BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.451
(1101 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BJ466705.1|BJ466705 BJ466705 K. Sato unpublished cDNA li... 702 0.0
gb|BJ466229.1|BJ466229 BJ466229 K. Sato unpublished cDNA li... 660 0.0
gb|BU986756.1|BU986756 HF12N01r HF Hordeum vulgare subsp. v... 652 0.0
gb|CK122114.1|CK122114 BES1824101h16 BES1824 Hordeum vulgar... 632 e-180
gb|BM376834.2|BM376834 EBem05_SQ003_F22_R embryo, 14 DPA, n... 609 e-173
gb|BU985302.1|BU985302 HF06L20r HF Hordeum vulgare subsp. v... 605 e-171
gb|CA009667.1|CA009667 HU14M12r HU Hordeum vulgare subsp. v... 605 e-171
gb|AV915415.1|AV915415 AV915415 K. Sato unpublished cDNA li... 595 e-168
gb|BJ465513.1|BJ465513 BJ465513 K. Sato unpublished cDNA li... 595 e-168
gb|CA015294.1|CA015294 HT13N23r HT Hordeum vulgare subsp. v... 595 e-168
gb|BM374906.1|BM374906 EBma05_SQ003_I02_R maternal, 12 DPA,... 567 e-160
gb|AV913840.1|AV913840 AV913840 K. Sato unpublished cDNA li... 567 e-160
gb|AL506220.1|AL506220 AL506220 Hordeum vulgare Barke devel... 565 e-159
gb|BQ768358.1|BQ768358 EBro08_SQ011_A15_R root, 3 week, dro... 559 e-158
gb|BQ466607.1|BQ466607 HS01B03T HS Hordeum vulgare subsp. v... 557 e-157
gb|BU997402.1|BU997402 HI07O02r HI Hordeum vulgare subsp. v... 553 e-156
gb|CA025165.1|CA025165 HZ51G09r HZ Hordeum vulgare subsp. v... 553 e-156
gb|CB858170.1|CB858170 HI06A17w HI Hordeum vulgare subsp. v... 551 e-155
gb|CA006977.1|CA006977 HU06E22r HU Hordeum vulgare subsp. v... 545 e-153
gb|CA009270.1|CA009270 HU13K15r HU Hordeum vulgare subsp. v... 545 e-153
gb|BQ464244.1|BQ464244 HF01L20T HF Hordeum vulgare subsp. v... 539 e-152
gb|BM377175.2|BM377175 EBem05_SQ004_F13_R embryo, 14 DPA, n... 539 e-152
gb|BU987888.1|BU987888 HF16A20r HF Hordeum vulgare subsp. v... 533 e-150
gb|BU990667.1|BU990667 HF25L12r HF Hordeum vulgare subsp. v... 531 e-149
gb|BU984897.1|BU984897 HF05G24r HF Hordeum vulgare subsp. v... 527 e-148
gb|AL508299.1|AL508299 AL508299 Hordeum vulgare Barke devel... 519 e-146
gb|BU999099.1|BU999099 HI13D24r HI Hordeum vulgare subsp. v... 515 e-145
gb|BU981060.1|BU981060 HA22I10r HA Hordeum vulgare subsp. v... 513 e-144
gb|BU982876.1|BU982876 HA27N24r HA Hordeum vulgare subsp. v... 513 e-144
gb|BJ549487.1|BJ549487 BJ549487 K. Sato unpublished cDNA li... 513 e-144
gb|CB882245.1|CB882245 HL01F05w HL Hordeum vulgare subsp. v... 513 e-144
gb|AL506899.1|AL506899 AL506899 Hordeum vulgare Barke devel... 509 e-143
gb|AV921455.1|AV921455 AV921455 K. Sato unpublished cDNA li... 509 e-143
gb|AL504978.1|AL504978 AL504978 Hordeum vulgare Barke roots... 507 e-142
gb|BI776540.2|BI776540 EBpi05_SQ001_N02_R pistil, 8 DPA, no... 507 e-142
gb|BF255203.3|BF255203 HVSMEf0006D18f Hordeum vulgare seedl... 505 e-142
gb|BQ471813.1|BQ471813 HV03I23r HV Hordeum vulgare subsp. v... 505 e-142
gb|BU972031.1|BU972031 HB20G09r BC Hordeum vulgare subsp. v... 502 e-140
gb|BF255205.3|BF255205 HVSMEf0006D20f Hordeum vulgare seedl... 500 e-140
gb|BM368086.2|BM368086 EBed01_SQ002_C05_R endosperm, 6 DPA,... 500 e-140
gb|BM369453.2|BM369453 EBem07_SQ003_K01_R embryo, 28 DPA, n... 500 e-140
gb|BG418623.2|BG418623 HVSMEk0023I20f Hordeum vulgare testa... 498 e-139
gb|BQ460157.1|BQ460157 HA07A21r HA Hordeum vulgare subsp. v... 498 e-139
gb|BQ464795.1|BQ464795 HU01I16T HU Hordeum vulgare subsp. v... 498 e-139
gb|BU983951.1|BU983951 HA31I16r HA Hordeum vulgare subsp. v... 498 e-139
gb|BQ460695.1|BQ460695 HA06D11r HA Hordeum vulgare subsp. v... 496 e-139
gb|BQ469079.1|BQ469079 HM03F03r HM Hordeum vulgare subsp. v... 496 e-139
gb|BQ768031.1|BQ768031 EBro08_SQ010_C14_R root, 3 week, dro... 496 e-139
gb|BU984025.1|BU984025 HA31M06r HA Hordeum vulgare subsp. v... 496 e-139
gb|CA025330.1|CA025330 HZ51N04r HZ Hordeum vulgare subsp. v... 496 e-139
gb|AL504977.1|AL504977 AL504977 Hordeum vulgare Barke roots... 494 e-138
gb|AV915205.1|AV915205 AV915205 K. Sato unpublished cDNA li... 494 e-138
gb|BE231229.1|BE231229 HVSMEg0017O22f Hordeum vulgare pre-a... 492 e-137
gb|BQ460773.1|BQ460773 HA05P21r HA Hordeum vulgare subsp. v... 492 e-137
gb|BQ464482.1|BQ464482 HF02G13r HF Hordeum vulgare subsp. v... 492 e-137
gb|BQ469234.1|BQ469234 HM03M18r HM Hordeum vulgare subsp. v... 492 e-137
gb|CA002955.1|CA002955 HS08P24r HS Hordeum vulgare subsp. v... 492 e-137
gb|BG343226.1|BG343226 HVSMEg0005C10f Hordeum vulgare pre-a... 490 e-137
gb|BU985440.1|BU985440 HF07D13r HF Hordeum vulgare subsp. v... 490 e-137
gb|BJ464213.1|BJ464213 BJ464213 K. Sato unpublished cDNA li... 488 e-136
gb|BU997435.1|BU997435 HI07P18r HI Hordeum vulgare subsp. v... 486 e-136
gb|CA007595.1|CA007595 HU08H03r HU Hordeum vulgare subsp. v... 486 e-136
gb|CK122586.1|CK122586 BES1824104h24 BES1824 Hordeum vulgar... 484 e-135
gb|BU982785.1|BU982785 HA27J17r HA Hordeum vulgare subsp. v... 482 e-134
gb|BU999131.1|BU999131 HI13G01r HI Hordeum vulgare subsp. v... 482 e-134
gb|BI947391.1|BI947391 HVSMEl0005F12f Hordeum vulgare spike... 480 e-134
gb|BU978583.1|BU978583 HA13K14r HA Hordeum vulgare subsp. v... 478 e-133
gb|BQ460010.1|BQ460010 HA07H12r HA Hordeum vulgare subsp. v... 474 e-132
gb|BG416860.2|BG416860 HVSMEk0014P02f Hordeum vulgare testa... 472 e-131
gb|BJ466786.1|BJ466786 BJ466786 K. Sato unpublished cDNA li... 472 e-131
gb|BI958627.1|BI958627 HVSMEn0015P21f Hordeum vulgare rachi... 468 e-130
gb|AV921241.1|AV921241 AV921241 K. Sato unpublished cDNA li... 468 e-130
gb|BJ467720.1|BJ467720 BJ467720 K. Sato unpublished cDNA li... 466 e-130
gb|BQ767400.1|BQ767400 EBro08_SQ008_F19_R root, 3 week, dro... 466 e-130
gb|BQ464016.1|BQ464016 HF01B21T HF Hordeum vulgare subsp. v... 464 e-129
gb|BI778657.2|BI778657 EBro07_SQ003_O23_R root, 3 week, red... 464 e-129
gb|BM368795.2|BM368795 EBem08_SQ004_J24_R embryo, 40 DPA, n... 460 e-128
gb|BE216629.2|BE216629 HV_CEb0011A04f Hordeum vulgare seedl... 456 e-127
gb|BM374943.1|BM374943 EBma05_SQ003_L11_R maternal, 12 DPA,... 456 e-127
gb|BU978028.1|BU978028 HA12H07r HA Hordeum vulgare subsp. v... 456 e-127
gb|BU996996.1|BU996996 HI06I24r HI Hordeum vulgare subsp. v... 456 e-127
gb|AV920322.1|AV920322 AV920322 K. Sato unpublished cDNA li... 452 e-125
gb|BQ659625.1|BQ659625 HF01B21w HF Hordeum vulgare subsp. v... 452 e-125
gb|BM441014.2|BM441014 EBed02_SQ002_C20_R endosperm, 8 DPA,... 450 e-125
gb|AL509008.1|AL509008 AL509008 Hordeum vulgare Barke devel... 448 e-124
gb|BQ460711.1|BQ460711 HA06C09r HA Hordeum vulgare subsp. v... 448 e-124
gb|CA007739.1|CA007739 HU08N22r HU Hordeum vulgare subsp. v... 448 e-124
gb|BQ659794.1|BQ659794 HF01L20w HF Hordeum vulgare subsp. v... 446 e-124
gb|BQ663231.1|BQ663231 HU01I16w HU Hordeum vulgare subsp. v... 444 e-123
gb|BQ469728.1|BQ469728 HZ01L03r HZ Hordeum vulgare subsp. v... 442 e-122
gb|AV916123.1|AV916123 AV916123 K. Sato unpublished cDNA li... 438 e-121
gb|BQ469508.1|BQ469508 HZ01A09r HZ Hordeum vulgare subsp. v... 436 e-121
gb|CA007564.1|CA007564 HU08F15r HU Hordeum vulgare subsp. v... 436 e-121
gb|BQ660276.1|BQ660276 HI01M03w HI Hordeum vulgare subsp. v... 434 e-120
gb|BM375845.2|BM375845 EBem06_SQ004_J06_R embryo, 21 DPA, n... 434 e-120
gb|CV056625.1|CV056625 BNEL19H10 Barley EST endosperm libra... 430 e-119
gb|BU982422.1|BU982422 HA26I04r HA Hordeum vulgare subsp. v... 426 e-118
gb|BU982654.1|BU982654 HA27D10r HA Hordeum vulgare subsp. v... 426 e-118
gb|CA007244.1|CA007244 HU07E09r HU Hordeum vulgare subsp. v... 426 e-118
gb|CA009251.1|CA009251 HU13J18r HU Hordeum vulgare subsp. v... 426 e-118
gb|AV919478.1|AV919478 AV919478 K. Sato unpublished cDNA li... 424 e-117
gb|BU966797.1|BU966797 HB02G09r BC Hordeum vulgare subsp. v... 424 e-117
gb|CA001686.1|CA001686 HS05E16r HS Hordeum vulgare subsp. v... 424 e-117
gb|BM370371.2|BM370371 EBro08_SQ004_A07_R root, 3 week, dro... 420 e-116
gb|BU974680.1|BU974680 HB28L24r BC Hordeum vulgare subsp. v... 420 e-116
gb|CA003575.1|CA003575 HS14O12r HS Hordeum vulgare subsp. v... 420 e-116
gb|CA027940.1|CA027940 HZ60I02r HZ Hordeum vulgare subsp. v... 420 e-116
gb|BF623750.1|BF623750 HVSMEa0005I03f Hordeum vulgare seedl... 418 e-115
gb|BI955191.1|BI955191 HVSMEm0021M22f Hordeum vulgare green... 402 e-111
gb|BG344757.2|BG344757 HVSMEg0015O01f Hordeum vulgare pre-a... 402 e-111
gb|BU994252.1|BU994252 HM06G05r HM Hordeum vulgare subsp. v... 402 e-111
gb|BJ550143.1|BJ550143 BJ550143 K. Sato unpublished cDNA li... 394 e-108
gb|BQ462705.1|BQ462705 HI01M03T HI Hordeum vulgare subsp. v... 389 e-106
gb|BF624292.3|BF624292 HVSMEa0013I13f Hordeum vulgare seedl... 383 e-105
gb|BU982248.1|BU982248 HA25P08r HA Hordeum vulgare subsp. v... 377 e-103
gb|BM375772.2|BM375772 EBem06_SQ004_F23_R embryo, 21 DPA, n... 375 e-102
gb|AL511526.1|AL511526 AL511526 Hordeum vulgare Barke devel... 373 e-102
gb|AV920503.1|AV920503 AV920503 K. Sato unpublished cDNA li... 371 e-101
gb|BJ466674.1|BJ466674 BJ466674 K. Sato unpublished cDNA li... 363 8e-099
gb|CA002819.1|CA002819 HS08J23r HS Hordeum vulgare subsp. v... 363 8e-099
gb|CA002913.1|CA002913 HS08O04r HS Hordeum vulgare subsp. v... 363 8e-099
gb|CA023283.1|CA023283 HZ45M06r HZ Hordeum vulgare subsp. v... 363 8e-099
gb|BQ469232.1|BQ469232 HM03M16r HM Hordeum vulgare subsp. v... 359 1e-097
gb|BU975082.1|BU975082 HB30A16r BC Hordeum vulgare subsp. v... 357 5e-097
gb|AL507243.1|AL507243 AL507243 Hordeum vulgare Barke devel... 355 2e-096
gb|AL509303.1|AL509303 AL509303 Hordeum vulgare Barke devel... 349 1e-094
gb|BQ465114.1|BQ465114 HU02L05r HU Hordeum vulgare subsp. v... 343 8e-093
gb|AL509636.1|AL509636 AL509636 Hordeum vulgare Barke devel... 341 3e-092
gb|BQ664489.1|BQ664489 HV03I23u HV Hordeum vulgare subsp. v... 341 3e-092
gb|BU999840.1|BU999840 HS17D12u HS Hordeum vulgare subsp. v... 341 3e-092
gb|CA000430.1|CA000430 HS08J23u HS Hordeum vulgare subsp. v... 341 3e-092
gb|CA001468.1|CA001468 HS17H16u HS Hordeum vulgare subsp. v... 341 3e-092
gb|CB858311.1|CB858311 HI06I24w HI Hordeum vulgare subsp. v... 341 3e-092
gb|CA000336.1|CA000336 HS08O04u HS Hordeum vulgare subsp. v... 335 2e-090
gb|BU996859.1|BU996859 HI06A17r HI Hordeum vulgare subsp. v... 333 7e-090
gb|BU979322.1|BU979322 HA15M16r HA Hordeum vulgare subsp. v... 331 3e-089
gb|CA016110.1|CA016110 HV10I11u HV Hordeum vulgare subsp. v... 331 3e-089
gb|AJ462937.1|AJ462937 AJ462937 S00002 Hordeum vulgare subs... 329 1e-088
gb|BE060760.1|BE060760 HVSMEg0013E07f Hordeum vulgare pre-a... 327 4e-088
gb|BE214611.3|BE214611 HV_CEb0003P12f Hordeum vulgare seedl... 325 2e-087
gb|AV919758.1|AV919758 AV919758 K. Sato unpublished cDNA li... 325 2e-087
gb|AJ462936.1|AJ462936 AJ462936 S00002 Hordeum vulgare subs... 325 2e-087
gb|BQ657422.1|BQ657422 HA08H01u HA Hordeum vulgare subsp. v... 325 2e-087
gb|BQ459663.1|BQ459663 HA08H01r HA Hordeum vulgare subsp. v... 321 3e-086
gb|CK125038.1|CK125038 BES1824111B1c07 BES1824 Hordeum vulg... 321 3e-086
gb|CA001158.1|CA001158 HS05E16u HS Hordeum vulgare subsp. v... 317 4e-085
gb|CA002828.1|CA002828 HS08K08r HS Hordeum vulgare subsp. v... 317 4e-085
gb|BQ658025.1|BQ658025 HA05P21u HA Hordeum vulgare subsp. v... 311 3e-083
gb|CV057394.1|CV057394 BNEL27c9 Barley EST endosperm librar... 311 3e-083
gb|BE437866.1|BE437866 SFR008.D01F990628 ITEC SFR Barley Le... 309 1e-082
gb|BM100527.1|BM100527 EBma01_SQ005_H18_R maternal, 4 DPA, ... 309 1e-082
gb|BM098673.2|BM098673 EBem08_SQ003_M01_R embryo, 40 DPA, n... 309 1e-082
gb|CA030404.1|CA030404 HX06P09r HX Hordeum vulgare subsp. v... 309 1e-082
gb|CB874995.1|CB874995 HX06P09w HX Hordeum vulgare subsp. v... 309 1e-082
gb|CA005868.1|CA005868 HU08H03u HU Hordeum vulgare subsp. v... 307 4e-082
gb|BJ469460.1|BJ469460 BJ469460 K. Sato unpublished cDNA li... 305 2e-081
gb|CA000325.1|CA000325 HS08K19u HS Hordeum vulgare subsp. v... 303 6e-081
gb|AJ461787.1|AJ461787 AJ461787 S00002 Hordeum vulgare subs... 301 3e-080
gb|BU982567.1|BU982567 HA26P01r HA Hordeum vulgare subsp. v... 301 3e-080
gb|BQ470544.1|BQ470544 HX03E21r HX Hordeum vulgare subsp. v... 299 1e-079
gb|AJ461785.1|AJ461785 AJ461785 S00002 Hordeum vulgare subs... 297 4e-079
gb|AJ462934.1|AJ462934 AJ462934 S00002 Hordeum vulgare subs... 297 4e-079
gb|BJ464154.1|BJ464154 BJ464154 K. Sato unpublished cDNA li... 295 2e-078
gb|BJ466369.1|BJ466369 BJ466369 K. Sato unpublished cDNA li... 295 2e-078
gb|BJ466634.1|BJ466634 BJ466634 K. Sato unpublished cDNA li... 295 2e-078
gb|AV913226.1|AV913226 AV913226 K. Sato unpublished cDNA li... 293 6e-078
gb|BI779730.2|BI779730 EBem05_SQ001_F15_R embryo, 14 DPA, n... 291 2e-077
gb|BU979300.1|BU979300 HA15L14r HA Hordeum vulgare subsp. v... 281 2e-074
gb|CA002838.1|CA002838 HS08K19r HS Hordeum vulgare subsp. v... 281 2e-074
gb|CA019090.1|CA019090 HV10M01r HV Hordeum vulgare subsp. v... 281 2e-074
gb|BQ468500.1|BQ468500 HM01H01T HM Hordeum vulgare subsp. v... 278 4e-073
gb|BQ665266.1|BQ665266 HX02N01u HX Hordeum vulgare subsp. v... 278 4e-073
gb|AL502260.1|AL502260 AL502260 Hordeum vulgare Barke roots... 276 1e-072
gb|BQ657991.1|BQ657991 HA06C09u HA Hordeum vulgare subsp. v... 276 1e-072
gb|CB858688.1|CB858688 HI07P18w HI Hordeum vulgare subsp. v... 274 6e-072
gb|BQ755375.1|BQ755375 EBed07_SQ002_N12_R endosperm, 28 DPA... 270 9e-071
gb|CV062237.1|CV062237 BNEL77g8 Barley EST endosperm librar... 270 9e-071
gb|BM375825.2|BM375825 EBem06_SQ004_I09_R embryo, 21 DPA, n... 268 4e-070
gb|AL510321.1|AL510321 AL510321 Hordeum vulgare Barke devel... 266 1e-069
gb|CA002587.1|CA002587 HS07P09r HS Hordeum vulgare subsp. v... 266 1e-069
gb|CA004294.1|CA004294 HS17C18r HS Hordeum vulgare subsp. v... 266 1e-069
gb|CA021896.1|CA021896 HZ41H15r HZ Hordeum vulgare subsp. v... 266 1e-069
gb|AL511828.1|AL511828 AL511828 Hordeum vulgare Barke devel... 264 6e-069
gb|BJ464091.1|BJ464091 BJ464091 K. Sato unpublished cDNA li... 264 6e-069
gb|AJ462855.1|AJ462855 AJ462855 S00002 Hordeum vulgare subs... 258 3e-067
gb|BU997469.1|BU997469 HI08B10r HI Hordeum vulgare subsp. v... 258 3e-067
gb|CB858713.1|CB858713 HI08B10w HI Hordeum vulgare subsp. v... 258 3e-067
gb|AL502259.1|AL502259 AL502259 Hordeum vulgare Barke roots... 256 1e-066
gb|BQ665955.1|BQ665955 HZ01L03u HZ Hordeum vulgare subsp. v... 252 2e-065
gb|AJ462935.1|AJ462935 AJ462935 S00002 Hordeum vulgare subs... 250 8e-065
gb|BJ465789.1|BJ465789 BJ465789 K. Sato unpublished cDNA li... 250 8e-065
gb|CA016067.1|CA016067 HV10G08u HV Hordeum vulgare subsp. v... 250 8e-065
gb|CA017340.1|CA017340 HV12O01u HV Hordeum vulgare subsp. v... 250 8e-065
gb|AV914437.1|AV914437 AV914437 K. Sato unpublished cDNA li... 246 1e-063
gb|BU967376.1|BU967376 HB04B23r BC Hordeum vulgare subsp. v... 246 1e-063
gb|BU980185.1|BU980185 HA18O21r HA Hordeum vulgare subsp. v... 246 1e-063
gb|AV915919.1|AV915919 AV915919 K. Sato unpublished cDNA li... 244 5e-063
gb|BU990109.1|BU990109 HF24B23r HF Hordeum vulgare subsp. v... 244 5e-063
gb|AV921038.1|AV921038 AV921038 K. Sato unpublished cDNA li... 242 2e-062
gb|BQ662931.1|BQ662931 HS04N07u HS Hordeum vulgare subsp. v... 240 8e-062
gb|BJ463963.1|BJ463963 BJ463963 K. Sato unpublished cDNA li... 238 3e-061
gb|CA004310.1|CA004310 HS17D12r HS Hordeum vulgare subsp. v... 238 3e-061
gb|BQ664959.1|BQ664959 HX01J01w HX Hordeum vulgare subsp. v... 234 5e-060
gb|AJ461786.1|AJ461786 AJ461786 S00002 Hordeum vulgare subs... 222 2e-056
gb|AL500031.1|AL500031 AL500031 Hordeum vulgare Barke etiol... 214 5e-054
gb|CA000436.1|CA000436 HS08K08u HS Hordeum vulgare subsp. v... 214 5e-054
gb|CA002654.1|CA002654 HS08C09r HS Hordeum vulgare subsp. v... 212 2e-053
gb|BM101430.2|BM101430 EBpi01_SQ003_N05_R pistil, 1 DPA, no... 210 7e-053
gb|BM098323.2|BM098323 EBem08_SQ002_F15_R embryo, 40 DPA, n... 204 4e-051
gb|CA026132.1|CA026132 HZ55B04r HZ Hordeum vulgare subsp. v... 202 2e-050
gb|BF259174.2|BF259174 HVSMEf0017P17f Hordeum vulgare seedl... 196 1e-048
gb|BQ470030.1|BQ470030 HX01J01T HX Hordeum vulgare subsp. v... 194 4e-048
gb|CA028799.1|CA028799 HZ63E15r HZ Hordeum vulgare subsp. v... 194 4e-048
gb|BI947401.1|BI947401 HVSMEl0005F22f Hordeum vulgare spike... 192 2e-047
gb|BQ466943.1|BQ466943 HS02B03r HS Hordeum vulgare subsp. v... 192 2e-047
gb|BG367821.2|BG367821 HVSMEi0013N07f Hordeum vulgare 20 DA... 186 1e-045
gb|CA024343.1|CA024343 HZ49A19r HZ Hordeum vulgare subsp. v... 184 4e-045
gb|BJ474882.1|BJ474882 BJ474882 K. Sato unpublished cDNA li... 180 6e-044
gb|AL512117.1|AL512117 AL512117 Hordeum vulgare Barke devel... 178 3e-043
gb|CA025732.1|CA025732 HZ52P20r HZ Hordeum vulgare subsp. v... 178 3e-043
gb|BU983158.1|BU983158 HA28L20r HA Hordeum vulgare subsp. v... 176 1e-042
gb|CA004400.1|CA004400 HS17H16r HS Hordeum vulgare subsp. v... 174 4e-042
gb|BF622669.2|BF622669 HVSMEa0007L06f Hordeum vulgare seedl... 167 1e-039
gb|BQ472111.1|BQ472111 HV04H03r HV Hordeum vulgare subsp. v... 167 1e-039
gb|BQ758514.1|BQ758514 EBma07_SQ001_P22 _R maternal, 21 DPA... 167 1e-039
gb|BU996649.1|BU996649 HM14E15r HM Hordeum vulgare subsp. v... 167 1e-039
gb|CA029079.1|CA029079 HZ64C08r HZ Hordeum vulgare subsp. v... 167 1e-039
gb|BQ755051.1|BQ755051 EBed02_SQ003_J06_R endosperm, 8 DPA,... 155 4e-036
gb|AJ433589.1|AJ433589 AJ433589 S00002 Hordeum vulgare subs... 149 2e-034
gb|BM377013.1|BM377013 EBem05_SQ003_N22_R embryo, 14 DPA, n... 147 9e-034
gb|BQ661396.1|BQ661396 HM03F03u HM Hordeum vulgare subsp. v... 127 8e-028
gb|BJ544094.1|BJ544094 BJ544094 K. Sato unpublished cDNA li... 125 3e-027
gb|BQ761779.1|BQ761779 EBem10_SQ001_H20_R embryo, 2 Day ger... 123 1e-026
gb|BJ545609.1|BJ545609 BJ545609 K. Sato unpublished cDNA li... 123 1e-026
gb|BF256211.2|BF256211 HVSMEf0009B23f Hordeum vulgare seedl... 119 2e-025
gb|CB858664.1|CB858664 HI07O02w HI Hordeum vulgare subsp. v... 113 1e-023
gb|CA006468.1|CA006468 HU13K15u HU Hordeum vulgare subsp. v... 111 5e-023
gb|AJ433387.1|AJ433387 AJ433387 S00002 Hordeum vulgare subs... 107 8e-022
gb|BQ470589.1|BQ470589 HX03G22r HX Hordeum vulgare subsp. v... 105 3e-021
gb|CA023906.1|CA023906 HZ47M11r HZ Hordeum vulgare subsp. v... 101 5e-020
gb|BU979712.1|BU979712 HA17A10r HA Hordeum vulgare subsp. v... 100 2e-019
gb|AV918450.1|AV918450 AV918450 K. Sato unpublished cDNA li... 90 2e-016
gb|BM443788.1|BM443788 EBem09_SQ001_I08_R embryo, 1 Day ger... 88 7e-016
gb|BF628787.3|BF628787 HVSMEb0008D14f Hordeum vulgare seedl... 86 3e-015
gb|BM441550.1|BM441550 EBma05_SQ004_M12_R maternal, 12 DPA,... 84 1e-014
gb|AJ433395.1|AJ433395 AJ433395 S00002 Hordeum vulgare subs... 84 1e-014
gb|BM101252.1|BM101252 EBpi01_SQ003_F07_R pistil, 1 DPA, no... 82 4e-014
gb|AV919331.1|AV919331 AV919331 K. Sato unpublished cDNA li... 74 1e-011
gb|BU980689.1|BU980689 HA21G11r HA Hordeum vulgare subsp. v... 66 3e-009
gb|BI777774.2|BI777774 EBro08_SQ002_A06_R root, 3 week, dro... 58 6e-007
gb|BI948254.1|BI948254 HVSMEl0009C22f Hordeum vulgare spike... 54 1e-005
gb|BQ756776.1|BQ756776 EBem09_SQ003_L14_R embryo, 1 Day ger... 52 4e-005
gb|CA006312.1|CA006312 HU14J05u HU Hordeum vulgare subsp. v... 52 4e-005
gb|BI952621.1|BI952621 HVSMEm0007C21f Hordeum vulgare green... 50 2e-004
gb|BI952623.1|BI952623 HVSMEm0007C23f Hordeum vulgare green... 50 2e-004
gb|BI954103.1|BI954103 HVSMEm0016D10f Hordeum vulgare green... 50 2e-004
gb|BE602325.2|BE602325 HVSMEh0098H22f Hordeum vulgare 5-45 ... 48 6e-004
gb|BQ466425.1|BQ466425 HT02H24r HT Hordeum vulgare subsp. v... 46 0.002
gb|BI777649.2|BI777649 EBro08_SQ001_D02_R root, 3 week, dro... 42 0.038
>gb|BJ466705.1|BJ466705 BJ466705 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags33i18 3', mRNA sequence
Length = 753
Score = 702 bits (354), Expect = 0.0
Identities = 623/712 (87%), Gaps = 3/712 (0%)
Strand = Plus / Minus
Query: 146 atcgatgacgaccagaagctgcgtgccttttatgaccgaaggatatcccaggaggtcagt 205
||||||||||||||||||||||| | |||||||| || || ||||||||||| |
Sbjct: 747 atcgatgacgaccagaagctgcggaacctttatgacaagagaatctcccaggaggtagtt 688
Query: 206 ggtgatgctctgggtgaggagttcaagggttatgtcttcaagatcatgggtggatgtgac 265
|||||| |||||||||||| |||||||||||| ||||||||||||||||||| |||||
Sbjct: 687 ggtgatcttctgggtgaggaattcaagggttatatcttcaagatcatgggtggctgtgat 628
Query: 266 aagcaaggcttcccaatgaagcaaggagttttgacttctggtcgtgttcgtcttctgctc 325
||||| ||||||||||||||||||||||| | |||||||| ||||| || ||||||||
Sbjct: 627 aagcagggcttcccaatgaagcaaggagtgctaacttctgggcgtgtccgccttctgctt 568
Query: 326 cataggggcactccctgcttccgtggttatggcaggcgtaatggtgagcgcaggaggaag 385
|| |||||||| || ||||||||||||| ||||||||||||||||||||||||||| |||
Sbjct: 567 cacaggggcacaccttgcttccgtggttttggcaggcgtaatggtgagcgcaggagaaag 508
Query: 386 tctgtccgtggttgcatcgtgagccaagacctatctgttatcaacttggtgattgtgaag 445
|| |||||||||||||| || ||||||||||| ||||||||||||||||||||||| |||
Sbjct: 507 tccgtccgtggttgcattgtcagccaagacctgtctgttatcaacttggtgattgtcaag 448
Query: 446 aagggtgagaatgatctgcctggtctgactgacactgagaagccaaggatgaggggtccc 505
|||||||||||||||||||| || || ||||||||||||||||| ||||||||||| |||
Sbjct: 447 aagggtgagaatgatctgccaggccttactgacactgagaagcccaggatgaggggaccc 388
Query: 506 aagagggcctccaagatcagaaagctgttcaaccttaacaaggatgatgatgtacgcaag 565
|||||||| |||||||||| ||||| ||||||||| ||||||||||||||| ||||
Sbjct: 387 aagagggcttccaagatcaagaagctcttcaaccttggcaaggatgatgatgtccgcagc 328
Query: 566 tacgtgaacacataccgcaggacattcactaccaagaacggcaagaaggtcagcaaggca 625
|| || ||||||||||||||||| ||| || |||||| ||||||||||| ||||||||
Sbjct: 327 tatgtcaacacataccgcaggaccttccttaacaagaagggcaagaaggtgagcaaggct 268
Query: 626 cctaagatccaacggcttgtgacacccttgaccctccagaggaagcgtgctagaatcgct 685
|| |||||||| || |||||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 267 cccaagatccagcgtcttgtgactcccttgaccctccagaggaagcgtgccagaatcgcc 208
Query: 686 gacaagaagaagaggataactaagaagaagtctgaggctgctgagtaccagaagcttctt 745
||||||||||||||||| | ||||||||||| |||||||| |||||||||||||| |||
Sbjct: 207 gacaagaagaagaggatcgccaagaagaagtcagaggctgcagagtaccagaagctgctt 148
Query: 746 gcccagaggctgaaggaacagagggaccgccggagcgagagcttggccaagaggaggtcc 805
|| || ||||||||||| ||||| |||||||| || |||||| ||||||||||||||||
Sbjct: 147 gcgcaaaggctgaaggagcagagagaccgccgcagtgagagcatggccaagaggaggtca 88
Query: 806 aagctttctgccgccgccaaggcttctgctgccacctctgcttaagaatgtt 857
||||| ||||| || | |||||| |||||| ||||||||||||| ||||
Sbjct: 87 aagctgtctgctgctacaaaggctcctgctg---cctctgcttaagattgtt 39
>gb|BJ466229.1|BJ466229 BJ466229 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags31e04 3', mRNA sequence
Length = 681
Score = 660 bits (333), Expect = 0.0
Identities = 557/631 (88%), Gaps = 3/631 (0%)
Strand = Plus / Minus
Query: 227 ttcaagggttatgtcttcaagatcatgggtggatgtgacaagcaaggcttcccaatgaag 286
|||||||||||| ||||||||||||||||||| ||||| ||||| |||||||||||||||
Sbjct: 678 ttcaagggttatatcttcaagatcatgggtggctgtgataagcagggcttcccaatgaag 619
Query: 287 caaggagttttgacttctggtcgtgttcgtcttctgctccataggggcactccctgcttc 346
|||||||| | |||||||| ||||| || |||||||| || |||||||| || ||||||
Sbjct: 618 caaggagtgctaacttctgggcgtgtccgccttctgcttcacaggggcacaccttgcttc 559
Query: 347 cgtggttatggcaggcgtaatggtgagcgcaggaggaagtctgtccgtggttgcatcgtg 406
||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||| ||
Sbjct: 558 cgtggttttggcaggcgtaatggtgagcgcaggagaaagtccgtccgtggttgcattgtc 499
Query: 407 agccaagacctatctgttatcaacttggtgattgtgaagaagggtgagaatgatctgcct 466
||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 498 agccaagacctgtctgttatcaacttggtgattgtcaagaagggtgagaatgatctgcca 439
Query: 467 ggtctgactgacactgagaagccaaggatgaggggtcccaagagggcctccaagatcaga 526
|| || ||||||||||||||||| ||||||||||| ||||||||||| ||||||||||
Sbjct: 438 ggccttactgacactgagaagcccaggatgaggggacccaagagggcttccaagatcaag 379
Query: 527 aagctgttcaaccttaacaaggatgatgatgtacgcaagtacgtgaacacataccgcagg 586
||||| ||||||||| ||||||||||||||| |||| || || |||||||||||||||
Sbjct: 378 aagctcttcaaccttggcaaggatgatgatgtccgcagctatgtcaacacataccgcagg 319
Query: 587 acattcactaccaagaacggcaagaaggtcagcaaggcacctaagatccaacggcttgtg 646
|| ||| || |||||| ||||||||||| |||||||| || |||||||| || ||||||
Sbjct: 318 accttccttaacaagaagggcaagaaggtgagcaaggctcccaagatccagcgtcttgtg 259
Query: 647 acacccttgaccctccagaggaagcgtgctagaatcgctgacaagaagaagaggataact 706
|| |||||||||||||||||||||||||| |||||||| ||||||||||||||||| |
Sbjct: 258 actcccttgaccctccagaggaagcgtgccagaatcgccgacaagaagaagaggatcgcc 199
Query: 707 aagaagaagtctgaggctgctgagtaccagaagcttcttgcccagaggctgaaggaacag 766
||||||||||| |||||||| |||||||||||||| ||||| || ||||||||||| |||
Sbjct: 198 aagaagaagtcagaggctgcagagtaccagaagctgcttgcgcaaaggctgaaggagcag 139
Query: 767 agggaccgccggagcgagagcttggccaagaggaggtccaagctttctgccgccgccaag 826
|| |||||||| || |||||| |||||||||||||||| ||||| ||||| || | |||
Sbjct: 138 agagaccgccgcagtgagagcatggccaagaggaggtcaaagctgtctgctgctacaaag 79
Query: 827 gcttctgctgccacctctgcttaagaatgtt 857
||| |||||| ||||||||||||| ||||
Sbjct: 78 gctcctgctg---cctctgcttaagattgtt 51
>gb|BU986756.1|BU986756 HF12N01r HF Hordeum vulgare subsp. vulgare cDNA clone HF12N01
5-PRIME, mRNA sequence
Length = 659
Score = 652 bits (329), Expect = 0.0
Identities = 569/649 (87%)
Strand = Plus / Plus
Query: 83 cgcaacgccaccatgaagttcaacatcgcgaacccttccaccgggtgccaaaagaagctg 142
|||||| ||||||||||| | |||||||||||||| |||| |||||||| |||||| |
Sbjct: 11 cgcaactccaccatgaagctgaacatcgcgaaccccaccacggggtgccagaagaaggtc 70
Query: 143 gaaatcgatgacgaccagaagctgcgtgccttttatgaccgaaggatatcccaggaggtc 202
|| ||||||||||||||||||||||| | |||||||| || || |||||||||||
Sbjct: 71 gagatcgatgacgaccagaagctgcggaacctttatgacaagagaatctcccaggaggta 130
Query: 203 agtggtgatgctctgggtgaggagttcaagggttatgtcttcaagatcatgggtggatgt 262
||||||| |||||||||||| |||||||||||| ||||||||||||||||||| |||
Sbjct: 131 gttggtgatcttctgggtgaggaattcaagggttatatcttcaagatcatgggtggctgt 190
Query: 263 gacaagcaaggcttcccaatgaagcaaggagttttgacttctggtcgtgttcgtcttctg 322
|| ||||| |||||||| |||||||||||||| | |||||||| ||||| || ||||||
Sbjct: 191 gataagcagggcttcccgatgaagcaaggagtgctaacttctgggcgtgtccgccttctg 250
Query: 323 ctccataggggcactccctgcttccgtggttatggcaggcgtaatggtgagcgcaggagg 382
|| || |||||||| || ||||||||||||| |||||||||||||||||||||||||||
Sbjct: 251 cttcacaggggcacaccttgcttccgtggttttggcaggcgtaatggtgagcgcaggaga 310
Query: 383 aagtctgtccgtggttgcatcgtgagccaagacctatctgttatcaacttggtgattgtg 442
||||| |||||||||||||| || ||||||||||| |||||||||||||||||||||||
Sbjct: 311 aagtccgtccgtggttgcattgtcagccaagacctgtctgttatcaacttggtgattgtc 370
Query: 443 aagaagggtgagaatgatctgcctggtctgactgacactgagaagccaaggatgaggggt 502
||||||||||||||||||||||| || || ||||||||||||||||| |||||||||||
Sbjct: 371 aagaagggtgagaatgatctgccaggccttactgacactgagaagcccaggatgagggga 430
Query: 503 cccaagagggcctccaagatcagaaagctgttcaaccttaacaaggatgatgatgtacgc 562
||||||||||| |||||||||| ||||| ||||||||| ||||||||||||||| |||
Sbjct: 431 cccaagagggcttccaagatcaagaagctcttcaaccttggcaaggatgatgatgtccgc 490
Query: 563 aagtacgtgaacacataccgcaggacattcactaccaagaacggcaagaaggtcagcaag 622
| || || ||||||||||||||||| ||| || |||||| ||||||||||| ||||||
Sbjct: 491 agctatgtcaacacataccgcaggaccttccttaacaagaagggcaagaaggtgagcaag 550
Query: 623 gcacctaagatccaacggcttgtgacacccttgaccctccagaggaagcgtgctagaatc 682
|| || |||||||| || |||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 551 gctcccaagatccagcgtcttgtgactcccttgaccctccagaggaagcgtgccagaatc 610
Query: 683 gctgacaagaagaagaggataactaagaagaagtctgaggctgctgagt 731
|||||||||||||||||||| | ||||||||||| |||||||| ||||
Sbjct: 611 gctgacaagaagaagaggatcgccaagaagaagtcagaggctgcagagt 659
>gb|CK122114.1|CK122114 BES1824101h16 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010H161 5-PRIME, mRNA sequence
Length = 758
Score = 632 bits (319), Expect = e-180
Identities = 622/719 (86%), Gaps = 3/719 (0%)
Strand = Plus / Plus
Query: 42 ccacccagcgctcgagctcctcgctccctgcgagcgcgcgccgcaacgccaccatgaagt 101
|||||||||| ||| | | ||||| || |||||| || |||||||| |||||||||||
Sbjct: 42 ccacccagcgttcgggttgctcgccgccggcgagctcgtgccgcaactccaccatgaagc 101
Query: 102 tcaacatcgcgaacccttccaccgggtgccaaaagaagctggaaatcgatgacgaccaga 161
| |||||||||||||| |||| |||||||| |||||| | || ||||||||||||||||
Sbjct: 102 tgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgacgaccaga 161
Query: 162 agctgcgtgccttttatgaccgaaggatatcccaggaggtcagtggtgatgctctgggtg 221
||||||| | |||||||| || || ||||||||||| ||||||| ||||||||
Sbjct: 162 agctgcggaacctttatgacaagagaatctcccaggaggtagttggtgatcttctgggtg 221
Query: 222 aggagttcaagggttatgtcttcaagatcatgggtggatgtgacaagcaaggcttcccaa 281
|||| |||||||||||| ||||||||||||||||||| ||||| ||||| |||||||| |
Sbjct: 222 aggaattcaagggttatatcttcaagatcatgggtggctgtgataagcagggcttcccga 281
Query: 282 tgaagcaaggagttttgacttctggtcgtgttcgtcttctgctccataggggcactccct 341
||||||||||||| | |||||||| ||||| || |||||||| || |||||||| || |
Sbjct: 282 tgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacaggggcacacctt 341
Query: 342 gcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtctgtccgtggttgca 401
|||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 342 gcttccgtggttttggcaggcgtaatggtgagcgcaggagaaagtccgtccgtggttgca 401
Query: 402 tcgtgagccaagacctatctgttatcaacttggtgattgtgaagaagggtgagaatgatc 461
| || ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 402 ttgtcagccaagacctgtctgttatcaacttggtgattgtcaagaagggtgagaatgatc 461
Query: 462 tgcctggtctgactgacactgagaagccaaggatgaggggtcccaagagggcctccaaga 521
|||| || || ||||||||||||||||| ||||||||||| ||||||||||| |||||||
Sbjct: 462 tgccaggccttactgacactgagaagcccaggatgaggggacccaagagggcttccaaga 521
Query: 522 tcagaaagctgttcaaccttaacaaggatgatgatgtacgcaagtacgtgaacacatacc 581
||| ||||| ||||||||| ||||||||||||||| |||| || || ||||||||||
Sbjct: 522 tcaagaagctcttcaaccttggcaaggatgatgatgtccgcagctatgtcaacacatacc 581
Query: 582 gcaggacatt-cactaccaagaacggcaagaaggtcagcaaggcacctaagatccaacgg 640
||||||| || | || |||||| ||||||||||| |||||||| || |||||||| ||
Sbjct: 582 gcaggaccttcctttaacaagaagggcaagaaggtgagcaaggctcccaagatccagcgt 641
Query: 641 cttgtgacacccttgaccctccagaggaagcgtgctagaatcgctgacaagaagaagagg 700
|||||||| ||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 642 cttgtgac-tccttgaccctccagaggaagcgtgccagaatcgctgacaaaaagaagagg 700
Query: 701 ataactaagaagaagtctgaggctgctgagtaccagaagcttcttgcccagaggctgaa 759
|| | || || ||||| |||||||| |||||||||||||| ||||| || ||||||||
Sbjct: 701 atcgccaa-aaaaagtcagaggctgcagagtaccagaagctgcttgcgcaaaggctgaa 758
>gb|BM376834.2|BM376834 EBem05_SQ003_F22_R embryo, 14 DPA, no treatment, cv Optic, EBem05
Hordeum vulgare subsp. vulgare cDNA clone
EBem05_SQ003_F22 5', mRNA sequence
Length = 568
Score = 609 bits (307), Expect = e-173
Identities = 502/567 (88%)
Strand = Plus / Plus
Query: 191 tcccaggaggtcagtggtgatgctctgggtgaggagttcaagggttatgtcttcaagatc 250
||||||||||| ||||||| |||||||||||| |||||||||||| |||||||||||
Sbjct: 2 tcccaggaggtagttggtgatcttctgggtgaggaattcaagggttatatcttcaagatc 61
Query: 251 atgggtggatgtgacaagcaaggcttcccaatgaagcaaggagttttgacttctggtcgt 310
|||||||| ||||| ||||| |||||||| |||||||||||||| | |||||||| |||
Sbjct: 62 atgggtggctgtgataagcagggcttcccgatgaagcaaggagtgctaacttctgggcgt 121
Query: 311 gttcgtcttctgctccataggggcactccctgcttccgtggttatggcaggcgtaatggt 370
|| || |||||||| || |||||||| || ||||||||||||| ||||||||||||||||
Sbjct: 122 gtccgccttctgcttcacaggggcacaccttgcttccgtggttttggcaggcgtaatggt 181
Query: 371 gagcgcaggaggaagtctgtccgtggttgcatcgtgagccaagacctatctgttatcaac 430
||||||||||| ||||| |||||||||||||| || ||||||||||| ||||||||||||
Sbjct: 182 gagcgcaggagaaagtccgtccgtggttgcattgtcagccaagacctgtctgttatcaac 241
Query: 431 ttggtgattgtgaagaagggtgagaatgatctgcctggtctgactgacactgagaagcca 490
||||||||||| ||||||||||||||||||||||| || || |||||||||||||||||
Sbjct: 242 ttggtgattgtcaagaagggtgagaatgatctgccaggccttactgacactgagaagccc 301
Query: 491 aggatgaggggtcccaagagggcctccaagatcagaaagctgttcaaccttaacaaggat 550
||||||||||| ||||||||||| |||||||||| ||||| ||||||||| |||||||
Sbjct: 302 aggatgaggggacccaagagggcttccaagatcaagaagctcttcaaccttggcaaggat 361
Query: 551 gatgatgtacgcaagtacgtgaacacataccgcaggacattcactaccaagaacggcaag 610
|||||||| |||| || || ||||||||||||||||| ||| || |||||| ||||||
Sbjct: 362 gatgatgtccgcagctatgtcaacacataccgcaggaccttccttaacaagaagggcaag 421
Query: 611 aaggtcagcaaggcacctaagatccaacggcttgtgacacccttgaccctccagaggaag 670
|| || |||||||| || |||||||| || |||||||| |||||||||||||||||||||
Sbjct: 422 aaagtgagcaaggctcccaagatccagcgtcttgtgactcccttgaccctccagaggaag 481
Query: 671 cgtgctagaatcgctgacaagaagaagaggataactaagaagaagtctgaggctgctgag 730
||||| |||||||||||||||||||||||||| | ||||||||||| |||||||| |||
Sbjct: 482 cgtgccagaatcgctgacaagaagaagaggatcgccaagaagaagtcagaggctgcagag 541
Query: 731 taccagaagcttcttgcccagaggctg 757
||||||||||| ||||| || ||||||
Sbjct: 542 taccagaagctgcttgcgcaaaggctg 568
>gb|BU985302.1|BU985302 HF06L20r HF Hordeum vulgare subsp. vulgare cDNA clone HF06L20
5-PRIME, mRNA sequence
Length = 590
Score = 605 bits (305), Expect = e-171
Identities = 506/573 (88%)
Strand = Plus / Plus
Query: 266 aagcaaggcttcccaatgaagcaaggagttttgacttctggtcgtgttcgtcttctgctc 325
||||| |||||||| |||||||||||||| | |||||||| ||||| || ||||||||
Sbjct: 14 aagcagggcttcccgatgaagcaaggagtgctaacttctgggcgtgtccgccttctgctt 73
Query: 326 cataggggcactccctgcttccgtggttatggcaggcgtaatggtgagcgcaggaggaag 385
|| |||||||| || ||||||||||||| ||||||||||||||||||||||||||| |||
Sbjct: 74 cacaggggcacaccttgcttccgtggttttggcaggcgtaatggtgagcgcaggagaaag 133
Query: 386 tctgtccgtggttgcatcgtgagccaagacctatctgttatcaacttggtgattgtgaag 445
|| |||||||||||||| || ||||||||||| ||||||||||||||||||||||| |||
Sbjct: 134 tccgtccgtggttgcattgtcagccaagacctgtctgttatcaacttggtgattgtcaag 193
Query: 446 aagggtgagaatgatctgcctggtctgactgacactgagaagccaaggatgaggggtccc 505
|||||||||||||||||||| || || ||||||||||||||||| ||||||||||| |||
Sbjct: 194 aagggtgagaatgatctgccaggccttactgacactgagaagcccaggatgaggggaccc 253
Query: 506 aagagggcctccaagatcagaaagctgttcaaccttaacaaggatgatgatgtacgcaag 565
|||||||| |||||||||| ||||| ||||||||| ||||||||||||||| ||||
Sbjct: 254 aagagggcttccaagatcaagaagctcttcaaccttggcaaggatgatgatgtccgcagc 313
Query: 566 tacgtgaacacataccgcaggacattcactaccaagaacggcaagaaggtcagcaaggca 625
|| || ||||||||||||||||| ||| || |||||| ||||||||||| ||||||||
Sbjct: 314 tatgtcaacacataccgcaggaccttccttaacaagaagggcaagaaggtgagcaaggct 373
Query: 626 cctaagatccaacggcttgtgacacccttgaccctccagaggaagcgtgctagaatcgct 685
|| |||||||| || |||||||| |||||||||||||||||||||||||| |||||||||
Sbjct: 374 cccaagatccagcgtcttgtgactcccttgaccctccagaggaagcgtgccagaatcgct 433
Query: 686 gacaagaagaagaggataactaagaagaagtctgaggctgctgagtaccagaagcttctt 745
||||||||||||||||| | ||||||||||| |||||||| |||||||||||||| |||
Sbjct: 434 gacaagaagaagaggatcgccaagaagaagtcagaggctgcagagtaccagaagctgctt 493
Query: 746 gcccagaggctgaaggaacagagggaccgccggagcgagagcttggccaagaggaggtcc 805
|| || ||||||||||| ||||| |||||||| || |||||| ||||||||||||||||
Sbjct: 494 gcgcaaaggctgaaggagcagagagaccgccgcagtgagagcatggccaagaggaggtca 553
Query: 806 aagctttctgccgccgccaaggcttctgctgcc 838
||||| ||||| || | |||||| ||||||||
Sbjct: 554 aagctgtctgctgctacaaaggctcctgctgcc 586
>gb|CA009667.1|CA009667 HU14M12r HU Hordeum vulgare subsp. vulgare cDNA clone HU14M12
5-PRIME, mRNA sequence
Length = 606
Score = 605 bits (305), Expect = e-171
Identities = 512/581 (88%)
Strand = Plus / Plus
Query: 146 atcgatgacgaccagaagctgcgtgccttttatgaccgaaggatatcccaggaggtcagt 205
||||||||||||||||||||||| | |||||||| || || ||||||||||| |
Sbjct: 24 atcgatgacgaccagaagctgcggaacctttatgacaagagaatctcccaggaggtagtt 83
Query: 206 ggtgatgctctgggtgaggagttcaagggttatgtcttcaagatcatgggtggatgtgac 265
|||||| |||||||||||| |||||||||||| ||||||||||||||||||| |||||
Sbjct: 84 ggtgatcttctgggtgaggaattcaagggttatatcttcaagatcatgggtggctgtgat 143
Query: 266 aagcaaggcttcccaatgaagcaaggagttttgacttctggtcgtgttcgtcttctgctc 325
||||| |||||||| |||||||||||||| | |||||||| ||||| || ||||||||
Sbjct: 144 aagcagggcttcccgatgaagcaaggagtgctaacttctgggcgtgtccgccttctgctt 203
Query: 326 cataggggcactccctgcttccgtggttatggcaggcgtaatggtgagcgcaggaggaag 385
|| |||||||| || ||||||||||||| ||||||||||||||||||||||||||| |||
Sbjct: 204 cacaggggcacaccttgcttccgtggttttggcaggcgtaatggtgagcgcaggagaaag 263
Query: 386 tctgtccgtggttgcatcgtgagccaagacctatctgttatcaacttggtgattgtgaag 445
|| |||||||||||||| || ||||||||||| ||||||||||||||||||||||| |||
Sbjct: 264 tccgtccgtggttgcattgtcagccaagacctgtctgttatcaacttggtgattgtcaag 323
Query: 446 aagggtgagaatgatctgcctggtctgactgacactgagaagccaaggatgaggggtccc 505
|||||||||||||||||||| || || ||||||||||||||||| ||||||||||| |||
Sbjct: 324 aagggtgagaatgatctgccaggccttactgacactgagaagcccaggatgaggggaccc 383
Query: 506 aagagggcctccaagatcagaaagctgttcaaccttaacaaggatgatgatgtacgcaag 565
|||||||| |||||||||| ||||| ||||||||| ||||||||||||||| ||||
Sbjct: 384 aagagggcttccaagatcaagaagctcttcaaccttggcaaggatgatgatgtccgcagc 443
Query: 566 tacgtgaacacataccgcaggacattcactaccaagaacggcaagaaggtcagcaaggca 625
|| || ||||||||||||||||| ||| || |||||| ||||||||||| ||||||||
Sbjct: 444 tatgtcaacacataccgcaggaccttccttaacaagaagggcaagaaggtgagcaaggct 503
Query: 626 cctaagatccaacggcttgtgacacccttgaccctccagaggaagcgtgctagaatcgct 685
|| |||||||| || |||||||| |||||||||||||||||||||||||| |||||||||
Sbjct: 504 cccaagatccagcgtcttgtgactcccttgaccctccagaggaagcgtgccagaatcgct 563
Query: 686 gacaagaagaagaggataactaagaagaagtctgaggctgc 726
||||||||||||||||| | ||||||||||| ||||||||
Sbjct: 564 gacaagaagaagaggatcgccaagaagaagtcagaggctgc 604
>gb|AV915415.1|AV915415 AV915415 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags14f03 5', mRNA sequence
Length = 579
Score = 595 bits (300), Expect = e-168
Identities = 497/560 (88%), Gaps = 2/560 (0%)
Strand = Plus / Plus
Query: 218 ggtgaggagttcaagggttatgtcttcaagatcatgggtggatgtgacaagcaaggcttc 277
|||||||| |||||||||||| ||||||||||| ||||||| ||||| ||||| ||||||
Sbjct: 1 ggtgaggaattcaagggttatatcttcaagatc-tgggtggctgtgataagcagggcttc 59
Query: 278 ccaatgaagcaaggagttttgacttctggtcgtgttcgtcttctgctccataggggcact 337
||||||||||||||||| | |||||||| ||||| || |||||||| || ||||||||
Sbjct: 60 ccaatgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacaggggcaca 119
Query: 338 ccctgcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtctgtccgtggt 397
|| ||||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 120 ccttgcttccgtggttttggcaggcgtaatggtgagcgcaggagaaagtccgtccgtggt 179
Query: 398 tgcatcgtgagccaagacctatctgttatcaacttggtgattgtgaagaagggtgagaat 457
||||| || ||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 180 tgcattgtcagccaagacctgtctgttatcaacttggtgattgtcaagaagggtgagaat 239
Query: 458 gatctgcctggtctgactgacactgagaagccaaggatgaggggtcccaagagggcctcc 517
|||||||| || || ||||||||||||||||| ||||||||||| ||||||||||| |||
Sbjct: 240 gatctgccaggccttactgacactgagaagcccaggatgaggggacccaagagggcttcc 299
Query: 518 aagatcagaaagctgttcaaccttaacaaggatgatgatgtacgcaagtacgtgaacaca 577
||||||| ||||| ||||||||| ||||||||||||||| |||| || || ||||||
Sbjct: 300 aagatcaagaagctcttcaaccttggcaaggatgatgatgtccgcagctatgtcaacaca 359
Query: 578 taccgcaggacattcactaccaagaacggcaagaaggtcagcaaggcacctaagatccaa 637
||||||||||| ||| || |||||| ||||||||||| |||||||| || ||||||||
Sbjct: 360 taccgcaggaccttccttaacaagaagggcaagaaggtgagcaaggctcccaagatccag 419
Query: 638 cggcttgtgacacccttgaccctccaga-ggaagcgtgctagaatcgctgacaagaagaa 696
|| |||||||| |||||||||||||||| |||||||||| |||||||| |||||||||||
Sbjct: 420 cgtcttgtgactcccttgaccctccagagggaagcgtgccagaatcgccgacaagaagaa 479
Query: 697 gaggataactaagaagaagtctgaggctgctgagtaccagaagcttcttgcccagaggct 756
|||||| | ||||||||||| |||||||| |||||||||||||| ||||| || |||||
Sbjct: 480 gaggatcgccaagaagaagtcagaggctgcagagtaccagaagctgcttgcgcaaaggct 539
Query: 757 gaaggaacagagggaccgcc 776
|||||| ||||| |||||||
Sbjct: 540 gaaggagcagagagaccgcc 559
>gb|BJ465513.1|BJ465513 BJ465513 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags29i22 5', mRNA sequence
Length = 660
Score = 595 bits (300), Expect = e-168
Identities = 534/612 (87%)
Strand = Plus / Plus
Query: 205 tggtgatgctctgggtgaggagttcaagggttatgtcttcaagatcatgggtggatgtga 264
||||||| |||||||||||| ||| |||| ||| ||||||||||||||||||| || ||
Sbjct: 42 tggtgatcttctgggtgaggaattcgagggctatatcttcaagatcatgggtggctgcga 101
Query: 265 caagcaaggcttcccaatgaagcaaggagttttgacttctggtcgtgttcgtcttctgct 324
||||| ||||||||||||||||||||||| | ||| |||| || ||||| ||||||||
Sbjct: 102 taagcagggcttcccaatgaagcaaggagtgctaactcctgggcgcgttcgccttctgct 161
Query: 325 ccataggggcactccctgcttccgtggttatggcaggcgtaatggtgagcgcaggaggaa 384
|| |||||||| | ||||| ||||| ||||||||||| |||||||||| |||||||
Sbjct: 162 tcacaggggcacatcttgctttcgtggacatggcaggcgtgttggtgagcgccggaggaa 221
Query: 385 gtctgtccgtggttgcatcgtgagccaagacctatctgttatcaacttggtgattgtgaa 444
|||||| ||||||||||| || |||||||| |||||||||||||||||||||||||| ||
Sbjct: 222 gtctgttcgtggttgcattgtcagccaagatctatctgttatcaacttggtgattgtcaa 281
Query: 445 gaagggtgagaatgatctgcctggtctgactgacactgagaagccaaggatgaggggtcc 504
|||||| ||||||||||||| || |||||||||||||||||||| ||||||||||| ||
Sbjct: 282 gaagggcaagaatgatctgccaggcctgactgacactgagaagcccaggatgaggggacc 341
Query: 505 caagagggcctccaagatcagaaagctgttcaaccttaacaaggatgatgatgtacgcaa 564
||| ||||| |||||||||| ||||| ||||||||| ||||||||||||||| ||| |
Sbjct: 342 caaaagggcttccaagatcaagaagctcttcaaccttggcaaggatgatgatgtccgcca 401
Query: 565 gtacgtgaacacataccgcaggacattcactaccaagaacggcaagaaggtcagcaaggc 624
||| || ||||||||||||||| | ||||| | |||||| ||||||| || ||||||||
Sbjct: 402 gtatgtcaacacataccgcaggtccttcacgaacaagaagggcaagaccgtgagcaaggc 461
Query: 625 acctaagatccaacggcttgtgacacccttgaccctccagaggaagcgtgctagaatcgc 684
|| |||||||| || |||||||||||||||||| |||||||||||||||| ||||||||
Sbjct: 462 tcccaagatccagcgtcttgtgacacccttgaccatccagaggaagcgtgccagaatcgc 521
Query: 685 tgacaagaagaagaggataactaagaagaagtctgaggctgctgagtaccagaagcttct 744
||||||||||||||||| |||||||||||||||||||||| |||||||||||||| ||
Sbjct: 522 cgacaagaagaagaggattgctaagaagaagtctgaggctgcagagtaccagaagctgct 581
Query: 745 tgcccagaggctgaaggaacagagggaccgccggagcgagagcttggccaagaggaggtc 804
||| |||||| ||||||| || || |||||| |||| |||||| ||||||||||||||||
Sbjct: 582 tgcacagaggttgaaggagcaaagagaccgcaggagtgagagcatggccaagaggaggtc 641
Query: 805 caagctttctgc 816
|||||||||||
Sbjct: 642 gaagctttctgc 653
>gb|CA015294.1|CA015294 HT13N23r HT Hordeum vulgare subsp. vulgare cDNA clone HT13N23
5-PRIME, mRNA sequence
Length = 639
Score = 595 bits (300), Expect = e-168
Identities = 534/612 (87%)
Strand = Plus / Plus
Query: 205 tggtgatgctctgggtgaggagttcaagggttatgtcttcaagatcatgggtggatgtga 264
||||||| |||||||||||| ||| |||| ||| ||||||||||||||||||| || ||
Sbjct: 28 tggtgatcttctgggtgaggaattcgagggctatatcttcaagatcatgggtggctgcga 87
Query: 265 caagcaaggcttcccaatgaagcaaggagttttgacttctggtcgtgttcgtcttctgct 324
||||| ||||||||||||||||||||||| | ||| |||| || ||||| ||||||||
Sbjct: 88 taagcagggcttcccaatgaagcaaggagtgctaactcctgggcgcgttcgccttctgct 147
Query: 325 ccataggggcactccctgcttccgtggttatggcaggcgtaatggtgagcgcaggaggaa 384
|| |||||||| | ||||| ||||| ||||||||||| |||||||||| |||||||
Sbjct: 148 tcacaggggcacatcttgctttcgtggacatggcaggcgtgttggtgagcgccggaggaa 207
Query: 385 gtctgtccgtggttgcatcgtgagccaagacctatctgttatcaacttggtgattgtgaa 444
|||||| ||||||||||| || |||||||| |||||||||||||||||||||||||| ||
Sbjct: 208 gtctgttcgtggttgcattgtcagccaagatctatctgttatcaacttggtgattgtcaa 267
Query: 445 gaagggtgagaatgatctgcctggtctgactgacactgagaagccaaggatgaggggtcc 504
|||||| ||||||||||||| || |||||||||||||||||||| ||||||||||| ||
Sbjct: 268 gaagggcaagaatgatctgccaggcctgactgacactgagaagcccaggatgaggggacc 327
Query: 505 caagagggcctccaagatcagaaagctgttcaaccttaacaaggatgatgatgtacgcaa 564
||| ||||| |||||||||| ||||| ||||||||| ||||||||||||||| ||| |
Sbjct: 328 caaaagggcttccaagatcaagaagctcttcaaccttggcaaggatgatgatgtccgcca 387
Query: 565 gtacgtgaacacataccgcaggacattcactaccaagaacggcaagaaggtcagcaaggc 624
||| || ||||||||||||||| | ||||| | |||||| ||||||| || ||||||||
Sbjct: 388 gtatgtcaacacataccgcaggtccttcacgaacaagaagggcaagaccgtgagcaaggc 447
Query: 625 acctaagatccaacggcttgtgacacccttgaccctccagaggaagcgtgctagaatcgc 684
|| |||||||| || |||||||||||||||||| |||||||||||||||| ||||||||
Sbjct: 448 tcccaagatccagcgtcttgtgacacccttgaccatccagaggaagcgtgccagaatcgc 507
Query: 685 tgacaagaagaagaggataactaagaagaagtctgaggctgctgagtaccagaagcttct 744
||||||||||||||||| |||||||||||||||||||||| |||||||||||||| ||
Sbjct: 508 cgacaagaagaagaggattgctaagaagaagtctgaggctgcagagtaccagaagctgct 567
Query: 745 tgcccagaggctgaaggaacagagggaccgccggagcgagagcttggccaagaggaggtc 804
||| |||||| ||||||| || || |||||| |||| |||||| ||||||||||||||||
Sbjct: 568 tgcacagaggttgaaggagcaaagagaccgcaggagtgagagcatggccaagaggaggtc 627
Query: 805 caagctttctgc 816
|||||||||||
Sbjct: 628 gaagctttctgc 639
>gb|BM374906.1|BM374906 EBma05_SQ003_I02_R maternal, 12 DPA, no treatment, cv Optic, EBma05
Hordeum vulgare subsp. vulgare cDNA clone
EBma05_SQ003_I02 5', mRNA sequence
Length = 645
Score = 567 bits (286), Expect = e-160
Identities = 535/618 (86%)
Strand = Plus / Plus
Query: 42 ccacccagcgctcgagctcctcgctccctgcgagcgcgcgccgcaacgccaccatgaagt 101
|||||||||| ||| | | ||||| || |||||| || |||||||| |||||||||||
Sbjct: 28 ccacccagcgttcgggttgctcgccgccggcgagctcgtgccgcaactccaccatgaagc 87
Query: 102 tcaacatcgcgaacccttccaccgggtgccaaaagaagctggaaatcgatgacgaccaga 161
| |||||||||||||| |||| |||||||| |||||| | || ||||||||||||||||
Sbjct: 88 tgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgacgaccaga 147
Query: 162 agctgcgtgccttttatgaccgaaggatatcccaggaggtcagtggtgatgctctgggtg 221
||||||| | |||||||| || || ||||||||||| ||||||| ||||||||
Sbjct: 148 agctgcggaacctttatgacaagagaatctcccaggaggtagttggtgatcttctgggtg 207
Query: 222 aggagttcaagggttatgtcttcaagatcatgggtggatgtgacaagcaaggcttcccaa 281
|||| |||||||||||| ||||||||||||||||||| ||||| ||||| |||||||| |
Sbjct: 208 aggaattcaagggttatatcttcaagatcatgggtggctgtgataagcagggcttcccga 267
Query: 282 tgaagcaaggagttttgacttctggtcgtgttcgtcttctgctccataggggcactccct 341
||||||||||||| | |||||||| ||||| || |||||||| || |||||||| || |
Sbjct: 268 tgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacaggggcacacctt 327
Query: 342 gcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtctgtccgtggttgca 401
|||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 328 gcttccgtggttttggcaggcgtaatggtgagcgcaggagaaagtccgtccgtggttgca 387
Query: 402 tcgtgagccaagacctatctgttatcaacttggtgattgtgaagaagggtgagaatgatc 461
| || ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 388 ttgtcagccaagacctgtctgttatcaacttggtgattgtcaagaagggtgagaatgatc 447
Query: 462 tgcctggtctgactgacactgagaagccaaggatgaggggtcccaagagggcctccaaga 521
|||| || || ||||||||||||||||| ||||||||||| ||||||||||| |||||||
Sbjct: 448 tgccaggccttactgacactgagaagcccaggatgaggggacccaagagggcttccaaga 507
Query: 522 tcagaaagctgttcaaccttaacaaggatgatgatgtacgcaagtacgtgaacacatacc 581
||| ||||| ||||||||| ||||||||||||||| |||| || || ||||||||||
Sbjct: 508 tcaagaagctcttcaaccttggcaaggatgatgatgtccgcagctatgtcaacacatacc 567
Query: 582 gcaggacattcactaccaagaacggcaagaaggtcagcaaggcacctaagatccaacggc 641
||||||| ||| || |||||| ||||||||||| |||||||| || |||||||| || |
Sbjct: 568 gcaggaccttccttaacaagaagggcaagaaggtgagcaaggctcccaagatccagcgtc 627
Query: 642 ttgtgacacccttgaccc 659
||||||| ||||||||||
Sbjct: 628 ttgtgactcccttgaccc 645
>gb|AV913840.1|AV913840 AV913840 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags23h18 5', mRNA sequence
Length = 627
Score = 567 bits (286), Expect = e-160
Identities = 538/622 (86%)
Strand = Plus / Plus
Query: 141 tggaaatcgatgacgaccagaagctgcgtgccttttatgaccgaaggatatcccaggagg 200
|||| ||||||||||||||||||||||| | |||||||| || || ||||||||||
Sbjct: 1 tggagatcgatgacgaccagaagctgcgaaacctttatgacaagagaatctcccaggagg 60
Query: 201 tcagtggtgatgctctgggtgaggagttcaagggttatgtcttcaagatcatgggtggat 260
| ||||||| |||||||||||| ||| |||| ||| ||||||||||||||||||| |
Sbjct: 61 tagttggtgatcttctgggtgaggaattcgagggctatatcttcaagatcatgggtggct 120
Query: 261 gtgacaagcaaggcttcccaatgaagcaaggagttttgacttctggtcgtgttcgtcttc 320
| || ||||| ||||||||||||||||||||||| | ||| |||| || ||||| ||||
Sbjct: 121 gcgataagcagggcttcccaatgaagcaaggagtgctaactcctgggcgcgttcgccttc 180
Query: 321 tgctccataggggcactccctgcttccgtggttatggcaggcgtaatggtgagcgcagga 380
|||| || |||||||| | ||||| ||||| ||||||||||| |||||||||| |||
Sbjct: 181 tgcttcacaggggcacatcttgctttcgtggacatggcaggcgtgttggtgagcgccgga 240
Query: 381 ggaagtctgtccgtggttgcatcgtgagccaagacctatctgttatcaacttggtgattg 440
|||||||||| ||||||||||| || |||||||| |||||||||||||||||||||||||
Sbjct: 241 ggaagtctgttcgtggttgcattgtcagccaagatctatctgttatcaacttggtgattg 300
Query: 441 tgaagaagggtgagaatgatctgcctggtctgactgacactgagaagccaaggatgaggg 500
| |||||||| ||||||||||||| || |||||||||||||||||||| ||||||||||
Sbjct: 301 tcaagaagggcaagaatgatctgccaggcctgactgacactgagaagcccaggatgaggg 360
Query: 501 gtcccaagagggcctccaagatcagaaagctgttcaaccttaacaaggatgatgatgtac 560
| ||||| ||||| |||||||||| ||||| ||||||||| ||||||||||||||| |
Sbjct: 361 gacccaaaagggcttccaagatcaagaagctcttcaaccttggcaaggatgatgatgtcc 420
Query: 561 gcaagtacgtgaacacataccgcaggacattcactaccaagaacggcaagaaggtcagca 620
|| |||| || ||||||||||||||| | ||||| | |||||| ||||||| || ||||
Sbjct: 421 gccagtatgtcaacacataccgcaggtccttcacgaacaagaagggcaagaccgtgagca 480
Query: 621 aggcacctaagatccaacggcttgtgacacccttgaccctccagaggaagcgtgctagaa 680
|||| || |||||||| || |||||||||||||||||| |||||||||||||||| ||||
Sbjct: 481 aggctcccaagatccagcgtcttgtgacacccttgaccatccagaggaagcgtgccagaa 540
Query: 681 tcgctgacaagaagaagaggataactaagaagaagtctgaggctgctgagtaccagaagc 740
|||| ||||||||||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct: 541 tcgccgacaagaagaagaggattgctaagaagaagtctgaggctgcagagtaccagaagc 600
Query: 741 ttcttgcccagaggctgaagga 762
| ||||| |||||| |||||||
Sbjct: 601 tgcttgcacagaggttgaagga 622
>gb|AL506220.1|AL506220 AL506220 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY02G18T 5',
mRNA sequence
Length = 688
Score = 565 bits (285), Expect = e-159
Identities = 471/532 (88%), Gaps = 1/532 (0%)
Strand = Plus / Plus
Query: 299 acttctggtcgtgttcgtcttctgctccataggggcactccctgcttccgtggttatggc 358
|||||||| ||||| || |||||||| || |||||||| || ||||||||||||| ||||
Sbjct: 16 acttctgggcgtgtccgccttctgcttcacaggggcacaccttgcttccgtggttttggc 75
Query: 359 aggcgtaatggtgagcgcaggaggaagtctgtccgtggttgcatcgtgagccaagaccta 418
||||||||||||||||||||||| ||||| |||||||||||||| || |||||||||||
Sbjct: 76 aggcgtaatggtgagcgcaggagaaagtccgtccgtggttgcattgtcagccaagacctg 135
Query: 419 tctgttatcaacttggtgattgtgaagaagggtgagaatgatctgcctggtctgactgac 478
||||||||||||||||||||||| |||||||||||||||||||| || || || ||||||
Sbjct: 136 tctgttatcaacttggtgattgtcaagaagggtgagaatgatctaccaggccttactgac 195
Query: 479 actgagaagccaaggatgaggggtcccaagagggcctccaagatcagaaagctgttcaac 538
||||||||||| ||||||||||| ||||||||||| |||||||||| ||||| ||||||
Sbjct: 196 actgagaagcccaggatgaggggacccaagagggcttccaagatcaagaagctcttcaac 255
Query: 539 cttaacaaggatgatgatgtacgcaagtacgtgaacacataccgcaggacattcactacc 598
||| ||||||||||||||| |||| || || ||||||||||||||||| ||| || |
Sbjct: 256 cttggcaaggatgatgatgtccgcagctatgtcaacacataccgcaggaccttccttaac 315
Query: 599 aagaacggcaagaaggtcagcaaggcacctaagatccaacggcttgtgacacccttgacc 658
||||| || |||||||| |||||||| || |||||||| || |||||||| |||||||||
Sbjct: 316 aagaagggaaagaaggtgagcaaggcccccaagatccagcgtcttgtgactcccttgacc 375
Query: 659 ctccagaggaagcgtgctagaatcgctgacaagaagaagaggataactaagaagaagtct 718
||||||||||||||||| | |||||| ||||||||||||||||| | |||||||||||
Sbjct: 376 ctccagaggaagcgtgccanaatcgccgacaagaagaagaggatcgccaagaagaagtca 435
Query: 719 gaggctgctgagtaccagaagcttcttgcccagaggctgaaggaacagagggaccgccgg 778
|||||||| |||||||||||||| ||||| |||||||||||||| |||||||| ||||||
Sbjct: 436 gaggctgcagagtaccagaagctgcttgcacagaggctgaaggagcagagggatcgccgg 495
Query: 779 agcgagagcttggccaagaggaggtcc-aagctttctgccgccgccaaggct 829
|| |||||| ||||||||||||||||| ||||| ||||| ||| ||||||||
Sbjct: 496 agtgagagcatggccaagaggaggtccgaagctgtctgctgccaccaaggct 547
>gb|BQ768358.1|BQ768358 EBro08_SQ011_A15_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ011_A15 5', mRNA sequence
Length = 642
Score = 559 bits (282), Expect = e-158
Identities = 534/618 (86%)
Strand = Plus / Plus
Query: 42 ccacccagcgctcgagctcctcgctccctgcgagcgcgcgccgcaacgccaccatgaagt 101
|||||||||| ||| | | ||||| || |||||| || |||||||| |||||||||||
Sbjct: 25 ccacccagcgttcgggttgctcgccgccggcgagctcgtgccgcaactccaccatgaagc 84
Query: 102 tcaacatcgcgaacccttccaccgggtgccaaaagaagctggaaatcgatgacgaccaga 161
| |||||||||||||| |||| |||||||| |||||| | || ||||||||||||||||
Sbjct: 85 tgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgacgaccaga 144
Query: 162 agctgcgtgccttttatgaccgaaggatatcccaggaggtcagtggtgatgctctgggtg 221
||||||| | |||||||| || || ||||||||||| ||||||| ||||||||
Sbjct: 145 agctgcggaacctttatgacaagagaatctcccaggaggtagttggtgatcttctgggtg 204
Query: 222 aggagttcaagggttatgtcttcaagatcatgggtggatgtgacaagcaaggcttcccaa 281
|||| |||||||||||| ||||||||||||||||||| ||||| ||||| |||||||| |
Sbjct: 205 aggaattcaagggttatatcttcaagatcatgggtggctgtgataagcagggcttcccga 264
Query: 282 tgaagcaaggagttttgacttctggtcgtgttcgtcttctgctccataggggcactccct 341
||||||||||||| | |||||||| ||||| || |||||||| || |||||||| || |
Sbjct: 265 tgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacaggggcacacctt 324
Query: 342 gcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtctgtccgtggttgca 401
|||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 325 gcttccgtggttttggcaggcgtaatggtgagcgcaggagaaagtccgtccgtggttgca 384
Query: 402 tcgtgagccaagacctatctgttatcaacttggtgattgtgaagaagggtgagaatgatc 461
| || ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 385 ttgtcagccaagacctgtctgttatcaacttggtgattgtcaagaagggtgagaatgatc 444
Query: 462 tgcctggtctgactgacactgagaagccaaggatgaggggtcccaagagggcctccaaga 521
|||| || || ||||||||||||||||| ||||||||||| ||||||||||| |||||||
Sbjct: 445 tgccaggccttactgacactgagaagcccaggatgaggggacccaagagggcttccaaga 504
Query: 522 tcagaaagctgttcaaccttaacaaggatgatgatgtacgcaagtacgtgaacacatacc 581
||| ||||| ||||||||| ||||||||||||||| |||| || || ||||||||||
Sbjct: 505 tcaagaagctcttcaaccttggcaaggatgatgatgtccgcagctatgtcaacacatacc 564
Query: 582 gcaggacattcactaccaagaacggcaagaaggtcagcaaggcacctaagatccaacggc 641
| ||||| ||| || |||||| ||||||||||| |||||||| || |||||||| || |
Sbjct: 565 gtaggaccttccttaacaagaagggcaagaaggtgagcaaggctcccaagatccagcgtc 624
Query: 642 ttgtgacacccttgaccc 659
||||||| ||||||||||
Sbjct: 625 ttgtgactcccttgaccc 642
>gb|BQ466607.1|BQ466607 HS01B03T HS Hordeum vulgare subsp. vulgare cDNA clone HS01B03
5-PRIME, mRNA sequence
Length = 656
Score = 557 bits (281), Expect = e-157
Identities = 530/613 (86%)
Strand = Plus / Plus
Query: 42 ccacccagcgctcgagctcctcgctccctgcgagcgcgcgccgcaacgccaccatgaagt 101
|||||||||| ||| | | ||||| || |||||| || |||||||| |||||||||||
Sbjct: 44 ccacccagcgttcgggttgctcgccgccggcgagctcgtgccgcaactccaccatgaagc 103
Query: 102 tcaacatcgcgaacccttccaccgggtgccaaaagaagctggaaatcgatgacgaccaga 161
| |||||||||||||| |||| |||||||| |||||| | || ||||||||||||||||
Sbjct: 104 tgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgacgaccaga 163
Query: 162 agctgcgtgccttttatgaccgaaggatatcccaggaggtcagtggtgatgctctgggtg 221
||||||| | |||||||| || || ||||||||||| ||||||| ||||||||
Sbjct: 164 agctgcggaacctttatgacaagagaatctcccaggaggtagttggtgatcttctgggtg 223
Query: 222 aggagttcaagggttatgtcttcaagatcatgggtggatgtgacaagcaaggcttcccaa 281
|||| |||||||||||| ||||||||||||||||||| ||||| ||||| |||||||| |
Sbjct: 224 aggaattcaagggttatatcttcaagatcatgggtggctgtgataagcagggcttcccga 283
Query: 282 tgaagcaaggagttttgacttctggtcgtgttcgtcttctgctccataggggcactccct 341
||||||||||||| | |||||||| ||||| || |||||||| || |||||||| || |
Sbjct: 284 tgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacaggggcacacctt 343
Query: 342 gcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtctgtccgtggttgca 401
|||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 344 gcttccgtggttttggcaggcgtaatggtgagcgcaggagaaagtccgtccgtggttgca 403
Query: 402 tcgtgagccaagacctatctgttatcaacttggtgattgtgaagaagggtgagaatgatc 461
| || ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 404 ttgtcagccaagacctgtctgttatcaacttggtgattgtcaagaagggtgagaatgatc 463
Query: 462 tgcctggtctgactgacactgagaagccaaggatgaggggtcccaagagggcctccaaga 521
|||| || || ||||||||||||||||| ||||||||||| ||||||||||| |||||||
Sbjct: 464 tgccaggccttactgacactgagaagcccaggatgaggggacccaagagggcttccaaga 523
Query: 522 tcagaaagctgttcaaccttaacaaggatgatgatgtacgcaagtacgtgaacacatacc 581
||| ||||| ||||||||| ||||||||||||||| |||| || || ||||||||||
Sbjct: 524 tcaagaagctcttcaaccttggcaaggatgatgatgtccgcagctatgtcaacacatacc 583
Query: 582 gcaggacattcactaccaagaacggcaagaaggtcagcaaggcacctaagatccaacggc 641
||||||| ||| || |||||| ||||||||||| |||||||| || |||||||| || |
Sbjct: 584 gcaggaccttccttaacaagaagggcaagaaggtgagcaaggctcccaagatccagcgtc 643
Query: 642 ttgtgacaccctt 654
||||||| |||||
Sbjct: 644 ttgtgactccctt 656
>gb|BU997402.1|BU997402 HI07O02r HI Hordeum vulgare subsp. vulgare cDNA clone HI07O02
5-PRIME, mRNA sequence
Length = 642
Score = 553 bits (279), Expect = e-156
Identities = 525/607 (86%)
Strand = Plus / Plus
Query: 42 ccacccagcgctcgagctcctcgctccctgcgagcgcgcgccgcaacgccaccatgaagt 101
|||||||||| ||| | | ||||| || |||||| || |||||||| |||||||||||
Sbjct: 35 ccacccagcgttcgggttgctcgccgccggcgagctcgtgccgcaactccaccatgaagc 94
Query: 102 tcaacatcgcgaacccttccaccgggtgccaaaagaagctggaaatcgatgacgaccaga 161
| |||||||||||||| |||| |||||||| |||||| | || ||||||||||||||||
Sbjct: 95 tgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgacgaccaga 154
Query: 162 agctgcgtgccttttatgaccgaaggatatcccaggaggtcagtggtgatgctctgggtg 221
||||||| | |||||||| || || ||||||||||| ||||||| ||||||||
Sbjct: 155 agctgcggaacctttatgacaagagaatctcccaggaggtagttggtgatcttctgggtg 214
Query: 222 aggagttcaagggttatgtcttcaagatcatgggtggatgtgacaagcaaggcttcccaa 281
|||| |||||||||||| ||||||||||||||||||| ||||| ||||| |||||||| |
Sbjct: 215 aggaattcaagggttatatcttcaagatcatgggtggctgtgataagcagggcttcccga 274
Query: 282 tgaagcaaggagttttgacttctggtcgtgttcgtcttctgctccataggggcactccct 341
||||||||||||| | |||||||| ||||| || |||||||| || |||||||| || |
Sbjct: 275 tgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacaggggcacacctt 334
Query: 342 gcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtctgtccgtggttgca 401
|||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 335 gcttccgtggttttggcaggcgtaatggtgagcgcaggagaaagtccgtccgtggttgca 394
Query: 402 tcgtgagccaagacctatctgttatcaacttggtgattgtgaagaagggtgagaatgatc 461
| || ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 395 ttgtcagccaagacctgtctgttatcaacttggtgattgtcaagaagggtgagaatgatc 454
Query: 462 tgcctggtctgactgacactgagaagccaaggatgaggggtcccaagagggcctccaaga 521
|||| || || ||||||||||||||||| ||||||||||| ||||||||||| |||||||
Sbjct: 455 tgccaggccttactgacactgagaagcccaggatgaggggacccaagagggcttccaaga 514
Query: 522 tcagaaagctgttcaaccttaacaaggatgatgatgtacgcaagtacgtgaacacatacc 581
||| ||||| ||||||||| ||||||||||||||| |||| || || ||||||||||
Sbjct: 515 tcaagaagctcttcaaccttggcaaggatgatgatgtccgcagctatgtcaacacatacc 574
Query: 582 gcaggacattcactaccaagaacggcaagaaggtcagcaaggcacctaagatccaacggc 641
||||||| ||| || |||||| ||||||||||| |||||||| || |||||||| || |
Sbjct: 575 gcaggaccttccttaacaagaagggcaagaaggtgagcaaggctcccaagatccagcgtc 634
Query: 642 ttgtgac 648
|||||||
Sbjct: 635 ttgtgac 641
>gb|CA025165.1|CA025165 HZ51G09r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ51G09
5-PRIME, mRNA sequence
Length = 655
Score = 553 bits (279), Expect = e-156
Identities = 525/607 (86%)
Strand = Plus / Plus
Query: 42 ccacccagcgctcgagctcctcgctccctgcgagcgcgcgccgcaacgccaccatgaagt 101
|||||||||| ||| | | ||||| || |||||| || |||||||| |||||||||||
Sbjct: 45 ccacccagcgttcgggttgctcgccgccggcgagctcgtgccgcaactccaccatgaagc 104
Query: 102 tcaacatcgcgaacccttccaccgggtgccaaaagaagctggaaatcgatgacgaccaga 161
| |||||||||||||| |||| |||||||| |||||| | || ||||||||||||||||
Sbjct: 105 tgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgacgaccaga 164
Query: 162 agctgcgtgccttttatgaccgaaggatatcccaggaggtcagtggtgatgctctgggtg 221
||||||| | |||||||| || || ||||||||||| ||||||| ||||||||
Sbjct: 165 agctgcggaacctttatgacaagagaatctcccaggaggtagttggtgatcttctgggtg 224
Query: 222 aggagttcaagggttatgtcttcaagatcatgggtggatgtgacaagcaaggcttcccaa 281
|||| |||||||||||| ||||||||||||||||||| ||||| ||||| |||||||| |
Sbjct: 225 aggaattcaagggttatatcttcaagatcatgggtggctgtgataagcagggcttcccga 284
Query: 282 tgaagcaaggagttttgacttctggtcgtgttcgtcttctgctccataggggcactccct 341
||||||||||||| | |||||||| ||||| || |||||||| || |||||||| || |
Sbjct: 285 tgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacaggggcacacctt 344
Query: 342 gcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtctgtccgtggttgca 401
|||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 345 gcttccgtggttttggcaggcgtaatggtgagcgcaggagaaagtccgtccgtggttgca 404
Query: 402 tcgtgagccaagacctatctgttatcaacttggtgattgtgaagaagggtgagaatgatc 461
| || ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 405 ttgtcagccaagacctgtctgttatcaacttggtgattgtcaagaagggtgagaatgatc 464
Query: 462 tgcctggtctgactgacactgagaagccaaggatgaggggtcccaagagggcctccaaga 521
|||| || || ||||||||||||||||| ||||||||||| ||||||||||| |||||||
Sbjct: 465 tgccaggccttactgacactgagaagcccaggatgaggggacccaagagggcttccaaga 524
Query: 522 tcagaaagctgttcaaccttaacaaggatgatgatgtacgcaagtacgtgaacacatacc 581
||| ||||| ||||||||| ||||||||||||||| |||| || || ||||||||||
Sbjct: 525 tcaagaagctcttcaaccttggcaaggatgatgatgtccgcagctatgtcaacacatacc 584
Query: 582 gcaggacattcactaccaagaacggcaagaaggtcagcaaggcacctaagatccaacggc 641
||||||| ||| || |||||| ||||||||||| |||||||| || |||||||| || |
Sbjct: 585 gcaggaccttccttaacaagaagggcaagaaggtgagcaaggctcccaagatccagcgtc 644
Query: 642 ttgtgac 648
|||||||
Sbjct: 645 ttgtgac 651
>gb|CB858170.1|CB858170 HI06A17w HI Hordeum vulgare subsp. vulgare cDNA clone HI06A17
3-PRIME, mRNA sequence
Length = 644
Score = 551 bits (278), Expect = e-155
Identities = 503/578 (87%)
Strand = Plus / Plus
Query: 71 gcgagcgcgcgccgcaacgccaccatgaagttcaacatcgcgaacccttccaccgggtgc 130
|||||| || |||||||| ||||||||||| | |||||||||||||| |||| ||||||
Sbjct: 63 gcgagctcgtgccgcaactccaccatgaagctgaacatcgcgaaccccaccacggggtgc 122
Query: 131 caaaagaagctggaaatcgatgacgaccagaagctgcgtgccttttatgaccgaaggata 190
|| |||||| | || ||||||||||||||||||||||| | |||||||| || ||
Sbjct: 123 cagaagaaggtcgagatcgatgacgaccagaagctgcggaacctttatgacaagagaatc 182
Query: 191 tcccaggaggtcagtggtgatgctctgggtgaggagttcaagggttatgtcttcaagatc 250
||||||||||| ||||||| |||||||||||| |||||||||||| |||||||||||
Sbjct: 183 tcccaggaggtagttggtgatcttctgggtgaggaattcaagggttatatcttcaagatc 242
Query: 251 atgggtggatgtgacaagcaaggcttcccaatgaagcaaggagttttgacttctggtcgt 310
|||||||| ||||| ||||| |||||||| |||||||||||||| | |||||||| |||
Sbjct: 243 atgggtggctgtgataagcagggcttcccgatgaagcaaggagtgctaacttctgggcgt 302
Query: 311 gttcgtcttctgctccataggggcactccctgcttccgtggttatggcaggcgtaatggt 370
|| || |||||||| || |||||||| || ||||||||||||| ||||||||||||||||
Sbjct: 303 gtccgccttctgcttcacaggggcacaccttgcttccgtggttttggcaggcgtaatggt 362
Query: 371 gagcgcaggaggaagtctgtccgtggttgcatcgtgagccaagacctatctgttatcaac 430
||||||||||| ||||| |||||||||||||| || ||||||||||| ||||||||||||
Sbjct: 363 gagcgcaggagaaagtccgtccgtggttgcattgtcagccaagacctgtctgttatcaac 422
Query: 431 ttggtgattgtgaagaagggtgagaatgatctgcctggtctgactgacactgagaagcca 490
||||||||||| ||||||||||||||||||||||| || || |||||||||||||||||
Sbjct: 423 ttggtgattgtcaagaagggtgagaatgatctgccaggccttactgacactgagaagccc 482
Query: 491 aggatgaggggtcccaagagggcctccaagatcagaaagctgttcaaccttaacaaggat 550
||||||||||| ||||||||||| |||||||||| ||||| ||||||||| |||||||
Sbjct: 483 aggatgaggggacccaagagggcttccaagatcaagaagctcttcaaccttggcaaggat 542
Query: 551 gatgatgtacgcaagtacgtgaacacataccgcaggacattcactaccaagaacggcaag 610
|||||||| |||| || || ||||||||||||||||| ||| || |||||| ||||||
Sbjct: 543 gatgatgtccgcagctatgtcaacacataccgcaggaccttccttaacaagaagggcaag 602
Query: 611 aaggtcagcaaggcacctaagatccaacggcttgtgac 648
||||| |||||||| || |||||||| || ||||||||
Sbjct: 603 aaggtgagcaaggctcccaagatccagcgtcttgtgac 640
>gb|CA006977.1|CA006977 HU06E22r HU Hordeum vulgare subsp. vulgare cDNA clone HU06E22
5-PRIME, mRNA sequence
Length = 612
Score = 545 bits (275), Expect = e-153
Identities = 515/595 (86%)
Strand = Plus / Plus
Query: 42 ccacccagcgctcgagctcctcgctccctgcgagcgcgcgccgcaacgccaccatgaagt 101
|||||||||| ||| | | ||||| || |||||| || |||||||| |||||||||||
Sbjct: 14 ccacccagcgttcgggttgctcgccgccggcgagctcgtgccgcaactccaccatgaagc 73
Query: 102 tcaacatcgcgaacccttccaccgggtgccaaaagaagctggaaatcgatgacgaccaga 161
| |||||||||||||| |||| |||||||| |||||| | || ||||||||||||||||
Sbjct: 74 tgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgacgaccaga 133
Query: 162 agctgcgtgccttttatgaccgaaggatatcccaggaggtcagtggtgatgctctgggtg 221
||||||| | |||||||| || || ||||||||||| ||||||| ||||||||
Sbjct: 134 agctgcggaacctttatgacaagagaatctcccaggaggtagttggtgatcttctgggtg 193
Query: 222 aggagttcaagggttatgtcttcaagatcatgggtggatgtgacaagcaaggcttcccaa 281
|||| |||||||||||| ||||||||||||||||||| ||||| ||||| |||||||| |
Sbjct: 194 aggaattcaagggttatatcttcaagatcatgggtggctgtgataagcagggcttcccga 253
Query: 282 tgaagcaaggagttttgacttctggtcgtgttcgtcttctgctccataggggcactccct 341
||||||||||||| | |||||||| ||||| || |||||||| || |||||||| || |
Sbjct: 254 tgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacaggggcacacctt 313
Query: 342 gcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtctgtccgtggttgca 401
|||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 314 gcttccgtggttttggcaggcgtaatggtgagcgcaggagaaagtccgtccgtggttgca 373
Query: 402 tcgtgagccaagacctatctgttatcaacttggtgattgtgaagaagggtgagaatgatc 461
| || ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 374 ttgtcagccaagacctgtctgttatcaacttggtgattgtcaagaagggtgagaatgatc 433
Query: 462 tgcctggtctgactgacactgagaagccaaggatgaggggtcccaagagggcctccaaga 521
|||| || || ||||||||||||||||| ||||||||||| ||||||||||| |||||||
Sbjct: 434 tgccaggccttactgacactgagaagcccaggatgaggggacccaagagggcttccaaga 493
Query: 522 tcagaaagctgttcaaccttaacaaggatgatgatgtacgcaagtacgtgaacacatacc 581
||| ||||| ||||||||| ||||||||||||||| |||| || || ||||||||||
Sbjct: 494 tcaagaagctcttcaaccttggcaaggatgatgatgtccgcagctatgtcaacacatacc 553
Query: 582 gcaggacattcactaccaagaacggcaagaaggtcagcaaggcacctaagatcca 636
||||||| ||| || |||||| ||||||||||| |||||||| || ||||||||
Sbjct: 554 gcaggaccttccttaacaagaagggcaagaaggtgagcaaggctcccaagatcca 608
>gb|CA009270.1|CA009270 HU13K15r HU Hordeum vulgare subsp. vulgare cDNA clone HU13K15
5-PRIME, mRNA sequence
Length = 639
Score = 545 bits (275), Expect = e-153
Identities = 515/595 (86%)
Strand = Plus / Plus
Query: 42 ccacccagcgctcgagctcctcgctccctgcgagcgcgcgccgcaacgccaccatgaagt 101
|||||||||| ||| | | ||||| || |||||| || |||||||| |||||||||||
Sbjct: 41 ccacccagcgttcgggttgctcgccgccggcgagctcgtgccgcaactccaccatgaagc 100
Query: 102 tcaacatcgcgaacccttccaccgggtgccaaaagaagctggaaatcgatgacgaccaga 161
| |||||||||||||| |||| |||||||| |||||| | || ||||||||||||||||
Sbjct: 101 tgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgacgaccaga 160
Query: 162 agctgcgtgccttttatgaccgaaggatatcccaggaggtcagtggtgatgctctgggtg 221
||||||| | |||||||| || || ||||||||||| ||||||| ||||||||
Sbjct: 161 agctgcggaacctttatgacaagagaatctcccaggaggtagttggtgatcttctgggtg 220
Query: 222 aggagttcaagggttatgtcttcaagatcatgggtggatgtgacaagcaaggcttcccaa 281
|||| |||||||||||| ||||||||||||||||||| ||||| ||||| |||||||| |
Sbjct: 221 aggaattcaagggttatatcttcaagatcatgggtggctgtgataagcagggcttcccga 280
Query: 282 tgaagcaaggagttttgacttctggtcgtgttcgtcttctgctccataggggcactccct 341
||||||||||||| | |||||||| ||||| || |||||||| || |||||||| || |
Sbjct: 281 tgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacaggggcacacctt 340
Query: 342 gcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtctgtccgtggttgca 401
|||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 341 gcttccgtggttttggcaggcgtaatggtgagcgcaggagaaagtccgtccgtggttgca 400
Query: 402 tcgtgagccaagacctatctgttatcaacttggtgattgtgaagaagggtgagaatgatc 461
| || ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 401 ttgtcagccaagacctgtctgttatcaacttggtgattgtcaagaagggtgagaatgatc 460
Query: 462 tgcctggtctgactgacactgagaagccaaggatgaggggtcccaagagggcctccaaga 521
|||| || || ||||||||||||||||| ||||||||||| ||||||||||| |||||||
Sbjct: 461 tgccaggccttactgacactgagaagcccaggatgaggggacccaagagggcttccaaga 520
Query: 522 tcagaaagctgttcaaccttaacaaggatgatgatgtacgcaagtacgtgaacacatacc 581
||| ||||| ||||||||| ||||||||||||||| |||| || || ||||||||||
Sbjct: 521 tcaagaagctcttcaaccttggcaaggatgatgatgtccgcagctatgtcaacacatacc 580
Query: 582 gcaggacattcactaccaagaacggcaagaaggtcagcaaggcacctaagatcca 636
||||||| ||| || |||||| ||||||||||| |||||||| || ||||||||
Sbjct: 581 gcaggaccttccttaacaagaagggcaagaaggtgagcaaggctcccaagatcca 635
>gb|BQ464244.1|BQ464244 HF01L20T HF Hordeum vulgare subsp. vulgare cDNA clone HF01L20
5-PRIME, mRNA sequence
Length = 680
Score = 539 bits (272), Expect = e-152
Identities = 451/510 (88%), Gaps = 3/510 (0%)
Strand = Plus / Plus
Query: 348 gtggttatggcaggcgtaatggtgagcgcaggaggaagtctgtccgtggttgcatcgtga 407
|||||| ||||||||||||||||||||||||||| ||||| |||||||||||||| || |
Sbjct: 11 gtggttttggcaggcgtaatggtgagcgcaggagaaagtccgtccgtggttgcattgtca 70
Query: 408 gccaagacctatctgttatcaacttggtgattgtgaagaagggtgagaatgatctgcctg 467
|||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct: 71 gccaagacctgtctgttatcaacttggtgattgtcaagaagggtgagaatgatctgccag 130
Query: 468 gtctgactgacactgagaagccaaggatgaggggtcccaagagggcctccaagatcagaa 527
| || ||||||||||||||||| ||||||||||| ||||||||||| |||||||||| |
Sbjct: 131 gccttactgacactgagaagcccaggatgaggggacccaagagggcttccaagatcaaga 190
Query: 528 agctgttcaaccttaacaaggatgatgatgtacgcaagtacgtgaacacataccgcagga 587
|||| ||||||||| ||||||||||||||| |||| || || ||||||||||||||||
Sbjct: 191 agctcttcaaccttggcaaggatgatgatgtccgcagctatgtcaacacataccgcagga 250
Query: 588 cattcactaccaagaacggcaagaaggtcagcaaggcacctaagatccaacggcttgtga 647
| ||| || |||||| ||||||||||| |||||||| || |||||||| || |||||||
Sbjct: 251 ccttccttaacaagaagggcaagaaggtgagcaaggctcccaagatccagcgtcttgtga 310
Query: 648 cacccttgaccctccagaggaagcgtgctagaatcgctgacaagaagaagaggataacta 707
| |||||||||||||||||||||||||| |||||||||||||||||||||||||| | |
Sbjct: 311 ctcccttgaccctccagaggaagcgtgccagaatcgctgacaagaagaagaggatcgcca 370
Query: 708 agaagaagtctgaggctgctgagtaccagaagcttcttgcccagaggctgaaggaacaga 767
|||||||||| |||||||| |||||||||||||| ||||| || ||||||||||| ||||
Sbjct: 371 agaagaagtcagaggctgcagagtaccagaagctgcttgcgcaaaggctgaaggagcaga 430
Query: 768 gggaccgccggagcgagagcttggccaagaggaggtccaagctttctgccgccgccaagg 827
| |||||||| || |||||| |||||||||||||||| ||||| ||||| || | ||||
Sbjct: 431 gagaccgccgcagtgagagcatggccaagaggaggtcaaagctgtctgctgctacaaagg 490
Query: 828 cttctgctgccacctctgcttaagaatgtt 857
|| |||||| ||||||||||||| ||||
Sbjct: 491 ctcctgctg---cctctgcttaagattgtt 517
>gb|BM377175.2|BM377175 EBem05_SQ004_F13_R embryo, 14 DPA, no treatment, cv Optic, EBem05
Hordeum vulgare subsp. vulgare cDNA clone
EBem05_SQ004_F13 5', mRNA sequence
Length = 635
Score = 539 bits (272), Expect = e-152
Identities = 512/592 (86%)
Strand = Plus / Plus
Query: 42 ccacccagcgctcgagctcctcgctccctgcgagcgcgcgccgcaacgccaccatgaagt 101
|||||||||| ||| | | ||||| || |||||| || |||||||| |||||||||||
Sbjct: 44 ccacccagcgttcgggttgctcgccgccggcgagctcgtgccgcaactccaccatgaagc 103
Query: 102 tcaacatcgcgaacccttccaccgggtgccaaaagaagctggaaatcgatgacgaccaga 161
| |||||||||||||| |||| |||||||| |||||| | || ||||||||||||||||
Sbjct: 104 tgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgacgaccaga 163
Query: 162 agctgcgtgccttttatgaccgaaggatatcccaggaggtcagtggtgatgctctgggtg 221
||||||| | |||||||| || || ||||||||||| ||||||| ||||||||
Sbjct: 164 agctgcggaacctttatgacaagagaatctcccaggaggtagttggtgatcttctgggtg 223
Query: 222 aggagttcaagggttatgtcttcaagatcatgggtggatgtgacaagcaaggcttcccaa 281
|||| |||||||||||| ||||||||||||||||||| ||||| ||||| |||||||| |
Sbjct: 224 aggaattcaagggttatatcttcaagatcatgggtggctgtgataagcagggcttcccga 283
Query: 282 tgaagcaaggagttttgacttctggtcgtgttcgtcttctgctccataggggcactccct 341
||||||||||||| | |||||||| ||||| || |||||||| || |||||||| || |
Sbjct: 284 tgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacaggggcacacctt 343
Query: 342 gcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtctgtccgtggttgca 401
|||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 344 gcttccgtggttttggcaggcgtaatggtgagcgcaggagaaagtccgtccgtggttgca 403
Query: 402 tcgtgagccaagacctatctgttatcaacttggtgattgtgaagaagggtgagaatgatc 461
| || ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 404 ttgtcagccaagacctgtctgttatcaacttggtgattgtcaagaagggtgagaatgatc 463
Query: 462 tgcctggtctgactgacactgagaagccaaggatgaggggtcccaagagggcctccaaga 521
|||| || || ||||||||||||||||| ||||||||||| ||||||||||| |||||||
Sbjct: 464 tgccaggccttactgacactgagaagcccaggatgaggggacccaagagggcttccaaga 523
Query: 522 tcagaaagctgttcaaccttaacaaggatgatgatgtacgcaagtacgtgaacacatacc 581
||| ||||| ||||||||| ||||||||||||||| |||| || || ||||||||||
Sbjct: 524 tcaagaagctcttcaaccttggcaaggatgatgatgtccgcagctatgtcaacacatacc 583
Query: 582 gcaggacattcactaccaagaacggcaagaaggtcagcaaggcacctaagat 633
||||||| ||| || |||||| ||||||||||| |||||||| || |||||
Sbjct: 584 gcaggaccttccttaacaagaagggcaagaaggtgagcaaggctcccaagat 635
>gb|BU987888.1|BU987888 HF16A20r HF Hordeum vulgare subsp. vulgare cDNA clone HF16A20
5-PRIME, mRNA sequence
Length = 571
Score = 533 bits (269), Expect = e-150
Identities = 485/557 (87%)
Strand = Plus / Plus
Query: 92 accatgaagttcaacatcgcgaacccttccaccgggtgccaaaagaagctggaaatcgat 151
||||||||| | |||||||||||||| |||| |||||||| |||||| | || ||||||
Sbjct: 11 accatgaagctgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgat 70
Query: 152 gacgaccagaagctgcgtgccttttatgaccgaaggatatcccaggaggtcagtggtgat 211
||||||||||||||||| | |||||||| || || ||||||||||| |||||||
Sbjct: 71 gacgaccagaagctgcggaacctttatgacaagagaatctcccaggaggtagttggtgat 130
Query: 212 gctctgggtgaggagttcaagggttatgtcttcaagatcatgggtggatgtgacaagcaa 271
|||||||||||| |||||||||||| ||||||||||||||||||| ||||| |||||
Sbjct: 131 cttctgggtgaggaattcaagggttatatcttcaagatcatgggtggctgtgataagcag 190
Query: 272 ggcttcccaatgaagcaaggagttttgacttctggtcgtgttcgtcttctgctccatagg 331
|||||||| |||||||||||||| | |||||||| ||||| || |||||||| || |||
Sbjct: 191 ggcttcccgatgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacagg 250
Query: 332 ggcactccctgcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtctgtc 391
||||| || ||||||||||||| ||||||||||||||||||||||||||| ||||| |||
Sbjct: 251 ggcacaccttgcttccgtggttttggcaggcgtaatggtgagcgcaggagaaagtccgtc 310
Query: 392 cgtggttgcatcgtgagccaagacctatctgttatcaacttggtgattgtgaagaagggt 451
||||||||||| || ||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 311 cgtggttgcattgtcagccaagacctgtctgttatcaacttggtgattgtcaagaagggt 370
Query: 452 gagaatgatctgcctggtctgactgacactgagaagccaaggatgaggggtcccaagagg 511
|||||||||||||| || || ||||||||||||||||| ||||||||||| |||||||||
Sbjct: 371 gagaatgatctgccaggccttactgacactgagaagcccaggatgaggggacccaagagg 430
Query: 512 gcctccaagatcagaaagctgttcaaccttaacaaggatgatgatgtacgcaagtacgtg 571
|| |||||||||| ||||| ||||||||| ||||||||||||||| |||| || ||
Sbjct: 431 gcttccaagatcaagaagctcttcaaccttggcaaggatgatgatgtccgcagctatgtc 490
Query: 572 aacacataccgcaggacattcactaccaagaacggcaagaaggtcagcaaggcacctaag 631
||||||||||||||||| ||| || |||||| ||||||||||| |||||||| || |||
Sbjct: 491 aacacataccgcaggaccttccttaacaagaagggcaagaaggtgagcaaggctcccaag 550
Query: 632 atccaacggcttgtgac 648
||||| || ||||||||
Sbjct: 551 atccagcgtcttgtgac 567
>gb|BU990667.1|BU990667 HF25L12r HF Hordeum vulgare subsp. vulgare cDNA clone HF25L12
5-PRIME, mRNA sequence
Length = 626
Score = 531 bits (268), Expect = e-149
Identities = 444/502 (88%), Gaps = 3/502 (0%)
Strand = Plus / Plus
Query: 356 ggcaggcgtaatggtgagcgcaggaggaagtctgtccgtggttgcatcgtgagccaagac 415
|||||||||||||||||||||||||| ||||| |||||||||||||| || |||||||||
Sbjct: 1 ggcaggcgtaatggtgagcgcaggagaaagtccgtccgtggttgcattgtcagccaagac 60
Query: 416 ctatctgttatcaacttggtgattgtgaagaagggtgagaatgatctgcctggtctgact 475
|| ||||||||||||||||||||||| ||||||||||||||||||||||| || || |||
Sbjct: 61 ctgtctgttatcaacttggtgattgtcaagaagggtgagaatgatctgccaggccttact 120
Query: 476 gacactgagaagccaaggatgaggggtcccaagagggcctccaagatcagaaagctgttc 535
|||||||||||||| ||||||||||| ||||||||||| |||||||||| ||||| |||
Sbjct: 121 gacactgagaagcccaggatgaggggacccaagagggcttccaagatcaagaagctcttc 180
Query: 536 aaccttaacaaggatgatgatgtacgcaagtacgtgaacacataccgcaggacattcact 595
|||||| ||||||||||||||| |||| || || ||||||||||||||||| ||| |
Sbjct: 181 aaccttggcaaggatgatgatgtccgcagctatgtcaacacataccgcaggaccttcctt 240
Query: 596 accaagaacggcaagaaggtcagcaaggcacctaagatccaacggcttgtgacacccttg 655
| |||||| ||||||||||| |||||||| || |||||||| || |||||||| ||||||
Sbjct: 241 aacaagaagggcaagaaggtgagcaaggctcccaagatccagcgtcttgtgactcccttg 300
Query: 656 accctccagaggaagcgtgctagaatcgctgacaagaagaagaggataactaagaagaag 715
|||||||||||||||||||| |||||||||||||||||||||||||| | |||||||||
Sbjct: 301 accctccagaggaagcgtgccagaatcgctgacaagaagaagaggatcgccaagaagaag 360
Query: 716 tctgaggctgctgagtaccagaagcttcttgcccagaggctgaaggaacagagggaccgc 775
|| |||||||| |||||||||||||| ||||| || ||||||||||| ||||| ||||||
Sbjct: 361 tcagaggctgcagagtaccagaagctgcttgcgcaaaggctgaaggagcagagagaccgc 420
Query: 776 cggagcgagagcttggccaagaggaggtccaagctttctgccgccgccaaggcttctgct 835
|| || |||||| |||||||||||||||| ||||| ||||| || | |||||| |||||
Sbjct: 421 cgcagtgagagcatggccaagaggaggtcaaagctgtctgctgctacaaaggctcctgct 480
Query: 836 gccacctctgcttaagaatgtt 857
| ||||||||||||| ||||
Sbjct: 481 g---cctctgcttaagattgtt 499
>gb|BU984897.1|BU984897 HF05G24r HF Hordeum vulgare subsp. vulgare cDNA clone HF05G24
5-PRIME, mRNA sequence
Length = 627
Score = 527 bits (266), Expect = e-148
Identities = 422/474 (89%)
Strand = Plus / Plus
Query: 356 ggcaggcgtaatggtgagcgcaggaggaagtctgtccgtggttgcatcgtgagccaagac 415
|||||||||||||||||||||||||| ||||| |||||||||||||| || |||||||||
Sbjct: 1 ggcaggcgtaatggtgagcgcaggagaaagtccgtccgtggttgcattgtcagccaagac 60
Query: 416 ctatctgttatcaacttggtgattgtgaagaagggtgagaatgatctgcctggtctgact 475
|| ||||||||||||||||||||||| |||||||||||||||||||| || || || |||
Sbjct: 61 ctgtctgttatcaacttggtgattgtcaagaagggtgagaatgatctaccaggccttact 120
Query: 476 gacactgagaagccaaggatgaggggtcccaagagggcctccaagatcagaaagctgttc 535
|||||||||||||| ||||||||||| ||||||||||| |||||||||| ||||| |||
Sbjct: 121 gacactgagaagcccaggatgaggggacccaagagggcttccaagatcaagaagctcttc 180
Query: 536 aaccttaacaaggatgatgatgtacgcaagtacgtgaacacataccgcaggacattcact 595
|||||| ||||||||||||||| |||| || || ||||||||||||||||| ||| |
Sbjct: 181 aaccttggcaaggatgatgatgtccgcagctatgtcaacacataccgcaggaccttcctt 240
Query: 596 accaagaacggcaagaaggtcagcaaggcacctaagatccaacggcttgtgacacccttg 655
| |||||| || |||||||| |||||||| || |||||||| || |||||||| ||||||
Sbjct: 241 aacaagaagggaaagaaggtgagcaaggcccccaagatccagcgtcttgtgactcccttg 300
Query: 656 accctccagaggaagcgtgctagaatcgctgacaagaagaagaggataactaagaagaag 715
|||||||||||||||||||| |||||||| ||||||||||||||||| | |||||||||
Sbjct: 301 accctccagaggaagcgtgccagaatcgccgacaagaagaagaggatcgccaagaagaag 360
Query: 716 tctgaggctgctgagtaccagaagcttcttgcccagaggctgaaggaacagagggaccgc 775
|| |||||||| |||||||||||||| ||||| |||||||||||||| |||||||| |||
Sbjct: 361 tcagaggctgcagagtaccagaagctgcttgcacagaggctgaaggagcagagggatcgc 420
Query: 776 cggagcgagagcttggccaagaggaggtccaagctttctgccgccgccaaggct 829
||||| |||||| |||||||||||||||| ||||| ||||| ||| ||||||||
Sbjct: 421 cggagtgagagcatggccaagaggaggtcgaagctgtctgctgccaccaaggct 474
>gb|AL508299.1|AL508299 AL508299 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY08F17V 5',
mRNA sequence
Length = 700
Score = 519 bits (262), Expect = e-146
Identities = 528/614 (85%), Gaps = 2/614 (0%)
Strand = Plus / Plus
Query: 91 caccatgaagttcaacatcgcgaacccttccaccgggtgccaaaagaagctggaaatcga 150
|||||||||||| |||||||||||||| |||| |||||||| |||||| |||| |||||
Sbjct: 73 caccatgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtggagatcga 132
Query: 151 tgacgaccagaagctgcgtgccttttatgaccgaaggatatcccaggaggtcagtggtga 210
|||||||||||||||||| | |||||||| || || ||||||||||| ||||||
Sbjct: 133 tgacgaccagaagctgcgaaacctttatgacaagagaatctcccaggaggtagttggtga 192
Query: 211 tgctctgggtgaggagttcaagggttatgtcttcaagatcatgggtggatgtgacaagca 270
| |||||||||||| ||| |||| ||| ||||||||||||||||||| || || |||||
Sbjct: 193 tcttctgggtgaggaattcgagggctatatcttcaagatcatgggtggctgcgataagca 252
Query: 271 aggcttcccaatgaagcaaggagttttgacttctggtcgtgttcgtcttctgctccatag 330
||||||||||||||||||||||| | ||| |||| || ||||| |||||||| || ||
Sbjct: 253 gggcttcccaatgaagcaaggagtgctaactcctgggcgcgttcgccttctgcttcacag 312
Query: 331 gggcactccctgcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtctgt 390
|||||| | ||||| ||||| ||||||||||| |||||||||| |||||||||||||
Sbjct: 313 gggcacatcttgctttcgtggacatggcaggcgtgttggtgagcgccggaggaagtctgt 372
Query: 391 ccgtggttgcatcgtgagccaagacctatctgttatcaacttggtgattgtgaagaaggg 450
||||||||||| || |||||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 373 tcgtggttgcattgtcagccaagatctatctgttatcaacttggtgattgtcaagaaggg 432
Query: 451 tgagaatgatctgcctggtctgactgacactgagaagccaaggatgaggggtcccaagag 510
||||||||||||| || |||||||||||||||||||| ||||||||||| ||||| ||
Sbjct: 433 caagaatgatctgccaggcctgactgacactgagaagcccaggatgaggggacccaaaag 492
Query: 511 ggcctccaagatcagaaagctgttcaaccttaacaaggatgatgatgtacgcaagtacgt 570
||| |||||||||| ||||| ||||||||| ||||||||||||||| ||| |||| ||
Sbjct: 493 ggcttccaagatcaagaagctcttcaaccttggcaaggatgatgatgtccgccagtatgt 552
Query: 571 gaacacataccgcaggacattcactaccaagaacggcaagaaggtcagcaaggcacctaa 630
||||||||||||||| | ||||| | |||||| ||||||| || |||||||| || ||
Sbjct: 553 caacacataccgcaggtccttcacgaacaagaagggcaagaccgtgagcaaggctcccaa 612
Query: 631 gatccaacggcttgtgacacccttgacc-ctccagaggaagcgtgctagaatcgctgac- 688
|||||| || |||||||||||||||||| |||||||||||||||| |||||||| |||
Sbjct: 613 gatccagcgtcttgtgacacccttgaccattccagaggaagcgtgccagaatcgccgaca 672
Query: 689 aagaagaagaggat 702
||||||||||||||
Sbjct: 673 aagaagaagaggat 686
>gb|BU999099.1|BU999099 HI13D24r HI Hordeum vulgare subsp. vulgare cDNA clone HI13D24
5-PRIME, mRNA sequence
Length = 615
Score = 515 bits (260), Expect = e-145
Identities = 509/592 (85%)
Strand = Plus / Plus
Query: 91 caccatgaagttcaacatcgcgaacccttccaccgggtgccaaaagaagctggaaatcga 150
|||||||||||| |||||||||||||| |||| |||||||| |||||| |||| |||||
Sbjct: 24 caccatgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtggagatcga 83
Query: 151 tgacgaccagaagctgcgtgccttttatgaccgaaggatatcccaggaggtcagtggtga 210
|||||||||||||||||| | |||||||| || || ||||||||||| ||||||
Sbjct: 84 tgacgaccagaagctgcgaaacctttatgacaagagaatctcccaggaggtagttggtga 143
Query: 211 tgctctgggtgaggagttcaagggttatgtcttcaagatcatgggtggatgtgacaagca 270
| |||||||||||| ||| |||| ||| ||||||||||||||||||| || || |||||
Sbjct: 144 tcttctgggtgaggaattcgagggctatatcttcaagatcatgggtggctgcgataagca 203
Query: 271 aggcttcccaatgaagcaaggagttttgacttctggtcgtgttcgtcttctgctccatag 330
||||||||||||||||||||||| | ||| |||| || ||||| |||||||| || ||
Sbjct: 204 gggcttcccaatgaagcaaggagtgctaactcctgggcgcgttcgccttctgcttcacag 263
Query: 331 gggcactccctgcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtctgt 390
|||||| | ||||| ||||| ||||||||||| |||||||||| |||||||||||||
Sbjct: 264 gggcacatcttgctttcgtggacatggcaggcgtgttggtgagcgccggaggaagtctgt 323
Query: 391 ccgtggttgcatcgtgagccaagacctatctgttatcaacttggtgattgtgaagaaggg 450
||||||||||| || |||||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 324 tcgtggttgcattgtcagccaagatctatctgttatcaacttggtgattgtcaagaaggg 383
Query: 451 tgagaatgatctgcctggtctgactgacactgagaagccaaggatgaggggtcccaagag 510
||||||||||||| || |||||||||||||||||||| ||||||||||| ||||| ||
Sbjct: 384 caagaatgatctgccaggcctgactgacactgagaagcccaggatgaggggacccaaaag 443
Query: 511 ggcctccaagatcagaaagctgttcaaccttaacaaggatgatgatgtacgcaagtacgt 570
||| |||||||||| ||||| ||||||||| ||||||||||||||| ||| |||| ||
Sbjct: 444 ggcttccaagatcaagaagctcttcaaccttggcaaggatgatgatgtccgccagtatgt 503
Query: 571 gaacacataccgcaggacattcactaccaagaacggcaagaaggtcagcaaggcacctaa 630
||||||||||||||| | ||||| | |||||| ||||||| || |||||||| || ||
Sbjct: 504 caacacataccgcaggtccttcacgaacaagaagggcaagaccgtgagcaaggctcccaa 563
Query: 631 gatccaacggcttgtgacacccttgaccctccagaggaagcgtgctagaatc 682
|||||| || |||||||||||||||||| |||||||||||||||| ||||||
Sbjct: 564 gatccagcgtcttgtgacacccttgaccatccagaggaagcgtgccagaatc 615
>gb|BU981060.1|BU981060 HA22I10r HA Hordeum vulgare subsp. vulgare cDNA clone HA22I10
5-PRIME, mRNA sequence
Length = 613
Score = 513 bits (259), Expect = e-144
Identities = 475/547 (86%)
Strand = Plus / Plus
Query: 42 ccacccagcgctcgagctcctcgctccctgcgagcgcgcgccgcaacgccaccatgaagt 101
|||||||||| ||| | | ||||| || |||||| || |||||||| |||||||||||
Sbjct: 49 ccacccagcgttcgggttgctcgccgccggcgagctcgtgccgcaactccaccatgaagc 108
Query: 102 tcaacatcgcgaacccttccaccgggtgccaaaagaagctggaaatcgatgacgaccaga 161
| |||||||||||||| |||| |||||||| |||||| | || ||||||||||||||||
Sbjct: 109 tgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgacgaccaga 168
Query: 162 agctgcgtgccttttatgaccgaaggatatcccaggaggtcagtggtgatgctctgggtg 221
||||||| | |||||||| || || ||||||||||| ||||||| ||||||||
Sbjct: 169 agctgcggaacctttatgacaagagaatctcccaggaggtagttggtgatcttctgggtg 228
Query: 222 aggagttcaagggttatgtcttcaagatcatgggtggatgtgacaagcaaggcttcccaa 281
|||| |||||||||||| ||||||||||||||||||| ||||| ||||| |||||||| |
Sbjct: 229 aggaattcaagggttatatcttcaagatcatgggtggctgtgataagcagggcttcccga 288
Query: 282 tgaagcaaggagttttgacttctggtcgtgttcgtcttctgctccataggggcactccct 341
||||||||||||| | |||||||| ||||| || |||||||| || |||||||| || |
Sbjct: 289 tgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacaggggcacacctt 348
Query: 342 gcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtctgtccgtggttgca 401
|||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 349 gcttccgtggttttggcaggcgtaatggtgagcgcaggagaaagtccgtccgtggttgca 408
Query: 402 tcgtgagccaagacctatctgttatcaacttggtgattgtgaagaagggtgagaatgatc 461
| || ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 409 ttgtcagccaagacctgtctgttatcaacttggtgattgtcaagaagggtgagaatgatc 468
Query: 462 tgcctggtctgactgacactgagaagccaaggatgaggggtcccaagagggcctccaaga 521
|||| || || ||||||||||||||||| ||||||||||| ||||||||||| |||||||
Sbjct: 469 tgccaggccttactgacactgagaagcccaggatgaggggacccaagagggcttccaaga 528
Query: 522 tcagaaagctgttcaaccttaacaaggatgatgatgtacgcaagtacgtgaacacatacc 581
||| ||||| ||||||||| ||||||||||||||| |||| || || ||||||||||
Sbjct: 529 tcaagaagctcttcaaccttggcaaggatgatgatgtccgcagctatgtcaacacatacc 588
Query: 582 gcaggac 588
|||||||
Sbjct: 589 gcaggac 595
>gb|BU982876.1|BU982876 HA27N24r HA Hordeum vulgare subsp. vulgare cDNA clone HA27N24
5-PRIME, mRNA sequence
Length = 605
Score = 513 bits (259), Expect = e-144
Identities = 475/547 (86%)
Strand = Plus / Plus
Query: 42 ccacccagcgctcgagctcctcgctccctgcgagcgcgcgccgcaacgccaccatgaagt 101
|||||||||| ||| | | ||||| || |||||| || |||||||| |||||||||||
Sbjct: 40 ccacccagcgttcgggttgctcgccgccggcgagctcgtgccgcaactccaccatgaagc 99
Query: 102 tcaacatcgcgaacccttccaccgggtgccaaaagaagctggaaatcgatgacgaccaga 161
| |||||||||||||| |||| |||||||| |||||| | || ||||||||||||||||
Sbjct: 100 tgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgacgaccaga 159
Query: 162 agctgcgtgccttttatgaccgaaggatatcccaggaggtcagtggtgatgctctgggtg 221
||||||| | |||||||| || || ||||||||||| ||||||| ||||||||
Sbjct: 160 agctgcggaacctttatgacaagagaatctcccaggaggtagttggtgatcttctgggtg 219
Query: 222 aggagttcaagggttatgtcttcaagatcatgggtggatgtgacaagcaaggcttcccaa 281
|||| |||||||||||| ||||||||||||||||||| ||||| ||||| |||||||| |
Sbjct: 220 aggaattcaagggttatatcttcaagatcatgggtggctgtgataagcagggcttcccga 279
Query: 282 tgaagcaaggagttttgacttctggtcgtgttcgtcttctgctccataggggcactccct 341
||||||||||||| | |||||||| ||||| || |||||||| || |||||||| || |
Sbjct: 280 tgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacaggggcacacctt 339
Query: 342 gcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtctgtccgtggttgca 401
|||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 340 gcttccgtggttttggcaggcgtaatggtgagcgcaggagaaagtccgtccgtggttgca 399
Query: 402 tcgtgagccaagacctatctgttatcaacttggtgattgtgaagaagggtgagaatgatc 461
| || ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 400 ttgtcagccaagacctgtctgttatcaacttggtgattgtcaagaagggtgagaatgatc 459
Query: 462 tgcctggtctgactgacactgagaagccaaggatgaggggtcccaagagggcctccaaga 521
|||| || || ||||||||||||||||| ||||||||||| ||||||||||| |||||||
Sbjct: 460 tgccaggccttactgacactgagaagcccaggatgaggggacccaagagggcttccaaga 519
Query: 522 tcagaaagctgttcaaccttaacaaggatgatgatgtacgcaagtacgtgaacacatacc 581
||| ||||| ||||||||| ||||||||||||||| |||| || || ||||||||||
Sbjct: 520 tcaagaagctcttcaaccttggcaaggatgatgatgtccgcagctatgtcaacacatacc 579
Query: 582 gcaggac 588
|||||||
Sbjct: 580 gcaggac 586
>gb|BJ549487.1|BJ549487 BJ549487 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags37n19 5', mRNA sequence
Length = 613
Score = 513 bits (259), Expect = e-144
Identities = 421/475 (88%)
Strand = Plus / Plus
Query: 355 tggcaggcgtaatggtgagcgcaggaggaagtctgtccgtggttgcatcgtgagccaaga 414
||||||||||||||||||||||||||| ||||| |||||||||||||| || ||||||||
Sbjct: 4 tggcaggcgtaatggtgagcgcaggagaaagtccgtccgtggttgcattgtcagccaaga 63
Query: 415 cctatctgttatcaacttggtgattgtgaagaagggtgagaatgatctgcctggtctgac 474
||| ||||||||||||||||||||||| |||||||||||||||||||| || || || ||
Sbjct: 64 cctgtctgttatcaacttggtgattgtcaagaagggtgagaatgatctaccaggccttac 123
Query: 475 tgacactgagaagccaaggatgaggggtcccaagagggcctccaagatcagaaagctgtt 534
||||||||||||||| ||||||||||| ||||||||||| || ||||||| ||||| ||
Sbjct: 124 tgacactgagaagcccaggatgaggggacccaagagggcttcgaagatcaagaagctttt 183
Query: 535 caaccttaacaaggatgatgatgtacgcaagtacgtgaacacataccgcaggacattcac 594
||||||| ||||||||||||||| |||| || || ||||||||||||||||| |||
Sbjct: 184 caaccttggcaaggatgatgatgtccgcagctatgtcaacacataccgcaggaccttcct 243
Query: 595 taccaagaacggcaagaaggtcagcaaggcacctaagatccaacggcttgtgacaccctt 654
|| |||||| || |||||||| |||||||| || |||||||| || |||||||| |||||
Sbjct: 244 taacaagaagggaaagaaggtgagcaaggcccccaagatccagcgtcttgtgactccctt 303
Query: 655 gaccctccagaggaagcgtgctagaatcgctgacaagaagaagaggataactaagaagaa 714
||||||||||||||||||||| ||||| || ||||||||||||||||| | ||||||||
Sbjct: 304 gaccctccagaggaagcgtgccagaattgccgacaagaagaagaggatcgccaagaagaa 363
Query: 715 gtctgaggctgctgagtaccagaagcttcttgcccagaggctgaaggaacagagggaccg 774
||| |||||||| |||||||||||||| ||||| |||||||||||||| |||||||| ||
Sbjct: 364 gtcagaggctgcagagtaccagaagctgcttgcacagaggctgaaggagcagagggatcg 423
Query: 775 ccggagcgagagcttggccaagaggaggtccaagctttctgccgccgccaaggct 829
|||||| |||||| |||||||||||||||| ||||| ||||| ||| ||||||||
Sbjct: 424 ccggagtgagagcatggccaagaggaggtcgaagctgtctgctgccaccaaggct 478
>gb|CB882245.1|CB882245 HL01F05w HL Hordeum vulgare subsp. vulgare cDNA clone HL01F05
3-PRIME, mRNA sequence
Length = 583
Score = 513 bits (259), Expect = e-144
Identities = 475/547 (86%)
Strand = Plus / Plus
Query: 42 ccacccagcgctcgagctcctcgctccctgcgagcgcgcgccgcaacgccaccatgaagt 101
|||||||||| ||| | | ||||| || |||||| || |||||||| |||||||||||
Sbjct: 37 ccacccagcgttcgggttgctcgccgccggcgagctcgtgccgcaactccaccatgaagc 96
Query: 102 tcaacatcgcgaacccttccaccgggtgccaaaagaagctggaaatcgatgacgaccaga 161
| |||||||||||||| |||| |||||||| |||||| | || ||||||||||||||||
Sbjct: 97 tgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgacgaccaga 156
Query: 162 agctgcgtgccttttatgaccgaaggatatcccaggaggtcagtggtgatgctctgggtg 221
||||||| | |||||||| || || ||||||||||| ||||||| ||||||||
Sbjct: 157 agctgcggaacctttatgacaagagaatctcccaggaggtagttggtgatcttctgggtg 216
Query: 222 aggagttcaagggttatgtcttcaagatcatgggtggatgtgacaagcaaggcttcccaa 281
|||| |||||||||||| ||||||||||||||||||| ||||| ||||| |||||||| |
Sbjct: 217 aggaattcaagggttatatcttcaagatcatgggtggctgtgataagcagggcttcccga 276
Query: 282 tgaagcaaggagttttgacttctggtcgtgttcgtcttctgctccataggggcactccct 341
||||||||||||| | |||||||| ||||| || |||||||| || |||||||| || |
Sbjct: 277 tgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacaggggcacacctt 336
Query: 342 gcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtctgtccgtggttgca 401
|||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 337 gcttccgtggttttggcaggcgtaatggtgagcgcaggagaaagtccgtccgtggttgca 396
Query: 402 tcgtgagccaagacctatctgttatcaacttggtgattgtgaagaagggtgagaatgatc 461
| || ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 397 ttgtcagccaagacctgtctgttatcaacttggtgattgtcaagaagggtgagaatgatc 456
Query: 462 tgcctggtctgactgacactgagaagccaaggatgaggggtcccaagagggcctccaaga 521
|||| || || ||||||||||||||||| ||||||||||| ||||||||||| |||||||
Sbjct: 457 tgccaggccttactgacactgagaagcccaggatgaggggacccaagagggcttccaaga 516
Query: 522 tcagaaagctgttcaaccttaacaaggatgatgatgtacgcaagtacgtgaacacatacc 581
||| ||||| ||||||||| ||||||||||||||| |||| || || ||||||||||
Sbjct: 517 tcaagaagctcttcaaccttggcaaggatgatgatgtccgcagctatgtcaacacatacc 576
Query: 582 gcaggac 588
|||||||
Sbjct: 577 gcaggac 583
>gb|AL506899.1|AL506899 AL506899 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY04J06T 5',
mRNA sequence
Length = 687
Score = 509 bits (257), Expect = e-143
Identities = 525/612 (85%), Gaps = 2/612 (0%)
Strand = Plus / Plus
Query: 91 caccatgaagttcaacatcgcgaacccttccaccgggtgccaaaagaagctggaaatcga 150
|||||||||||| |||||||||||||| |||| |||||||| |||||| |||| |||||
Sbjct: 76 caccatgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtggagatcga 135
Query: 151 tgacgaccagaagctgcgtgccttttatgaccgaaggatatcccaggaggtcagtggtga 210
|||||||||||||||||| | |||||||| || || ||||||||||| ||||||
Sbjct: 136 tgacgaccagaagctgcgaaacctttatgacaagagaatctcccaggaggtagttggtga 195
Query: 211 tgctctgggtgaggagttcaagggttatgtcttcaagatcatgggtggatgtgacaagca 270
| |||||||||||| ||| |||| ||| ||||||||||||||||||| || || |||||
Sbjct: 196 tcttctgggtgaggaattcgagggctatatcttcaagatcatgggtggctgcgataagca 255
Query: 271 aggcttcccaatgaagcaaggagttttgacttctggtcgtgttcgtcttctgctccatag 330
||||||||||||||||||||||| | ||| |||| || ||||| |||||||| || ||
Sbjct: 256 gggcttcccaatgaagcaaggagtgctaactcctgggcgcgttcgccttctgcttcacag 315
Query: 331 gggcactccctgcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtctgt 390
|||||| | ||||| ||||| ||||||||||| |||||||||| |||||||||||||
Sbjct: 316 gggcacatcttgctttcgtggacatggcaggcgtgttggtgagcgccggaggaagtctgt 375
Query: 391 ccgtggttgcatcgtgagccaagacctatctgttatcaacttggtgattgtgaagaaggg 450
||||||||||| || |||||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 376 tcgtggttgcattgtcagccaagatctatctgttatcaacttggtgattgtcaagaaggg 435
Query: 451 tgagaatgatctgcctggtctgactgacactgagaagccaaggatgaggggtcccaagag 510
||||||||||||| || |||||||||||||||||||| ||||||||||| ||||| ||
Sbjct: 436 caagaatgatctgccaggcctgactgacactgagaagcccaggatgaggggacccaaaag 495
Query: 511 ggcctccaagatcagaaagctgttcaaccttaacaaggatgatgatgtacgcaagtacgt 570
||| |||||||||| ||||| ||||||||| ||||||||||||||| ||| |||| ||
Sbjct: 496 ggcttccaagatcaagaagctcttcaaccttggcaaggatgatgatgtccgccagtatgt 555
Query: 571 gaacacataccgcaggacattcactaccaagaacggcaagaaggtcagcaaggcacctaa 630
||||||||||||||| | ||||| | |||||| ||||||| || |||||||| || ||
Sbjct: 556 caacacataccgcaggtccttcacgaacaagaagggcaagaccgtgagcaaggctcccaa 615
Query: 631 gatccaacggcttgtgacaccc-ttgaccctccagaggaagcgtgctagaatcg-ctgac 688
||| || || |||||||||||| |||||| |||||||||||||||| ||||||| | |||
Sbjct: 616 gatncagcgtcttgtgacaccctttgaccatccagaggaagcgtgccagaatcgcccgac 675
Query: 689 aagaagaagagg 700
||||||||||||
Sbjct: 676 aagaagaagagg 687
>gb|AV921455.1|AV921455 AV921455 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags23h18 3', mRNA sequence
Length = 662
Score = 509 bits (257), Expect = e-143
Identities = 439/499 (87%), Gaps = 3/499 (0%)
Strand = Plus / Minus
Query: 354 atggcaggcgtaatggtgagcgcaggaggaagtctgtccgtggttgcatcgtgagccaag 413
||||||||||| |||||||||| ||||||||||||| ||||||||||| || |||||||
Sbjct: 660 atggcaggcgtgttggtgagcgccggaggaagtctgttcgtggttgcattgtcagccaag 601
Query: 414 acctatctgttatcaacttggtgattgtgaagaagggtgagaatgatctgcctggtctga 473
| |||||||||||||||||||||||||| |||||||| ||||||||||||| || ||||
Sbjct: 600 atctatctgttatcaacttggtgattgtcaagaagggcaagaatgatctgccaggcctga 541
Query: 474 ctgacactgagaagccaaggatgaggggtcccaagagggcctccaagatcagaaagctgt 533
|||||||||||||||| ||||||||||| ||||| ||||| |||||||||| ||||| |
Sbjct: 540 ctgacactgagaagcccaggatgaggggacccaaaagggcttccaagatcaagaagctct 481
Query: 534 tcaaccttaacaaggatgatgatgtacgcaagtacgtgaacacataccgcaggacattca 593
|||||||| ||||||||||||||| ||| |||| || ||||||||||||||| | ||||
Sbjct: 480 tcaaccttggcaaggatgatgatgtccgccagtatgtcaacacataccgcaggtccttca 421
Query: 594 ctaccaagaacggcaagaaggtcagcaaggcacctaagatccaacggcttgtgacaccct 653
| | |||||| ||||||| || |||||||| || |||||||| || |||||||||||||
Sbjct: 420 cgaacaagaagggcaagaccgtgagcaaggctcccaagatccagcgtcttgtgacaccct 361
Query: 654 tgaccctccagaggaagcgtgctagaatcgctgacaagaagaagaggataactaagaaga 713
||||| |||||||||||||||| |||||||| ||||||||||||||||| |||||||||
Sbjct: 360 tgaccatccagaggaagcgtgccagaatcgccgacaagaagaagaggattgctaagaaga 301
Query: 714 agtctgaggctgctgagtaccagaagcttcttgcccagaggctgaaggaacagagggacc 773
||||||||||||| |||||||||||||| ||||| |||||| ||||||| || || ||||
Sbjct: 300 agtctgaggctgcagagtaccagaagctgcttgcacagaggttgaaggagcaaagagacc 241
Query: 774 gccggagcgagagcttggccaagaggaggtccaagctttctgccgccgccaaggcttctg 833
|| |||| |||||| |||||||||||||||| ||||||||||| || |||||||| |||
Sbjct: 240 gcaggagtgagagcatggccaagaggaggtcgaagctttctgctgctaccaaggctcctg 181
Query: 834 ctgccacctctgcttaaga 852
||||| |||||||||||
Sbjct: 180 ctgcc---tctgcttaaga 165
>gb|AL504978.1|AL504978 AL504978 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW07A02V 5', mRNA sequence
Length = 700
Score = 507 bits (256), Expect = e-142
Identities = 537/627 (85%), Gaps = 3/627 (0%)
Strand = Plus / Plus
Query: 91 caccatgaagttcaacatcgcgaacccttccaccgggtgccaaaagaagctggaaatcga 150
|||||||||||| |||||||||||||| |||| |||||||| |||||| |||| |||||
Sbjct: 32 caccatgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtggagatcga 91
Query: 151 tgacgaccagaagctgcgtgccttttatgaccgaaggatatcccaggaggtcagtggtga 210
|||||||||||||||||| | |||||||| || || ||||||||||| ||||||
Sbjct: 92 tgacgaccagaagctgcgaaacctttatgacaagagaatctcccaggaggtagttggtga 151
Query: 211 tgctctgggtgaggagttcaagggttatgtcttcaagatcatgggtggatgtgacaagca 270
| |||||||||||| ||| |||| ||| ||||||||||||||||||| || || |||||
Sbjct: 152 tcttctgggtgaggaattcgagggctatatcttcaagatcatgggtggctgcgataagca 211
Query: 271 aggcttcccaatgaagcaaggagttttgacttctggtcgtgttcgtcttctgctccatag 330
||||||||||||||||||||||| | ||| |||| || ||||| |||||||| || ||
Sbjct: 212 gggcttcccaatgaagcaaggagtgctaactcctgggcgcgttcgccttctgcttcacag 271
Query: 331 gggcactccctgcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtctgt 390
|||||| | ||||| ||||| ||||||||||| |||||||||| |||||||||||||
Sbjct: 272 gggcacatcttgctttcgtggacatggcaggcgtgttggtgagcgccggaggaagtctgt 331
Query: 391 ccgtggttgcatcgtgagccaagacctatctgttatcaacttggtgattgtgaagaaggg 450
||||||||||| || |||||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 332 tcgtggttgcattgtcagccaagatctatctgttatcaacttggtgattgtcaagaaggg 391
Query: 451 tgagaatgatctgcctggtctgactgacactgagaagccaaggatgaggggtcccaagag 510
||||||||||||| || |||||||||||||||||||| ||||||||||| ||||| ||
Sbjct: 392 caagaatgatctgccaggcctgactgacactgagaagcccaggatgaggggacccaaaag 451
Query: 511 ggcctccaagatcagaaagctgttcaaccttaacaaggatgatgatgtacgcaagtacgt 570
||| |||||||||| ||||| ||||||||| ||||||||||||||| ||| |||| ||
Sbjct: 452 ggcttccaagatcaagaagctcttcaaccttggcaaggatgatgatgtccgccagtatgt 511
Query: 571 gaacacataccgcaggacattcactaccaagaacggcaagaaggtcagcaaggcacctaa 630
||||||||||||||| | ||||| | |||||| ||||||| || |||||||| || ||
Sbjct: 512 caacacataccgcaggtccttcacgaacaagaagggcaagaccgtgagcaaggctcccaa 571
Query: 631 gatccaacgg-cttgtgacacccttgaccctccagagg-aagcgtgctagaatcgctgac 688
|||||| ||| |||||||||||||||||| |||||||| |||||||| | |||||| |||
Sbjct: 572 gatccagcggtcttgtgacacccttgaccatccagaggaaagcgtgccaaaatcgccgac 631
Query: 689 aa-gaagaagaggataactaagaagaa 714
|| |||||||||||| |||| |||||
Sbjct: 632 aaggaagaagaggattgctaanaagaa 658
>gb|BI776540.2|BI776540 EBpi05_SQ001_N02_R pistil, 8 DPA, no treatment, cv Optic, EBpi05
Hordeum vulgare subsp. vulgare cDNA clone
EBpi05_SQ001_N02 5', mRNA sequence
Length = 519
Score = 507 bits (256), Expect = e-142
Identities = 448/512 (87%)
Strand = Plus / Plus
Query: 146 atcgatgacgaccagaagctgcgtgccttttatgaccgaaggatatcccaggaggtcagt 205
||||||||||||||||||||||| | |||||||| || || ||||||||||| |
Sbjct: 8 atcgatgacgaccagaagctgcggaacctttatgacaagagaatctcccaggaggtagtt 67
Query: 206 ggtgatgctctgggtgaggagttcaagggttatgtcttcaagatcatgggtggatgtgac 265
|||||| |||||||||||| |||||||||||| ||||||||||||||||||| |||||
Sbjct: 68 ggtgatcttctgggtgaggaattcaagggttatatcttcaagatcatgggtggctgtgat 127
Query: 266 aagcaaggcttcccaatgaagcaaggagttttgacttctggtcgtgttcgtcttctgctc 325
||||| |||||||| |||||||||||||| | |||||||| ||||| || ||||||||
Sbjct: 128 aagcagggcttcccgatgaagcaaggagtgctaacttctgggcgtgtccgccttctgctt 187
Query: 326 cataggggcactccctgcttccgtggttatggcaggcgtaatggtgagcgcaggaggaag 385
|| |||||||| || ||||||||||||| ||||||||||||||||||||||||||| |||
Sbjct: 188 cacaggggcacaccttgcttccgtggttttggcaggcgtaatggtgagcgcaggagaaag 247
Query: 386 tctgtccgtggttgcatcgtgagccaagacctatctgttatcaacttggtgattgtgaag 445
|| |||||||||||||| || ||||||||||| ||||||||||||||||||||||| |||
Sbjct: 248 tccgtccgtggttgcattgtcagccaagacctgtctgttatcaacttggtgattgtcaag 307
Query: 446 aagggtgagaatgatctgcctggtctgactgacactgagaagccaaggatgaggggtccc 505
|||||||||||||||||||| || || ||||||||||||||||| ||||||||||| |||
Sbjct: 308 aagggtgagaatgatctgccaggccttactgacactgagaagcccaggatgaggggaccc 367
Query: 506 aagagggcctccaagatcagaaagctgttcaaccttaacaaggatgatgatgtacgcaag 565
|||||||| |||||||||| ||||| ||||||||| ||||||||||||||| ||||
Sbjct: 368 aagagggcttccaagatcaagaagctcttcaaccttggcaaggatgatgatgtccgcagc 427
Query: 566 tacgtgaacacataccgcaggacattcactaccaagaacggcaagaaggtcagcaaggca 625
|| || ||||||||||||||||| ||| || |||||| ||||||||||| ||||||||
Sbjct: 428 tatgtcaacacataccgcaggaccttccttaacaagaagggcaagaaggtgagcaaggct 487
Query: 626 cctaagatccaacggcttgtgacacccttgac 657
|| |||||||| || |||||||| ||||||||
Sbjct: 488 cccaagatccagcgtcttgtgactcccttgac 519
>gb|BF255203.3|BF255203 HVSMEf0006D18f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0006D18f, mRNA sequence
Length = 598
Score = 505 bits (255), Expect = e-142
Identities = 474/547 (86%)
Strand = Plus / Plus
Query: 42 ccacccagcgctcgagctcctcgctccctgcgagcgcgcgccgcaacgccaccatgaagt 101
|||||||||| ||| | | ||||| || |||||| || |||||||| |||||||||||
Sbjct: 28 ccacccagcgttcgggttgctcgccgccggcgagctcgtgccgcaactccaccatgaagc 87
Query: 102 tcaacatcgcgaacccttccaccgggtgccaaaagaagctggaaatcgatgacgaccaga 161
| |||||||||||||| |||| |||||||| |||||| | || ||||||||||||||||
Sbjct: 88 tgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgacgaccaga 147
Query: 162 agctgcgtgccttttatgaccgaaggatatcccaggaggtcagtggtgatgctctgggtg 221
||||||| | |||||||| || || ||||||||||| |||| || ||||||||
Sbjct: 148 agctgcggaacctttatgacaagagaatctcccaggaggtagttggttatcttctgggtg 207
Query: 222 aggagttcaagggttatgtcttcaagatcatgggtggatgtgacaagcaaggcttcccaa 281
|||| |||||||||||| ||||||||||||||||||| ||||| ||||| |||||||| |
Sbjct: 208 aggaattcaagggttatatcttcaagatcatgggtggctgtgataagcagggcttcccga 267
Query: 282 tgaagcaaggagttttgacttctggtcgtgttcgtcttctgctccataggggcactccct 341
||||||||||||| | |||||||| ||||| || |||||||| || |||||||| || |
Sbjct: 268 tgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacaggggcacacctt 327
Query: 342 gcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtctgtccgtggttgca 401
|||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 328 gcttccgtggttttggcaggcgtaatggtgagcgcaggagaaagtccgtccgtggttgca 387
Query: 402 tcgtgagccaagacctatctgttatcaacttggtgattgtgaagaagggtgagaatgatc 461
| || ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 388 ttgtcagccaagacctgtctgttatcaacttggtgattgtcaagaagggtgagaatgatc 447
Query: 462 tgcctggtctgactgacactgagaagccaaggatgaggggtcccaagagggcctccaaga 521
|||| || || ||||||||||||||||| ||||||||||| ||||||||||| |||||||
Sbjct: 448 tgccaggccttactgacactgagaagcccaggatgaggggacccaagagggcttccaaga 507
Query: 522 tcagaaagctgttcaaccttaacaaggatgatgatgtacgcaagtacgtgaacacatacc 581
||| ||||| ||||||||| ||||||||||||||| |||| || || ||||||||||
Sbjct: 508 tcaagaagctcttcaaccttggcaaggatgatgatgtccgcagctatgtcaacacatacc 567
Query: 582 gcaggac 588
|||||||
Sbjct: 568 gcaggac 574
>gb|BQ471813.1|BQ471813 HV03I23r HV Hordeum vulgare subsp. vulgare cDNA clone HV03I23
5-PRIME, mRNA sequence
Length = 649
Score = 505 bits (255), Expect = e-142
Identities = 437/497 (87%), Gaps = 3/497 (0%)
Strand = Plus / Plus
Query: 356 ggcaggcgtaatggtgagcgcaggaggaagtctgtccgtggttgcatcgtgagccaagac 415
||||||||| |||||||||| ||||||||||||| ||||||||||| || ||||||||
Sbjct: 9 ggcaggcgtgttggtgagcgccggaggaagtctgttcgtggttgcattgtcagccaagat 68
Query: 416 ctatctgttatcaacttggtgattgtgaagaagggtgagaatgatctgcctggtctgact 475
|||||||||||||||||||||||||| |||||||| ||||||||||||| || ||||||
Sbjct: 69 ctatctgttatcaacttggtgattgtcaagaagggcaagaatgatctgccaggcctgact 128
Query: 476 gacactgagaagccaaggatgaggggtcccaagagggcctccaagatcagaaagctgttc 535
|||||||||||||| ||||||||||| ||||| ||||| |||||||||| ||||| |||
Sbjct: 129 gacactgagaagcccaggatgaggggacccaaaagggcttccaagatcaagaagctcttc 188
Query: 536 aaccttaacaaggatgatgatgtacgcaagtacgtgaacacataccgcaggacattcact 595
|||||| ||||||||||||||| ||| |||| || ||||||||||||||| | |||||
Sbjct: 189 aaccttggcaaggatgatgatgtccgccagtatgtcaacacataccgcaggtccttcacg 248
Query: 596 accaagaacggcaagaaggtcagcaaggcacctaagatccaacggcttgtgacacccttg 655
| |||||| ||||||| || |||||||| || |||||||| || |||||||||||||||
Sbjct: 249 aacaagaagggcaagaccgtgagcaaggctcccaagatccagcgtcttgtgacacccttg 308
Query: 656 accctccagaggaagcgtgctagaatcgctgacaagaagaagaggataactaagaagaag 715
||| |||||||||||||||| |||||||| ||||||||||||||||| |||||||||||
Sbjct: 309 accatccagaggaagcgtgccagaatcgccgacaagaagaagaggattgctaagaagaag 368
Query: 716 tctgaggctgctgagtaccagaagcttcttgcccagaggctgaaggaacagagggaccgc 775
||||||||||| |||||||||||||| ||||| |||||| ||||||| || || ||||||
Sbjct: 369 tctgaggctgcagagtaccagaagctgcttgcacagaggttgaaggagcaaagagaccgc 428
Query: 776 cggagcgagagcttggccaagaggaggtccaagctttctgccgccgccaaggcttctgct 835
|||| |||||| |||||||||||||||| ||||||||||| || |||||||| |||||
Sbjct: 429 aggagtgagagcatggccaagaggaggtcgaagctttctgctgctaccaaggctcctgct 488
Query: 836 gccacctctgcttaaga 852
||| |||||||||||
Sbjct: 489 gcc---tctgcttaaga 502
>gb|BU972031.1|BU972031 HB20G09r BC Hordeum vulgare subsp. vulgare cDNA clone HB20G09
5-PRIME, mRNA sequence
Length = 504
Score = 502 bits (253), Expect = e-140
Identities = 430/489 (87%)
Strand = Plus / Plus
Query: 341 tgcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtctgtccgtggttgc 400
||||| ||||| ||||||||||| |||||||||| ||||||||||||| |||||||||
Sbjct: 13 tgctttcgtggacatggcaggcgtgttggtgagcgccggaggaagtctgttcgtggttgc 72
Query: 401 atcgtgagccaagacctatctgttatcaacttggtgattgtgaagaagggtgagaatgat 460
|| || |||||||| |||||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 73 attgtcagccaagatctatctgttatcaacttggtgattgtcaagaagggcaagaatgat 132
Query: 461 ctgcctggtctgactgacactgagaagccaaggatgaggggtcccaagagggcctccaag 520
||||| || |||||||||||||||||||| ||||||||||| ||||| ||||| ||||||
Sbjct: 133 ctgccaggcctgactgacactgagaagcccaggatgaggggacccaaaagggcttccaag 192
Query: 521 atcagaaagctgttcaaccttaacaaggatgatgatgtacgcaagtacgtgaacacatac 580
|||| ||||| ||||||||| ||||||||||||||| ||| |||| || |||||||||
Sbjct: 193 atcaagaagctcttcaaccttggcaaggatgatgatgtccgccagtatgtcaacacatac 252
Query: 581 cgcaggacattcactaccaagaacggcaagaaggtcagcaaggcacctaagatccaacgg 640
|||||| | ||||| | |||||| ||||||| || |||||||| || |||||||| ||
Sbjct: 253 cgcaggtccttcacgaacaagaagggcaagaccgtgagcaaggctcccaagatccagcgt 312
Query: 641 cttgtgacacccttgaccctccagaggaagcgtgctagaatcgctgacaagaagaagagg 700
|||||||||||||||||| |||||||||||||||| |||||||| |||||||||||||||
Sbjct: 313 cttgtgacacccttgaccatccagaggaagcgtgccagaatcgccgacaagaagaagagg 372
Query: 701 ataactaagaagaagtctgaggctgctgagtaccagaagcttcttgcccagaggctgaag 760
|| |||||||||||||||||||||| |||||||||||||| ||||| |||||| |||||
Sbjct: 373 attgctaagaagaagtctgaggctgcagagtaccagaagctgcttgcacagaggttgaag 432
Query: 761 gaacagagggaccgccggagcgagagcttggccaagaggaggtccaagctttctgccgcc 820
|| || || |||||| |||| |||||| |||||||||||||||| ||||||||||| ||
Sbjct: 433 gagcaaagagaccgcaggagtgagagcatggccaagaggaggtcgaagctttctgctgct 492
Query: 821 gccaaggct 829
||||||||
Sbjct: 493 accaaggct 501
>gb|BF255205.3|BF255205 HVSMEf0006D20f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0006D20f, mRNA sequence
Length = 598
Score = 500 bits (252), Expect = e-140
Identities = 473/547 (86%)
Strand = Plus / Plus
Query: 42 ccacccagcgctcgagctcctcgctccctgcgagcgcgcgccgcaacgccaccatgaagt 101
|||||||||| ||| | | ||||| || |||||| || |||||||| |||||||||||
Sbjct: 28 ccacccagcgttcgggttgctcgccgccggcgagctcgtgccgcaactccaccatgaagc 87
Query: 102 tcaacatcgcgaacccttccaccgggtgccaaaagaagctggaaatcgatgacgaccaga 161
| |||||||||||||| |||| |||||||| |||||| | || ||||||||||||||||
Sbjct: 88 tgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgacgaccaga 147
Query: 162 agctgcgtgccttttatgaccgaaggatatcccaggaggtcagtggtgatgctctgggtg 221
||||||| | |||||||| || || ||||||||||| |||| || ||||||||
Sbjct: 148 agctgcggaacctttatgacaagagaatctcccaggaggtagttggttatcttctgggtg 207
Query: 222 aggagttcaagggttatgtcttcaagatcatgggtggatgtgacaagcaaggcttcccaa 281
|||| |||||||||||| ||||||||||||||||||| ||||| ||||| |||||||| |
Sbjct: 208 aggaattcaagggttatatcttcaagatcatgggtggctgtgataagcagggcttcccga 267
Query: 282 tgaagcaaggagttttgacttctggtcgtgttcgtcttctgctccataggggcactccct 341
||||||||||||| | |||||||| ||||| || |||||||| || |||||||| || |
Sbjct: 268 tgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacaggggcacacctt 327
Query: 342 gcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtctgtccgtggttgca 401
|||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 328 gcttccgtggttttggcaggcgtaatggtgagcgcaggagaaagtccgtccgtggttgca 387
Query: 402 tcgtgagccaagacctatctgttatcaacttggtgattgtgaagaagggtgagaatgatc 461
| || ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 388 ttgtcagccaagacctgtctgttatcaacttggtgattgtcaagaagggtgagaatgatc 447
Query: 462 tgcctggtctgactgacactgagaagccaaggatgaggggtcccaagagggcctccaaga 521
|||| || || ||||||||||||||||| ||||||||||| ||||||||||| | |||||
Sbjct: 448 tgccaggccttactgacactgagaagcccaggatgaggggacccaagagggcttncaaga 507
Query: 522 tcagaaagctgttcaaccttaacaaggatgatgatgtacgcaagtacgtgaacacatacc 581
||| ||||| ||||||||| ||||||||||||||| |||| || || ||||||||||
Sbjct: 508 tcaagaagctcttcaaccttggcaaggatgatgatgtccgcagctatgtcaacacatacc 567
Query: 582 gcaggac 588
|||||||
Sbjct: 568 gcaggac 574
>gb|BM368086.2|BM368086 EBed01_SQ002_C05_R endosperm, 6 DPA, no treatment, cv Optic, EBed01
Hordeum vulgare subsp. vulgare cDNA clone
EBed01_SQ002_C05 5', mRNA sequence
Length = 563
Score = 500 bits (252), Expect = e-140
Identities = 468/540 (86%)
Strand = Plus / Plus
Query: 42 ccacccagcgctcgagctcctcgctccctgcgagcgcgcgccgcaacgccaccatgaagt 101
|||||||||| ||| | | ||||| || |||||| || |||||||| |||||||||||
Sbjct: 24 ccacccagcgttcgggttgctcgccgccggcgagctcgtgccgcaactccaccatgaagc 83
Query: 102 tcaacatcgcgaacccttccaccgggtgccaaaagaagctggaaatcgatgacgaccaga 161
| |||||||||||||| |||| |||||||| |||||| | || ||||||||||||||||
Sbjct: 84 tgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgacgaccaga 143
Query: 162 agctgcgtgccttttatgaccgaaggatatcccaggaggtcagtggtgatgctctgggtg 221
||||||| | |||||||| || || ||||||||||| ||||||| ||||||||
Sbjct: 144 agctgcggaacctttatgacaagagaatctcccaggaggtagttggtgatcttctgggtg 203
Query: 222 aggagttcaagggttatgtcttcaagatcatgggtggatgtgacaagcaaggcttcccaa 281
|||| |||||||||||| ||||||||||||||||||| ||||| ||||| |||||||| |
Sbjct: 204 aggaattcaagggttatatcttcaagatcatgggtggctgtgataagcagggcttcccga 263
Query: 282 tgaagcaaggagttttgacttctggtcgtgttcgtcttctgctccataggggcactccct 341
||||||||||||| | |||||||| ||||| || |||||||| || |||||||| || |
Sbjct: 264 tgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacaggggcacacctt 323
Query: 342 gcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtctgtccgtggttgca 401
|||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 324 gcttccgtggttttggcaggcgtaatggtgagcgcaggagaaagtccgtccgtggttgca 383
Query: 402 tcgtgagccaagacctatctgttatcaacttggtgattgtgaagaagggtgagaatgatc 461
| || ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 384 ttgtcagccaagacctgtctgttatcaacttggtgattgtcaagaagggtgagaatgatc 443
Query: 462 tgcctggtctgactgacactgagaagccaaggatgaggggtcccaagagggcctccaaga 521
|||| || || ||||||||||||||||| ||||||||||| ||||||||||| |||||||
Sbjct: 444 tgccaggccttactgacactgagaagcccaggatgaggggacccaagagggcttccaaga 503
Query: 522 tcagaaagctgttcaaccttaacaaggatgatgatgtacgcaagtacgtgaacacatacc 581
||| ||||| ||||||||| ||||||||||||||| |||| || || ||||||||||
Sbjct: 504 tcaagaagctcttcaaccttggcaaggatgatgatgtccgcagctatgtcaacacatacc 563
>gb|BM369453.2|BM369453 EBem07_SQ003_K01_R embryo, 28 DPA, no treatment, cv Optic, EBem07
Hordeum vulgare subsp. vulgare cDNA clone
EBem07_SQ003_K01 5', mRNA sequence
Length = 581
Score = 500 bits (252), Expect = e-140
Identities = 468/540 (86%)
Strand = Plus / Plus
Query: 42 ccacccagcgctcgagctcctcgctccctgcgagcgcgcgccgcaacgccaccatgaagt 101
|||||||||| ||| | | ||||| || |||||| || |||||||| |||||||||||
Sbjct: 42 ccacccagcgttcgggttgctcgccgccggcgagctcgtgccgcaactccaccatgaagc 101
Query: 102 tcaacatcgcgaacccttccaccgggtgccaaaagaagctggaaatcgatgacgaccaga 161
| |||||||||||||| |||| |||||||| |||||| | || ||||||||||||||||
Sbjct: 102 tgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgacgaccaga 161
Query: 162 agctgcgtgccttttatgaccgaaggatatcccaggaggtcagtggtgatgctctgggtg 221
||||||| | |||||||| || || ||||||||||| ||||||| ||||||||
Sbjct: 162 agctgcggaacctttatgacaagagaatctcccaggaggtagttggtgatcttctgggtg 221
Query: 222 aggagttcaagggttatgtcttcaagatcatgggtggatgtgacaagcaaggcttcccaa 281
|||| |||||||||||| ||||||||||||||||||| ||||| ||||| |||||||| |
Sbjct: 222 aggaattcaagggttatatcttcaagatcatgggtggctgtgataagcagggcttcccga 281
Query: 282 tgaagcaaggagttttgacttctggtcgtgttcgtcttctgctccataggggcactccct 341
||||||||||||| | |||||||| ||||| || |||||||| || |||||||| || |
Sbjct: 282 tgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacaggggcacacctt 341
Query: 342 gcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtctgtccgtggttgca 401
|||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 342 gcttccgtggttttggcaggcgtaatggtgagcgcaggagaaagtccgtccgtggttgca 401
Query: 402 tcgtgagccaagacctatctgttatcaacttggtgattgtgaagaagggtgagaatgatc 461
| || ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 402 ttgtcagccaagacctgtctgttatcaacttggtgattgtcaagaagggtgagaatgatc 461
Query: 462 tgcctggtctgactgacactgagaagccaaggatgaggggtcccaagagggcctccaaga 521
|||| || || ||||||||||||||||| ||||||||||| ||||||||||| |||||||
Sbjct: 462 tgccaggccttactgacactgagaagcccaggatgaggggacccaagagggcttccaaga 521
Query: 522 tcagaaagctgttcaaccttaacaaggatgatgatgtacgcaagtacgtgaacacatacc 581
||| ||||| ||||||||| ||||||||||||||| |||| || || ||||||||||
Sbjct: 522 tcaagaagctcttcaaccttggcaaggatgatgatgtccgcagctatgtcaacacatacc 581
>gb|BG418623.2|BG418623 HVSMEk0023I20f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0023I20f, mRNA sequence
Length = 850
Score = 498 bits (251), Expect = e-139
Identities = 526/615 (85%), Gaps = 2/615 (0%)
Strand = Plus / Plus
Query: 149 gatgacgaccagaagctgcgtgccttttatgaccgaaggatatcccaggaggtcagtggt 208
|||||||||||||||||||| | |||||||| || || ||||||||||| ||||
Sbjct: 1 gatgacgaccagaagctgcggaacctttatgacaagagaatctcccaggaggtagttggt 60
Query: 209 gatgctctgggtgaggagttcaagggttatgtcttcaagatcatgggtggatgtgacaag 268
|| |||||||||||| |||||||||||| ||||||||||||||||||| ||||| |||
Sbjct: 61 tatcttctgggtgaggaattcaagggttatatcttcaagatcatgggtggctgtgataag 120
Query: 269 caaggcttcccaatgaagcaaggagttttgacttctggtcgtgttcgtcttctgctccat 328
|| |||||||| |||||||||||||| | |||||||| ||||| || |||||||| ||
Sbjct: 121 cagggcttcccgatgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcac 180
Query: 329 aggggcactccctgcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtct 388
|||||||| || ||||||||||||| ||||||||||||||||||||||||||| |||||
Sbjct: 181 aggggcacaccttgcttccgtggttttggcaggcgtaatggtgagcgcaggagaaagtcc 240
Query: 389 gtccgtggttgcatcgtgagccaagacctatctgttatcaacttggtgattgtgaagaag 448
|||||||||||||| || ||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 241 gtccgtggttgcattgtcagccaagacctgtctgttatcaacttggtgattgtcaagaag 300
Query: 449 ggtgagaatgatctgcctggtctgactgacactgagaagccaaggatgaggggtcccaag 508
||||||||||||||||| || || ||||||||||||||||| ||||||||||| ||||||
Sbjct: 301 ggtgagaatgatctgccaggccttactgacactgagaagcccaggatgaggggacccaag 360
Query: 509 agggcctccaagatcagaaagctgttcaaccttaacaaggatgatgatgtacgcaagtac 568
||||| |||||||||| ||||| ||||||||| ||||||||||||||| |||| ||
Sbjct: 361 agggcttccaagatcaagaagctcttcaaccttggcaaggatgatgatgtccgcagctat 420
Query: 569 gtgaacacataccgcaggacattcactaccaagaacggcaagaaggtcagcaaggcacct 628
|| ||||||||||||| ||| ||| || |||||| ||||||||||| |||||||| ||
Sbjct: 421 gtcaacacataccgcaagaccttccttaacaagaagggcaagaaggtgagcaaggctccc 480
Query: 629 aagatccaacggcttgtgacacccttgaccc-tccagaggaagcgtgctagaatcgctga 687
|||||||| || |||||||| |||||||||| | |||| ||||||||| | |||||| ||
Sbjct: 481 aagatccagcgtcttgtgactcccttgaccctttcaga-gaagcgtgccacaatcgccga 539
Query: 688 caagaagaagaggataactaagaagaagtctgaggctgctgagtaccagaagcttcttgc 747
||||| ||| |||| | | || ||||| ||||||| |||||||||||||| | ||
Sbjct: 540 caagatgaataggaccgcctaaaataagtcataggctgcagagtaccagaagctgttagc 599
Query: 748 ccagaggctgaagga 762
||| |||||| ||||
Sbjct: 600 ccaaaggctggagga 614
>gb|BQ460157.1|BQ460157 HA07A21r HA Hordeum vulgare subsp. vulgare cDNA clone HA07A21
5-PRIME, mRNA sequence
Length = 567
Score = 498 bits (251), Expect = e-139
Identities = 446/511 (87%)
Strand = Plus / Plus
Query: 78 cgcgccgcaacgccaccatgaagttcaacatcgcgaacccttccaccgggtgccaaaaga 137
|||||||| || ||||||||||||| |||||||||||||| |||| |||||||| ||||
Sbjct: 44 cgcgccgccactccaccatgaagttgaacatcgcgaaccccaccacggggtgccagaaga 103
Query: 138 agctggaaatcgatgacgaccagaagctgcgtgccttttatgaccgaaggatatcccagg 197
|| | || ||||||||||||||||||||||| | |||||||| || || |||||||
Sbjct: 104 aggtcgagatcgatgacgaccagaagctgcggaacctttatgacaagagaatctcccagg 163
Query: 198 aggtcagtggtgatgctctgggtgaggagttcaagggttatgtcttcaagatcatgggtg 257
|||| ||||||| |||||||||||| |||||||||||| ||||||||||||||||||
Sbjct: 164 aggtagttggtgatcttctgggtgaggaattcaagggttatatcttcaagatcatgggtg 223
Query: 258 gatgtgacaagcaaggcttcccaatgaagcaaggagttttgacttctggtcgtgttcgtc 317
| ||||| ||||| || ||||| |||||||||||||| | |||||||| ||||| || |
Sbjct: 224 gctgtgataagcagggtttcccgatgaagcaaggagtgctaacttctgggcgtgtccgcc 283
Query: 318 ttctgctccataggggcactccctgcttccgtggttatggcaggcgtaatggtgagcgca 377
||||||| || |||||||| || ||||||||||||| |||||||||||||||||||||||
Sbjct: 284 ttctgcttcacaggggcacaccttgcttccgtggttttggcaggcgtaatggtgagcgca 343
Query: 378 ggaggaagtctgtccgtggttgcatcgtgagccaagacctatctgttatcaacttggtga 437
|||| ||||| |||||||||||||| || ||||||||||| |||||||||||||||||||
Sbjct: 344 ggagaaagtccgtccgtggttgcattgtcagccaagacctgtctgttatcaacttggtga 403
Query: 438 ttgtgaagaagggtgagaatgatctgcctggtctgactgacactgagaagccaaggatga 497
|||| |||||||||||||||||||| || || || ||||||||||||||||| |||||||
Sbjct: 404 ttgtcaagaagggtgagaatgatctaccaggccttactgacactgagaagcccaggatga 463
Query: 498 ggggtcccaagagggcctccaagatcagaaagctgttcaaccttaacaaggatgatgatg 557
|||| ||||||||||| |||||||||| ||||| ||||||||| ||||||||||||||
Sbjct: 464 ggggacccaagagggcttccaagatcaagaagctcttcaaccttggcaaggatgatgatg 523
Query: 558 tacgcaagtacgtgaacacataccgcaggac 588
| |||| || || |||||||||||||||||
Sbjct: 524 tccgcagctatgtcaacacataccgcaggac 554
>gb|BQ464795.1|BQ464795 HU01I16T HU Hordeum vulgare subsp. vulgare cDNA clone HU01I16
5-PRIME, mRNA sequence
Length = 565
Score = 498 bits (251), Expect = e-139
Identities = 446/511 (87%)
Strand = Plus / Plus
Query: 78 cgcgccgcaacgccaccatgaagttcaacatcgcgaacccttccaccgggtgccaaaaga 137
|||||||| || ||||||||||||| |||||||||||||| |||| |||||||| ||||
Sbjct: 33 cgcgccgccactccaccatgaagttgaacatcgcgaaccccaccacggggtgccagaaga 92
Query: 138 agctggaaatcgatgacgaccagaagctgcgtgccttttatgaccgaaggatatcccagg 197
|| | || ||||||||||||||||||||||| | |||||||| || || |||||||
Sbjct: 93 aggtcgagatcgatgacgaccagaagctgcggaacctttatgacaagagaatctcccagg 152
Query: 198 aggtcagtggtgatgctctgggtgaggagttcaagggttatgtcttcaagatcatgggtg 257
|||| ||||||| |||||||||||| |||||||||||| ||||||||||||||||||
Sbjct: 153 aggtagttggtgatcttctgggtgaggaattcaagggttatatcttcaagatcatgggtg 212
Query: 258 gatgtgacaagcaaggcttcccaatgaagcaaggagttttgacttctggtcgtgttcgtc 317
| ||||| ||||| || ||||| |||||||||||||| | |||||||| ||||| || |
Sbjct: 213 gctgtgataagcagggtttcccgatgaagcaaggagtgctaacttctgggcgtgtccgcc 272
Query: 318 ttctgctccataggggcactccctgcttccgtggttatggcaggcgtaatggtgagcgca 377
||||||| || |||||||| || ||||||||||||| |||||||||||||||||||||||
Sbjct: 273 ttctgcttcacaggggcacaccttgcttccgtggttttggcaggcgtaatggtgagcgca 332
Query: 378 ggaggaagtctgtccgtggttgcatcgtgagccaagacctatctgttatcaacttggtga 437
|||| ||||| |||||||||||||| || ||||||||||| |||||||||||||||||||
Sbjct: 333 ggagaaagtccgtccgtggttgcattgtcagccaagacctgtctgttatcaacttggtga 392
Query: 438 ttgtgaagaagggtgagaatgatctgcctggtctgactgacactgagaagccaaggatga 497
|||| |||||||||||||||||||| || || || ||||||||||||||||| |||||||
Sbjct: 393 ttgtcaagaagggtgagaatgatctaccaggccttactgacactgagaagcccaggatga 452
Query: 498 ggggtcccaagagggcctccaagatcagaaagctgttcaaccttaacaaggatgatgatg 557
|||| ||||||||||| |||||||||| ||||| ||||||||| ||||||||||||||
Sbjct: 453 ggggacccaagagggcttccaagatcaagaagctcttcaaccttggcaaggatgatgatg 512
Query: 558 tacgcaagtacgtgaacacataccgcaggac 588
| |||| || || |||||||||||||||||
Sbjct: 513 tccgcagctatgtcaacacataccgcaggac 543
>gb|BU983951.1|BU983951 HA31I16r HA Hordeum vulgare subsp. vulgare cDNA clone HA31I16
5-PRIME, mRNA sequence
Length = 594
Score = 498 bits (251), Expect = e-139
Identities = 446/511 (87%)
Strand = Plus / Plus
Query: 78 cgcgccgcaacgccaccatgaagttcaacatcgcgaacccttccaccgggtgccaaaaga 137
|||||||| || ||||||||||||| |||||||||||||| |||| |||||||| ||||
Sbjct: 77 cgcgccgccactccaccatgaagttgaacatcgcgaaccccaccacggggtgccagaaga 136
Query: 138 agctggaaatcgatgacgaccagaagctgcgtgccttttatgaccgaaggatatcccagg 197
|| | || ||||||||||||||||||||||| | |||||||| || || |||||||
Sbjct: 137 aggtcgagatcgatgacgaccagaagctgcggaacctttatgacaagagaatctcccagg 196
Query: 198 aggtcagtggtgatgctctgggtgaggagttcaagggttatgtcttcaagatcatgggtg 257
|||| ||||||| |||||||||||| |||||||||||| ||||||||||||||||||
Sbjct: 197 aggtagttggtgatcttctgggtgaggaattcaagggttatatcttcaagatcatgggtg 256
Query: 258 gatgtgacaagcaaggcttcccaatgaagcaaggagttttgacttctggtcgtgttcgtc 317
| ||||| ||||| || ||||| |||||||||||||| | |||||||| ||||| || |
Sbjct: 257 gctgtgataagcagggtttcccgatgaagcaaggagtgctaacttctgggcgtgtccgcc 316
Query: 318 ttctgctccataggggcactccctgcttccgtggttatggcaggcgtaatggtgagcgca 377
||||||| || |||||||| || ||||||||||||| |||||||||||||||||||||||
Sbjct: 317 ttctgcttcacaggggcacaccttgcttccgtggttttggcaggcgtaatggtgagcgca 376
Query: 378 ggaggaagtctgtccgtggttgcatcgtgagccaagacctatctgttatcaacttggtga 437
|||| ||||| |||||||||||||| || ||||||||||| |||||||||||||||||||
Sbjct: 377 ggagaaagtccgtccgtggttgcattgtcagccaagacctgtctgttatcaacttggtga 436
Query: 438 ttgtgaagaagggtgagaatgatctgcctggtctgactgacactgagaagccaaggatga 497
|||| |||||||||||||||||||| || || || ||||||||||||||||| |||||||
Sbjct: 437 ttgtcaagaagggtgagaatgatctaccaggccttactgacactgagaagcccaggatga 496
Query: 498 ggggtcccaagagggcctccaagatcagaaagctgttcaaccttaacaaggatgatgatg 557
|||| ||||||||||| |||||||||| ||||| ||||||||| ||||||||||||||
Sbjct: 497 ggggacccaagagggcttccaagatcaagaagctcttcaaccttggcaaggatgatgatg 556
Query: 558 tacgcaagtacgtgaacacataccgcaggac 588
| |||| || || |||||||||||||||||
Sbjct: 557 tccgcagctatgtcaacacataccgcaggac 587
>gb|BQ460695.1|BQ460695 HA06D11r HA Hordeum vulgare subsp. vulgare cDNA clone HA06D11
5-PRIME, mRNA sequence
Length = 587
Score = 496 bits (250), Expect = e-139
Identities = 454/522 (86%)
Strand = Plus / Plus
Query: 42 ccacccagcgctcgagctcctcgctccctgcgagcgcgcgccgcaacgccaccatgaagt 101
|||||||||| ||| | | ||||| || |||||| || |||||||| |||||||||||
Sbjct: 51 ccacccagcgttcgggttgctcgccgccggcgagctcgtgccgcaactccaccatgaagc 110
Query: 102 tcaacatcgcgaacccttccaccgggtgccaaaagaagctggaaatcgatgacgaccaga 161
| |||||||||||||| |||| |||||||| |||||| | || ||||||||||||||||
Sbjct: 111 tgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgacgaccaga 170
Query: 162 agctgcgtgccttttatgaccgaaggatatcccaggaggtcagtggtgatgctctgggtg 221
||||||| | |||||||| || || ||||||||||| ||||||| ||||||||
Sbjct: 171 agctgcggaacctttatgacaagagaatctcccaggaggtagttggtgatcttctgggtg 230
Query: 222 aggagttcaagggttatgtcttcaagatcatgggtggatgtgacaagcaaggcttcccaa 281
|||| |||||||||||| ||||||||||||||||||| ||||| ||||| |||||||| |
Sbjct: 231 aggaattcaagggttatatcttcaagatcatgggtggctgtgataagcagggcttcccga 290
Query: 282 tgaagcaaggagttttgacttctggtcgtgttcgtcttctgctccataggggcactccct 341
||||||||||||| | |||||||| ||||| || |||||||| || |||||||| || |
Sbjct: 291 tgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacaggggcacacctt 350
Query: 342 gcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtctgtccgtggttgca 401
|||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 351 gcttccgtggttttggcaggcgtaatggtgagcgcaggagaaagtccgtccgtggttgca 410
Query: 402 tcgtgagccaagacctatctgttatcaacttggtgattgtgaagaagggtgagaatgatc 461
| || ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 411 ttgtcagccaagacctgtctgttatcaacttggtgattgtcaagaagggtgagaatgatc 470
Query: 462 tgcctggtctgactgacactgagaagccaaggatgaggggtcccaagagggcctccaaga 521
|||| || || ||||||||||||||||| ||||||||||| ||||||||||| |||||||
Sbjct: 471 tgccaggccttactgacactgagaagcccaggatgaggggacccaagagggcttccaaga 530
Query: 522 tcagaaagctgttcaaccttaacaaggatgatgatgtacgca 563
||| ||||| ||||||||| ||||||||||||||| ||||
Sbjct: 531 tcaagaagctcttcaaccttggcaaggatgatgatgtccgca 572
>gb|BQ469079.1|BQ469079 HM03F03r HM Hordeum vulgare subsp. vulgare cDNA clone HM03F03
5-PRIME, mRNA sequence
Length = 568
Score = 496 bits (250), Expect = e-139
Identities = 454/522 (86%)
Strand = Plus / Plus
Query: 42 ccacccagcgctcgagctcctcgctccctgcgagcgcgcgccgcaacgccaccatgaagt 101
|||||||||| ||| | | ||||| || |||||| || |||||||| |||||||||||
Sbjct: 32 ccacccagcgttcgggttgctcgccgccggcgagctcgtgccgcaactccaccatgaagc 91
Query: 102 tcaacatcgcgaacccttccaccgggtgccaaaagaagctggaaatcgatgacgaccaga 161
| |||||||||||||| |||| |||||||| |||||| | || ||||||||||||||||
Sbjct: 92 tgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgacgaccaga 151
Query: 162 agctgcgtgccttttatgaccgaaggatatcccaggaggtcagtggtgatgctctgggtg 221
||||||| | |||||||| || || ||||||||||| ||||||| ||||||||
Sbjct: 152 agctgcggaacctttatgacaagagaatctcccaggaggtagttggtgatcttctgggtg 211
Query: 222 aggagttcaagggttatgtcttcaagatcatgggtggatgtgacaagcaaggcttcccaa 281
|||| |||||||||||| ||||||||||||||||||| ||||| ||||| |||||||| |
Sbjct: 212 aggaattcaagggttatatcttcaagatcatgggtggctgtgataagcagggcttcccga 271
Query: 282 tgaagcaaggagttttgacttctggtcgtgttcgtcttctgctccataggggcactccct 341
||||||||||||| | |||||||| ||||| || |||||||| || |||||||| || |
Sbjct: 272 tgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacaggggcacacctt 331
Query: 342 gcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtctgtccgtggttgca 401
|||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 332 gcttccgtggttttggcaggcgtaatggtgagcgcaggagaaagtccgtccgtggttgca 391
Query: 402 tcgtgagccaagacctatctgttatcaacttggtgattgtgaagaagggtgagaatgatc 461
| || ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 392 ttgtcagccaagacctgtctgttatcaacttggtgattgtcaagaagggtgagaatgatc 451
Query: 462 tgcctggtctgactgacactgagaagccaaggatgaggggtcccaagagggcctccaaga 521
|||| || || ||||||||||||||||| ||||||||||| ||||||||||| |||||||
Sbjct: 452 tgccaggccttactgacactgagaagcccaggatgaggggacccaagagggcttccaaga 511
Query: 522 tcagaaagctgttcaaccttaacaaggatgatgatgtacgca 563
||| ||||| ||||||||| ||||||||||||||| ||||
Sbjct: 512 tcaagaagctcttcaaccttggcaaggatgatgatgtccgca 553
>gb|BQ768031.1|BQ768031 EBro08_SQ010_C14_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ010_C14 5', mRNA sequence
Length = 557
Score = 496 bits (250), Expect = e-139
Identities = 454/522 (86%)
Strand = Plus / Plus
Query: 42 ccacccagcgctcgagctcctcgctccctgcgagcgcgcgccgcaacgccaccatgaagt 101
|||||||||| ||| | | ||||| || |||||| || |||||||| |||||||||||
Sbjct: 28 ccacccagcgttcgggttgctcgccgccggcgagctcgtgccgcaactccaccatgaagc 87
Query: 102 tcaacatcgcgaacccttccaccgggtgccaaaagaagctggaaatcgatgacgaccaga 161
| |||||||||||||| |||| |||||||| |||||| | || ||||||||||||||||
Sbjct: 88 tgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgacgaccaga 147
Query: 162 agctgcgtgccttttatgaccgaaggatatcccaggaggtcagtggtgatgctctgggtg 221
||||||| | |||||||| || || ||||||||||| ||||||| ||||||||
Sbjct: 148 agctgcggaacctttatgacaagagaatctcccaggaggtagttggtgatcttctgggtg 207
Query: 222 aggagttcaagggttatgtcttcaagatcatgggtggatgtgacaagcaaggcttcccaa 281
|||| |||||||||||| ||||||||||||||||||| ||||| ||||| |||||||| |
Sbjct: 208 aggaattcaagggttatatcttcaagatcatgggtggctgtgataagcagggcttcccga 267
Query: 282 tgaagcaaggagttttgacttctggtcgtgttcgtcttctgctccataggggcactccct 341
||||||||||||| | |||||||| ||||| || |||||||| || |||||||| || |
Sbjct: 268 tgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacaggggcacacctt 327
Query: 342 gcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtctgtccgtggttgca 401
|||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 328 gcttccgtggttttggcaggcgtaatggtgagcgcaggagaaagtccgtccgtggttgca 387
Query: 402 tcgtgagccaagacctatctgttatcaacttggtgattgtgaagaagggtgagaatgatc 461
| || ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 388 ttgtcagccaagacctgtctgttatcaacttggtgattgtcaagaagggtgagaatgatc 447
Query: 462 tgcctggtctgactgacactgagaagccaaggatgaggggtcccaagagggcctccaaga 521
|||| || || ||||||||||||||||| ||||||||||| ||||||||||| |||||||
Sbjct: 448 tgccaggccttactgacactgagaagcccaggatgaggggacccaagagggcttccaaga 507
Query: 522 tcagaaagctgttcaaccttaacaaggatgatgatgtacgca 563
||| ||||| ||||||||| ||||||||||||||| ||||
Sbjct: 508 tcaagaagctcttcaaccttggcaaggatgatgatgtccgca 549
>gb|BU984025.1|BU984025 HA31M06r HA Hordeum vulgare subsp. vulgare cDNA clone HA31M06
5-PRIME, mRNA sequence
Length = 574
Score = 496 bits (250), Expect = e-139
Identities = 454/522 (86%)
Strand = Plus / Plus
Query: 42 ccacccagcgctcgagctcctcgctccctgcgagcgcgcgccgcaacgccaccatgaagt 101
|||||||||| ||| | | ||||| || |||||| || |||||||| |||||||||||
Sbjct: 52 ccacccagcgttcgggttgctcgccgccggcgagctcgtgccgcaactccaccatgaagc 111
Query: 102 tcaacatcgcgaacccttccaccgggtgccaaaagaagctggaaatcgatgacgaccaga 161
| |||||||||||||| |||| |||||||| |||||| | || ||||||||||||||||
Sbjct: 112 tgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgacgaccaga 171
Query: 162 agctgcgtgccttttatgaccgaaggatatcccaggaggtcagtggtgatgctctgggtg 221
||||||| | |||||||| || || ||||||||||| ||||||| ||||||||
Sbjct: 172 agctgcggaacctttatgacaagagaatctcccaggaggtagttggtgatcttctgggtg 231
Query: 222 aggagttcaagggttatgtcttcaagatcatgggtggatgtgacaagcaaggcttcccaa 281
|||| |||||||||||| ||||||||||||||||||| ||||| ||||| |||||||| |
Sbjct: 232 aggaattcaagggttatatcttcaagatcatgggtggctgtgataagcagggcttcccga 291
Query: 282 tgaagcaaggagttttgacttctggtcgtgttcgtcttctgctccataggggcactccct 341
||||||||||||| | |||||||| ||||| || |||||||| || |||||||| || |
Sbjct: 292 tgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacaggggcacacctt 351
Query: 342 gcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtctgtccgtggttgca 401
|||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 352 gcttccgtggttttggcaggcgtaatggtgagcgcaggagaaagtccgtccgtggttgca 411
Query: 402 tcgtgagccaagacctatctgttatcaacttggtgattgtgaagaagggtgagaatgatc 461
| || ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 412 ttgtcagccaagacctgtctgttatcaacttggtgattgtcaagaagggtgagaatgatc 471
Query: 462 tgcctggtctgactgacactgagaagccaaggatgaggggtcccaagagggcctccaaga 521
|||| || || ||||||||||||||||| ||||||||||| ||||||||||| |||||||
Sbjct: 472 tgccaggccttactgacactgagaagcccaggatgaggggacccaagagggcttccaaga 531
Query: 522 tcagaaagctgttcaaccttaacaaggatgatgatgtacgca 563
||| ||||| ||||||||| ||||||||||||||| ||||
Sbjct: 532 tcaagaagctcttcaaccttggcaaggatgatgatgtccgca 573
>gb|CA025330.1|CA025330 HZ51N04r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ51N04
5-PRIME, mRNA sequence
Length = 577
Score = 496 bits (250), Expect = e-139
Identities = 454/522 (86%)
Strand = Plus / Plus
Query: 42 ccacccagcgctcgagctcctcgctccctgcgagcgcgcgccgcaacgccaccatgaagt 101
|||||||||| ||| | | ||||| || |||||| || |||||||| |||||||||||
Sbjct: 41 ccacccagcgttcgggttgctcgccgccggcgagctcgtgccgcaactccaccatgaagc 100
Query: 102 tcaacatcgcgaacccttccaccgggtgccaaaagaagctggaaatcgatgacgaccaga 161
| |||||||||||||| |||| |||||||| |||||| | || ||||||||||||||||
Sbjct: 101 tgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgacgaccaga 160
Query: 162 agctgcgtgccttttatgaccgaaggatatcccaggaggtcagtggtgatgctctgggtg 221
||||||| | |||||||| || || ||||||||||| ||||||| ||||||||
Sbjct: 161 agctgcggaacctttatgacaagagaatctcccaggaggtagttggtgatcttctgggtg 220
Query: 222 aggagttcaagggttatgtcttcaagatcatgggtggatgtgacaagcaaggcttcccaa 281
|||| |||||||||||| ||||||||||||||||||| ||||| ||||| |||||||| |
Sbjct: 221 aggaattcaagggttatatcttcaagatcatgggtggctgtgataagcagggcttcccga 280
Query: 282 tgaagcaaggagttttgacttctggtcgtgttcgtcttctgctccataggggcactccct 341
||||||||||||| | |||||||| ||||| || |||||||| || |||||||| || |
Sbjct: 281 tgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacaggggcacacctt 340
Query: 342 gcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtctgtccgtggttgca 401
|||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 341 gcttccgtggttttggcaggcgtaatggtgagcgcaggagaaagtccgtccgtggttgca 400
Query: 402 tcgtgagccaagacctatctgttatcaacttggtgattgtgaagaagggtgagaatgatc 461
| || ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 401 ttgtcagccaagacctgtctgttatcaacttggtgattgtcaagaagggtgagaatgatc 460
Query: 462 tgcctggtctgactgacactgagaagccaaggatgaggggtcccaagagggcctccaaga 521
|||| || || ||||||||||||||||| ||||||||||| ||||||||||| |||||||
Sbjct: 461 tgccaggccttactgacactgagaagcccaggatgaggggacccaagagggcttccaaga 520
Query: 522 tcagaaagctgttcaaccttaacaaggatgatgatgtacgca 563
||| ||||| ||||||||| ||||||||||||||| ||||
Sbjct: 521 tcaagaagctcttcaaccttggcaaggatgatgatgtccgca 562
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 145,236
Number of Sequences: 312970
Number of extensions: 145236
Number of successful extensions: 44376
Number of sequences better than 0.5: 259
Number of HSP's better than 0.5 without gapping: 258
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 43604
Number of HSP's gapped (non-prelim): 555
length of query: 1101
length of database: 175,134,539
effective HSP length: 19
effective length of query: 1082
effective length of database: 169,188,109
effective search space: 183061533938
effective search space used: 183061533938
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)