtcgcatacctgg 362
Query: 421 tttttcacagccttggccatcttgcggaactccttgcgcattacagacttgtggctgagc 480
|| || |||| |||||||||||||||||||||||||||||| | || |||||| ||||
Sbjct: 361 ttcttgacagacttggccatcttgcggaactccttgcgcatcagagtcttgtgctggagc 302
Query: 481 ttcgcgggtgtgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt 540
|| || || ||||||||||||||||||||||| || || ||||| |||||| ||||| |
Sbjct: 301 ttggcaggggtgttctgcttcttggtcttggtcgtggacaggacgacagccttgtcctct 242
Query: 541 ccagcagctggctggatcgttacagttttcttgtttgctaagccagagtacttgtaggag 600
|| || | |||||||| | || || || |||| || ||||| ||| |||||||||||
Sbjct: 241 cccgctgatggctggacagccacggtcttgctgttcgccaagcccgagaacttgtaggag 182
Query: 601 tgtacattgtagaggttgttgggctccttggtgaactgcaccttggcattgccgttgcca 660
|| ||||||||||||||||||||||||||| ||||||| |||||||| |||| ||||||
Sbjct: 181 tggacattgtagaggttgttgggctccttgctgaactgtaccttggcgttgctgttgccg 122
Query: 661 aactgcttcaccaggaaggagttgttcttcctcacaatctgccagatcagatcccctgga 720
|||||||| | || |||| ||||||||||| |||| | || ||||| |||| || |||
Sbjct: 121 aactgcttgatcaagaagcagttgttcttcttcacgagctcccagaccagagatcccgga 62
Query: 721 acggtcgccatttcccttcgccggagatgaggt-gcctcggcgtcgcctcgctctgttcc 779
||||| | |||||||||| |||||||||||||| ||| ||||| ||||| |||||| |||
Sbjct: 61 acggtagtcatttcccttggccggagatgaggtcgccgcggcgccgccttgctctgctcc 2
Query: 780 g 780
|
Sbjct: 1 g 1
>gb|CV064057.1|CV064057 BNEL96h4 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL96h4 5' similar to putative 60S
ribosomal L28 protein, mRNA sequence
Length = 623
Score = 375 bits (189), Expect = e-102
Identities = 409/481 (85%), Gaps = 1/481 (0%)
Strand = Plus / Minus
Query: 301 ggctgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtacacagag 360
||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| | |
Sbjct: 488 ggctgcctgttcttcttcttgaccccagacttggaaacctggaggctgcggtacactgcg 429
Query: 361 ctcagcctaccaagggccgacttggtcagatcaggcctgtaatagttgtcgccaacctgg 420
|||||||| ||||||||| ||||||||| ||||||||||| |||||||||| ||||||
Sbjct: 428 ctcagccttgcaagggccggcttggtcaggtcaggcctgtagtagttgtcgcatacctgg 369
Query: 421 tttttcacagccttggccatcttgcggaactccttgcgcattacagacttgtggctgagc 480
|| || |||| |||||||||||||||||||||||||||||| | || |||||| ||||
Sbjct: 368 ttcttgacagacttggccatcttgcggaactccttgcgcatcagagtcttgtgctggagc 309
Query: 481 ttcgcgggtgtgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt 540
|| || || ||||||||||||||||||||||| || || ||||| |||||| ||||| |
Sbjct: 308 ttggcaggggtgttctgcttcttggtcttggtcgtggacaggacgacagccttgtcctct 249
Query: 541 ccagcagctggctggatcgttacagttttcttgtttgctaagccagagtacttgtaggag 600
|| || | |||||||| | || || || |||| || ||||| ||| |||||||||||
Sbjct: 248 cccgctgatggctggacagccacggtcttgctgttcgccaagcccgagaacttgtaggag 189
Query: 601 tgtacattgtagaggttgttgggctccttggtgaactgcaccttggcattgccgttgcca 660
|| ||||||||||||||||||||||||||| ||||||| |||||||| |||| ||||||
Sbjct: 188 tggacattgtagaggttgttgggctccttgctgaactgtaccttggcgttgctgttgccg 129
Query: 661 aactgcttcaccaggaaggagttgttcttcctcacaatctgccagatcagatcccctgga 720
|||||||| | || |||| ||||||||||| |||| | || ||||| |||| || |||
Sbjct: 128 aactgcttgatcaagaagcagttgttcttcttcacgagctcccagaccagagatcccgga 69
Query: 721 acggtcgccatttcccttcgccggagatgaggt-gcctcggcgtcgcctcgctctgttcc 779
||||| | |||||||||| |||||||||||||| ||| ||||| ||||| |||||| |||
Sbjct: 68 acggtagtcatttcccttggccggagatgaggtcgccgcggcgccgccttgctctgctcc 9
Query: 780 g 780
|
Sbjct: 8 g 8
>gb|AV916786.1|AV916786 AV916786 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags19k08 5', mRNA sequence
Length = 608
Score = 373 bits (188), Expect = e-102
Identities = 405/476 (85%), Gaps = 1/476 (0%)
Strand = Plus / Minus
Query: 301 ggctgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtacacagag 360
||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| | |
Sbjct: 498 ggctgcctgttcttcttcttgaccccagacttggaaacctggaggctgcggtacactgcg 439
Query: 361 ctcagcctaccaagggccgacttggtcagatcaggcctgtaatagttgtcgccaacctgg 420
|||||||| ||||||||| ||||||||| ||||||||||| |||||||||| ||||||
Sbjct: 438 ctcagccttgcaagggccggcttggtcaggtcaggcctgtagtagttgtcgcatacctgg 379
Query: 421 tttttcacagccttggccatcttgcggaactccttgcgcattacagacttgtggctgagc 480
|| || |||| |||||||||||||||||||||||||||||| | || |||||| ||||
Sbjct: 378 ttcttgacagacttggccatcttgcggaactccttgcgcatcagagtcttgtgctggagc 319
Query: 481 ttcgcgggtgtgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt 540
|| || || ||||||||||||||||||||||| || || ||||| |||||| ||||| |
Sbjct: 318 ttggcaggggtgttctgcttcttggtcttggtcgtggacaggacgacagccttgtcctct 259
Query: 541 ccagcagctggctggatcgttacagttttcttgtttgctaagccagagtacttgtaggag 600
|| || | |||||||| | || || || |||| || ||||| ||| |||||||||||
Sbjct: 258 cccgctgatggctggacagccacggtcttgctgttcgccaagcccgagaacttgtaggag 199
Query: 601 tgtacattgtagaggttgttgggctccttggtgaactgcaccttggcattgccgttgcca 660
|| ||||||||||||||||||||||||||| ||||||| |||||||| |||| ||||||
Sbjct: 198 tggacattgtagaggttgttgggctccttgctgaactgtaccttggcgttgctgttgccg 139
Query: 661 aactgcttcaccaggaaggagttgttcttcctcacaatctgccagatcagatcccctgga 720
|||||||| | || |||| ||||||||||| |||| | || ||||| |||| || |||
Sbjct: 138 aactgcttgatcaagaagcagttgttcttcttcacgagctcccagaccagagatcccgga 79
Query: 721 acggtcgccatttcccttcgccggagatgaggt-gcctcggcgtcgcctcgctctg 775
||||| | |||||||||| |||||||||||||| ||| ||||| ||||| ||||||
Sbjct: 78 acggtagtcatttcccttggccggagatgaggtcgccgcggcgccgccttgctctg 23
>gb|BM368848.2|BM368848 EBem08_SQ004_M09_R embryo, 40 DPA, no treatment, cv Optic, EBem08
Hordeum vulgare subsp. vulgare cDNA clone
EBem08_SQ004_M09 5', mRNA sequence
Length = 566
Score = 373 bits (188), Expect = e-102
Identities = 405/476 (85%), Gaps = 1/476 (0%)
Strand = Plus / Minus
Query: 301 ggctgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtacacagag 360
||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| | |
Sbjct: 477 ggctgcctgttcttcttcttgaccccagacttggaaacctggaggctgcggtacactgcg 418
Query: 361 ctcagcctaccaagggccgacttggtcagatcaggcctgtaatagttgtcgccaacctgg 420
|||||||| ||||||||| ||||||||| ||||||||||| |||||||||| ||||||
Sbjct: 417 ctcagccttgcaagggccggcttggtcaggtcaggcctgtagtagttgtcgcatacctgg 358
Query: 421 tttttcacagccttggccatcttgcggaactccttgcgcattacagacttgtggctgagc 480
|| || |||| |||||||||||||||||||||||||||||| | || |||||| ||||
Sbjct: 357 ttcttgacagacttggccatcttgcggaactccttgcgcatcagagtcttgtgctggagc 298
Query: 481 ttcgcgggtgtgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt 540
|| || || ||||||||||||||||||||||| || || ||||| |||||| ||||| |
Sbjct: 297 ttggcaggggtgttctgcttcttggtcttggtcgtggacaggacgacagccttgtcctct 238
Query: 541 ccagcagctggctggatcgttacagttttcttgtttgctaagccagagtacttgtaggag 600
|| || | |||||||| | || || || |||| || ||||| ||| |||||||||||
Sbjct: 237 cccgctgatggctggacagccacggtcttgctgttcgccaagcccgagaacttgtaggag 178
Query: 601 tgtacattgtagaggttgttgggctccttggtgaactgcaccttggcattgccgttgcca 660
|| ||||||||||||||||||||||||||| ||||||| |||||||| |||| ||||||
Sbjct: 177 tggacattgtagaggttgttgggctccttgctgaactgtaccttggcgttgctgttgccg 118
Query: 661 aactgcttcaccaggaaggagttgttcttcctcacaatctgccagatcagatcccctgga 720
|||||||| | || |||| ||||||||||| |||| | || ||||| |||| || |||
Sbjct: 117 aactgcttgatcaagaagcagttgttcttcttcacgagctcccagaccagagatcccgga 58
Query: 721 acggtcgccatttcccttcgccggagatgaggt-gcctcggcgtcgcctcgctctg 775
||||| | |||||||||| |||||||||||||| ||| ||||| ||||| ||||||
Sbjct: 57 acggtagtcatttcccttggccggagatgaggtcgccgcggcgccgccttgctctg 2
>gb|BQ768604.1|BQ768604 EBro08_SQ012_M03_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ012_M03 5', mRNA sequence
Length = 650
Score = 373 bits (188), Expect = e-102
Identities = 405/476 (85%), Gaps = 1/476 (0%)
Strand = Plus / Minus
Query: 301 ggctgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtacacagag 360
||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| | |
Sbjct: 477 ggctgcctgttcttcttcttgaccccagacttggaaacctggaggctgcggtacactgcg 418
Query: 361 ctcagcctaccaagggccgacttggtcagatcaggcctgtaatagttgtcgccaacctgg 420
|||||||| ||||||||| ||||||||| ||||||||||| |||||||||| ||||||
Sbjct: 417 ctcagccttgcaagggccggcttggtcaggtcaggcctgtagtagttgtcgcatacctgg 358
Query: 421 tttttcacagccttggccatcttgcggaactccttgcgcattacagacttgtggctgagc 480
|| || |||| |||||||||||||||||||||||||||||| | || |||||| ||||
Sbjct: 357 ttcttgacagacttggccatcttgcggaactccttgcgcatcagagtcttgtgctggagc 298
Query: 481 ttcgcgggtgtgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt 540
|| || || ||||||||||||||||||||||| || || ||||| |||||| ||||| |
Sbjct: 297 ttggcaggggtgttctgcttcttggtcttggtcgtggacaggacgacagccttgtcctct 238
Query: 541 ccagcagctggctggatcgttacagttttcttgtttgctaagccagagtacttgtaggag 600
|| || | |||||||| | || || || |||| || ||||| ||| |||||||||||
Sbjct: 237 cccgctgatggctggacagccacggtcttgctgttcgccaagcccgagaacttgtaggag 178
Query: 601 tgtacattgtagaggttgttgggctccttggtgaactgcaccttggcattgccgttgcca 660
|| ||||||||||||||||||||||||||| ||||||| |||||||| |||| ||||||
Sbjct: 177 tggacattgtagaggttgttgggctccttgctgaactgtaccttggcgttgctgttgccg 118
Query: 661 aactgcttcaccaggaaggagttgttcttcctcacaatctgccagatcagatcccctgga 720
|||||||| | || |||| ||||||||||| |||| | || ||||| |||| || |||
Sbjct: 117 aactgcttgatcaagaagcagttgttcttcttcacgagctcccagaccagagatcccgga 58
Query: 721 acggtcgccatttcccttcgccggagatgaggt-gcctcggcgtcgcctcgctctg 775
||||| | |||||||||| |||||||||||||| ||| ||||| ||||| ||||||
Sbjct: 57 acggtagtcatttcccttggccggagatgaggtcgccgcggcgccgccttgctctg 2
>gb|BU988528.1|BU988528 HF17O10r HF Hordeum vulgare subsp. vulgare cDNA clone HF17O10
5-PRIME, mRNA sequence
Length = 483
Score = 373 bits (188), Expect = e-102
Identities = 408/480 (85%), Gaps = 1/480 (0%)
Strand = Plus / Minus
Query: 303 ctgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtacacagagct 362
||||||||||||||||||||| |||||||||| ||||||||||||||||||||| | |||
Sbjct: 483 ctgcctgttcttcttcttgaccccagacttggaaacctggaggctgcggtacactgcgct 424
Query: 363 cagcctaccaagggccgacttggtcagatcaggcctgtaatagttgtcgccaacctggtt 422
|||||| ||||||||| ||||||||| ||||||||||| |||||||||| ||||||||
Sbjct: 423 cagccttgcaagggccggcttggtcaggtcaggcctgtagtagttgtcgcatacctggtt 364
Query: 423 tttcacagccttggccatcttgcggaactccttgcgcattacagacttgtggctgagctt 482
|| |||| |||||||||||||||||||||||||||||| | || |||||| ||||||
Sbjct: 363 cttgacagacttggccatcttgcggaactccttgcgcatcagagtcttgtgctggagctt 304
Query: 483 cgcgggtgtgttctgcttcttggtcttggtagtagagaggaccacagccgagtcctttcc 542
|| || ||||||||||||||||||||||| || || ||||| |||||| ||||| |||
Sbjct: 303 ggcaggggtgttctgcttcttggtcttggtcgtggacaggacgacagccttgtcctctcc 244
Query: 543 agcagctggctggatcgttacagttttcttgtttgctaagccagagtacttgtaggagtg 602
|| | |||||||| | || || || |||| || ||||| ||| |||||||||||||
Sbjct: 243 cgctgatggctggacagccacggtcttgctgttcgccaagcccgagaacttgtaggagtg 184
Query: 603 tacattgtagaggttgttgggctccttggtgaactgcaccttggcattgccgttgccaaa 662
||||||||||||||||||||||||||| ||||||| |||||||| |||| |||||| ||
Sbjct: 183 gacattgtagaggttgttgggctccttgctgaactgtaccttggcgttgctgttgccgaa 124
Query: 663 ctgcttcaccaggaaggagttgttcttcctcacaatctgccagatcagatcccctggaac 722
|||||| | || |||| ||||||||||| |||| | || ||||| |||| || |||||
Sbjct: 123 ctgcttgatcaagaagcagttgttcttcttcacgagctcccagaccagagatcccggaac 64
Query: 723 ggtcgccatttcccttcgccggagatgaggt-gcctcggcgtcgcctcgctctgttccgg 781
||| | |||||||||| |||||||||||||| ||| ||||| ||||| |||||| |||||
Sbjct: 63 ggtagtcatttcccttggccggagatgaggtcgccgcggcgccgccttgctctgctccgg 4
>gb|BF622691.2|BF622691 HVSMEa0007O05f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0007O05f, mRNA sequence
Length = 701
Score = 369 bits (186), Expect = e-100
Identities = 409/482 (84%), Gaps = 1/482 (0%)
Strand = Plus / Minus
Query: 301 ggctgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtacacagag 360
||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| | |
Sbjct: 488 ggctgcctgttcttcttcttgaccccagacttggaaacctggaggctgcggtacactgcg 429
Query: 361 ctcagcctaccaagggccgacttggtcagatcaggcctgtaatagttgtcgccaacctgg 420
||||||| ||||||||| ||||||||| ||||||||||| |||||||||| ||||||
Sbjct: 428 gtcagccttgcaagggccggcttggtcaggtcaggcctgtagtagttgtcgcatacctgg 369
Query: 421 tttttcacagccttggccatcttgcggaactccttgcgcattacagacttgtggctgagc 480
|| || |||| |||||||||||||||||||||||||||||| | || |||||| ||||
Sbjct: 368 ttcttgacagacttggccatcttgcggaactccttgcgcatcagagtcttgtgctggagc 309
Query: 481 ttcgcgggtgtgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt 540
|| || || ||||||||||||||||||||||| || || ||||| |||||| ||||| |
Sbjct: 308 ttggcaggggtgttctgcttcttggtcttggtcgtggacaggacgacagccttgtcctct 249
Query: 541 ccagcagctggctggatcgttacagttttcttgtttgctaagccagagtacttgtaggag 600
|| || | |||||||| | || || || |||| || ||||| ||| |||||||||||
Sbjct: 248 cccgctgatggctggacagccacggtcttgctgttcgccaagcccgagaacttgtaggag 189
Query: 601 tgtacattgtagaggttgttgggctccttggtgaactgcaccttggcattgccgttgcca 660
|| ||||||||||||||||||||||||||| ||||||| |||||||| |||| ||||||
Sbjct: 188 tggacattgtagaggttgttgggctccttgctgaactgtaccttggcgttgctgttgccg 129
Query: 661 aactgcttcaccaggaaggagttgttcttcctcacaatctgccagatcagatcccctgga 720
|||||||| | || |||| ||||||||||| |||| | || ||||| |||| || |||
Sbjct: 128 aactgcttgatcaagaagcagttgttcttcttcacgagctcccagaccagagatcccgga 69
Query: 721 acggtcgccatttcccttcgccggagatgaggt-gcctcggcgtcgcctcgctctgttcc 779
||||| | |||||||||| |||||||||||||| ||| ||||| ||||| |||||| |||
Sbjct: 68 acggtagtcatttcccttggccggagatgaggtcgccgcggcgccgccttgctctgctcc 9
Query: 780 gg 781
||
Sbjct: 8 gg 7
>gb|BG418184.2|BG418184 HVSMEk0021M15f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0021M15f, mRNA sequence
Length = 671
Score = 369 bits (186), Expect = e-100
Identities = 409/482 (84%), Gaps = 1/482 (0%)
Strand = Plus / Minus
Query: 301 ggctgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtacacagag 360
|||||||||||| |||||||||| |||||||||| ||||||||||||||||||||| | |
Sbjct: 493 ggctgcctgttcctcttcttgaccccagacttggaaacctggaggctgcggtacactgcg 434
Query: 361 ctcagcctaccaagggccgacttggtcagatcaggcctgtaatagttgtcgccaacctgg 420
|||||||| ||||||||| ||||||||| ||||||||||| |||||||||| ||||||
Sbjct: 433 ctcagccttgcaagggccggcttggtcaggtcaggcctgtagtagttgtcgcatacctgg 374
Query: 421 tttttcacagccttggccatcttgcggaactccttgcgcattacagacttgtggctgagc 480
|| || |||| |||||||||||||||||||||||||||||| | || |||||| ||||
Sbjct: 373 ttcttgacagacttggccatcttgcggaactccttgcgcatcagagtcttgtgctggagc 314
Query: 481 ttcgcgggtgtgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt 540
|| || || ||||||||||||||||||||||| || || ||||| |||||| ||||| |
Sbjct: 313 ttggcaggggtgttctgcttcttggtcttggtcgtggacaggacgacagccttgtcctct 254
Query: 541 ccagcagctggctggatcgttacagttttcttgtttgctaagccagagtacttgtaggag 600
|| || | |||||||| | || || || |||| || ||||| ||| |||||||||||
Sbjct: 253 cccgctgatggctggacagccacggtcttgctgttcgccaagcccgagaacttgtaggag 194
Query: 601 tgtacattgtagaggttgttgggctccttggtgaactgcaccttggcattgccgttgcca 660
|| ||||||||||||||||||||||||||| ||||||| |||||||| |||| ||||||
Sbjct: 193 tggacattgtagaggttgttgggctccttgctgaactgtaccttggcgttgctgttgccg 134
Query: 661 aactgcttcaccaggaaggagttgttcttcctcacaatctgccagatcagatcccctgga 720
|||||||| | || |||| ||||||||||| |||| | || ||||| |||| || |||
Sbjct: 133 aactgcttgatcaagaagcagttgttcttcttcacgagctcccagaccagagatcccgga 74
Query: 721 acggtcgccatttcccttcgccggagatgaggt-gcctcggcgtcgcctcgctctgttcc 779
||||| | |||||||||| |||||||||||||| ||| ||||| ||||| |||||| |||
Sbjct: 73 acggtagtcatttcccttggccggagatgaggtcgccgcggcgccgccttgctctgctcc 14
Query: 780 gg 781
||
Sbjct: 13 gg 12
>gb|BM377572.2|BM377572 EBem04_SQ003_I19_R embryo, 12 DPA, no treatment, cv Optic, EBem04
Hordeum vulgare subsp. vulgare cDNA clone
EBem04_SQ003_I19 5', mRNA sequence
Length = 599
Score = 367 bits (185), Expect = e-100
Identities = 386/453 (85%)
Strand = Plus / Minus
Query: 301 ggctgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtacacagag 360
||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| | |
Sbjct: 465 ggctgcctgttcttcttcttgaccccagacttggaaacctggaggctgcggtacactgcg 406
Query: 361 ctcagcctaccaagggccgacttggtcagatcaggcctgtaatagttgtcgccaacctgg 420
|||||||| ||||||||| ||||||||| ||||||||||| |||||||||| ||||||
Sbjct: 405 ctcagccttgcaagggccggcttggtcaggtcaggcctgtagtagttgtcgcatacctgg 346
Query: 421 tttttcacagccttggccatcttgcggaactccttgcgcattacagacttgtggctgagc 480
|| || |||| |||||||||||||||||||||||||||||| | || |||||| ||||
Sbjct: 345 ttcttgacagacttggccatcttgcggaactccttgcgcatcagagtcttgtgctggagc 286
Query: 481 ttcgcgggtgtgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt 540
|| || || ||||||||||||||||||||||| || || ||||| |||||| ||||| |
Sbjct: 285 ttggcaggggtgttctgcttcttggtcttggtcgtggacaggacgacagccttgtcctct 226
Query: 541 ccagcagctggctggatcgttacagttttcttgtttgctaagccagagtacttgtaggag 600
|| || | |||||||| | || || || |||| || ||||| ||| |||||||||||
Sbjct: 225 cccgctgatggctggacagccacggtcttgctgttcgccaagcccgagaacttgtaggag 166
Query: 601 tgtacattgtagaggttgttgggctccttggtgaactgcaccttggcattgccgttgcca 660
|| ||||||||||||||||||||||||||| ||||||| |||||||| |||| ||||||
Sbjct: 165 tggacattgtagaggttgttgggctccttgctgaactgtaccttggcgttgctgttgccg 106
Query: 661 aactgcttcaccaggaaggagttgttcttcctcacaatctgccagatcagatcccctgga 720
|||||||| | || |||| ||||||||||| |||| | || ||||| |||| || |||
Sbjct: 105 aactgcttgatcaagaagcagttgttcttcttcacgagctcccagaccagagatcccgga 46
Query: 721 acggtcgccatttcccttcgccggagatgaggt 753
||||| | |||||||||| ||||||||||||||
Sbjct: 45 acggtagtcatttcccttggccggagatgaggt 13
>gb|BI780201.2|BI780201 EBma08_SQ001_L02_R maternal, 28 DPA, no treatment, cv Optic, EBma08
Hordeum vulgare subsp. vulgare cDNA clone
EBma08_SQ001_L02 5', mRNA sequence
Length = 623
Score = 367 bits (185), Expect = e-100
Identities = 386/453 (85%)
Strand = Plus / Minus
Query: 301 ggctgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtacacagag 360
||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| | |
Sbjct: 467 ggctgcctgttcttcttcttgaccccagacttggaaacctggaggctgcggtacactgcg 408
Query: 361 ctcagcctaccaagggccgacttggtcagatcaggcctgtaatagttgtcgccaacctgg 420
|||||||| ||||||||| ||||||||| ||||||||||| |||||||||| ||||||
Sbjct: 407 ctcagccttgcaagggccggcttggtcaggtcaggcctgtagtagttgtcgcatacctgg 348
Query: 421 tttttcacagccttggccatcttgcggaactccttgcgcattacagacttgtggctgagc 480
|| || |||| |||||||||||||||||||||||||||||| | || |||||| ||||
Sbjct: 347 ttcttgacagacttggccatcttgcggaactccttgcgcatcagagtcttgtgctggagc 288
Query: 481 ttcgcgggtgtgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt 540
|| || || ||||||||||||||||||||||| || || ||||| |||||| ||||| |
Sbjct: 287 ttggcaggggtgttctgcttcttggtcttggtcgtggacaggacgacagccttgtcctct 228
Query: 541 ccagcagctggctggatcgttacagttttcttgtttgctaagccagagtacttgtaggag 600
|| || | |||||||| | || || || |||| || ||||| ||| |||||||||||
Sbjct: 227 cccgctgatggctggacagccacggtcttgctgttcgccaagcccgagaacttgtaggag 168
Query: 601 tgtacattgtagaggttgttgggctccttggtgaactgcaccttggcattgccgttgcca 660
|| ||||||||||||||||||||||||||| ||||||| |||||||| |||| ||||||
Sbjct: 167 tggacattgtagaggttgttgggctccttgctgaactgtaccttggcgttgctgttgccg 108
Query: 661 aactgcttcaccaggaaggagttgttcttcctcacaatctgccagatcagatcccctgga 720
|||||||| | || |||| ||||||||||| |||| | || ||||| |||| || |||
Sbjct: 107 aactgcttgatcaagaagcagttgttcttcttcacgagctcccagaccagagatcccgga 48
Query: 721 acggtcgccatttcccttcgccggagatgaggt 753
||||| | |||||||||| ||||||||||||||
Sbjct: 47 acggtagtcatttcccttggccggagatgaggt 15
>gb|BU997207.1|BU997207 HI07E02r HI Hordeum vulgare subsp. vulgare cDNA clone HI07E02
5-PRIME, mRNA sequence
Length = 633
Score = 367 bits (185), Expect = e-100
Identities = 386/453 (85%)
Strand = Plus / Minus
Query: 301 ggctgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtacacagag 360
||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| | |
Sbjct: 495 ggctgcctgttcttcttcttgaccccagacttggaaacctggaggctgcggtacactgcg 436
Query: 361 ctcagcctaccaagggccgacttggtcagatcaggcctgtaatagttgtcgccaacctgg 420
|||||||| ||||||||| ||||||||| ||||||||||| |||||||||| ||||||
Sbjct: 435 ctcagccttgcaagggccggcttggtcaggtcaggcctgtagtagttgtcgcatacctgg 376
Query: 421 tttttcacagccttggccatcttgcggaactccttgcgcattacagacttgtggctgagc 480
|| || |||| |||||||||||||||||||||||||||||| | || |||||| ||||
Sbjct: 375 ttcttgacagacttggccatcttgcggaactccttgcgcatcagagtcttgtgctggagc 316
Query: 481 ttcgcgggtgtgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt 540
|| || || ||||||||||||||||||||||| || || ||||| |||||| ||||| |
Sbjct: 315 ttggcaggggtgttctgcttcttggtcttggtcgtggacaggacgacagccttgtcctct 256
Query: 541 ccagcagctggctggatcgttacagttttcttgtttgctaagccagagtacttgtaggag 600
|| || | |||||||| | || || || |||| || ||||| ||| |||||||||||
Sbjct: 255 cccgctgatggctggacagccacggtcttgctgttcgccaagcccgagaacttgtaggag 196
Query: 601 tgtacattgtagaggttgttgggctccttggtgaactgcaccttggcattgccgttgcca 660
|| ||||||||||||||||||||||||||| ||||||| |||||||| |||| ||||||
Sbjct: 195 tggacattgtagaggttgttgggctccttgctgaactgtaccttggcgttgctgttgccg 136
Query: 661 aactgcttcaccaggaaggagttgttcttcctcacaatctgccagatcagatcccctgga 720
|||||||| | || |||| ||||||||||| |||| | || ||||| |||| || |||
Sbjct: 135 aactgcttgatcaagaagcagttgttcttcttcacgagctcccagaccagagatcccgga 76
Query: 721 acggtcgccatttcccttcgccggagatgaggt 753
||||| | |||||||||| ||||||||||||||
Sbjct: 75 acggtagtcatttcccttggccggagatgaggt 43
>gb|BU998716.1|BU998716 HI11P08r HI Hordeum vulgare subsp. vulgare cDNA clone HI11P08
5-PRIME, mRNA sequence
Length = 605
Score = 367 bits (185), Expect = e-100
Identities = 386/453 (85%)
Strand = Plus / Minus
Query: 301 ggctgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtacacagag 360
||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| | |
Sbjct: 469 ggctgcctgttcttcttcttgaccccagacttggaaacctggaggctgcggtacactgcg 410
Query: 361 ctcagcctaccaagggccgacttggtcagatcaggcctgtaatagttgtcgccaacctgg 420
|||||||| ||||||||| ||||||||| ||||||||||| |||||||||| ||||||
Sbjct: 409 ctcagccttgcaagggccggcttggtcaggtcaggcctgtagtagttgtcgcatacctgg 350
Query: 421 tttttcacagccttggccatcttgcggaactccttgcgcattacagacttgtggctgagc 480
|| || |||| |||||||||||||||||||||||||||||| | || |||||| ||||
Sbjct: 349 ttcttgacagacttggccatcttgcggaactccttgcgcatcagagtcttgtgctggagc 290
Query: 481 ttcgcgggtgtgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt 540
|| || || ||||||||||||||||||||||| || || ||||| |||||| ||||| |
Sbjct: 289 ttggcaggggtgttctgcttcttggtcttggtcgtggacaggacgacagccttgtcctct 230
Query: 541 ccagcagctggctggatcgttacagttttcttgtttgctaagccagagtacttgtaggag 600
|| || | |||||||| | || || || |||| || ||||| ||| |||||||||||
Sbjct: 229 cccgctgatggctggacagccacggtcttgctgttcgccaagcccgagaacttgtaggag 170
Query: 601 tgtacattgtagaggttgttgggctccttggtgaactgcaccttggcattgccgttgcca 660
|| ||||||||||||||||||||||||||| ||||||| |||||||| |||| ||||||
Sbjct: 169 tggacattgtagaggttgttgggctccttgctgaactgtaccttggcgttgctgttgccg 110
Query: 661 aactgcttcaccaggaaggagttgttcttcctcacaatctgccagatcagatcccctgga 720
|||||||| | || |||| ||||||||||| |||| | || ||||| |||| || |||
Sbjct: 109 aactgcttgatcaagaagcagttgttcttcttcacgagctcccagaccagagatcccgga 50
Query: 721 acggtcgccatttcccttcgccggagatgaggt 753
||||| | |||||||||| ||||||||||||||
Sbjct: 49 acggtagtcatttcccttggccggagatgaggt 17
>gb|CA024430.1|CA024430 HZ49E17r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ49E17
5-PRIME, mRNA sequence
Length = 544
Score = 367 bits (185), Expect = e-100
Identities = 386/453 (85%)
Strand = Plus / Minus
Query: 301 ggctgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtacacagag 360
||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| | |
Sbjct: 471 ggctgcctgttcttcttcttgaccccagacttggaaacctggaggctgcggtacactgcg 412
Query: 361 ctcagcctaccaagggccgacttggtcagatcaggcctgtaatagttgtcgccaacctgg 420
|||||||| ||||||||| ||||||||| ||||||||||| |||||||||| ||||||
Sbjct: 411 ctcagccttgcaagggccggcttggtcaggtcaggcctgtagtagttgtcgcatacctgg 352
Query: 421 tttttcacagccttggccatcttgcggaactccttgcgcattacagacttgtggctgagc 480
|| || |||| |||||||||||||||||||||||||||||| | || |||||| ||||
Sbjct: 351 ttcttgacagacttggccatcttgcggaactccttgcgcatcagagtcttgtgctggagc 292
Query: 481 ttcgcgggtgtgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt 540
|| || || ||||||||||||||||||||||| || || ||||| |||||| ||||| |
Sbjct: 291 ttggcaggggtgttctgcttcttggtcttggtcgtggacaggacgacagccttgtcctct 232
Query: 541 ccagcagctggctggatcgttacagttttcttgtttgctaagccagagtacttgtaggag 600
|| || | |||||||| | || || || |||| || ||||| ||| |||||||||||
Sbjct: 231 cccgctgatggctggacagccacggtcttgctgttcgccaagcccgagaacttgtaggag 172
Query: 601 tgtacattgtagaggttgttgggctccttggtgaactgcaccttggcattgccgttgcca 660
|| ||||||||||||||||||||||||||| ||||||| |||||||| |||| ||||||
Sbjct: 171 tggacattgtagaggttgttgggctccttgctgaactgtaccttggcgttgctgttgccg 112
Query: 661 aactgcttcaccaggaaggagttgttcttcctcacaatctgccagatcagatcccctgga 720
|||||||| | || |||| ||||||||||| |||| | || ||||| |||| || |||
Sbjct: 111 aactgcttgatcaagaagcagttgttcttcttcacgagctcccagaccagagatcccgga 52
Query: 721 acggtcgccatttcccttcgccggagatgaggt 753
||||| | |||||||||| ||||||||||||||
Sbjct: 51 acggtagtcatttcccttggccggagatgaggt 19
>gb|CA030983.1|CA030983 HX08L01r HX Hordeum vulgare subsp. vulgare cDNA clone HX08L01
5-PRIME, mRNA sequence
Length = 647
Score = 367 bits (185), Expect = e-100
Identities = 386/453 (85%)
Strand = Plus / Minus
Query: 301 ggctgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtacacagag 360
||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| | |
Sbjct: 506 ggctgcctgttcttcttcttgaccccagacttggaaacctggaggctgcggtacactgcg 447
Query: 361 ctcagcctaccaagggccgacttggtcagatcaggcctgtaatagttgtcgccaacctgg 420
|||||||| ||||||||| ||||||||| ||||||||||| |||||||||| ||||||
Sbjct: 446 ctcagccttgcaagggccggcttggtcaggtcaggcctgtagtagttgtcgcatacctgg 387
Query: 421 tttttcacagccttggccatcttgcggaactccttgcgcattacagacttgtggctgagc 480
|| || |||| |||||||||||||||||||||||||||||| | || |||||| ||||
Sbjct: 386 ttcttgacagacttggccatcttgcggaactccttgcgcatcagagtcttgtgctggagc 327
Query: 481 ttcgcgggtgtgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt 540
|| || || ||||||||||||||||||||||| || || ||||| |||||| ||||| |
Sbjct: 326 ttggcaggggtgttctgcttcttggtcttggtcgtggacaggacgacagccttgtcctct 267
Query: 541 ccagcagctggctggatcgttacagttttcttgtttgctaagccagagtacttgtaggag 600
|| || | |||||||| | || || || |||| || ||||| ||| |||||||||||
Sbjct: 266 cccgctgatggctggacagccacggtcttgctgttcgccaagcccgagaacttgtaggag 207
Query: 601 tgtacattgtagaggttgttgggctccttggtgaactgcaccttggcattgccgttgcca 660
|| ||||||||||||||||||||||||||| ||||||| |||||||| |||| ||||||
Sbjct: 206 tggacattgtagaggttgttgggctccttgctgaactgtaccttggcgttgctgttgccg 147
Query: 661 aactgcttcaccaggaaggagttgttcttcctcacaatctgccagatcagatcccctgga 720
|||||||| | || |||| ||||||||||| |||| | || ||||| |||| || |||
Sbjct: 146 aactgcttgatcaagaagcagttgttcttcttcacgagctcccagaccagagatcccgga 87
Query: 721 acggtcgccatttcccttcgccggagatgaggt 753
||||| | |||||||||| ||||||||||||||
Sbjct: 86 acggtagtcatttcccttggccggagatgaggt 54
>gb|CA033025.1|CA033025 HX14O09r HX Hordeum vulgare subsp. vulgare cDNA clone HX14O09
5-PRIME, mRNA sequence
Length = 611
Score = 367 bits (185), Expect = e-100
Identities = 386/453 (85%)
Strand = Plus / Minus
Query: 301 ggctgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtacacagag 360
||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| | |
Sbjct: 481 ggctgcctgttcttcttcttgaccccagacttggaaacctggaggctgcggtacactgcg 422
Query: 361 ctcagcctaccaagggccgacttggtcagatcaggcctgtaatagttgtcgccaacctgg 420
|||||||| ||||||||| ||||||||| ||||||||||| |||||||||| ||||||
Sbjct: 421 ctcagccttgcaagggccggcttggtcaggtcaggcctgtagtagttgtcgcatacctgg 362
Query: 421 tttttcacagccttggccatcttgcggaactccttgcgcattacagacttgtggctgagc 480
|| || |||| |||||||||||||||||||||||||||||| | || |||||| ||||
Sbjct: 361 ttcttgacagacttggccatcttgcggaactccttgcgcatcagagtcttgtgctggagc 302
Query: 481 ttcgcgggtgtgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt 540
|| || || ||||||||||||||||||||||| || || ||||| |||||| ||||| |
Sbjct: 301 ttggcaggggtgttctgcttcttggtcttggtcgtggacaggacgacagccttgtcctct 242
Query: 541 ccagcagctggctggatcgttacagttttcttgtttgctaagccagagtacttgtaggag 600
|| || | |||||||| | || || || |||| || ||||| ||| |||||||||||
Sbjct: 241 cccgctgatggctggacagccacggtcttgctgttcgccaagcccgagaacttgtaggag 182
Query: 601 tgtacattgtagaggttgttgggctccttggtgaactgcaccttggcattgccgttgcca 660
|| ||||||||||||||||||||||||||| ||||||| |||||||| |||| ||||||
Sbjct: 181 tggacattgtagaggttgttgggctccttgctgaactgtaccttggcgttgctgttgccg 122
Query: 661 aactgcttcaccaggaaggagttgttcttcctcacaatctgccagatcagatcccctgga 720
|||||||| | || |||| ||||||||||| |||| | || ||||| |||| || |||
Sbjct: 121 aactgcttgatcaagaagcagttgttcttcttcacgagctcccagaccagagatcccgga 62
Query: 721 acggtcgccatttcccttcgccggagatgaggt 753
||||| | |||||||||| ||||||||||||||
Sbjct: 61 acggtagtcatttcccttggccggagatgaggt 29
>gb|CV058173.1|CV058173 BNEL35b2 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL35b2 5' similar to putative 60S
ribosomal L28 protein, mRNA sequence
Length = 603
Score = 367 bits (185), Expect = e-100
Identities = 386/453 (85%)
Strand = Plus / Minus
Query: 301 ggctgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtacacagag 360
||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| | |
Sbjct: 489 ggctgcctgttcttcttcttgaccccagacttggaaacctggaggctgcggtacactgcg 430
Query: 361 ctcagcctaccaagggccgacttggtcagatcaggcctgtaatagttgtcgccaacctgg 420
|||||||| ||||||||| ||||||||| ||||||||||| |||||||||| ||||||
Sbjct: 429 ctcagccttgcaagggccggcttggtcaggtcaggcctgtagtagttgtcgcatacctgg 370
Query: 421 tttttcacagccttggccatcttgcggaactccttgcgcattacagacttgtggctgagc 480
|| || |||| |||||||||||||||||||||||||||||| | || |||||| ||||
Sbjct: 369 ttcttgacagacttggccatcttgcggaactccttgcgcatcagagtcttgtgctggagc 310
Query: 481 ttcgcgggtgtgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt 540
|| || || ||||||||||||||||||||||| || || ||||| |||||| ||||| |
Sbjct: 309 ttggcaggggtgttctgcttcttggtcttggtcgtggacaggacgacagccttgtcctct 250
Query: 541 ccagcagctggctggatcgttacagttttcttgtttgctaagccagagtacttgtaggag 600
|| || | |||||||| | || || || |||| || ||||| ||| |||||||||||
Sbjct: 249 cccgctgatggctggacagccacggtcttgctgttcgccaagcccgagaacttgtaggag 190
Query: 601 tgtacattgtagaggttgttgggctccttggtgaactgcaccttggcattgccgttgcca 660
|| ||||||||||||||||||||||||||| ||||||| |||||||| |||| ||||||
Sbjct: 189 tggacattgtagaggttgttgggctccttgctgaactgtaccttggcgttgctgttgccg 130
Query: 661 aactgcttcaccaggaaggagttgttcttcctcacaatctgccagatcagatcccctgga 720
|||||||| | || |||| ||||||||||| |||| | || ||||| |||| || |||
Sbjct: 129 aactgcttgatcaagaagcagttgttcttcttcacgagctcccagaccagagatcccgga 70
Query: 721 acggtcgccatttcccttcgccggagatgaggt 753
||||| | |||||||||| ||||||||||||||
Sbjct: 69 acggtagtcatttcccttggccggagatgaggt 37
>gb|CK125509.1|CK125509 BES1824108n02 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010N028 5-PRIME, mRNA sequence
Length = 614
Score = 367 bits (185), Expect = e-100
Identities = 386/453 (85%)
Strand = Plus / Minus
Query: 301 ggctgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtacacagag 360
||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| | |
Sbjct: 471 ggctgcctgttcttcttcttgaccccagacttggaaacctggaggctgcggtacactgcg 412
Query: 361 ctcagcctaccaagggccgacttggtcagatcaggcctgtaatagttgtcgccaacctgg 420
|||||||| ||||||||| ||||||||| ||||||||||| |||||||||| ||||||
Sbjct: 411 ctcagccttgcaagggccggcttggtcaggtcaggcctgtagtagttgtcgcatacctgg 352
Query: 421 tttttcacagccttggccatcttgcggaactccttgcgcattacagacttgtggctgagc 480
|| || |||| |||||||||||||||||||||||||||||| | || |||||| ||||
Sbjct: 351 ttcttgacagacttggccatcttgcggaactccttgcgcatcagagtcttgtgctggagc 292
Query: 481 ttcgcgggtgtgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt 540
|| || || ||||||||||||||||||||||| || || ||||| |||||| ||||| |
Sbjct: 291 ttggcaggggtgttctgcttcttggtcttggtcgtggacaggacgacagccttgtcctct 232
Query: 541 ccagcagctggctggatcgttacagttttcttgtttgctaagccagagtacttgtaggag 600
|| || | |||||||| | || || || |||| || ||||| ||| |||||||||||
Sbjct: 231 cccgctgatggctggacagccacggtcttgctgttcgccaagcccgagaacttgtaggag 172
Query: 601 tgtacattgtagaggttgttgggctccttggtgaactgcaccttggcattgccgttgcca 660
|| ||||||||||||||||||||||||||| ||||||| |||||||| |||| ||||||
Sbjct: 171 tggacattgtagaggttgttgggctccttgctgaactgtaccttggcgttgctgttgccg 112
Query: 661 aactgcttcaccaggaaggagttgttcttcctcacaatctgccagatcagatcccctgga 720
|||||||| | || |||| ||||||||||| |||| | || ||||| |||| || |||
Sbjct: 111 aactgcttgatcaagaagcagttgttcttcttcacgagctcccagaccagagatcccgga 52
Query: 721 acggtcgccatttcccttcgccggagatgaggt 753
||||| | |||||||||| ||||||||||||||
Sbjct: 51 acggtagtcatttcccttggccggagatgaggt 19
>gb|BU990354.1|BU990354 HF24M15r HF Hordeum vulgare subsp. vulgare cDNA clone HF24M15
5-PRIME, mRNA sequence
Length = 535
Score = 365 bits (184), Expect = 2e-099
Identities = 385/452 (85%)
Strand = Plus / Minus
Query: 301 ggctgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtacacagag 360
||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| | |
Sbjct: 462 ggctgcctgttcttcttcttgaccccagacttggaaacctggaggctgcggtacactgcg 403
Query: 361 ctcagcctaccaagggccgacttggtcagatcaggcctgtaatagttgtcgccaacctgg 420
|||||||| ||||||||| ||||||||| ||||||||||| |||||||||| ||||||
Sbjct: 402 ctcagccttgcaagggccggcttggtcaggtcaggcctgtagtagttgtcgcatacctgg 343
Query: 421 tttttcacagccttggccatcttgcggaactccttgcgcattacagacttgtggctgagc 480
|| || |||| |||||||||||||||||||||||||||||| | || |||||| ||||
Sbjct: 342 ttcttgacagacttggccatcttgcggaactccttgcgcatcagagtcttgtgctggagc 283
Query: 481 ttcgcgggtgtgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt 540
|| || || ||||||||||||||||||||||| || || ||||| |||||| ||||| |
Sbjct: 282 ttggcaggggtgttctgcttcttggtcttggtcgtggacaggacgacagccttgtcctct 223
Query: 541 ccagcagctggctggatcgttacagttttcttgtttgctaagccagagtacttgtaggag 600
|| || | |||||||| | || || || |||| || ||||| ||| |||||||||||
Sbjct: 222 cccgctgatggctggacagccacggtcttgctgttcgccaagcccgagaacttgtaggag 163
Query: 601 tgtacattgtagaggttgttgggctccttggtgaactgcaccttggcattgccgttgcca 660
|| ||||||||||||||||||||||||||| ||||||| |||||||| |||| ||||||
Sbjct: 162 tggacattgtagaggttgttgggctccttgctgaactgtaccttggcgttgctgttgccg 103
Query: 661 aactgcttcaccaggaaggagttgttcttcctcacaatctgccagatcagatcccctgga 720
|||||||| | || |||| ||||||||||| |||| | || ||||| |||| || |||
Sbjct: 102 aactgcttgatcaagaagcagttgttcttcttcacgagctcccagaccagagatcccgga 43
Query: 721 acggtcgccatttcccttcgccggagatgagg 752
||||| | |||||||||| |||||||||||||
Sbjct: 42 acggtagtcatttcccttggccggagatgagg 11
>gb|BJ448795.1|BJ448795 BJ448795 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak21e08 5', mRNA sequence
Length = 594
Score = 361 bits (182), Expect = 2e-098
Identities = 408/482 (84%), Gaps = 1/482 (0%)
Strand = Plus / Minus
Query: 301 ggctgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtacacagag 360
||||||||||||||||||||||| |||| ||||| ||||||||||||||||||||| | |
Sbjct: 486 ggctgcctgttcttcttcttgactccaggcttggaaacctggaggctgcggtacacggcg 427
Query: 361 ctcagcctaccaagggccgacttggtcagatcaggcctgtaatagttgtcgccaacctgg 420
|||||||| ||||||| | ||||||||||||||||||||| |||||||||| ||||||
Sbjct: 426 ctcagccttgcaagggcaggcttggtcagatcaggcctgtagtagttgtcgcatacctgg 367
Query: 421 tttttcacagccttggccatcttgcggaactccttgcgcattacagacttgtggctgagc 480
|| || |||| |||||||||||||||||||||||||||||| | || |||||| ||||
Sbjct: 366 ttcttgacagacttggccatcttgcggaactccttgcgcatcagagtcttgtgctggagc 307
Query: 481 ttcgcgggtgtgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt 540
|| || || ||||||||||||||||||||| | || || ||||| |||||| ||||| |
Sbjct: 306 ttggcaggggtgttctgcttcttggtcttgatcgtggacaggacgacagccttgtcctct 247
Query: 541 ccagcagctggctggatcgttacagttttcttgtttgctaagccagagtacttgtaggag 600
|| || | |||||||| | || || || |||| || ||||| ||| |||||||||||
Sbjct: 246 cccgctgatggctggacagccacggtcttgctgttcgccaagcccgagaacttgtaggag 187
Query: 601 tgtacattgtagaggttgttgggctccttggtgaactgcaccttggcattgccgttgcca 660
|| ||||||||||||||||||||||||||| ||||||| |||||||| |||| ||||||
Sbjct: 186 tggacattgtagaggttgttgggctccttgctgaactgtaccttggcgttgctgttgccg 127
Query: 661 aactgcttcaccaggaaggagttgttcttcctcacaatctgccagatcagatcccctgga 720
|||||||| | || |||| ||||||||||| |||| | || ||||| |||| || |||
Sbjct: 126 aactgcttgatcaagaagcagttgttcttcttcacgagctcccagaccagagatcccgga 67
Query: 721 acggtcgccatttcccttcgccggagatgaggt-gcctcggcgtcgcctcgctctgttcc 779
||||| | |||||||||| |||||||||||||| ||| ||||| ||||| |||||| |||
Sbjct: 66 acggtagtcatttcccttggccggagatgaggtcgccgcggcgccgccttgctctgctcc 7
Query: 780 gg 781
||
Sbjct: 6 gg 5
>gb|BJ461931.1|BJ461931 BJ461931 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak21e08 3', mRNA sequence
Length = 610
Score = 361 bits (182), Expect = 2e-098
Identities = 408/482 (84%), Gaps = 1/482 (0%)
Strand = Plus / Plus
Query: 301 ggctgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtacacagag 360
||||||||||||||||||||||| |||| ||||| ||||||||||||||||||||| | |
Sbjct: 112 ggctgcctgttcttcttcttgactccaggcttggaaacctggaggctgcggtacacggcg 171
Query: 361 ctcagcctaccaagggccgacttggtcagatcaggcctgtaatagttgtcgccaacctgg 420
|||||||| ||||||| | ||||||||||||||||||||| |||||||||| ||||||
Sbjct: 172 ctcagccttgcaagggcaggcttggtcagatcaggcctgtagtagttgtcgcatacctgg 231
Query: 421 tttttcacagccttggccatcttgcggaactccttgcgcattacagacttgtggctgagc 480
|| || |||| |||||||||||||||||||||||||||||| | || |||||| ||||
Sbjct: 232 ttcttgacagacttggccatcttgcggaactccttgcgcatcagagtcttgtgctggagc 291
Query: 481 ttcgcgggtgtgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt 540
|| || || ||||||||||||||||||||| | || || ||||| |||||| ||||| |
Sbjct: 292 ttggcaggggtgttctgcttcttggtcttgatcgtggacaggacgacagccttgtcctct 351
Query: 541 ccagcagctggctggatcgttacagttttcttgtttgctaagccagagtacttgtaggag 600
|| || | |||||||| | || || || |||| || ||||| ||| |||||||||||
Sbjct: 352 cccgctgatggctggacagccacggtcttgctgttcgccaagcccgagaacttgtaggag 411
Query: 601 tgtacattgtagaggttgttgggctccttggtgaactgcaccttggcattgccgttgcca 660
|| ||||||||||||||||||||||||||| ||||||| |||||||| |||| ||||||
Sbjct: 412 tggacattgtagaggttgttgggctccttgctgaactgtaccttggcgttgctgttgccg 471
Query: 661 aactgcttcaccaggaaggagttgttcttcctcacaatctgccagatcagatcccctgga 720
|||||||| | || |||| ||||||||||| |||| | || ||||| |||| || |||
Sbjct: 472 aactgcttgatcaagaagcagttgttcttcttcacgagctcccagaccagagatcccgga 531
Query: 721 acggtcgccatttcccttcgccggagatgaggt-gcctcggcgtcgcctcgctctgttcc 779
||||| | |||||||||| |||||||||||||| ||| ||||| ||||| |||||| |||
Sbjct: 532 acggtagtcatttcccttggccggagatgaggtcgccgcggcgccgccttgctctgctcc 591
Query: 780 gg 781
||
Sbjct: 592 gg 593
>gb|BI777934.2|BI777934 EBro07_SQ001_G05_R root, 3 week, reduced light, cv Optic, EBro07
Hordeum vulgare subsp. vulgare cDNA clone
EBro07_SQ001_G05 5', mRNA sequence
Length = 474
Score = 361 bits (182), Expect = 2e-098
Identities = 402/474 (84%), Gaps = 1/474 (0%)
Strand = Plus / Minus
Query: 308 tgttcttcttcttgacaccagacttggcaacctggaggctgcggtacacagagctcagcc 367
|||||||||||||||| |||||||||| ||||||||||||||||||||| | ||||||||
Sbjct: 474 tgttcttcttcttgaccccagacttggaaacctggaggctgcggtacactgcgctcagcc 415
Query: 368 taccaagggccgacttggtcagatcaggcctgtaatagttgtcgccaacctggtttttca 427
| ||||||||| ||||||||| ||||||||||| |||||||||| |||||||| || |
Sbjct: 414 ttgcaagggccggcttggtcaggtcaggcctgtagtagttgtcgcatacctggttcttga 355
Query: 428 cagccttggccatcttgcggaactccttgcgcattacagacttgtggctgagcttcgcgg 487
||| |||||||||||||||||||||||||||||| | || |||||| |||||| || |
Sbjct: 354 cagacttggccatcttgcggaactccttgcgcatcagagtcttgtgctggagcttggcag 295
Query: 488 gtgtgttctgcttcttggtcttggtagtagagaggaccacagccgagtcctttccagcag 547
| ||||||||||||||||||||||| || || ||||| |||||| ||||| ||| || |
Sbjct: 294 gggtgttctgcttcttggtcttggtcgtggacaggacgacagccttgtcctctcccgctg 235
Query: 548 ctggctggatcgttacagttttcttgtttgctaagccagagtacttgtaggagtgtacat 607
|||||||| | || || || |||| || ||||| ||| ||||||||||||| ||||
Sbjct: 234 atggctggacagccacggtcttgctgttcgccaagcccgagaacttgtaggagtggacat 175
Query: 608 tgtagaggttgttgggctccttggtgaactgcaccttggcattgccgttgccaaactgct 667
||||||||||||||||||||||| ||||||| |||||||| |||| |||||| |||||||
Sbjct: 174 tgtagaggttgttgggctccttgctgaactgtaccttggcgttgctgttgccgaactgct 115
Query: 668 tcaccaggaaggagttgttcttcctcacaatctgccagatcagatcccctggaacggtcg 727
| | || |||| ||||||||||| |||| | || ||||| |||| || |||||||| |
Sbjct: 114 tgatcaagaagcagttgttcttcttcacgagctcccagaccagagatcccggaacggtag 55
Query: 728 ccatttcccttcgccggagatgaggt-gcctcggcgtcgcctcgctctgttccg 780
|||||||||| |||||||||||||| ||| ||||| ||||| |||||| ||||
Sbjct: 54 tcatttcccttggccggagatgaggtcgccgcggcgccgccttgctctgctccg 1
>gb|CK125918.1|CK125918 BES1824111B1g10 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010G1011 5-PRIME, mRNA sequence
Length = 673
Score = 359 bits (181), Expect = 9e-098
Identities = 407/482 (84%), Gaps = 1/482 (0%)
Strand = Plus / Minus
Query: 301 ggctgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtacacagag 360
||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| | |
Sbjct: 510 ggctgcctgttcttcttcttgaccccagacttggaaacctggaggctgcggtacactgcg 451
Query: 361 ctcagcctaccaagggccgacttggtcagatcaggcctgtaatagttgtcgccaacctgg 420
|||| ||| ||||||||| ||||||||| ||||||||||| |||||||||| ||||||
Sbjct: 450 ctcanccttgcaagggccggcttggtcaggtcaggcctgtagtagttgtcgcatacctgg 391
Query: 421 tttttcacagccttggccatcttgcggaactccttgcgcattacagacttgtggctgagc 480
|| || |||| |||||||||||||||||||||||||||||| | || |||||| ||||
Sbjct: 390 ttcttgacagacttggccatcttgcggaactccttgcgcatcagagtcttgtgctggagc 331
Query: 481 ttcgcgggtgtgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt 540
|| || || ||||||||||||||||||||||| || || ||||| ||| || ||||| |
Sbjct: 330 ttggcaggggtgttctgcttcttggtcttggtcgtggacaggacgacanccttgtcctct 271
Query: 541 ccagcagctggctggatcgttacagttttcttgtttgctaagccagagtacttgtaggag 600
|| || | |||||||| || || || |||| || ||||| ||| |||||||||||
Sbjct: 270 cccgctgatggctggacanccacggtcttgctgttcgccaagcccgagaacttgtaggag 211
Query: 601 tgtacattgtagaggttgttgggctccttggtgaactgcaccttggcattgccgttgcca 660
|| ||||||||||||||||||||||||||| ||||||| |||||||| |||| ||||||
Sbjct: 210 tggacattgtagaggttgttgggctccttgctgaactgtaccttggcgttgctgttgccg 151
Query: 661 aactgcttcaccaggaaggagttgttcttcctcacaatctgccagatcagatcccctgga 720
|||||||| | || |||| ||||||||||| |||| | || ||||| |||| || |||
Sbjct: 150 aactgcttgatcaagaagcagttgttcttcttcacgagctcccagaccagagatcccgga 91
Query: 721 acggtcgccatttcccttcgccggagatgaggt-gcctcggcgtcgcctcgctctgttcc 779
||||| | |||||||||| |||||||||||||| ||| ||||| ||||| |||||| |||
Sbjct: 90 acggtagtcatttcccttggccggagatgaggtcgccgcggcgccgccttgctctgctcc 31
Query: 780 gg 781
||
Sbjct: 30 gg 29
>gb|AL503478.1|AL503478 AL503478 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW02E14T 5', mRNA sequence
Length = 700
Score = 353 bits (178), Expect = 6e-096
Identities = 337/390 (86%)
Strand = Plus / Minus
Query: 303 ctgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtacacagagct 362
||||||||||||||||||||||||||||||||||||||||||||||||||| || | |||
Sbjct: 614 ctgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtaaactgcgct 555
Query: 363 cagcctaccaagggccgacttggtcagatcaggcctgtaatagttgtcgccaacctggtt 422
||| || |||| || | |||||||| ||||||||||| |||||||| | ||||||||
Sbjct: 554 cagtcttgcaagagcaggcttggtcaagtcaggcctgtagtagttgtcactgacctggtt 495
Query: 423 tttcacagccttggccatcttgcggaactccttgcgcattacagacttgtggctgagctt 482
|| ||||||||||||||||||||||||||||||||||| |||| ||||||| |||
Sbjct: 494 cttgacagccttggccatcttgcggaactccttgcgcatgacagtcttgtgggtgaaggc 435
Query: 483 cgcgggtgtgttctgcttcttggtcttggtagtagagaggaccacagccgagtcctttcc 542
||| || ||||||||||||| | |||||| || ||||||||||||| | ||||| |
Sbjct: 434 cgcaggcttgttctgcttctttgacttggttgtggagaggaccacagtcatctccttctc 375
Query: 543 agcagctggctggatcgttacagttttcttgtttgctaagccagagtacttgtaggagtg 602
|||||| ||||| | ||| ||||| ||||||||||| | |||||||||||||||||||||
Sbjct: 374 agcagcaggctgcaccgtcacagtcttcttgtttgccaggccagagtacttgtaggagtg 315
Query: 603 tacattgtagaggttgttgggctccttggtgaactgcaccttggcattgccgttgccaaa 662
||||||||||||||||||||||||||| ||||||| |||||||| |||| |||||| ||
Sbjct: 314 gacattgtagaggttgttgggctccttgctgaactgaaccttggcgttgctgttgccgaa 255
Query: 663 ctgcttcaccaggaaggagttgttcttcct 692
|||||| | ||||||| |||||||||||||
Sbjct: 254 ctgcttgatcaggaagcagttgttcttcct 225
>gb|AL505202.1|AL505202 AL505202 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW07L10V 5', mRNA sequence
Length = 681
Score = 353 bits (178), Expect = 6e-096
Identities = 337/390 (86%)
Strand = Plus / Minus
Query: 303 ctgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtacacagagct 362
||||||||||||||||||||||||||||||||||||||||||||||||||| || | |||
Sbjct: 495 ctgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtaaactgcgct 436
Query: 363 cagcctaccaagggccgacttggtcagatcaggcctgtaatagttgtcgccaacctggtt 422
||| || |||| || | |||||||| ||||||||||| |||||||| | ||||||||
Sbjct: 435 cagtcttgcaagagcaggcttggtcaagtcaggcctgtagtagttgtcactgacctggtt 376
Query: 423 tttcacagccttggccatcttgcggaactccttgcgcattacagacttgtggctgagctt 482
|| ||||||||||||||||||||||||||||||||||| |||| ||||||| |||
Sbjct: 375 cttgacagccttggccatcttgcggaactccttgcgcatgacagtcttgtgggtgaaggc 316
Query: 483 cgcgggtgtgttctgcttcttggtcttggtagtagagaggaccacagccgagtcctttcc 542
||| || ||||||||||||| | |||||| || ||||||||||||| | ||||| |
Sbjct: 315 cgcaggcttgttctgcttctttgacttggttgtggagaggaccacagtcatctccttctc 256
Query: 543 agcagctggctggatcgttacagttttcttgtttgctaagccagagtacttgtaggagtg 602
|||||| ||||| | ||| ||||| ||||||||||| | |||||||||||||||||||||
Sbjct: 255 agcagcaggctgcaccgtcacagtcttcttgtttgccaggccagagtacttgtaggagtg 196
Query: 603 tacattgtagaggttgttgggctccttggtgaactgcaccttggcattgccgttgccaaa 662
||||||||||||||||||||||||||| ||||||| |||||||| |||| |||||| ||
Sbjct: 195 gacattgtagaggttgttgggctccttgctgaactgaaccttggcgttgctgttgccgaa 136
Query: 663 ctgcttcaccaggaaggagttgttcttcct 692
|||||| | ||||||| |||||||||||||
Sbjct: 135 ctgcttgatcaggaagcagttgttcttcct 106
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 95,618
Number of Sequences: 312970
Number of extensions: 95618
Number of successful extensions: 26196
Number of sequences better than 0.5: 250
Number of HSP's better than 0.5 without gapping: 250
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 25550
Number of HSP's gapped (non-prelim): 524
length of query: 819
length of database: 175,134,539
effective HSP length: 19
effective length of query: 800
effective length of database: 169,188,109
effective search space: 135350487200
effective search space used: 135350487200
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)