BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.392
(725 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BF262701.2|BF262701 HV_CEa0004L08f Hordeum vulgare seedl... 297 3e-079
gb|AV913783.1|AV913783 AV913783 K. Sato unpublished cDNA li... 297 3e-079
gb|AV916575.1|AV916575 AV916575 K. Sato unpublished cDNA li... 297 3e-079
gb|AV917344.1|AV917344 AV917344 K. Sato unpublished cDNA li... 297 3e-079
gb|AV917353.1|AV917353 AV917353 K. Sato unpublished cDNA li... 297 3e-079
gb|AV917720.1|AV917720 AV917720 K. Sato unpublished cDNA li... 297 3e-079
gb|AV917759.1|AV917759 AV917759 K. Sato unpublished cDNA li... 297 3e-079
gb|AV918017.1|AV918017 AV918017 K. Sato unpublished cDNA li... 297 3e-079
gb|AV918101.1|AV918101 AV918101 K. Sato unpublished cDNA li... 297 3e-079
gb|AV918520.1|AV918520 AV918520 K. Sato unpublished cDNA li... 297 3e-079
gb|AV919325.1|AV919325 AV919325 K. Sato unpublished cDNA li... 297 3e-079
gb|AV920280.1|AV920280 AV920280 K. Sato unpublished cDNA li... 297 3e-079
gb|AV920704.1|AV920704 AV920704 K. Sato unpublished cDNA li... 297 3e-079
gb|AV921130.1|AV921130 AV921130 K. Sato unpublished cDNA li... 297 3e-079
gb|AV921390.1|AV921390 AV921390 K. Sato unpublished cDNA li... 297 3e-079
gb|AV922343.1|AV922343 AV922343 K. Sato unpublished cDNA li... 297 3e-079
gb|AV922522.1|AV922522 AV922522 K. Sato unpublished cDNA li... 297 3e-079
gb|AV922532.1|AV922532 AV922532 K. Sato unpublished cDNA li... 297 3e-079
gb|BM816375.1|BM816375 HC03G10_T3.ab1 HC Hordeum vulgare su... 297 3e-079
gb|BQ458938.1|BQ458938 HA02M18r HA Hordeum vulgare subsp. v... 297 3e-079
gb|BI780112.2|BI780112 EBma08_SQ001_H01_R maternal, 28 DPA,... 297 3e-079
gb|BM098005.2|BM098005 EBpi03_SQ002_E14_R pistil, 4 DPA, no... 297 3e-079
gb|BM098140.2|BM098140 EBpi03_SQ002_K16_R pistil, 4 DPA, no... 297 3e-079
gb|BU968593.1|BU968593 HB08A02r BC Hordeum vulgare subsp. v... 297 3e-079
gb|BJ548694.1|BJ548694 BJ548694 K. Sato unpublished cDNA li... 297 3e-079
gb|BJ549338.1|BJ549338 BJ549338 K. Sato unpublished cDNA li... 297 3e-079
gb|BJ549789.1|BJ549789 BJ549789 K. Sato unpublished cDNA li... 297 3e-079
gb|BJ549790.1|BJ549790 BJ549790 K. Sato unpublished cDNA li... 297 3e-079
gb|BJ549815.1|BJ549815 BJ549815 K. Sato unpublished cDNA li... 297 3e-079
gb|BJ549858.1|BJ549858 BJ549858 K. Sato unpublished cDNA li... 297 3e-079
gb|BJ549905.1|BJ549905 BJ549905 K. Sato unpublished cDNA li... 297 3e-079
gb|BJ550091.1|BJ550091 BJ550091 K. Sato unpublished cDNA li... 297 3e-079
gb|BJ550219.1|BJ550219 BJ550219 K. Sato unpublished cDNA li... 297 3e-079
gb|CK122467.1|CK122467 BES1824103j11 BES1824 Hordeum vulgar... 297 3e-079
gb|CK122717.1|CK122717 BES1824105i24 BES1824 Hordeum vulgar... 297 3e-079
gb|CK124596.1|CK124596 BES1824109l18 BES1824 Hordeum vulgar... 297 3e-079
gb|L27348.1|BLYCRH1A Hordeum vulgare calreticulin (CRH1) mR... 297 3e-079
gb|L27349.1|BLYCRH2A Hordeum vulgare calreticulin (CRH2) mR... 297 3e-079
gb|BQ458831.1|BQ458831 HA04B09r HA Hordeum vulgare subsp. v... 291 2e-077
gb|BU972665.1|BU972665 HB22F20r BC Hordeum vulgare subsp. v... 291 2e-077
gb|BQ459248.1|BQ459248 HA01L24r HA Hordeum vulgare subsp. v... 289 6e-077
gb|BQ463263.1|BQ463263 HI04J04r HI Hordeum vulgare subsp. v... 289 6e-077
gb|BM098853.2|BM098853 EBpi05_SQ002_E03_R pistil, 8 DPA, no... 289 6e-077
gb|AL504181.1|AL504181 AL504181 Hordeum vulgare Barke roots... 287 3e-076
gb|AV919450.1|AV919450 AV919450 K. Sato unpublished cDNA li... 283 4e-075
gb|AJ460131.1|AJ460131 AJ460131 S00002 Hordeum vulgare subs... 281 2e-074
gb|BM816374.1|BM816374 HB107C09_SK.ab1 HB Hordeum vulgare s... 280 6e-074
gb|AJ460129.1|AJ460129 AJ460129 S00002 Hordeum vulgare subs... 268 2e-070
gb|AJ460133.1|AJ460133 AJ460133 S00002 Hordeum vulgare subs... 262 1e-068
gb|BJ549268.1|BJ549268 BJ549268 K. Sato unpublished cDNA li... 260 6e-068
gb|BU997002.1|BU997002 HI06J08r HI Hordeum vulgare subsp. v... 258 2e-067
gb|BQ469109.1|BQ469109 HM03G18r HM Hordeum vulgare subsp. v... 238 2e-061
gb|BU976777.1|BU976777 HA10E18u HA Hordeum vulgare subsp. v... 232 1e-059
gb|BJ549269.1|BJ549269 BJ549269 K. Sato unpublished cDNA li... 220 5e-056
gb|AV916493.1|AV916493 AV916493 K. Sato unpublished cDNA li... 218 2e-055
gb|BQ459855.1|BQ459855 HA07N23r HA Hordeum vulgare subsp. v... 216 8e-055
gb|AV916013.1|AV916013 AV916013 K. Sato unpublished cDNA li... 208 2e-052
gb|BQ656627.1|BQ656627 HA02M18u HA Hordeum vulgare subsp. v... 202 1e-050
gb|BM372811.2|BM372811 EBpi05_SQ003_P23_R pistil, 8 DPA, no... 202 1e-050
gb|CK123662.1|CK123662 BES1824105a04 BES1824 Hordeum vulgar... 202 1e-050
gb|BI780544.2|BI780544 EBes01_SQ001_C08_R embryo sac, 4-6 D... 200 5e-050
gb|CK124943.1|CK124943 BES1824111A2b10 BES1824 Hordeum vulg... 192 1e-047
gb|BI960168.1|BI960168 HVSMEn0023I09f Hordeum vulgare rachi... 190 4e-047
gb|AJ460132.1|AJ460132 AJ460132 S00002 Hordeum vulgare subs... 186 7e-046
gb|BM368444.2|BM368444 EBem08_SQ002_E12_R embryo, 40 DPA, n... 186 7e-046
gb|AJ460135.1|AJ460135 AJ460135 S00002 Hordeum vulgare subs... 184 3e-045
gb|CA016610.1|CA016610 HV06M18u HV Hordeum vulgare subsp. v... 182 1e-044
gb|AV913315.1|AV913315 AV913315 K. Sato unpublished cDNA li... 180 4e-044
gb|BQ661502.1|BQ661502 HM03L09u HM Hordeum vulgare subsp. v... 180 4e-044
gb|CA016177.1|CA016177 HV09O06u HV Hordeum vulgare subsp. v... 176 7e-043
gb|CK125302.1|CK125302 BES1824107k05 BES1824 Hordeum vulgar... 172 1e-041
gb|CB875878.1|CB875878 HX09K02w HX Hordeum vulgare subsp. v... 170 4e-041
gb|AV913005.1|AV913005 AV913005 K. Sato unpublished cDNA li... 168 2e-040
gb|AV918613.1|AV918613 AV918613 K. Sato unpublished cDNA li... 163 1e-038
gb|BI777034.2|BI777034 EBpi03_SQ001_L10_R pistil, 4 DPA, no... 163 1e-038
gb|CA031322.1|CA031322 HX09K02r HX Hordeum vulgare subsp. v... 161 4e-038
gb|BQ658029.1|BQ658029 HA06B03u HA Hordeum vulgare subsp. v... 153 1e-035
gb|BJ549341.1|BJ549341 BJ549341 K. Sato unpublished cDNA li... 153 1e-035
gb|BQ469764.1|BQ469764 HZ01M23r HZ Hordeum vulgare subsp. v... 149 1e-034
gb|AV917382.1|AV917382 AV917382 K. Sato unpublished cDNA li... 143 9e-033
gb|BQ656893.1|BQ656893 HA01J09u HA Hordeum vulgare subsp. v... 139 1e-031
gb|BQ469013.1|BQ469013 HM03B19r HM Hordeum vulgare subsp. v... 131 3e-029
gb|BM816376.1|BM816376 HB02B03_T3.ab1 HB Hordeum vulgare su... 127 5e-028
gb|BQ657586.1|BQ657586 HA07M18u HA Hordeum vulgare subsp. v... 127 5e-028
gb|CA000206.1|CA000206 HS09K13u HS Hordeum vulgare subsp. v... 127 5e-028
gb|BE559092.2|BE559092 HV_CEb0022M04f Hordeum vulgare seedl... 119 1e-025
gb|CA022990.1|CA022990 HZ44O22r HZ Hordeum vulgare subsp. v... 119 1e-025
gb|CV054717.1|CV054717 BNEL112e3 Barley EST endosperm libra... 119 1e-025
gb|AL450963.1|AL450963 AL450963 Hordeum vulgare Barke etiol... 117 5e-025
gb|AL500250.1|AL500250 AL500250 Hordeum vulgare Barke etiol... 117 5e-025
gb|BQ661418.1|BQ661418 HM03G18u HM Hordeum vulgare subsp. v... 117 5e-025
gb|BQ665993.1|BQ665993 HZ01M23u HZ Hordeum vulgare subsp. v... 98 5e-019
gb|BU977736.1|BU977736 HA11P03u HA Hordeum vulgare subsp. v... 98 5e-019
gb|AL512208.1|AL512208 AL512208 Hordeum vulgare Barke devel... 90 1e-016
gb|BQ656554.1|BQ656554 HA04B09u HA Hordeum vulgare subsp. v... 90 1e-016
gb|BG417985.1|BG417985 HVSMEk0020D16f Hordeum vulgare testa... 76 2e-012
gb|BG416656.2|BG416656 HVSMEk0014A09f Hordeum vulgare testa... 64 7e-009
gb|BU979542.1|BU979542 HA16H22r HA Hordeum vulgare subsp. v... 64 7e-009
gb|BJ549711.1|BJ549711 BJ549711 K. Sato unpublished cDNA li... 64 7e-009
gb|BE194414.2|BE194414 HVSMEh0085H15f Hordeum vulgare 5-45 ... 62 3e-008
gb|BF264489.1|BF264489 HV_CEa0009I24f Hordeum vulgare seedl... 62 3e-008
gb|BF265779.2|BF265779 HV_CEa0013F02f Hordeum vulgare seedl... 62 3e-008
gb|AV915864.1|AV915864 AV915864 K. Sato unpublished cDNA li... 62 3e-008
gb|BM817335.1|BM817335 HC105F07_T3.ab1 HC Hordeum vulgare s... 62 3e-008
gb|BM443194.2|BM443194 EBro02_SQ003_A04_R root, 3 week, hyd... 62 3e-008
gb|BQ762284.1|BQ762284 EBro01_SQ005_I10 _R root, 3 week, hy... 62 3e-008
gb|BQ763675.1|BQ763675 EBro03_SQ005_I06_R root, 3 week, wat... 62 3e-008
gb|BQ766286.1|BQ766286 EBro08_SQ005_E17_R root, 3 week, dro... 62 3e-008
gb|BJ544676.1|BJ544676 BJ544676 K. Sato unpublished cDNA li... 62 3e-008
gb|BJ546147.1|BJ546147 BJ546147 K. Sato unpublished cDNA li... 62 3e-008
gb|BJ546855.1|BJ546855 BJ546855 K. Sato unpublished cDNA li... 62 3e-008
gb|BJ549352.1|BJ549352 BJ549352 K. Sato unpublished cDNA li... 62 3e-008
gb|BJ549577.1|BJ549577 BJ549577 K. Sato unpublished cDNA li... 62 3e-008
gb|BJ549745.1|BJ549745 BJ549745 K. Sato unpublished cDNA li... 62 3e-008
gb|CB876813.1|CB876813 HP02H22T HP Hordeum vulgare subsp. v... 62 3e-008
gb|CD663284.1|CD663284 UCRHV18_05aa05_b1 Drought-stressed D... 62 3e-008
gb|AV932209.1|AV932209 AV932209 K. Sato unpublished cDNA li... 60 1e-007
gb|AV932384.1|AV932384 AV932384 K. Sato unpublished cDNA li... 60 1e-007
gb|AV932642.1|AV932642 AV932642 K. Sato unpublished cDNA li... 60 1e-007
gb|AV933129.1|AV933129 AV933129 K. Sato unpublished cDNA li... 60 1e-007
gb|BJ469617.1|BJ469617 BJ469617 K. Sato unpublished cDNA li... 60 1e-007
gb|BJ472996.1|BJ472996 BJ472996 K. Sato unpublished cDNA li... 60 1e-007
gb|BI948071.1|BI948071 HVSMEl0008B09f Hordeum vulgare spike... 58 4e-007
gb|AV929890.1|AV929890 AV929890 K. Sato unpublished cDNA li... 56 2e-006
gb|AV913100.1|AV913100 AV913100 K. Sato unpublished cDNA li... 54 7e-006
gb|AV920978.1|AV920978 AV920978 K. Sato unpublished cDNA li... 48 4e-004
gb|AL501515.1|AL501515 AL501515 Hordeum vulgare Barke roots... 46 0.002
gb|BI955444.1|BI955444 HVSMEm0023C11f Hordeum vulgare green... 46 0.002
gb|AJ460134.1|AJ460134 AJ460134 S00002 Hordeum vulgare subs... 46 0.002
gb|BJ547964.1|BJ547964 BJ547964 K. Sato unpublished cDNA li... 46 0.002
gb|AL500653.1|AL500653 AL500653 Hordeum vulgare Barke roots... 44 0.006
gb|CV058713.1|CV058713 BNEL40a5 Barley EST endosperm librar... 44 0.006
gb|BI779593.1|BI779593 EBro01_SQ004_I08_R root, 3 week, hyd... 42 0.025
gb|AJ432433.1|AJ432433 AJ432433 S00002 Hordeum vulgare subs... 42 0.025
gb|AJ460130.1|AJ460130 AJ460130 S00002 Hordeum vulgare subs... 42 0.025
gb|BQ467854.1|BQ467854 HR01C08r HR Hordeum vulgare subsp. v... 42 0.025
gb|BI776216.2|BI776216 EBem04_SQ001_A02_R embryo, 12 DPA, n... 42 0.025
gb|BQ755953.1|BQ755953 EBem04_SQ003_L02_R embryo, 12 DPA, n... 42 0.025
gb|BQ756958.1|BQ756958 EBem10_SQ002_F05_R embryo, 2 Day ger... 42 0.025
gb|BJ549615.1|BJ549615 BJ549615 K. Sato unpublished cDNA li... 42 0.025
gb|BQ460202.1|BQ460202 HA06P03r HA Hordeum vulgare subsp. v... 40 0.099
gb|BF256186.2|BF256186 HVSMEf0009A16f Hordeum vulgare seedl... 38 0.39
gb|BG417286.1|BG417286 HVSMEk0017G08f Hordeum vulgare testa... 38 0.39
gb|AW983416.3|AW983416 HVSMEg0010J02f Hordeum vulgare pre-a... 38 0.39
gb|CK124627.1|CK124627 BES1824109n01 BES1824 Hordeum vulgar... 38 0.39
>gb|BF262701.2|BF262701 HV_CEa0004L08f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0004L08f, mRNA sequence
Length = 859
Score = 297 bits (150), Expect = 3e-079
Identities = 246/278 (88%)
Strand = Plus / Plus
Query: 6 caaaagaaaatcaagaaccctaactaccagggtaaatggaaggcacctatgattgacaac 65
|||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 188 caaaagaaaatcaagaaccctaactaccagggcaaatggaaggcacctatgattgccaac 247
Query: 66 ccagatttcaaggatgatccgtacatttatgcatttgacagcctgaaatacattggcatt 125
||||| ||| |||||||||| ||||| || || |||||||||||||| |||||||| ||
Sbjct: 248 ccagacttccaggatgatccttacatctacgcttttgacagcctgaagtacattggaatc 307
Query: 126 gagctgtggcaggttaaatcaggcactttgtttgacaacatcatcatcactgatgatcct 185
||||||||||||||||| ||||| || |||||||||||||| |||||||||| ||| ||
Sbjct: 308 gagctgtggcaggttaagtcaggaacgttgtttgacaacattctcatcactgacgatgct 367
Query: 186 gcgttggccaagacttttgcagaggagacatggggcaagcacaaggaggcagagaagact 245
|| ||||||||||| ||||| || ||||| |||| |||||||||||| || |||||| ||
Sbjct: 368 gctttggccaagacatttgccgaagagacctgggccaagcacaaggatgctgagaaggct 427
Query: 246 gctttcgatgaggctgagaaaaagaaggaagaagagga 283
||||| || |||||||| || ||||||||||| |||||
Sbjct: 428 gcttttgacgaggctgaaaagaagaaggaagaggagga 465
>gb|AV913783.1|AV913783 AV913783 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags23e12 5', mRNA sequence
Length = 666
Score = 297 bits (150), Expect = 3e-079
Identities = 246/278 (88%)
Strand = Plus / Plus
Query: 6 caaaagaaaatcaagaaccctaactaccagggtaaatggaaggcacctatgattgacaac 65
|||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 255 caaaagaaaatcaagaaccctaactaccagggcaaatggaaggcacctatgattgccaac 314
Query: 66 ccagatttcaaggatgatccgtacatttatgcatttgacagcctgaaatacattggcatt 125
||||| ||| |||||||||| ||||| || || |||||||||||||| |||||||| ||
Sbjct: 315 ccagacttccaggatgatccttacatctacgcttttgacagcctgaagtacattggaatc 374
Query: 126 gagctgtggcaggttaaatcaggcactttgtttgacaacatcatcatcactgatgatcct 185
||||||||||||||||| ||||| || |||||||||||||| |||||||||| ||| ||
Sbjct: 375 gagctgtggcaggttaagtcaggaacgttgtttgacaacattctcatcactgacgatgct 434
Query: 186 gcgttggccaagacttttgcagaggagacatggggcaagcacaaggaggcagagaagact 245
|| ||||||||||| ||||| || ||||| |||| |||||||||||| || |||||| ||
Sbjct: 435 gctttggccaagacatttgccgaagagacctgggccaagcacaaggatgctgagaaggct 494
Query: 246 gctttcgatgaggctgagaaaaagaaggaagaagagga 283
||||| || |||||||| || ||||||||||| |||||
Sbjct: 495 gcttttgacgaggctgaaaagaagaaggaagaggagga 532
>gb|AV916575.1|AV916575 AV916575 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags17n02 5', mRNA sequence
Length = 583
Score = 297 bits (150), Expect = 3e-079
Identities = 246/278 (88%)
Strand = Plus / Plus
Query: 6 caaaagaaaatcaagaaccctaactaccagggtaaatggaaggcacctatgattgacaac 65
|||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 301 caaaagaaaatcaagaaccctaactaccagggcaaatggaaggcacctatgattgccaac 360
Query: 66 ccagatttcaaggatgatccgtacatttatgcatttgacagcctgaaatacattggcatt 125
||||| ||| |||||||||| ||||| || || |||||||||||||| |||||||| ||
Sbjct: 361 ccagacttccaggatgatccttacatctacgcttttgacagcctgaagtacattggaatc 420
Query: 126 gagctgtggcaggttaaatcaggcactttgtttgacaacatcatcatcactgatgatcct 185
||||||||||||||||| ||||| || |||||||||||||| |||||||||| ||| ||
Sbjct: 421 gagctgtggcaggttaagtcaggaacgttgtttgacaacattctcatcactgacgatgct 480
Query: 186 gcgttggccaagacttttgcagaggagacatggggcaagcacaaggaggcagagaagact 245
|| ||||||||||| ||||| || ||||| |||| |||||||||||| || |||||| ||
Sbjct: 481 gctttggccaagacatttgccgaagagacctgggccaagcacaaggatgctgagaaggct 540
Query: 246 gctttcgatgaggctgagaaaaagaaggaagaagagga 283
||||| || |||||||| || ||||||||||| |||||
Sbjct: 541 gcttttgacgaggctgaaaagaagaaggaagaggagga 578
>gb|AV917344.1|AV917344 AV917344 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags18i12 5', mRNA sequence
Length = 633
Score = 297 bits (150), Expect = 3e-079
Identities = 246/278 (88%)
Strand = Plus / Plus
Query: 6 caaaagaaaatcaagaaccctaactaccagggtaaatggaaggcacctatgattgacaac 65
|||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 208 caaaagaaaatcaagaaccctaactaccagggcaaatggaaggcacctatgattgccaac 267
Query: 66 ccagatttcaaggatgatccgtacatttatgcatttgacagcctgaaatacattggcatt 125
||||| ||| |||||||||| ||||| || || |||||||||||||| |||||||| ||
Sbjct: 268 ccagacttccaggatgatccttacatctacgcttttgacagcctgaagtacattggaatc 327
Query: 126 gagctgtggcaggttaaatcaggcactttgtttgacaacatcatcatcactgatgatcct 185
||||||||||||||||| ||||| || |||||||||||||| |||||||||| ||| ||
Sbjct: 328 gagctgtggcaggttaagtcaggaacgttgtttgacaacattctcatcactgacgatgct 387
Query: 186 gcgttggccaagacttttgcagaggagacatggggcaagcacaaggaggcagagaagact 245
|| ||||||||||| ||||| || ||||| |||| |||||||||||| || |||||| ||
Sbjct: 388 gctttggccaagacatttgccgaagagacctgggccaagcacaaggatgctgagaaggct 447
Query: 246 gctttcgatgaggctgagaaaaagaaggaagaagagga 283
||||| || |||||||| || ||||||||||| |||||
Sbjct: 448 gcttttgacgaggctgaaaagaagaaggaagaggagga 485
>gb|AV917353.1|AV917353 AV917353 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags18j04 5', mRNA sequence
Length = 659
Score = 297 bits (150), Expect = 3e-079
Identities = 246/278 (88%)
Strand = Plus / Plus
Query: 6 caaaagaaaatcaagaaccctaactaccagggtaaatggaaggcacctatgattgacaac 65
|||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 26 caaaagaaaatcaagaaccctaactaccagggcaaatggaaggcacctatgattgccaac 85
Query: 66 ccagatttcaaggatgatccgtacatttatgcatttgacagcctgaaatacattggcatt 125
||||| ||| |||||||||| ||||| || || |||||||||||||| |||||||| ||
Sbjct: 86 ccagacttccaggatgatccttacatctacgcttttgacagcctgaagtacattggaatc 145
Query: 126 gagctgtggcaggttaaatcaggcactttgtttgacaacatcatcatcactgatgatcct 185
||||||||||||||||| ||||| || |||||||||||||| |||||||||| ||| ||
Sbjct: 146 gagctgtggcaggttaagtcaggaacgttgtttgacaacattctcatcactgacgatgct 205
Query: 186 gcgttggccaagacttttgcagaggagacatggggcaagcacaaggaggcagagaagact 245
|| ||||||||||| ||||| || ||||| |||| |||||||||||| || |||||| ||
Sbjct: 206 gctttggccaagacatttgccgaagagacctgggccaagcacaaggatgctgagaaggct 265
Query: 246 gctttcgatgaggctgagaaaaagaaggaagaagagga 283
||||| || |||||||| || ||||||||||| |||||
Sbjct: 266 gcttttgacgaggctgaaaagaagaaggaagaggagga 303
>gb|AV917720.1|AV917720 AV917720 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags11c19 3', mRNA sequence
Length = 684
Score = 297 bits (150), Expect = 3e-079
Identities = 246/278 (88%)
Strand = Plus / Minus
Query: 6 caaaagaaaatcaagaaccctaactaccagggtaaatggaaggcacctatgattgacaac 65
|||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 596 caaaagaaaatcaagaaccctaactaccagggcaaatggaaggcacctatgattgccaac 537
Query: 66 ccagatttcaaggatgatccgtacatttatgcatttgacagcctgaaatacattggcatt 125
||||| ||| |||||||||| ||||| || || |||||||||||||| |||||||| ||
Sbjct: 536 ccagacttccaggatgatccttacatctacgcttttgacagcctgaagtacattggaatc 477
Query: 126 gagctgtggcaggttaaatcaggcactttgtttgacaacatcatcatcactgatgatcct 185
||||||||||||||||| ||||| || |||||||||||||| |||||||||| ||| ||
Sbjct: 476 gagctgtggcaggttaagtcaggaacgttgtttgacaacattctcatcactgacgatgct 417
Query: 186 gcgttggccaagacttttgcagaggagacatggggcaagcacaaggaggcagagaagact 245
|| ||||||||||| ||||| || ||||| |||| |||||||||||| || |||||| ||
Sbjct: 416 gctttggccaagacatttgccgaagagacctgggccaagcacaaggatgctgagaaggct 357
Query: 246 gctttcgatgaggctgagaaaaagaaggaagaagagga 283
||||| || |||||||| || ||||||||||| |||||
Sbjct: 356 gcttttgacgaggctgaaaagaagaaggaagaggagga 319
>gb|AV917759.1|AV917759 AV917759 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags11g03 3', mRNA sequence
Length = 573
Score = 297 bits (150), Expect = 3e-079
Identities = 246/278 (88%)
Strand = Plus / Minus
Query: 6 caaaagaaaatcaagaaccctaactaccagggtaaatggaaggcacctatgattgacaac 65
|||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 535 caaaagaaaatcaagaaccctaactaccagggcaaatggaaggcacctatgattgccaac 476
Query: 66 ccagatttcaaggatgatccgtacatttatgcatttgacagcctgaaatacattggcatt 125
||||| ||| |||||||||| ||||| || || |||||||||||||| |||||||| ||
Sbjct: 475 ccagacttccaggatgatccttacatctacgcttttgacagcctgaagtacattggaatc 416
Query: 126 gagctgtggcaggttaaatcaggcactttgtttgacaacatcatcatcactgatgatcct 185
||||||||||||||||| ||||| || |||||||||||||| |||||||||| ||| ||
Sbjct: 415 gagctgtggcaggttaagtcaggaacgttgtttgacaacattctcatcactgacgatgct 356
Query: 186 gcgttggccaagacttttgcagaggagacatggggcaagcacaaggaggcagagaagact 245
|| ||||||||||| ||||| || ||||| |||| |||||||||||| || |||||| ||
Sbjct: 355 gctttggccaagacatttgccgaagagacctgggccaagcacaaggatgctgagaaggct 296
Query: 246 gctttcgatgaggctgagaaaaagaaggaagaagagga 283
||||| || |||||||| || ||||||||||| |||||
Sbjct: 295 gcttttgacgaggctgaaaagaagaaggaagaggagga 258
>gb|AV918017.1|AV918017 AV918017 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags17h10 3', mRNA sequence
Length = 589
Score = 297 bits (150), Expect = 3e-079
Identities = 246/278 (88%)
Strand = Plus / Minus
Query: 6 caaaagaaaatcaagaaccctaactaccagggtaaatggaaggcacctatgattgacaac 65
|||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 585 caaaagaaaatcaagaaccctaactaccagggcaaatggaaggcacctatgattgccaac 526
Query: 66 ccagatttcaaggatgatccgtacatttatgcatttgacagcctgaaatacattggcatt 125
||||| ||| |||||||||| ||||| || || |||||||||||||| |||||||| ||
Sbjct: 525 ccagacttccaggatgatccttacatctacgcttttgacagcctgaagtacattggaatc 466
Query: 126 gagctgtggcaggttaaatcaggcactttgtttgacaacatcatcatcactgatgatcct 185
||||||||||||||||| ||||| || |||||||||||||| |||||||||| ||| ||
Sbjct: 465 gagctgtggcaggttaagtcaggaacgttgtttgacaacattctcatcactgacgatgct 406
Query: 186 gcgttggccaagacttttgcagaggagacatggggcaagcacaaggaggcagagaagact 245
|| ||||||||||| ||||| || ||||| |||| |||||||||||| || |||||| ||
Sbjct: 405 gctttggccaagacatttgccgaagagacctgggccaagcacaaggatgctgagaaggct 346
Query: 246 gctttcgatgaggctgagaaaaagaaggaagaagagga 283
||||| || |||||||| || ||||||||||| |||||
Sbjct: 345 gcttttgacgaggctgaaaagaagaaggaagaggagga 308
>gb|AV918101.1|AV918101 AV918101 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags17n02 3', mRNA sequence
Length = 626
Score = 297 bits (150), Expect = 3e-079
Identities = 246/278 (88%)
Strand = Plus / Minus
Query: 6 caaaagaaaatcaagaaccctaactaccagggtaaatggaaggcacctatgattgacaac 65
|||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 596 caaaagaaaatcaagaaccctaactaccagggcaaatggaaggcacctatgattgccaac 537
Query: 66 ccagatttcaaggatgatccgtacatttatgcatttgacagcctgaaatacattggcatt 125
||||| ||| |||||||||| ||||| || || |||||||||||||| |||||||| ||
Sbjct: 536 ccagacttccaggatgatccttacatctacgcttttgacagcctgaagtacattggaatc 477
Query: 126 gagctgtggcaggttaaatcaggcactttgtttgacaacatcatcatcactgatgatcct 185
||||||||||||||||| ||||| || |||||||||||||| |||||||||| ||| ||
Sbjct: 476 gagctgtggcaggttaagtcaggaacgttgtttgacaacattctcatcactgacgatgct 417
Query: 186 gcgttggccaagacttttgcagaggagacatggggcaagcacaaggaggcagagaagact 245
|| ||||||||||| ||||| || ||||| |||| |||||||||||| || |||||| ||
Sbjct: 416 gctttggccaagacatttgccgaagagacctgggccaagcacaaggatgctgagaaggct 357
Query: 246 gctttcgatgaggctgagaaaaagaaggaagaagagga 283
||||| || |||||||| || ||||||||||| |||||
Sbjct: 356 gcttttgacgaggctgaaaagaagaaggaagaggagga 319
>gb|AV918520.1|AV918520 AV918520 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags21f12 3', mRNA sequence
Length = 685
Score = 297 bits (150), Expect = 3e-079
Identities = 246/278 (88%)
Strand = Plus / Minus
Query: 6 caaaagaaaatcaagaaccctaactaccagggtaaatggaaggcacctatgattgacaac 65
|||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 609 caaaagaaaatcaagaaccctaactaccagggcaaatggaaggcacctatgattgccaac 550
Query: 66 ccagatttcaaggatgatccgtacatttatgcatttgacagcctgaaatacattggcatt 125
||||| ||| |||||||||| ||||| || || |||||||||||||| |||||||| ||
Sbjct: 549 ccagacttccaggatgatccttacatctacgcttttgacagcctgaagtacattggaatc 490
Query: 126 gagctgtggcaggttaaatcaggcactttgtttgacaacatcatcatcactgatgatcct 185
||||||||||||||||| ||||| || |||||||||||||| |||||||||| ||| ||
Sbjct: 489 gagctgtggcaggttaagtcaggaacgttgtttgacaacattctcatcactgacgatgct 430
Query: 186 gcgttggccaagacttttgcagaggagacatggggcaagcacaaggaggcagagaagact 245
|| ||||||||||| ||||| || ||||| |||| |||||||||||| || |||||| ||
Sbjct: 429 gctttggccaagacatttgccgaagagacctgggccaagcacaaggatgctgagaaggct 370
Query: 246 gctttcgatgaggctgagaaaaagaaggaagaagagga 283
||||| || |||||||| || ||||||||||| |||||
Sbjct: 369 gcttttgacgaggctgaaaagaagaaggaagaggagga 332
>gb|AV919325.1|AV919325 AV919325 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags5j04 3', mRNA sequence
Length = 667
Score = 297 bits (150), Expect = 3e-079
Identities = 246/278 (88%)
Strand = Plus / Minus
Query: 6 caaaagaaaatcaagaaccctaactaccagggtaaatggaaggcacctatgattgacaac 65
|||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 606 caaaagaaaatcaagaaccctaactaccagggcaaatggaaggcacctatgattgccaac 547
Query: 66 ccagatttcaaggatgatccgtacatttatgcatttgacagcctgaaatacattggcatt 125
||||| ||| |||||||||| ||||| || || |||||||||||||| |||||||| ||
Sbjct: 546 ccagacttccaggatgatccttacatctacgcttttgacagcctgaagtacattggaatc 487
Query: 126 gagctgtggcaggttaaatcaggcactttgtttgacaacatcatcatcactgatgatcct 185
||||||||||||||||| ||||| || |||||||||||||| |||||||||| ||| ||
Sbjct: 486 gagctgtggcaggttaagtcaggaacgttgtttgacaacattctcatcactgacgatgct 427
Query: 186 gcgttggccaagacttttgcagaggagacatggggcaagcacaaggaggcagagaagact 245
|| ||||||||||| ||||| || ||||| |||| |||||||||||| || |||||| ||
Sbjct: 426 gctttggccaagacatttgccgaagagacctgggccaagcacaaggatgctgagaaggct 367
Query: 246 gctttcgatgaggctgagaaaaagaaggaagaagagga 283
||||| || |||||||| || ||||||||||| |||||
Sbjct: 366 gcttttgacgaggctgaaaagaagaaggaagaggagga 329
>gb|AV920280.1|AV920280 AV920280 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags13b18 3', mRNA sequence
Length = 462
Score = 297 bits (150), Expect = 3e-079
Identities = 246/278 (88%)
Strand = Plus / Minus
Query: 6 caaaagaaaatcaagaaccctaactaccagggtaaatggaaggcacctatgattgacaac 65
|||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 399 caaaagaaaatcaagaaccctaactaccagggcaaatggaaggcacctatgattgccaac 340
Query: 66 ccagatttcaaggatgatccgtacatttatgcatttgacagcctgaaatacattggcatt 125
||||| ||| |||||||||| ||||| || || |||||||||||||| |||||||| ||
Sbjct: 339 ccagacttccaggatgatccttacatctacgcttttgacagcctgaagtacattggaatc 280
Query: 126 gagctgtggcaggttaaatcaggcactttgtttgacaacatcatcatcactgatgatcct 185
||||||||||||||||| ||||| || |||||||||||||| |||||||||| ||| ||
Sbjct: 279 gagctgtggcaggttaagtcaggaacgttgtttgacaacattctcatcactgacgatgct 220
Query: 186 gcgttggccaagacttttgcagaggagacatggggcaagcacaaggaggcagagaagact 245
|| ||||||||||| ||||| || ||||| |||| |||||||||||| || |||||| ||
Sbjct: 219 gctttggccaagacatttgccgaagagacctgggccaagcacaaggatgctgagaaggct 160
Query: 246 gctttcgatgaggctgagaaaaagaaggaagaagagga 283
||||| || |||||||| || ||||||||||| |||||
Sbjct: 159 gcttttgacgaggctgaaaagaagaaggaagaggagga 122
>gb|AV920704.1|AV920704 AV920704 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags15e01 3', mRNA sequence
Length = 659
Score = 297 bits (150), Expect = 3e-079
Identities = 246/278 (88%)
Strand = Plus / Minus
Query: 6 caaaagaaaatcaagaaccctaactaccagggtaaatggaaggcacctatgattgacaac 65
|||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 626 caaaagaaaatcaagaaccctaactaccagggcaaatggaaggcacctatgattgccaac 567
Query: 66 ccagatttcaaggatgatccgtacatttatgcatttgacagcctgaaatacattggcatt 125
||||| ||| |||||||||| ||||| || || |||||||||||||| |||||||| ||
Sbjct: 566 ccagacttccaggatgatccttacatctacgcttttgacagcctgaagtacattggaatc 507
Query: 126 gagctgtggcaggttaaatcaggcactttgtttgacaacatcatcatcactgatgatcct 185
||||||||||||||||| ||||| || |||||||||||||| |||||||||| ||| ||
Sbjct: 506 gagctgtggcaggttaagtcaggaacgttgtttgacaacattctcatcactgacgatgct 447
Query: 186 gcgttggccaagacttttgcagaggagacatggggcaagcacaaggaggcagagaagact 245
|| ||||||||||| ||||| || ||||| |||| |||||||||||| || |||||| ||
Sbjct: 446 gctttggccaagacatttgccgaagagacctgggccaagcacaaggatgctgagaaggct 387
Query: 246 gctttcgatgaggctgagaaaaagaaggaagaagagga 283
||||| || |||||||| || ||||||||||| |||||
Sbjct: 386 gcttttgacgaggctgaaaagaagaaggaagaggagga 349
>gb|AV921130.1|AV921130 AV921130 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags1b18 3', mRNA sequence
Length = 627
Score = 297 bits (150), Expect = 3e-079
Identities = 246/278 (88%)
Strand = Plus / Minus
Query: 6 caaaagaaaatcaagaaccctaactaccagggtaaatggaaggcacctatgattgacaac 65
|||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 620 caaaagaaaatcaagaaccctaactaccagggcaaatggaaggcacctatgattgccaac 561
Query: 66 ccagatttcaaggatgatccgtacatttatgcatttgacagcctgaaatacattggcatt 125
||||| ||| |||||||||| ||||| || || |||||||||||||| |||||||| ||
Sbjct: 560 ccagacttccaggatgatccttacatctacgcttttgacagcctgaagtacattggaatc 501
Query: 126 gagctgtggcaggttaaatcaggcactttgtttgacaacatcatcatcactgatgatcct 185
||||||||||||||||| ||||| || |||||||||||||| |||||||||| ||| ||
Sbjct: 500 gagctgtggcaggttaagtcaggaacgttgtttgacaacattctcatcactgacgatgct 441
Query: 186 gcgttggccaagacttttgcagaggagacatggggcaagcacaaggaggcagagaagact 245
|| ||||||||||| ||||| || ||||| |||| |||||||||||| || |||||| ||
Sbjct: 440 gctttggccaagacatttgccgaagagacctgggccaagcacaaggatgctgagaaggct 381
Query: 246 gctttcgatgaggctgagaaaaagaaggaagaagagga 283
||||| || |||||||| || ||||||||||| |||||
Sbjct: 380 gcttttgacgaggctgaaaagaagaaggaagaggagga 343
>gb|AV921390.1|AV921390 AV921390 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags23e12 3', mRNA sequence
Length = 677
Score = 297 bits (150), Expect = 3e-079
Identities = 246/278 (88%)
Strand = Plus / Minus
Query: 6 caaaagaaaatcaagaaccctaactaccagggtaaatggaaggcacctatgattgacaac 65
|||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 618 caaaagaaaatcaagaaccctaactaccagggcaaatggaaggcacctatgattgccaac 559
Query: 66 ccagatttcaaggatgatccgtacatttatgcatttgacagcctgaaatacattggcatt 125
||||| ||| |||||||||| ||||| || || |||||||||||||| |||||||| ||
Sbjct: 558 ccagacttccaggatgatccttacatctacgcttttgacagcctgaagtacattggaatc 499
Query: 126 gagctgtggcaggttaaatcaggcactttgtttgacaacatcatcatcactgatgatcct 185
||||||||||||||||| ||||| || |||||||||||||| |||||||||| ||| ||
Sbjct: 498 gagctgtggcaggttaagtcaggaacgttgtttgacaacattctcatcactgacgatgct 439
Query: 186 gcgttggccaagacttttgcagaggagacatggggcaagcacaaggaggcagagaagact 245
|| ||||||||||| ||||| || ||||| |||| |||||||||||| || |||||| ||
Sbjct: 438 gctttggccaagacatttgccgaagagacctgggccaagcacaaggatgctgagaaggct 379
Query: 246 gctttcgatgaggctgagaaaaagaaggaagaagagga 283
||||| || |||||||| || ||||||||||| |||||
Sbjct: 378 gcttttgacgaggctgaaaagaagaaggaagaggagga 341
>gb|AV922343.1|AV922343 AV922343 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags3m17 3', mRNA sequence
Length = 700
Score = 297 bits (150), Expect = 3e-079
Identities = 246/278 (88%)
Strand = Plus / Minus
Query: 6 caaaagaaaatcaagaaccctaactaccagggtaaatggaaggcacctatgattgacaac 65
|||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 583 caaaagaaaatcaagaaccctaactaccagggcaaatggaaggcacctatgattgccaac 524
Query: 66 ccagatttcaaggatgatccgtacatttatgcatttgacagcctgaaatacattggcatt 125
||||| ||| |||||||||| ||||| || || |||||||||||||| |||||||| ||
Sbjct: 523 ccagacttccaggatgatccttacatctacgcttttgacagcctgaagtacattggaatc 464
Query: 126 gagctgtggcaggttaaatcaggcactttgtttgacaacatcatcatcactgatgatcct 185
||||||||||||||||| ||||| || |||||||||||||| |||||||||| ||| ||
Sbjct: 463 gagctgtggcaggttaagtcaggaacgttgtttgacaacattctcatcactgacgatgct 404
Query: 186 gcgttggccaagacttttgcagaggagacatggggcaagcacaaggaggcagagaagact 245
|| ||||||||||| ||||| || ||||| |||| |||||||||||| || |||||| ||
Sbjct: 403 gctttggccaagacatttgccgaagagacctgggccaagcacaaggatgctgagaaggct 344
Query: 246 gctttcgatgaggctgagaaaaagaaggaagaagagga 283
||||| || |||||||| || ||||||||||| |||||
Sbjct: 343 gcttttgacgaggctgaaaagaagaaggaagaggagga 306
>gb|AV922522.1|AV922522 AV922522 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags18i12 3', mRNA sequence
Length = 678
Score = 297 bits (150), Expect = 3e-079
Identities = 246/278 (88%)
Strand = Plus / Minus
Query: 6 caaaagaaaatcaagaaccctaactaccagggtaaatggaaggcacctatgattgacaac 65
|||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 620 caaaagaaaatcaagaaccctaactaccagggcaaatggaaggcacctatgattgccaac 561
Query: 66 ccagatttcaaggatgatccgtacatttatgcatttgacagcctgaaatacattggcatt 125
||||| ||| |||||||||| ||||| || || |||||||||||||| |||||||| ||
Sbjct: 560 ccagacttccaggatgatccttacatctacgcttttgacagcctgaagtacattggaatc 501
Query: 126 gagctgtggcaggttaaatcaggcactttgtttgacaacatcatcatcactgatgatcct 185
||||||||||||||||| ||||| || |||||||||||||| |||||||||| ||| ||
Sbjct: 500 gagctgtggcaggttaagtcaggaacgttgtttgacaacattctcatcactgacgatgct 441
Query: 186 gcgttggccaagacttttgcagaggagacatggggcaagcacaaggaggcagagaagact 245
|| ||||||||||| ||||| || ||||| |||| |||||||||||| || |||||| ||
Sbjct: 440 gctttggccaagacatttgccgaagagacctgggccaagcacaaggatgctgagaaggct 381
Query: 246 gctttcgatgaggctgagaaaaagaaggaagaagagga 283
||||| || |||||||| || ||||||||||| |||||
Sbjct: 380 gcttttgacgaggctgaaaagaagaaggaagaggagga 343
>gb|AV922532.1|AV922532 AV922532 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags18j04 3', mRNA sequence
Length = 620
Score = 297 bits (150), Expect = 3e-079
Identities = 246/278 (88%)
Strand = Plus / Minus
Query: 6 caaaagaaaatcaagaaccctaactaccagggtaaatggaaggcacctatgattgacaac 65
|||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 595 caaaagaaaatcaagaaccctaactaccagggcaaatggaaggcacctatgattgccaac 536
Query: 66 ccagatttcaaggatgatccgtacatttatgcatttgacagcctgaaatacattggcatt 125
||||| ||| |||||||||| ||||| || || |||||||||||||| |||||||| ||
Sbjct: 535 ccagacttccaggatgatccttacatctacgcttttgacagcctgaagtacattggaatc 476
Query: 126 gagctgtggcaggttaaatcaggcactttgtttgacaacatcatcatcactgatgatcct 185
||||||||||||||||| ||||| || |||||||||||||| |||||||||| ||| ||
Sbjct: 475 gagctgtggcaggttaagtcaggaacgttgtttgacaacattctcatcactgacgatgct 416
Query: 186 gcgttggccaagacttttgcagaggagacatggggcaagcacaaggaggcagagaagact 245
|| ||||||||||| ||||| || ||||| |||| |||||||||||| || |||||| ||
Sbjct: 415 gctttggccaagacatttgccgaagagacctgggccaagcacaaggatgctgagaaggct 356
Query: 246 gctttcgatgaggctgagaaaaagaaggaagaagagga 283
||||| || |||||||| || ||||||||||| |||||
Sbjct: 355 gcttttgacgaggctgaaaagaagaaggaagaggagga 318
>gb|BM816375.1|BM816375 HC03G10_T3.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC03G10_T3.ab1 similar to CALRETICULIN PRECURSOR
gi|6682833|dbj|BAA88900.1| (AB021259) calcium-binding
protein [Oryza sativa], mRNA sequence
Length = 655
Score = 297 bits (150), Expect = 3e-079
Identities = 246/278 (88%)
Strand = Plus / Plus
Query: 6 caaaagaaaatcaagaaccctaactaccagggtaaatggaaggcacctatgattgacaac 65
|||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 8 caaaagaaaatcaagaaccctaactaccagggcaaatggaaggcacctatgattgccaac 67
Query: 66 ccagatttcaaggatgatccgtacatttatgcatttgacagcctgaaatacattggcatt 125
||||| ||| |||||||||| ||||| || || |||||||||||||| |||||||| ||
Sbjct: 68 ccagacttccaggatgatccttacatctacgcttttgacagcctgaagtacattggaatc 127
Query: 126 gagctgtggcaggttaaatcaggcactttgtttgacaacatcatcatcactgatgatcct 185
||||||||||||||||| ||||| || |||||||||||||| |||||||||| ||| ||
Sbjct: 128 gagctgtggcaggttaagtcaggaacgttgtttgacaacattctcatcactgacgatgct 187
Query: 186 gcgttggccaagacttttgcagaggagacatggggcaagcacaaggaggcagagaagact 245
|| ||||||||||| ||||| || ||||| |||| |||||||||||| || |||||| ||
Sbjct: 188 gctttggccaagacatttgccgaagagacctgggccaagcacaaggatgctgagaaggct 247
Query: 246 gctttcgatgaggctgagaaaaagaaggaagaagagga 283
||||| || |||||||| || ||||||||||| |||||
Sbjct: 248 gcttttgacgaggctgaaaagaagaaggaagaggagga 285
>gb|BQ458938.1|BQ458938 HA02M18r HA Hordeum vulgare subsp. vulgare cDNA clone HA02M18
5-PRIME, mRNA sequence
Length = 659
Score = 297 bits (150), Expect = 3e-079
Identities = 246/278 (88%)
Strand = Plus / Plus
Query: 6 caaaagaaaatcaagaaccctaactaccagggtaaatggaaggcacctatgattgacaac 65
|||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 252 caaaagaaaatcaagaaccctaactaccagggcaaatggaaggcacctatgattgccaac 311
Query: 66 ccagatttcaaggatgatccgtacatttatgcatttgacagcctgaaatacattggcatt 125
||||| ||| |||||||||| ||||| || || |||||||||||||| |||||||| ||
Sbjct: 312 ccagacttccaggatgatccttacatctacgcttttgacagcctgaagtacattggaatc 371
Query: 126 gagctgtggcaggttaaatcaggcactttgtttgacaacatcatcatcactgatgatcct 185
||||||||||||||||| ||||| || |||||||||||||| |||||||||| ||| ||
Sbjct: 372 gagctgtggcaggttaagtcaggaacgttgtttgacaacattctcatcactgacgatgct 431
Query: 186 gcgttggccaagacttttgcagaggagacatggggcaagcacaaggaggcagagaagact 245
|| ||||||||||| ||||| || ||||| |||| |||||||||||| || |||||| ||
Sbjct: 432 gctttggccaagacatttgccgaagagacctgggccaagcacaaggatgctgagaaggct 491
Query: 246 gctttcgatgaggctgagaaaaagaaggaagaagagga 283
||||| || |||||||| || ||||||||||| |||||
Sbjct: 492 gcttttgacgaggctgaaaagaagaaggaagaggagga 529
>gb|BI780112.2|BI780112 EBma08_SQ001_H01_R maternal, 28 DPA, no treatment, cv Optic, EBma08
Hordeum vulgare subsp. vulgare cDNA clone
EBma08_SQ001_H01 5', mRNA sequence
Length = 626
Score = 297 bits (150), Expect = 3e-079
Identities = 246/278 (88%)
Strand = Plus / Plus
Query: 6 caaaagaaaatcaagaaccctaactaccagggtaaatggaaggcacctatgattgacaac 65
|||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 52 caaaagaaaatcaagaaccctaactaccagggcaaatggaaggcacctatgattgccaac 111
Query: 66 ccagatttcaaggatgatccgtacatttatgcatttgacagcctgaaatacattggcatt 125
||||| ||| |||||||||| ||||| || || |||||||||||||| |||||||| ||
Sbjct: 112 ccagacttccaggatgatccttacatctacgcttttgacagcctgaagtacattggaatc 171
Query: 126 gagctgtggcaggttaaatcaggcactttgtttgacaacatcatcatcactgatgatcct 185
||||||||||||||||| ||||| || |||||||||||||| |||||||||| ||| ||
Sbjct: 172 gagctgtggcaggttaagtcaggaacgttgtttgacaacattctcatcactgacgatgct 231
Query: 186 gcgttggccaagacttttgcagaggagacatggggcaagcacaaggaggcagagaagact 245
|| ||||||||||| ||||| || ||||| |||| |||||||||||| || |||||| ||
Sbjct: 232 gctttggccaagacatttgccgaagagacctgggccaagcacaaggatgctgagaaggct 291
Query: 246 gctttcgatgaggctgagaaaaagaaggaagaagagga 283
||||| || |||||||| || ||||||||||| |||||
Sbjct: 292 gcttttgacgaggctgaaaagaagaaggaagaggagga 329
>gb|BM098005.2|BM098005 EBpi03_SQ002_E14_R pistil, 4 DPA, no treatment, cv Optic, EBpi03
Hordeum vulgare subsp. vulgare cDNA clone
EBpi03_SQ002_E14 5', mRNA sequence
Length = 556
Score = 297 bits (150), Expect = 3e-079
Identities = 246/278 (88%)
Strand = Plus / Plus
Query: 6 caaaagaaaatcaagaaccctaactaccagggtaaatggaaggcacctatgattgacaac 65
|||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 213 caaaagaaaatcaagaaccctaactaccagggcaaatggaaggcacctatgattgccaac 272
Query: 66 ccagatttcaaggatgatccgtacatttatgcatttgacagcctgaaatacattggcatt 125
||||| ||| |||||||||| ||||| || || |||||||||||||| |||||||| ||
Sbjct: 273 ccagacttccaggatgatccttacatctacgcttttgacagcctgaagtacattggaatc 332
Query: 126 gagctgtggcaggttaaatcaggcactttgtttgacaacatcatcatcactgatgatcct 185
||||||||||||||||| ||||| || |||||||||||||| |||||||||| ||| ||
Sbjct: 333 gagctgtggcaggttaagtcaggaacgttgtttgacaacattctcatcactgacgatgct 392
Query: 186 gcgttggccaagacttttgcagaggagacatggggcaagcacaaggaggcagagaagact 245
|| ||||||||||| ||||| || ||||| |||| |||||||||||| || |||||| ||
Sbjct: 393 gctttggccaagacatttgccgaagagacctgggccaagcacaaggatgctgagaaggct 452
Query: 246 gctttcgatgaggctgagaaaaagaaggaagaagagga 283
||||| || |||||||| || ||||||||||| |||||
Sbjct: 453 gcttttgacgaggctgaaaagaagaaggaagaggagga 490
>gb|BM098140.2|BM098140 EBpi03_SQ002_K16_R pistil, 4 DPA, no treatment, cv Optic, EBpi03
Hordeum vulgare subsp. vulgare cDNA clone
EBpi03_SQ002_K16 5', mRNA sequence
Length = 609
Score = 297 bits (150), Expect = 3e-079
Identities = 246/278 (88%)
Strand = Plus / Plus
Query: 6 caaaagaaaatcaagaaccctaactaccagggtaaatggaaggcacctatgattgacaac 65
|||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 158 caaaagaaaatcaagaaccctaactaccagggcaaatggaaggcacctatgattgccaac 217
Query: 66 ccagatttcaaggatgatccgtacatttatgcatttgacagcctgaaatacattggcatt 125
||||| ||| |||||||||| ||||| || || |||||||||||||| |||||||| ||
Sbjct: 218 ccagacttccaggatgatccttacatctacgcttttgacagcctgaagtacattggaatc 277
Query: 126 gagctgtggcaggttaaatcaggcactttgtttgacaacatcatcatcactgatgatcct 185
||||||||||||||||| ||||| || |||||||||||||| |||||||||| ||| ||
Sbjct: 278 gagctgtggcaggttaagtcaggaacgttgtttgacaacattctcatcactgacgatgct 337
Query: 186 gcgttggccaagacttttgcagaggagacatggggcaagcacaaggaggcagagaagact 245
|| ||||||||||| ||||| || ||||| |||| |||||||||||| || |||||| ||
Sbjct: 338 gctttggccaagacatttgccgaagagacctgggccaagcacaaggatgctgagaaggct 397
Query: 246 gctttcgatgaggctgagaaaaagaaggaagaagagga 283
||||| || |||||||| || ||||||||||| |||||
Sbjct: 398 gcttttgacgaggctgaaaagaagaaggaagaggagga 435
Score = 42.1 bits (21), Expect = 0.025
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 366 tctgatgccgaggatgacaaggactctga 394
|||||||| |||||||||||||| |||||
Sbjct: 516 tctgatgctgaggatgacaaggattctga 544
>gb|BU968593.1|BU968593 HB08A02r BC Hordeum vulgare subsp. vulgare cDNA clone HB08A02
5-PRIME, mRNA sequence
Length = 536
Score = 297 bits (150), Expect = 3e-079
Identities = 246/278 (88%)
Strand = Plus / Plus
Query: 6 caaaagaaaatcaagaaccctaactaccagggtaaatggaaggcacctatgattgacaac 65
|||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 81 caaaagaaaatcaagaaccctaactaccagggcaaatggaaggcacctatgattgccaac 140
Query: 66 ccagatttcaaggatgatccgtacatttatgcatttgacagcctgaaatacattggcatt 125
||||| ||| |||||||||| ||||| || || |||||||||||||| |||||||| ||
Sbjct: 141 ccagacttccaggatgatccttacatctacgcttttgacagcctgaagtacattggaatc 200
Query: 126 gagctgtggcaggttaaatcaggcactttgtttgacaacatcatcatcactgatgatcct 185
||||||||||||||||| ||||| || |||||||||||||| |||||||||| ||| ||
Sbjct: 201 gagctgtggcaggttaagtcaggaacgttgtttgacaacattctcatcactgacgatgct 260
Query: 186 gcgttggccaagacttttgcagaggagacatggggcaagcacaaggaggcagagaagact 245
|| ||||||||||| ||||| || ||||| |||| |||||||||||| || |||||| ||
Sbjct: 261 gctttggccaagacatttgccgaagagacctgggccaagcacaaggatgctgagaaggct 320
Query: 246 gctttcgatgaggctgagaaaaagaaggaagaagagga 283
||||| || |||||||| || ||||||||||| |||||
Sbjct: 321 gcttttgacgaggctgaaaagaagaaggaagaggagga 358
>gb|BJ548694.1|BJ548694 BJ548694 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal33e06 3', mRNA sequence
Length = 677
Score = 297 bits (150), Expect = 3e-079
Identities = 246/278 (88%)
Strand = Plus / Minus
Query: 6 caaaagaaaatcaagaaccctaactaccagggtaaatggaaggcacctatgattgacaac 65
|||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 628 caaaagaaaatcaagaaccctaactaccagggcaaatggaaggcacctatgattgccaac 569
Query: 66 ccagatttcaaggatgatccgtacatttatgcatttgacagcctgaaatacattggcatt 125
||||| ||| |||||||||| ||||| || || |||||||||||||| |||||||| ||
Sbjct: 568 ccagacttccaggatgatccttacatctacgcttttgacagcctgaagtacattggaatc 509
Query: 126 gagctgtggcaggttaaatcaggcactttgtttgacaacatcatcatcactgatgatcct 185
||||||||||||||||| ||||| || |||||||||||||| |||||||||| ||| ||
Sbjct: 508 gagctgtggcaggttaagtcaggaacgttgtttgacaacattctcatcactgacgatgct 449
Query: 186 gcgttggccaagacttttgcagaggagacatggggcaagcacaaggaggcagagaagact 245
|| ||||||||||| ||||| || ||||| |||| |||||||||||| || |||||| ||
Sbjct: 448 gctttggccaagacatttgccgaagagacctgggccaagcacaaggatgctgagaaggct 389
Query: 246 gctttcgatgaggctgagaaaaagaaggaagaagagga 283
||||| || |||||||| || ||||||||||| |||||
Sbjct: 388 gcttttgacgaggctgaaaagaagaaggaagaggagga 351
>gb|BJ549338.1|BJ549338 BJ549338 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags30o22 5', mRNA sequence
Length = 695
Score = 297 bits (150), Expect = 3e-079
Identities = 246/278 (88%)
Strand = Plus / Plus
Query: 6 caaaagaaaatcaagaaccctaactaccagggtaaatggaaggcacctatgattgacaac 65
|||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 263 caaaagaaaatcaagaaccctaactaccagggcaaatggaaggcacctatgattgccaac 322
Query: 66 ccagatttcaaggatgatccgtacatttatgcatttgacagcctgaaatacattggcatt 125
||||| ||| |||||||||| ||||| || || |||||||||||||| |||||||| ||
Sbjct: 323 ccagacttccaggatgatccttacatctacgcttttgacagcctgaagtacattggaatc 382
Query: 126 gagctgtggcaggttaaatcaggcactttgtttgacaacatcatcatcactgatgatcct 185
||||||||||||||||| ||||| || |||||||||||||| |||||||||| ||| ||
Sbjct: 383 gagctgtggcaggttaagtcaggaacgttgtttgacaacattctcatcactgacgatgct 442
Query: 186 gcgttggccaagacttttgcagaggagacatggggcaagcacaaggaggcagagaagact 245
|| ||||||||||| ||||| || ||||| |||| |||||||||||| || |||||| ||
Sbjct: 443 gctttggccaagacatttgccgaagagacctgggccaagcacaaggatgctgagaaggct 502
Query: 246 gctttcgatgaggctgagaaaaagaaggaagaagagga 283
||||| || |||||||| || ||||||||||| |||||
Sbjct: 503 gcttttgacgaggctgaaaagaagaaggaagaggagga 540
>gb|BJ549789.1|BJ549789 BJ549789 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags32e05 3', mRNA sequence
Length = 629
Score = 297 bits (150), Expect = 3e-079
Identities = 246/278 (88%)
Strand = Plus / Minus
Query: 6 caaaagaaaatcaagaaccctaactaccagggtaaatggaaggcacctatgattgacaac 65
|||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 583 caaaagaaaatcaagaaccctaactaccagggcaaatggaaggcacctatgattgccaac 524
Query: 66 ccagatttcaaggatgatccgtacatttatgcatttgacagcctgaaatacattggcatt 125
||||| ||| |||||||||| ||||| || || |||||||||||||| |||||||| ||
Sbjct: 523 ccagacttccaggatgatccttacatctacgcttttgacagcctgaagtacattggaatc 464
Query: 126 gagctgtggcaggttaaatcaggcactttgtttgacaacatcatcatcactgatgatcct 185
||||||||||||||||| ||||| || |||||||||||||| |||||||||| ||| ||
Sbjct: 463 gagctgtggcaggttaagtcaggaacgttgtttgacaacattctcatcactgacgatgct 404
Query: 186 gcgttggccaagacttttgcagaggagacatggggcaagcacaaggaggcagagaagact 245
|| ||||||||||| ||||| || ||||| |||| |||||||||||| || |||||| ||
Sbjct: 403 gctttggccaagacatttgccgaagagacctgggccaagcacaaggatgctgagaaggct 344
Query: 246 gctttcgatgaggctgagaaaaagaaggaagaagagga 283
||||| || |||||||| || ||||||||||| |||||
Sbjct: 343 gcttttgacgaggctgaaaagaagaaggaagaggagga 306
>gb|BJ549790.1|BJ549790 BJ549790 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags32e06 3', mRNA sequence
Length = 666
Score = 297 bits (150), Expect = 3e-079
Identities = 246/278 (88%)
Strand = Plus / Minus
Query: 6 caaaagaaaatcaagaaccctaactaccagggtaaatggaaggcacctatgattgacaac 65
|||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 627 caaaagaaaatcaagaaccctaactaccagggcaaatggaaggcacctatgattgccaac 568
Query: 66 ccagatttcaaggatgatccgtacatttatgcatttgacagcctgaaatacattggcatt 125
||||| ||| |||||||||| ||||| || || |||||||||||||| |||||||| ||
Sbjct: 567 ccagacttccaggatgatccttacatctacgcttttgacagcctgaagtacattggaatc 508
Query: 126 gagctgtggcaggttaaatcaggcactttgtttgacaacatcatcatcactgatgatcct 185
||||||||||||||||| ||||| || |||||||||||||| |||||||||| ||| ||
Sbjct: 507 gagctgtggcaggttaagtcaggaacgttgtttgacaacattctcatcactgacgatgct 448
Query: 186 gcgttggccaagacttttgcagaggagacatggggcaagcacaaggaggcagagaagact 245
|| ||||||||||| ||||| || ||||| |||| |||||||||||| || |||||| ||
Sbjct: 447 gctttggccaagacatttgccgaagagacctgggccaagcacaaggatgctgagaaggct 388
Query: 246 gctttcgatgaggctgagaaaaagaaggaagaagagga 283
||||| || |||||||| || ||||||||||| |||||
Sbjct: 387 gcttttgacgaggctgaaaagaagaaggaagaggagga 350
>gb|BJ549815.1|BJ549815 BJ549815 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags32p16 3', mRNA sequence
Length = 663
Score = 297 bits (150), Expect = 3e-079
Identities = 246/278 (88%)
Strand = Plus / Minus
Query: 6 caaaagaaaatcaagaaccctaactaccagggtaaatggaaggcacctatgattgacaac 65
|||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 627 caaaagaaaatcaagaaccctaactaccagggcaaatggaaggcacctatgattgccaac 568
Query: 66 ccagatttcaaggatgatccgtacatttatgcatttgacagcctgaaatacattggcatt 125
||||| ||| |||||||||| ||||| || || |||||||||||||| |||||||| ||
Sbjct: 567 ccagacttccaggatgatccttacatctacgcttttgacagcctgaagtacattggaatc 508
Query: 126 gagctgtggcaggttaaatcaggcactttgtttgacaacatcatcatcactgatgatcct 185
||||||||||||||||| ||||| || |||||||||||||| |||||||||| ||| ||
Sbjct: 507 gagctgtggcaggttaagtcaggaacgttgtttgacaacattctcatcactgacgatgct 448
Query: 186 gcgttggccaagacttttgcagaggagacatggggcaagcacaaggaggcagagaagact 245
|| ||||||||||| ||||| || ||||| |||| |||||||||||| || |||||| ||
Sbjct: 447 gctttggccaagacatttgccgaagagacctgggccaagcacaaggatgctgagaaggct 388
Query: 246 gctttcgatgaggctgagaaaaagaaggaagaagagga 283
||||| || |||||||| || ||||||||||| |||||
Sbjct: 387 gcttttgacgaggctgaaaagaagaaggaagaggagga 350
>gb|BJ549858.1|BJ549858 BJ549858 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags34a08 3', mRNA sequence
Length = 648
Score = 297 bits (150), Expect = 3e-079
Identities = 246/278 (88%)
Strand = Plus / Minus
Query: 6 caaaagaaaatcaagaaccctaactaccagggtaaatggaaggcacctatgattgacaac 65
|||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 610 caaaagaaaatcaagaaccctaactaccagggcaaatggaaggcacctatgattgccaac 551
Query: 66 ccagatttcaaggatgatccgtacatttatgcatttgacagcctgaaatacattggcatt 125
||||| ||| |||||||||| ||||| || || |||||||||||||| |||||||| ||
Sbjct: 550 ccagacttccaggatgatccttacatctacgcttttgacagcctgaagtacattggaatc 491
Query: 126 gagctgtggcaggttaaatcaggcactttgtttgacaacatcatcatcactgatgatcct 185
||||||||||||||||| ||||| || |||||||||||||| |||||||||| ||| ||
Sbjct: 490 gagctgtggcaggttaagtcaggaacgttgtttgacaacattctcatcactgacgatgct 431
Query: 186 gcgttggccaagacttttgcagaggagacatggggcaagcacaaggaggcagagaagact 245
|| ||||||||||| ||||| || ||||| |||| |||||||||||| || |||||| ||
Sbjct: 430 gctttggccaagacatttgccgaagagacctgggccaagcacaaggatgctgagaaggct 371
Query: 246 gctttcgatgaggctgagaaaaagaaggaagaagagga 283
||||| || |||||||| || ||||||||||| |||||
Sbjct: 370 gcttttgacgaggctgaaaagaagaaggaagaggagga 333
>gb|BJ549905.1|BJ549905 BJ549905 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags35o18 3', mRNA sequence
Length = 818
Score = 297 bits (150), Expect = 3e-079
Identities = 246/278 (88%)
Strand = Plus / Minus
Query: 6 caaaagaaaatcaagaaccctaactaccagggtaaatggaaggcacctatgattgacaac 65
|||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 596 caaaagaaaatcaagaaccctaactaccagggcaaatggaaggcacctatgattgccaac 537
Query: 66 ccagatttcaaggatgatccgtacatttatgcatttgacagcctgaaatacattggcatt 125
||||| ||| |||||||||| ||||| || || |||||||||||||| |||||||| ||
Sbjct: 536 ccagacttccaggatgatccttacatctacgcttttgacagcctgaagtacattggaatc 477
Query: 126 gagctgtggcaggttaaatcaggcactttgtttgacaacatcatcatcactgatgatcct 185
||||||||||||||||| ||||| || |||||||||||||| |||||||||| ||| ||
Sbjct: 476 gagctgtggcaggttaagtcaggaacgttgtttgacaacattctcatcactgacgatgct 417
Query: 186 gcgttggccaagacttttgcagaggagacatggggcaagcacaaggaggcagagaagact 245
|| ||||||||||| ||||| || ||||| |||| |||||||||||| || |||||| ||
Sbjct: 416 gctttggccaagacatttgccgaagagacctgggccaagcacaaggatgctgagaaggct 357
Query: 246 gctttcgatgaggctgagaaaaagaaggaagaagagga 283
||||| || |||||||| || ||||||||||| |||||
Sbjct: 356 gcttttgacgaggctgaaaagaagaaggaagaggagga 319
>gb|BJ550091.1|BJ550091 BJ550091 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags30o22 3', mRNA sequence
Length = 643
Score = 297 bits (150), Expect = 3e-079
Identities = 246/278 (88%)
Strand = Plus / Minus
Query: 6 caaaagaaaatcaagaaccctaactaccagggtaaatggaaggcacctatgattgacaac 65
|||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 594 caaaagaaaatcaagaaccctaactaccagggcaaatggaaggcacctatgattgccaac 535
Query: 66 ccagatttcaaggatgatccgtacatttatgcatttgacagcctgaaatacattggcatt 125
||||| ||| |||||||||| ||||| || || |||||||||||||| |||||||| ||
Sbjct: 534 ccagacttccaggatgatccttacatctacgcttttgacagcctgaagtacattggaatc 475
Query: 126 gagctgtggcaggttaaatcaggcactttgtttgacaacatcatcatcactgatgatcct 185
||||||||||||||||| ||||| || |||||||||||||| |||||||||| ||| ||
Sbjct: 474 gagctgtggcaggttaagtcaggaacgttgtttgacaacattctcatcactgacgatgct 415
Query: 186 gcgttggccaagacttttgcagaggagacatggggcaagcacaaggaggcagagaagact 245
|| ||||||||||| ||||| || ||||| |||| |||||||||||| || |||||| ||
Sbjct: 414 gctttggccaagacatttgccgaagagacctgggccaagcacaaggatgctgagaaggct 355
Query: 246 gctttcgatgaggctgagaaaaagaaggaagaagagga 283
||||| || |||||||| || ||||||||||| |||||
Sbjct: 354 gcttttgacgaggctgaaaagaagaaggaagaggagga 317
>gb|BJ550219.1|BJ550219 BJ550219 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags39o09 3', mRNA sequence
Length = 671
Score = 297 bits (150), Expect = 3e-079
Identities = 246/278 (88%)
Strand = Plus / Minus
Query: 6 caaaagaaaatcaagaaccctaactaccagggtaaatggaaggcacctatgattgacaac 65
|||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 609 caaaagaaaatcaagaaccctaactaccagggcaaatggaaggcacctatgattgccaac 550
Query: 66 ccagatttcaaggatgatccgtacatttatgcatttgacagcctgaaatacattggcatt 125
||||| ||| |||||||||| ||||| || || |||||||||||||| |||||||| ||
Sbjct: 549 ccagacttccaggatgatccttacatctacgcttttgacagcctgaagtacattggaatc 490
Query: 126 gagctgtggcaggttaaatcaggcactttgtttgacaacatcatcatcactgatgatcct 185
||||||||||||||||| ||||| || |||||||||||||| |||||||||| ||| ||
Sbjct: 489 gagctgtggcaggttaagtcaggaacgttgtttgacaacattctcatcactgacgatgct 430
Query: 186 gcgttggccaagacttttgcagaggagacatggggcaagcacaaggaggcagagaagact 245
|| ||||||||||| ||||| || ||||| |||| |||||||||||| || |||||| ||
Sbjct: 429 gctttggccaagacatttgccgaagagacctgggccaagcacaaggatgctgagaaggct 370
Query: 246 gctttcgatgaggctgagaaaaagaaggaagaagagga 283
||||| || |||||||| || ||||||||||| |||||
Sbjct: 369 gcttttgacgaggctgaaaagaagaaggaagaggagga 332
>gb|CK122467.1|CK122467 BES1824103j11 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010J113 5-PRIME, mRNA sequence
Length = 782
Score = 297 bits (150), Expect = 3e-079
Identities = 246/278 (88%)
Strand = Plus / Plus
Query: 6 caaaagaaaatcaagaaccctaactaccagggtaaatggaaggcacctatgattgacaac 65
|||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 106 caaaagaaaatcaagaaccctaactaccagggcaaatggaaggcacctatgattgccaac 165
Query: 66 ccagatttcaaggatgatccgtacatttatgcatttgacagcctgaaatacattggcatt 125
||||| ||| |||||||||| ||||| || || |||||||||||||| |||||||| ||
Sbjct: 166 ccagacttccaggatgatccttacatctacgcttttgacagcctgaagtacattggaatc 225
Query: 126 gagctgtggcaggttaaatcaggcactttgtttgacaacatcatcatcactgatgatcct 185
||||||||||||||||| ||||| || |||||||||||||| |||||||||| ||| ||
Sbjct: 226 gagctgtggcaggttaagtcaggaacgttgtttgacaacattctcatcactgacgatgct 285
Query: 186 gcgttggccaagacttttgcagaggagacatggggcaagcacaaggaggcagagaagact 245
|| ||||||||||| ||||| || ||||| |||| |||||||||||| || |||||| ||
Sbjct: 286 gctttggccaagacatttgccgaagagacctgggccaagcacaaggatgctgagaaggct 345
Query: 246 gctttcgatgaggctgagaaaaagaaggaagaagagga 283
||||| || |||||||| || ||||||||||| |||||
Sbjct: 346 gcttttgacgaggctgaaaagaagaaggaagaggagga 383
>gb|CK122717.1|CK122717 BES1824105i24 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010I245 5-PRIME, mRNA sequence
Length = 781
Score = 297 bits (150), Expect = 3e-079
Identities = 246/278 (88%)
Strand = Plus / Plus
Query: 6 caaaagaaaatcaagaaccctaactaccagggtaaatggaaggcacctatgattgacaac 65
|||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 391 caaaagaaaatcaagaaccctaactaccagggcaaatggaaggcacctatgattgccaac 450
Query: 66 ccagatttcaaggatgatccgtacatttatgcatttgacagcctgaaatacattggcatt 125
||||| ||| |||||||||| ||||| || || |||||||||||||| |||||||| ||
Sbjct: 451 ccagacttccaggatgatccttacatctacgcttttgacagcctgaagtacattggaatc 510
Query: 126 gagctgtggcaggttaaatcaggcactttgtttgacaacatcatcatcactgatgatcct 185
||||||||||||||||| ||||| || |||||||||||||| |||||||||| ||| ||
Sbjct: 511 gagctgtggcaggttaagtcaggaacgttgtttgacaacattctcatcactgacgatgct 570
Query: 186 gcgttggccaagacttttgcagaggagacatggggcaagcacaaggaggcagagaagact 245
|| ||||||||||| ||||| || ||||| |||| |||||||||||| || |||||| ||
Sbjct: 571 gctttggccaagacatttgccgaagagacctgggccaagcacaaggatgctgagaaggct 630
Query: 246 gctttcgatgaggctgagaaaaagaaggaagaagagga 283
||||| || |||||||| || ||||||||||| |||||
Sbjct: 631 gcttttgacgaggctgaaaagaagaaggaagaggagga 668
>gb|CK124596.1|CK124596 BES1824109l18 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010L189 5-PRIME, mRNA sequence
Length = 792
Score = 297 bits (150), Expect = 3e-079
Identities = 246/278 (88%)
Strand = Plus / Plus
Query: 6 caaaagaaaatcaagaaccctaactaccagggtaaatggaaggcacctatgattgacaac 65
|||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 409 caaaagaaaatcaagaaccctaactaccagggcaaatggaaggcacctatgattgccaac 468
Query: 66 ccagatttcaaggatgatccgtacatttatgcatttgacagcctgaaatacattggcatt 125
||||| ||| |||||||||| ||||| || || |||||||||||||| |||||||| ||
Sbjct: 469 ccagacttccaggatgatccttacatctacgcttttgacagcctgaagtacattggaatc 528
Query: 126 gagctgtggcaggttaaatcaggcactttgtttgacaacatcatcatcactgatgatcct 185
||||||||||||||||| ||||| || |||||||||||||| |||||||||| ||| ||
Sbjct: 529 gagctgtggcaggttaagtcaggaacgttgtttgacaacattctcatcactgacgatgct 588
Query: 186 gcgttggccaagacttttgcagaggagacatggggcaagcacaaggaggcagagaagact 245
|| ||||||||||| ||||| || ||||| |||| |||||||||||| || |||||| ||
Sbjct: 589 gctttggccaagacatttgccgaagagacctgggccaagcacaaggatgctgagaaggct 648
Query: 246 gctttcgatgaggctgagaaaaagaaggaagaagagga 283
||||| || |||||||| || ||||||||||| |||||
Sbjct: 649 gcttttgacgaggctgaaaagaagaaggaagaggagga 686
>gb|L27348.1|BLYCRH1A Hordeum vulgare calreticulin (CRH1) mRNA, partial cds
Length = 1472
Score = 297 bits (150), Expect = 3e-079
Identities = 246/278 (88%)
Strand = Plus / Plus
Query: 6 caaaagaaaatcaagaaccctaactaccagggtaaatggaaggcacctatgattgacaac 65
|||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 831 caaaagaaaatcaagaaccctaactaccagggcaaatggaaggcacctatgattgccaac 890
Query: 66 ccagatttcaaggatgatccgtacatttatgcatttgacagcctgaaatacattggcatt 125
||||| ||| |||||||||| ||||| || || |||||||||||||| |||||||| ||
Sbjct: 891 ccagacttccaggatgatccttacatctacgcttttgacagcctgaagtacattggaatc 950
Query: 126 gagctgtggcaggttaaatcaggcactttgtttgacaacatcatcatcactgatgatcct 185
||||||||||||||||| ||||| || |||||||||||||| |||||||||| ||| ||
Sbjct: 951 gagctgtggcaggttaagtcaggaacgttgtttgacaacattctcatcactgacgatgct 1010
Query: 186 gcgttggccaagacttttgcagaggagacatggggcaagcacaaggaggcagagaagact 245
|| ||||||||||| ||||| || ||||| |||| |||||||||||| || |||||| ||
Sbjct: 1011 gctttggccaagacatttgccgaagagacctgggccaagcacaaggatgctgagaaggct 1070
Query: 246 gctttcgatgaggctgagaaaaagaaggaagaagagga 283
||||| || |||||||| || ||||||||||| |||||
Sbjct: 1071 gcttttgacgaggctgaaaagaagaaggaagaggagga 1108
>gb|L27349.1|BLYCRH2A Hordeum vulgare calreticulin (CRH2) mRNA, partial cds
Length = 1450
Score = 297 bits (150), Expect = 3e-079
Identities = 246/278 (88%)
Strand = Plus / Plus
Query: 6 caaaagaaaatcaagaaccctaactaccagggtaaatggaaggcacctatgattgacaac 65
|||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 839 caaaagaaaatcaagaaccctaactaccagggcaaatggaaggcacctatgattgccaac 898
Query: 66 ccagatttcaaggatgatccgtacatttatgcatttgacagcctgaaatacattggcatt 125
||||| ||| |||||||||| ||||| || || |||||||||||||| |||||||| ||
Sbjct: 899 ccagacttccaggatgatccttacatctacgcttttgacagcctgaagtacattggaatc 958
Query: 126 gagctgtggcaggttaaatcaggcactttgtttgacaacatcatcatcactgatgatcct 185
||||||||||||||||| ||||| || |||||||||||||| |||||||||| ||| ||
Sbjct: 959 gagctgtggcaggttaagtcaggaacgttgtttgacaacattctcatcactgacgatgct 1018
Query: 186 gcgttggccaagacttttgcagaggagacatggggcaagcacaaggaggcagagaagact 245
|| ||||||||||| ||||| || ||||| |||| |||||||||||| || |||||| ||
Sbjct: 1019 gctttggccaagacatttgccgaagagacctgggccaagcacaaggatgctgagaaggct 1078
Query: 246 gctttcgatgaggctgagaaaaagaaggaagaagagga 283
||||| || |||||||| || ||||||||||| |||||
Sbjct: 1079 gcttttgacgaggctgaaaagaagaaggaagaggagga 1116
>gb|BQ458831.1|BQ458831 HA04B09r HA Hordeum vulgare subsp. vulgare cDNA clone HA04B09
5-PRIME, mRNA sequence
Length = 656
Score = 291 bits (147), Expect = 2e-077
Identities = 245/278 (88%)
Strand = Plus / Plus
Query: 6 caaaagaaaatcaagaaccctaactaccagggtaaatggaaggcacctatgattgacaac 65
|||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 251 caaaagaaaatcaagaaccctaactaccagggcaaatggaaggcacctatgattgccaac 310
Query: 66 ccagatttcaaggatgatccgtacatttatgcatttgacagcctgaaatacattggcatt 125
||||| ||| |||||||||| ||||| || || |||||||||||||| |||||||| ||
Sbjct: 311 ccagacttccaggatgatccttacatctacgcttttgacagcctgaagtacattggaatc 370
Query: 126 gagctgtggcaggttaaatcaggcactttgtttgacaacatcatcatcactgatgatcct 185
||||||||||||||||| ||||| || |||||||||||||| |||||||||| ||| ||
Sbjct: 371 gagctgtggcaggttaagtcaggaacgttgtttgacaacattctcatcactgacgatgct 430
Query: 186 gcgttggccaagacttttgcagaggagacatggggcaagcacaaggaggcagagaagact 245
|| ||||||||||| ||||| || ||||| || | |||||||||||| || |||||| ||
Sbjct: 431 gctttggccaagacatttgccgaagagacctgngccaagcacaaggatgctgagaaggct 490
Query: 246 gctttcgatgaggctgagaaaaagaaggaagaagagga 283
||||| || |||||||| || ||||||||||| |||||
Sbjct: 491 gcttttgacgaggctgaaaagaagaaggaagaggagga 528
>gb|BU972665.1|BU972665 HB22F20r BC Hordeum vulgare subsp. vulgare cDNA clone HB22F20
5-PRIME, mRNA sequence
Length = 478
Score = 291 bits (147), Expect = 2e-077
Identities = 245/278 (88%)
Strand = Plus / Plus
Query: 6 caaaagaaaatcaagaaccctaactaccagggtaaatggaaggcacctatgattgacaac 65
|||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 134 caaaagaaaatcaagaaccctaactaccagggcaaatggaaggcacctatgattgccaac 193
Query: 66 ccagatttcaaggatgatccgtacatttatgcatttgacagcctgaaatacattggcatt 125
||||| ||| |||||||||| ||||| || || |||||||||||||| |||||||| ||
Sbjct: 194 ccagacttccaggatgatccttacatctacgcttttgacagcctgaagtacattggaatc 253
Query: 126 gagctgtggcaggttaaatcaggcactttgtttgacaacatcatcatcactgatgatcct 185
||||||||||||||||| ||||| || |||||||||||||| |||||||||| ||| ||
Sbjct: 254 gagctgtggcaggttaagtcaggaacgttgtttgacaacattctcatcactgacgatgct 313
Query: 186 gcgttggccaagacttttgcagaggagacatggggcaagcacaaggaggcagagaagact 245
|| ||||||||||| ||||| || ||||| || | |||||||||||| || |||||| ||
Sbjct: 314 gctttggccaagacatttgccgaagagacctgngccaagcacaaggatgctgagaaggct 373
Query: 246 gctttcgatgaggctgagaaaaagaaggaagaagagga 283
||||| || |||||||| || ||||||||||| |||||
Sbjct: 374 gcttttgacgaggctgaaaagaagaaggaagaggagga 411
>gb|BQ459248.1|BQ459248 HA01L24r HA Hordeum vulgare subsp. vulgare cDNA clone HA01L24
5-PRIME, mRNA sequence
Length = 477
Score = 289 bits (146), Expect = 6e-077
Identities = 245/278 (88%)
Strand = Plus / Plus
Query: 6 caaaagaaaatcaagaaccctaactaccagggtaaatggaaggcacctatgattgacaac 65
|||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 13 caaaagaaaatcaagaaccctaactaccagggcaaatggaaggcacctatgattgccaac 72
Query: 66 ccagatttcaaggatgatccgtacatttatgcatttgacagcctgaaatacattggcatt 125
||||| ||| |||||||||| ||||| || || |||||||||||||| |||||||| ||
Sbjct: 73 ccagacttccaggatgatccttacatctacgcttttgacagcctgaagtacattggaatc 132
Query: 126 gagctgtggcaggttaaatcaggcactttgtttgacaacatcatcatcactgatgatcct 185
|||||| |||||||||| ||||| || |||||||||||||| |||||||||| ||| ||
Sbjct: 133 gagctgaggcaggttaagtcaggaacgttgtttgacaacattctcatcactgacgatgct 192
Query: 186 gcgttggccaagacttttgcagaggagacatggggcaagcacaaggaggcagagaagact 245
|| ||||||||||| ||||| || ||||| |||| |||||||||||| || |||||| ||
Sbjct: 193 gctttggccaagacatttgccgaagagacctgggccaagcacaaggatgctgagaaggct 252
Query: 246 gctttcgatgaggctgagaaaaagaaggaagaagagga 283
||||| || |||||||| || ||||||||||| |||||
Sbjct: 253 gcttttgacgaggctgaaaagaagaaggaagaggagga 290
>gb|BQ463263.1|BQ463263 HI04J04r HI Hordeum vulgare subsp. vulgare cDNA clone HI04J04
5-PRIME, mRNA sequence
Length = 500
Score = 289 bits (146), Expect = 6e-077
Identities = 242/274 (88%)
Strand = Plus / Plus
Query: 10 agaaaatcaagaaccctaactaccagggtaaatggaaggcacctatgattgacaacccag 69
|||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||
Sbjct: 11 agaaaatcaagaaccctaactaccagggcaaatggaaggcacctatgattgccaacccag 70
Query: 70 atttcaaggatgatccgtacatttatgcatttgacagcctgaaatacattggcattgagc 129
| ||| |||||||||| ||||| || || |||||||||||||| |||||||| || ||||
Sbjct: 71 acttccaggatgatccttacatctacgcttttgacagcctgaagtacattggaatcgagc 130
Query: 130 tgtggcaggttaaatcaggcactttgtttgacaacatcatcatcactgatgatcctgcgt 189
||||||||||||| ||||| || |||||||||||||| |||||||||| ||| |||| |
Sbjct: 131 tgtggcaggttaagtcaggaacgttgtttgacaacattctcatcactgacgatgctgctt 190
Query: 190 tggccaagacttttgcagaggagacatggggcaagcacaaggaggcagagaagactgctt 249
|||||||||| ||||| || ||||| |||| |||||||||||| || |||||| ||||||
Sbjct: 191 tggccaagacatttgccgaagagacctgggccaagcacaaggatgctgagaaggctgctt 250
Query: 250 tcgatgaggctgagaaaaagaaggaagaagagga 283
| || |||||||| || ||||||||||| |||||
Sbjct: 251 ttgacgaggctgaaaagaagaaggaagaggagga 284
>gb|BM098853.2|BM098853 EBpi05_SQ002_E03_R pistil, 8 DPA, no treatment, cv Optic, EBpi05
Hordeum vulgare subsp. vulgare cDNA clone
EBpi05_SQ002_E03 5', mRNA sequence
Length = 487
Score = 289 bits (146), Expect = 6e-077
Identities = 245/278 (88%)
Strand = Plus / Plus
Query: 6 caaaagaaaatcaagaaccctaactaccagggtaaatggaaggcacctatgattgacaac 65
|||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 204 caaaagaaaatcaagaaccctaactaccagggcaaatggaaggcacctatgattgccaac 263
Query: 66 ccagatttcaaggatgatccgtacatttatgcatttgacagcctgaaatacattggcatt 125
||||| ||| |||||||||| ||||| || || |||||||||||||| |||||||| ||
Sbjct: 264 ccagacttccaggatgatccttacatctacgcttttgacagcctgaagtacattggaatc 323
Query: 126 gagctgtggcaggttaaatcaggcactttgtttgacaacatcatcatcactgatgatcct 185
||||||||||||||||| ||||| || |||||||||||||| |||||||||| ||| ||
Sbjct: 324 gagctgtggcaggttaagtcaggaacgttgtttgacaacattctcatcactgacgatgct 383
Query: 186 gcgttggccaagacttttgcagaggagacatggggcaagcacaaggaggcagagaagact 245
|| ||||||||||| ||||| || ||||| |||| |||||||||||| || |||||| ||
Sbjct: 384 gctttggccaagacatttgccgaagagacctgggccaagcacaaggatgctgagaaggct 443
Query: 246 gctttcgatgaggctgagaaaaagaaggaagaagagga 283
||||| || || ||||| || ||||||||||| |||||
Sbjct: 444 gcttttgacgaagctgaaaagaagaaggaagaggagga 481
>gb|AL504181.1|AL504181 AL504181 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW04H09V 5', mRNA sequence
Length = 700
Score = 287 bits (145), Expect = 3e-076
Identities = 240/272 (88%)
Strand = Plus / Plus
Query: 6 caaaagaaaatcaagaaccctaactaccagggtaaatggaaggcacctatgattgacaac 65
|||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 427 caaaagaaaatcaagaaccctaactaccagggcaaatggaaggcacctatgattgccaac 486
Query: 66 ccagatttcaaggatgatccgtacatttatgcatttgacagcctgaaatacattggcatt 125
||||| ||| |||||||||| ||||| || || |||||||||||||| |||||||| ||
Sbjct: 487 ccagacttccaggatgatccttacatctacgcttttgacagcctgaagtacattggaatc 546
Query: 126 gagctgtggcaggttaaatcaggcactttgtttgacaacatcatcatcactgatgatcct 185
||||||||||||||||| ||||| || |||||||||||||| |||||||||| ||| ||
Sbjct: 547 gagctgtggcaggttaagtcaggaacgttgtttgacaacattctcatcactgacgatgct 606
Query: 186 gcgttggccaagacttttgcagaggagacatggggcaagcacaaggaggcagagaagact 245
|| ||||||||||| ||||| || ||||| |||| |||||||||||| || |||||| ||
Sbjct: 607 gctttggccaagacatttgccgaagagacctgggccaagcacaaggatgctgagaaggct 666
Query: 246 gctttcgatgaggctgagaaaaagaaggaaga 277
||||| || |||||||| || ||||| |||||
Sbjct: 667 gcttttgacgaggctgaaaagaagaangaaga 698
>gb|AV919450.1|AV919450 AV919450 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags6b13 3', mRNA sequence
Length = 570
Score = 283 bits (143), Expect = 4e-075
Identities = 246/279 (88%), Gaps = 1/279 (0%)
Strand = Plus / Minus
Query: 6 caaaagaaaatcaagaaccctaactaccagggtaaatggaaggcacctatgattgacaac 65
|||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 551 caaaagaaaatcaagaaccctaactaccagggcaaatggaaggcacctatgattgccaac 492
Query: 66 ccagatttca-aggatgatccgtacatttatgcatttgacagcctgaaatacattggcat 124
||||| ||| |||||||||| ||||| || || |||||||||||||| |||||||| ||
Sbjct: 491 ccagacttcccaggatgatccttacatctacgcttttgacagcctgaagtacattggaat 432
Query: 125 tgagctgtggcaggttaaatcaggcactttgtttgacaacatcatcatcactgatgatcc 184
||||||||||||||||| ||||| || |||||||||||||| |||||||||| ||| |
Sbjct: 431 cgagctgtggcaggttaagtcaggaacgttgtttgacaacattctcatcactgacgatgc 372
Query: 185 tgcgttggccaagacttttgcagaggagacatggggcaagcacaaggaggcagagaagac 244
||| ||||||||||| ||||| || ||||| |||| |||||||||||| || |||||| |
Sbjct: 371 tgctttggccaagacatttgccgaagagacctgggccaagcacaaggatgctgagaaggc 312
Query: 245 tgctttcgatgaggctgagaaaaagaaggaagaagagga 283
|||||| || |||||||| || ||||||||||| |||||
Sbjct: 311 tgcttttgacgaggctgaaaagaagaaggaagaggagga 273
>gb|AJ460131.1|AJ460131 AJ460131 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200040C08F1, mRNA sequence
Length = 360
Score = 281 bits (142), Expect = 2e-074
Identities = 244/278 (87%)
Strand = Plus / Plus
Query: 6 caaaagaaaatcaagaaccctaactaccagggtaaatggaaggcacctatgattgacaac 65
||||| |||||||| ||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 8 caaaaaaaaatcaaaaaccctaactaccagggcaaatggaaggcacctatgattgccaac 67
Query: 66 ccagatttcaaggatgatccgtacatttatgcatttgacagcctgaaatacattggcatt 125
||||| ||| |||||||||| ||||| | || |||||||||||||| |||||||| |||
Sbjct: 68 ccagacttccaggatgatccttacatctgcgcttttgacagcctgaagtacattggaatt 127
Query: 126 gagctgtggcaggttaaatcaggcactttgtttgacaacatcatcatcactgatgatcct 185
||||||||||||||||| ||||| || |||||||||||||| |||||||||| ||| ||
Sbjct: 128 gagctgtggcaggttaagtcaggaacgttgtttgacaacattctcatcactgacgatgct 187
Query: 186 gcgttggccaagacttttgcagaggagacatggggcaagcacaaggaggcagagaagact 245
|| ||||||||||| ||||| || ||||| |||| |||||||||||| || |||||| ||
Sbjct: 188 gctttggccaagacatttgccgaagagacctgggccaagcacaaggatgctgagaaggct 247
Query: 246 gctttcgatgaggctgagaaaaagaaggaagaagagga 283
||||| || |||||||| || ||||||||||| |||||
Sbjct: 248 gcttttgacgaggctgaaaagaagaaggaagaggagga 285
>gb|BM816374.1|BM816374 HB107C09_SK.ab1 HB Hordeum vulgare subsp. vulgare cDNA clone
HB107C09_SK.ab1 similar to CALRETICULIN PRECURSOR
gi|6682833|dbj|BAA88900.1| (AB021259) calcium-binding
protein [Oryza sativa], mRNA sequence
Length = 934
Score = 280 bits (141), Expect = 6e-074
Identities = 228/257 (88%)
Strand = Plus / Plus
Query: 6 caaaagaaaatcaagaaccctaactaccagggtaaatggaaggcacctatgattgacaac 65
|||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 538 caaaagaaaatcaagaaccctaactaccagggcaaatggaaggcacctatgattgccaac 597
Query: 66 ccagatttcaaggatgatccgtacatttatgcatttgacagcctgaaatacattggcatt 125
||||| ||| |||||||||| ||||| || || |||||||||||||| |||||||| ||
Sbjct: 598 ccagacttccaggatgatccttacatctacgcttttgacagcctgaagtacattggaatc 657
Query: 126 gagctgtggcaggttaaatcaggcactttgtttgacaacatcatcatcactgatgatcct 185
||||||||||||||||| ||||| || |||||||||||||| |||||||||| ||| ||
Sbjct: 658 gagctgtggcaggttaagtcaggaacgttgtttgacaacattctcatcactgacgatgct 717
Query: 186 gcgttggccaagacttttgcagaggagacatggggcaagcacaaggaggcagagaagact 245
|| ||||||||||| ||||| || ||||| |||| |||||||||||| || |||||| ||
Sbjct: 718 gctttggccaagacatttgccgaagagacctgggccaagcacaaggatgctgagaaggct 777
Query: 246 gctttcgatgaggctga 262
||||| || ||||||||
Sbjct: 778 gcttttgacgaggctga 794
>gb|AJ460129.1|AJ460129 AJ460129 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200034G07F2, mRNA sequence
Length = 480
Score = 268 bits (135), Expect = 2e-070
Identities = 231/263 (87%)
Strand = Plus / Plus
Query: 21 aaccctaactaccagggtaaatggaaggcacctatgattgacaacccagatttcaaggat 80
||||||||||||||||| |||||||||||||||||||||| ||||||||| ||| |||||
Sbjct: 5 aaccctaactaccagggcaaatggaaggcacctatgattgccaacccagacttccaggat 64
Query: 81 gatccgtacatttatgcatttgacagcctgaaatacattggcattgagctgtggcaggtt 140
||||| ||||| | || |||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 65 gatccttacatctgcgcttttgacagcctgaagtacattggaattgagctgtggcaggtt 124
Query: 141 aaatcaggcactttgtttgacaacatcatcatcactgatgatcctgcgttggccaagact 200
|| ||||| || |||||||||||||| |||||||||| ||| |||| |||||||||||
Sbjct: 125 aagtcaggaacgttgtttgacaacattctcatcactgacgatgctgctttggccaagaca 184
Query: 201 tttgcagaggagacatggggcaagcacaaggaggcagagaagactgctttcgatgaggct 260
||||| || ||||| |||| |||||||||||| || |||||| ||||||| || ||||||
Sbjct: 185 tttgccgaagagacctgggccaagcacaaggatgctgagaaggctgcttttgacgaggct 244
Query: 261 gagaaaaagaaggaagaagagga 283
|| || ||||||||||| |||||
Sbjct: 245 gaaaagaagaaggaagaggagga 267
>gb|AJ460133.1|AJ460133 AJ460133 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200075A11F1, mRNA sequence
Length = 480
Score = 262 bits (132), Expect = 1e-068
Identities = 228/260 (87%)
Strand = Plus / Plus
Query: 24 cctaactaccagggtaaatggaaggcacctatgattgacaacccagatttcaaggatgat 83
|||||||||||||| |||||||||||||||||||||| ||||||||| ||| ||||||||
Sbjct: 23 cctaactaccagggcaaatggaaggcacctatgattgccaacccagacttccaggatgat 82
Query: 84 ccgtacatttatgcatttgacagcctgaaatacattggcattgagctgtggcaggttaaa 143
|| ||||| | || |||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 83 ccttacatctgcgcttttgacagcctgaagtacattggaattgagctgtggcaggttaag 142
Query: 144 tcaggcactttgtttgacaacatcatcatcactgatgatcctgcgttggccaagactttt 203
||||| || |||||||||||||| |||||||||| ||| |||| ||||||||||| |||
Sbjct: 143 tcaggaacgttgtttgacaacattctcatcactgacgatgctgctttggccaagacattt 202
Query: 204 gcagaggagacatggggcaagcacaaggaggcagagaagactgctttcgatgaggctgag 263
|| || ||||| |||| |||||||||||| || |||||| ||||||| || ||||||||
Sbjct: 203 gccgaagagacctgggccaagcacaaggatgctgagaaggctgcttttgacgaggctgaa 262
Query: 264 aaaaagaaggaagaagagga 283
|| ||||||||||| |||||
Sbjct: 263 aagaagaaggaagaggagga 282
>gb|BJ549268.1|BJ549268 BJ549268 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags32e05 5', mRNA sequence
Length = 593
Score = 260 bits (131), Expect = 6e-068
Identities = 203/227 (89%)
Strand = Plus / Plus
Query: 6 caaaagaaaatcaagaaccctaactaccagggtaaatggaaggcacctatgattgacaac 65
|||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 359 caaaagaaaatcaagaaccctaactaccagggcaaatggaaggcacctatgattgccaac 418
Query: 66 ccagatttcaaggatgatccgtacatttatgcatttgacagcctgaaatacattggcatt 125
||||| ||| |||||||||| ||||| || || |||||||||||||| |||||||| ||
Sbjct: 419 ccagacttccaggatgatccttacatctacgcttttgacagcctgaagtacattggaatc 478
Query: 126 gagctgtggcaggttaaatcaggcactttgtttgacaacatcatcatcactgatgatcct 185
||||||||||||||||| ||||| || |||||||||||||| |||||||||| ||| ||
Sbjct: 479 gagctgtggcaggttaagtcaggaacgttgtttgacaacattctcatcactgacgatgct 538
Query: 186 gcgttggccaagacttttgcagaggagacatggggcaagcacaagga 232
|| ||||||||||| ||||| || ||||| |||| ||||||||||||
Sbjct: 539 gctttggccaagacatttgccgaagagacctgggccaagcacaagga 585
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 90,934
Number of Sequences: 312970
Number of extensions: 90934
Number of successful extensions: 27124
Number of sequences better than 0.5: 146
Number of HSP's better than 0.5 without gapping: 145
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 26671
Number of HSP's gapped (non-prelim): 443
length of query: 725
length of database: 175,134,539
effective HSP length: 19
effective length of query: 706
effective length of database: 169,188,109
effective search space: 119446804954
effective search space used: 119446804954
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)