BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.249
(684 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BG300952.1|BG300952 HVSMEb0019B01f Hordeum vulgare seedl... 394 e-108
gb|BQ768075.1|BQ768075 EBro08_SQ010_J17_R root, 3 week, dro... 394 e-108
gb|BQ462791.1|BQ462791 HI02A08r HI Hordeum vulgare subsp. v... 389 e-107
gb|BE420969.1|BE420969 HWM004.D10 ITEC HWM Barley Leaf Libr... 387 e-106
gb|BE421668.1|BE421668 HWM012cF.03r ITEC HWM Barley Leaf Li... 387 e-106
gb|AL504596.1|AL504596 AL504596 Hordeum vulgare Barke roots... 387 e-106
gb|AL507823.1|AL507823 AL507823 Hordeum vulgare Barke devel... 387 e-106
gb|AL508265.1|AL508265 AL508265 Hordeum vulgare Barke devel... 387 e-106
gb|BF630135.2|BF630135 HVSMEb0008A24f Hordeum vulgare seedl... 387 e-106
gb|BE603279.2|BE603279 HVSMEh0102P06f Hordeum vulgare 5-45 ... 387 e-106
gb|AV913472.1|AV913472 AV913472 K. Sato unpublished cDNA li... 387 e-106
gb|AV915026.1|AV915026 AV915026 K. Sato unpublished cDNA li... 387 e-106
gb|AV915539.1|AV915539 AV915539 K. Sato unpublished cDNA li... 387 e-106
gb|AV920154.1|AV920154 AV920154 K. Sato unpublished cDNA li... 387 e-106
gb|AV922952.1|AV922952 AV922952 K. Sato unpublished cDNA li... 387 e-106
gb|AV925890.1|AV925890 AV925890 K. Sato unpublished cDNA li... 387 e-106
gb|AV926511.1|AV926511 AV926511 K. Sato unpublished cDNA li... 387 e-106
gb|AV928660.1|AV928660 AV928660 K. Sato unpublished cDNA li... 387 e-106
gb|BM816633.1|BM816633 HC111F10_T3.ab1 HC Hordeum vulgare s... 387 e-106
gb|BQ458408.1|BQ458408 HA05F02r HA Hordeum vulgare subsp. v... 387 e-106
gb|BQ467997.1|BQ467997 HR01J17r HR Hordeum vulgare subsp. v... 387 e-106
gb|BM097736.2|BM097736 EBem04_SQ002_I21_R embryo, 12 DPA, n... 387 e-106
gb|BM378034.2|BM378034 EBem04_SQ004_P14_R embryo, 12 DPA, n... 387 e-106
gb|BM100618.2|BM100618 EBma01_SQ005_L24_R maternal, 4 DPA, ... 387 e-106
gb|BM373014.2|BM373014 EBma04_SQ002_L24_R maternal, 10 DPA,... 387 e-106
gb|BM371900.2|BM371900 EBma08_SQ004_G02_R maternal, 28 DPA,... 387 e-106
gb|BM374340.2|BM374340 EBpi03_SQ003_F16_R pistil, 4 DPA, no... 387 e-106
gb|BM097310.2|BM097310 EBro01_SQ004_L19_R root, 3 week, hyd... 387 e-106
gb|BM440934.2|BM440934 EBro08_SQ004_P05_R root, 3 week, dro... 387 e-106
gb|BQ760070.1|BQ760070 EBpi07_SQ003_I06_R pistil, 12 DPA, n... 387 e-106
gb|BQ764689.1|BQ764689 EBca01_SQ004_I17_R carpel, pre-anthe... 387 e-106
gb|BQ765183.1|BQ765183 EBro03_SQ006_M09_R root, 3 week, wat... 387 e-106
gb|BQ765755.1|BQ765755 EBro03_SQ008_G04_R root, 3 week, wat... 387 e-106
gb|BQ767440.1|BQ767440 EBro08_SQ008_L24_R root, 3 week, dro... 387 e-106
gb|BU967504.1|BU967504 HB04H19r BC Hordeum vulgare subsp. v... 387 e-106
gb|BU972882.1|BU972882 HB23A11r BC Hordeum vulgare subsp. v... 387 e-106
gb|BU979395.1|BU979395 HA16A08r HA Hordeum vulgare subsp. v... 387 e-106
gb|BU980947.1|BU980947 HA22C19r HA Hordeum vulgare subsp. v... 387 e-106
gb|BU981698.1|BU981698 HA24F23r HA Hordeum vulgare subsp. v... 387 e-106
gb|BU983769.1|BU983769 HA30P23r HA Hordeum vulgare subsp. v... 387 e-106
gb|BU987123.1|BU987123 HF13N21r HF Hordeum vulgare subsp. v... 387 e-106
gb|BU994118.1|BU994118 HM05M20r HM Hordeum vulgare subsp. v... 387 e-106
gb|BU996429.1|BU996429 HM13J06r HM Hordeum vulgare subsp. v... 387 e-106
gb|CA007312.1|CA007312 HU07I04r HU Hordeum vulgare subsp. v... 387 e-106
gb|CA007385.1|CA007385 HU07M11r HU Hordeum vulgare subsp. v... 387 e-106
gb|CA013256.1|CA013256 HT07N14r HT Hordeum vulgare subsp. v... 387 e-106
gb|CA015363.1|CA015363 HT14B06r HT Hordeum vulgare subsp. v... 387 e-106
gb|CA020519.1|CA020519 HZ36I22r HZ Hordeum vulgare subsp. v... 387 e-106
gb|CA020743.1|CA020743 HZ37H18r HZ Hordeum vulgare subsp. v... 387 e-106
gb|CA023512.1|CA023512 HZ46H15r HZ Hordeum vulgare subsp. v... 387 e-106
gb|BJ547051.1|BJ547051 BJ547051 K. Sato unpublished cDNA li... 387 e-106
gb|BJ547191.1|BJ547191 BJ547191 K. Sato unpublished cDNA li... 387 e-106
gb|BJ547281.1|BJ547281 BJ547281 K. Sato unpublished cDNA li... 387 e-106
gb|BJ547629.1|BJ547629 BJ547629 K. Sato unpublished cDNA li... 387 e-106
gb|BJ547695.1|BJ547695 BJ547695 K. Sato unpublished cDNA li... 387 e-106
gb|BJ549153.1|BJ549153 BJ549153 K. Sato unpublished cDNA li... 387 e-106
gb|BJ549515.1|BJ549515 BJ549515 K. Sato unpublished cDNA li... 387 e-106
gb|CB882543.1|CB882543 HL02C17w HL Hordeum vulgare subsp. v... 387 e-106
gb|CB883400.1|CB883400 HQ02C06w HQ Hordeum vulgare subsp. v... 387 e-106
gb|CK124983.1|CK124983 BES1824111A2f06 BES1824 Hordeum vulg... 387 e-106
gb|CK125919.1|CK125919 BES1824111B1g11 BES1824 Hordeum vulg... 387 e-106
gb|BF623766.2|BF623766 HVSMEa0005K15f Hordeum vulgare seedl... 385 e-105
gb|BM440862.2|BM440862 EBca01_SQ001_H13_R carpel, pre-anthe... 383 e-105
gb|BU989457.1|BU989457 HF21M17r HF Hordeum vulgare subsp. v... 383 e-105
gb|CA017918.1|CA017918 HV06M12r HV Hordeum vulgare subsp. v... 383 e-105
gb|CA027236.1|CA027236 HZ58E16r HZ Hordeum vulgare subsp. v... 383 e-105
gb|CB880779.1|CB880779 HM07M20w HM Hordeum vulgare subsp. v... 383 e-105
gb|BG300273.1|BG300273 HVSMEb0011O02f Hordeum vulgare seedl... 381 e-104
gb|BM097559.2|BM097559 EBem04_SQ002_A16_R embryo, 12 DPA, n... 381 e-104
gb|BJ548957.1|BJ548957 BJ548957 K. Sato unpublished cDNA li... 381 e-104
gb|BF623758.2|BF623758 HVSMEa0005I23f Hordeum vulgare seedl... 379 e-104
gb|BE216074.1|BE216074 HV_CEb0009F07f Hordeum vulgare seedl... 379 e-104
gb|CA020754.1|CA020754 HZ37J03r HZ Hordeum vulgare subsp. v... 377 e-103
gb|BG417241.2|BG417241 HVSMEk0016P06f Hordeum vulgare testa... 373 e-102
gb|AV933481.1|AV933481 AV933481 K. Sato unpublished cDNA li... 373 e-102
gb|AV933482.1|AV933482 AV933482 K. Sato unpublished cDNA li... 373 e-102
gb|AW983377.2|AW983377 HVSMEg0010G20f Hordeum vulgare pre-a... 371 e-101
gb|BQ462545.1|BQ462545 HI01D19T HI Hordeum vulgare subsp. v... 371 e-101
gb|BJ548892.1|BJ548892 BJ548892 K. Sato unpublished cDNA li... 369 e-101
gb|AV936784.1|AV936784 AV936784 K. Sato unpublished cDNA li... 367 e-100
gb|BE559108.2|BE559108 HV_CEb0022O04f Hordeum vulgare seedl... 363 5e-099
gb|BM368211.2|BM368211 EBed01_SQ002_H20_R endosperm, 6 DPA,... 363 5e-099
gb|AV918771.1|AV918771 AV918771 K. Sato unpublished cDNA li... 359 8e-098
gb|AV935668.1|AV935668 AV935668 K. Sato unpublished cDNA li... 359 8e-098
gb|AV935936.1|AV935936 AV935936 K. Sato unpublished cDNA li... 359 8e-098
gb|BJ548520.1|BJ548520 BJ548520 K. Sato unpublished cDNA li... 359 8e-098
gb|CV059370.1|CV059370 BNEL47d2 Barley EST endosperm librar... 359 8e-098
gb|AV927668.1|AV927668 AV927668 K. Sato unpublished cDNA li... 357 3e-097
gb|AV931398.1|AV931398 AV931398 K. Sato unpublished cDNA li... 357 3e-097
gb|AJ460714.1|AJ460714 AJ460714 S00002 Hordeum vulgare subs... 357 3e-097
gb|BQ760981.1|BQ760981 EBro03_SQ004_A10_R root, 3 week, wat... 357 3e-097
gb|BJ548123.1|BJ548123 BJ548123 K. Sato unpublished cDNA li... 357 3e-097
gb|CK125633.1|CK125633 BES1824109e17 BES1824 Hordeum vulgar... 357 3e-097
gb|CA024759.1|CA024759 HZ50D15r HZ Hordeum vulgare subsp. v... 351 2e-095
gb|BM371687.2|BM371687 EBma08_SQ003_J16_R maternal, 28 DPA,... 333 4e-090
gb|CA021839.1|CA021839 HZ41E12r HZ Hordeum vulgare subsp. v... 333 4e-090
gb|BM099994.2|BM099994 EBes01_SQ004_N18_R embryo sac, 4-6 D... 325 1e-087
gb|BI955919.1|BI955919 HVSMEm0025B06f Hordeum vulgare green... 323 4e-087
gb|BJ548756.1|BJ548756 BJ548756 K. Sato unpublished cDNA li... 321 2e-086
gb|BQ467882.1|BQ467882 HR01D14r HR Hordeum vulgare subsp. v... 317 3e-085
gb|AJ463321.1|AJ463321 AJ463321 S00002 Hordeum vulgare subs... 309 6e-083
gb|AJ432555.1|AJ432555 AJ432555 S00002 Hordeum vulgare subs... 305 1e-081
gb|BJ547431.1|BJ547431 BJ547431 K. Sato unpublished cDNA li... 299 6e-080
gb|AL509219.1|AL509219 AL509219 Hordeum vulgare Barke devel... 295 1e-078
gb|BI952661.1|BI952661 HVSMEm0007E22f Hordeum vulgare green... 289 6e-077
gb|AJ460713.1|AJ460713 AJ460713 S00002 Hordeum vulgare subs... 287 2e-076
gb|BF254440.3|BF254440 HVSMEf0004A11f Hordeum vulgare seedl... 276 9e-073
gb|BM099107.2|BM099107 EBpi05_SQ002_P11_R pistil, 8 DPA, no... 276 9e-073
gb|BQ759139.1|BQ759139 EBma07_SQ003_M21_R maternal, 21 DPA,... 254 3e-066
gb|AL511086.1|AL511086 AL511086 Hordeum vulgare Barke devel... 244 3e-063
gb|CA029100.1|CA029100 HZ64D06r HZ Hordeum vulgare subsp. v... 242 1e-062
gb|CD663958.1|CD663958 UCRHV18_07ba02_b1 Drought-stressed D... 238 2e-061
gb|BJ547827.1|BJ547827 BJ547827 K. Sato unpublished cDNA li... 236 8e-061
gb|AL507452.1|AL507452 AL507452 Hordeum vulgare Barke devel... 230 5e-059
gb|AL510698.1|AL510698 AL510698 Hordeum vulgare Barke devel... 230 5e-059
gb|BF259922.3|BF259922 HVSMEf0020K02f Hordeum vulgare seedl... 230 5e-059
gb|AV913404.1|AV913404 AV913404 K. Sato unpublished cDNA li... 230 5e-059
gb|AV918702.1|AV918702 AV918702 K. Sato unpublished cDNA li... 230 5e-059
gb|AV922272.1|AV922272 AV922272 K. Sato unpublished cDNA li... 230 5e-059
gb|BQ463496.1|BQ463496 HI05H15r HI Hordeum vulgare subsp. v... 230 5e-059
gb|BQ468105.1|BQ468105 HR01P09r HR Hordeum vulgare subsp. v... 230 5e-059
gb|BQ468455.1|BQ468455 HM01E23T HM Hordeum vulgare subsp. v... 230 5e-059
gb|BQ660968.1|BQ660968 HM01E23w HM Hordeum vulgare subsp. v... 230 5e-059
gb|BM443805.2|BM443805 EBem09_SQ001_J03_R embryo, 1 Day ger... 230 5e-059
gb|BI780994.2|BI780994 EBma03_SQ001_B15_R maternal, 8 DPA, ... 230 5e-059
gb|BQ758875.1|BQ758875 EBma07_SQ003_H01_R maternal, 21 DPA,... 230 5e-059
gb|BU974131.1|BU974131 HB26P19r BC Hordeum vulgare subsp. v... 230 5e-059
gb|BU986032.1|BU986032 HF09G16r HF Hordeum vulgare subsp. v... 230 5e-059
gb|BU988220.1|BU988220 HF17A08r HF Hordeum vulgare subsp. v... 230 5e-059
gb|BU994543.1|BU994543 HM07G13r HM Hordeum vulgare subsp. v... 230 5e-059
gb|CA020096.1|CA020096 HV14F07r HV Hordeum vulgare subsp. v... 230 5e-059
gb|CA022010.1|CA022010 HZ41O07r HZ Hordeum vulgare subsp. v... 230 5e-059
gb|CA024926.1|CA024926 HZ50L13r HZ Hordeum vulgare subsp. v... 230 5e-059
gb|BG417344.2|BG417344 HVSMEk0017J15f Hordeum vulgare testa... 228 2e-058
gb|CV054049.1|CV054049 BNEL106b7 Barley EST endosperm libra... 224 3e-057
gb|BF257081.2|BF257081 HVSMEf0011M21f Hordeum vulgare seedl... 222 1e-056
gb|BJ545043.1|BJ545043 BJ545043 K. Sato unpublished cDNA li... 222 1e-056
gb|CB880072.1|CB880072 HM05G13w HM Hordeum vulgare subsp. v... 222 1e-056
gb|BM444258.1|BM444258 EBem09_SQ004_K01_R embryo, 1 Day ger... 218 2e-055
gb|CB881287.1|CB881287 HM09F15w HM Hordeum vulgare subsp. v... 212 1e-053
gb|AL501899.1|AL501899 AL501899 Hordeum vulgare Barke roots... 208 2e-052
gb|BQ759353.1|BQ759353 EBpi01_SQ004_C12_R pistil, 1 DPA, no... 208 2e-052
gb|CA026719.1|CA026719 HZ56L21r HZ Hordeum vulgare subsp. v... 208 2e-052
gb|BJ544400.1|BJ544400 BJ544400 K. Sato unpublished cDNA li... 208 2e-052
gb|BJ546495.1|BJ546495 BJ546495 K. Sato unpublished cDNA li... 208 2e-052
gb|BJ548390.1|BJ548390 BJ548390 K. Sato unpublished cDNA li... 208 2e-052
gb|BG417705.1|BG417705 HVSMEk0019D04f Hordeum vulgare testa... 206 7e-052
gb|BJ545013.1|BJ545013 BJ545013 K. Sato unpublished cDNA li... 202 1e-050
gb|BF258521.3|BF258521 HVSMEf0015P03f Hordeum vulgare seedl... 200 4e-050
gb|BQ662018.1|BQ662018 HR01D14u HR Hordeum vulgare subsp. v... 200 4e-050
gb|BJ548705.1|BJ548705 BJ548705 K. Sato unpublished cDNA li... 196 7e-049
gb|AJ435184.1|AJ435184 AJ435184 S00002 Hordeum vulgare subs... 194 3e-048
gb|CA024745.1|CA024745 HZ50C23r HZ Hordeum vulgare subsp. v... 194 3e-048
gb|BQ756051.1|BQ756051 EBem05_SQ001_H09_R embryo, 14 DPA, n... 188 2e-046
gb|BQ759037.1|BQ759037 EBma07_SQ003_G18_R maternal, 21 DPA,... 188 2e-046
gb|BQ658206.1|BQ658206 HA05F02u HA Hordeum vulgare subsp. v... 178 2e-043
gb|BQ662109.1|BQ662109 HR01J17u HR Hordeum vulgare subsp. v... 178 2e-043
gb|AL511497.1|AL511497 AL511497 Hordeum vulgare Barke devel... 174 2e-042
gb|BQ662191.1|BQ662191 HR01P09u HR Hordeum vulgare subsp. v... 172 1e-041
gb|AL499631.1|AL499631 AL499631 Hordeum vulgare Barke etiol... 168 2e-040
gb|BJ548496.1|BJ548496 BJ548496 K. Sato unpublished cDNA li... 155 2e-036
gb|BF254507.2|BF254507 HVSMEf0004D12f Hordeum vulgare seedl... 151 4e-035
gb|BJ549152.1|BJ549152 BJ549152 K. Sato unpublished cDNA li... 145 2e-033
gb|CD662616.1|CD662616 UCRHV18_02cb12_b1 Drought-stressed D... 141 3e-032
gb|BF629804.2|BF629804 HVSMEb0013O09f Hordeum vulgare seedl... 135 2e-030
gb|BJ547255.1|BJ547255 BJ547255 K. Sato unpublished cDNA li... 129 1e-028
gb|BQ761695.1|BQ761695 EBem10_SQ001_G14_R embryo, 2 Day ger... 125 2e-027
gb|BM097275.1|BM097275 EBpi07_SQ002_P08_R pistil, 12 DPA, n... 115 2e-024
gb|BM373684.2|BM373684 EBma03_SQ002_F09_R maternal, 8 DPA, ... 115 2e-024
gb|BG416756.2|BG416756 HVSMEk0014G02f Hordeum vulgare testa... 105 2e-021
gb|CA017253.1|CA017253 HV14F07u HV Hordeum vulgare subsp. v... 105 2e-021
gb|CA032026.1|CA032026 HX11M18r HX Hordeum vulgare subsp. v... 105 2e-021
gb|CB876603.1|CB876603 HX11M18w HX Hordeum vulgare subsp. v... 105 2e-021
gb|BU996256.1|BU996256 HM13A14r HM Hordeum vulgare subsp. v... 103 7e-021
gb|CA024880.1|CA024880 HZ50J06r HZ Hordeum vulgare subsp. v... 100 1e-019
gb|BQ765870.1|BQ765870 EBro03_SQ008_L08_R root, 3 week, wat... 88 4e-016
gb|BU995147.1|BU995147 HM09F15r HM Hordeum vulgare subsp. v... 88 4e-016
gb|BM099737.2|BM099737 EBes01_SQ004_C05_R embryo sac, 4-6 D... 64 6e-009
gb|BI777170.2|BI777170 EBro03_SQ002_D24_R root, 3 week, wat... 64 6e-009
gb|BM370839.2|BM370839 EBro04_SQ002_H15_R root, 3 week, sal... 64 6e-009
gb|BU973644.1|BU973644 HB25J03r BC Hordeum vulgare subsp. v... 64 6e-009
gb|BU976786.1|BU976786 HA10F01r HA Hordeum vulgare subsp. v... 64 6e-009
gb|BU976787.1|BU976787 HA10F01u HA Hordeum vulgare subsp. v... 64 6e-009
gb|BU977130.1|BU977130 HA10O06r HA Hordeum vulgare subsp. v... 64 6e-009
gb|BU977131.1|BU977131 HA10O06u HA Hordeum vulgare subsp. v... 64 6e-009
gb|BU984610.1|BU984610 HF04H01r HF Hordeum vulgare subsp. v... 64 6e-009
gb|CA012196.1|CA012196 HT04L05r HT Hordeum vulgare subsp. v... 64 6e-009
gb|CA017847.1|CA017847 HV06H15r HV Hordeum vulgare subsp. v... 64 6e-009
gb|CA028391.1|CA028391 HZ61N10r HZ Hordeum vulgare subsp. v... 64 6e-009
gb|BM441216.2|BM441216 EBed02_SQ002_M02_R endosperm, 8 DPA,... 62 3e-008
gb|CV055448.1|CV055448 BNEL11F8 Barley EST endosperm librar... 60 1e-007
gb|CV055677.1|CV055677 BNEL122c3 Barley EST endosperm libra... 60 1e-007
gb|BF625784.2|BF625784 HVSMEa0013J13f Hordeum vulgare seedl... 58 4e-007
gb|BQ764912.1|BQ764912 EBca01_SQ005_B09_R carpel, pre-anthe... 58 4e-007
gb|AU090082.1|AU090082 AU090082 Hordeum vulgare subsp. vulg... 56 2e-006
gb|BE231070.1|BE231070 HVSMEg0016F05f Hordeum vulgare pre-a... 56 2e-006
gb|BE060577.3|BE060577 HVSMEg0012K21f Hordeum vulgare pre-a... 56 2e-006
gb|BG415041.2|BG415041 HVSMEk0004M21f Hordeum vulgare testa... 56 2e-006
gb|BE216802.3|BE216802 HV_CEb0011K02f Hordeum vulgare seedl... 56 2e-006
gb|AV917313.1|AV917313 AV917313 K. Sato unpublished cDNA li... 56 2e-006
gb|AV922490.1|AV922490 AV922490 K. Sato unpublished cDNA li... 56 2e-006
gb|BJ453666.1|BJ453666 BJ453666 K. Sato unpublished cDNA li... 56 2e-006
gb|BJ461207.1|BJ461207 BJ461207 K. Sato unpublished cDNA li... 56 2e-006
gb|BU997097.1|BU997097 HI06O12r HI Hordeum vulgare subsp. v... 56 2e-006
gb|CV056095.1|CV056095 BNEL13H2 Barley EST endosperm librar... 56 2e-006
gb|CV056184.1|CV056184 BNEL14H2 Barley EST endosperm librar... 56 2e-006
gb|CV057515.1|CV057515 BNEL28g11 Barley EST endosperm libra... 56 2e-006
gb|CV058779.1|CV058779 BNEL40g6 Barley EST endosperm librar... 56 2e-006
gb|CV060161.1|CV060161 BNEL55b10 Barley EST endosperm libra... 56 2e-006
gb|CV063562.1|CV063562 BNEL90f9 Barley EST endosperm librar... 56 2e-006
gb|BF267345.2|BF267345 HV_CEa0017K09f Hordeum vulgare seedl... 50 1e-004
gb|AW983327.2|AW983327 HVSMEg0010D16f Hordeum vulgare pre-a... 48 4e-004
gb|BU987937.1|BU987937 HF16D04r HF Hordeum vulgare subsp. v... 48 4e-004
gb|CV058800.1|CV058800 BNEL41a6 Barley EST endosperm librar... 48 4e-004
gb|CA018006.1|CA018006 HV07C02r HV Hordeum vulgare subsp. v... 44 0.006
gb|CV061698.1|CV061698 BNEL70h3 Barley EST endosperm librar... 44 0.006
gb|BF257383.3|BF257383 HVSMEf0012L21f Hordeum vulgare seedl... 42 0.024
gb|BG344164.2|BG344164 HVSMEg0007O08f Hordeum vulgare pre-a... 42 0.024
gb|BI953240.1|BI953240 HVSMEm0011N02f Hordeum vulgare green... 40 0.093
gb|BI953789.1|BI953789 HVSMEm0014H22f Hordeum vulgare green... 40 0.093
gb|BI955125.1|BI955125 HVSMEm0021I03f Hordeum vulgare green... 40 0.093
gb|BI955473.1|BI955473 HVSMEm0023E14f Hordeum vulgare green... 40 0.093
gb|BE215383.1|BE215383 HV_CEb0006K10f Hordeum vulgare seedl... 40 0.093
gb|AL505584.1|AL505584 AL505584 Hordeum vulgare Barke roots... 36 1.4
gb|BF628238.1|BF628238 HVSMEb0003I01f Hordeum vulgare seedl... 36 1.4
gb|BF256352.2|BF256352 HVSMEf0009F10f Hordeum vulgare seedl... 36 1.4
gb|BF257596.2|BF257596 HVSMEf0013E23f Hordeum vulgare seedl... 36 1.4
gb|BG368670.1|BG368670 HVSMEi0020C19f Hordeum vulgare 20 DA... 36 1.4
gb|BI952641.1|BI952641 HVSMEm0007E13f Hordeum vulgare green... 36 1.4
gb|BG365477.2|BG365477 HVSMEi0002N15f Hordeum vulgare 20 DA... 36 1.4
gb|BG369379.2|BG369379 HVSMEi0024C18f Hordeum vulgare 20 DA... 36 1.4
gb|BQ467950.1|BQ467950 HR01H03r HR Hordeum vulgare subsp. v... 36 1.4
gb|BQ471515.1|BQ471515 HV02K17r HV Hordeum vulgare subsp. v... 36 1.4
gb|BQ471902.1|BQ471902 HV03N04r HV Hordeum vulgare subsp. v... 36 1.4
gb|BM371947.2|BM371947 EBma08_SQ004_H18_R maternal, 28 DPA,... 36 1.4
gb|CA018087.1|CA018087 HV07G18r HV Hordeum vulgare subsp. v... 36 1.4
gb|CB877554.1|CB877554 HP05F18T HP Hordeum vulgare subsp. v... 36 1.4
gb|BE422211.1|BE422211 HWM021cF.02r ITEC HWM Barley Leaf Li... 34 5.7
gb|AL499719.1|AL499719 AL499719 Hordeum vulgare Barke etiol... 34 5.7
gb|AL501853.1|AL501853 AL501853 Hordeum vulgare Barke roots... 34 5.7
gb|AL504547.1|AL504547 AL504547 Hordeum vulgare Barke roots... 34 5.7
gb|AL506867.1|AL506867 AL506867 Hordeum vulgare Barke devel... 34 5.7
gb|AL507531.1|AL507531 AL507531 Hordeum vulgare Barke devel... 34 5.7
gb|AL510642.1|AL510642 AL510642 Hordeum vulgare Barke devel... 34 5.7
gb|BF621680.2|BF621680 HVSMEa0011N13f Hordeum vulgare seedl... 34 5.7
gb|BF621172.3|BF621172 HVSMEa0004N02f Hordeum vulgare seedl... 34 5.7
gb|BG309920.1|BG309920 HVSMEc0015B02f Hordeum vulgare seedl... 34 5.7
gb|AW982158.2|AW982158 HVSMEg0002A22f Hordeum vulgare pre-a... 34 5.7
gb|BI952343.1|BI952343 HVSMEm0006A04f Hordeum vulgare green... 34 5.7
gb|BI960474.1|BI960474 HVSMEn0024L14f Hordeum vulgare rachi... 34 5.7
gb|BI960660.1|BI960660 HVSMEn0025K12f Hordeum vulgare rachi... 34 5.7
gb|BE456027.3|BE456027 HVSMEg0019F18f Hordeum vulgare pre-a... 34 5.7
gb|AV920514.1|AV920514 AV920514 K. Sato unpublished cDNA li... 34 5.7
gb|AV930370.1|AV930370 AV930370 K. Sato unpublished cDNA li... 34 5.7
gb|BQ464710.1|BQ464710 HU01A17T HU Hordeum vulgare subsp. v... 34 5.7
gb|BQ464955.1|BQ464955 HU02D22r HU Hordeum vulgare subsp. v... 34 5.7
gb|BQ469985.1|BQ469985 HX01G24T HX Hordeum vulgare subsp. v... 34 5.7
gb|BQ470145.1|BQ470145 HX01O12T HX Hordeum vulgare subsp. v... 34 5.7
gb|BQ471089.1|BQ471089 HX04O23r HX Hordeum vulgare subsp. v... 34 5.7
gb|BQ663170.1|BQ663170 HU01A17w HU Hordeum vulgare subsp. v... 34 5.7
gb|BQ665739.1|BQ665739 HX04O23u HX Hordeum vulgare subsp. v... 34 5.7
gb|BM442423.2|BM442423 EBan01_SQ003_C08_R anther, yellow st... 34 5.7
gb|BM373311.2|BM373311 EBma04_SQ003_P15_R maternal, 10 DPA,... 34 5.7
gb|BM441468.2|BM441468 EBma05_SQ004_H05_R maternal, 12 DPA,... 34 5.7
gb|BM097190.2|BM097190 EBpi07_SQ002_L03_R pistil, 12 DPA, n... 34 5.7
gb|BM372257.2|BM372257 EBro03_SQ004_H07_R root, 3 week, wat... 34 5.7
gb|BQ758982.1|BQ758982 EBma07_SQ003_M10_R maternal, 21 DPA,... 34 5.7
gb|BQ760284.1|BQ760284 EBpi07_SQ003_E20_R pistil, 12 DPA, n... 34 5.7
gb|BU967650.1|BU967650 HB04P14r BC Hordeum vulgare subsp. v... 34 5.7
gb|BU984620.1|BU984620 HF04H11r HF Hordeum vulgare subsp. v... 34 5.7
gb|BU989629.1|BU989629 HF22E07r HF Hordeum vulgare subsp. v... 34 5.7
gb|BU994826.1|BU994826 HM08F09r HM Hordeum vulgare subsp. v... 34 5.7
gb|CA024456.1|CA024456 HZ49F20r HZ Hordeum vulgare subsp. v... 34 5.7
gb|CA025287.1|CA025287 HZ51L07r HZ Hordeum vulgare subsp. v... 34 5.7
gb|BJ548104.1|BJ548104 BJ548104 K. Sato unpublished cDNA li... 34 5.7
gb|BJ548105.1|BJ548105 BJ548105 K. Sato unpublished cDNA li... 34 5.7
gb|BJ548426.1|BJ548426 BJ548426 K. Sato unpublished cDNA li... 34 5.7
gb|BJ548834.1|BJ548834 BJ548834 K. Sato unpublished cDNA li... 34 5.7
gb|BJ548931.1|BJ548931 BJ548931 K. Sato unpublished cDNA li... 34 5.7
gb|BJ549691.1|BJ549691 BJ549691 K. Sato unpublished cDNA li... 34 5.7
gb|BJ550151.1|BJ550151 BJ550151 K. Sato unpublished cDNA li... 34 5.7
>gb|BG300952.1|BG300952 HVSMEb0019B01f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0019B01f, mRNA sequence
Length = 584
Score = 394 bits (199), Expect = e-108
Identities = 349/399 (87%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 489 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 430
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 429 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 370
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 369 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 310
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 309 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 250
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
|||||||||| ||||||||||| ||||||||||| || || |||||||||||||| || |
Sbjct: 249 catcggtagcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcat 190
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 189 caaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttgg 130
Query: 534 tgttgtgcttggccacctcctcgagggtgtacaccttgg 572
| ||||||||| ||||||||||||||| | |||||||
Sbjct: 129 aggcgtgcttggcgacctcctcgagggtgaagaccttgg 91
>gb|BQ768075.1|BQ768075 EBro08_SQ010_J17_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ010_J17 5', mRNA sequence
Length = 537
Score = 394 bits (199), Expect = e-108
Identities = 349/399 (87%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 500 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 441
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 440 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 381
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
||||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 380 gcggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 321
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 320 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 261
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
||||||| || ||||||||||| ||||||||||| || || |||||||||||||| || |
Sbjct: 260 catcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcat 201
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 200 caaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttgg 141
Query: 534 tgttgtgcttggccacctcctcgagggtgtacaccttgg 572
| ||||||||| ||||||||||||||| | |||||||
Sbjct: 140 aggcgtgcttggcgacctcctcgagggtgaagaccttgg 102
>gb|BQ462791.1|BQ462791 HI02A08r HI Hordeum vulgare subsp. vulgare cDNA clone HI02A08
5-PRIME, mRNA sequence
Length = 632
Score = 389 bits (196), Expect = e-107
Identities = 349/400 (87%)
Strand = Plus / Minus
Query: 173 gactaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcg 232
|||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| ||
Sbjct: 502 gactagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcc 443
Query: 233 agggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtag 292
||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||
Sbjct: 442 agggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtag 383
Query: 293 tgcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctca 352
|| ||||||||||| ||| ||||||| ||||||||||||||||||| || || |||||
Sbjct: 382 tgtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcg 323
Query: 353 cccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaa 412
|| || |||||||||||||||| || || || || ||||||| |||||||| || ||
Sbjct: 322 ccgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaag 263
Query: 413 tcatcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcc 472
|||||||| || ||||||||||| ||||||||||| || || |||||||||||||| ||
Sbjct: 262 tcatcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtca 203
Query: 473 tccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttg 532
|| || ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||
Sbjct: 202 tcaaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttg 143
Query: 533 gtgttgtgcttggccacctcctcgagggtgtacaccttgg 572
| | ||||||||| ||||||||||||||| | |||||||
Sbjct: 142 gaggcgtgcttggcgacctcctcgagggtgaagaccttgg 103
>gb|BE420969.1|BE420969 HWM004.D10 ITEC HWM Barley Leaf Library Hordeum vulgare subsp.
vulgare cDNA clone HWM004.D10, mRNA sequence
Length = 1161
Score = 387 bits (195), Expect = e-106
Identities = 348/399 (87%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 657 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 598
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 597 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 538
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 537 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 478
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 477 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 418
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
||||||| || ||||||||||| ||||||||||| || || |||||||||||||| || |
Sbjct: 417 catcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcat 358
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 357 caaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttgg 298
Query: 534 tgttgtgcttggccacctcctcgagggtgtacaccttgg 572
| ||||||||| ||||||||||||||| | |||||||
Sbjct: 297 aggcgtgcttggcgacctcctcgagggtgaagaccttgg 259
>gb|BE421668.1|BE421668 HWM012cF.03r ITEC HWM Barley Leaf Library Hordeum vulgare subsp.
vulgare cDNA clone HWM012cF.03, mRNA sequence
Length = 1351
Score = 387 bits (195), Expect = e-106
Identities = 348/399 (87%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 626 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 567
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 566 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 507
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 506 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 447
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 446 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 387
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
||||||| || ||||||||||| ||||||||||| || || |||||||||||||| || |
Sbjct: 386 catcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcat 327
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 326 caaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttgg 267
Query: 534 tgttgtgcttggccacctcctcgagggtgtacaccttgg 572
| ||||||||| ||||||||||||||| | |||||||
Sbjct: 266 aggcgtgcttggcgacctcctcgagggtgaagaccttgg 228
>gb|AL504596.1|AL504596 AL504596 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW05M08V 5', mRNA sequence
Length = 700
Score = 387 bits (195), Expect = e-106
Identities = 348/399 (87%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 457 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 398
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 397 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 338
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 337 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 278
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 277 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 218
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
||||||| || ||||||||||| ||||||||||| || || |||||||||||||| || |
Sbjct: 217 catcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcat 158
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 157 caaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttgg 98
Query: 534 tgttgtgcttggccacctcctcgagggtgtacaccttgg 572
| ||||||||| ||||||||||||||| | |||||||
Sbjct: 97 aggcgtgcttggcgacctcctcgagggtgaagaccttgg 59
>gb|AL507823.1|AL507823 AL507823 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY06P06V 5',
mRNA sequence
Length = 700
Score = 387 bits (195), Expect = e-106
Identities = 348/399 (87%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 487 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 428
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 427 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 368
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 367 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 308
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 307 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 248
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
||||||| || ||||||||||| ||||||||||| || || |||||||||||||| || |
Sbjct: 247 catcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcat 188
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 187 caaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttgg 128
Query: 534 tgttgtgcttggccacctcctcgagggtgtacaccttgg 572
| ||||||||| ||||||||||||||| | |||||||
Sbjct: 127 aggcgtgcttggcgacctcctcgagggtgaagaccttgg 89
>gb|AL508265.1|AL508265 AL508265 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY08E05V 5',
mRNA sequence
Length = 606
Score = 387 bits (195), Expect = e-106
Identities = 348/399 (87%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 504 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 445
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 444 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 385
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 384 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 325
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 324 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 265
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
||||||| || ||||||||||| ||||||||||| || || |||||||||||||| || |
Sbjct: 264 catcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcat 205
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 204 caaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttgg 145
Query: 534 tgttgtgcttggccacctcctcgagggtgtacaccttgg 572
| ||||||||| ||||||||||||||| | |||||||
Sbjct: 144 aggcgtgcttggcgacctcctcgagggtgaagaccttgg 106
>gb|BF630135.2|BF630135 HVSMEb0008A24f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0008A24f, mRNA sequence
Length = 496
Score = 387 bits (195), Expect = e-106
Identities = 348/399 (87%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 492 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 433
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 432 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 373
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 372 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 313
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 312 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 253
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
||||||| || ||||||||||| ||||||||||| || || |||||||||||||| || |
Sbjct: 252 catcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcat 193
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 192 caaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttgg 133
Query: 534 tgttgtgcttggccacctcctcgagggtgtacaccttgg 572
| ||||||||| ||||||||||||||| | |||||||
Sbjct: 132 aggcgtgcttggcgacctcctcgagggtgaagaccttgg 94
>gb|BE603279.2|BE603279 HVSMEh0102P06f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0102P06f, mRNA sequence
Length = 530
Score = 387 bits (195), Expect = e-106
Identities = 348/399 (87%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 502 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 443
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 442 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 383
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 382 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 323
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 322 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 263
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
||||||| || ||||||||||| ||||||||||| || || |||||||||||||| || |
Sbjct: 262 catcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcat 203
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 202 caaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttgg 143
Query: 534 tgttgtgcttggccacctcctcgagggtgtacaccttgg 572
| ||||||||| ||||||||||||||| | |||||||
Sbjct: 142 aggcgtgcttggcgacctcctcgagggtgaagaccttgg 104
>gb|AV913472.1|AV913472 AV913472 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags22d07 5', mRNA sequence
Length = 627
Score = 387 bits (195), Expect = e-106
Identities = 348/399 (87%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 500 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 441
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 440 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 381
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 380 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 321
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 320 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 261
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
||||||| || ||||||||||| ||||||||||| || || |||||||||||||| || |
Sbjct: 260 catcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcat 201
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 200 caaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttgg 141
Query: 534 tgttgtgcttggccacctcctcgagggtgtacaccttgg 572
| ||||||||| ||||||||||||||| | |||||||
Sbjct: 140 aggcgtgcttggcgacctcctcgagggtgaagaccttgg 102
>gb|AV915026.1|AV915026 AV915026 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags9h24 5', mRNA sequence
Length = 526
Score = 387 bits (195), Expect = e-106
Identities = 348/399 (87%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 493 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 434
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 433 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 374
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 373 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 314
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 313 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 254
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
||||||| || ||||||||||| ||||||||||| || || |||||||||||||| || |
Sbjct: 253 catcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcat 194
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 193 caaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttgg 134
Query: 534 tgttgtgcttggccacctcctcgagggtgtacaccttgg 572
| ||||||||| ||||||||||||||| | |||||||
Sbjct: 133 aggcgtgcttggcgacctcctcgagggtgaagaccttgg 95
>gb|AV915539.1|AV915539 AV915539 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags14p21 5', mRNA sequence
Length = 584
Score = 387 bits (195), Expect = e-106
Identities = 348/399 (87%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 455 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 396
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 395 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 336
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 335 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 276
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 275 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 216
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
||||||| || ||||||||||| ||||||||||| || || |||||||||||||| || |
Sbjct: 215 catcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcat 156
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 155 caaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttgg 96
Query: 534 tgttgtgcttggccacctcctcgagggtgtacaccttgg 572
| ||||||||| ||||||||||||||| | |||||||
Sbjct: 95 aggcgtgcttggcgacctcctcgagggtgaagaccttgg 57
>gb|AV920154.1|AV920154 AV920154 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags9h24 3', mRNA sequence
Length = 721
Score = 387 bits (195), Expect = e-106
Identities = 348/399 (87%)
Strand = Plus / Plus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 313 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 372
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 373 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 432
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 433 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 492
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 493 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 552
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
||||||| || ||||||||||| ||||||||||| || || |||||||||||||| || |
Sbjct: 553 catcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcat 612
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 613 caaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttgg 672
Query: 534 tgttgtgcttggccacctcctcgagggtgtacaccttgg 572
| ||||||||| ||||||||||||||| | |||||||
Sbjct: 673 aggcgtgcttggcgacctcctcgagggtgaagaccttgg 711
>gb|AV922952.1|AV922952 AV922952 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd3b18 5', mRNA sequence
Length = 553
Score = 387 bits (195), Expect = e-106
Identities = 348/399 (87%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 511 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 452
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 451 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 392
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 391 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 332
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 331 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 272
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
||||||| || ||||||||||| ||||||||||| || || |||||||||||||| || |
Sbjct: 271 catcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcat 212
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 211 caaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttgg 152
Query: 534 tgttgtgcttggccacctcctcgagggtgtacaccttgg 572
| ||||||||| ||||||||||||||| | |||||||
Sbjct: 151 aggcgtgcttggcgacctcctcgagggtgaagaccttgg 113
>gb|AV925890.1|AV925890 AV925890 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basdd16 5', mRNA sequence
Length = 563
Score = 387 bits (195), Expect = e-106
Identities = 348/399 (87%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 520 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 461
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 460 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 401
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 400 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 341
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 340 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 281
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
||||||| || ||||||||||| ||||||||||| || || |||||||||||||| || |
Sbjct: 280 catcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcat 221
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 220 caaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttgg 161
Query: 534 tgttgtgcttggccacctcctcgagggtgtacaccttgg 572
| ||||||||| ||||||||||||||| | |||||||
Sbjct: 160 aggcgtgcttggcgacctcctcgagggtgaagaccttgg 122
>gb|AV926511.1|AV926511 AV926511 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd19k09 5', mRNA sequence
Length = 624
Score = 387 bits (195), Expect = e-106
Identities = 348/399 (87%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 498 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 439
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 438 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 379
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 378 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 319
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 318 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 259
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
||||||| || ||||||||||| ||||||||||| || || |||||||||||||| || |
Sbjct: 258 catcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcat 199
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 198 caaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttgg 139
Query: 534 tgttgtgcttggccacctcctcgagggtgtacaccttgg 572
| ||||||||| ||||||||||||||| | |||||||
Sbjct: 138 aggcgtgcttggcgacctcctcgagggtgaagaccttgg 100
>gb|AV928660.1|AV928660 AV928660 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd15d16 3', mRNA sequence
Length = 632
Score = 387 bits (195), Expect = e-106
Identities = 348/399 (87%)
Strand = Plus / Plus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 223 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 282
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 283 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 342
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 343 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 402
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 403 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 462
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
||||||| || ||||||||||| ||||||||||| || || |||||||||||||| || |
Sbjct: 463 catcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcat 522
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 523 caaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttgg 582
Query: 534 tgttgtgcttggccacctcctcgagggtgtacaccttgg 572
| ||||||||| ||||||||||||||| | |||||||
Sbjct: 583 aggcgtgcttggcgacctcctcgagggtgaagaccttgg 621
>gb|BM816633.1|BM816633 HC111F10_T3.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC111F10_T3.ab1 similar to Arginine
decarboxylase,Arginine 2-monooxygenase,Glycine
dehydrogenase (decarboxylating),, mRNA sequence
Length = 870
Score = 387 bits (195), Expect = e-106
Identities = 348/399 (87%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 528 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 469
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 468 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 409
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 408 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 349
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 348 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 289
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
||||||| || ||||||||||| ||||||||||| || || |||||||||||||| || |
Sbjct: 288 catcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcat 229
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 228 caaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttgg 169
Query: 534 tgttgtgcttggccacctcctcgagggtgtacaccttgg 572
| ||||||||| ||||||||||||||| | |||||||
Sbjct: 168 aggcgtgcttggcgacctcctcgagggtgaagaccttgg 130
>gb|BQ458408.1|BQ458408 HA05F02r HA Hordeum vulgare subsp. vulgare cDNA clone HA05F02
5-PRIME, mRNA sequence
Length = 513
Score = 387 bits (195), Expect = e-106
Identities = 348/399 (87%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 500 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 441
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 440 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 381
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 380 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 321
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 320 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 261
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
||||||| || ||||||||||| ||||||||||| || || |||||||||||||| || |
Sbjct: 260 catcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcat 201
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 200 caaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttgg 141
Query: 534 tgttgtgcttggccacctcctcgagggtgtacaccttgg 572
| ||||||||| ||||||||||||||| | |||||||
Sbjct: 140 aggcgtgcttggcgacctcctcgagggtgaagaccttgg 102
>gb|BQ467997.1|BQ467997 HR01J17r HR Hordeum vulgare subsp. vulgare cDNA clone HR01J17
5-PRIME, mRNA sequence
Length = 525
Score = 387 bits (195), Expect = e-106
Identities = 348/399 (87%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 509 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 450
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 449 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 390
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 389 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 330
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 329 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 270
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
||||||| || ||||||||||| ||||||||||| || || |||||||||||||| || |
Sbjct: 269 catcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcat 210
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 209 caaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttgg 150
Query: 534 tgttgtgcttggccacctcctcgagggtgtacaccttgg 572
| ||||||||| ||||||||||||||| | |||||||
Sbjct: 149 aggcgtgcttggcgacctcctcgagggtgaagaccttgg 111
>gb|BM097736.2|BM097736 EBem04_SQ002_I21_R embryo, 12 DPA, no treatment, cv Optic, EBem04
Hordeum vulgare subsp. vulgare cDNA clone
EBem04_SQ002_I21 5', mRNA sequence
Length = 512
Score = 387 bits (195), Expect = e-106
Identities = 348/399 (87%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 487 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 428
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 427 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 368
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 367 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 308
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 307 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 248
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
||||||| || ||||||||||| ||||||||||| || || |||||||||||||| || |
Sbjct: 247 catcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcat 188
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 187 caaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttgg 128
Query: 534 tgttgtgcttggccacctcctcgagggtgtacaccttgg 572
| ||||||||| ||||||||||||||| | |||||||
Sbjct: 127 aggcgtgcttggcgacctcctcgagggtgaagaccttgg 89
>gb|BM378034.2|BM378034 EBem04_SQ004_P14_R embryo, 12 DPA, no treatment, cv Optic, EBem04
Hordeum vulgare subsp. vulgare cDNA clone
EBem04_SQ004_P14 5', mRNA sequence
Length = 494
Score = 387 bits (195), Expect = e-106
Identities = 348/399 (87%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 457 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 398
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 397 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 338
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 337 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 278
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 277 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 218
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
||||||| || ||||||||||| ||||||||||| || || |||||||||||||| || |
Sbjct: 217 catcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcat 158
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 157 caaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttgg 98
Query: 534 tgttgtgcttggccacctcctcgagggtgtacaccttgg 572
| ||||||||| ||||||||||||||| | |||||||
Sbjct: 97 aggcgtgcttggcgacctcctcgagggtgaagaccttgg 59
>gb|BM100618.2|BM100618 EBma01_SQ005_L24_R maternal, 4 DPA, no treatment, cv Optic, EBma01
Hordeum vulgare subsp. vulgare cDNA clone
EBma01_SQ005_L24 5', mRNA sequence
Length = 638
Score = 387 bits (195), Expect = e-106
Identities = 348/399 (87%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 486 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 427
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 426 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 367
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 366 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 307
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 306 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 247
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
||||||| || ||||||||||| ||||||||||| || || |||||||||||||| || |
Sbjct: 246 catcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcat 187
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 186 caaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttgg 127
Query: 534 tgttgtgcttggccacctcctcgagggtgtacaccttgg 572
| ||||||||| ||||||||||||||| | |||||||
Sbjct: 126 aggcgtgcttggcgacctcctcgagggtgaagaccttgg 88
>gb|BM373014.2|BM373014 EBma04_SQ002_L24_R maternal, 10 DPA, no treatment, cv Optic, EBma04
Hordeum vulgare subsp. vulgare cDNA clone
EBma04_SQ002_L24 5', mRNA sequence
Length = 594
Score = 387 bits (195), Expect = e-106
Identities = 348/399 (87%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 482 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 423
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 422 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 363
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 362 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 303
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 302 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 243
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
||||||| || ||||||||||| ||||||||||| || || |||||||||||||| || |
Sbjct: 242 catcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcat 183
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 182 caaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttgg 123
Query: 534 tgttgtgcttggccacctcctcgagggtgtacaccttgg 572
| ||||||||| ||||||||||||||| | |||||||
Sbjct: 122 aggcgtgcttggcgacctcctcgagggtgaagaccttgg 84
>gb|BM371900.2|BM371900 EBma08_SQ004_G02_R maternal, 28 DPA, no treatment, cv Optic, EBma08
Hordeum vulgare subsp. vulgare cDNA clone
EBma08_SQ004_G02 5', mRNA sequence
Length = 581
Score = 387 bits (195), Expect = e-106
Identities = 348/399 (87%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 500 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 441
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 440 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 381
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 380 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 321
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 320 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 261
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
||||||| || ||||||||||| ||||||||||| || || |||||||||||||| || |
Sbjct: 260 catcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcat 201
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 200 caaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttgg 141
Query: 534 tgttgtgcttggccacctcctcgagggtgtacaccttgg 572
| ||||||||| ||||||||||||||| | |||||||
Sbjct: 140 aggcgtgcttggcgacctcctcgagggtgaagaccttgg 102
>gb|BM374340.2|BM374340 EBpi03_SQ003_F16_R pistil, 4 DPA, no treatment, cv Optic, EBpi03
Hordeum vulgare subsp. vulgare cDNA clone
EBpi03_SQ003_F16 5', mRNA sequence
Length = 615
Score = 387 bits (195), Expect = e-106
Identities = 348/399 (87%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 482 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 423
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 422 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 363
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 362 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 303
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 302 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 243
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
||||||| || ||||||||||| ||||||||||| || || |||||||||||||| || |
Sbjct: 242 catcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcat 183
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 182 caaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttgg 123
Query: 534 tgttgtgcttggccacctcctcgagggtgtacaccttgg 572
| ||||||||| ||||||||||||||| | |||||||
Sbjct: 122 aggcgtgcttggcgacctcctcgagggtgaagaccttgg 84
>gb|BM097310.2|BM097310 EBro01_SQ004_L19_R root, 3 week, hydroponic grown, no treatment, cv
Optic, EBro01 Hordeum vulgare subsp. vulgare cDNA clone
EBro01_SQ004_L19 5', mRNA sequence
Length = 537
Score = 387 bits (195), Expect = e-106
Identities = 348/399 (87%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 493 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 434
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 433 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 374
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 373 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 314
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 313 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 254
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
||||||| || ||||||||||| ||||||||||| || || |||||||||||||| || |
Sbjct: 253 catcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcat 194
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 193 caaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttgg 134
Query: 534 tgttgtgcttggccacctcctcgagggtgtacaccttgg 572
| ||||||||| ||||||||||||||| | |||||||
Sbjct: 133 aggcgtgcttggcgacctcctcgagggtgaagaccttgg 95
>gb|BM440934.2|BM440934 EBro08_SQ004_P05_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ004_P05 5', mRNA sequence
Length = 680
Score = 387 bits (195), Expect = e-106
Identities = 348/399 (87%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 486 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 427
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 426 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 367
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 366 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 307
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 306 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 247
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
||||||| || ||||||||||| ||||||||||| || || |||||||||||||| || |
Sbjct: 246 catcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcat 187
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 186 caaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttgg 127
Query: 534 tgttgtgcttggccacctcctcgagggtgtacaccttgg 572
| ||||||||| ||||||||||||||| | |||||||
Sbjct: 126 aggcgtgcttggcgacctcctcgagggtgaagaccttgg 88
>gb|BQ760070.1|BQ760070 EBpi07_SQ003_I06_R pistil, 12 DPA, no treatment, cv Optic, EBpi07
Hordeum vulgare subsp. vulgare cDNA clone
EBpi07_SQ003_I06 5', mRNA sequence
Length = 633
Score = 387 bits (195), Expect = e-106
Identities = 348/399 (87%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 493 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 434
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 433 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 374
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 373 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 314
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 313 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 254
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
||||||| || ||||||||||| ||||||||||| || || |||||||||||||| || |
Sbjct: 253 catcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcat 194
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 193 caaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttgg 134
Query: 534 tgttgtgcttggccacctcctcgagggtgtacaccttgg 572
| ||||||||| ||||||||||||||| | |||||||
Sbjct: 133 aggcgtgcttggcgacctcctcgagggtgaagaccttgg 95
>gb|BQ764689.1|BQ764689 EBca01_SQ004_I17_R carpel, pre-anthesis, no treatment, cv Optic,
EBca01 Hordeum vulgare subsp. vulgare cDNA clone
EBca01_SQ004_I17 5', mRNA sequence
Length = 621
Score = 387 bits (195), Expect = e-106
Identities = 348/399 (87%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 496 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 437
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 436 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 377
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 376 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 317
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 316 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 257
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
||||||| || ||||||||||| ||||||||||| || || |||||||||||||| || |
Sbjct: 256 catcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcat 197
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 196 caaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttgg 137
Query: 534 tgttgtgcttggccacctcctcgagggtgtacaccttgg 572
| ||||||||| ||||||||||||||| | |||||||
Sbjct: 136 aggcgtgcttggcgacctcctcgagggtgaagaccttgg 98
>gb|BQ765183.1|BQ765183 EBro03_SQ006_M09_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ006_M09 5', mRNA sequence
Length = 725
Score = 387 bits (195), Expect = e-106
Identities = 348/399 (87%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 493 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 434
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 433 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 374
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 373 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 314
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 313 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 254
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
||||||| || ||||||||||| ||||||||||| || || |||||||||||||| || |
Sbjct: 253 catcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcat 194
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 193 caaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttgg 134
Query: 534 tgttgtgcttggccacctcctcgagggtgtacaccttgg 572
| ||||||||| ||||||||||||||| | |||||||
Sbjct: 133 aggcgtgcttggcgacctcctcgagggtgaagaccttgg 95
>gb|BQ765755.1|BQ765755 EBro03_SQ008_G04_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ008_G04 5', mRNA sequence
Length = 720
Score = 387 bits (195), Expect = e-106
Identities = 348/399 (87%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 460 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 401
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 400 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 341
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 340 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 281
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 280 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 221
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
||||||| || ||||||||||| ||||||||||| || || |||||||||||||| || |
Sbjct: 220 catcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcat 161
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 160 caaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttgg 101
Query: 534 tgttgtgcttggccacctcctcgagggtgtacaccttgg 572
| ||||||||| ||||||||||||||| | |||||||
Sbjct: 100 aggcgtgcttggcgacctcctcgagggtgaagaccttgg 62
>gb|BQ767440.1|BQ767440 EBro08_SQ008_L24_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ008_L24 5', mRNA sequence
Length = 516
Score = 387 bits (195), Expect = e-106
Identities = 348/399 (87%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 491 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 432
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 431 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 372
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 371 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 312
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 311 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 252
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
||||||| || ||||||||||| ||||||||||| || || |||||||||||||| || |
Sbjct: 251 catcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcat 192
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 191 caaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttgg 132
Query: 534 tgttgtgcttggccacctcctcgagggtgtacaccttgg 572
| ||||||||| ||||||||||||||| | |||||||
Sbjct: 131 aggcgtgcttggcgacctcctcgagggtgaagaccttgg 93
>gb|BU967504.1|BU967504 HB04H19r BC Hordeum vulgare subsp. vulgare cDNA clone HB04H19
5-PRIME, mRNA sequence
Length = 605
Score = 387 bits (195), Expect = e-106
Identities = 348/399 (87%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 521 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 462
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 461 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 402
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 401 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 342
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 341 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 282
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
||||||| || ||||||||||| ||||||||||| || || |||||||||||||| || |
Sbjct: 281 catcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcat 222
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 221 caaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttgg 162
Query: 534 tgttgtgcttggccacctcctcgagggtgtacaccttgg 572
| ||||||||| ||||||||||||||| | |||||||
Sbjct: 161 aggcgtgcttggcgacctcctcgagggtgaagaccttgg 123
>gb|BU972882.1|BU972882 HB23A11r BC Hordeum vulgare subsp. vulgare cDNA clone HB23A11
5-PRIME, mRNA sequence
Length = 583
Score = 387 bits (195), Expect = e-106
Identities = 348/399 (87%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 498 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 439
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 438 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 379
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 378 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 319
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 318 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 259
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
||||||| || ||||||||||| ||||||||||| || || |||||||||||||| || |
Sbjct: 258 catcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcat 199
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 198 caaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttgg 139
Query: 534 tgttgtgcttggccacctcctcgagggtgtacaccttgg 572
| ||||||||| ||||||||||||||| | |||||||
Sbjct: 138 aggcgtgcttggcgacctcctcgagggtgaagaccttgg 100
>gb|BU979395.1|BU979395 HA16A08r HA Hordeum vulgare subsp. vulgare cDNA clone HA16A08
5-PRIME, mRNA sequence
Length = 582
Score = 387 bits (195), Expect = e-106
Identities = 348/399 (87%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 500 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 441
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 440 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 381
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 380 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 321
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 320 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 261
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
||||||| || ||||||||||| ||||||||||| || || |||||||||||||| || |
Sbjct: 260 catcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcat 201
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 200 caaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttgg 141
Query: 534 tgttgtgcttggccacctcctcgagggtgtacaccttgg 572
| ||||||||| ||||||||||||||| | |||||||
Sbjct: 140 aggcgtgcttggcgacctcctcgagggtgaagaccttgg 102
>gb|BU980947.1|BU980947 HA22C19r HA Hordeum vulgare subsp. vulgare cDNA clone HA22C19
5-PRIME, mRNA sequence
Length = 588
Score = 387 bits (195), Expect = e-106
Identities = 348/399 (87%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 502 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 443
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 442 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 383
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 382 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 323
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 322 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 263
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
||||||| || ||||||||||| ||||||||||| || || |||||||||||||| || |
Sbjct: 262 catcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcat 203
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 202 caaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttgg 143
Query: 534 tgttgtgcttggccacctcctcgagggtgtacaccttgg 572
| ||||||||| ||||||||||||||| | |||||||
Sbjct: 142 aggcgtgcttggcgacctcctcgagggtgaagaccttgg 104
>gb|BU981698.1|BU981698 HA24F23r HA Hordeum vulgare subsp. vulgare cDNA clone HA24F23
5-PRIME, mRNA sequence
Length = 561
Score = 387 bits (195), Expect = e-106
Identities = 348/399 (87%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 502 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 443
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 442 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 383
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 382 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 323
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 322 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 263
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
||||||| || ||||||||||| ||||||||||| || || |||||||||||||| || |
Sbjct: 262 catcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcat 203
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 202 caaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttgg 143
Query: 534 tgttgtgcttggccacctcctcgagggtgtacaccttgg 572
| ||||||||| ||||||||||||||| | |||||||
Sbjct: 142 aggcgtgcttggcgacctcctcgagggtgaagaccttgg 104
>gb|BU983769.1|BU983769 HA30P23r HA Hordeum vulgare subsp. vulgare cDNA clone HA30P23
5-PRIME, mRNA sequence
Length = 597
Score = 387 bits (195), Expect = e-106
Identities = 348/399 (87%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 510 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 451
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 450 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 391
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 390 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 331
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 330 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 271
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
||||||| || ||||||||||| ||||||||||| || || |||||||||||||| || |
Sbjct: 270 catcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcat 211
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 210 caaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttgg 151
Query: 534 tgttgtgcttggccacctcctcgagggtgtacaccttgg 572
| ||||||||| ||||||||||||||| | |||||||
Sbjct: 150 aggcgtgcttggcgacctcctcgagggtgaagaccttgg 112
>gb|BU987123.1|BU987123 HF13N21r HF Hordeum vulgare subsp. vulgare cDNA clone HF13N21
5-PRIME, mRNA sequence
Length = 583
Score = 387 bits (195), Expect = e-106
Identities = 348/399 (87%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 467 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 408
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 407 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 348
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 347 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 288
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 287 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 228
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
||||||| || ||||||||||| ||||||||||| || || |||||||||||||| || |
Sbjct: 227 catcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcat 168
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 167 caaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttgg 108
Query: 534 tgttgtgcttggccacctcctcgagggtgtacaccttgg 572
| ||||||||| ||||||||||||||| | |||||||
Sbjct: 107 aggcgtgcttggcgacctcctcgagggtgaagaccttgg 69
>gb|BU994118.1|BU994118 HM05M20r HM Hordeum vulgare subsp. vulgare cDNA clone HM05M20
5-PRIME, mRNA sequence
Length = 586
Score = 387 bits (195), Expect = e-106
Identities = 348/399 (87%)
Strand = Plus / Plus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 166 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 225
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 226 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 285
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 286 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 345
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 346 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 405
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
||||||| || ||||||||||| ||||||||||| || || |||||||||||||| || |
Sbjct: 406 catcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcat 465
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 466 caaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttgg 525
Query: 534 tgttgtgcttggccacctcctcgagggtgtacaccttgg 572
| ||||||||| ||||||||||||||| | |||||||
Sbjct: 526 aggcgtgcttggcgacctcctcgagggtgaagaccttgg 564
>gb|BU996429.1|BU996429 HM13J06r HM Hordeum vulgare subsp. vulgare cDNA clone HM13J06
5-PRIME, mRNA sequence
Length = 635
Score = 387 bits (195), Expect = e-106
Identities = 348/399 (87%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 460 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 401
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 400 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 341
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 340 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 281
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 280 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 221
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
||||||| || ||||||||||| ||||||||||| || || |||||||||||||| || |
Sbjct: 220 catcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcat 161
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 160 caaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttgg 101
Query: 534 tgttgtgcttggccacctcctcgagggtgtacaccttgg 572
| ||||||||| ||||||||||||||| | |||||||
Sbjct: 100 aggcgtgcttggcgacctcctcgagggtgaagaccttgg 62
>gb|CA007312.1|CA007312 HU07I04r HU Hordeum vulgare subsp. vulgare cDNA clone HU07I04
5-PRIME, mRNA sequence
Length = 613
Score = 387 bits (195), Expect = e-106
Identities = 348/399 (87%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 513 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 454
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 453 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 394
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 393 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 334
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 333 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 274
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
||||||| || ||||||||||| ||||||||||| || || |||||||||||||| || |
Sbjct: 273 catcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcat 214
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 213 caaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttgg 154
Query: 534 tgttgtgcttggccacctcctcgagggtgtacaccttgg 572
| ||||||||| ||||||||||||||| | |||||||
Sbjct: 153 aggcgtgcttggcgacctcctcgagggtgaagaccttgg 115
>gb|CA007385.1|CA007385 HU07M11r HU Hordeum vulgare subsp. vulgare cDNA clone HU07M11
5-PRIME, mRNA sequence
Length = 597
Score = 387 bits (195), Expect = e-106
Identities = 348/399 (87%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 513 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 454
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 453 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 394
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 393 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 334
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 333 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 274
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
||||||| || ||||||||||| ||||||||||| || || |||||||||||||| || |
Sbjct: 273 catcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcat 214
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 213 caaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttgg 154
Query: 534 tgttgtgcttggccacctcctcgagggtgtacaccttgg 572
| ||||||||| ||||||||||||||| | |||||||
Sbjct: 153 aggcgtgcttggcgacctcctcgagggtgaagaccttgg 115
>gb|CA013256.1|CA013256 HT07N14r HT Hordeum vulgare subsp. vulgare cDNA clone HT07N14
5-PRIME, mRNA sequence
Length = 515
Score = 387 bits (195), Expect = e-106
Identities = 348/399 (87%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 459 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 400
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 399 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 340
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 339 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 280
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 279 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 220
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
||||||| || ||||||||||| ||||||||||| || || |||||||||||||| || |
Sbjct: 219 catcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcat 160
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 159 caaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttgg 100
Query: 534 tgttgtgcttggccacctcctcgagggtgtacaccttgg 572
| ||||||||| ||||||||||||||| | |||||||
Sbjct: 99 aggcgtgcttggcgacctcctcgagggtgaagaccttgg 61
>gb|CA015363.1|CA015363 HT14B06r HT Hordeum vulgare subsp. vulgare cDNA clone HT14B06
5-PRIME, mRNA sequence
Length = 612
Score = 387 bits (195), Expect = e-106
Identities = 348/399 (87%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 488 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 429
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 428 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 369
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 368 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 309
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 308 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 249
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
||||||| || ||||||||||| ||||||||||| || || |||||||||||||| || |
Sbjct: 248 catcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcat 189
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 188 caaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttgg 129
Query: 534 tgttgtgcttggccacctcctcgagggtgtacaccttgg 572
| ||||||||| ||||||||||||||| | |||||||
Sbjct: 128 aggcgtgcttggcgacctcctcgagggtgaagaccttgg 90
>gb|CA020519.1|CA020519 HZ36I22r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ36I22
5-PRIME, mRNA sequence
Length = 598
Score = 387 bits (195), Expect = e-106
Identities = 348/399 (87%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 533 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 474
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 473 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 414
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 413 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 354
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 353 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 294
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
||||||| || ||||||||||| ||||||||||| || || |||||||||||||| || |
Sbjct: 293 catcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcat 234
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 233 caaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttgg 174
Query: 534 tgttgtgcttggccacctcctcgagggtgtacaccttgg 572
| ||||||||| ||||||||||||||| | |||||||
Sbjct: 173 aggcgtgcttggcgacctcctcgagggtgaagaccttgg 135
>gb|CA020743.1|CA020743 HZ37H18r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ37H18
5-PRIME, mRNA sequence
Length = 584
Score = 387 bits (195), Expect = e-106
Identities = 348/399 (87%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 502 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 443
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 442 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 383
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 382 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 323
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 322 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 263
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
||||||| || ||||||||||| ||||||||||| || || |||||||||||||| || |
Sbjct: 262 catcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcat 203
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 202 caaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttgg 143
Query: 534 tgttgtgcttggccacctcctcgagggtgtacaccttgg 572
| ||||||||| ||||||||||||||| | |||||||
Sbjct: 142 aggcgtgcttggcgacctcctcgagggtgaagaccttgg 104
>gb|CA023512.1|CA023512 HZ46H15r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ46H15
5-PRIME, mRNA sequence
Length = 569
Score = 387 bits (195), Expect = e-106
Identities = 348/399 (87%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 502 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 443
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 442 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 383
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 382 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 323
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 322 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 263
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
||||||| || ||||||||||| ||||||||||| || || |||||||||||||| || |
Sbjct: 262 catcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcat 203
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 202 caaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttgg 143
Query: 534 tgttgtgcttggccacctcctcgagggtgtacaccttgg 572
| ||||||||| ||||||||||||||| | |||||||
Sbjct: 142 aggcgtgcttggcgacctcctcgagggtgaagaccttgg 104
>gb|BJ547051.1|BJ547051 BJ547051 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal37n19 5', mRNA sequence
Length = 570
Score = 387 bits (195), Expect = e-106
Identities = 348/399 (87%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 513 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 454
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 453 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 394
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 393 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 334
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 333 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 274
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
||||||| || ||||||||||| ||||||||||| || || |||||||||||||| || |
Sbjct: 273 catcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcat 214
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 213 caaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttgg 154
Query: 534 tgttgtgcttggccacctcctcgagggtgtacaccttgg 572
| ||||||||| ||||||||||||||| | |||||||
Sbjct: 153 aggcgtgcttggcgacctcctcgagggtgaagaccttgg 115
>gb|BJ547191.1|BJ547191 BJ547191 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal24b10 5', mRNA sequence
Length = 590
Score = 387 bits (195), Expect = e-106
Identities = 348/399 (87%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 505 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 446
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 445 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 386
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 385 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 326
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 325 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 266
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
||||||| || ||||||||||| ||||||||||| || || |||||||||||||| || |
Sbjct: 265 catcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcat 206
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 205 caaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttgg 146
Query: 534 tgttgtgcttggccacctcctcgagggtgtacaccttgg 572
| ||||||||| ||||||||||||||| | |||||||
Sbjct: 145 aggcgtgcttggcgacctcctcgagggtgaagaccttgg 107
>gb|BJ547281.1|BJ547281 BJ547281 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal29j05 5', mRNA sequence
Length = 617
Score = 387 bits (195), Expect = e-106
Identities = 348/399 (87%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 490 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 431
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 430 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 371
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 370 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 311
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 310 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 251
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
||||||| || ||||||||||| ||||||||||| || || |||||||||||||| || |
Sbjct: 250 catcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcat 191
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 190 caaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttgg 131
Query: 534 tgttgtgcttggccacctcctcgagggtgtacaccttgg 572
| ||||||||| ||||||||||||||| | |||||||
Sbjct: 130 aggcgtgcttggcgacctcctcgagggtgaagaccttgg 92
>gb|BJ547629.1|BJ547629 BJ547629 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal33h18 5', mRNA sequence
Length = 623
Score = 387 bits (195), Expect = e-106
Identities = 348/399 (87%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 490 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 431
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 430 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 371
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 370 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 311
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 310 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 251
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
||||||| || ||||||||||| ||||||||||| || || |||||||||||||| || |
Sbjct: 250 catcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcat 191
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 190 caaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttgg 131
Query: 534 tgttgtgcttggccacctcctcgagggtgtacaccttgg 572
| ||||||||| ||||||||||||||| | |||||||
Sbjct: 130 aggcgtgcttggcgacctcctcgagggtgaagaccttgg 92
>gb|BJ547695.1|BJ547695 BJ547695 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal34p18 5', mRNA sequence
Length = 651
Score = 387 bits (195), Expect = e-106
Identities = 348/399 (87%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 488 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 429
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 428 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 369
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 368 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 309
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 308 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 249
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
||||||| || ||||||||||| ||||||||||| || || |||||||||||||| || |
Sbjct: 248 catcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcat 189
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 188 caaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttgg 129
Query: 534 tgttgtgcttggccacctcctcgagggtgtacaccttgg 572
| ||||||||| ||||||||||||||| | |||||||
Sbjct: 128 aggcgtgcttggcgacctcctcgagggtgaagaccttgg 90
>gb|BJ549153.1|BJ549153 BJ549153 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags24g22 5', mRNA sequence
Length = 618
Score = 387 bits (195), Expect = e-106
Identities = 348/399 (87%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 490 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 431
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 430 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 371
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 370 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 311
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 310 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 251
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
||||||| || ||||||||||| ||||||||||| || || |||||||||||||| || |
Sbjct: 250 catcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcat 191
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 190 caaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttgg 131
Query: 534 tgttgtgcttggccacctcctcgagggtgtacaccttgg 572
| ||||||||| ||||||||||||||| | |||||||
Sbjct: 130 aggcgtgcttggcgacctcctcgagggtgaagaccttgg 92
>gb|BJ549515.1|BJ549515 BJ549515 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags36l01 5', mRNA sequence
Length = 617
Score = 387 bits (195), Expect = e-106
Identities = 348/399 (87%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 433 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 374
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 373 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 314
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 313 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 254
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 253 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 194
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
||||||| || ||||||||||| ||||||||||| || || |||||||||||||| || |
Sbjct: 193 catcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcat 134
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 133 caaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttgg 74
Query: 534 tgttgtgcttggccacctcctcgagggtgtacaccttgg 572
| ||||||||| ||||||||||||||| | |||||||
Sbjct: 73 aggcgtgcttggcgacctcctcgagggtgaagaccttgg 35
>gb|CB882543.1|CB882543 HL02C17w HL Hordeum vulgare subsp. vulgare cDNA clone HL02C17
3-PRIME, mRNA sequence
Length = 637
Score = 387 bits (195), Expect = e-106
Identities = 348/399 (87%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 493 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 434
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 433 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 374
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 373 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 314
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 313 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 254
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
||||||| || ||||||||||| ||||||||||| || || |||||||||||||| || |
Sbjct: 253 catcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcat 194
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 193 caaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttgg 134
Query: 534 tgttgtgcttggccacctcctcgagggtgtacaccttgg 572
| ||||||||| ||||||||||||||| | |||||||
Sbjct: 133 aggcgtgcttggcgacctcctcgagggtgaagaccttgg 95
>gb|CB883400.1|CB883400 HQ02C06w HQ Hordeum vulgare subsp. vulgare cDNA clone HQ02C06
3-PRIME, mRNA sequence
Length = 647
Score = 387 bits (195), Expect = e-106
Identities = 348/399 (87%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 516 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 457
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 456 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 397
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 396 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 337
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 336 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 277
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
||||||| || ||||||||||| ||||||||||| || || |||||||||||||| || |
Sbjct: 276 catcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcat 217
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 216 caaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttgg 157
Query: 534 tgttgtgcttggccacctcctcgagggtgtacaccttgg 572
| ||||||||| ||||||||||||||| | |||||||
Sbjct: 156 aggcgtgcttggcgacctcctcgagggtgaagaccttgg 118
>gb|CK124983.1|CK124983 BES1824111A2f06 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010F0611 5-PRIME, mRNA sequence
Length = 753
Score = 387 bits (195), Expect = e-106
Identities = 348/399 (87%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 492 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 433
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 432 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 373
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 372 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 313
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 312 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 253
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
||||||| || ||||||||||| ||||||||||| || || |||||||||||||| || |
Sbjct: 252 catcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcat 193
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 192 caaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttgg 133
Query: 534 tgttgtgcttggccacctcctcgagggtgtacaccttgg 572
| ||||||||| ||||||||||||||| | |||||||
Sbjct: 132 aggcgtgcttggcgacctcctcgagggtgaagaccttgg 94
>gb|CK125919.1|CK125919 BES1824111B1g11 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010G1111 5-PRIME, mRNA sequence
Length = 751
Score = 387 bits (195), Expect = e-106
Identities = 348/399 (87%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 490 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 431
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 430 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 371
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 370 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 311
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 310 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 251
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
||||||| || ||||||||||| ||||||||||| || || |||||||||||||| || |
Sbjct: 250 catcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcat 191
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 190 caaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttgg 131
Query: 534 tgttgtgcttggccacctcctcgagggtgtacaccttgg 572
| ||||||||| ||||||||||||||| | |||||||
Sbjct: 130 aggcgtgcttggcgacctcctcgagggtgaagaccttgg 92
>gb|BF623766.2|BF623766 HVSMEa0005K15f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0005K15f, mRNA sequence
Length = 495
Score = 385 bits (194), Expect = e-105
Identities = 347/398 (87%)
Strand = Plus / Minus
Query: 175 ctaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcgag 234
|||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || ||
Sbjct: 494 ctagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgccag 435
Query: 235 ggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagtg 294
||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||||
Sbjct: 434 ggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagtg 375
Query: 295 cggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcacc 354
||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| ||
Sbjct: 374 tggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgcc 315
Query: 355 cactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaatc 414
|| |||||||||||||||| || || || || ||||||| |||||||| || || ||
Sbjct: 314 gacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagtc 255
Query: 415 atcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcctc 474
|||||| || ||||||||||| ||||||||||| || || |||||||||||||| || ||
Sbjct: 254 atcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcatc 195
Query: 475 cagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttggt 534
|| ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 194 aaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttgga 135
Query: 535 gttgtgcttggccacctcctcgagggtgtacaccttgg 572
| ||||||||| ||||||||||||||| | |||||||
Sbjct: 134 ggcgtgcttggcgacctcctcgagggtgaagaccttgg 97
>gb|BM440862.2|BM440862 EBca01_SQ001_H13_R carpel, pre-anthesis, no treatment, cv Optic,
EBca01 Hordeum vulgare subsp. vulgare cDNA clone
EBca01_SQ001_H13 5', mRNA sequence
Length = 478
Score = 383 bits (193), Expect = e-105
Identities = 340/389 (87%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 392 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 333
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 332 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 273
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 272 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 213
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 212 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 153
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
||||||| || ||||||||||| ||||||||||| || || |||||||||||||| || |
Sbjct: 152 catcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcat 93
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 92 caaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttgg 33
Query: 534 tgttgtgcttggccacctcctcgagggtg 562
| ||||||||| |||||||||||||||
Sbjct: 32 aggcgtgcttggcgacctcctcgagggtg 4
>gb|BU989457.1|BU989457 HF21M17r HF Hordeum vulgare subsp. vulgare cDNA clone HF21M17
5-PRIME, mRNA sequence
Length = 538
Score = 383 bits (193), Expect = e-105
Identities = 340/389 (87%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 399 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 340
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 339 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 280
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 279 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 220
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 219 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 160
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
||||||| || ||||||||||| ||||||||||| || || |||||||||||||| || |
Sbjct: 159 catcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcat 100
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 99 caaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttgg 40
Query: 534 tgttgtgcttggccacctcctcgagggtg 562
| ||||||||| |||||||||||||||
Sbjct: 39 aggcgtgcttggcgacctcctcgagggtg 11
>gb|CA017918.1|CA017918 HV06M12r HV Hordeum vulgare subsp. vulgare cDNA clone HV06M12
5-PRIME, mRNA sequence
Length = 500
Score = 383 bits (193), Expect = e-105
Identities = 343/393 (87%)
Strand = Plus / Minus
Query: 180 cagattccgacttggtgtacatccttacagcgacggccagacccagtattgcgaggggga 239
|||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |||||||
Sbjct: 500 cagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgccaggggga 441
Query: 240 ccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagtgcggct 299
|||| ||||||||||||||||||| ||||||| |||||||||||||||||||||| ||||
Sbjct: 440 ccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagtgtggct 381
Query: 300 gcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcacccacta 359
||||||| ||| ||||||| ||||||||||||||||||| || || ||||| || ||
Sbjct: 380 gcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgccgacat 321
Query: 360 agtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaatcatcgg 419
|||||||||||||||| || || || || ||||||| |||||||| || || |||||||
Sbjct: 320 agtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagtcatcgg 261
Query: 420 tagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcctccagaa 479
| || ||||||||||| ||||||||||| || || |||||||||||||| || || || |
Sbjct: 260 tcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcatcaagga 201
Query: 480 acttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttggtgttgt 539
|||||||||||||||||||||||||| ||||||| ||||||||||||||||||| | ||
Sbjct: 200 acttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttggaggcgt 141
Query: 540 gcttggccacctcctcgagggtgtacaccttgg 572
||||||| ||||||||||||||| | |||||||
Sbjct: 140 gcttggcgacctcctcgagggtgaagaccttgg 108
>gb|CA027236.1|CA027236 HZ58E16r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ58E16
5-PRIME, mRNA sequence
Length = 479
Score = 383 bits (193), Expect = e-105
Identities = 343/393 (87%)
Strand = Plus / Minus
Query: 180 cagattccgacttggtgtacatccttacagcgacggccagacccagtattgcgaggggga 239
|||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |||||||
Sbjct: 478 cagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgccaggggga 419
Query: 240 ccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagtgcggct 299
|||| ||||||||||||||||||| ||||||| |||||||||||||||||||||| ||||
Sbjct: 418 ccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagtgtggct 359
Query: 300 gcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcacccacta 359
||||||| ||| ||||||| ||||||||||||||||||| || || ||||| || ||
Sbjct: 358 gcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgccgacat 299
Query: 360 agtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaatcatcgg 419
|||||||||||||||| || || || || ||||||| |||||||| || || |||||||
Sbjct: 298 agtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagtcatcgg 239
Query: 420 tagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcctccagaa 479
| || ||||||||||| ||||||||||| || || |||||||||||||| || || || |
Sbjct: 238 tcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcatcaagga 179
Query: 480 acttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttggtgttgt 539
|||||||||||||||||||||||||| ||||||| ||||||||||||||||||| | ||
Sbjct: 178 acttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttggaggcgt 119
Query: 540 gcttggccacctcctcgagggtgtacaccttgg 572
||||||| ||||||||||||||| | |||||||
Sbjct: 118 gcttggcgacctcctcgagggtgaagaccttgg 86
>gb|CB880779.1|CB880779 HM07M20w HM Hordeum vulgare subsp. vulgare cDNA clone HM07M20
3-PRIME, mRNA sequence
Length = 544
Score = 383 bits (193), Expect = e-105
Identities = 340/389 (87%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 470 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 411
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 410 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 351
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 350 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 291
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 290 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 231
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
||||||| || ||||||||||| ||||||||||| || || |||||||||||||| || |
Sbjct: 230 catcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcat 171
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 170 caaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttgg 111
Query: 534 tgttgtgcttggccacctcctcgagggtg 562
| ||||||||| |||||||||||||||
Sbjct: 110 aggcgtgcttggcgacctcctcgagggtg 82
>gb|BG300273.1|BG300273 HVSMEb0011O02f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0011O02f, mRNA sequence
Length = 513
Score = 381 bits (192), Expect = e-104
Identities = 348/400 (87%)
Strand = Plus / Minus
Query: 173 gactaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcg 232
|||||| |||| || ||||||||||| |||| ||| ||||||||||| |||||||| ||
Sbjct: 419 gactagacagactctgacttggtgtagatccgtacggcgacggccaggcccagtatcgcc 360
Query: 233 agggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtag 292
||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||
Sbjct: 359 agggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtag 300
Query: 293 tgcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctca 352
|| ||||||||||| ||| ||||||| ||||||||||||||||||| || || |||||
Sbjct: 299 tgtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcg 240
Query: 353 cccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaa 412
|| || |||||||||||||||| || || || || ||||||| |||||||| || ||
Sbjct: 239 ccgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaag 180
Query: 413 tcatcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcc 472
|||||||| || ||||||||||| ||||||||||| || || |||||||||||||| ||
Sbjct: 179 tcatcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtca 120
Query: 473 tccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttg 532
|| || ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||
Sbjct: 119 tcaaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttg 60
Query: 533 gtgttgtgcttggccacctcctcgagggtgtacaccttgg 572
| | ||||||||| ||||||||||||||| | |||||||
Sbjct: 59 gaggcgtgcttggcgacctcctcgagggtgaagaccttgg 20
>gb|BM097559.2|BM097559 EBem04_SQ002_A16_R embryo, 12 DPA, no treatment, cv Optic, EBem04
Hordeum vulgare subsp. vulgare cDNA clone
EBem04_SQ002_A16 5', mRNA sequence
Length = 492
Score = 381 bits (192), Expect = e-104
Identities = 339/388 (87%)
Strand = Plus / Minus
Query: 185 tccgacttggtgtacatccttacagcgacggccagacccagtattgcgagggggaccaaa 244
|||||||||||||| |||| ||| ||||||||||| |||||||| || |||||||||||
Sbjct: 489 tccgacttggtgtagatccgtacggcgacggccaggcccagtatcgccagggggaccaag 430
Query: 245 aactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagtgcggctgcttg 304
||||||||||||||||||| ||||||| |||||||||||||||||||||| |||||||||
Sbjct: 429 aactggaggatcttgatgatgaactccggggtcttgtcctggttgtagtgtggctgcttg 370
Query: 305 gggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcacccactaagtac 364
|| ||| ||||||| ||||||||||||||||||| || || ||||| || || |||||
Sbjct: 369 ggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgccgacatagtac 310
Query: 365 tcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaatcatcggtagca 424
||||||||||| || || || || ||||||| |||||||| || || |||||||| ||
Sbjct: 309 tcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagtcatcggtcgcg 250
Query: 425 tccttggcagtggaagacagcagaacatcatcgcctccagggtgatcctccagaaacttg 484
||||||||||| ||||||||||| || || |||||||||||||| || || || ||||||
Sbjct: 249 tccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcatcaaggaacttg 190
Query: 485 gtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttggtgttgtgcttg 544
||||||||||||||||||||| ||||||| ||||||||||||||||||| | |||||||
Sbjct: 189 gtcacattgtacaccttgccggcgatgactagccagcagtcgtccttggaggcgtgcttg 130
Query: 545 gccacctcctcgagggtgtacaccttgg 572
|| ||||||||||||||| | |||||||
Sbjct: 129 gcgacctcctcgagggtgaagaccttgg 102
>gb|BJ548957.1|BJ548957 BJ548957 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal40d17 3', mRNA sequence
Length = 648
Score = 381 bits (192), Expect = e-104
Identities = 347/399 (86%)
Strand = Plus / Plus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 225 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 284
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 285 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 344
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 345 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 404
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 405 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 464
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
||||||| || ||||||||||| ||||||||||| || || |||||||||||||| || |
Sbjct: 465 catcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcat 524
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 525 caaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttgg 584
Query: 534 tgttgtgcttggccacctcctcgagggtgtacaccttgg 572
| ||||||||| |||| |||||||||| | |||||||
Sbjct: 585 aggcgtgcttggcgacctnctcgagggtgaagaccttgg 623
>gb|BF623758.2|BF623758 HVSMEa0005I23f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0005I23f, mRNA sequence
Length = 502
Score = 379 bits (191), Expect = e-104
Identities = 347/399 (86%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 495 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 436
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 435 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 376
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| |||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 375 gtggctgcttggacggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 316
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 315 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 256
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
||||||| || ||||||||||| ||||||||||| || || |||||||||||||| || |
Sbjct: 255 catcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcat 196
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 195 caaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttgg 136
Query: 534 tgttgtgcttggccacctcctcgagggtgtacaccttgg 572
| ||||||||| ||||||||||||||| | |||||||
Sbjct: 135 aggcgtgcttggcgacctcctcgagggtgaagaccttgg 97
>gb|BE216074.1|BE216074 HV_CEb0009F07f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0009F07f, mRNA sequence
Length = 570
Score = 379 bits (191), Expect = e-104
Identities = 347/399 (86%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| |||||| |||| |||||||| || |
Sbjct: 480 actagacagactccgacttggtgtagatccgtacggcgacgcccaggcccagtatcgcca 421
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 420 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 361
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 360 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 301
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 300 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 241
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
||||||| || ||||||||||| ||||||||||| || || |||||||||||||| || |
Sbjct: 240 catcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcat 181
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 180 caaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttgg 121
Query: 534 tgttgtgcttggccacctcctcgagggtgtacaccttgg 572
| ||||||||| ||||||||||||||| | |||||||
Sbjct: 120 aggcgtgcttggcgacctcctcgagggtgaagaccttgg 82
>gb|CA020754.1|CA020754 HZ37J03r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ37J03
5-PRIME, mRNA sequence
Length = 516
Score = 377 bits (190), Expect = e-103
Identities = 342/393 (87%)
Strand = Plus / Minus
Query: 180 cagattccgacttggtgtacatccttacagcgacggccagacccagtattgcgaggggga 239
|||| |||||||||||||| |||| ||| ||||||||||| | |||||| || |||||||
Sbjct: 516 cagactccgacttggtgtagatccgtacggcgacggccaggcncagtatcgccaggggga 457
Query: 240 ccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagtgcggct 299
|||| ||||||||||||||||||| ||||||| |||||||||||||||||||||| ||||
Sbjct: 456 ccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagtgtggct 397
Query: 300 gcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcacccacta 359
||||||| ||| ||||||| ||||||||||||||||||| || || ||||| || ||
Sbjct: 396 gcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgccgacat 337
Query: 360 agtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaatcatcgg 419
|||||||||||||||| || || || || ||||||| |||||||| || || |||||||
Sbjct: 336 agtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagtcatcgg 277
Query: 420 tagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcctccagaa 479
| || ||||||||||| ||||||||||| || || |||||||||||||| || || || |
Sbjct: 276 tcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcatcaagga 217
Query: 480 acttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttggtgttgt 539
|||||||||||||||||||||||||| ||||||| ||||||||||||||||||| | ||
Sbjct: 216 acttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttggaggcgt 157
Query: 540 gcttggccacctcctcgagggtgtacaccttgg 572
||||||| ||||||||||||||| | |||||||
Sbjct: 156 gcttggcgacctcctcgagggtgaagaccttgg 124
>gb|BG417241.2|BG417241 HVSMEk0016P06f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0016P06f, mRNA sequence
Length = 474
Score = 373 bits (188), Expect = e-102
Identities = 335/384 (87%)
Strand = Plus / Minus
Query: 189 acttggtgtacatccttacagcgacggccagacccagtattgcgagggggaccaaaaact 248
|||||||||| |||| ||| ||||||||||| |||||||| || ||||||||||| ||||
Sbjct: 474 acttggtgtagatccgtacggcgacggccaggcccagtatcgccagggggaccaagaact 415
Query: 249 ggaggatcttgatgacgaactcctgggtcttgtcctggttgtagtgcggctgcttggggg 308
||||||||||||||| ||||||| |||||||||||||||||||||| ||||||||||| |
Sbjct: 414 ggaggatcttgatgatgaactccggggtcttgtcctggttgtagtgtggctgcttgggcg 355
Query: 309 gcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcacccactaagtactcgt 368
|| ||||||| ||||||||||||||||||| || || ||||| || || |||||||||
Sbjct: 354 gcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgccgacatagtactcgt 295
Query: 369 ccatcattgcacgggcagtgctgctgtgccccacatcttcgaaatcatcggtagcatcct 428
||||||| || || || || ||||||| |||||||| || || |||||||| || ||||
Sbjct: 294 ccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagtcatcggtcgcgtcct 235
Query: 429 tggcagtggaagacagcagaacatcatcgcctccagggtgatcctccagaaacttggtca 488
||||||| ||||||||||| || || |||||||||||||| || || || ||||||||||
Sbjct: 234 tggcagttgaagacagcaggacgtcgtcgcctccagggtggtcatcaaggaacttggtca 175
Query: 489 cattgtacaccttgccgccgatgacgagccagcagtcgtccttggtgttgtgcttggcca 548
||||||||||||||||| ||||||| ||||||||||||||||||| | ||||||||| |
Sbjct: 174 cattgtacaccttgccggcgatgactagccagcagtcgtccttggaggcgtgcttggcga 115
Query: 549 cctcctcgagggtgtacaccttgg 572
|||||||||||||| | |||||||
Sbjct: 114 cctcctcgagggtgaagaccttgg 91
>gb|AV933481.1|AV933481 AV933481 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal7b18 5', mRNA sequence
Length = 632
Score = 373 bits (188), Expect = e-102
Identities = 348/400 (87%), Gaps = 1/400 (0%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 509 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 450
Query: 234 gggggaccaaaaactggaggatcttga-tgacgaactcctgggtcttgtcctggttgtag 292
|||||||||| |||||||||||||||| ||| ||||||| ||||||||||||||||||||
Sbjct: 449 gggggaccaagaactggaggatcttgaatgatgaactccggggtcttgtcctggttgtag 390
Query: 293 tgcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctca 352
|| ||||||||||| ||| ||||||| ||||||||||||||||||| || || |||||
Sbjct: 389 tgtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcg 330
Query: 353 cccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaa 412
|| || |||||||||||||||| || || || || ||||||| |||||||| || ||
Sbjct: 329 ccgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaag 270
Query: 413 tcatcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcc 472
|||||||| || ||||||||||| ||||||||||| || || |||||||||||||| ||
Sbjct: 269 tcatcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtca 210
Query: 473 tccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttg 532
|| || ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||
Sbjct: 209 tcaaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttg 150
Query: 533 gtgttgtgcttggccacctcctcgagggtgtacaccttgg 572
| | ||||||||| ||||||||||||||| | |||||||
Sbjct: 149 gaggcgtgcttggcgacctcctcgagggtgaagaccttgg 110
>gb|AV933482.1|AV933482 AV933482 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal7b20 5', mRNA sequence
Length = 630
Score = 373 bits (188), Expect = e-102
Identities = 348/400 (87%), Gaps = 1/400 (0%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 509 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 450
Query: 234 gggggaccaaaaactggaggatcttga-tgacgaactcctgggtcttgtcctggttgtag 292
|||||||||| |||||||||||||||| ||| ||||||| ||||||||||||||||||||
Sbjct: 449 gggggaccaagaactggaggatcttgaatgatgaactccggggtcttgtcctggttgtag 390
Query: 293 tgcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctca 352
|| ||||||||||| ||| ||||||| ||||||||||||||||||| || || |||||
Sbjct: 389 tgtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcg 330
Query: 353 cccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaa 412
|| || |||||||||||||||| || || || || ||||||| |||||||| || ||
Sbjct: 329 ccgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaag 270
Query: 413 tcatcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcc 472
|||||||| || ||||||||||| ||||||||||| || || |||||||||||||| ||
Sbjct: 269 tcatcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtca 210
Query: 473 tccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttg 532
|| || ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||
Sbjct: 209 tcaaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttg 150
Query: 533 gtgttgtgcttggccacctcctcgagggtgtacaccttgg 572
| | ||||||||| ||||||||||||||| | |||||||
Sbjct: 149 gaggcgtgcttggcgacctcctcgagggtgaagaccttgg 110
>gb|AW983377.2|AW983377 HVSMEg0010G20f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0010G20f, mRNA sequence
Length = 796
Score = 371 bits (187), Expect = e-101
Identities = 346/399 (86%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| ||||| |||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 492 actagacagactccgatttggtgtagatccgtacggcgacggccaggcccagtatcgcca 433
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||| ||||||| ||||||| |||||||||||||||||||||
Sbjct: 432 gggggaccaagaactggaggattttgatgatgaactccggggtcttgtcctggttgtagt 373
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 372 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 313
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 312 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 253
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
||||||| || ||||||||||| ||||||||||| || || |||||||||||||| || |
Sbjct: 252 catcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcat 193
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 192 caaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttgg 133
Query: 534 tgttgtgcttggccacctcctcgagggtgtacaccttgg 572
| ||||||||| ||||||||||||||| | |||||||
Sbjct: 132 aggcgtgcttggcgacctcctcgagggtgaagaccttgg 94
>gb|BQ462545.1|BQ462545 HI01D19T HI Hordeum vulgare subsp. vulgare cDNA clone HI01D19
5-PRIME, mRNA sequence
Length = 528
Score = 371 bits (187), Expect = e-101
Identities = 346/399 (86%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| | |||||| || |
Sbjct: 492 actagacagactccgacttggtgtagatccgtacggcgacggccaggcgcagtatcgcca 433
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 432 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 373
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 372 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 313
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 312 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 253
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
||||||| || ||||||||||| ||||||||||| || || |||||||||||||| || |
Sbjct: 252 catcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcat 193
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
| || |||||||||||||||||| |||||||| ||||||| |||||||||||||||||||
Sbjct: 192 caaggaacttggtcacattgtacgccttgccggcgatgactagccagcagtcgtccttgg 133
Query: 534 tgttgtgcttggccacctcctcgagggtgtacaccttgg 572
| ||||||||| ||||||||||||||| | |||||||
Sbjct: 132 aggcgtgcttggcgacctcctcgagggtgaagaccttgg 94
>gb|BJ548892.1|BJ548892 BJ548892 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal37n19 3', mRNA sequence
Length = 597
Score = 369 bits (186), Expect = e-101
Identities = 333/382 (87%)
Strand = Plus / Plus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 216 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 275
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 276 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 335
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 336 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 395
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 396 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 455
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
||||||| || ||||||||||| ||||||||||| || || |||||||||||||| || |
Sbjct: 456 catcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcat 515
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 516 caaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttgg 575
Query: 534 tgttgtgcttggccacctcctc 555
| ||||||||| ||||||||
Sbjct: 576 aggcgtgcttggcgacctcctc 597
>gb|AV936784.1|AV936784 AV936784 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal7b20 3', mRNA sequence
Length = 606
Score = 367 bits (185), Expect = e-100
Identities = 332/381 (87%)
Strand = Plus / Plus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 226 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 285
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 286 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 345
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 346 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 405
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 406 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 465
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
||||||| || ||||||||||| ||||||||||| || || |||||||||||||| || |
Sbjct: 466 catcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcat 525
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 526 caaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttgg 585
Query: 534 tgttgtgcttggccacctcct 554
| ||||||||| |||||||
Sbjct: 586 aggcgtgcttggcgacctcct 606
>gb|BE559108.2|BE559108 HV_CEb0022O04f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0022O04f, mRNA sequence
Length = 686
Score = 363 bits (183), Expect = 5e-099
Identities = 346/399 (86%), Gaps = 1/399 (0%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 506 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 447
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||| ||||||| ||||||| |||||||||||||||||||||
Sbjct: 446 gggggaccaagaactggaggattttgatgatgaactccggggtcttgtcctggttgtagt 387
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| || |||||||||||||||| || || ||||| |
Sbjct: 386 gtggctgcttgggcggcatgtacttgac-ttggtgggtatcgtggtcgcgtcgatctcgc 328
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 327 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 268
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
||||||| || ||||||||||| ||||||||||| || || |||||||||||||| || |
Sbjct: 267 catcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcat 208
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 207 caaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttgg 148
Query: 534 tgttgtgcttggccacctcctcgagggtgtacaccttgg 572
| ||||||||| ||||||||||||||| | |||||||
Sbjct: 147 aggcgtgcttggcgacctcctcgagggtgaagaccttgg 109
>gb|BM368211.2|BM368211 EBed01_SQ002_H20_R endosperm, 6 DPA, no treatment, cv Optic, EBed01
Hordeum vulgare subsp. vulgare cDNA clone
EBed01_SQ002_H20 5', mRNA sequence
Length = 543
Score = 363 bits (183), Expect = 5e-099
Identities = 346/399 (86%), Gaps = 1/399 (0%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| ||||||| |||||| |||| ||| ||||||||||| ||||||| || |
Sbjct: 481 actagacagactccgact-ggtgtagatccgtacggcgacggccagggccagtatcgcca 423
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 422 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 363
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 362 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 303
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 302 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 243
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
||||||| || ||||||||||| ||||||||||| || || |||||||||||||| || |
Sbjct: 242 catcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcat 183
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 182 caaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttgg 123
Query: 534 tgttgtgcttggccacctcctcgagggtgtacaccttgg 572
| ||||||||| ||||||||||||||| | |||||||
Sbjct: 122 aggcgtgcttggcgacctcctcgagggtgaagaccttgg 84
>gb|AV918771.1|AV918771 AV918771 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags22d07 3', mRNA sequence
Length = 686
Score = 359 bits (181), Expect = 8e-098
Identities = 325/373 (87%)
Strand = Plus / Plus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 310 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 369
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 370 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 429
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 430 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 489
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 490 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 549
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
||||||| || ||||||||||| ||||||||||| || || |||||||||||||| || |
Sbjct: 550 catcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcat 609
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 610 caaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttgg 669
Query: 534 tgttgtgcttggc 546
| |||||||||
Sbjct: 670 aggcgtgcttggc 682
>gb|AV935668.1|AV935668 AV935668 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal5l24 3', mRNA sequence
Length = 699
Score = 359 bits (181), Expect = 8e-098
Identities = 325/373 (87%)
Strand = Plus / Plus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 323 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 382
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 383 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 442
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 443 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 502
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 503 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 562
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
||||||| || ||||||||||| ||||||||||| || || |||||||||||||| || |
Sbjct: 563 catcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcat 622
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 623 caaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttgg 682
Query: 534 tgttgtgcttggc 546
| |||||||||
Sbjct: 683 aggcgtgcttggc 695
>gb|AV935936.1|AV935936 AV935936 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal7b18 3', mRNA sequence
Length = 602
Score = 359 bits (181), Expect = 8e-098
Identities = 325/373 (87%)
Strand = Plus / Plus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 227 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 286
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 287 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 346
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 347 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 406
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 407 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 466
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
||||||| || ||||||||||| ||||||||||| || || |||||||||||||| || |
Sbjct: 467 catcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcat 526
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 527 caaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttgg 586
Query: 534 tgttgtgcttggc 546
| |||||||||
Sbjct: 587 aggcgtgcttggc 599
>gb|BJ548520.1|BJ548520 BJ548520 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal29j05 3', mRNA sequence
Length = 698
Score = 359 bits (181), Expect = 8e-098
Identities = 325/373 (87%)
Strand = Plus / Plus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 323 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 382
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 383 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 442
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 443 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 502
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 503 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 562
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
||||||| || ||||||||||| ||||||||||| || || |||||||||||||| || |
Sbjct: 563 catcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcat 622
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 623 caaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttgg 682
Query: 534 tgttgtgcttggc 546
| |||||||||
Sbjct: 683 aggcgtgcttggc 695
>gb|CV059370.1|CV059370 BNEL47d2 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL47d2 5' similar to putative
cytochrome B5, mRNA sequence
Length = 648
Score = 359 bits (181), Expect = 8e-098
Identities = 348/401 (86%), Gaps = 2/401 (0%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 467 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 408
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctggg-tcttgtcctgg-ttgta 291
|||||||||| ||||||||||||||||||| ||||||| ||| ||||||||||| |||||
Sbjct: 407 gggggaccaagaactggaggatcttgatgatgaactccgggggtcttgtcctgggttgta 348
Query: 292 gtgcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctc 351
||| ||||||||||| ||| ||||||| ||||||||||||||||||| || || |||||
Sbjct: 347 gtgtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctc 288
Query: 352 acccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaa 411
|| || |||||||||||||||| || || || || ||||||| |||||||| || ||
Sbjct: 287 gccgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaa 228
Query: 412 atcatcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatc 471
|||||||| || ||||||||||| ||||||||||| || || |||||||||||||| ||
Sbjct: 227 gtcatcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtc 168
Query: 472 ctccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtcctt 531
|| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||
Sbjct: 167 atcaaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtcctt 108
Query: 532 ggtgttgtgcttggccacctcctcgagggtgtacaccttgg 572
|| | ||||||||| ||||||||||||||| | |||||||
Sbjct: 107 ggaggcgtgcttggcgacctcctcgagggtgaagaccttgg 67
>gb|AV927668.1|AV927668 AV927668 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd3b18 3', mRNA sequence
Length = 661
Score = 357 bits (180), Expect = 3e-097
Identities = 315/360 (87%)
Strand = Plus / Plus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 285 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 344
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 345 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 404
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 405 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 464
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 465 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 524
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
||||||| || ||||||||||| ||||||||||| || || |||||||||||||| || |
Sbjct: 525 catcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcat 584
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 585 caaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttgg 644
>gb|AV931398.1|AV931398 AV931398 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd19k09 3', mRNA sequence
Length = 597
Score = 357 bits (180), Expect = 3e-097
Identities = 315/360 (87%)
Strand = Plus / Plus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 227 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 286
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 287 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 346
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 347 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 406
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 407 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 466
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
||||||| || ||||||||||| ||||||||||| || || |||||||||||||| || |
Sbjct: 467 catcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcat 526
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 527 caaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttgg 586
>gb|AJ460714.1|AJ460714 AJ460714 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200072G08F1, mRNA sequence
Length = 420
Score = 357 bits (180), Expect = 3e-097
Identities = 318/364 (87%)
Strand = Plus / Minus
Query: 209 gcgacggccagacccagtattgcgagggggaccaaaaactggaggatcttgatgacgaac 268
||||||||||| |||||||| || ||||||||||| ||||||||||||||||||| ||||
Sbjct: 420 gcgacggccaggcccagtatcgccagggggaccaagaactggaggatcttgatgatgaac 361
Query: 269 tcctgggtcttgtcctggttgtagtgcggctgcttggggggcgtgtacttcaccttggtg 328
||| |||||||||||||||||||||| ||||||||||| ||| ||||||| |||||||||
Sbjct: 360 tccggggtcttgtcctggttgtagtgtggctgcttgggcggcatgtacttgaccttggtg 301
Query: 329 ggtatcgtggctgcatcaatctcacccactaagtactcgtccatcattgcacgggcagtg 388
|||||||||| || || ||||| || || |||||||||||||||| || || || ||
Sbjct: 300 ggtatcgtggtcgcgtcgatctcgccgacatagtactcgtccatcatcgcccgagcggtc 241
Query: 389 ctgctgtgccccacatcttcgaaatcatcggtagcatccttggcagtggaagacagcaga 448
||||||| |||||||| || || |||||||| || ||||||||||| |||||||||||
Sbjct: 240 gtgctgtgtcccacatcctcaaagtcatcggtcgcgtccttggcagttgaagacagcagg 181
Query: 449 acatcatcgcctccagggtgatcctccagaaacttggtcacattgtacaccttgccgccg 508
|| || |||||||||||||| || || || ||||||||||||||||||||||||||| ||
Sbjct: 180 acgtcgtcgcctccagggtggtcatcaaggaacttggtcacattgtacaccttgccggcg 121
Query: 509 atgacgagccagcagtcgtccttggtgttgtgcttggccacctcctcgagggtgtacacc 568
||||| ||||||||||||||||||| | ||||||||| ||||||||||||||| | |||
Sbjct: 120 atgactagccagcagtcgtccttggaggcgtgcttggcgacctcctcgagggtgaagacc 61
Query: 569 ttgg 572
||||
Sbjct: 60 ttgg 57
>gb|BQ760981.1|BQ760981 EBro03_SQ004_A10_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ004_A10 5', mRNA sequence
Length = 586
Score = 357 bits (180), Expect = 3e-097
Identities = 315/360 (87%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 495 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 436
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 435 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 376
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 375 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 316
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 315 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 256
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
||||||| || ||||||||||| ||||||||||| || || |||||||||||||| || |
Sbjct: 255 catcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcat 196
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 195 caaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttgg 136
>gb|BJ548123.1|BJ548123 BJ548123 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal19f19 3', mRNA sequence
Length = 627
Score = 357 bits (180), Expect = 3e-097
Identities = 315/360 (87%)
Strand = Plus / Plus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 252 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 311
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 312 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 371
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 372 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 431
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 432 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 491
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
||||||| || ||||||||||| ||||||||||| || || |||||||||||||| || |
Sbjct: 492 catcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcat 551
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 552 caaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttgg 611
>gb|CK125633.1|CK125633 BES1824109e17 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010E179 5-PRIME, mRNA sequence
Length = 607
Score = 357 bits (180), Expect = 3e-097
Identities = 315/360 (87%)
Strand = Plus / Plus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 217 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 276
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 277 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 336
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 337 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 396
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 397 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 456
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
||||||| || ||||||||||| ||||||||||| || || |||||||||||||| || |
Sbjct: 457 catcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcat 516
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 517 caaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttgg 576
>gb|CA024759.1|CA024759 HZ50D15r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ50D15
5-PRIME, mRNA sequence
Length = 506
Score = 351 bits (177), Expect = 2e-095
Identities = 338/393 (86%)
Strand = Plus / Minus
Query: 180 cagattccgacttggtgtacatccttacagcgacggccagacccagtattgcgaggggga 239
|||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |||||||
Sbjct: 506 cagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgccaggggga 447
Query: 240 ccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagtgcggct 299
|||| ||||||||||||||||||| ||||||| |||||||||||||||||||||| ||||
Sbjct: 446 ccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagtgtggct 387
Query: 300 gcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcacccacta 359
||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |||||
Sbjct: 386 gcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgcccacat 327
Query: 360 agtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaatcatcgg 419
|||| ||||||||||| || || || || || |||| ||||| || || |||||||
Sbjct: 326 agtaatcgtccatcatcgcccgagcggtcgtgttgtgtnnnacatcctcaaagtcatcgg 267
Query: 420 tagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcctccagaa 479
| || ||||||||||| ||||||||||| || || |||||||||||||| || || || |
Sbjct: 266 tcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcatcaagga 207
Query: 480 acttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttggtgttgt 539
||||||| |||||||||||||||||| ||||||| ||||||||||||||||||| | ||
Sbjct: 206 acttggtnacattgtacaccttgccggcgatgactagccagcagtcgtccttggaggcgt 147
Query: 540 gcttggccacctcctcgagggtgtacaccttgg 572
||||||| ||||||||||||||| | |||||||
Sbjct: 146 gcttggcgacctcctcgagggtgaagaccttgg 114
>gb|BM371687.2|BM371687 EBma08_SQ003_J16_R maternal, 28 DPA, no treatment, cv Optic, EBma08
Hordeum vulgare subsp. vulgare cDNA clone
EBma08_SQ003_J16 5', mRNA sequence
Length = 440
Score = 333 bits (168), Expect = 4e-090
Identities = 297/340 (87%)
Strand = Plus / Minus
Query: 233 agggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtag 292
||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||
Sbjct: 434 agggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtag 375
Query: 293 tgcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctca 352
|| ||||||||||| ||| ||||||| ||||||||||||||||||| || || |||||
Sbjct: 374 tgtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcg 315
Query: 353 cccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaa 412
|| || |||||||||||||||| || || || || ||||||| |||||||| || ||
Sbjct: 314 ccgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaag 255
Query: 413 tcatcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcc 472
|||||||| || ||||||||||| ||||||||||| || || |||||||||||||| ||
Sbjct: 254 tcatcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtca 195
Query: 473 tccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttg 532
|| || ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||
Sbjct: 194 tcaaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttg 135
Query: 533 gtgttgtgcttggccacctcctcgagggtgtacaccttgg 572
| | ||||||||| ||||||||||||||| | |||||||
Sbjct: 134 gaggcgtgcttggcgacctcctcgagggtgaagaccttgg 95
>gb|CA021839.1|CA021839 HZ41E12r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ41E12
5-PRIME, mRNA sequence
Length = 439
Score = 333 bits (168), Expect = 4e-090
Identities = 297/340 (87%)
Strand = Plus / Minus
Query: 233 agggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtag 292
||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||
Sbjct: 431 agggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtag 372
Query: 293 tgcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctca 352
|| ||||||||||| ||| ||||||| ||||||||||||||||||| || || |||||
Sbjct: 371 tgtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcg 312
Query: 353 cccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaa 412
|| || |||||||||||||||| || || || || ||||||| |||||||| || ||
Sbjct: 311 ccgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaag 252
Query: 413 tcatcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcc 472
|||||||| || ||||||||||| ||||||||||| || || |||||||||||||| ||
Sbjct: 251 tcatcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtca 192
Query: 473 tccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttg 532
|| || ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||
Sbjct: 191 tcaaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttg 132
Query: 533 gtgttgtgcttggccacctcctcgagggtgtacaccttgg 572
| | ||||||||| ||||||||||||||| | |||||||
Sbjct: 131 gaggcgtgcttggcgacctcctcgagggtgaagaccttgg 92
>gb|BM099994.2|BM099994 EBes01_SQ004_N18_R embryo sac, 4-6 DPA, no treatment, cv Optic,
EBes01 Hordeum vulgare subsp. vulgare cDNA clone
EBes01_SQ004_N18 5', mRNA sequence
Length = 453
Score = 325 bits (164), Expect = 1e-087
Identities = 306/352 (86%), Gaps = 1/352 (0%)
Strand = Plus / Minus
Query: 222 ccagtattgcgagggggaccaaaaactggaggatcttgatgacgaactcctggg-tcttg 280
||||||| || ||||||||||| ||||||||||||||||||| ||||||| ||| |||||
Sbjct: 453 ccagtatcgccagggggaccaagaactggaggatcttgatgatgaactccgggggtcttg 394
Query: 281 tcctggttgtagtgcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggct 340
|||||||||||||| ||||||||||| ||| ||||||| |||||||||||||||||||
Sbjct: 393 tcctggttgtagtgtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtc 334
Query: 341 gcatcaatctcacccactaagtactcgtccatcattgcacgggcagtgctgctgtgcccc 400
|| || ||||| || || |||||||||||||||| || || || || ||||||| |||
Sbjct: 333 gcgtcgatctcgccgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtccc 274
Query: 401 acatcttcgaaatcatcggtagcatccttggcagtggaagacagcagaacatcatcgcct 460
||||| || || |||||||| || ||||||||||| ||||||||||| || || ||||||
Sbjct: 273 acatcctcaaagtcatcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcct 214
Query: 461 ccagggtgatcctccagaaacttggtcacattgtacaccttgccgccgatgacgagccag 520
|||||||| || || || ||||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 213 ccagggtggtcatcaaggaacttggtcacattgtacaccttgccggcgatgactagccag 154
Query: 521 cagtcgtccttggtgttgtgcttggccacctcctcgagggtgtacaccttgg 572
||||||||||||| | ||||||||| ||||||||||||||| | |||||||
Sbjct: 153 cagtcgtccttggaggcgtgcttggcgacctcctcgagggtgaagaccttgg 102
>gb|BI955919.1|BI955919 HVSMEm0025B06f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0025B06f, mRNA sequence
Length = 681
Score = 323 bits (163), Expect = 4e-087
Identities = 339/395 (85%), Gaps = 2/395 (0%)
Strand = Plus / Minus
Query: 180 cagattccgacttgg-tgtacatccttacagcgacggccagacccagtattgcgaggggg 238
|||| |||||||||| |||| |||| ||| ||||||||||| |||||||| || ||||||
Sbjct: 498 cagactccgacttgggtgtagatccgtacggcgacggccaggcccagtatcgccaggggg 439
Query: 239 accaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagtgcggc 298
||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||| |||
Sbjct: 438 accaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagtgtggc 379
Query: 299 tgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcacccact 358
|||||||| ||| ||||||| ||||||||||||||||||| || || ||||| || ||
Sbjct: 378 tgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctccccgaca 319
Query: 359 aagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaatcatcg 418
|||||||||||||||| || || || || ||||||| |||||||| || || ||||||
Sbjct: 318 tagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagtcatcg 259
Query: 419 gtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcctccaga 478
|| || ||||||||||| ||||||||||| || || |||||||||||||| || || ||
Sbjct: 258 gtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcatcaagg 199
Query: 479 aacttggtcacattgtacacct-tgccgccgatgacgagccagcagtcgtccttggtgtt 537
|||||||||||||||||||||| || || |||| ||||||||||||||||||| |
Sbjct: 198 aacttggtcacattgtacacctcccccccccatgaatagccagcagtcgtccttggaggc 139
Query: 538 gtgcttggccacctcctcgagggtgtacaccttgg 572
||||||||| ||||||||||||||| | |||||||
Sbjct: 138 gtgcttggcgacctcctcgagggtgaagaccttgg 104
>gb|BJ548756.1|BJ548756 BJ548756 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal34p18 3', mRNA sequence
Length = 545
Score = 321 bits (162), Expect = 2e-086
Identities = 300/346 (86%)
Strand = Plus / Plus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 200 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 259
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 260 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 319
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 320 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 379
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 380 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 439
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
||||||| || ||||||||||| ||||||||||| || || |||||| ||||||| || |
Sbjct: 440 catcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgccttcagggtggtcat 499
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagcca 519
| || ||||||||||||||||||||||||||| ||||||| |||||
Sbjct: 500 caaggaacttggtcacattgtacaccttgccggcgatgactagcca 545
>gb|BQ467882.1|BQ467882 HR01D14r HR Hordeum vulgare subsp. vulgare cDNA clone HR01D14
5-PRIME, mRNA sequence
Length = 426
Score = 317 bits (160), Expect = 3e-085
Identities = 286/328 (87%)
Strand = Plus / Minus
Query: 245 aactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagtgcggctgcttg 304
||||||||||||||||||| ||||||| |||||||||||||||||||||| |||||||||
Sbjct: 426 aactggaggatcttgatgatgaactccggggtcttgtcctggttgtagtgtggctgcttg 367
Query: 305 gggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcacccactaagtac 364
|| ||| ||||||| ||||||||||||||||||| || || ||||| || || |||||
Sbjct: 366 ggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgccgacatagtac 307
Query: 365 tcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaatcatcggtagca 424
||||||||||| || || || || ||||||| |||||||| || || |||||||| ||
Sbjct: 306 tcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagtcatcggtcgcg 247
Query: 425 tccttggcagtggaagacagcagaacatcatcgcctccagggtgatcctccagaaacttg 484
||||||||||| ||||||||||| || || |||||||||||||| || || || ||||||
Sbjct: 246 tccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcatcaaggaacttg 187
Query: 485 gtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttggtgttgtgcttg 544
||||||||||||||||||||| ||||||| ||||||||||||||||||| | |||||||
Sbjct: 186 gtcacattgtacaccttgccggcgatgactagccagcagtcgtccttggaggcgtgcttg 127
Query: 545 gccacctcctcgagggtgtacaccttgg 572
|| ||||||||||||||| | |||||||
Sbjct: 126 gcgacctcctcgagggtgaagaccttgg 99
>gb|AJ463321.1|AJ463321 AJ463321 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200084E03F1, mRNA sequence
Length = 420
Score = 309 bits (156), Expect = 6e-083
Identities = 285/328 (86%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 328 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 269
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 268 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 209
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 208 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 149
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 148 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 89
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
||||||| || ||||||||||| ||||||||||| || || |||||||||||||| || |
Sbjct: 88 catcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcat 29
Query: 474 ccagaaacttggtcacattgtacacctt 501
| || |||||||||||||||||||||||
Sbjct: 28 caaggaacttggtcacattgtacacctt 1
>gb|AJ432555.1|AJ432555 AJ432555 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200086E09F1, mRNA sequence
Length = 462
Score = 305 bits (154), Expect = 1e-081
Identities = 283/326 (86%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 330 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 271
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 270 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 211
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 210 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 151
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 150 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 91
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
||||||| || ||||||||||| ||||||||||| || || |||||||||||||| || |
Sbjct: 90 catcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcat 31
Query: 474 ccagaaacttggtcacattgtacacc 499
| || |||||||||||||||||||||
Sbjct: 30 caaggaacttggtcacattgtacacc 5
>gb|BJ547431.1|BJ547431 BJ547431 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal19f19 5', mRNA sequence
Length = 437
Score = 299 bits (151), Expect = 6e-080
Identities = 279/322 (86%)
Strand = Plus / Minus
Query: 251 aggatcttgatgacgaactcctgggtcttgtcctggttgtagtgcggctgcttggggggc 310
||||||||||||| ||||||| |||||||||||||||||||||| |||||||||| |||
Sbjct: 437 aggatcttgatgatgaactccggggtcttgtcctggttgtagtgtggctgcttggncggc 378
Query: 311 gtgtacttcaccttggtgggtatcgtggctgcatcaatctcacccactaagtactcgtcc 370
||||||| ||||||||||||||||||| || || ||||| || || |||||||||||
Sbjct: 377 atgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgccgacatagtactcgtcc 318
Query: 371 atcattgcacgggcagtgctgctgtgccccacatcttcgaaatcatcggtagcatccttg 430
||||| || || || || ||||||| |||||||| || || |||||||| || ||||||
Sbjct: 317 atcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagtcatcggtcgcgtccttg 258
Query: 431 gcagtggaagacagcagaacatcatcgcctccagggtgatcctccagaaacttggtcaca 490
||||| ||||||||||| || || |||||||||||||| || || || ||||||||||||
Sbjct: 257 gcagttgaagacagcaggacgtcgtcgcctccagggtggtcatcaaggaacttggtcaca 198
Query: 491 ttgtacaccttgccgccgatgacgagccagcagtcgtccttggtgttgtgcttggccacc 550
||||||||||||||| ||||||| ||||||||||||||||||| | ||||||||| |||
Sbjct: 197 ttgtacaccttgccggcgatgactagccagcagtcgtccttggaggcgtgcttggcgacc 138
Query: 551 tcctcgagggtgtacaccttgg 572
|||||||||||| | |||||||
Sbjct: 137 tcctcgagggtgaagaccttgg 116
>gb|AL509219.1|AL509219 AL509219 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY01B09u 3',
mRNA sequence
Length = 697
Score = 295 bits (149), Expect = 1e-078
Identities = 314/364 (86%), Gaps = 4/364 (1%)
Strand = Plus / Plus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 229 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 288
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 289 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 348
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 349 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 408
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 409 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 468
Query: 414 catcggtagcatccttggcagtggaagacagcagaacat-catcgcctccagggtgatcc 472
||||||| || ||||||||||| ||||||||||| || | | |||||||||||||| ||
Sbjct: 469 catcggtcgcgtccttggcagttgaagacagcaggacgtccgtcgcctccagggtggtca 528
Query: 473 tccagaaacttggtcacattgtaca-ccttg-ccgccgatgacgag-ccagcagtcgtcc 529
|| || ||||||||||||||||||| ||||| ||| ||||||| || ||| |||||||||
Sbjct: 529 tcaaggaacttggtcacattgtacacccttgcccggcgatgactagcccancagtcgtcc 588
Query: 530 ttgg 533
||||
Sbjct: 589 ttgg 592
>gb|BI952661.1|BI952661 HVSMEm0007E22f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0007E22f, mRNA sequence
Length = 421
Score = 289 bits (146), Expect = 6e-077
Identities = 272/314 (86%)
Strand = Plus / Minus
Query: 259 gatgacgaactcctgggtcttgtcctggttgtagtgcggctgcttggggggcgtgtactt 318
||||| ||||||| |||||||||||||||||||||| ||||||||||| ||| |||||||
Sbjct: 421 gatgatgaactccggggtcttgtcctggttgtagtgtggctgcttgggcggcatgtactt 362
Query: 319 caccttggtgggtatcgtggctgcatcaatctcacccactaagtactcgtccatcattgc 378
||||||||||||||||||| || || ||||| || || |||||||||||||||| ||
Sbjct: 361 gaccttggtgggtatcgtggtcgcgtcgatctcgccgacatagtactcgtccatcatcgc 302
Query: 379 acgggcagtgctgctgtgccccacatcttcgaaatcatcggtagcatccttggcagtgga 438
|| || || ||||||| |||||||| || || |||||||| || ||||||||||| ||
Sbjct: 301 ccgagcggtcgtgctgtgtcccacatcctcaaagtcatcggtcgcgtccttggcagttga 242
Query: 439 agacagcagaacatcatcgcctccagggtgatcctccagaaacttggtcacattgtacac 498
||||||||| || || |||||||||||||| || || || ||||||||||||||||||||
Sbjct: 241 agacagcaggacgtcgtcgcctccagggtggtcatcaaggaacttggtcacattgtacac 182
Query: 499 cttgccgccgatgacgagccagcagtcgtccttggtgttgtgcttggccacctcctcgag 558
||||||| ||||||| ||||||||||||||||||| | ||||||||| |||||||||||
Sbjct: 181 cttgccggcgatgactagccagcagtcgtccttggaggcgtgcttggcgacctcctcgag 122
Query: 559 ggtgtacaccttgg 572
|||| | |||||||
Sbjct: 121 ggtgaagaccttgg 108
>gb|AJ460713.1|AJ460713 AJ460713 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200008A05F1, mRNA sequence
Length = 300
Score = 287 bits (145), Expect = 2e-076
Identities = 259/297 (87%)
Strand = Plus / Minus
Query: 209 gcgacggccagacccagtattgcgagggggaccaaaaactggaggatcttgatgacgaac 268
||||||||||| |||||||| || ||||||||||| ||||||||||||||||||| ||||
Sbjct: 299 gcgacggccaggcccagtatcgccagggggaccaagaactggaggatcttgatgatgaac 240
Query: 269 tcctgggtcttgtcctggttgtagtgcggctgcttggggggcgtgtacttcaccttggtg 328
||| |||||||||||||||||||||| ||||||||||| ||| ||||||| |||||||||
Sbjct: 239 tccggggtcttgtcctggttgtagtgtggctgcttgggcggcatgtacttgaccttggtg 180
Query: 329 ggtatcgtggctgcatcaatctcacccactaagtactcgtccatcattgcacgggcagtg 388
|||||||||| || || ||||| || || |||||||||||||||| || || || ||
Sbjct: 179 ggtatcgtggtcgcgtcgatctcgccgacatagtactcgtccatcatcgcccgagcggtc 120
Query: 389 ctgctgtgccccacatcttcgaaatcatcggtagcatccttggcagtggaagacagcaga 448
||||||| |||||||| || || |||||||| || ||||||||||| |||||||||||
Sbjct: 119 gtgctgtgtcccacatcctcaaagtcatcggtcgcgtccttggcagttgaagacagcagg 60
Query: 449 acatcatcgcctccagggtgatcctccagaaacttggtcacattgtacaccttgccg 505
|| || |||||||||||||| || || || |||||||||||||||||||||||||||
Sbjct: 59 acgtcgtcgcctccagggtggtcatcaaggaacttggtcacattgtacaccttgccg 3
>gb|BF254440.3|BF254440 HVSMEf0004A11f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0004A11f, mRNA sequence
Length = 916
Score = 276 bits (139), Expect = 9e-073
Identities = 256/295 (86%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 299 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 240
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 239 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 180
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 179 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 120
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 119 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 60
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtg 468
||||||| || ||||||||||| ||||||||||| || || ||||||||||||||
Sbjct: 59 catcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtg 5
>gb|BM099107.2|BM099107 EBpi05_SQ002_P11_R pistil, 8 DPA, no treatment, cv Optic, EBpi05
Hordeum vulgare subsp. vulgare cDNA clone
EBpi05_SQ002_P11 5', mRNA sequence
Length = 483
Score = 276 bits (139), Expect = 9e-073
Identities = 256/295 (86%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 299 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 240
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 239 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 180
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 179 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 120
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 119 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 60
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtg 468
||||||| || ||||||||||| ||||||||||| || || ||||||||||||||
Sbjct: 59 catcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtg 5
>gb|BQ759139.1|BQ759139 EBma07_SQ003_M21_R maternal, 21 DPA, no treatment, cv Optic, EBma07
Hordeum vulgare subsp. vulgare cDNA clone
EBma07_SQ003_M21 5', mRNA sequence
Length = 411
Score = 254 bits (128), Expect = 3e-066
Identities = 263/308 (85%)
Strand = Plus / Minus
Query: 265 gaactcctgggtcttgtcctggttgtagtgcggctgcttggggggcgtgtacttcacctt 324
||||||| |||||||||||||||||||||| || ||||||| ||| ||||||| |||||
Sbjct: 409 gaactccggggtcttgtcctggttgtagtgtggatgcttggacggcatgtacttgacctt 350
Query: 325 ggtgggtatcgtggctgcatcaatctcacccactaagtactcgtccatcattgcacgggc 384
|||||||||||||| || || ||||| || || |||||||||||||||| || || ||
Sbjct: 349 ggtgggtatcgtggtcgcgtcgatctcgccgacatagtactcgtccatcatcgcccgagc 290
Query: 385 agtgctgctgtgccccacatcttcgaaatcatcggtagcatccttggcagtggaagacag 444
|| ||||||| |||||||| || || |||||||| || ||||||||||| ||||||||
Sbjct: 289 ggtcgtgctgtgtcccacatcctcaaagtcatcggtcgcgtccttggcagttgaagacag 230
Query: 445 cagaacatcatcgcctccagggtgatcctccagaaacttggtcacattgtacaccttgcc 504
||| || || |||||||||||||| || || || ||||||||||||||||||||||||||
Sbjct: 229 caggacgtcgtcgcctccagggtggtcatcaaggaacttggtcacattgtacaccttgcc 170
Query: 505 gccgatgacgagccagcagtcgtccttggtgttgtgcttggccacctcctcgagggtgta 564
| |||||| ||||||||||||||||||| | ||||||||| ||||| ||||||||| |
Sbjct: 169 ggcgatgagtagccagcagtcgtccttggaggcgtgcttggcgacctcttcgagggtgaa 110
Query: 565 caccttgg 572
|||||||
Sbjct: 109 gaccttgg 102
>gb|AL511086.1|AL511086 AL511086 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY06P06u 3',
mRNA sequence
Length = 579
Score = 244 bits (123), Expect = 3e-063
Identities = 238/275 (86%), Gaps = 1/275 (0%)
Strand = Plus / Plus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 302 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 361
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 362 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 421
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 422 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 481
Query: 354 ccactaagtact-cgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaa 412
| || |||||| |||||||||| || || || || ||||||| |||||||| || ||
Sbjct: 482 cgacatagtactccgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaag 541
Query: 413 tcatcggtagcatccttggcagtggaagacagcag 447
|||||||| || ||||||||||| |||||||||||
Sbjct: 542 tcatcggtcgcgtccttggcagttgaagacagcag 576
>gb|CA029100.1|CA029100 HZ64D06r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ64D06
5-PRIME, mRNA sequence
Length = 386
Score = 242 bits (122), Expect = 1e-062
Identities = 242/282 (85%)
Strand = Plus / Minus
Query: 291 agtgcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatct 350
|||| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||
Sbjct: 386 agtgtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatct 327
Query: 351 cacccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcga 410
| || || |||||||||||||||| || || || || ||||||| |||||||| || |
Sbjct: 326 cgccgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaa 267
Query: 411 aatcatcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgat 470
| |||||||| || ||||||||||| ||||||||||| || || |||||||||||||| |
Sbjct: 266 agtcatcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggt 207
Query: 471 cctccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtcct 530
| || || ||||||||||||||||||||||||||| ||||||| ||||||||||||||||
Sbjct: 206 catcaaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtcct 147
Query: 531 tggtgttgtgcttggccacctcctcgagggtgtacaccttgg 572
||| | ||||||||| ||||||||||||||| | |||||||
Sbjct: 146 tggaggcgtgcttggcgacctcctcgagggtgaagaccttgg 105
>gb|CD663958.1|CD663958 UCRHV18_07ba02_b1 Drought-stressed Dicktoo barley epidermis cDNA
library Hordeum vulgare subsp. vulgare cDNA clone
UCRHV18_07ba02, mRNA sequence
Length = 668
Score = 238 bits (120), Expect = 2e-061
Identities = 321/388 (82%)
Strand = Plus / Plus
Query: 185 tccgacttggtgtacatccttacagcgacggccagacccagtattgcgagggggaccaaa 244
|||||||||||||| |||| || | ||||||||| |||||||| || ||||||||||
Sbjct: 249 tccgacttggtgtagatccggacggagacggccaggcccagtatcgccggggggaccaag 308
Query: 245 aactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagtgcggctgcttg 304
||||||||||||||||||| ||||||| ||| |||||||||| || | || |||||||||
Sbjct: 309 aactggaggatcttgatgatgaactccgggggcttgtcctggatgaactggggctgcttg 368
Query: 305 gggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcacccactaagtac 364
|| ||| ||||||| ||||||| |||||||| || | || ||||| || || |||||
Sbjct: 369 ggcggcatgtacttgaccttggggggtatcggggtcccgtcgatctcgccgacatagtac 428
Query: 365 tcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaatcatcggtagca 424
||||||||||| || || || || |||||| |||||||| || || |||||||| ||
Sbjct: 429 tcgtccatcatcgcccgagcggtcgggctgtgtcccacatcctcaaagtcatcggtcgcg 488
Query: 425 tccttggcagtggaagacagcagaacatcatcgcctccagggtgatcctccagaaacttg 484
||||||||||| ||||||||| | || ||||| ||||||||||| || || || ||||||
Sbjct: 489 tccttggcagttgaagacagcgggacgtcatctcctccagggtggtcatcaaggaacttg 548
Query: 485 gtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttggtgttgtgcttg 544
||||||||| || |||||||| ||||||| | ||||||| ||||||||| | | |||||
Sbjct: 549 gtcacattgcaccccttgccggcgatgactaaccagcagacgtccttggaggcgggcttg 608
Query: 545 gccacctcctcgagggtgtacaccttgg 572
|| |||||||| |||| | |||||||||
Sbjct: 609 gcgacctcctccagggagaacaccttgg 636
>gb|BJ547827.1|BJ547827 BJ547827 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal40d17 5', mRNA sequence
Length = 348
Score = 236 bits (119), Expect = 8e-061
Identities = 235/274 (85%)
Strand = Plus / Minus
Query: 299 tgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcacccact 358
|||||||| ||| ||||||| ||||||||||||||||||| || || ||||| || ||
Sbjct: 348 tgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgccgaca 289
Query: 359 aagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaatcatcg 418
|||||||||||||||| || || || || ||||||| |||||||| || || ||||||
Sbjct: 288 tagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagtcatcg 229
Query: 419 gtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcctccaga 478
|| || ||||||||||| ||||||||||| || || |||||||||||||| || || ||
Sbjct: 228 gtcgcgtccttggcagttgaagacagcagnacgtcgtcgcctccagggtggtcatcaagg 169
Query: 479 aacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttggtgttg 538
||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| | |
Sbjct: 168 aacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttggaggcg 109
Query: 539 tgcttggccacctcctcgagggtgtacaccttgg 572
|||||||| ||||||||||||||| | |||||||
Sbjct: 108 tgcttggcgacctcctcgagggtgaagaccttgg 75
>gb|AL507452.1|AL507452 AL507452 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY05L18V 5',
mRNA sequence
Length = 623
Score = 230 bits (116), Expect = 5e-059
Identities = 179/200 (89%)
Strand = Plus / Plus
Query: 363 actcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaatcatcggtag 422
|||| |||| ||| |||||||||||| |||||||||| ||||| || ||||||||||| |
Sbjct: 390 actcatccagcatcgcacgggcagtggtgctgtgcccgacatcctcaaaatcatcggttg 449
Query: 423 catccttggcagtggaagacagcagaacatcatcgcctccagggtgatcctccagaaact 482
| |||||| |||| || ||||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 450 cgtccttgccagtcgaggacagcagaacatcatcacctccagggtgatcctccaaaaact 509
Query: 483 tggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttggtgttgtgct 542
||||||||| ||| |||||||| |||||| |||||||||||||||||||||||||||||
Sbjct: 510 tggtcacatcgtataccttgccagcgatgatgagccagcagtcgtccttggtgttgtgct 569
Query: 543 tggccacctcctcgagggtg 562
||| ||||||||| ||||||
Sbjct: 570 tggacacctcctccagggtg 589
Score = 105 bits (53), Expect = 2e-021
Identities = 116/137 (84%)
Strand = Plus / Plus
Query: 182 gattccgacttggtgtacatccttacagcgacggccagacccagtattgcgagggggacc 241
||||||||||||||||||||||| | || || || || || ||||| || |||||||||
Sbjct: 209 gattccgacttggtgtacatcctaatggctacagctaggccaagtatggccagggggacc 268
Query: 242 aaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagtgcggctgc 301
| ||||||||||||||||||| |||||| |||||||||| ||||||||||| || |||
Sbjct: 269 aggaactggaggatcttgatgatgaactcaggggtcttgtcttggttgtagtgtggttgc 328
Query: 302 ttggggggcgtgtactt 318
|| || || ||||||||
Sbjct: 329 ttcggcggagtgtactt 345
>gb|AL510698.1|AL510698 AL510698 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY05L18u 3',
mRNA sequence
Length = 678
Score = 230 bits (116), Expect = 5e-059
Identities = 179/200 (89%)
Strand = Plus / Minus
Query: 363 actcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaatcatcggtag 422
|||| |||| ||| |||||||||||| |||||||||| ||||| || ||||||||||| |
Sbjct: 316 actcatccagcatcgcacgggcagtggtgctgtgcccgacatcctcaaaatcatcggttg 257
Query: 423 catccttggcagtggaagacagcagaacatcatcgcctccagggtgatcctccagaaact 482
| |||||| |||| || ||||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 256 cgtccttgccagtcgaggacagcagaacatcatcacctccagggtgatcctccaaaaact 197
Query: 483 tggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttggtgttgtgct 542
||||||||| ||| |||||||| |||||| |||||||||||||||||||||||||||||
Sbjct: 196 tggtcacatcgtataccttgccagcgatgatgagccagcagtcgtccttggtgttgtgct 137
Query: 543 tggccacctcctcgagggtg 562
||| ||||||||| ||||||
Sbjct: 136 tggacacctcctccagggtg 117
Score = 85.7 bits (43), Expect = 2e-015
Identities = 115/138 (83%), Gaps = 1/138 (0%)
Strand = Plus / Minus
Query: 182 gattccgactt-ggtgtacatccttacagcgacggccagacccagtattgcgagggggac 240
||||||||||| |||||||||||| | || || || || || ||||| || ||||||||
Sbjct: 498 gattccgactttggtgtacatcctaatggctacagctaggccaagtatggccagggggac 439
Query: 241 caaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagtgcggctg 300
|| ||||||||||||||||||| ||||| |||||||||| ||||||||||| || ||
Sbjct: 438 caggaactggaggatcttgatgatgaactnaggggtcttgtcttggttgtagtgtggttg 379
Query: 301 cttggggggcgtgtactt 318
||| || || ||||||||
Sbjct: 378 cttcggcggagtgtactt 361
>gb|BF259922.3|BF259922 HVSMEf0020K02f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0020K02f, mRNA sequence
Length = 719
Score = 230 bits (116), Expect = 5e-059
Identities = 179/200 (89%)
Strand = Plus / Minus
Query: 363 actcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaatcatcggtag 422
|||| |||| ||| |||||||||||| |||||||||| ||||| || ||||||||||| |
Sbjct: 319 actcatccagcatcgcacgggcagtggtgctgtgcccgacatcctcaaaatcatcggttg 260
Query: 423 catccttggcagtggaagacagcagaacatcatcgcctccagggtgatcctccagaaact 482
| |||||| |||| || ||||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 259 cgtccttgccagtcgaggacagcagaacatcatcacctccagggtgatcctccaaaaact 200
Query: 483 tggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttggtgttgtgct 542
||||||||| ||| |||||||| |||||| |||||||||||||||||||||||||||||
Sbjct: 199 tggtcacatcgtataccttgccagcgatgatgagccagcagtcgtccttggtgttgtgct 140
Query: 543 tggccacctcctcgagggtg 562
||| ||||||||| ||||||
Sbjct: 139 tggacacctcctccagggtg 120
Score = 97.6 bits (49), Expect = 5e-019
Identities = 115/137 (83%)
Strand = Plus / Minus
Query: 182 gattccgacttggtgtacatccttacagcgacggccagacccagtattgcgagggggacc 241
||||||||||||||||||||||| | || || || || || ||||| || ||| |||||
Sbjct: 500 gattccgacttggtgtacatcctaatggctacagctaggccaagtatggccaggtggacc 441
Query: 242 aaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagtgcggctgc 301
| ||||||||||||||||||| |||||| |||||||||| ||||||||||| || |||
Sbjct: 440 aggaactggaggatcttgatgatgaactcaggggtcttgtcttggttgtagtgtggttgc 381
Query: 302 ttggggggcgtgtactt 318
|| || || ||||||||
Sbjct: 380 ttcggcggagtgtactt 364
>gb|AV913404.1|AV913404 AV913404 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags21p02 5', mRNA sequence
Length = 575
Score = 230 bits (116), Expect = 5e-059
Identities = 179/200 (89%)
Strand = Plus / Minus
Query: 363 actcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaatcatcggtag 422
|||| |||| ||| |||||||||||| |||||||||| ||||| || ||||||||||| |
Sbjct: 321 actcatccagcatcgcacgggcagtggtgctgtgcccgacatcctcaaaatcatcggttg 262
Query: 423 catccttggcagtggaagacagcagaacatcatcgcctccagggtgatcctccagaaact 482
| |||||| |||| || ||||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 261 cgtccttgccagtcgaggacagcagaacatcatcacctccagggtgatcctccaaaaact 202
Query: 483 tggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttggtgttgtgct 542
||||||||| ||| |||||||| |||||| |||||||||||||||||||||||||||||
Sbjct: 201 tggtcacatcgtataccttgccagcgatgatgagccagcagtcgtccttggtgttgtgct 142
Query: 543 tggccacctcctcgagggtg 562
||| ||||||||| ||||||
Sbjct: 141 tggacacctcctccagggtg 122
Score = 105 bits (53), Expect = 2e-021
Identities = 116/137 (84%)
Strand = Plus / Minus
Query: 182 gattccgacttggtgtacatccttacagcgacggccagacccagtattgcgagggggacc 241
||||||||||||||||||||||| | || || || || || ||||| || |||||||||
Sbjct: 502 gattccgacttggtgtacatcctaatggctacagctaggccaagtatggccagggggacc 443
Query: 242 aaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagtgcggctgc 301
| ||||||||||||||||||| |||||| |||||||||| ||||||||||| || |||
Sbjct: 442 aggaactggaggatcttgatgatgaactcaggggtcttgtcttggttgtagtgtggttgc 383
Query: 302 ttggggggcgtgtactt 318
|| || || ||||||||
Sbjct: 382 ttcggcggagtgtactt 366
>gb|AV918702.1|AV918702 AV918702 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags21p02 3', mRNA sequence
Length = 641
Score = 230 bits (116), Expect = 5e-059
Identities = 179/200 (89%)
Strand = Plus / Plus
Query: 363 actcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaatcatcggtag 422
|||| |||| ||| |||||||||||| |||||||||| ||||| || ||||||||||| |
Sbjct: 342 actcatccagcatcgcacgggcagtggtgctgtgcccgacatcctcaaaatcatcggttg 401
Query: 423 catccttggcagtggaagacagcagaacatcatcgcctccagggtgatcctccagaaact 482
| |||||| |||| || ||||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 402 cgtccttgccagtcgaggacagcagaacatcatcacctccagggtgatcctccaaaaact 461
Query: 483 tggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttggtgttgtgct 542
||||||||| ||| |||||||| |||||| |||||||||||||||||||||||||||||
Sbjct: 462 tggtcacatcgtataccttgccagcgatgatgagccagcagtcgtccttggtgttgtgct 521
Query: 543 tggccacctcctcgagggtg 562
||| ||||||||| ||||||
Sbjct: 522 tggacacctcctccagggtg 541
Score = 105 bits (53), Expect = 2e-021
Identities = 116/137 (84%)
Strand = Plus / Plus
Query: 182 gattccgacttggtgtacatccttacagcgacggccagacccagtattgcgagggggacc 241
||||||||||||||||||||||| | || || || || || ||||| || |||||||||
Sbjct: 160 gattccgacttggtgtacatcctaatggctacagctaggccaagtatggccagggggacc 219
Query: 242 aaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagtgcggctgc 301
| ||||||||||||||||||| |||||| |||||||||| ||||||||||| || |||
Sbjct: 220 aggaactggaggatcttgatgatgaactcaggggtcttgtcttggttgtagtgtggttgc 279
Query: 302 ttggggggcgtgtactt 318
|| || || ||||||||
Sbjct: 280 ttcggcggagtgtactt 296
>gb|AV922272.1|AV922272 AV922272 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags3g05 3', mRNA sequence
Length = 338
Score = 230 bits (116), Expect = 5e-059
Identities = 179/200 (89%)
Strand = Plus / Plus
Query: 363 actcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaatcatcggtag 422
|||| |||| ||| |||||||||||| |||||||||| ||||| || ||||||||||| |
Sbjct: 82 actcatccagcatcgcacgggcagtggtgctgtgcccgacatcctcaaaatcatcggttg 141
Query: 423 catccttggcagtggaagacagcagaacatcatcgcctccagggtgatcctccagaaact 482
| |||||| |||| || ||||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 142 cgtccttgccagtcgaggacagcagaacatcatcacctccagggtgatcctccaaaaact 201
Query: 483 tggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttggtgttgtgct 542
||||||||| ||| |||||||| |||||| |||||||||||||||||||||||||||||
Sbjct: 202 tggtcacatcgtataccttgccagcgatgatgagccagcagtcgtccttggtgttgtgct 261
Query: 543 tggccacctcctcgagggtg 562
||| ||||||||| ||||||
Sbjct: 262 tggacacctcctccagggtg 281
>gb|BQ463496.1|BQ463496 HI05H15r HI Hordeum vulgare subsp. vulgare cDNA clone HI05H15
5-PRIME, mRNA sequence
Length = 439
Score = 230 bits (116), Expect = 5e-059
Identities = 179/200 (89%)
Strand = Plus / Minus
Query: 363 actcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaatcatcggtag 422
|||| |||| ||| |||||||||||| |||||||||| ||||| || ||||||||||| |
Sbjct: 325 actcatccagcatcgcacgggcagtggtgctgtgcccgacatcctcaaaatcatcggttg 266
Query: 423 catccttggcagtggaagacagcagaacatcatcgcctccagggtgatcctccagaaact 482
| |||||| |||| || ||||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 265 cgtccttgccagtcgaggacagcagaacatcatcacctccagggtgatcctccaaaaact 206
Query: 483 tggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttggtgttgtgct 542
||||||||| ||| |||||||| |||||| |||||||||||||||||||||||||||||
Sbjct: 205 tggtcacatcgtataccttgccagcgatgatgagccagcagtcgtccttggtgttgtgct 146
Query: 543 tggccacctcctcgagggtg 562
||| ||||||||| ||||||
Sbjct: 145 tggacacctcctccagggtg 126
Score = 67.9 bits (34), Expect = 4e-010
Identities = 61/70 (87%)
Strand = Plus / Minus
Query: 249 ggaggatcttgatgacgaactcctgggtcttgtcctggttgtagtgcggctgcttggggg 308
||||||||||||||| |||||| |||||||||| ||||||||||| || ||||| || |
Sbjct: 439 ggaggatcttgatgatgaactcaggggtcttgtcttggttgtagtgtggttgcttcggcg 380
Query: 309 gcgtgtactt 318
| ||||||||
Sbjct: 379 gagtgtactt 370
>gb|BQ468105.1|BQ468105 HR01P09r HR Hordeum vulgare subsp. vulgare cDNA clone HR01P09
5-PRIME, mRNA sequence
Length = 477
Score = 230 bits (116), Expect = 5e-059
Identities = 179/200 (89%)
Strand = Plus / Minus
Query: 363 actcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaatcatcggtag 422
|||| |||| ||| |||||||||||| |||||||||| ||||| || ||||||||||| |
Sbjct: 348 actcatccagcatcgcacgggcagtggtgctgtgcccgacatcctcaaaatcatcggttg 289
Query: 423 catccttggcagtggaagacagcagaacatcatcgcctccagggtgatcctccagaaact 482
| |||||| |||| || ||||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 288 cgtccttgccagtcgaggacagcagaacatcatcacctccagggtgatcctccaaaaact 229
Query: 483 tggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttggtgttgtgct 542
||||||||| ||| |||||||| |||||| |||||||||||||||||||||||||||||
Sbjct: 228 tggtcacatcgtataccttgccagcgatgatgagccagcagtcgtccttggtgttgtgct 169
Query: 543 tggccacctcctcgagggtg 562
||| ||||||||| ||||||
Sbjct: 168 tggacacctcctccagggtg 149
Score = 81.8 bits (41), Expect = 3e-014
Identities = 74/85 (87%)
Strand = Plus / Minus
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
||||||||| ||||||||||||||||||| |||||| |||||||||| ||||||||||
Sbjct: 477 gggggaccaggaactggaggatcttgatgatgaactcaggggtcttgtcttggttgtagt 418
Query: 294 gcggctgcttggggggcgtgtactt 318
| || ||||| || || ||||||||
Sbjct: 417 gtggttgcttcggcggagtgtactt 393
>gb|BQ468455.1|BQ468455 HM01E23T HM Hordeum vulgare subsp. vulgare cDNA clone HM01E23
5-PRIME, mRNA sequence
Length = 632
Score = 230 bits (116), Expect = 5e-059
Identities = 179/200 (89%)
Strand = Plus / Minus
Query: 363 actcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaatcatcggtag 422
|||| |||| ||| |||||||||||| |||||||||| ||||| || ||||||||||| |
Sbjct: 428 actcatccagcatcgcacgggcagtggtgctgtgcccgacatcctcaaaatcatcggttg 369
Query: 423 catccttggcagtggaagacagcagaacatcatcgcctccagggtgatcctccagaaact 482
| |||||| |||| || ||||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 368 cgtccttgccagtcgaggacagcagaacatcatcacctccagggtgatcctccaaaaact 309
Query: 483 tggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttggtgttgtgct 542
||||||||| ||| |||||||| |||||| |||||||||||||||||||||||||||||
Sbjct: 308 tggtcacatcgtataccttgccagcgatgatgagccagcagtcgtccttggtgttgtgct 249
Query: 543 tggccacctcctcgagggtg 562
||| ||||||||| ||||||
Sbjct: 248 tggacacctcctccagggtg 229
Score = 105 bits (53), Expect = 2e-021
Identities = 116/137 (84%)
Strand = Plus / Minus
Query: 182 gattccgacttggtgtacatccttacagcgacggccagacccagtattgcgagggggacc 241
||||||||||||||||||||||| | || || || || || ||||| || |||||||||
Sbjct: 609 gattccgacttggtgtacatcctaatggctacagctaggccaagtatggccagggggacc 550
Query: 242 aaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagtgcggctgc 301
| ||||||||||||||||||| |||||| |||||||||| ||||||||||| || |||
Sbjct: 549 aggaactggaggatcttgatgatgaactcaggggtcttgtcttggttgtagtgtggttgc 490
Query: 302 ttggggggcgtgtactt 318
|| || || ||||||||
Sbjct: 489 ttcggcggagtgtactt 473
>gb|BQ660968.1|BQ660968 HM01E23w HM Hordeum vulgare subsp. vulgare cDNA clone HM01E23
3-PRIME, mRNA sequence
Length = 647
Score = 230 bits (116), Expect = 5e-059
Identities = 179/200 (89%)
Strand = Plus / Plus
Query: 363 actcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaatcatcggtag 422
|||| |||| ||| |||||||||||| |||||||||| ||||| || ||||||||||| |
Sbjct: 352 actcatccagcatcgcacgggcagtggtgctgtgcccgacatcctcaaaatcatcggttg 411
Query: 423 catccttggcagtggaagacagcagaacatcatcgcctccagggtgatcctccagaaact 482
| |||||| |||| || ||||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 412 cgtccttgccagtcgaggacagcagaacatcatcacctccagggtgatcctccaaaaact 471
Query: 483 tggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttggtgttgtgct 542
||||||||| ||| |||||||| |||||| |||||||||||||||||||||||||||||
Sbjct: 472 tggtcacatcgtataccttgccagcgatgatgagccagcagtcgtccttggtgttgtgct 531
Query: 543 tggccacctcctcgagggtg 562
||| ||||||||| ||||||
Sbjct: 532 tggacacctcctccagggtg 551
Score = 105 bits (53), Expect = 2e-021
Identities = 116/137 (84%)
Strand = Plus / Plus
Query: 182 gattccgacttggtgtacatccttacagcgacggccagacccagtattgcgagggggacc 241
||||||||||||||||||||||| | || || || || || ||||| || |||||||||
Sbjct: 171 gattccgacttggtgtacatcctaatggctacagctaggccaagtatggccagggggacc 230
Query: 242 aaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagtgcggctgc 301
| ||||||||||||||||||| |||||| |||||||||| ||||||||||| || |||
Sbjct: 231 aggaactggaggatcttgatgatgaactcaggggtcttgtcttggttgtagtgtggttgc 290
Query: 302 ttggggggcgtgtactt 318
|| || || ||||||||
Sbjct: 291 ttcggcggagtgtactt 307
>gb|BM443805.2|BM443805 EBem09_SQ001_J03_R embryo, 1 Day germination, no treatment, cv
Optic, EBem09 Hordeum vulgare subsp. vulgare cDNA clone
EBem09_SQ001_J03 5', mRNA sequence
Length = 619
Score = 230 bits (116), Expect = 5e-059
Identities = 179/200 (89%)
Strand = Plus / Minus
Query: 363 actcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaatcatcggtag 422
|||| |||| ||| |||||||||||| |||||||||| ||||| || ||||||||||| |
Sbjct: 420 actcatccagcatcgcacgggcagtggtgctgtgcccgacatcctcaaaatcatcggttg 361
Query: 423 catccttggcagtggaagacagcagaacatcatcgcctccagggtgatcctccagaaact 482
| |||||| |||| || ||||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 360 cgtccttgccagtcgaggacagcagaacatcatcacctccagggtgatcctccaaaaact 301
Query: 483 tggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttggtgttgtgct 542
||||||||| ||| |||||||| |||||| |||||||||||||||||||||||||||||
Sbjct: 300 tggtcacatcgtataccttgccagcgatgatgagccagcagtcgtccttggtgttgtgct 241
Query: 543 tggccacctcctcgagggtg 562
||| ||||||||| ||||||
Sbjct: 240 tggacacctcctccagggtg 221
Score = 107 bits (54), Expect = 5e-022
Identities = 116/137 (84%)
Strand = Plus / Minus
Query: 182 gattccgacttggtgtacatccttacagcgacggccagacccagtattgcgagggggacc 241
||||||||||||||||||||||| | || || || || || ||||| || |||||||||
Sbjct: 601 gattccgacttggtgtacatcctaatggctacagctaggccaagtatggccagggggacc 542
Query: 242 aaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagtgcggctgc 301
| ||||||||||||||||||| |||||| |||||||||| ||||||||||| || |||
Sbjct: 541 agnaactggaggatcttgatgatgaactcaggggtcttgtcttggttgtagtgtggttgc 482
Query: 302 ttggggggcgtgtactt 318
|| || || ||||||||
Sbjct: 481 ttcggcggagtgtactt 465
>gb|BI780994.2|BI780994 EBma03_SQ001_B15_R maternal, 8 DPA, no treatment, cv Optic, EBma03
Hordeum vulgare subsp. vulgare cDNA clone
EBma03_SQ001_B15 5', mRNA sequence
Length = 507
Score = 230 bits (116), Expect = 5e-059
Identities = 179/200 (89%)
Strand = Plus / Minus
Query: 363 actcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaatcatcggtag 422
|||| |||| ||| |||||||||||| |||||||||| ||||| || ||||||||||| |
Sbjct: 366 actcatccagcatcgcacgggcagtggtgctgtgcccgacatcctcaaaatcatcggttg 307
Query: 423 catccttggcagtggaagacagcagaacatcatcgcctccagggtgatcctccagaaact 482
| |||||| |||| || ||||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 306 cgtccttgccagtcgaggacagcagaacatcatcacctccagggtgatcctccaaaaact 247
Query: 483 tggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttggtgttgtgct 542
||||||||| ||| |||||||| |||||| |||||||||||||||||||||||||||||
Sbjct: 246 tggtcacatcgtataccttgccagcgatgatgagccagcagtcgtccttggtgttgtgct 187
Query: 543 tggccacctcctcgagggtg 562
||| ||||||||| ||||||
Sbjct: 186 tggacacctcctccagggtg 167
Score = 85.7 bits (43), Expect = 2e-015
Identities = 82/95 (86%)
Strand = Plus / Minus
Query: 224 agtattgcgagggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcc 283
||||| || |||||||||| ||||||||||||||||||| |||||| ||||||||||
Sbjct: 505 agtatggccagggggaccaggaactggaggatcttgatgatgaactcaggggtcttgtct 446
Query: 284 tggttgtagtgcggctgcttggggggcgtgtactt 318
||||||||||| || ||||| || || ||||||||
Sbjct: 445 tggttgtagtgtggttgcttcggcggagtgtactt 411
>gb|BQ758875.1|BQ758875 EBma07_SQ003_H01_R maternal, 21 DPA, no treatment, cv Optic, EBma07
Hordeum vulgare subsp. vulgare cDNA clone
EBma07_SQ003_H01 5', mRNA sequence
Length = 438
Score = 230 bits (116), Expect = 5e-059
Identities = 179/200 (89%)
Strand = Plus / Minus
Query: 363 actcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaatcatcggtag 422
|||| |||| ||| |||||||||||| |||||||||| ||||| || ||||||||||| |
Sbjct: 327 actcatccagcatcgcacgggcagtggtgctgtgcccgacatcctcaaaatcatcggttg 268
Query: 423 catccttggcagtggaagacagcagaacatcatcgcctccagggtgatcctccagaaact 482
| |||||| |||| || ||||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 267 cgtccttgccagtcgaggacagcagaacatcatcacctccagggtgatcctccaaaaact 208
Query: 483 tggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttggtgttgtgct 542
||||||||| ||| |||||||| |||||| |||||||||||||||||||||||||||||
Sbjct: 207 tggtcacatcgtataccttgccagcgatgatgagccagcagtcgtccttggtgttgtgct 148
Query: 543 tggccacctcctcgagggtg 562
||| ||||||||| ||||||
Sbjct: 147 tggacacctcctccagggtg 128
Score = 61.9 bits (31), Expect = 3e-008
Identities = 58/67 (86%)
Strand = Plus / Minus
Query: 252 ggatcttgatgacgaactcctgggtcttgtcctggttgtagtgcggctgcttggggggcg 311
|||||||||||| |||||| |||||||||| ||||||||||| || ||||| || || |
Sbjct: 438 ggatcttgatgatgaactcaggggtcttgtcttggttgtagtgtggttgcttcggcggag 379
Query: 312 tgtactt 318
|||||||
Sbjct: 378 tgtactt 372
>gb|BU974131.1|BU974131 HB26P19r BC Hordeum vulgare subsp. vulgare cDNA clone HB26P19
5-PRIME, mRNA sequence
Length = 526
Score = 230 bits (116), Expect = 5e-059
Identities = 179/200 (89%)
Strand = Plus / Minus
Query: 363 actcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaatcatcggtag 422
|||| |||| ||| |||||||||||| |||||||||| ||||| || ||||||||||| |
Sbjct: 322 actcatccagcatcgcacgggcagtggtgctgtgcccgacatcctcaaaatcatcggttg 263
Query: 423 catccttggcagtggaagacagcagaacatcatcgcctccagggtgatcctccagaaact 482
| |||||| |||| || ||||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 262 cgtccttgccagtcgaggacagcagaacatcatcacctccagggtgatcctccaaaaact 203
Query: 483 tggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttggtgttgtgct 542
||||||||| ||| |||||||| |||||| |||||||||||||||||||||||||||||
Sbjct: 202 tggtcacatcgtataccttgccagcgatgatgagccagcagtcgtccttggtgttgtgct 143
Query: 543 tggccacctcctcgagggtg 562
||| ||||||||| ||||||
Sbjct: 142 tggacacctcctccagggtg 123
Score = 105 bits (53), Expect = 2e-021
Identities = 116/137 (84%)
Strand = Plus / Minus
Query: 182 gattccgacttggtgtacatccttacagcgacggccagacccagtattgcgagggggacc 241
||||||||||||||||||||||| | || || || || || ||||| || |||||||||
Sbjct: 503 gattccgacttggtgtacatcctaatggctacagctaggccaagtatggccagggggacc 444
Query: 242 aaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagtgcggctgc 301
| ||||||||||||||||||| |||||| |||||||||| ||||||||||| || |||
Sbjct: 443 aggaactggaggatcttgatgatgaactcaggggtcttgtcttggttgtagtgtggttgc 384
Query: 302 ttggggggcgtgtactt 318
|| || || ||||||||
Sbjct: 383 ttcggcggagtgtactt 367
>gb|BU986032.1|BU986032 HF09G16r HF Hordeum vulgare subsp. vulgare cDNA clone HF09G16
5-PRIME, mRNA sequence
Length = 569
Score = 230 bits (116), Expect = 5e-059
Identities = 179/200 (89%)
Strand = Plus / Minus
Query: 363 actcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaatcatcggtag 422
|||| |||| ||| |||||||||||| |||||||||| ||||| || ||||||||||| |
Sbjct: 386 actcatccagcatcgcacgggcagtggtgctgtgcccgacatcctcaaaatcatcggttg 327
Query: 423 catccttggcagtggaagacagcagaacatcatcgcctccagggtgatcctccagaaact 482
| |||||| |||| || ||||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 326 cgtccttgccagtcgaggacagcagaacatcatcacctccagggtgatcctccaaaaact 267
Query: 483 tggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttggtgttgtgct 542
||||||||| ||| |||||||| |||||| |||||||||||||||||||||||||||||
Sbjct: 266 tggtcacatcgtataccttgccagcgatgatgagccagcagtcgtccttggtgttgtgct 207
Query: 543 tggccacctcctcgagggtg 562
||| ||||||||| ||||||
Sbjct: 206 tggacacctcctccagggtg 187
Score = 105 bits (53), Expect = 2e-021
Identities = 116/137 (84%)
Strand = Plus / Minus
Query: 182 gattccgacttggtgtacatccttacagcgacggccagacccagtattgcgagggggacc 241
||||||||||||||||||||||| | || || || || || ||||| || |||||||||
Sbjct: 567 gattccgacttggtgtacatcctaatggctacagctaggccaagtatggccagggggacc 508
Query: 242 aaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagtgcggctgc 301
| ||||||||||||||||||| |||||| |||||||||| ||||||||||| || |||
Sbjct: 507 aggaactggaggatcttgatgatgaactcaggggtcttgtcttggttgtagtgtggttgc 448
Query: 302 ttggggggcgtgtactt 318
|| || || ||||||||
Sbjct: 447 ttcggcggagtgtactt 431
>gb|BU988220.1|BU988220 HF17A08r HF Hordeum vulgare subsp. vulgare cDNA clone HF17A08
5-PRIME, mRNA sequence
Length = 455
Score = 230 bits (116), Expect = 5e-059
Identities = 179/200 (89%)
Strand = Plus / Minus
Query: 363 actcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaatcatcggtag 422
|||| |||| ||| |||||||||||| |||||||||| ||||| || ||||||||||| |
Sbjct: 430 actcatccagcatcgcacgggcagtggtgctgtgcccgacatcctcaaaatcatcggttg 371
Query: 423 catccttggcagtggaagacagcagaacatcatcgcctccagggtgatcctccagaaact 482
| |||||| |||| || ||||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 370 cgtccttgccagtcgaggacagcagaacatcatcacctccagggtgatcctccaaaaact 311
Query: 483 tggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttggtgttgtgct 542
||||||||| ||| |||||||| |||||| |||||||||||||||||||||||||||||
Sbjct: 310 tggtcacatcgtataccttgccagcgatgatgagccagcagtcgtccttggtgttgtgct 251
Query: 543 tggccacctcctcgagggtg 562
||| ||||||||| ||||||
Sbjct: 250 tggacacctcctccagggtg 231
>gb|BU994543.1|BU994543 HM07G13r HM Hordeum vulgare subsp. vulgare cDNA clone HM07G13
5-PRIME, mRNA sequence
Length = 547
Score = 230 bits (116), Expect = 5e-059
Identities = 179/200 (89%)
Strand = Plus / Minus
Query: 363 actcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaatcatcggtag 422
|||| |||| ||| |||||||||||| |||||||||| ||||| || ||||||||||| |
Sbjct: 343 actcatccagcatcgcacgggcagtggtgctgtgcccgacatcctcaaaatcatcggttg 284
Query: 423 catccttggcagtggaagacagcagaacatcatcgcctccagggtgatcctccagaaact 482
| |||||| |||| || ||||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 283 cgtccttgccagtcgaggacagcagaacatcatcacctccagggtgatcctccaaaaact 224
Query: 483 tggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttggtgttgtgct 542
||||||||| ||| |||||||| |||||| |||||||||||||||||||||||||||||
Sbjct: 223 tggtcacatcgtataccttgccagcgatgatgagccagcagtcgtccttggtgttgtgct 164
Query: 543 tggccacctcctcgagggtg 562
||| ||||||||| ||||||
Sbjct: 163 tggacacctcctccagggtg 144
Score = 105 bits (53), Expect = 2e-021
Identities = 116/137 (84%)
Strand = Plus / Minus
Query: 182 gattccgacttggtgtacatccttacagcgacggccagacccagtattgcgagggggacc 241
||||||||||||||||||||||| | || || || || || ||||| || |||||||||
Sbjct: 524 gattccgacttggtgtacatcctaatggctacagctaggccaagtatggccagggggacc 465
Query: 242 aaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagtgcggctgc 301
| ||||||||||||||||||| |||||| |||||||||| ||||||||||| || |||
Sbjct: 464 aggaactggaggatcttgatgatgaactcaggggtcttgtcttggttgtagtgtggttgc 405
Query: 302 ttggggggcgtgtactt 318
|| || || ||||||||
Sbjct: 404 ttcggcggagtgtactt 388
>gb|CA020096.1|CA020096 HV14F07r HV Hordeum vulgare subsp. vulgare cDNA clone HV14F07
5-PRIME, mRNA sequence
Length = 566
Score = 230 bits (116), Expect = 5e-059
Identities = 179/200 (89%)
Strand = Plus / Minus
Query: 363 actcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaatcatcggtag 422
|||| |||| ||| |||||||||||| |||||||||| ||||| || ||||||||||| |
Sbjct: 428 actcatccagcatcgcacgggcagtggtgctgtgcccgacatcctcaaaatcatcggttg 369
Query: 423 catccttggcagtggaagacagcagaacatcatcgcctccagggtgatcctccagaaact 482
| |||||| |||| || ||||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 368 cgtccttgccagtcgaggacagcagaacatcatcacctccagggtgatcctccaaaaact 309
Query: 483 tggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttggtgttgtgct 542
||||||||| ||| |||||||| |||||| |||||||||||||||||||||||||||||
Sbjct: 308 tggtcacatcgtataccttgccagcgatgatgagccagcagtcgtccttggtgttgtgct 249
Query: 543 tggccacctcctcgagggtg 562
||| ||||||||| ||||||
Sbjct: 248 tggacacctcctccagggtg 229
Score = 83.8 bits (42), Expect = 7e-015
Identities = 75/86 (87%)
Strand = Plus / Minus
Query: 233 agggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtag 292
|||||||||| ||||||||||||||||||| |||||| |||||||||| |||||||||
Sbjct: 558 agggggaccaggaactggaggatcttgatgatgaactcaggggtcttgtcttggttgtag 499
Query: 293 tgcggctgcttggggggcgtgtactt 318
|| || ||||| || || ||||||||
Sbjct: 498 tgtggttgcttcggcggagtgtactt 473
>gb|CA022010.1|CA022010 HZ41O07r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ41O07
5-PRIME, mRNA sequence
Length = 444
Score = 230 bits (116), Expect = 5e-059
Identities = 179/200 (89%)
Strand = Plus / Minus
Query: 363 actcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaatcatcggtag 422
|||| |||| ||| |||||||||||| |||||||||| ||||| || ||||||||||| |
Sbjct: 430 actcatccagcatcgcacgggcagtggtgctgtgcccgacatcctcaaaatcatcggttg 371
Query: 423 catccttggcagtggaagacagcagaacatcatcgcctccagggtgatcctccagaaact 482
| |||||| |||| || ||||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 370 cgtccttgccagtcgaggacagcagaacatcatcacctccagggtgatcctccaaaaact 311
Query: 483 tggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttggtgttgtgct 542
||||||||| ||| |||||||| |||||| |||||||||||||||||||||||||||||
Sbjct: 310 tggtcacatcgtataccttgccagcgatgatgagccagcagtcgtccttggtgttgtgct 251
Query: 543 tggccacctcctcgagggtg 562
||| ||||||||| ||||||
Sbjct: 250 tggacacctcctccagggtg 231
>gb|CA024926.1|CA024926 HZ50L13r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ50L13
5-PRIME, mRNA sequence
Length = 520
Score = 230 bits (116), Expect = 5e-059
Identities = 179/200 (89%)
Strand = Plus / Minus
Query: 363 actcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaatcatcggtag 422
|||| |||| ||| |||||||||||| |||||||||| ||||| || ||||||||||| |
Sbjct: 422 actcatccagcatcgcacgggcagtggtgctgtgcccgacatcctcaaaatcatcggttg 363
Query: 423 catccttggcagtggaagacagcagaacatcatcgcctccagggtgatcctccagaaact 482
| |||||| |||| || ||||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 362 cgtccttgccagtcgaggacagcagaacatcatcacctccagggtgatcctccaaaaact 303
Query: 483 tggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttggtgttgtgct 542
||||||||| ||| |||||||| |||||| |||||||||||||||||||||||||||||
Sbjct: 302 tggtcacatcgtataccttgccagcgatgatgagccagcagtcgtccttggtgttgtgct 243
Query: 543 tggccacctcctcgagggtg 562
||| ||||||||| ||||||
Sbjct: 242 tggacacctcctccagggtg 223
Score = 44.1 bits (22), Expect = 0.006
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 273 gggtcttgtcctggttgtagtgcggctgcttggggggcgtgtactt 318
|||||||||| ||||||||||| || ||||| || || ||||||||
Sbjct: 512 gggtcttgtcttggttgtagtgtggttgcttcggcggagtgtactt 467
>gb|BG417344.2|BG417344 HVSMEk0017J15f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0017J15f, mRNA sequence
Length = 543
Score = 228 bits (115), Expect = 2e-058
Identities = 214/247 (86%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 251 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 192
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 191 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 132
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 131 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 72
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || |||||||||||||||| || || || || ||||||| |||||||| || || |
Sbjct: 71 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagt 12
Query: 414 catcggt 420
|||||||
Sbjct: 11 catcggt 5
>gb|CV054049.1|CV054049 BNEL106b7 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL106b7 5' similar to cytochrome
B5, mRNA sequence
Length = 733
Score = 224 bits (113), Expect = 3e-057
Identities = 178/200 (89%)
Strand = Plus / Minus
Query: 363 actcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaatcatcggtag 422
|||| |||| ||| |||||||||||| |||||||||| ||||| || |||||||||| |
Sbjct: 390 actcatccagcatcgcacgggcagtggtgctgtgcccgacatcctcanaatcatcggttg 331
Query: 423 catccttggcagtggaagacagcagaacatcatcgcctccagggtgatcctccagaaact 482
| |||||| |||| || ||||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 330 cgtccttgccagtcgaggacagcagaacatcatcacctccagggtgatcctccaaaaact 271
Query: 483 tggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttggtgttgtgct 542
||||||||| ||| |||||||| |||||| |||||||||||||||||||||||||||||
Sbjct: 270 tggtcacatcgtataccttgccagcgatgatgagccagcagtcgtccttggtgttgtgct 211
Query: 543 tggccacctcctcgagggtg 562
||| ||||||||| ||||||
Sbjct: 210 tggacacctcctccagggtg 191
Score = 97.6 bits (49), Expect = 5e-019
Identities = 115/137 (83%)
Strand = Plus / Minus
Query: 182 gattccgacttggtgtacatccttacagcgacggccagacccagtattgcgagggggacc 241
|||||||||||||||||| |||| | || || || || || ||||| || |||||||||
Sbjct: 571 gattccgacttggtgtacgtcctaatggctacagctaggccaagtatggccagggggacc 512
Query: 242 aaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagtgcggctgc 301
| ||||||||||||||||||| |||||| |||||||||| ||||||||||| || |||
Sbjct: 511 aggaactggaggatcttgatgatgaactcaggggtcttgtcttggttgtagtgtggttgc 452
Query: 302 ttggggggcgtgtactt 318
|| || || ||||||||
Sbjct: 451 ttcggcggagtgtactt 435
>gb|BF257081.2|BF257081 HVSMEf0011M21f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0011M21f, mRNA sequence
Length = 584
Score = 222 bits (112), Expect = 1e-056
Identities = 172/192 (89%)
Strand = Plus / Minus
Query: 363 actcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaatcatcggtag 422
|||| |||| ||| |||||||||||| |||||||||| ||||| || ||||||||||| |
Sbjct: 404 actcatccagcatcgcacgggcagtggtgctgtgcccgacatcctcaaaatcatcggttg 345
Query: 423 catccttggcagtggaagacagcagaacatcatcgcctccagggtgatcctccagaaact 482
| |||||| |||| || ||||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 344 cgtccttgccagtcgaggacagcagaacatcatcacctccagggtgatcctccaaaaact 285
Query: 483 tggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttggtgttgtgct 542
||||||||| ||| |||||||| |||||| |||||||||||||||||||||||||||||
Sbjct: 284 tggtcacatcgtataccttgccagcgatgatgagccagcagtcgtccttggtgttgtgct 225
Query: 543 tggccacctcct 554
||| ||||||||
Sbjct: 224 tggacacctcct 213
Score = 44.1 bits (22), Expect = 0.006
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 245 aactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagtgcggctgcttg 304
||||||||||||||||||| ||| || ||||| |||| |||||| || | || |||||
Sbjct: 521 aactggaggatcttgatgatgaattcaggggtcctgtcttggttggagagtggttgcttc 462
Query: 305 gggggcgtgtactt 318
|| || ||||||||
Sbjct: 461 ggcggagtgtactt 448
>gb|BJ545043.1|BJ545043 BJ545043 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak42n04 5', mRNA sequence
Length = 539
Score = 222 bits (112), Expect = 1e-056
Identities = 202/232 (87%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 255 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 196
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 195 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 136
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 135 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 76
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatc 405
| || |||||||||||||||| || || || || ||||||| ||||||||
Sbjct: 75 cgacatagtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatc 24
>gb|CB880072.1|CB880072 HM05G13w HM Hordeum vulgare subsp. vulgare cDNA clone HM05G13
3-PRIME, mRNA sequence
Length = 556
Score = 222 bits (112), Expect = 1e-056
Identities = 172/192 (89%)
Strand = Plus / Plus
Query: 363 actcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaatcatcggtag 422
|||| |||| ||| |||||||||||| |||||||||| ||||| || ||||||||||| |
Sbjct: 365 actcatccagcatcgcacgggcagtggtgctgtgcccgacatcctcaaaatcatcggttg 424
Query: 423 catccttggcagtggaagacagcagaacatcatcgcctccagggtgatcctccagaaact 482
| |||||| |||| || ||||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 425 cgtccttgccagtcgaggacagcagaacatcatcacctccagggtgatcctccaaaaact 484
Query: 483 tggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttggtgttgtgct 542
||||||||| ||| |||||||| |||||| |||||||||||||||||||||||||||||
Sbjct: 485 tggtcacatcgtataccttgccagcgatgatgagccagcagtcgtccttggtgttgtgct 544
Query: 543 tggccacctcct 554
||| ||||||||
Sbjct: 545 tggacacctcct 556
Score = 105 bits (53), Expect = 2e-021
Identities = 116/137 (84%)
Strand = Plus / Plus
Query: 182 gattccgacttggtgtacatccttacagcgacggccagacccagtattgcgagggggacc 241
||||||||||||||||||||||| | || || || || || ||||| || |||||||||
Sbjct: 184 gattccgacttggtgtacatcctaatggctacagctaggccaagtatggccagggggacc 243
Query: 242 aaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagtgcggctgc 301
| ||||||||||||||||||| |||||| |||||||||| ||||||||||| || |||
Sbjct: 244 aggaactggaggatcttgatgatgaactcaggggtcttgtcttggttgtagtgtggttgc 303
Query: 302 ttggggggcgtgtactt 318
|| || || ||||||||
Sbjct: 304 ttcggcggagtgtactt 320
>gb|BM444258.1|BM444258 EBem09_SQ004_K01_R embryo, 1 Day germination, no treatment, cv
Optic, EBem09 Hordeum vulgare subsp. vulgare cDNA clone
EBem09_SQ004_K01 5', mRNA sequence
Length = 428
Score = 218 bits (110), Expect = 2e-055
Identities = 179/202 (88%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 207 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 148
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 147 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 88
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| ||||||||||| ||| ||||||| ||||||||||||||||||| || || ||||| |
Sbjct: 87 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtggtcgcgtcgatctcgc 28
Query: 354 ccactaagtactcgtccatcat 375
| || ||||||||||||||||
Sbjct: 27 cgacatagtactcgtccatcat 6
>gb|CB881287.1|CB881287 HM09F15w HM Hordeum vulgare subsp. vulgare cDNA clone HM09F15
3-PRIME, mRNA sequence
Length = 549
Score = 212 bits (107), Expect = 1e-053
Identities = 164/183 (89%)
Strand = Plus / Plus
Query: 363 actcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaatcatcggtag 422
|||| |||| ||| |||||||||||| |||||||||| ||||| || ||||||||||| |
Sbjct: 365 actcatccagcatcgcacgggcagtggtgctgtgcccgacatcctcaaaatcatcggttg 424
Query: 423 catccttggcagtggaagacagcagaacatcatcgcctccagggtgatcctccagaaact 482
| |||||| |||| || ||||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 425 cgtccttgccagtcgaggacagcagaacatcatcacctccagggtgatcctccaaaaact 484
Query: 483 tggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttggtgttgtgct 542
||||||||| ||| |||||||| |||||| |||||||||||||||||||||||||||||
Sbjct: 485 tggtcacatcgtataccttgccagcgatgatgagccagcagtcgtccttggtgttgtgct 544
Query: 543 tgg 545
|||
Sbjct: 545 tgg 547
Score = 105 bits (53), Expect = 2e-021
Identities = 116/137 (84%)
Strand = Plus / Plus
Query: 182 gattccgacttggtgtacatccttacagcgacggccagacccagtattgcgagggggacc 241
||||||||||||||||||||||| | || || || || || ||||| || |||||||||
Sbjct: 184 gattccgacttggtgtacatcctaatggctacagctaggccaagtatggccagggggacc 243
Query: 242 aaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagtgcggctgc 301
| ||||||||||||||||||| |||||| |||||||||| ||||||||||| || |||
Sbjct: 244 aggaactggaggatcttgatgatgaactcaggggtcttgtcttggttgtagtgtggttgc 303
Query: 302 ttggggggcgtgtactt 318
|| || || ||||||||
Sbjct: 304 ttcggcggagtgtactt 320
>gb|AL501899.1|AL501899 AL501899 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW05M08u 3', mRNA sequence
Length = 641
Score = 208 bits (105), Expect = 2e-052
Identities = 150/165 (90%)
Strand = Plus / Plus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 304 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 363
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 364 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 423
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtgg 338
| ||||||||||| ||| ||||||| |||||||||||||||||||
Sbjct: 424 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtgg 468
>gb|BQ759353.1|BQ759353 EBpi01_SQ004_C12_R pistil, 1 DPA, no treatment, cv Optic, EBpi01
Hordeum vulgare subsp. vulgare cDNA clone
EBpi01_SQ004_C12 5', mRNA sequence
Length = 420
Score = 208 bits (105), Expect = 2e-052
Identities = 150/165 (90%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 169 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 110
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 109 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 50
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtgg 338
| ||||||||||| ||| ||||||| |||||||||||||||||||
Sbjct: 49 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtgg 5
>gb|CA026719.1|CA026719 HZ56L21r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ56L21
5-PRIME, mRNA sequence
Length = 406
Score = 208 bits (105), Expect = 2e-052
Identities = 150/165 (90%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 190 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 131
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 130 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 71
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtgg 338
| ||||||||||| ||| ||||||| |||||||||||||||||||
Sbjct: 70 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtgg 26
>gb|BJ544400.1|BJ544400 BJ544400 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak27i13 5', mRNA sequence
Length = 461
Score = 208 bits (105), Expect = 2e-052
Identities = 150/165 (90%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 177 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 118
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 117 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 58
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtgg 338
| ||||||||||| ||| ||||||| |||||||||||||||||||
Sbjct: 57 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtgg 13
>gb|BJ546495.1|BJ546495 BJ546495 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak42c17 3', mRNA sequence
Length = 400
Score = 208 bits (105), Expect = 2e-052
Identities = 150/165 (90%)
Strand = Plus / Plus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 224 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 283
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 284 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 343
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtgg 338
| ||||||||||| ||| ||||||| |||||||||||||||||||
Sbjct: 344 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtgg 388
>gb|BJ548390.1|BJ548390 BJ548390 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal24b10 3', mRNA sequence
Length = 417
Score = 208 bits (105), Expect = 2e-052
Identities = 150/165 (90%)
Strand = Plus / Plus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 223 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 282
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 283 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 342
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtgg 338
| ||||||||||| ||| ||||||| |||||||||||||||||||
Sbjct: 343 gtggctgcttgggcggcatgtacttgaccttggtgggtatcgtgg 387
>gb|BG417705.1|BG417705 HVSMEk0019D04f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0019D04f, mRNA sequence
Length = 439
Score = 206 bits (104), Expect = 7e-052
Identities = 271/327 (82%)
Strand = Plus / Minus
Query: 236 gggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagtgc 295
|||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||||
Sbjct: 439 gggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagtgt 380
Query: 296 ggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcaccc 355
||||||||||| ||| ||||||| |||||||||||||| |||| || | ||||| |
Sbjct: 379 ggctgcttgggcggcatgtacttgaccttggtgggtatagtggtcgcgtagatctcgcgg 320
Query: 356 actaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaatca 415
|| |||||||||||||||| || || || || || |||| |||||||| || || |||
Sbjct: 319 acatagtactcgtccatcatcgcccgagcggtcgtgatgtgtcccacatcgtcaaagtca 260
Query: 416 tcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcctcc 475
||||| || || |||||||| ||||||||||| || || |||| ||||||||| || |
Sbjct: 259 tcggtcgcgtcattggcagttgaagacagcaggacgtcgtcgcttccagggtggtcataa 200
Query: 476 agaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttggtg 535
|| || ||||||||||||||||||| |||| |||||| || ||||||||||| ||| |
Sbjct: 199 aggaagttggtcacattgtacacctagccggcgatgagtagacagcagtcgtcgttgtag 140
Query: 536 ttgtgcttggccacctcctcgagggtg 562
||| ||||| ||||| |||||||||
Sbjct: 139 gagtgattggcgacctcntcgagggtg 113
>gb|BJ545013.1|BJ545013 BJ545013 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak42c17 5', mRNA sequence
Length = 460
Score = 202 bits (102), Expect = 1e-050
Identities = 147/162 (90%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 176 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 117
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 116 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 57
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcg 335
| ||||||||||| ||| ||||||| ||||||||||||||||
Sbjct: 56 gtggctgcttgggcggcatgtacttgaccttggtgggtatcg 15
>gb|BF258521.3|BF258521 HVSMEf0015P03f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0015P03f, mRNA sequence
Length = 594
Score = 200 bits (101), Expect = 4e-050
Identities = 171/193 (88%), Gaps = 1/193 (0%)
Strand = Plus / Minus
Query: 363 actcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaatcatcggtag 422
|||| |||| ||| || ||||||||| |||||||||| ||||| || ||||||||||| |
Sbjct: 207 actcatccagcatcgctcgggcagtggtgctgtgcccgacatcctcaaaatcatcggttg 148
Query: 423 catccttggcagtggaagacagcagaacatcatcgcctccagggtgatcctccagaaact 482
| |||||| |||| || ||||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 147 cgtccttgccagtcgaggacagcagaacatcatctcctccagggtgatcctccaaaaact 88
Query: 483 tggtcacattgtacaccttgccgccgatgacgagccagcagtcgt-ccttggtgttgtgc 541
||||||||| ||| |||||||| |||||| |||||||||||||| ||||||||||||||
Sbjct: 87 tggtcacatcgtataccttgccagcgatgatgagccagcagtcgtgccttggtgttgtgc 28
Query: 542 ttggccacctcct 554
|||| ||||||||
Sbjct: 27 ttggacacctcct 15
Score = 77.8 bits (39), Expect = 4e-013
Identities = 81/95 (85%)
Strand = Plus / Minus
Query: 224 agtattgcgagggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcc 283
||||| || |||||||||| ||||| ||||||||||||| |||||| ||||||||||
Sbjct: 346 agtatggccagggggaccaggaactgaaggatcttgatgatgaactcaggggtcttgtct 287
Query: 284 tggttgtagtgcggctgcttggggggcgtgtactt 318
||||||||||| || ||||| || || ||||||||
Sbjct: 286 tggttgtagtgtggttgcttcggcggagtgtactt 252
>gb|BQ662018.1|BQ662018 HR01D14u HR Hordeum vulgare subsp. vulgare cDNA clone HR01D14
3-PRIME, mRNA sequence
Length = 446
Score = 200 bits (101), Expect = 4e-050
Identities = 149/165 (90%)
Strand = Plus / Plus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 259 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 318
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 319 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 378
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtgg 338
| ||||||||||| ||| ||||||| ||||||| |||||||||||
Sbjct: 379 gtggctgcttgggcggcatgtacttgaccttggggggtatcgtgg 423
>gb|BJ548705.1|BJ548705 BJ548705 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal33h18 3', mRNA sequence
Length = 404
Score = 196 bits (99), Expect = 7e-049
Identities = 148/165 (89%)
Strand = Plus / Plus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 239 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 298
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 299 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 358
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtgg 338
| ||||| ||||| ||| ||||||| |||||||||| ||||||||
Sbjct: 359 gtggctgnttgggcggcatgtacttgaccttggtggntatcgtgg 403
>gb|AJ435184.1|AJ435184 AJ435184 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200087B08F1, mRNA sequence
Length = 532
Score = 194 bits (98), Expect = 3e-048
Identities = 150/166 (90%), Gaps = 1/166 (0%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 384 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 325
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 324 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 265
Query: 294 gcggctgcttggggggc-gtgtacttcaccttggtgggtatcgtgg 338
| ||||||||||| ||| ||||||| |||||||||||||||||||
Sbjct: 264 gtggctgcttgggcggcaatgtacttgaccttggtgggtatcgtgg 219
Score = 139 bits (70), Expect = 1e-031
Identities = 106/118 (89%)
Strand = Plus / Minus
Query: 413 tcatcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcc 472
|||||||| || ||||||||||| ||||||||||| || || |||||||||||||| ||
Sbjct: 137 tcatcggtcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtca 78
Query: 473 tccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtcct 530
|| || ||||||||||||||||||||||||||| ||||||| ||||||||||||||||
Sbjct: 77 tcaaggaacttggtcacattgtacaccttgccggcgatgactagccagcagtcgtcct 20
>gb|CA024745.1|CA024745 HZ50C23r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ50C23
5-PRIME, mRNA sequence
Length = 335
Score = 194 bits (98), Expect = 3e-048
Identities = 184/213 (86%)
Strand = Plus / Minus
Query: 360 agtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaatcatcgg 419
|||||||||||||||| || || || || ||||||| |||||||| || | |||||||
Sbjct: 316 agtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcanagtcatcgg 257
Query: 420 tagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcctccagaa 479
| || ||||||||||| ||||||||||| || || |||||||||||||| || || || |
Sbjct: 256 tcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcatcaagga 197
Query: 480 acttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttggtgttgt 539
|||||||||||||||||||||||||| ||||||| ||||||||||||||||||| | ||
Sbjct: 196 acttggtcacattgtacaccttgccggcgatgactagccagcagtcgtccttggaggcgt 137
Query: 540 gcttggccacctcctcgagggtgtacaccttgg 572
||||||| ||||||||||||||| | |||||||
Sbjct: 136 gcttggcgacctcctcgagggtgaagaccttgg 104
>gb|BQ756051.1|BQ756051 EBem05_SQ001_H09_R embryo, 14 DPA, no treatment, cv Optic, EBem05
Hordeum vulgare subsp. vulgare cDNA clone
EBem05_SQ001_H09 5', mRNA sequence
Length = 288
Score = 188 bits (95), Expect = 2e-046
Identities = 161/183 (87%)
Strand = Plus / Minus
Query: 390 tgctgtgccccacatcttcgaaatcatcggtagcatccttggcagtggaagacagcagaa 449
||||||| |||||||| || || |||||||| || ||||||||||| ||||||||||| |
Sbjct: 268 tgctgtgtcccacatcctcaaagtcatcggtcgcgtccttggcagttgaagacagcagga 209
Query: 450 catcatcgcctccagggtgatcctccagaaacttggtcacattgtacaccttgccgccga 509
| || |||||||||||||| || || || ||||||||||||||||||||||||||| |||
Sbjct: 208 cgtcgtcgcctccagggtggtcatcaaggaacttggtcacattgtacaccttgccggcga 149
Query: 510 tgacgagccagcagtcgtccttggtgttgtgcttggccacctcctcgagggtgtacacct 569
|||| ||||||||||||||||||| | ||||||||| ||||||||||||||| | ||||
Sbjct: 148 tgactagccagcagtcgtccttggaggcgtgcttggcgacctcctcgagggtgaagacct 89
Query: 570 tgg 572
|||
Sbjct: 88 tgg 86
>gb|BQ759037.1|BQ759037 EBma07_SQ003_G18_R maternal, 21 DPA, no treatment, cv Optic, EBma07
Hordeum vulgare subsp. vulgare cDNA clone
EBma07_SQ003_G18 5', mRNA sequence
Length = 321
Score = 188 bits (95), Expect = 2e-046
Identities = 176/203 (86%)
Strand = Plus / Minus
Query: 360 agtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaatcatcgg 419
|||||||||||||||| || || || || ||||||| |||||||| || || |||||||
Sbjct: 299 agtactcgtccatcatcgcccgagcggtcgtgctgtgtcccacatcctcaaagtcatcgg 240
Query: 420 tagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcctccagaa 479
| || ||||||||||| ||||||||||| || || |||||||||||||| || || || |
Sbjct: 239 tcgcgtccttggcagttgaagacagcaggacgtcgtcgcctccagggtggtcatcaagga 180
Query: 480 acttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttggtgttgt 539
|||||||||||||||||||||||||| ||||||| |||||||||||||| |||| | ||
Sbjct: 179 acttggtcacattgtacaccttgccggcgatgactagccagcagtcgtctttggaggcgt 120
Query: 540 gcttggccacctcctcgagggtg 562
||||||| |||||||||||||||
Sbjct: 119 gcttggcgacctcctcgagggtg 97
>gb|BQ658206.1|BQ658206 HA05F02u HA Hordeum vulgare subsp. vulgare cDNA clone HA05F02
3-PRIME, mRNA sequence
Length = 421
Score = 178 bits (90), Expect = 2e-043
Identities = 135/150 (90%)
Strand = Plus / Plus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 272 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 331
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 332 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 391
Query: 294 gcggctgcttggggggcgtgtacttcacct 323
| ||||||||||| ||| ||||||| ||||
Sbjct: 392 gtggctgcttgggcggcatgtacttgacct 421
>gb|BQ662109.1|BQ662109 HR01J17u HR Hordeum vulgare subsp. vulgare cDNA clone HR01J17
3-PRIME, mRNA sequence
Length = 402
Score = 178 bits (90), Expect = 2e-043
Identities = 135/150 (90%)
Strand = Plus / Plus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 253 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 312
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 313 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 372
Query: 294 gcggctgcttggggggcgtgtacttcacct 323
| ||||||||||| ||| ||||||| ||||
Sbjct: 373 gtggctgcttgggcggcatgtacttgacct 402
>gb|AL511497.1|AL511497 AL511497 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY08E05u 3',
mRNA sequence
Length = 503
Score = 174 bits (88), Expect = 2e-042
Identities = 149/167 (89%), Gaps = 2/167 (1%)
Strand = Plus / Plus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 280 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 339
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| |||||| |||||||||||||||||||||
Sbjct: 340 gggggaccaagaactggaggatcttgatgatnaactccggggtcttgtcctggttgtagt 399
Query: 294 g-cggctgcttggggggcgtgtacttcaccttggt-gggtatcgtgg 338
| ||||||||||| ||| ||||||| |||||||| |||||||||||
Sbjct: 400 gtgggctgcttgggcggcatgtacttgaccttggtggggtatcgtgg 446
>gb|BQ662191.1|BQ662191 HR01P09u HR Hordeum vulgare subsp. vulgare cDNA clone HR01P09
3-PRIME, mRNA sequence
Length = 571
Score = 172 bits (87), Expect = 1e-041
Identities = 144/163 (88%)
Strand = Plus / Plus
Query: 363 actcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaatcatcggtag 422
|||| |||| ||| |||||||||||| |||||||||| ||||| || ||||||||||| |
Sbjct: 409 actcatccagcatcgcacgggcagtggtgctgtgcccgacatcctcaaaatcatcggttg 468
Query: 423 catccttggcagtggaagacagcagaacatcatcgcctccagggtgatcctccagaaact 482
| |||||| |||| || ||||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 469 cgtccttgccagtcgaggacagcagaacatcatcacctccagggtgatcctccaaaaact 528
Query: 483 tggtcacattgtacaccttgccgccgatgacgagccagcagtc 525
||||||||| ||| |||||||| |||||| ||||||||||||
Sbjct: 529 tggtcacatcgtataccttgccagcgatgatgagccagcagtc 571
Score = 105 bits (53), Expect = 2e-021
Identities = 116/137 (84%)
Strand = Plus / Plus
Query: 182 gattccgacttggtgtacatccttacagcgacggccagacccagtattgcgagggggacc 241
||||||||||||||||||||||| | || || || || || ||||| || |||||||||
Sbjct: 228 gattccgacttggtgtacatcctaatggctacagctaggccaagtatggccagggggacc 287
Query: 242 aaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagtgcggctgc 301
| ||||||||||||||||||| |||||| |||||||||| ||||||||||| || |||
Sbjct: 288 aggaactggaggatcttgatgatgaactcaggggtcttgtcttggttgtagtgtggttgc 347
Query: 302 ttggggggcgtgtactt 318
|| || || ||||||||
Sbjct: 348 ttcggcggagtgtactt 364
>gb|AL499631.1|AL499631 AL499631 Hordeum vulgare Barke etiolated leaves Hordeum vulgare
subsp. vulgare cDNA clone HK01A04r 3', mRNA sequence
Length = 578
Score = 168 bits (85), Expect = 2e-040
Identities = 151/172 (87%), Gaps = 1/172 (0%)
Strand = Plus / Plus
Query: 363 actcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaatcatcggtag 422
|||| |||| ||| |||||||||||| |||||||||| ||||| || ||||||||||| |
Sbjct: 407 actcatccagcatcgcacgggcagtggtgctgtgcccgacatcctcaaaatcatcggttg 466
Query: 423 catccttggcagtggaagacagcagaacatcatcgcctccagggtgatcctccagaaact 482
| |||||| |||| || ||||||||||||||||| |||||| |||||||||||| |||||
Sbjct: 467 cgtccttgccagtcgaggacagcagaacatcatcacctccanggtgatcctccaaaaact 526
Query: 483 tggtcacattgtacaccttgccgccgatgacg-agccagcagtcgtccttgg 533
||||||||| ||| |||||||| |||||| | |||||||||||||||||||
Sbjct: 527 tggtcacatcgtataccttgccagcgatgatgaagccagcagtcgtccttgg 578
Score = 105 bits (53), Expect = 2e-021
Identities = 116/137 (84%)
Strand = Plus / Plus
Query: 182 gattccgacttggtgtacatccttacagcgacggccagacccagtattgcgagggggacc 241
||||||||||||||||||||||| | || || || || || ||||| || |||||||||
Sbjct: 226 gattccgacttggtgtacatcctaatggctacagctaggccaagtatggccagggggacc 285
Query: 242 aaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagtgcggctgc 301
| ||||||||||||||||||| |||||| |||||||||| ||||||||||| || |||
Sbjct: 286 aggaactggaggatcttgatgatgaactcaggggtcttgtcttggttgtagtgtggttgc 345
Query: 302 ttggggggcgtgtactt 318
|| || || ||||||||
Sbjct: 346 ttcggcggagtgtactt 362
>gb|BJ548496.1|BJ548496 BJ548496 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal26g21 3', mRNA sequence
Length = 400
Score = 155 bits (78), Expect = 2e-036
Identities = 114/126 (90%)
Strand = Plus / Plus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 222 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 281
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
|||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 282 gggggaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtagt 341
Query: 294 gcggct 299
| ||||
Sbjct: 342 gtggct 347
>gb|BF254507.2|BF254507 HVSMEf0004D12f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0004D12f, mRNA sequence
Length = 832
Score = 151 bits (76), Expect = 4e-035
Identities = 130/148 (87%)
Strand = Plus / Minus
Query: 425 tccttggcagtggaagacagcagaacatcatcgcctccagggtgatcctccagaaacttg 484
||||||||||| |||||||||| || || |||||||||||||| || || || ||||||
Sbjct: 235 tccttggcagtttaagacagcaggacgtcgtcgcctccagggtggtcatcaaggaacttg 176
Query: 485 gtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttggtgttgtgcttg 544
||||||||||||||||||||| |||||| ||||||||||||||||||| | |||||||
Sbjct: 175 gtcacattgtacaccttgccggtgatgactagccagcagtcgtccttggaggcgtgcttg 116
Query: 545 gccacctcctcgagggtgtacaccttgg 572
|| ||||||||||||||| | |||||||
Sbjct: 115 gcgacctcctcgagggtgaagaccttgg 88
>gb|BJ549152.1|BJ549152 BJ549152 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags24g21 5', mRNA sequence
Length = 199
Score = 145 bits (73), Expect = 2e-033
Identities = 155/182 (85%), Gaps = 1/182 (0%)
Strand = Plus / Minus
Query: 392 ctgtgccccacatcttcgaaatcatcggtagcatccttggcagtggaagacagcagaaca 451
||||| |||||||| || || |||||||| || |||||| |||| ||||||||||| ||
Sbjct: 198 ctgtgtcccacatcctcaaagtcatcggtcgcgtccttgncagttgaagacagcaggacg 139
Query: 452 tcatcgcctccagggtgatcctccagaaacttggtcacattgtacaccttgccgccgatg 511
|| | |||||||||||| || || || ||||||||||||||||||||||| ||| |||||
Sbjct: 138 tcgttgcctccagggtggtcatcaaggaacttggtcacattgtacaccttnccggcgatg 79
Query: 512 acgagccagcagtcgt-ccttggtgttgtgcttggccacctcctcgagggtgtacacctt 570
|| ||||||||||||| |||||| | ||||||||| |||||||||||||| | |||||
Sbjct: 78 actagccagcagtcgtaccttggaggcgtgcttggcgncctcctcgagggtgaagacctt 19
Query: 571 gg 572
||
Sbjct: 18 gg 17
>gb|CD662616.1|CD662616 UCRHV18_02cb12_b1 Drought-stressed Dicktoo barley epidermis cDNA
library Hordeum vulgare subsp. vulgare cDNA clone
UCRHV18_02cb12, mRNA sequence
Length = 472
Score = 141 bits (71), Expect = 3e-032
Identities = 98/107 (91%)
Strand = Plus / Plus
Query: 180 cagattccgacttggtgtacatccttacagcgacggccagacccagtattgcgaggggga 239
|||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |||||||
Sbjct: 358 cagactccgacttggtgtaaatccgtacggcgacggccaggcccagtatcgccaggggga 417
Query: 240 ccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctgg 286
|||||||||||||||||||||||| ||||||| ||||||||||||||
Sbjct: 418 ccaaaaactggaggatcttgatgatgaactccggggtcttgtcctgg 464
>gb|BF629804.2|BF629804 HVSMEb0013O09f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0013O09f, mRNA sequence
Length = 775
Score = 135 bits (68), Expect = 2e-030
Identities = 137/160 (85%)
Strand = Plus / Minus
Query: 413 tcatcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcc 472
|||||||| || ||||||||||| | || |||||| | || |||||||||||||| ||
Sbjct: 256 tcatcggtcgcgtccttggcagttgcagtcagcaggatgtcgtcgcctccagggtggtca 197
Query: 473 tccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttg 532
|| || ||||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 196 tcaaggaacttggtcacattgtacaccttgccggtgatgattagccagcagtcgtccttg 137
Query: 533 gtgttgtgcttggccacctcctcgagggtgtacaccttgg 572
| | ||||||||| ||||||||||||||| | |||||||
Sbjct: 136 gaggcgtgcttggcgacctcctcgagggtgaagaccttgg 97
>gb|BJ547255.1|BJ547255 BJ547255 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal26g21 5', mRNA sequence
Length = 197
Score = 129 bits (65), Expect = 1e-028
Identities = 101/113 (89%)
Strand = Plus / Minus
Query: 460 tccagggtgatcctccagaaacttggtcacattgtacaccttgccgccgatgacgagcca 519
||||||||| || || || ||||||||||||||||||||||||||| ||||||| |||||
Sbjct: 197 tccagggtggtcatcaaggaacttggtcacattgtacaccttgccggcgatgactagcca 138
Query: 520 gcagtcgtccttggtgttgtgcttggccacctcctcgagggtgtacaccttgg 572
|||||||||||||| | ||||||||| ||||||||||||||| | |||||||
Sbjct: 137 gcagtcgtccttggaggcgtgcttggcgacctcctcgagggtgaagaccttgg 85
>gb|BQ761695.1|BQ761695 EBem10_SQ001_G14_R embryo, 2 Day germination, no treatment, cv
Optic, EBem10 Hordeum vulgare subsp. vulgare cDNA clone
EBem10_SQ001_G14 5', mRNA sequence
Length = 212
Score = 125 bits (63), Expect = 2e-027
Identities = 99/111 (89%)
Strand = Plus / Minus
Query: 462 cagggtgatcctccagaaacttggtcacattgtacaccttgccgccgatgacgagccagc 521
||||||| || || || ||||||||||||||||||||||||||| ||||||| |||||||
Sbjct: 212 cagggtggtcatcaaggaacttggtcacattgtacaccttgccggcgatgactagccagc 153
Query: 522 agtcgtccttggtgttgtgcttggccacctcctcgagggtgtacaccttgg 572
|||||||||||| | ||||||||| ||||||||||||||| | |||||||
Sbjct: 152 agtcgtccttggaggcgtgcttggcgacctcctcgagggtgaagaccttgg 102
>gb|BM097275.1|BM097275 EBpi07_SQ002_P08_R pistil, 12 DPA, no treatment, cv Optic, EBpi07
Hordeum vulgare subsp. vulgare cDNA clone
EBpi07_SQ002_P08 5', mRNA sequence
Length = 377
Score = 115 bits (58), Expect = 2e-024
Identities = 88/98 (89%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 102 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 43
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcc 271
|||||||||| ||||||||||||||||||| |||||||
Sbjct: 42 gggggaccaagaactggaggatcttgatgatgaactcc 5
>gb|BM373684.2|BM373684 EBma03_SQ002_F09_R maternal, 8 DPA, no treatment, cv Optic, EBma03
Hordeum vulgare subsp. vulgare cDNA clone
EBma03_SQ002_F09 5', mRNA sequence
Length = 191
Score = 115 bits (58), Expect = 2e-024
Identities = 88/98 (89%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 99 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 40
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcc 271
|||||||||| ||||||||||||||||||| |||||||
Sbjct: 39 gggggaccaagaactggaggatcttgatgatgaactcc 2
>gb|BG416756.2|BG416756 HVSMEk0014G02f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0014G02f, mRNA sequence
Length = 478
Score = 105 bits (53), Expect = 2e-021
Identities = 116/137 (84%)
Strand = Plus / Minus
Query: 182 gattccgacttggtgtacatccttacagcgacggccagacccagtattgcgagggggacc 241
||||||||||||||||||||||| | || || || || || ||||| || |||||||||
Sbjct: 214 gattccgacttggtgtacatcctaatggctacagctaggccaagtatggccagggggacc 155
Query: 242 aaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagtgcggctgc 301
| ||||||||||||||||||| |||||| |||||||||| ||||||||||| || |||
Sbjct: 154 agcaactggaggatcttgatgatgaactcaggggtcttgtcttggttgtagtgtggttgc 95
Query: 302 ttggggggcgtgtactt 318
|| || || ||||||||
Sbjct: 94 ttcggcggagtgtactt 78
Score = 34.2 bits (17), Expect = 5.7
Identities = 29/33 (87%)
Strand = Plus / Minus
Query: 363 actcgtccatcattgcacgggcagtgctgctgt 395
|||| |||| ||| |||||||||||| ||||||
Sbjct: 33 actcatccagcatcgcacgggcagtggtgctgt 1
>gb|CA017253.1|CA017253 HV14F07u HV Hordeum vulgare subsp. vulgare cDNA clone HV14F07
3-PRIME, mRNA sequence
Length = 396
Score = 105 bits (53), Expect = 2e-021
Identities = 116/137 (84%)
Strand = Plus / Plus
Query: 182 gattccgacttggtgtacatccttacagcgacggccagacccagtattgcgagggggacc 241
||||||||||||||||||||||| | || || || || || ||||| || |||||||||
Sbjct: 170 gattccgacttggtgtacatcctaatggctacagctaggccaagtatggccagggggacc 229
Query: 242 aaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagtgcggctgc 301
| ||||||||||||||||||| |||||| |||||||||| ||||||||||| || |||
Sbjct: 230 aggaactggaggatcttgatgatgaactcaggggtcttgtcttggttgtagtgtggttgc 289
Query: 302 ttggggggcgtgtactt 318
|| || || ||||||||
Sbjct: 290 ttcggcggagtgtactt 306
Score = 46.1 bits (23), Expect = 0.002
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 363 actcgtccatcattgcacgggcagtgctgctgtgccccacatc 405
|||| |||| ||| |||||||||||| |||||||||| |||||
Sbjct: 351 actcatccagcatcgcacgggcagtggtgctgtgcccgacatc 393
>gb|CA032026.1|CA032026 HX11M18r HX Hordeum vulgare subsp. vulgare cDNA clone HX11M18
5-PRIME, mRNA sequence
Length = 391
Score = 105 bits (53), Expect = 2e-021
Identities = 116/137 (84%)
Strand = Plus / Minus
Query: 182 gattccgacttggtgtacatccttacagcgacggccagacccagtattgcgagggggacc 241
||||||||||||||||||||||| | || || || || || ||||| || |||||||||
Sbjct: 221 gattccgacttggtgtacatcctaatggctacagctaggccaagtatggccagggggacc 162
Query: 242 aaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagtgcggctgc 301
| ||||||||||||||||||| |||||| |||||||||| ||||||||||| || |||
Sbjct: 161 aggaactggaggatcttgatgatgaactcaggggtcttgtcttggttgtagtgtggttgc 102
Query: 302 ttggggggcgtgtactt 318
|| || || ||||||||
Sbjct: 101 ttcggcggagtgtactt 85
>gb|CB876603.1|CB876603 HX11M18w HX Hordeum vulgare subsp. vulgare cDNA clone HX11M18
3-PRIME, mRNA sequence
Length = 389
Score = 105 bits (53), Expect = 2e-021
Identities = 116/137 (84%)
Strand = Plus / Plus
Query: 182 gattccgacttggtgtacatccttacagcgacggccagacccagtattgcgagggggacc 241
||||||||||||||||||||||| | || || || || || ||||| || |||||||||
Sbjct: 171 gattccgacttggtgtacatcctaatggctacagctaggccaagtatggccagggggacc 230
Query: 242 aaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagtgcggctgc 301
| ||||||||||||||||||| |||||| |||||||||| ||||||||||| || |||
Sbjct: 231 aggaactggaggatcttgatgatgaactcaggggtcttgtcttggttgtagtgtggttgc 290
Query: 302 ttggggggcgtgtactt 318
|| || || ||||||||
Sbjct: 291 ttcggcggagtgtactt 307
>gb|BU996256.1|BU996256 HM13A14r HM Hordeum vulgare subsp. vulgare cDNA clone HM13A14
5-PRIME, mRNA sequence
Length = 166
Score = 103 bits (52), Expect = 7e-021
Identities = 130/156 (83%)
Strand = Plus / Minus
Query: 313 gtacttcaccttggtgggtatcgtggctgcatcaatctcacccactaagtactcgtccat 372
|||||| ||||||||||||||||||| || || ||||| || || |||||||||||||
Sbjct: 166 gtacttgaccttggtgggtatcgtggtcgcgtcgatctcgccgacatagtactcgtccat 107
Query: 373 cattgcacgggcagtgctgctgtgccccacatcttcgaaatcatcggtagcatccttggc 432
||| || || || || ||||||| |||||||| || || |||||||| || ||||||||
Sbjct: 106 catcgcccgagcggtcgtgctgtgtcccacatcctcaaagtcatcggtcgcgtccttggc 47
Query: 433 agtggaagacagcagaacatcatcgcctccagggtg 468
||| |||| |||||| || || ||||||||||||||
Sbjct: 46 agttgaagtcagcaggacgtcgtcgcctccagggtg 11
>gb|CA024880.1|CA024880 HZ50J06r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ50J06
5-PRIME, mRNA sequence
Length = 348
Score = 99.6 bits (50), Expect = 1e-019
Identities = 77/86 (89%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
||||| |||| |||||||||||||| |||| ||| ||||||||||| |||||||| || |
Sbjct: 96 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtatcgcca 37
Query: 234 gggggaccaaaaactggaggatcttg 259
|||||||||| |||||||||||||||
Sbjct: 36 gggggaccaagaactggaggatcttg 11
>gb|BQ765870.1|BQ765870 EBro03_SQ008_L08_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ008_L08 5', mRNA sequence
Length = 175
Score = 87.7 bits (44), Expect = 4e-016
Identities = 74/84 (88%)
Strand = Plus / Minus
Query: 479 aacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttggtgttg 538
|||||||||||||||||||| |||||| ||||||| |||||||||||||| |||| | |
Sbjct: 159 aacttggtcacattgtacactttgccggcgatgactagccagcagtcgtctttggaggcg 100
Query: 539 tgcttggccacctcctcgagggtg 562
|||||||| || || |||||||||
Sbjct: 99 tgcttggcgacttcttcgagggtg 76
>gb|BU995147.1|BU995147 HM09F15r HM Hordeum vulgare subsp. vulgare cDNA clone HM09F15
5-PRIME, mRNA sequence
Length = 203
Score = 87.7 bits (44), Expect = 4e-016
Identities = 53/56 (94%)
Strand = Plus / Minus
Query: 507 cgatgacgagccagcagtcgtccttggtgttgtgcttggccacctcctcgagggtg 562
|||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||
Sbjct: 185 cgatgatgagccagcagtcgtccttggtgttgtgcttggacacctcctccagggtg 130
>gb|BM099737.2|BM099737 EBes01_SQ004_C05_R embryo sac, 4-6 DPA, no treatment, cv Optic,
EBes01 Hordeum vulgare subsp. vulgare cDNA clone
EBes01_SQ004_C05 5', mRNA sequence
Length = 428
Score = 63.9 bits (32), Expect = 6e-009
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 494 tacaccttgccgccgatgacgagccagcagtcgtccttggtgttgtgcttggccacctcc 553
|||||||||||| ||||||||||||||||||| | || |||||||||||| ||||||
Sbjct: 91 tacaccttgccggcgatgacgagccagcagtccttggtgacgttgtgcttggcgacctcc 32
Query: 554 tcga 557
||||
Sbjct: 31 tcga 28
>gb|BI777170.2|BI777170 EBro03_SQ002_D24_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ002_D24 5', mRNA sequence
Length = 450
Score = 63.9 bits (32), Expect = 6e-009
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 494 tacaccttgccgccgatgacgagccagcagtcgtccttggtgttgtgcttggccacctcc 553
|||||||||||| ||||||||||||||||||| | || |||||||||||| ||||||
Sbjct: 147 tacaccttgccggcgatgacgagccagcagtccttggtgacgttgtgcttggcgacctcc 88
Query: 554 tcga 557
||||
Sbjct: 87 tcga 84
>gb|BM370839.2|BM370839 EBro04_SQ002_H15_R root, 3 week, salt-stressed, cv Optic, EBro04
Hordeum vulgare subsp. vulgare cDNA clone
EBro04_SQ002_H15 5', mRNA sequence
Length = 622
Score = 63.9 bits (32), Expect = 6e-009
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 494 tacaccttgccgccgatgacgagccagcagtcgtccttggtgttgtgcttggccacctcc 553
|||||||||||| ||||||||||||||||||| | || |||||||||||| ||||||
Sbjct: 106 tacaccttgccggcgatgacgagccagcagtccttggtgacgttgtgcttggcgacctcc 47
Query: 554 tcga 557
||||
Sbjct: 46 tcga 43
>gb|BU973644.1|BU973644 HB25J03r BC Hordeum vulgare subsp. vulgare cDNA clone HB25J03
5-PRIME, mRNA sequence
Length = 499
Score = 63.9 bits (32), Expect = 6e-009
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 494 tacaccttgccgccgatgacgagccagcagtcgtccttggtgttgtgcttggccacctcc 553
|||||||||||| ||||||||||||||||||| | || |||||||||||| ||||||
Sbjct: 250 tacaccttgccggcgatgacgagccagcagtccttggtgacgttgtgcttggcgacctcc 191
Query: 554 tcga 557
||||
Sbjct: 190 tcga 187
>gb|BU976786.1|BU976786 HA10F01r HA Hordeum vulgare subsp. vulgare cDNA clone HA10F01
5-PRIME, mRNA sequence
Length = 630
Score = 63.9 bits (32), Expect = 6e-009
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 494 tacaccttgccgccgatgacgagccagcagtcgtccttggtgttgtgcttggccacctcc 553
|||||||||||| ||||||||||||||||||| | || |||||||||||| ||||||
Sbjct: 245 tacaccttgccggcgatgacgagccagcagtccttggtgacgttgtgcttggcgacctcc 186
Query: 554 tcga 557
||||
Sbjct: 185 tcga 182
>gb|BU976787.1|BU976787 HA10F01u HA Hordeum vulgare subsp. vulgare cDNA clone HA10F01
3-PRIME, mRNA sequence
Length = 533
Score = 63.9 bits (32), Expect = 6e-009
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 494 tacaccttgccgccgatgacgagccagcagtcgtccttggtgttgtgcttggccacctcc 553
|||||||||||| ||||||||||||||||||| | || |||||||||||| ||||||
Sbjct: 406 tacaccttgccggcgatgacgagccagcagtccttggtgacgttgtgcttggcgacctcc 465
Query: 554 tcga 557
||||
Sbjct: 466 tcga 469
>gb|BU977130.1|BU977130 HA10O06r HA Hordeum vulgare subsp. vulgare cDNA clone HA10O06
5-PRIME, mRNA sequence
Length = 576
Score = 63.9 bits (32), Expect = 6e-009
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 494 tacaccttgccgccgatgacgagccagcagtcgtccttggtgttgtgcttggccacctcc 553
|||||||||||| ||||||||||||||||||| | || |||||||||||| ||||||
Sbjct: 245 tacaccttgccggcgatgacgagccagcagtccttggtgacgttgtgcttggcgacctcc 186
Query: 554 tcga 557
||||
Sbjct: 185 tcga 182
>gb|BU977131.1|BU977131 HA10O06u HA Hordeum vulgare subsp. vulgare cDNA clone HA10O06
3-PRIME, mRNA sequence
Length = 535
Score = 63.9 bits (32), Expect = 6e-009
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 494 tacaccttgccgccgatgacgagccagcagtcgtccttggtgttgtgcttggccacctcc 553
|||||||||||| ||||||||||||||||||| | || |||||||||||| ||||||
Sbjct: 406 tacaccttgccggcgatgacgagccagcagtccttggtgacgttgtgcttggcgacctcc 465
Query: 554 tcga 557
||||
Sbjct: 466 tcga 469
>gb|BU984610.1|BU984610 HF04H01r HF Hordeum vulgare subsp. vulgare cDNA clone HF04H01
5-PRIME, mRNA sequence
Length = 546
Score = 63.9 bits (32), Expect = 6e-009
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 494 tacaccttgccgccgatgacgagccagcagtcgtccttggtgttgtgcttggccacctcc 553
|||||||||||| ||||||||||||||||||| | || |||||||||||| ||||||
Sbjct: 230 tacaccttgccggcgatgacgagccagcagtccttggtgacgttgtgcttggcgacctcc 171
Query: 554 tcga 557
||||
Sbjct: 170 tcga 167
>gb|CA012196.1|CA012196 HT04L05r HT Hordeum vulgare subsp. vulgare cDNA clone HT04L05
5-PRIME, mRNA sequence
Length = 510
Score = 63.9 bits (32), Expect = 6e-009
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 494 tacaccttgccgccgatgacgagccagcagtcgtccttggtgttgtgcttggccacctcc 553
|||||||||||| ||||||||||||||||||| | || |||||||||||| ||||||
Sbjct: 243 tacaccttgccggcgatgacgagccagcagtccttggtgacgttgtgcttggcgacctcc 184
Query: 554 tcga 557
||||
Sbjct: 183 tcga 180
>gb|CA017847.1|CA017847 HV06H15r HV Hordeum vulgare subsp. vulgare cDNA clone HV06H15
5-PRIME, mRNA sequence
Length = 500
Score = 63.9 bits (32), Expect = 6e-009
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 494 tacaccttgccgccgatgacgagccagcagtcgtccttggtgttgtgcttggccacctcc 553
|||||||||||| ||||||||||||||||||| | || |||||||||||| ||||||
Sbjct: 245 tacaccttgccggcgatgacgagccagcagtccttggtgacgttgtgcttggcgacctcc 186
Query: 554 tcga 557
||||
Sbjct: 185 tcga 182
>gb|CA028391.1|CA028391 HZ61N10r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ61N10
5-PRIME, mRNA sequence
Length = 556
Score = 63.9 bits (32), Expect = 6e-009
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 494 tacaccttgccgccgatgacgagccagcagtcgtccttggtgttgtgcttggccacctcc 553
|||||||||||| ||||||||||||||||||| | || |||||||||||| ||||||
Sbjct: 239 tacaccttgccggcgatgacgagccagcagtccttggtgacgttgtgcttggcgacctcc 180
Query: 554 tcga 557
||||
Sbjct: 179 tcga 176
>gb|BM441216.2|BM441216 EBed02_SQ002_M02_R endosperm, 8 DPA, no treatment, cv Optic, EBed02
Hordeum vulgare subsp. vulgare cDNA clone
EBed02_SQ002_M02 5', mRNA sequence
Length = 320
Score = 61.9 bits (31), Expect = 3e-008
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtat 228
||||| |||| |||||||||||||| |||| ||| ||||||||||| ||||||||
Sbjct: 57 actagacagactccgacttggtgtagatccgtacggcgacggccaggcccagtat 3
>gb|CV055448.1|CV055448 BNEL11F8 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL11F8 5' similar to Zea mays
PCO106542 mRNA sequence
Length = 600
Score = 60.0 bits (30), Expect = 1e-007
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 488 acattgtacaccttgccgccgatgacgagccagcagtc 525
||||| |||||||||||| |||||||||||||||||||
Sbjct: 444 acattatacaccttgccggcgatgacgagccagcagtc 481
>gb|CV055677.1|CV055677 BNEL122c3 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL122c3 5' similar to putative
cytochrome, mRNA sequence
Length = 573
Score = 60.0 bits (30), Expect = 1e-007
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 488 acattgtacaccttgccgccgatgacgagccagcagtc 525
||||| |||||||||||| |||||||||||||||||||
Sbjct: 444 acattatacaccttgccggcgatgacgagccagcagtc 481
>gb|BF625784.2|BF625784 HVSMEa0013J13f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0013J13f, mRNA sequence
Length = 480
Score = 58.0 bits (29), Expect = 4e-007
Identities = 42/45 (93%), Gaps = 1/45 (2%)
Strand = Plus / Minus
Query: 509 atgacgagccagcagtc-gtccttggtgttgtgcttggccacctc 552
|||| |||||||||||| |||||||||||||||||||| ||||||
Sbjct: 301 atgatgagccagcagtctgtccttggtgttgtgcttggacacctc 257
>gb|BQ764912.1|BQ764912 EBca01_SQ005_B09_R carpel, pre-anthesis, no treatment, cv Optic,
EBca01 Hordeum vulgare subsp. vulgare cDNA clone
EBca01_SQ005_B09 5', mRNA sequence
Length = 716
Score = 58.0 bits (29), Expect = 4e-007
Identities = 42/45 (93%), Gaps = 1/45 (2%)
Strand = Plus / Minus
Query: 509 atgacgagccagcagtc-gtccttggtgttgtgcttggccacctc 552
|||| |||||||||||| |||||||||||||||||||| ||||||
Sbjct: 497 atgatgagccagcagtctgtccttggtgttgtgcttggacacctc 453
>gb|AU090082.1|AU090082 AU090082 Hordeum vulgare subsp. vulgare Upper three leaves at
heading stage Hordeum vulgare subsp. vulgare cDNA clone
haruna_lib1_052, mRNA sequence
Length = 462
Score = 56.0 bits (28), Expect = 2e-006
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 494 tacaccttgccgccgatgacgagccagcagtc 525
|||||||||||| |||||||||||||||||||
Sbjct: 238 tacaccttgccggcgatgacgagccagcagtc 207
>gb|BE231070.1|BE231070 HVSMEg0016F05f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0016F05f, mRNA sequence
Length = 942
Score = 56.0 bits (28), Expect = 2e-006
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 494 tacaccttgccgccgatgacgagccagcagtc 525
|||||||||||| |||||||||||||||||||
Sbjct: 235 tacaccttgccggcgatgacgagccagcagtc 204
>gb|BE060577.3|BE060577 HVSMEg0012K21f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0012K21f, mRNA sequence
Length = 813
Score = 56.0 bits (28), Expect = 2e-006
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 494 tacaccttgccgccgatgacgagccagcagtc 525
|||||||||||| |||||||||||||||||||
Sbjct: 227 tacaccttgccggcgatgacgagccagcagtc 196
>gb|BG415041.2|BG415041 HVSMEk0004M21f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0004M21f, mRNA sequence
Length = 606
Score = 56.0 bits (28), Expect = 2e-006
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 494 tacaccttgccgccgatgacgagccagcagtc 525
|||||||||||| |||||||||||||||||||
Sbjct: 184 tacaccttgccggcgatgacgagccagcagtc 153
>gb|BE216802.3|BE216802 HV_CEb0011K02f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0011K02f, mRNA sequence
Length = 608
Score = 56.0 bits (28), Expect = 2e-006
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 494 tacaccttgccgccgatgacgagccagcagtc 525
|||||||||||| |||||||||||||||||||
Sbjct: 146 tacaccttgccggcgatgacgagccagcagtc 115
>gb|AV917313.1|AV917313 AV917313 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags18g10 5', mRNA sequence
Length = 667
Score = 56.0 bits (28), Expect = 2e-006
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 494 tacaccttgccgccgatgacgagccagcagtc 525
|||||||||||| |||||||||||||||||||
Sbjct: 214 tacaccttgccggcgatgacgagccagcagtc 183
>gb|AV922490.1|AV922490 AV922490 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags18g10 3', mRNA sequence
Length = 692
Score = 56.0 bits (28), Expect = 2e-006
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 494 tacaccttgccgccgatgacgagccagcagtc 525
|||||||||||| |||||||||||||||||||
Sbjct: 510 tacaccttgccggcgatgacgagccagcagtc 541
>gb|BJ453666.1|BJ453666 BJ453666 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak44a16 5', mRNA sequence
Length = 527
Score = 56.0 bits (28), Expect = 2e-006
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 494 tacaccttgccgccgatgacgagccagcagtc 525
|||||||||||| |||||||||||||||||||
Sbjct: 113 tacaccttgccggcgatgacgagccagcagtc 82
>gb|BJ461207.1|BJ461207 BJ461207 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak44a16 3', mRNA sequence
Length = 490
Score = 56.0 bits (28), Expect = 2e-006
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 494 tacaccttgccgccgatgacgagccagcagtc 525
|||||||||||| |||||||||||||||||||
Sbjct: 377 tacaccttgccggcgatgacgagccagcagtc 408
>gb|BU997097.1|BU997097 HI06O12r HI Hordeum vulgare subsp. vulgare cDNA clone HI06O12
5-PRIME, mRNA sequence
Length = 592
Score = 56.0 bits (28), Expect = 2e-006
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 494 tacaccttgccgccgatgacgagccagcagtc 525
|||||||||||| |||||||||||||||||||
Sbjct: 72 tacaccttgccggcgatgacgagccagcagtc 41
>gb|CV056095.1|CV056095 BNEL13H2 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL13H2 5' similar to putative
cytochrome, mRNA sequence
Length = 543
Score = 56.0 bits (28), Expect = 2e-006
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 494 tacaccttgccgccgatgacgagccagcagtc 525
|||||||||||| |||||||||||||||||||
Sbjct: 416 tacaccttgccggcgatgacgagccagcagtc 447
>gb|CV056184.1|CV056184 BNEL14H2 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL14H2 5' similar to putative
cytochrome, mRNA sequence
Length = 565
Score = 56.0 bits (28), Expect = 2e-006
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 494 tacaccttgccgccgatgacgagccagcagtc 525
|||||||||||| |||||||||||||||||||
Sbjct: 438 tacaccttgccggcgatgacgagccagcagtc 469
>gb|CV057515.1|CV057515 BNEL28g11 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL28g11 5' similar to putative
cytochrome, mRNA sequence
Length = 543
Score = 56.0 bits (28), Expect = 2e-006
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 494 tacaccttgccgccgatgacgagccagcagtc 525
|||||||||||| |||||||||||||||||||
Sbjct: 416 tacaccttgccggcgatgacgagccagcagtc 447
>gb|CV058779.1|CV058779 BNEL40g6 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL40g6 5' similar to putative
cytochrome, mRNA sequence
Length = 585
Score = 56.0 bits (28), Expect = 2e-006
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 494 tacaccttgccgccgatgacgagccagcagtc 525
|||||||||||| |||||||||||||||||||
Sbjct: 438 tacaccttgccggcgatgacgagccagcagtc 469
>gb|CV060161.1|CV060161 BNEL55b10 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL55b10 5' similar to putative
cytochrome, mRNA sequence
Length = 534
Score = 56.0 bits (28), Expect = 2e-006
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 494 tacaccttgccgccgatgacgagccagcagtc 525
|||||||||||| |||||||||||||||||||
Sbjct: 438 tacaccttgccggcgatgacgagccagcagtc 469
>gb|CV063562.1|CV063562 BNEL90f9 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL90f9 5' similar to putative
cytochrome, mRNA sequence
Length = 543
Score = 56.0 bits (28), Expect = 2e-006
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 494 tacaccttgccgccgatgacgagccagcagtc 525
|||||||||||| |||||||||||||||||||
Sbjct: 416 tacaccttgccggcgatgacgagccagcagtc 447
>gb|BF267345.2|BF267345 HV_CEa0017K09f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0017K09f, mRNA sequence
Length = 895
Score = 50.1 bits (25), Expect = 1e-004
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 517 ccagcagtcgtccttggtgttgtgcttggccacctcctcgagggtgtacaccttgg 572
||||||||||||||||| | ||||||||| |||||| ||||||| | |||||||
Sbjct: 164 ccagcagtcgtccttggaggcgtgcttggcgccctcctngagggtgaagaccttgg 109
>gb|AW983327.2|AW983327 HVSMEg0010D16f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0010D16f, mRNA sequence
Length = 832
Score = 48.1 bits (24), Expect = 4e-004
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 494 tacaccttgccgccgatgacgagccagcagtc 525
|||||||||||| ||||||||||||||||||
Sbjct: 529 tacaccttgccggagatgacgagccagcagtc 498
>gb|BU987937.1|BU987937 HF16D04r HF Hordeum vulgare subsp. vulgare cDNA clone HF16D04
5-PRIME, mRNA sequence
Length = 562
Score = 48.1 bits (24), Expect = 4e-004
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 494 tacaccttgccgccgatgacgagccagc 521
|||||||||||| |||||||||||||||
Sbjct: 37 tacaccttgccggcgatgacgagccagc 10
>gb|CV058800.1|CV058800 BNEL41a6 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL41a6 5' similar to putative
cytochrome, mRNA sequence
Length = 494
Score = 48.1 bits (24), Expect = 4e-004
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 494 tacaccttgccgccgatgacgagccagcagtc 525
|||||||||||| ||||||||||||| |||||
Sbjct: 438 tacaccttgccggcgatgacgagccatcagtc 469
>gb|CA018006.1|CA018006 HV07C02r HV Hordeum vulgare subsp. vulgare cDNA clone HV07C02
5-PRIME, mRNA sequence
Length = 514
Score = 44.1 bits (22), Expect = 0.006
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 499 cttgccgccgatgacgagccagcagtcgtccttggtgttgtg 540
||||||| ||| ||||| ||||||||||||| |||||||||
Sbjct: 169 cttgccgtcgacgacgatccagcagtcgtccggggtgttgtg 128
>gb|CV061698.1|CV061698 BNEL70h3 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL70h3 5' similar to cytochrome B5,
mRNA sequence
Length = 567
Score = 44.1 bits (22), Expect = 0.006
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 499 cttgccgccgatgacgagccagcagtcgtccttggtgttgtg 540
||||||| ||| ||||| ||||||||||||| |||||||||
Sbjct: 196 cttgccgtcgacgacgatccagcagtcgtccggggtgttgtg 155
>gb|BF257383.3|BF257383 HVSMEf0012L21f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0012L21f, mRNA sequence
Length = 427
Score = 42.1 bits (21), Expect = 0.024
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 180 cagattccgacttggtgtacatcct 204
|||||||| ||||||||||||||||
Sbjct: 238 cagattcccacttggtgtacatcct 214
>gb|BG344164.2|BG344164 HVSMEg0007O08f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0007O08f, mRNA sequence
Length = 811
Score = 42.1 bits (21), Expect = 0.024
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 607 agggtggaggaggcggaggcgagga 631
|||||||||||||||| ||||||||
Sbjct: 725 agggtggaggaggcgggggcgagga 749
>gb|BI953240.1|BI953240 HVSMEm0011N02f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0011N02f, mRNA sequence
Length = 477
Score = 40.1 bits (20), Expect = 0.093
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 608 gggtggaggaggcggaggcgagga 631
|||||||||||| |||||||||||
Sbjct: 126 gggtggaggaggtggaggcgagga 103
>gb|BI953789.1|BI953789 HVSMEm0014H22f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0014H22f, mRNA sequence
Length = 706
Score = 40.1 bits (20), Expect = 0.093
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 608 gggtggaggaggcggaggcgagga 631
|||||||||||| |||||||||||
Sbjct: 153 gggtggaggaggtggaggcgagga 130
>gb|BI955125.1|BI955125 HVSMEm0021I03f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0021I03f, mRNA sequence
Length = 669
Score = 40.1 bits (20), Expect = 0.093
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 608 gggtggaggaggcggaggcgagga 631
|||||||||||| |||||||||||
Sbjct: 121 gggtggaggaggtggaggcgagga 98
>gb|BI955473.1|BI955473 HVSMEm0023E14f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0023E14f, mRNA sequence
Length = 671
Score = 40.1 bits (20), Expect = 0.093
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 608 gggtggaggaggcggaggcgagga 631
|||||||||||| |||||||||||
Sbjct: 96 gggtggaggaggtggaggcgagga 73
>gb|BE215383.1|BE215383 HV_CEb0006K10f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0006K10f, mRNA sequence
Length = 923
Score = 40.1 bits (20), Expect = 0.093
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 608 gggtggaggaggcggaggcgagga 631
|||||||||||| |||||||||||
Sbjct: 86 gggtggaggaggtggaggcgagga 63
>gb|AL505584.1|AL505584 AL505584 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW08O17V 5', mRNA sequence
Length = 691
Score = 36.2 bits (18), Expect = 1.4
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 579 acatcctcgtcttcctct 596
||||||||||||||||||
Sbjct: 313 acatcctcgtcttcctct 330
>gb|BF628238.1|BF628238 HVSMEb0003I01f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0003I01f, mRNA sequence
Length = 506
Score = 36.2 bits (18), Expect = 1.4
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 640 tgcaagctgttgctgcttgctg 661
||||||||| ||||||||||||
Sbjct: 366 tgcaagctgctgctgcttgctg 387
>gb|BF256352.2|BF256352 HVSMEf0009F10f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0009F10f, mRNA sequence
Length = 903
Score = 36.2 bits (18), Expect = 1.4
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 579 acatcctcgtcttcctct 596
||||||||||||||||||
Sbjct: 306 acatcctcgtcttcctct 323
>gb|BF257596.2|BF257596 HVSMEf0013E23f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0013E23f, mRNA sequence
Length = 528
Score = 36.2 bits (18), Expect = 1.4
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 579 acatcctcgtcttcctct 596
||||||||||||||||||
Sbjct: 287 acatcctcgtcttcctct 304
>gb|BG368670.1|BG368670 HVSMEi0020C19f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0020C19f, mRNA sequence
Length = 830
Score = 36.2 bits (18), Expect = 1.4
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 579 acatcctcgtcttcctct 596
||||||||||||||||||
Sbjct: 302 acatcctcgtcttcctct 319
>gb|BI952641.1|BI952641 HVSMEm0007E13f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0007E13f, mRNA sequence
Length = 1196
Score = 36.2 bits (18), Expect = 1.4
Identities = 21/22 (95%)
Strand = Plus / Minus
Query: 608 gggtggaggaggcggaggcgag 629
|||||||||||| |||||||||
Sbjct: 93 gggtggaggaggtggaggcgag 72
>gb|BG365477.2|BG365477 HVSMEi0002N15f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0002N15f, mRNA sequence
Length = 859
Score = 36.2 bits (18), Expect = 1.4
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 579 acatcctcgtcttcctct 596
||||||||||||||||||
Sbjct: 5 acatcctcgtcttcctct 22
>gb|BG369379.2|BG369379 HVSMEi0024C18f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0024C18f, mRNA sequence
Length = 859
Score = 36.2 bits (18), Expect = 1.4
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 579 acatcctcgtcttcctct 596
||||||||||||||||||
Sbjct: 297 acatcctcgtcttcctct 314
>gb|BQ467950.1|BQ467950 HR01H03r HR Hordeum vulgare subsp. vulgare cDNA clone HR01H03
5-PRIME, mRNA sequence
Length = 368
Score = 36.2 bits (18), Expect = 1.4
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 579 acatcctcgtcttcctct 596
||||||||||||||||||
Sbjct: 316 acatcctcgtcttcctct 333
>gb|BQ471515.1|BQ471515 HV02K17r HV Hordeum vulgare subsp. vulgare cDNA clone HV02K17
5-PRIME, mRNA sequence
Length = 573
Score = 36.2 bits (18), Expect = 1.4
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 579 acatcctcgtcttcctct 596
||||||||||||||||||
Sbjct: 57 acatcctcgtcttcctct 74
>gb|BQ471902.1|BQ471902 HV03N04r HV Hordeum vulgare subsp. vulgare cDNA clone HV03N04
5-PRIME, mRNA sequence
Length = 492
Score = 36.2 bits (18), Expect = 1.4
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 579 acatcctcgtcttcctct 596
||||||||||||||||||
Sbjct: 57 acatcctcgtcttcctct 74
>gb|BM371947.2|BM371947 EBma08_SQ004_H18_R maternal, 28 DPA, no treatment, cv Optic, EBma08
Hordeum vulgare subsp. vulgare cDNA clone
EBma08_SQ004_H18 5', mRNA sequence
Length = 514
Score = 36.2 bits (18), Expect = 1.4
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 579 acatcctcgtcttcctct 596
||||||||||||||||||
Sbjct: 304 acatcctcgtcttcctct 321
>gb|CA018087.1|CA018087 HV07G18r HV Hordeum vulgare subsp. vulgare cDNA clone HV07G18
5-PRIME, mRNA sequence
Length = 554
Score = 36.2 bits (18), Expect = 1.4
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 579 acatcctcgtcttcctct 596
||||||||||||||||||
Sbjct: 292 acatcctcgtcttcctct 309
>gb|CB877554.1|CB877554 HP05F18T HP Hordeum vulgare subsp. vulgare cDNA clone HP05F18
5-PRIME, mRNA sequence
Length = 590
Score = 36.2 bits (18), Expect = 1.4
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 579 acatcctcgtcttcctct 596
||||||||||||||||||
Sbjct: 220 acatcctcgtcttcctct 237
>gb|BE422211.1|BE422211 HWM021cF.02r ITEC HWM Barley Leaf Library Hordeum vulgare subsp.
vulgare cDNA clone HWM021cF.02, mRNA sequence
Length = 1130
Score = 34.2 bits (17), Expect = 5.7
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 52 tagacgtacgtctcaca 68
|||||||||||||||||
Sbjct: 1097 tagacgtacgtctcaca 1081
>gb|AL499719.1|AL499719 AL499719 Hordeum vulgare Barke etiolated leaves Hordeum vulgare
subsp. vulgare cDNA clone HK03B14r 3', mRNA sequence
Length = 553
Score = 34.2 bits (17), Expect = 5.7
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 612 ggaggaggcggaggcga 628
|||||||||||||||||
Sbjct: 523 ggaggaggcggaggcga 507
>gb|AL501853.1|AL501853 AL501853 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW05J22u 3', mRNA sequence
Length = 674
Score = 34.2 bits (17), Expect = 5.7
Identities = 26/29 (89%)
Strand = Plus / Plus
Query: 524 tcgtccttggtgttgtgcttggccacctc 552
||||||| | ||||| |||||||||||||
Sbjct: 402 tcgtcctggctgttgagcttggccacctc 430
>gb|AL504547.1|AL504547 AL504547 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW05J22V 5', mRNA sequence
Length = 700
Score = 34.2 bits (17), Expect = 5.7
Identities = 26/29 (89%)
Strand = Plus / Minus
Query: 524 tcgtccttggtgttgtgcttggccacctc 552
||||||| | ||||| |||||||||||||
Sbjct: 359 tcgtcctggctgttgagcttggccacctc 331
>gb|AL506867.1|AL506867 AL506867 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY04H17T 5',
mRNA sequence
Length = 573
Score = 34.2 bits (17), Expect = 5.7
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 612 ggaggaggcggaggcga 628
|||||||||||||||||
Sbjct: 76 ggaggaggcggaggcga 92
>gb|AL507531.1|AL507531 AL507531 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY06B16V 5',
mRNA sequence
Length = 647
Score = 34.2 bits (17), Expect = 5.7
Identities = 26/29 (89%)
Strand = Plus / Minus
Query: 524 tcgtccttggtgttgtgcttggccacctc 552
||||||| | ||||| |||||||||||||
Sbjct: 604 tcgtcctggctgttgagcttggccacctc 576
>gb|AL510642.1|AL510642 AL510642 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY05J03u 3',
mRNA sequence
Length = 564
Score = 34.2 bits (17), Expect = 5.7
Identities = 26/29 (89%)
Strand = Plus / Plus
Query: 524 tcgtccttggtgttgtgcttggccacctc 552
||||||| | ||||| |||||||||||||
Sbjct: 392 tcgtcctggctgttgagcttggccacctc 420
>gb|BF621680.2|BF621680 HVSMEa0011N13f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0011N13f, mRNA sequence
Length = 857
Score = 34.2 bits (17), Expect = 5.7
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 615 ggaggcggaggcgagga 631
|||||||||||||||||
Sbjct: 110 ggaggcggaggcgagga 94
>gb|BF621172.3|BF621172 HVSMEa0004N02f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0004N02f, mRNA sequence
Length = 758
Score = 34.2 bits (17), Expect = 5.7
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 615 ggaggcggaggcgagga 631
|||||||||||||||||
Sbjct: 185 ggaggcggaggcgagga 169
>gb|BG309920.1|BG309920 HVSMEc0015B02f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0015B02f, mRNA sequence
Length = 795
Score = 34.2 bits (17), Expect = 5.7
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 609 ggtggaggaggcggagg 625
|||||||||||||||||
Sbjct: 311 ggtggaggaggcggagg 327
>gb|AW982158.2|AW982158 HVSMEg0002A22f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0002A22f, mRNA sequence
Length = 839
Score = 34.2 bits (17), Expect = 5.7
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 546 ccacctcctcgagggtg 562
|||||||||||||||||
Sbjct: 425 ccacctcctcgagggtg 409
>gb|BI952343.1|BI952343 HVSMEm0006A04f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0006A04f, mRNA sequence
Length = 876
Score = 34.2 bits (17), Expect = 5.7
Identities = 26/29 (89%)
Strand = Plus / Minus
Query: 524 tcgtccttggtgttgtgcttggccacctc 552
||||||| | ||||| |||||||||||||
Sbjct: 449 tcgtcctggctgttgagcttggccacctc 421
>gb|BI960474.1|BI960474 HVSMEn0024L14f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0024L14f, mRNA sequence
Length = 638
Score = 34.2 bits (17), Expect = 5.7
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 615 ggaggcggaggcgagga 631
|||||||||||||||||
Sbjct: 108 ggaggcggaggcgagga 92
Database: Hordeum_nucl_with_EST.fasta
Posted date: May 2, 2006 2:38 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 92,912
Number of Sequences: 312970
Number of extensions: 92912
Number of successful extensions: 29551
Number of sequences better than 10.0: 283
Number of HSP's better than 10.0 without gapping: 283
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 29083
Number of HSP's gapped (non-prelim): 418
length of query: 684
length of database: 175,134,539
effective HSP length: 19
effective length of query: 665
effective length of database: 169,188,109
effective search space: 112510092485
effective search space used: 112510092485
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 17 (34.2 bits)