BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.202
(3202 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
emb|X69931.1|HVRNASS H.vulgare mRNA for sucrose synthase 1737 0.0
gb|BQ754675.1|BQ754675 EBed01_SQ003_H22_R endosperm, 6 DPA,... 698 0.0
gb|CK124965.1|CK124965 BES1824111A2d09 BES1824 Hordeum vulg... 696 0.0
gb|AL508345.1|AL508345 AL508345 Hordeum vulgare Barke devel... 688 0.0
gb|BG418599.2|BG418599 HVSMEk0023G16f Hordeum vulgare testa... 668 0.0
gb|BI958295.1|BI958295 HVSMEn0014E13f Hordeum vulgare rachi... 662 0.0
gb|AL506943.1|AL506943 AL506943 Hordeum vulgare Barke devel... 660 0.0
gb|BG418071.1|BG418071 HVSMEk0021C19f Hordeum vulgare testa... 638 0.0
gb|BG345116.2|BG345116 HVSMEg0018M02f Hordeum vulgare pre-a... 634 e-180
gb|AL508689.1|AL508689 AL508689 Hordeum vulgare Barke devel... 605 e-171
gb|BI951201.1|BI951201 HVSMEl0025A10f Hordeum vulgare spike... 593 e-167
gb|BG414980.2|BG414980 HVSMEk0004I12f Hordeum vulgare testa... 585 e-165
gb|BQ460709.1|BQ460709 HA06C13r HA Hordeum vulgare subsp. v... 583 e-164
gb|BU968793.1|BU968793 HB08J17r BC Hordeum vulgare subsp. v... 583 e-164
gb|BQ459992.1|BQ459992 HA07I08r HA Hordeum vulgare subsp. v... 581 e-164
gb|AL508802.1|AL508802 AL508802 Hordeum vulgare Barke devel... 579 e-163
gb|AL510063.1|AL510063 AL510063 Hordeum vulgare Barke devel... 579 e-163
gb|BI950121.1|BI950121 HVSMEl0018N18f Hordeum vulgare spike... 579 e-163
gb|BU973694.1|BU973694 HB25K18r BC Hordeum vulgare subsp. v... 579 e-163
gb|BU987212.1|BU987212 HF14B23r HF Hordeum vulgare subsp. v... 579 e-163
gb|CK122773.1|CK122773 BES1824105l14 BES1824 Hordeum vulgar... 573 e-161
gb|BG415722.2|BG415722 HVSMEk0007J09f Hordeum vulgare testa... 569 e-160
gb|BU969810.1|BU969810 HB12K17r BC Hordeum vulgare subsp. v... 567 e-160
gb|BU966933.1|BU966933 HB02M23r BC Hordeum vulgare subsp. v... 565 e-159
gb|BI958492.1|BI958492 HVSMEn0015E21f Hordeum vulgare rachi... 561 e-158
gb|BE193575.3|BE193575 HVSMEh0081M04f Hordeum vulgare 5-45 ... 557 e-157
gb|BU984072.1|BU984072 HA31O14r HA Hordeum vulgare subsp. v... 549 e-154
gb|BE060290.2|BE060290 HVSMEg0011O01f Hordeum vulgare pre-a... 547 e-154
gb|CK124492.1|CK124492 BES1824109f19 BES1824 Hordeum vulgar... 543 e-152
gb|CB883099.1|CB883099 HQ01D05w HQ Hordeum vulgare subsp. v... 541 e-152
gb|BG415200.1|BG415200 HVSMEk0005I13f Hordeum vulgare testa... 533 e-149
gb|BI959550.1|BI959550 HVSMEn0020C12f Hordeum vulgare rachi... 527 e-148
gb|BQ464339.1|BQ464339 HF02A01r HF Hordeum vulgare subsp. v... 525 e-147
gb|BQ472643.1|BQ472643 HB01N19r BC Hordeum vulgare subsp. v... 521 e-146
gb|AW983411.2|AW983411 HVSMEg0010I18f Hordeum vulgare pre-a... 513 e-143
gb|BU972845.1|BU972845 HB22O08r BC Hordeum vulgare subsp. v... 513 e-143
gb|AL506883.1|AL506883 AL506883 Hordeum vulgare Barke devel... 502 e-140
gb|AL510305.1|AL510305 AL510305 Hordeum vulgare Barke devel... 502 e-140
gb|BU974376.1|BU974376 HB27L21r BC Hordeum vulgare subsp. v... 500 e-139
gb|BI960050.1|BI960050 HVSMEn0023A04f Hordeum vulgare rachi... 498 e-139
gb|BU971939.1|BU971939 HB20C02r BC Hordeum vulgare subsp. v... 498 e-139
gb|AL508931.1|AL508931 AL508931 Hordeum vulgare Barke devel... 490 e-136
gb|BU973029.1|BU973029 HB23I05r BC Hordeum vulgare subsp. v... 490 e-136
gb|BI949981.1|BI949981 HVSMEl0017H20f Hordeum vulgare spike... 486 e-135
gb|BI958671.1|BI958671 HVSMEn0016C08f Hordeum vulgare rachi... 486 e-135
gb|BE195797.3|BE195797 HVSMEh0090H19f Hordeum vulgare 5-45 ... 474 e-132
gb|BU989940.1|BU989940 HF23E03r HF Hordeum vulgare subsp. v... 474 e-132
gb|BE194218.3|BE194218 HVSMEh0084K16f Hordeum vulgare 5-45 ... 470 e-130
gb|BQ472946.1|BQ472946 HB01A03r BC Hordeum vulgare subsp. v... 464 e-129
gb|BU979768.1|BU979768 HA17D17r HA Hordeum vulgare subsp. v... 464 e-129
gb|BU981230.1|BU981230 HA23A02r HA Hordeum vulgare subsp. v... 464 e-129
gb|BI950999.1|BI950999 HVSMEl0023P13f Hordeum vulgare spike... 458 e-127
gb|BU969651.1|BU969651 HB12C16r BC Hordeum vulgare subsp. v... 448 e-124
gb|BU985593.1|BU985593 HF08A21r HF Hordeum vulgare subsp. v... 446 e-123
gb|AL508803.1|AL508803 AL508803 Hordeum vulgare Barke devel... 442 e-122
gb|BQ458329.1|BQ458329 HA05I13r HA Hordeum vulgare subsp. v... 436 e-120
gb|AL511145.1|AL511145 AL511145 Hordeum vulgare Barke devel... 430 e-118
gb|AL508759.1|AL508759 AL508759 Hordeum vulgare Barke devel... 426 e-117
gb|AL510358.1|AL510358 AL510358 Hordeum vulgare Barke devel... 426 e-117
gb|BM441123.2|BM441123 EBed02_SQ002_H22_R endosperm, 8 DPA,... 424 e-117
gb|CK124243.1|CK124243 BES1824108b10 BES1824 Hordeum vulgar... 422 e-116
gb|BG416113.2|BG416113 HVSMEk0009N04f Hordeum vulgare testa... 420 e-115
gb|AL506780.1|AL506780 AL506780 Hordeum vulgare Barke devel... 416 e-114
gb|BG417100.2|BG417100 HVSMEk0016D20f Hordeum vulgare testa... 414 e-114
gb|DR421034.1|DR421034 BD14 14 DAF Barley kernel cDNA libra... 410 e-112
gb|BU977902.1|BU977902 HA12D23r HA Hordeum vulgare subsp. v... 406 e-111
gb|BU980045.1|BU980045 HA18G03r HA Hordeum vulgare subsp. v... 406 e-111
gb|BU994091.1|BU994091 HM05L09r HM Hordeum vulgare subsp. v... 406 e-111
gb|CA024190.1|CA024190 HZ48J21r HZ Hordeum vulgare subsp. v... 400 e-109
gb|AL508832.1|AL508832 AL508832 Hordeum vulgare Barke devel... 389 e-106
gb|AL510834.1|AL510834 AL510834 Hordeum vulgare Barke devel... 387 e-105
gb|CV057986.1|CV057986 BNEL33b11 Barley EST endosperm libra... 385 e-105
gb|BI960033.1|BI960033 HVSMEn0022P05f Hordeum vulgare rachi... 379 e-103
gb|BU967777.1|BU967777 HB05F19r BC Hordeum vulgare subsp. v... 377 e-102
gb|BU970962.1|BU970962 HB16D07r BC Hordeum vulgare subsp. v... 373 e-101
gb|BU973917.1|BU973917 HB26G10r BC Hordeum vulgare subsp. v... 371 e-100
gb|AL511239.1|AL511239 AL511239 Hordeum vulgare Barke devel... 369 e-100
gb|AW983288.2|AW983288 HVSMEg0010B12f Hordeum vulgare pre-a... 365 6e-099
gb|BU981301.1|BU981301 HA23D11r HA Hordeum vulgare subsp. v... 361 9e-098
gb|BU970578.1|BU970578 HB15B04r BC Hordeum vulgare subsp. v... 359 4e-097
gb|BI949170.1|BI949170 HVSMEl0012K08f Hordeum vulgare spike... 351 9e-095
gb|AL507418.1|AL507418 AL507418 Hordeum vulgare Barke devel... 347 1e-093
gb|BI950455.1|BI950455 HVSMEl0020M07f Hordeum vulgare spike... 343 2e-092
gb|BM441285.2|BM441285 EBed02_SQ002_O23_R endosperm, 8 DPA,... 343 2e-092
gb|BU972542.1|BU972542 HB21P05r BC Hordeum vulgare subsp. v... 337 1e-090
gb|CV059399.1|CV059399 BNEL47f9 Barley EST endosperm librar... 327 1e-087
gb|BG418363.2|BG418363 HVSMEk0022H07f Hordeum vulgare testa... 325 5e-087
gb|AL509000.1|AL509000 AL509000 Hordeum vulgare Barke devel... 321 8e-086
gb|AL506137.1|AL506137 AL506137 Hordeum vulgare Barke devel... 311 8e-083
gb|BU983397.1|BU983397 HA29J14r HA Hordeum vulgare subsp. v... 309 3e-082
gb|BI949583.1|BI949583 HVSMEl0014M07f Hordeum vulgare spike... 305 5e-081
gb|AL508754.1|AL508754 AL508754 Hordeum vulgare Barke devel... 303 2e-080
gb|BI950098.1|BI950098 HVSMEl0018J22f Hordeum vulgare spike... 303 2e-080
gb|BM441305.2|BM441305 EBed02_SQ002_P21_R endosperm, 8 DPA,... 293 2e-077
gb|BU970467.1|BU970467 HB14L17r BC Hordeum vulgare subsp. v... 293 2e-077
gb|BI957197.1|BI957197 HVSMEn0008B10f Hordeum vulgare rachi... 291 7e-077
gb|BU980323.1|BU980323 HA20F08r HA Hordeum vulgare subsp. v... 291 7e-077
gb|BI950461.1|BI950461 HVSMEl0020M21f Hordeum vulgare spike... 287 1e-075
gb|CV058254.1|CV058254 BNEL36a2 Barley EST endosperm librar... 285 4e-075
gb|CV062655.1|CV062655 BNEL81e12 Barley EST endosperm libra... 285 4e-075
gb|CV063594.1|CV063594 BNEL91a9 Barley EST endosperm librar... 285 4e-075
gb|BI960521.1|BI960521 HVSMEn0024O09f Hordeum vulgare rachi... 283 2e-074
gb|AL508578.1|AL508578 AL508578 Hordeum vulgare Barke devel... 280 3e-073
gb|BI957502.1|BI957502 HVSMEn0009O05f Hordeum vulgare rachi... 280 3e-073
gb|AL511712.1|AL511712 AL511712 Hordeum vulgare Barke devel... 278 1e-072
gb|AL506574.1|AL506574 AL506574 Hordeum vulgare Barke devel... 274 2e-071
gb|CB877767.1|CB877767 HP06B15T HP Hordeum vulgare subsp. v... 272 7e-071
gb|AW982186.2|AW982186 HVSMEg0002C15f Hordeum vulgare pre-a... 266 4e-069
gb|BU967592.1|BU967592 HB04M10r BC Hordeum vulgare subsp. v... 266 4e-069
gb|BU967895.1|BU967895 HB05L07r BC Hordeum vulgare subsp. v... 266 4e-069
gb|BU973170.1|BU973170 HB23P15r BC Hordeum vulgare subsp. v... 266 4e-069
gb|BF624551.2|BF624551 HVSMEa0017B16f Hordeum vulgare seedl... 254 2e-065
gb|AL506937.1|AL506937 AL506937 Hordeum vulgare Barke devel... 250 2e-064
gb|BI947497.1|BI947497 HVSMEl0005K22f Hordeum vulgare spike... 248 1e-063
gb|BG369770.2|BG369770 HVSMEi0025P06f Hordeum vulgare 20 DA... 248 1e-063
gb|BQ754993.1|BQ754993 EBed02_SQ003_G14_R endosperm, 8 DPA,... 248 1e-063
gb|CB877276.1|CB877276 HP04D11T HP Hordeum vulgare subsp. v... 242 6e-062
gb|AU252358.1|AU252358 AU252358 salt-stressed barley root c... 242 6e-062
gb|BU970011.1|BU970011 HB13F10r BC Hordeum vulgare subsp. v... 238 9e-061
gb|BU982148.1|BU982148 HA25K14r HA Hordeum vulgare subsp. v... 238 9e-061
gb|BU996706.1|BU996706 HM14H18r HM Hordeum vulgare subsp. v... 234 1e-059
gb|BQ465231.1|BQ465231 HU03A05r HU Hordeum vulgare subsp. v... 232 6e-059
gb|BQ465351.1|BQ465351 HU03G06r HU Hordeum vulgare subsp. v... 232 6e-059
gb|BU968909.1|BU968909 HB08P07r BC Hordeum vulgare subsp. v... 232 6e-059
gb|BU968013.1|BU968013 HB06C05r BC Hordeum vulgare subsp. v... 228 9e-058
gb|BE194773.3|BE194773 HVSMEh0086N14f Hordeum vulgare 5-45 ... 226 4e-057
gb|BU968143.1|BU968143 HB06J01r BC Hordeum vulgare subsp. v... 226 4e-057
emb|X65871.1|HVSSYNMR H.vulgare mRNA for sucrose synthase 226 4e-057
gb|BI951289.1|BI951289 HVSMEl0025G08f Hordeum vulgare spike... 224 1e-056
gb|BQ465969.1|BQ465969 HT01D06T HT Hordeum vulgare subsp. v... 224 1e-056
gb|BU983395.1|BU983395 HA29J11r HA Hordeum vulgare subsp. v... 222 6e-056
emb|Y15802.1|HVSUCSYN2 Hordeum vulgare Ss2 gene 220 2e-055
gb|BF623914.2|BF623914 HVSMEa0007L05f Hordeum vulgare seedl... 216 3e-054
gb|BM817250.1|BM817250 HC110G04_T3.ab1 HC Hordeum vulgare s... 210 2e-052
gb|CA008668.1|CA008668 HU11L08r HU Hordeum vulgare subsp. v... 210 2e-052
gb|AL507545.1|AL507545 AL507545 Hordeum vulgare Barke devel... 208 8e-052
gb|BU994650.1|BU994650 HM07L22r HM Hordeum vulgare subsp. v... 208 8e-052
gb|CV057477.1|CV057477 BNEL28c6 Barley EST endosperm librar... 206 3e-051
gb|CB880751.1|CB880751 HM07L09w HM Hordeum vulgare subsp. v... 200 2e-049
gb|BM368131.2|BM368131 EBed01_SQ002_E06_R endosperm, 6 DPA,... 196 3e-048
gb|BU977903.1|BU977903 HA12D23u HA Hordeum vulgare subsp. v... 196 3e-048
gb|AV933333.1|AV933333 AV933333 K. Sato unpublished cDNA li... 194 1e-047
gb|AL508508.1|AL508508 AL508508 Hordeum vulgare Barke devel... 192 5e-047
gb|BM440955.2|BM440955 EBed02_SQ002_A03_R endosperm, 8 DPA,... 192 5e-047
gb|BI780819.2|BI780819 EBma05_SQ001_A08_R maternal, 12 DPA,... 192 5e-047
gb|CA014762.1|CA014762 HT12E14r HT Hordeum vulgare subsp. v... 192 5e-047
gb|CV060978.1|CV060978 BNEL63e5 Barley EST endosperm librar... 192 5e-047
gb|CA008002.1|CA008002 HU09J23r HU Hordeum vulgare subsp. v... 190 2e-046
gb|CA012876.1|CA012876 HT06L10r HT Hordeum vulgare subsp. v... 190 2e-046
gb|AL510205.1|AL510205 AL510205 Hordeum vulgare Barke devel... 186 3e-045
gb|BG367760.1|BG367760 HVSMEi0013J01f Hordeum vulgare 20 DA... 182 5e-044
gb|BF261110.2|BF261110 HVSMEf0023M14f Hordeum vulgare seedl... 180 2e-043
gb|BG366469.1|BG366469 HVSMEi0007C17f Hordeum vulgare 20 DA... 180 2e-043
gb|BG418579.1|BG418579 HVSMEk0023E16f Hordeum vulgare testa... 180 2e-043
gb|BG368969.2|BG368969 HVSMEi0021O24f Hordeum vulgare 20 DA... 180 2e-043
gb|BG415538.2|BG415538 HVSMEk0006O07f Hordeum vulgare testa... 180 2e-043
gb|CA011795.1|CA011795 HT03J03r HT Hordeum vulgare subsp. v... 180 2e-043
gb|AL507886.1|AL507886 AL507886 Hordeum vulgare Barke devel... 178 7e-043
gb|AL510640.1|AL510640 AL510640 Hordeum vulgare Barke devel... 178 7e-043
gb|BI953547.1|BI953547 HVSMEm0013C16f Hordeum vulgare green... 178 7e-043
gb|AV922975.1|AV922975 AV922975 K. Sato unpublished cDNA li... 176 3e-042
gb|AV927691.1|AV927691 AV927691 K. Sato unpublished cDNA li... 176 3e-042
gb|AV930471.1|AV930471 AV930471 K. Sato unpublished cDNA li... 176 3e-042
gb|AV930484.1|AV930484 AV930484 K. Sato unpublished cDNA li... 176 3e-042
gb|AV931344.1|AV931344 AV931344 K. Sato unpublished cDNA li... 176 3e-042
gb|AV931842.1|AV931842 AV931842 K. Sato unpublished cDNA li... 176 3e-042
gb|AV932215.1|AV932215 AV932215 K. Sato unpublished cDNA li... 176 3e-042
gb|AV932216.1|AV932216 AV932216 K. Sato unpublished cDNA li... 176 3e-042
gb|AV933009.1|AV933009 AV933009 K. Sato unpublished cDNA li... 176 3e-042
gb|AV933021.1|AV933021 AV933021 K. Sato unpublished cDNA li... 176 3e-042
gb|AV933141.1|AV933141 AV933141 K. Sato unpublished cDNA li... 176 3e-042
gb|AV935055.1|AV935055 AV935055 K. Sato unpublished cDNA li... 176 3e-042
gb|AV935056.1|AV935056 AV935056 K. Sato unpublished cDNA li... 176 3e-042
gb|AV935774.1|AV935774 AV935774 K. Sato unpublished cDNA li... 176 3e-042
gb|AV936274.1|AV936274 AV936274 K. Sato unpublished cDNA li... 176 3e-042
gb|AV936695.1|AV936695 AV936695 K. Sato unpublished cDNA li... 176 3e-042
gb|BJ469105.1|BJ469105 BJ469105 K. Sato unpublished cDNA li... 176 3e-042
gb|BJ471943.1|BJ471943 BJ471943 K. Sato unpublished cDNA li... 176 3e-042
gb|BJ472040.1|BJ472040 BJ472040 K. Sato unpublished cDNA li... 176 3e-042
gb|BJ474322.1|BJ474322 BJ474322 K. Sato unpublished cDNA li... 176 3e-042
gb|BJ476068.1|BJ476068 BJ476068 K. Sato unpublished cDNA li... 176 3e-042
gb|BG369996.2|BG369996 HVSMEi0026N19f Hordeum vulgare 20 DA... 174 1e-041
gb|AL507183.1|AL507183 AL507183 Hordeum vulgare Barke devel... 172 5e-041
gb|AL509749.1|AL509749 AL509749 Hordeum vulgare Barke devel... 172 5e-041
gb|BG416406.1|BG416406 HVSMEk0012B04f Hordeum vulgare testa... 172 5e-041
gb|BG369570.2|BG369570 HVSMEi0024P20f Hordeum vulgare 20 DA... 172 5e-041
gb|BG414977.2|BG414977 HVSMEk0004I09f Hordeum vulgare testa... 172 5e-041
gb|AL502619.1|AL502619 AL502619 Hordeum vulgare Barke roots... 170 2e-040
gb|BG416786.1|BG416786 HVSMEk0014I06f Hordeum vulgare testa... 170 2e-040
gb|AV925331.1|AV925331 AV925331 K. Sato unpublished cDNA li... 170 2e-040
gb|AV930491.1|AV930491 AV930491 K. Sato unpublished cDNA li... 170 2e-040
gb|CV062712.1|CV062712 BNEL82b2 Barley EST endosperm librar... 170 2e-040
gb|AL506754.1|AL506754 AL506754 Hordeum vulgare Barke devel... 168 7e-040
gb|AL506985.1|AL506985 AL506985 Hordeum vulgare Barke devel... 168 7e-040
gb|AL507134.1|AL507134 AL507134 Hordeum vulgare Barke devel... 168 7e-040
gb|AL508179.1|AL508179 AL508179 Hordeum vulgare Barke devel... 168 7e-040
gb|AL508823.1|AL508823 AL508823 Hordeum vulgare Barke devel... 168 7e-040
gb|AL509925.1|AL509925 AL509925 Hordeum vulgare Barke devel... 168 7e-040
gb|AL511708.1|AL511708 AL511708 Hordeum vulgare Barke devel... 168 7e-040
gb|AL512089.1|AL512089 AL512089 Hordeum vulgare Barke devel... 168 7e-040
gb|AJ463139.1|AJ463139 AJ463139 S00002 Hordeum vulgare subs... 168 7e-040
gb|BQ656255.1|BQ656255 HA05C18u HA Hordeum vulgare subsp. v... 168 7e-040
gb|BQ663528.1|BQ663528 HU03A05u HU Hordeum vulgare subsp. v... 168 7e-040
gb|BQ663621.1|BQ663621 HU03G06u HU Hordeum vulgare subsp. v... 168 7e-040
gb|BQ663665.1|BQ663665 HU03I09u HU Hordeum vulgare subsp. v... 168 7e-040
gb|BQ663764.1|BQ663764 HU03P12u HU Hordeum vulgare subsp. v... 168 7e-040
gb|BQ739984.1|BQ739984 HC01H04 HC Hordeum vulgare subsp. vu... 168 7e-040
gb|BI778810.2|BI778810 EBro01_SQ001_J10_R root, 3 week, hyd... 168 7e-040
gb|BM372166.2|BM372166 EBro03_SQ004_D08_R root, 3 week, wat... 168 7e-040
gb|BQ763033.1|BQ763033 EBro02_SQ006_O24_R root, 3 week, hyd... 168 7e-040
gb|BQ763039.1|BQ763039 EBro02_SQ006_P24_R root, 3 week, hyd... 168 7e-040
gb|BQ765282.1|BQ765282 EBro03_SQ006_A19_R root, 3 week, wat... 168 7e-040
gb|BQ765987.1|BQ765987 EBro03_SQ008_P18_R root, 3 week, wat... 168 7e-040
gb|BQ766074.1|BQ766074 EBro03_SQ008_P22_R root, 3 week, wat... 168 7e-040
gb|BU967663.1|BU967663 HB05A08r BC Hordeum vulgare subsp. v... 168 7e-040
gb|BU967723.1|BU967723 HB05D07r BC Hordeum vulgare subsp. v... 168 7e-040
gb|BU968075.1|BU968075 HB06F12r BC Hordeum vulgare subsp. v... 168 7e-040
gb|BU968978.1|BU968978 HB10C15r BC Hordeum vulgare subsp. v... 168 7e-040
gb|BU975831.1|BU975831 HB32G24r BC Hordeum vulgare subsp. v... 168 7e-040
gb|BU983536.1|BU983536 HA30B06r HA Hordeum vulgare subsp. v... 168 7e-040
gb|BU986345.1|BU986345 HF11H21r HF Hordeum vulgare subsp. v... 168 7e-040
gb|BU988196.1|BU988196 HF16O23r HF Hordeum vulgare subsp. v... 168 7e-040
gb|CA000573.1|CA000573 HS08B05u HS Hordeum vulgare subsp. v... 168 7e-040
gb|CA005735.1|CA005735 HU08N06u HU Hordeum vulgare subsp. v... 168 7e-040
gb|CA010000.1|CA010000 HT12E14u HT Hordeum vulgare subsp. v... 168 7e-040
gb|CA011241.1|CA011241 HT06L10u HT Hordeum vulgare subsp. v... 168 7e-040
gb|CA014591.1|CA014591 HT11M11r HT Hordeum vulgare subsp. v... 168 7e-040
gb|CB875605.1|CB875605 HX08M24w HX Hordeum vulgare subsp. v... 168 7e-040
gb|CB878688.1|CB878688 HP09H14T HP Hordeum vulgare subsp. v... 168 7e-040
gb|CB880044.1|CB880044 HM05F03w HM Hordeum vulgare subsp. v... 168 7e-040
gb|CK125339.1|CK125339 BES1824107l18 BES1824 Hordeum vulgar... 168 7e-040
gb|CK125495.1|CK125495 BES1824108m09 BES1824 Hordeum vulgar... 168 7e-040
gb|AL507174.1|AL507174 AL507174 Hordeum vulgare Barke devel... 165 1e-038
gb|AL507949.1|AL507949 AL507949 Hordeum vulgare Barke devel... 165 1e-038
gb|AL511569.1|AL511569 AL511569 Hordeum vulgare Barke devel... 165 1e-038
gb|BI956220.1|BI956220 HVSMEn0001D19f Hordeum vulgare rachi... 165 1e-038
gb|BQ470019.1|BQ470019 HX01I13T HX Hordeum vulgare subsp. v... 165 1e-038
gb|BQ762441.1|BQ762441 EBro01_SQ005_I21 _R root, 3 week, hy... 165 1e-038
gb|CB882795.1|CB882795 HL02N21w HL Hordeum vulgare subsp. v... 165 1e-038
gb|CK123581.1|CK123581 BES1824104i15 BES1824 Hordeum vulgar... 165 1e-038
gb|CK123919.1|CK123919 BES1824106c09 BES1824 Hordeum vulgar... 165 1e-038
gb|AL510755.1|AL510755 AL510755 Hordeum vulgare Barke devel... 163 4e-038
gb|BI947490.1|BI947490 HVSMEl0005K12f Hordeum vulgare spike... 163 4e-038
gb|BI949474.1|BI949474 HVSMEl0014B17f Hordeum vulgare spike... 163 4e-038
gb|AV925338.1|AV925338 AV925338 K. Sato unpublished cDNA li... 163 4e-038
gb|AV934022.1|AV934022 AV934022 K. Sato unpublished cDNA li... 163 4e-038
gb|BQ458449.1|BQ458449 HA05C18r HA Hordeum vulgare subsp. v... 163 4e-038
gb|BU984717.1|BU984717 HF04M17r HF Hordeum vulgare subsp. v... 163 4e-038
gb|CA032999.1|CA032999 HX14N04r HX Hordeum vulgare subsp. v... 163 4e-038
gb|AL508505.1|AL508505 AL508505 Hordeum vulgare Barke devel... 161 2e-037
gb|BG365276.1|BG365276 HVSMEi0002B22f Hordeum vulgare 20 DA... 161 2e-037
gb|BG418826.1|BG418826 HVSMEk0024K01f Hordeum vulgare testa... 161 2e-037
gb|BI958579.1|BI958579 HVSMEn0015L19f Hordeum vulgare rachi... 161 2e-037
gb|BU972703.1|BU972703 HB22H15r BC Hordeum vulgare subsp. v... 161 2e-037
gb|CA007711.1|CA007711 HU08N06r HU Hordeum vulgare subsp. v... 161 2e-037
gb|CA009422.1|CA009422 HU14B07r HU Hordeum vulgare subsp. v... 161 2e-037
gb|CA021250.1|CA021250 HZ39I21r HZ Hordeum vulgare subsp. v... 161 2e-037
gb|CB877551.1|CB877551 HP05F11T HP Hordeum vulgare subsp. v... 159 7e-037
gb|AL508575.1|AL508575 AL508575 Hordeum vulgare Barke devel... 157 3e-036
gb|AL509343.1|AL509343 AL509343 Hordeum vulgare Barke devel... 157 3e-036
gb|BI947100.1|BI947100 HVSMEl0003K20f Hordeum vulgare spike... 157 3e-036
gb|CA007362.1|CA007362 HU07L06r HU Hordeum vulgare subsp. v... 157 3e-036
gb|CA007705.1|CA007705 HU08M22r HU Hordeum vulgare subsp. v... 157 3e-036
gb|CA029890.1|CA029890 HX05I01r HX Hordeum vulgare subsp. v... 157 3e-036
gb|CA031028.1|CA031028 HX08M24r HX Hordeum vulgare subsp. v... 157 3e-036
gb|AL511205.1|AL511205 AL511205 Hordeum vulgare Barke devel... 155 1e-035
gb|AL511948.1|AL511948 AL511948 Hordeum vulgare Barke devel... 155 1e-035
gb|BI948982.1|BI948982 HVSMEl0011M16f Hordeum vulgare spike... 155 1e-035
gb|AV927008.1|AV927008 AV927008 K. Sato unpublished cDNA li... 155 1e-035
gb|BQ465085.1|BQ465085 HU02J18r HU Hordeum vulgare subsp. v... 155 1e-035
gb|AL510404.1|AL510404 AL510404 Hordeum vulgare Barke devel... 153 4e-035
gb|BI956349.1|BI956349 HVSMEn0002L14f Hordeum vulgare rachi... 153 4e-035
gb|AW982986.3|AW982986 HVSMEg0004L20f Hordeum vulgare pre-a... 153 4e-035
gb|BG415984.2|BG415984 HVSMEk0009F01f Hordeum vulgare testa... 153 4e-035
gb|AL511119.1|AL511119 AL511119 Hordeum vulgare Barke devel... 151 2e-034
gb|BG415831.1|BG415831 HVSMEk0007P05f Hordeum vulgare testa... 151 2e-034
gb|AL508992.1|AL508992 AL508992 Hordeum vulgare Barke devel... 149 7e-034
gb|BE602450.2|BE602450 HVSMEh0098P06f Hordeum vulgare 5-45 ... 149 7e-034
gb|AV925318.1|AV925318 AV925318 K. Sato unpublished cDNA li... 149 7e-034
gb|BU994515.1|BU994515 HM07F03r HM Hordeum vulgare subsp. v... 149 7e-034
gb|CA008009.1|CA008009 HU09K06r HU Hordeum vulgare subsp. v... 149 7e-034
gb|BF260921.2|BF260921 HVSMEf0023E17f Hordeum vulgare seedl... 147 3e-033
gb|BI950744.1|BI950744 HVSMEl0023A20f Hordeum vulgare spike... 147 3e-033
gb|BG414847.1|BG414847 HVSMEk0003P09f Hordeum vulgare testa... 147 3e-033
gb|BU975527.1|BU975527 HB31H01r BC Hordeum vulgare subsp. v... 147 3e-033
gb|AL509551.1|AL509551 AL509551 Hordeum vulgare Barke devel... 145 1e-032
gb|AL510179.1|AL510179 AL510179 Hordeum vulgare Barke devel... 145 1e-032
gb|AL511771.1|AL511771 AL511771 Hordeum vulgare Barke devel... 145 1e-032
gb|BI947652.1|BI947652 HVSMEl0006E15f Hordeum vulgare spike... 145 1e-032
gb|AL506015.1|AL506015 AL506015 Hordeum vulgare Barke devel... 143 4e-032
gb|BE230866.2|BE230866 HVSMEg0001A18f Hordeum vulgare pre-a... 143 4e-032
gb|BG414333.2|BG414333 HVSMEk0001I07f Hordeum vulgare testa... 143 4e-032
gb|BU969903.1|BU969903 HB12P21r BC Hordeum vulgare subsp. v... 143 4e-032
gb|AL508229.1|AL508229 AL508229 Hordeum vulgare Barke devel... 141 2e-031
gb|BM441561.2|BM441561 EBma05_SQ004_N13_R maternal, 12 DPA,... 141 2e-031
gb|BU970650.1|BU970650 HB15E14r BC Hordeum vulgare subsp. v... 141 2e-031
gb|BU970742.1|BU970742 HB15I19r BC Hordeum vulgare subsp. v... 141 2e-031
gb|CA008161.1|CA008161 HU10B06r HU Hordeum vulgare subsp. v... 141 2e-031
gb|CA025542.1|CA025542 HZ52H08r HZ Hordeum vulgare subsp. v... 141 2e-031
gb|AW983276.2|AW983276 HVSMEg0010A24f Hordeum vulgare pre-a... 137 3e-030
gb|BG417785.1|BG417785 HVSMEk0019I06f Hordeum vulgare testa... 137 3e-030
gb|AL506857.1|AL506857 AL506857 Hordeum vulgare Barke devel... 135 1e-029
gb|AL508072.1|AL508072 AL508072 Hordeum vulgare Barke devel... 135 1e-029
gb|BF620996.3|BF620996 HVSMEa0003J12f Hordeum vulgare seedl... 135 1e-029
gb|BI957022.1|BI957022 HVSMEn0007A12f Hordeum vulgare rachi... 135 1e-029
gb|BG415456.2|BG415456 HVSMEk0006I23f Hordeum vulgare testa... 135 1e-029
gb|BQ765365.1|BQ765365 EBro03_SQ006_P20_R root, 3 week, wat... 135 1e-029
gb|CA005161.1|CA005161 HU11L08u HU Hordeum vulgare subsp. v... 135 1e-029
gb|CV060973.1|CV060973 BNEL63e10 Barley EST endosperm libra... 135 1e-029
gb|AL510279.1|AL510279 AL510279 Hordeum vulgare Barke devel... 133 4e-029
gb|AL512052.1|AL512052 AL512052 Hordeum vulgare Barke devel... 133 4e-029
gb|BQ470061.1|BQ470061 HX01K13T HX Hordeum vulgare subsp. v... 133 4e-029
gb|CB882455.1|CB882455 HL01O14w HL Hordeum vulgare subsp. v... 133 4e-029
gb|CB883301.1|CB883301 HQ01M24w HQ Hordeum vulgare subsp. v... 133 4e-029
gb|AL506695.1|AL506695 AL506695 Hordeum vulgare Barke devel... 131 2e-028
gb|AL507987.1|AL507987 AL507987 Hordeum vulgare Barke devel... 131 2e-028
gb|BQ657656.1|BQ657656 HA07I08u HA Hordeum vulgare subsp. v... 131 2e-028
gb|BQ657862.1|BQ657862 HA06K19u HA Hordeum vulgare subsp. v... 131 2e-028
gb|BU999704.1|BU999704 HI15G24r HI Hordeum vulgare subsp. v... 131 2e-028
gb|CA003640.1|CA003640 HS15B20r HS Hordeum vulgare subsp. v... 131 2e-028
gb|CA020993.1|CA020993 HZ38L09r HZ Hordeum vulgare subsp. v... 131 2e-028
gb|BF623570.2|BF623570 HVSMEa0002N04f Hordeum vulgare seedl... 129 6e-028
gb|BJ475342.1|BJ475342 BJ475342 K. Sato unpublished cDNA li... 129 6e-028
gb|BU966819.1|BU966819 HB02H08r BC Hordeum vulgare subsp. v... 129 6e-028
gb|AL510362.1|AL510362 AL510362 Hordeum vulgare Barke devel... 127 2e-027
gb|BQ472098.1|BQ472098 HV04G13r HV Hordeum vulgare subsp. v... 127 2e-027
gb|BQ754492.1|BQ754492 EBed01_SQ001_L16_R endosperm, 6 DPA,... 127 2e-027
gb|CA006778.1|CA006778 HU05K21r HU Hordeum vulgare subsp. v... 127 2e-027
gb|CA027988.1|CA027988 HZ60K10r HZ Hordeum vulgare subsp. v... 127 2e-027
gb|BF625889.2|BF625889 HVSMEa0014B01f Hordeum vulgare seedl... 125 1e-026
gb|BF254244.2|BF254244 HVSMEf0003G21f Hordeum vulgare seedl... 125 1e-026
gb|AV933030.1|AV933030 AV933030 K. Sato unpublished cDNA li... 125 1e-026
gb|BU969936.1|BU969936 HB13B14r BC Hordeum vulgare subsp. v... 123 4e-026
gb|BU973282.1|BU973282 HB24G11r BC Hordeum vulgare subsp. v... 123 4e-026
gb|BI957023.1|BI957023 HVSMEn0007A14f Hordeum vulgare rachi... 119 6e-025
gb|BG367939.2|BG367939 HVSMEi0014N22f Hordeum vulgare 20 DA... 119 6e-025
gb|BG365980.1|BG365980 HVSMEi0005J20f Hordeum vulgare 20 DA... 117 2e-024
gb|CA032527.1|CA032527 HX13E21r HX Hordeum vulgare subsp. v... 117 2e-024
gb|BG343832.1|BG343832 HVSMEg0006N24f Hordeum vulgare pre-a... 115 9e-024
gb|CA000310.1|CA000310 HS08P20u HS Hordeum vulgare subsp. v... 115 9e-024
gb|CA001063.1|CA001063 HS05J24u HS Hordeum vulgare subsp. v... 115 9e-024
gb|AL511249.1|AL511249 AL511249 Hordeum vulgare Barke devel... 113 4e-023
gb|CA012429.1|CA012429 HT05G13r HT Hordeum vulgare subsp. v... 113 4e-023
gb|BG415034.1|BG415034 HVSMEk0004M12f Hordeum vulgare testa... 111 1e-022
gb|AU252359.1|AU252359 AU252359 salt-stressed barley root c... 111 1e-022
gb|AL505996.1|AL505996 AL505996 Hordeum vulgare Barke devel... 109 6e-022
gb|BG369184.1|BG369184 HVSMEi0023A09f Hordeum vulgare 20 DA... 109 6e-022
gb|BI954759.1|BI954759 HVSMEm0019K05f Hordeum vulgare green... 109 6e-022
gb|BF264222.3|BF264222 HV_CEa0008N14f Hordeum vulgare seedl... 109 6e-022
gb|CA001197.1|CA001197 HS05A10u HS Hordeum vulgare subsp. v... 109 6e-022
gb|CV062604.1|CV062604 BNEL80h3 Barley EST endosperm librar... 109 6e-022
gb|AL509294.1|AL509294 AL509294 Hordeum vulgare Barke devel... 107 2e-021
gb|AU252357.1|AU252357 AU252357 salt-stressed barley root c... 107 2e-021
gb|CB878015.1|CB878015 HP07A19T HP Hordeum vulgare subsp. v... 105 9e-021
gb|AL505351.1|AL505351 AL505351 Hordeum vulgare Barke roots... 103 4e-020
gb|AL511324.1|AL511324 AL511324 Hordeum vulgare Barke devel... 103 4e-020
gb|AL511782.1|AL511782 AL511782 Hordeum vulgare Barke devel... 103 4e-020
gb|CA027932.1|CA027932 HZ60H16r HZ Hordeum vulgare subsp. v... 103 4e-020
gb|AL508158.1|AL508158 AL508158 Hordeum vulgare Barke devel... 101 1e-019
gb|BE195904.3|BE195904 HVSMEh0090N12f Hordeum vulgare 5-45 ... 101 1e-019
gb|BG368222.2|BG368222 HVSMEi0016L23f Hordeum vulgare 20 DA... 101 1e-019
gb|BQ664983.1|BQ664983 HX01K13w HX Hordeum vulgare subsp. v... 100 6e-019
gb|BI949593.1|BI949593 HVSMEl0014M21f Hordeum vulgare spike... 98 2e-018
gb|AL508920.1|AL508920 AL508920 Hordeum vulgare Barke devel... 96 9e-018
gb|BG368955.1|BG368955 HVSMEi0021I07f Hordeum vulgare 20 DA... 96 9e-018
gb|BI953769.1|BI953769 HVSMEm0014E22f Hordeum vulgare green... 96 9e-018
gb|BM376838.1|BM376838 EBem05_SQ003_G02_R embryo, 14 DPA, n... 96 9e-018
gb|AV926460.1|AV926460 AV926460 K. Sato unpublished cDNA li... 94 3e-017
gb|DR421033.1|DR421033 BC41 14 DAF Barley kernel cDNA libra... 94 3e-017
gb|BG415295.2|BG415295 HVSMEk0005O15f Hordeum vulgare testa... 92 1e-016
gb|BI947099.1|BI947099 HVSMEl0003K18f Hordeum vulgare spike... 86 8e-015
gb|CA028687.1|CA028687 HZ62O19r HZ Hordeum vulgare subsp. v... 84 3e-014
gb|BF624833.2|BF624833 HVSMEa0017N22f Hordeum vulgare seedl... 80 5e-013
gb|BG415179.2|BG415179 HVSMEk0005H08f Hordeum vulgare testa... 78 2e-012
gb|BJ470541.1|BJ470541 BJ470541 K. Sato unpublished cDNA li... 78 2e-012
gb|CA002951.1|CA002951 HS08P20r HS Hordeum vulgare subsp. v... 78 2e-012
gb|AL512043.1|AL512043 AL512043 Hordeum vulgare Barke devel... 76 8e-012
gb|BE060320.2|BE060320 HVSMEg0011P14f Hordeum vulgare pre-a... 76 8e-012
gb|BU971201.1|BU971201 HB16O14r BC Hordeum vulgare subsp. v... 76 8e-012
gb|BG416850.1|BG416850 HVSMEk0014N09f Hordeum vulgare testa... 72 1e-010
gb|L43955.1|BLYAG Hordeum vulgare (clone ABC465) STS mRNA, ... 72 1e-010
gb|AL508597.1|AL508597 AL508597 Hordeum vulgare Barke devel... 70 5e-010
gb|BG300584.1|BG300584 HVSMEb0017J12f Hordeum vulgare seedl... 70 5e-010
gb|BE601681.2|BE601681 HVSMEh0099C17f Hordeum vulgare 5-45 ... 70 5e-010
gb|BE603182.2|BE603182 HVSMEh0102F23f Hordeum vulgare 5-45 ... 70 5e-010
gb|BI948909.1|BI948909 HVSMEl0011G10f Hordeum vulgare spike... 70 5e-010
gb|AW983156.3|AW983156 HVSMEg0008G21f Hordeum vulgare pre-a... 70 5e-010
gb|BE601808.3|BE601808 HVSMEh0099K01f Hordeum vulgare 5-45 ... 70 5e-010
gb|BG369079.2|BG369079 HVSMEi0021K08f Hordeum vulgare 20 DA... 70 5e-010
gb|BG369517.2|BG369517 HVSMEi0024L16f Hordeum vulgare 20 DA... 70 5e-010
gb|BM377519.1|BM377519 EBem04_SQ003_G04_R embryo, 12 DPA, n... 70 5e-010
gb|BQ657205.1|BQ657205 HA09E08u HA Hordeum vulgare subsp. v... 70 5e-010
gb|BU983646.1|BU983646 HA30H08r HA Hordeum vulgare subsp. v... 70 5e-010
gb|CA003333.1|CA003333 HS14B14r HS Hordeum vulgare subsp. v... 70 5e-010
gb|CA032338.1|CA032338 HX12L14r HX Hordeum vulgare subsp. v... 70 5e-010
gb|CA013386.1|CA013386 HT08E14r HT Hordeum vulgare subsp. v... 68 2e-009
gb|BQ465545.1|BQ465545 HU03P12r HU Hordeum vulgare subsp. v... 64 3e-008
gb|CA001597.1|CA001597 HS05A10r HS Hordeum vulgare subsp. v... 64 3e-008
gb|CA002628.1|CA002628 HS08B05r HS Hordeum vulgare subsp. v... 64 3e-008
gb|CA011672.1|CA011672 HT03D16r HT Hordeum vulgare subsp. v... 64 3e-008
gb|BQ658146.1|BQ658146 HA05I13u HA Hordeum vulgare subsp. v... 62 1e-007
gb|BI777296.2|BI777296 EBro03_SQ002_M11_R root, 3 week, wat... 62 1e-007
gb|BJ464820.1|BJ464820 BJ464820 K. Sato unpublished cDNA li... 60 5e-007
gb|AL511949.1|AL511949 AL511949 Hordeum vulgare Barke devel... 58 2e-006
gb|CA003480.1|CA003480 HS14J17r HS Hordeum vulgare subsp. v... 56 7e-006
gb|BG365466.1|BG365466 HVSMEi0002M17f Hordeum vulgare 20 DA... 54 3e-005
gb|BE196617.3|BE196617 HVSMEh0092M19f Hordeum vulgare 5-45 ... 54 3e-005
gb|BI948042.1|BI948042 HVSMEl0007P16f Hordeum vulgare spike... 48 0.002
gb|CA012099.1|CA012099 HT04H03r HT Hordeum vulgare subsp. v... 48 0.002
gb|BU985429.1|BU985429 HF07C20r HF Hordeum vulgare subsp. v... 46 0.007
gb|BQ471869.1|BQ471869 HV03L17r HV Hordeum vulgare subsp. v... 42 0.11
emb|X73221.1|HVSS1 H.vulgare Ss1 gene for sucrose synthase 42 0.11
gb|AV836248.1|AV836248 AV836248 K. Sato unpublished cDNA li... 40 0.44
gb|AV914251.1|AV914251 AV914251 K. Sato unpublished cDNA li... 40 0.44
gb|BM442027.2|BM442027 EBan01_SQ001_O01_R anther, yellow st... 40 0.44
gb|BQ753417.1|BQ753417 EBan01_SQ004_D11_R anther, yellow st... 40 0.44
gb|BQ753501.1|BQ753501 EBan01_SQ004_H04_R anther, yellow st... 40 0.44
gb|BQ764161.1|BQ764161 EBan01_SQ005_D06 _R anther, yellow s... 40 0.44
gb|BU994823.1|BU994823 HM08F06r HM Hordeum vulgare subsp. v... 40 0.44
gb|CB880951.1|CB880951 HM08F06w HM Hordeum vulgare subsp. v... 40 0.44
gb|AH014393.1|SEG_AY643842S Hordeum vulgare subsp. vulgare ... 40 0.44
gb|AY643843.1|AY643842S2 Hordeum vulgare subsp. vulgare clo... 40 0.44
>emb|X69931.1|HVRNASS H.vulgare mRNA for sucrose synthase
Length = 2708
Score = 1737 bits (876), Expect = 0.0
Identities = 2030/2412 (84%), Gaps = 2/2412 (0%)
Strand = Plus / Minus
Query: 579 tgcggtacttgagcgcgtacagcatctccaggtaccgccgggtctcgcgcctctccaggt 638
||||||||||||| || || ||||| || ||||| || || ||||||||||| || ||||
Sbjct: 2411 tgcggtacttgagggcatagagcatttcaaggtagcgacgagtctcgcgcctgtcgaggt 2352
Query: 639 tggacacgtacttccagaacccgtacacgccggtgagggtcatcagcctctccgagtaca 698
|||| |||||||||||||| || || || || | ||||||||||||||||| |||||||
Sbjct: 2351 tggagacgtacttccagaaaccatagacaccagaaagggtcatcagcctctcagagtaca 2292
Query: 699 gcttccaggtgtacttctcctcgatacgctggagcccgccctgggagatcttgctccagt 758
|||||||||||||||||||||| || |||||||| || ||||| ||||||||| ||||||
Sbjct: 2291 gcttccaggtgtacttctcctcaatgcgctggagtcctccctgtgagatcttgttccagt 2232
Query: 759 ggctcggctccgcctggcacttgtcgaagaagtccacgagcagggccgacgccttgtcgc 818
||||||| || | |||||||| | |||||| |||| ||||| || || ||||||||
Sbjct: 2231 ggctcgggtcttcttggcacttcccaaagaagcccacaagcagtgcggaggccttgtcat 2172
Query: 819 cctggtaagggtcgatgtggtagccagacacgccgtgcacgatgatctcggccggaccgc 878
||| ||||| |||||||||||||| ||||| || | ||| |||||||| || ||||| |
Sbjct: 2171 tctgataaggatcgatgtggtagccggacacaccattcacaatgatctcagctggaccac 2112
Query: 879 cgtaggctgtggcaaacgtgggcaggccgcaggtcatggcctcaaccaccgtcagcccga 938
|||| || ||||| || || || || || || ||||||||||| | ||| || || ||||
Sbjct: 2111 cgtatgcagtggcgaatgttggaagaccacatgtcatggcctctatcactgtaagaccga 2052
Query: 939 aagcctcgtagaaagcaggctgcacgaaggcgcccttggtgtcgcagatgtagcggtaca 998
||||||| ||||||||||||||||| ||||| ||||| |||| |||||||||||||| |
Sbjct: 2051 aagcctcatagaaagcaggctgcacaaaggctcccttcatgtcacagatgtagcggtaga 1992
Query: 999 gctcgccgttgcggacgcggttcatctgggcggagatccagcggatgtgcccgttcaggt 1058
|||| ||||||||||||||||||||||| || ||||||||||||||||| || ||||||
Sbjct: 1991 gctcaccgttgcggacgcggttcatctgagcagagatccagcggatgtgaccactcaggt 1932
Query: 1059 tgtactgctcgatgaggtcaaacatcttcttgaactcggcctgctcctccttgtccttgg 1118
|||||| || || || |||||||||||||||||||| | |||||||||||||||||||
Sbjct: 1931 tgtacttttctataagatcaaacatcttcttgaactctacttgctcctccttgtccttgg 1872
Query: 1119 aagggttgccatggtcgccgcagacgaccacgaggttcaccagctcctgcagccgcttgt 1178
| || |||||||| || ||||| ||||| ||||| ||||||||||| || || |
Sbjct: 1871 acacctttccatggtcaccacagacaaccaccaggtttaccagctcctgtaggcgaggat 1812
Query: 1179 tccggccgtacagctccaccagcccagtcaagttcttcacacggtcgagacgagccatgg 1238
|||| || |||| || ||||| ||||||| ||||| |||||||| || | |||||| |
Sbjct: 1811 tccgcccatacatttctaccaggccagtcatattcttgacacggtccagcctagccatcg 1752
Query: 1239 agaagatgattggcttgttcctgtcgttcagaacgaacttgtgctccgtgttctcggttt 1298
|||||||||| ||||| ||| |||| |||| || || |||||||| | ||||| |
Sbjct: 1751 agaagatgatcggcttcttcttgtccttcaacacaaatttgtgctcagcattctcaacat 1692
Query: 1299 ggctgtacaggagctcctcaatctccgggtgaagggaggtcagcctcttgtgcgactcgg 1358
||| | || |||||||||||||| | || |||||||| |||||||| ||| || |
Sbjct: 1691 cactgaatagtagctcctcaatctcagtatggagggaggtaagcctcttctgctgttcag 1632
Query: 1359 tgtacgggaagtagatggacaggtccgcgccaggagacacgatgttgaacttggggtcga 1418
|||| |||||||||||||||| ||| || |||||||||||||||||||||||||||||||
Sbjct: 1631 tgtatgggaagtagatggacatgtcagcaccaggagacacgatgttgaacttggggtcga 1572
Query: 1419 acacatcaatgccgtggacaacgcggtacaggccaggcattgtgaacgccatgtgtgact 1478
| ||||| || || |||||||| || || ||||| ||||||||||| |||||||| ||||
Sbjct: 1571 agacatcgataccatggacaacacgatagaggcctggcattgtgaatgccatgtgcgact 1512
Query: 1479 cgtactggccgacggtgtccttgtttccggcgatctcttggaaggtactggtgatgatga 1538
||||||| || |||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1511 cgtactgccctacggtgtccttgtttccggcaatctcttggaaggtactggtgatgatga 1452
Query: 1539 agtcggcatggttcattgcaatcaagtcagtggtgaactggcacgagaagtggtagtgat 1598
|||| ||||||||||||||||||| ||| | |||||||||||| ||||||||||||||||
Sbjct: 1451 agtcagcatggttcattgcaatcaggtcggcggtgaactggcatgagaagtggtagtgat 1392
Query: 1599 cctcaaacttcttccagtagaggtcggagttagggtacttagttttctcaagcgcatggg 1658
||||||| ||||||||||| |||||||| || || ||||| |||||||| |||||||| |
Sbjct: 1391 cctcaaatttcttccagtaaaggtcggaattgggatacttggttttctcgagcgcatgag 1332
Query: 1659 caatggtacagtgagtaacacccatcttgtgggcgagcaaacacgcaacaaggtttccgt 1718
|||||||||| |||||||| |||| |||||| || | ||||||||| |||||||| ||||
Sbjct: 1331 caatggtacaatgagtaactcccaacttgtgtgccaacaaacacgcgacaaggttaccgt 1272
Query: 1719 cactgtagtttccgatgatcaggtcaggattggcctgaagctctccagcaatctcatgcg 1778
||||||||||||| |||||||||||||| |||||||| |||||||| || |||||||| |
Sbjct: 1271 cactgtagtttccaatgatcaggtcagggttggcctgcagctctccggcgatctcatgtg 1212
Query: 1779 ccacgtcatcagtgtaagtctccaggtacggccagacttcaaatcgcgagatccacttgc 1838
|||| ||||| ||||||| |||||||| |||||||||||||| || |||||||| || |
Sbjct: 1211 ccacatcatcggtgtaagcttccaggtaaggccagacttcaaaacgggagatccatttcc 1152
Query: 1839 gaacgattccgttttctgttctgaatggcacgcgaaggatatggcagtgctcggtgccaa 1898
|||| || || | ||||||| |||||||||| || ||||| ||| ||||||||||||||
Sbjct: 1151 gaacaataccatcttctgttttgaatggcacacgcaggatgtgggtgtgctcggtgccaa 1092
Query: 1899 ggaccttctcaaggcgctggccacaggtggtgccagttgcatcagggagcaacctggtga 1958
||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||
Sbjct: 1091 ggaccttctcaaggcgctggccacaggtggtgccatgtgcatcagggagcatcctggtga 1032
Query: 1959 caataaggatcttcggcgtgatgtcaagaccacactgcttgatcctcagcagcatttcgt 2018
| || || ||||| || || ||||| ||||| ||||||||| |||| |||||| || |
Sbjct: 1031 ctattagaatctttggagtaatgtcgagaccttgctgcttgattctcaacagcatctcat 972
Query: 2019 tctccatagcgcgcacttgatccaagatgtagacaacctggcctccggtgtcagggtaac 2078
| |||||||| || ||||| ||||| |||||||||||||| || || || |||||||| |
Sbjct: 971 tttccatagcacggacttggtccaaaatgtagacaacctgtccgccagtatcagggtacc 912
Query: 2079 ccaagacattagcttgagcgaagtaaccatgaggggagaggataacgacattgaacacca 2138
|||||||||| || |||||||||||||||||||| ||||||||||| ||||||| |||||
Sbjct: 911 ccaagacattggcctgagcgaagtaaccatgaggagagaggataacaacattgagcacca 852
Query: 2139 tggggatcgttccaaggaacttctccagggtggacggatctggggcctccaggaggtcca 2198
| ||||| ||||| ||||||||||||| || ||| ||||| |||||||| || |||||||
Sbjct: 851 ttgggattgttccgaggaacttctccaaggaggatggatcaggggcctcgagaaggtcca 792
Query: 2199 agaggaggtggatagtctcctgtgcacgcttagcgcaatcaccccaacccttctccagac 2258
|||| |||||||||||||| ||||||| ||| || || ||||| || ||||||| ||
Sbjct: 791 agagaaggtggatagtctcgctcgcacgctgagcacagtcgccccagcctttctccaaac 732
Query: 2259 caagttcctggaacctgtggtgaaattcagagtatggggtatcagcttgtagggtggaca 2318
||||||||||||||| |||||| || || | ||| ||||| |||||| | ||| ||||
Sbjct: 731 caagttcctggaaccggtggtggaactcggtgtaaggggtgtcagctggaaggcctgaca 672
Query: 2319 ggtgctcctcagccttcctcagcgcaccttgcagagcactgagactgcggattctgtcgt 2378
| || ||| |||||||| || |||||||| || | || ||||||||| |||||||| |
Sbjct: 671 gatgtgtctctgccttcctgagtgcaccttggagggtaccgagactgcgaattctgtcat 612
Query: 2379 tcaacatcatggtcatccccttgtagttgtgggcgcgaaggaagttgagcaaggggtaca 2438
||| ||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||
Sbjct: 611 tcagcatcatggtcatccccttgtagttgtgcgcgcgaaggaagttaagcaatgggtaca 552
Query: 2439 tgctctccttgtcatggaagagctttgatgacaggtgcctgttgaggaactgcacgccat 2498
|||||||||| |||||||| ||||| || |||| ||||||||| || |||||||| || |
Sbjct: 551 tgctctccttatcatggaacagcttcgacgacaagtgcctgttcagaaactgcacaccgt 492
Query: 2499 tgccaatggactttgacagagaaggacgggggaaggaggcattgaatggctcaaagtcca 2558
||||||||||||| ||||| || || || ||||||||||| ||||||||| |||||||||
Sbjct: 491 tgccaatggacttcgacagcgatgggcgtgggaaggaggcgttgaatggcccaaagtcca 432
Query: 2559 gctcaagaacaaagttgttgttggggccttcttccacaagctgttccttgaactgcaggt 2618
||||||| ||||||||||| | || || | | | | | || ||||||||||||||||| |
Sbjct: 431 gctcaagcacaaagttgttatcggtgcttccattcgccagttgttccttgaactgcagat 372
Query: 2619 a-ctcaggaactctcagctcctcaacagcgagctcactgacgttgaccctcacatactcc 2677
| |||||| || || | |||||||||| | ||||| || || ||||||||||||||||||
Sbjct: 371 acctcagg-acgcttaactcctcaacaccaagctcgctcacattgaccctcacatactcc 313
Query: 2678 cagacaccaggcctagggcggatggcaagtgcaacccatggggggatgacaatcgcctcc 2737
||||| |||||||| || |||||||| || ||||||||||| ||||||||||| ||||||
Sbjct: 312 cagacgccaggccttggccggatggcgagagcaacccatggagggatgacaattgcctcc 253
Query: 2738 tgagctgccctcaggacatcctcaaaagcaccatccttgagcttctcgcgctcagcctca 2797
|| || |||| |||| ||||||||| | | ||| |||||||||||||| ||||||
Sbjct: 252 tgtgcgccccttaggagatcctcaaagggggtgttcttcagcttctcgcgctctgcctca 193
Query: 2798 gggatcgcattgttgtactcggcaatgatctggtggggctgcagcataccctttccaagg 2857
|||||||| |||||||| ||| ||||||| |||||||||||||| |||||||| ||
Sbjct: 192 gggatcgcggcattgtactcagcagtgatctgatggggctgcagcatcccctttccttgg 133
Query: 2858 tttttcagcctggtgaagacggcgacaagctcattggggtgggcagagagtgagtcgcca 2917
|| ||||| | |||||||||||| |||||||||| ||| |||||||| || | ||
Sbjct: 132 ttaacaagccttgagaagacggcgacgagctcattggtgtgtgcagagagggaatgcccg 73
Query: 2918 atgcgctccctgacgctgtggaggcggctcaggacacggtcacctgcaccttcccccatt 2977
||||||||||| |||||||||| ||||||||| | || || |||||| |||||||||
Sbjct: 72 atgcgctccctcacgctgtggacacggctcagggcgcgctctcctgcagtctcccccatt 13
Query: 2978 gctgtcctcttc 2989
||||||||||||
Sbjct: 12 gctgtcctcttc 1
Score = 67.9 bits (34), Expect = 2e-009
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 3145 ccaggagacacgatgttgaacttggggtcgaacacatc 3182
|||||||||||||||||||||||||||||||| |||||
Sbjct: 1602 ccaggagacacgatgttgaacttggggtcgaagacatc 1565
>gb|BQ754675.1|BQ754675 EBed01_SQ003_H22_R endosperm, 6 DPA, no treatment, cv Optic, EBed01
Hordeum vulgare subsp. vulgare cDNA clone
EBed01_SQ003_H22 5', mRNA sequence
Length = 719
Score = 698 bits (352), Expect = 0.0
Identities = 598/680 (87%)
Strand = Plus / Minus
Query: 1310 agctcctcaatctccgggtgaagggaggtcagcctcttgtgcgactcggtgtacgggaag 1369
|||||||||||||| | || |||||||| |||||||| ||| || ||||| ||||||
Sbjct: 686 agctcctcaatctcagtatggagggaggtaagcctcttctgctgttcagtgtatgggaag 627
Query: 1370 tagatggacaggtccgcgccaggagacacgatgttgaacttggggtcgaacacatcaatg 1429
|||||||||| ||| || |||||||||||||||||||||||||||||||| ||||||||
Sbjct: 626 tagatggacatgtcagcaccaggagacacgatgttgaacttggggtcgaagacatcaata 567
Query: 1430 ccgtggacaacgcggtacaggccaggcattgtgaacgccatgtgtgactcgtactggccg 1489
|| |||||||| || || ||||| ||||||||||| |||||||| ||||||||||| ||
Sbjct: 566 ccatggacaacacgatagaggcctggcattgtgaatgccatgtgcgactcgtactgccct 507
Query: 1490 acggtgtccttgtttccggcgatctcttggaaggtactggtgatgatgaagtcggcatgg 1549
|||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct: 506 acggtgtccttgtttccggcaatctcttggaaggtactggtgatgatgaagtcagcatgg 447
Query: 1550 ttcattgcaatcaagtcagtggtgaactggcacgagaagtggtagtgatcctcaaacttc 1609
||||||||||||| ||| | |||||||||||| ||||||||||||||||||||||| |||
Sbjct: 446 ttcattgcaatcaggtcggcggtgaactggcatgagaagtggtagtgatcctcaaatttc 387
Query: 1610 ttccagtagaggtcggagttagggtacttagttttctcaagcgcatgggcaatggtacag 1669
|||||||| |||||||| || || ||||| |||||||| |||||||| |||||||||||
Sbjct: 386 ttccagtaaaggtcggaattgggatacttggttttctcgagcgcatgagcaatggtacaa 327
Query: 1670 tgagtaacacccatcttgtgggcgagcaaacacgcaacaaggtttccgtcactgtagttt 1729
|||||||| |||| |||||| || | ||||||||| |||||||| |||||||||||||||
Sbjct: 326 tgagtaactcccaacttgtgtgccaacaaacacgcgacaaggttaccgtcactgtagttt 267
Query: 1730 ccgatgatcaggtcaggattggcctgaagctctccagcaatctcatgcgccacgtcatca 1789
|| |||||||||||||| |||||||| |||||||| || |||||||| ||||| |||||
Sbjct: 266 ccaatgatcaggtcagggttggcctgcagctctccggcgatctcatgtgccacatcatcg 207
Query: 1790 gtgtaagtctccaggtacggccagacttcaaatcgcgagatccacttgcgaacgattccg 1849
||||||| |||||||| |||||||||||||| || |||||||| || ||||| || ||
Sbjct: 206 gtgtaagcttccaggtaaggccagacttcaaaacgggagatccatttccgaacaatacca 147
Query: 1850 ttttctgttctgaatggcacgcgaaggatatggcagtgctcggtgccaaggaccttctca 1909
| ||||||| |||||||||| || ||||| ||| |||||||||||||||||||||||||
Sbjct: 146 tcttctgttttgaatggcacacgcaggatgtgggtgtgctcggtgccaaggaccttctca 87
Query: 1910 aggcgctggccacaggtggtgccagttgcatcagggagcaacctggtgacaataaggatc 1969
|||||||||||||||||||||||| |||||||||||||| ||||||||| || || |||
Sbjct: 86 aggcgctggccacaggtggtgccatgtgcatcagggagcatcctggtgactattagaatc 27
Query: 1970 ttcggcgtgatgtcaagacc 1989
|| || || ||||| |||||
Sbjct: 26 tttggtgtaatgtcgagacc 7
Score = 75.8 bits (38), Expect = 8e-012
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 3145 ccaggagacacgatgttgaacttggggtcgaacacatcaatgccgtggac 3194
|||||||||||||||||||||||||||||||| |||||||| || |||||
Sbjct: 608 ccaggagacacgatgttgaacttggggtcgaagacatcaataccatggac 559
>gb|CK124965.1|CK124965 BES1824111A2d09 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010D0911 5-PRIME, mRNA sequence
Length = 928
Score = 696 bits (351), Expect = 0.0
Identities = 763/901 (84%), Gaps = 1/901 (0%)
Strand = Plus / Minus
Query: 978 tgtcgcagatgtagcggtacagctcgccgttgcggacgcggttcatctgggcggagatcc 1037
|||| |||||||||| ||| ||||| |||||||||||||||| ||| || || |||||||
Sbjct: 918 tgtcncagatgtagcngtagagctcnccgttgcggacgcggt-catntgagcagagatcc 860
Query: 1038 agcggatgtgcccgttcaggttgtactgctcgatgaggtcaaacatcttcttgaactcgg 1097
|||||||||| || |||||||||||| | || || ||||||||||||| |||||| |
Sbjct: 859 agcggatgtgnccactcaggttgtacttttntataagatcaaacatcttctggaactctg 800
Query: 1098 cctgctcctccttgtccttggaagggttgccatggtcgccgcagacgaccacgaggttca 1157
| |||||||||||||||||||| || |||||||| || ||||| ||||| ||||| |
Sbjct: 799 cttgctcctccttgtccttggacacctttccatggtcaccacagacaaccaccaggttta 740
Query: 1158 ccagctcctgcagccgcttgttccggccgtacagctccaccagcccagtcaagttcttca 1217
|||||||||| || || ||||| || |||| || ||||| ||||||| ||||| |
Sbjct: 739 ccagctcctgtaggcgaggattccgcccatacatttctaccaggccagtcatattcttga 680
Query: 1218 cacggtcgagacgagccatggagaagatgattggcttgttcctgtcgttcagaacgaact 1277
||||||| || | |||||| ||||||||||| ||||| ||| |||| |||| || || |
Sbjct: 679 cacggtccagcctagccatcgagaagatgatcggcttcttcttgtccttcaacacaaatt 620
Query: 1278 tgtgctccgtgttctcggtttggctgtacaggagctcctcaatctccgggtgaagggagg 1337
||||||| | ||||| | ||| | || |||||||||||||| | || |||||||
Sbjct: 619 tgtgctcagcattctcaacatcactgaatagtagctcctcaatctcagtatggagggagg 560
Query: 1338 tcagcctcttgtgcgactcggtgtacgggaagtagatggacaggtccgcgccaggagaca 1397
| |||||||| ||| || ||||| |||||||||||||||| ||| || ||||||||||
Sbjct: 559 taagcctcttctgctgttcagtgtatgggaagtagatggacatgtcagcaccaggagaca 500
Query: 1398 cgatgttgaacttggggtcgaacacatcaatgccgtggacaacgcggtacaggccaggca 1457
|||||||||||||||||||||| |||||||| || |||||||| || || ||||| ||||
Sbjct: 499 cgatgttgaacttggggtcgaagacatcaataccatggacaacacgatagaggcctggca 440
Query: 1458 ttgtgaacgccatgtgtgactcgtactggccgacggtgtccttgtttccggcgatctctt 1517
||||||| |||||||| ||||||||||| || |||||||||||||||||||| |||||||
Sbjct: 439 ttgtgaatgccatgtgcgactcgtactgccctacggtgtccttgtttccggcaatctctt 380
Query: 1518 ggaaggtactggtgatgatgaagtcggcatggttcattgcaatcaagtcagtggtgaact 1577
||||||||||||||||||||||||| ||||||||||||||||||| ||| | ||||||||
Sbjct: 379 ggaaggtactggtgatgatgaagtcagcatggttcattgcaatcaggtcggcggtgaact 320
Query: 1578 ggcacgagaagtggtagtgatcctcaaacttcttccagtagaggtcggagttagggtact 1637
|||| ||||||||||||||||||||||| ||||||||||| |||||||| || || ||||
Sbjct: 319 ggcatgagaagtggtagtgatcctcaaatttcttccagtaaaggtcggaattgggatact 260
Query: 1638 tagttttctcaagcgcatgggcaatggtacagtgagtaacacccatcttgtgggcgagca 1697
| |||||||| |||||||| ||||||||||| |||||||| |||| |||||| || | ||
Sbjct: 259 tggttttctcgagcgcatgagcaatggtacaatgagtaactcccaacttgtgtgccaaca 200
Query: 1698 aacacgcaacaaggtttccgtcactgtagtttccgatgatcaggtcaggattggcctgaa 1757
||||||| |||||||| ||||||||||||||||| |||||||||||||| |||||||| |
Sbjct: 199 aacacgcgacaaggttaccgtcactgtagtttccaatgatcaggtcagggttggcctgca 140
Query: 1758 gctctccagcaatctcatgcgccacgtcatcagtgtaagtctccaggtacggccagactt 1817
||||||| || |||||||| ||||| ||||| ||||||| |||||||| ||||||||||
Sbjct: 139 gctctccggcgatctcatgtgccacatcatcggtgtaagcttccaggtaaggccagactt 80
Query: 1818 caaatcgcgagatccacttgcgaacgattccgttttctgttctgaatggcacgcgaagga 1877
|||| || |||||||| || ||||| || || | ||||||| |||||||||| || ||||
Sbjct: 79 caaaacgggagatccatttccgaacaataccatcttctgttttgaatggcacacgcagga 20
Query: 1878 t 1878
|
Sbjct: 19 t 19
Score = 75.8 bits (38), Expect = 8e-012
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 3145 ccaggagacacgatgttgaacttggggtcgaacacatcaatgccgtggac 3194
|||||||||||||||||||||||||||||||| |||||||| || |||||
Sbjct: 509 ccaggagacacgatgttgaacttggggtcgaagacatcaataccatggac 460
>gb|AL508345.1|AL508345 AL508345 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY08H21V 5',
mRNA sequence
Length = 700
Score = 688 bits (347), Expect = 0.0
Identities = 609/694 (87%), Gaps = 2/694 (0%)
Strand = Plus / Minus
Query: 1448 aggccaggcattgtgaacgcc-atgtgtgactcgtactggccg-acggtgtccttgtttc 1505
||||| ||||||||||| ||| ||||| |||||||||| ||| ||||||||||||||||
Sbjct: 695 aggcctggcattgtgaatgcccatgtgcgactcgtacttgccctacggtgtccttgtttc 636
Query: 1506 cggcgatctcttggaaggtactggtgatgatgaagtcggcatggttcattgcaatcaagt 1565
|||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||
Sbjct: 635 cggcaatctcttggaaggtactggtgatgatgaagtcagcatggttcattgcaatcaggt 576
Query: 1566 cagtggtgaactggcacgagaagtggtagtgatcctcaaacttcttccagtagaggtcgg 1625
| | |||||||||||| ||||||||||||||||||||||| ||||||||||| |||||||
Sbjct: 575 cggcggtgaactggcatgagaagtggtagtgatcctcaaatttcttccagtaaaggtcgg 516
Query: 1626 agttagggtacttagttttctcaagcgcatgggcaatggtacagtgagtaacacccatct 1685
| || || ||||| |||||||| |||||||| ||||||||||| |||||||| |||| ||
Sbjct: 515 aattgggatacttggttttctcgagcgcatgagcaatggtacaatgagtaactcccaact 456
Query: 1686 tgtgggcgagcaaacacgcaacaaggtttccgtcactgtagtttccgatgatcaggtcag 1745
|||| || | ||||||||| |||||||| ||||||||||||||||| |||||||||||||
Sbjct: 455 tgtgtgccaacaaacacgcgacaaggttaccgtcactgtagtttccaatgatcaggtcag 396
Query: 1746 gattggcctgaagctctccagcaatctcatgcgccacgtcatcagtgtaagtctccaggt 1805
| |||||||| |||||||| || |||||||| ||||| ||||| ||||||| |||||||
Sbjct: 395 ggttggcctgcagctctccggcgatctcatgtgccacatcatcggtgtaagcttccaggt 336
Query: 1806 acggccagacttcaaatcgcgagatccacttgcgaacgattccgttttctgttctgaatg 1865
| |||||||||||||| || |||||||| || ||||| || || | ||||||| ||||||
Sbjct: 335 aaggccagacttcaaaacgggagatccatttccgaacaataccatcttctgttttgaatg 276
Query: 1866 gcacgcgaaggatatggcagtgctcggtgccaaggaccttctcaaggcgctggccacagg 1925
|||| || ||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 gcacacgcaggatgtgggtgtgctcggtgccaaggaccttctcaaggcgctggccacagg 216
Query: 1926 tggtgccagttgcatcagggagcaacctggtgacaataaggatcttcggcgtgatgtcaa 1985
|||||||| |||||||||||||| ||||||||| || || ||||| || || ||||| |
Sbjct: 215 tggtgccatgtgcatcagggagcatcctggtgactattagaatctttggtgtaatgtcga 156
Query: 1986 gaccacactgcttgatcctcagcagcatttcgttctccatagcgcgcacttgatccaaga 2045
|||| ||||||||| |||| |||||| || ||||||||||| || ||||| ||||| |
Sbjct: 155 gaccttgctgcttgattctcaacagcatctcattctccatagcacggacttggtccaaaa 96
Query: 2046 tgtagacaacctggcctccggtgtcagggtaacccaagacattagcttgagcgaagtaac 2105
||||||||||||| || || || |||||||| ||||||||||| || |||||||||||||
Sbjct: 95 tgtagacaacctgtccgccagtatcagggtaccccaagacattggcctgagcgaagtaac 36
Query: 2106 catgaggggagaggataacgacattgaacaccat 2139
||||||| ||||||||||| ||||||||| ||||
Sbjct: 35 catgaggagagaggataacaacattgaacnccat 2
>gb|BG418599.2|BG418599 HVSMEk0023G16f Hordeum vulgare testa/pericarp EST library HVcDNA0013
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEk0023G16f, mRNA sequence
Length = 863
Score = 668 bits (337), Expect = 0.0
Identities = 696/812 (85%), Gaps = 3/812 (0%)
Strand = Plus / Minus
Query: 1495 gtccttgtttccggcgatctcttggaaggtactggtgatgatgaagtcggcatggttcat 1554
||||||| | ||||| |||||||| |||||| ||| |||||||||| ||| | |||||
Sbjct: 859 gtccttggtaccggcaatctcttgaaaggtattgggattgatgaagtcagcaggtttcat 800
Query: 1555 tgcaatcaag-tcagtggtgaactggcacgagaagtggtagtgatcctcaaacttcttcc 1613
|||| ||||| || | |||||||||||| |||||||||||||||||||| || |||||||
Sbjct: 799 tgca-tcaaggtcggcggtgaactggcatgagaagtggtagtgatcctcnaatttcttcc 741
Query: 1614 agtagaggtcggagttagggtacttagttttctcaagcgcatgggcaatggtacagtgag 1673
|||| |||||||| || || ||||| |||| ||| |||||||| ||||||||||| ||||
Sbjct: 740 agtaaaggtcggaattgggatacttggttt-ctcgagcgcatgagcaatggtacaatgag 682
Query: 1674 taacacccatcttgtgggcgagcaaacacgcaacaaggtttccgtcactgtagtttccga 1733
|||| |||| |||||| || | ||||||||| |||||||| ||||||||||||||||| |
Sbjct: 681 taactcccaacttgtgtgccaacaaacacgcgacaaggttaccgtcactgtagtttccaa 622
Query: 1734 tgatcaggtcaggattggcctgaagctctccagcaatctcatgcgccacgtcatcagtgt 1793
||||||||||||| |||||||| |||||||| || |||||||| ||||| ||||| ||||
Sbjct: 621 tgatcaggtcagggttggcctgcagctctccggcgatctcatgtgccacatcatcggtgt 562
Query: 1794 aagtctccaggtacggccagacttcaaatcgcgagatccacttgcgaacgattccgtttt 1853
||| |||||||| |||||||||||||| || |||||||| || ||||| || || | ||
Sbjct: 561 aagcttccaggtaaggccagacttcaaaacgggagatccatttccgaacaataccatctt 502
Query: 1854 ctgttctgaatggcacgcgaaggatatggcagtgctcggtgccaaggaccttctcaaggc 1913
||||| |||||||||| || ||||| ||| |||||||||||||||||||||||||||||
Sbjct: 501 ctgttttgaatggcacacgcaggatgtgggtgtgctcggtgccaaggaccttctcaaggc 442
Query: 1914 gctggccacaggtggtgccagttgcatcagggagcaacctggtgacaataaggatcttcg 1973
|||||||||||||||||||| |||||||||||||| ||||||||| || || ||||| |
Sbjct: 441 gctggccacaggtggtgccatgtgcatcagggagcatcctggtgactattagaatctttg 382
Query: 1974 gcgtgatgtcaagaccacactgcttgatcctcagcagcatttcgttctccatagcgcgca 2033
| || ||||| ||||| ||||||||| |||| |||||| || ||||||||||| || |
Sbjct: 381 gtgtaatgtcgagaccttgctgcttgattctcaacagcatctcattctccatagcacgga 322
Query: 2034 cttgatccaagatgtagacaacctggcctccggtgtcagggtaacccaagacattagctt 2093
|||| ||||| |||||||||||||| || || || |||||||| ||||||||||| || |
Sbjct: 321 cttggtccaaaatgtagacaacctgtccgccagtatcagggtaccccaagacattggcct 262
Query: 2094 gagcgaagtaaccatgaggggagaggataacgacattgaacaccatggggatcgttccaa 2153
||||||||||||||||||| ||||||||||| |||||||||||||| ||||| ||||| |
Sbjct: 261 gagcgaagtaaccatgaggagagaggataacaacattgaacaccattgggattgttccga 202
Query: 2154 ggaacttctccagggtggacggatctggggcctccaggaggtccaagaggaggtggatag 2213
|||||||||||| || ||| ||||| |||||||| || ||||||||||| ||||||||||
Sbjct: 201 ggaacttctccaaggaggatggatcaggggcctcgagaaggtccaagagaaggtggatag 142
Query: 2214 tctcctgtgcacgcttagcgcaatcaccccaacccttctccagaccaagttcctggaacc 2273
|||| ||||||| ||| || || ||||| || ||||||| |||||||||||||||||
Sbjct: 141 tctcgctcgcacgctgagcacagtcgccccagcctttctccaaaccaagttcctggaacc 82
Query: 2274 tgtggtgaaattcagagtatggggtatcagct 2305
|||||| || || ||||| ||||| ||||||
Sbjct: 81 ggtggtggaactcggagtaaggggtgtcagct 50
>gb|BI958295.1|BI958295 HVSMEn0014E13f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0014E13f,
mRNA sequence
Length = 646
Score = 662 bits (334), Expect = 0.0
Identities = 568/646 (87%)
Strand = Plus / Minus
Query: 1189 cagctccaccagcccagtcaagttcttcacacggtcgagacgagccatggagaagatgat 1248
|||||| ||||| |||||||||||||| |||||||| | |||||||||||||||||||||
Sbjct: 646 cagctcaaccagaccagtcaagttcttgacacggtccaaacgagccatggagaagatgat 587
Query: 1249 tggcttgttcctgtcgttcagaacgaacttgtgctccgtgttctcggtttggctgtacag 1308
||||||||||||||| || || || |||||||||| |||| ||| | ||||| ||
Sbjct: 586 tggcttgttcctgtccttgagcacatacttgtgctcattgttgtcgacattactgtagag 527
Query: 1309 gagctcctcaatctccgggtgaagggaggtcagcctcttgtgcgactcggtgtacgggaa 1368
|||||||||||||| ||||| |||||||| |||||| | || ||||||| ||| |||||
Sbjct: 526 cagctcctcaatctctgggtggagggaggtgagcctcctctgtgactcggagtatgggaa 467
Query: 1369 gtagatggacaggtccgcgccaggagacacgatgttgaacttggggtcgaacacatcaat 1428
||||||||||| |||||| ||||| || || ||||| |||||||||||||| ||||| ||
Sbjct: 466 gtagatggacatgtccgcaccaggtgagactatgttaaacttggggtcgaaaacatcgat 407
Query: 1429 gccgtggacaacgcggtacaggccaggcattgtgaacgccatgtgtgactcgtactggcc 1488
|| |||||||| ||||||| |||||||||||||| |||||||| ||||||||||| ||
Sbjct: 406 accatggacaacacggtacattccaggcattgtgaatgccatgtgagactcgtactgacc 347
Query: 1489 gacggtgtccttgtttccggcgatctcttggaaggtactggtgatgatgaagtcggcatg 1548
|||||||||||||||||| || |||||||||||||| || ||||||||||||||||||||
Sbjct: 346 gacggtgtccttgtttccagcaatctcttggaaggtgcttgtgatgatgaagtcggcatg 287
Query: 1549 gttcattgcaatcaagtcagtggtgaactggcacgagaagtggtagtgatcctcaaactt 1608
|||||| ||||||| ||| || ||||||||||| |||||||||||||| |||||||||||
Sbjct: 286 gttcatggcaatcaggtccgtagtgaactggcatgagaagtggtagtggtcctcaaactt 227
Query: 1609 cttccagtagaggtcggagttagggtacttagttttctcaagcgcatgggcaatggtaca 1668
||||||||||||||| ||||| |||||||| |||||||||||||| || |||||||||||
Sbjct: 226 cttccagtagaggtcagagttggggtacttggttttctcaagcgcgtgcgcaatggtaca 167
Query: 1669 gtgagtaacacccatcttgtgggcgagcaaacacgcaacaaggtttccgtcactgtagtt 1728
|||||||||||||||||||| || |||| || |||||||||||||| || ||||||||
Sbjct: 166 atgagtaacacccatcttgtgcgcaagcaggcaagcaacaaggtttccatcgctgtagtt 107
Query: 1729 tccgatgatcaggtcaggattggcctgaagctctccagcaatctcatgcgccacgtcatc 1788
||||||||| || || ||||||||||| |||||||||| ||||||||| ||||| || ||
Sbjct: 106 tccgatgatgagatcgggattggcctggagctctccagaaatctcatgtgccacatcttc 47
Query: 1789 agtgtaagtctccaggtacggccagacttcaaatcgcgagatccac 1834
|||| |||||||||||||||||||||||||||| || |||||||||
Sbjct: 46 agtgaaagtctccaggtacggccagacttcaaaacgagagatccac 1
>gb|AL506943.1|AL506943 AL506943 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY04L06T 5',
mRNA sequence
Length = 700
Score = 660 bits (333), Expect = 0.0
Identities = 557/632 (88%)
Strand = Plus / Minus
Query: 1314 cctcaatctccgggtgaagggaggtcagcctcttgtgcgactcggtgtacgggaagtaga 1373
|||||||||| | || ||| |||| |||||||| ||| || ||||| ||||||||||
Sbjct: 633 cctcaatctcagtatggaggnaggtaagcctcttctgctgttcagtgtatgggaagtaga 574
Query: 1374 tggacaggtccgcgccaggagacacgatgttgaacttggggtcgaacacatcaatgccgt 1433
|||||| ||| || |||||||||||||||||||||||||||||||| |||||||| || |
Sbjct: 573 tggacatgtcagcaccaggagacacgatgttgaacttggggtcgaagacatcaataccat 514
Query: 1434 ggacaacgcggtacaggccaggcattgtgaacgccatgtgtgactcgtactggccgacgg 1493
||||||| || || ||||| ||||||||||| |||||||| ||||||||||| || ||||
Sbjct: 513 ggacaacacgatagaggcctggcattgtgaatgccatgtgcgactcgtactgccctacgg 454
Query: 1494 tgtccttgtttccggcgatctcttggaaggtactggtgatgatgaagtcggcatggttca 1553
|||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 453 tgtccttgtttccggcaatctcttggaaggtactggtgatgatgaagtcagcatggttca 394
Query: 1554 ttgcaatcaagtcagtggtgaactggcacgagaagtggtagtgatcctcaaacttcttcc 1613
||||||||| ||| | |||||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 393 ttgcaatcaggtcggcggtgaactggcatgagaagtggtagtgatcctcaaatttcttcc 334
Query: 1614 agtagaggtcggagttagggtacttagttttctcaagcgcatgggcaatggtacagtgag 1673
|||| |||||||| || || ||||| |||||||| |||||||| ||||||||||| ||||
Sbjct: 333 agtaaaggtcggaattgggatacttggttttctcgagcgcatgagcaatggtacaatgag 274
Query: 1674 taacacccatcttgtgggcgagcaaacacgcaacaaggtttccgtcactgtagtttccga 1733
|||| |||| |||||| || | ||||||||| |||||||| ||||||||||||||||| |
Sbjct: 273 taactcccaacttgtgtgccaacaaacacgcgacaaggttaccgtcactgtagtttccaa 214
Query: 1734 tgatcaggtcaggattggcctgaagctctccagcaatctcatgcgccacgtcatcagtgt 1793
||||||||||||| |||||||| |||||||| || |||||||| ||||| ||||| ||||
Sbjct: 213 tgatcaggtcagggttggcctgcagctctccggcgatctcatgtgccacatcatcggtgt 154
Query: 1794 aagtctccaggtacggccagacttcaaatcgcgagatccacttgcgaacgattccgtttt 1853
||| |||||||| |||||||||||||| || |||||||| || ||||| || || | ||
Sbjct: 153 aagcttccaggtaaggccagacttcaaaacgggagatccatttccgaacaataccatctt 94
Query: 1854 ctgttctgaatggcacgcgaaggatatggcagtgctcggtgccaaggaccttctcaaggc 1913
||||| |||||||||| || ||||| ||| |||||||||||||||||||||||||||||
Sbjct: 93 ctgttttgaatggcacacgcaggatgtgggtgtgctcggtgccaaggaccttctcaaggc 34
Query: 1914 gctggccacaggtggtgccagttgcatcaggg 1945
|||||||||||||||||||| ||||||||||
Sbjct: 33 gctggccacaggtggtgccatgtgcatcaggg 2
Score = 75.8 bits (38), Expect = 8e-012
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 3145 ccaggagacacgatgttgaacttggggtcgaacacatcaatgccgtggac 3194
|||||||||||||||||||||||||||||||| |||||||| || |||||
Sbjct: 559 ccaggagacacgatgttgaacttggggtcgaagacatcaataccatggac 510
>gb|BG418071.1|BG418071 HVSMEk0021C19f Hordeum vulgare testa/pericarp EST library HVcDNA0013
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEk0021C19f, mRNA sequence
Length = 845
Score = 638 bits (322), Expect = 0.0
Identities = 695/816 (85%), Gaps = 3/816 (0%)
Strand = Plus / Minus
Query: 1696 caaacacgcaacaaggtttccgtcactgtagtttccgatgatcaggtcaggattggcctg 1755
||||||||| ||||||| |||||||||||||| || |||||||||||||| ||||||||
Sbjct: 823 caaacacgcgacaaggta-ccgtcactgtagtt-ccaatgatcaggtcagggttggcctg 766
Query: 1756 aagctctccagcaatctcatgcgccacgtcatcagtgtaagtctccaggtacggccagac 1815
|||||||| || |||||||| ||||| ||||| |||| || | |||||| ||||||||
Sbjct: 765 cagctctccggcgatctcatgtgccacatcatcggtgtnagcttncaggtaaggccagac 706
Query: 1816 ttcaaatcgcgagatccacttgcgaacgattccgttttctgttctgaatggcacgcgaag 1875
|||||| || |||||||| || ||||| || || | ||||||| |||||||||| || ||
Sbjct: 705 ttcaaaacgggagatccatttccgaacaataccatcttctgttttgaatggcacacgcag 646
Query: 1876 gatatggcagtgctcggtgccaaggaccttctcaaggcgctggccacaggtggtgccagt 1935
||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 645 gatgtgggtgtgctcggtgccaaggac-ttctcaaggcgctggccacaggtggtgccatg 587
Query: 1936 tgcatcagggagcaacctggtgacaataaggatcttcggcgtgatgtcaagaccacactg 1995
|||||||||||||| | |||||| || || ||||| || || ||||| ||||| |||
Sbjct: 586 tgcatcagggagcatctgggtgactattagaatctttggtgtaatgtcgagaccttgctg 527
Query: 1996 cttgatcctcagcagcatttcgttctccatagcgcgcacttgatccaagatgtagacaac 2055
|||||| |||| |||||| || ||||||||||| || ||||| ||||| |||||||||||
Sbjct: 526 cttgattctcaacagcatctcattctccatagcacggacttggtccaaaatgtagacaac 467
Query: 2056 ctggcctccggtgtcagggtaacccaagacattagcttgagcgaagtaaccatgagggga 2115
||| || || || |||||||| ||||||||||| || |||||||||||||||||||| ||
Sbjct: 466 ctgtccgccagtatcagggtaccccaagacattggcctgagcgaagtaaccatgaggaga 407
Query: 2116 gaggataacgacattgaacaccatggggatcgttccaaggaacttctccagggtggacgg 2175
||||||||| |||||||||||||| ||||| ||||| ||||||||||||| || ||| ||
Sbjct: 406 gaggataacaacattgaacaccattgggattgttccgaggaacttctccaaggaggatgg 347
Query: 2176 atctggggcctccaggaggtccaagaggaggtggatagtctcctgtgcacgcttagcgca 2235
||| |||||||| || ||||||||||| |||||||||||||| ||||||| ||| ||
Sbjct: 346 atcaggggcctcgagaaggtccaagagaaggtggatagtctcgctcgcacgctgagcaca 287
Query: 2236 atcaccccaacccttctccagaccaagttcctggaacctgtggtgaaattcagagtatgg 2295
|| ||||| || ||||||| ||||||||||||||||| |||||| || || ||||| ||
Sbjct: 286 gtcgccccagcctttctccaaaccaagttcctggaaccggtggtggaactcggagtaagg 227
Query: 2296 ggtatcagcttgtagggtggacaggtgctcctcagccttcctcagcgcaccttgcagagc 2355
||| |||||| | ||| ||||| || ||| |||||||| || |||||||| || |
Sbjct: 226 ggtgtcagctggaaggcctgacagatgtgtctctgccttcctgagtgcaccttggagggt 167
Query: 2356 actgagactgcggattctgtcgttcaacatcatggtcatccccttgtagttgtgggcgcg 2415
|| ||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 166 accgagactgcgaattctgtcattcaacatcatggtcatccccttgtagttgtgcgcgcg 107
Query: 2416 aaggaagttgagcaaggggtacatgctctccttgtcatggaagagctttgatgacaggtg 2475
||||||||| ||||| ||||||||||||||||| |||||||| ||||| || |||| |||
Sbjct: 106 aaggaagttaagcaatgggtacatgctctccttatcatggaacagcttcgacgacaagtg 47
Query: 2476 cctgttgaggaactgcacgccattgccaatggactt 2511
|||||| || |||||||| || ||||||||||||||
Sbjct: 46 cctgttcagaaactgcacaccgttgccaatggactt 11
>gb|BG345116.2|BG345116 HVSMEg0018M02f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0018M02f, mRNA sequence
Length = 873
Score = 634 bits (320), Expect = e-180
Identities = 635/738 (86%), Gaps = 2/738 (0%)
Strand = Plus / Minus
Query: 932 agcccgaaagcctcgtagaaagcaggctgcacgaaggcgcccttggt-gtcgcagatgta 990
||||||||||| || |||||||| |||||||| ||||| |||||||| ||||||||||||
Sbjct: 739 agcccgaaagcttcatagaaagcgggctgcacaaaggcacccttggttgtcgcagatgta 680
Query: 991 gcggtacagctcgccgttgcggacgcggttcatctgggcggagatccagcggatgtgccc 1050
||||| ||||| | | || |||||||||||||||||||||||||||| || ||
Sbjct: 679 acggtagagctcagcatacgnnacacggttcatctgggcggagatccagcggacatggcc 620
Query: 1051 gttcaggttgtactgctcgatgaggtcaaacatcttcttgaactcggcctgctcctcctt 1110
||||||||||||||||| || ||||| ||||||| ||||||||| ||||||||||||||
Sbjct: 619 attcaggttgtactgctcaataaggtcgaacatct-cttgaactcagcctgctcctcctt 561
Query: 1111 gtccttggaagggttgccatggtcgccgcagacgaccacgaggttcaccagctcctgcag 1170
||| || || || ||||||||||| || ||||| ||||| ||||| || ||||||||||
Sbjct: 560 gtcttttgatggattgccatggtcaccacagacaaccacaaggttaacaagctcctgcaa 501
Query: 1171 ccgcttgttccggccgtacagctccaccagcccagtcaagttcttcacacggtcgagacg 1230
|| |||| ||| |||||||| ||||| |||||||||||||| |||||||| | |||
Sbjct: 500 gcgagggttcttgccatacagctcaaccagaccagtcaagttcttgacacggtccaaacg 441
Query: 1231 agccatggagaagatgattggcttgttcctgtcgttcagaacgaacttgtgctccgtgtt 1290
||||||||||||||||||||||||||||||||| || || || |||||||||| ||||
Sbjct: 440 agccatggagaagatgattggcttgttcctgtccttgagcacatacttgtgctcattgtt 381
Query: 1291 ctcggtttggctgtacaggagctcctcaatctccgggtgaagggaggtcagcctcttgtg 1350
||| | ||||| || |||||||||||||| ||||| |||||||| |||||| | ||
Sbjct: 380 gtcgacattactgtagagcagctcctcaatctctgggtggagggaggtgagcctcctctg 321
Query: 1351 cgactcggtgtacgggaagtagatggacaggtccgcgccaggagacacgatgttgaactt 1410
||||||| ||| |||||||||||||||| |||||| ||||| || || ||||| |||||
Sbjct: 320 tgactcggagtatgggaagtagatggacatgtccgcaccaggtgagactatgttaaactt 261
Query: 1411 ggggtcgaacacatcaatgccgtggacaacgcggtacaggccaggcattgtgaacgccat 1470
||||||||| ||||| || || |||||||| ||||||| |||||||||||||| |||||
Sbjct: 260 ggggtcgaaaacatcgataccatggacaacacggtacattccaggcattgtgaatgccat 201
Query: 1471 gtgtgactcgtactggccgacggtgtccttgtttccggcgatctcttggaaggtactggt 1530
||| ||||||||||| |||||||||||||||||||| || |||||||||||||| || ||
Sbjct: 200 gtgagactcgtactgaccgacggtgtccttgtttccagcaatctcttggaaggtgcttgt 141
Query: 1531 gatgatgaagtcggcatggttcattgcaatcaagtcagtggtgaactggcacgagaagtg 1590
|||||||||||||||||||||||| ||||||| ||| || ||||||||||| ||||||||
Sbjct: 140 gatgatgaagtcggcatggttcatggcaatcaggtccgtagtgaactggcatgagaagtg 81
Query: 1591 gtagtgatcctcaaacttcttccagtagaggtcggagttagggtacttagttttctcaag 1650
|||||| |||||||||||||||||||||||||| ||||| |||||||| |||||||||||
Sbjct: 80 gtagtggtcctcaaacttcttccagtagaggtcagagttggggtacttggttttctcaag 21
Query: 1651 cgcatgggcaatggtaca 1668
||| || |||||||||||
Sbjct: 20 cgcgtgcgcaatggtaca 3
>gb|AL508689.1|AL508689 AL508689 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY09I05V 5',
mRNA sequence
Length = 693
Score = 605 bits (305), Expect = e-171
Identities = 514/584 (88%)
Strand = Plus / Minus
Query: 1454 ggcattgtgaacgccatgtgtgactcgtactggccgacggtgtccttgtttccggcgatc 1513
||||||||||| |||||||| ||||||||||| || |||||||||||||||||||| |||
Sbjct: 586 ggcattgtgaatgccatgtgcgactcgtactgccctacggtgtccttgtttccggcaatc 527
Query: 1514 tcttggaaggtactggtgatgatgaagtcggcatggttcattgcaatcaagtcagtggtg 1573
||||||||||||||||||||||||||||| ||||||||||||||||||| ||| | ||||
Sbjct: 526 tcttggaaggtactggtgatgatgaagtcagcatggttcattgcaatcaggtcggcggtg 467
Query: 1574 aactggcacgagaagtggtagtgatcctcaaacttcttccagtagaggtcggagttaggg 1633
|||||||| ||||||||||||||||||||||| ||||||||||| |||||||| || ||
Sbjct: 466 aactggcatgagaagtggtagtgatcctcaaatttcttccagtaaaggtcggaattggga 407
Query: 1634 tacttagttttctcaagcgcatgggcaatggtacagtgagtaacacccatcttgtgggcg 1693
||||| |||||||| |||||||| ||||||||||| |||||||| |||| |||||| ||
Sbjct: 406 tacttggttttctcgagcgcatgagcaatggtacaatgagtaactcccaacttgtgtgcc 347
Query: 1694 agcaaacacgcaacaaggtttccgtcactgtagtttccgatgatcaggtcaggattggcc 1753
| ||||||||| |||||||| ||||||||||||||||| |||||||||||||| ||||||
Sbjct: 346 aacaaacacgcgacaaggttaccgtcactgtagtttccaatgatcaggtcagggttggcc 287
Query: 1754 tgaagctctccagcaatctcatgcgccacgtcatcagtgtaagtctccaggtacggccag 1813
|| |||||||| || |||||||| ||||| ||||| ||||||| |||||||| ||||||
Sbjct: 286 tgcagctctccggcgatctcatgtgccacatcatcggtgtaagcttccaggtaaggccag 227
Query: 1814 acttcaaatcgcgagatccacttgcgaacgattccgttttctgttctgaatggcacgcga 1873
|||||||| || |||||||| || ||||| || || | ||||||| |||||||||| ||
Sbjct: 226 acttcaaaacgggagatccatttccgaacaataccatcttctgttttgaatggcacacgc 167
Query: 1874 aggatatggcagtgctcggtgccaaggaccttctcaaggcgctggccacaggtggtgcca 1933
||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 aggatgtgggtgtgctcggtgccaaggaccttctcaaggcgctggccacaggtggtgcca 107
Query: 1934 gttgcatcagggagcaacctggtgacaataaggatcttcggcgtgatgtcaagaccacac 1993
|||||||||||||| ||||||||| || || ||||| || || ||||| ||||| |
Sbjct: 106 tgtgcatcagggagcatcctggtgactattagaatctttggtgtaatgtcgagaccttgc 47
Query: 1994 tgcttgatcctcagcagcatttcgttctccatagcgcgcacttg 2037
|||||||| |||| |||||| || ||||||||||| || |||||
Sbjct: 46 tgcttgattctcaacagcatctcattctccatagcacgnacttg 3
>gb|BI951201.1|BI951201 HVSMEl0025A10f Hordeum vulgare spike EST library HVcDNA0012 (Fusarium
infected) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEl0025A10f, mRNA sequence
Length = 570
Score = 593 bits (299), Expect = e-167
Identities = 501/567 (88%), Gaps = 1/567 (0%)
Strand = Plus / Minus
Query: 1367 aagtagatggacaggtccgcgccaggagacacgatgttgaacttggggtcgaacacatca 1426
||||||||| ||| ||| || ||||||||||||||| ||||||||||||||| ||||||
Sbjct: 567 aagtagatgaacatgtcagcatcaggagacacgatgt-gaacttggggtcgaagacatca 509
Query: 1427 atgccgtggacaacgcggtacaggccaggcattgtgaacgccatgtgtgactcgtactgg 1486
|| || ||| |||| || || |||| ||||||||||| |||||||| |||||||||||
Sbjct: 508 ataccatggccaacacgatagaggcttggcattgtgaatgccatgtgcgactcgtactgc 449
Query: 1487 ccgacggtgtccttgtttccggcgatctcttggaaggtactggtgatgatgaagtcggca 1546
|| |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 448 cctacggtgtccttgtttccggcaatctcttggaaggtactggtgatgatgaagtcagca 389
Query: 1547 tggttcattgcaatcaagtcagtggtgaactggcacgagaagtggtagtgatcctcaaac 1606
|||||||||||||||| ||| | |||||||||||| |||||||||||||||||||||||
Sbjct: 388 tggttcattgcaatcaggtcggcggtgaactggcatgagaagtggtagtgatcctcaaat 329
Query: 1607 ttcttccagtagaggtcggagttagggtacttagttttctcaagcgcatgggcaatggta 1666
||||||||||| |||||||| || || ||||| |||||||| |||||||| |||||||||
Sbjct: 328 ttcttccagtaaaggtcggaattgggatacttggttttctcgagcgcatgagcaatggta 269
Query: 1667 cagtgagtaacacccatcttgtgggcgagcaaacacgcaacaaggtttccgtcactgtag 1726
|| |||||||| |||| |||||| || | ||||||||| |||||||| ||||||||||||
Sbjct: 268 caatgagtaactcccaacttgtgtgccaacaaacacgcgacaaggttaccgtcactgtag 209
Query: 1727 tttccgatgatcaggtcaggattggcctgaagctctccagcaatctcatgcgccacgtca 1786
||||| |||||||||||||| |||||||| |||||||| || |||||||| ||||| |||
Sbjct: 208 tttccaatgatcaggtcagggttggcctgcagctctccggcgatctcatgtgccacatca 149
Query: 1787 tcagtgtaagtctccaggtacggccagacttcaaatcgcgagatccacttgcgaacgatt 1846
|| ||||||| |||||||| |||||||||||||| || |||||||| || ||||| ||
Sbjct: 148 tcggtgtaagcttccaggtaaggccagacttcaaaacgggagatccatttccgaacaata 89
Query: 1847 ccgttttctgttctgaatggcacgcgaaggatatggcagtgctcggtgccaaggaccttc 1906
|| | ||||||| |||||||||| || ||||| ||| ||||||||||||||||||||||
Sbjct: 88 ccatcttctgttttgaatggcacacgcaggatgtgggtgtgctcggtgccaaggaccttc 29
Query: 1907 tcaaggcgctggccacaggtggtgcca 1933
|||||||||||||||||||||||||||
Sbjct: 28 tcaaggcgctggccacaggtggtgcca 2
Score = 56.0 bits (28), Expect = 7e-006
Identities = 38/40 (95%), Gaps = 1/40 (2%)
Strand = Plus / Minus
Query: 3146 caggagacacgatgttgaacttggggtcgaacacatcaat 3185
||||||||||||||| ||||||||||||||| ||||||||
Sbjct: 545 caggagacacgatgt-gaacttggggtcgaagacatcaat 507
>gb|BG414980.2|BG414980 HVSMEk0004I12f Hordeum vulgare testa/pericarp EST library HVcDNA0013
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEk0004I12f, mRNA sequence
Length = 895
Score = 585 bits (295), Expect = e-165
Identities = 586/683 (85%)
Strand = Plus / Minus
Query: 1196 accagcccagtcaagttcttcacacggtcgagacgagccatggagaagatgattggcttg 1255
||||| ||||||| ||||| |||||||| || | |||||| ||||||||||| |||||
Sbjct: 685 accaggccagtcatattcttgacacggtccagcctagccatcgagaagatgatcggcttc 626
Query: 1256 ttcctgtcgttcagaacgaacttgtgctccgtgttctcggtttggctgtacaggagctcc 1315
||| |||| |||| || || |||||||| | ||||| | ||| | || ||||||
Sbjct: 625 ttcttgtccttcaacacaaatttgtgctcagcattctcaacatcactgaatagtagctcc 566
Query: 1316 tcaatctccgggtgaagggaggtcagcctcttgtgcgactcggtgtacgggaagtagatg 1375
|||||||| | || |||||||| |||||||| ||| || ||||| ||||||||||||
Sbjct: 565 tcaatctcagtatggagggaggtaagcctcttctgctgttcagtgtatgggaagtagatg 506
Query: 1376 gacaggtccgcgccaggagacacgatgttgaacttggggtcgaacacatcaatgccgtgg 1435
|||| ||| || |||||||||||||||||||||||||||||||| |||||||| || |||
Sbjct: 505 gacatgtcagcaccaggagacacgatgttgaacttggggtcgaagacatcaataccatgg 446
Query: 1436 acaacgcggtacaggccaggcattgtgaacgccatgtgtgactcgtactggccgacggtg 1495
||||| || || ||||| ||||||||||| |||||||| ||||||||||| || ||||||
Sbjct: 445 acaacacgatagaggcctggcattgtgaatgccatgtgcgactcgtactgccctacggtg 386
Query: 1496 tccttgtttccggcgatctcttggaaggtactggtgatgatgaagtcggcatggttcatt 1555
|||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 385 tccttgtttccggcaatctcttggaaggtactggtgatgatgaagtcagcatggttcatt 326
Query: 1556 gcaatcaagtcagtggtgaactggcacgagaagtggtagtgatcctcaaacttcttccag 1615
||||||| ||| | |||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 325 gcaatcaggtcggcggtgaactggcatgagaagtggtagtgatcctcaaatttcttccag 266
Query: 1616 tagaggtcggagttagggtacttagttttctcaagcgcatgggcaatggtacagtgagta 1675
|| |||||||| || || ||||| |||||||| |||||||| ||||||||||| ||||||
Sbjct: 265 taaaggtcggaattgggatacttggttttctcgagcgcatgagcaatggtacaatgagta 206
Query: 1676 acacccatcttgtgggcgagcaaacacgcaacaaggtttccgtcactgtagtttccgatg 1735
|| |||| |||||| || | ||||||||| |||||||| ||||||||||||||||| |||
Sbjct: 205 actcccaacttgtgtgccaacaaacacgcgacaaggttaccgtcactgtagtttccaatg 146
Query: 1736 atcaggtcaggattggcctgaagctctccagcaatctcatgcgccacgtcatcagtgtaa 1795
||||||||||| |||||||| |||||||| || |||||||| ||||| ||||| ||||||
Sbjct: 145 atcaggtcagggttggcctgcagctctccggcgatctcatgtgccacatcatcggtgtaa 86
Query: 1796 gtctccaggtacggccagacttcaaatcgcgagatccacttgcgaacgattccgttttct 1855
| |||||||| |||||||||||||| || |||||||| || ||||| || || | ||||
Sbjct: 85 gcttccaggtaaggccagacttcaaaacgggagatccatttccgaacaataccatcttct 26
Query: 1856 gttctgaatggcacgcgaaggat 1878
||| |||||||||| || |||||
Sbjct: 25 gttttgaatggcacacgcaggat 3
Score = 75.8 bits (38), Expect = 8e-012
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 3145 ccaggagacacgatgttgaacttggggtcgaacacatcaatgccgtggac 3194
|||||||||||||||||||||||||||||||| |||||||| || |||||
Sbjct: 493 ccaggagacacgatgttgaacttggggtcgaagacatcaataccatggac 444
>gb|BQ460709.1|BQ460709 HA06C13r HA Hordeum vulgare subsp. vulgare cDNA clone HA06C13
5-PRIME, mRNA sequence
Length = 609
Score = 583 bits (294), Expect = e-164
Identities = 504/574 (87%)
Strand = Plus / Minus
Query: 1310 agctcctcaatctccgggtgaagggaggtcagcctcttgtgcgactcggtgtacgggaag 1369
|||||||||||||| | || |||||||| |||||||| ||| || ||||| ||||||
Sbjct: 583 agctcctcaatctcagtatggagggaggtaagcctcttctgctgttcagtgtatgggaag 524
Query: 1370 tagatggacaggtccgcgccaggagacacgatgttgaacttggggtcgaacacatcaatg 1429
|||||||||| ||| || |||||||||||||||||||||||||||||||| ||||||||
Sbjct: 523 tagatggacatgtcagcaccaggagacacgatgttgaacttggggtcgaagacatcaata 464
Query: 1430 ccgtggacaacgcggtacaggccaggcattgtgaacgccatgtgtgactcgtactggccg 1489
|| |||||||| || || ||||| ||||||||||| |||||||| ||||||||||| ||
Sbjct: 463 ccatggacaacacgatagaggcctggcattgtgaatgccatgtgcgactcgtactgccct 404
Query: 1490 acggtgtccttgtttccggcgatctcttggaaggtactggtgatgatgaagtcggcatgg 1549
|||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct: 403 acggtgtccttgtttccggcaatctcttggaaggtactggtgatgatgaagtcagcatgg 344
Query: 1550 ttcattgcaatcaagtcagtggtgaactggcacgagaagtggtagtgatcctcaaacttc 1609
||||||||||||| ||| | |||||||||||| ||||||||||||||||||||||| |||
Sbjct: 343 ttcattgcaatcaggtcggcggtgaactggcatgagaagtggtagtgatcctcaaatttc 284
Query: 1610 ttccagtagaggtcggagttagggtacttagttttctcaagcgcatgggcaatggtacag 1669
|||||||| |||||||| || || ||||| |||||||| |||||||| |||||||||||
Sbjct: 283 ttccagtaaaggtcggaattgggatacttggttttctcgagcgcatgagcaatggtacaa 224
Query: 1670 tgagtaacacccatcttgtgggcgagcaaacacgcaacaaggtttccgtcactgtagttt 1729
|||||||| |||| |||||| || | ||||||||| |||||||| |||||||||||||||
Sbjct: 223 tgagtaactcccaacttgtgtgccaacaaacacgcgacaaggttaccgtcactgtagttt 164
Query: 1730 ccgatgatcaggtcaggattggcctgaagctctccagcaatctcatgcgccacgtcatca 1789
|| |||||||||||||| |||||||| |||||||| || |||||||| ||||| |||||
Sbjct: 163 ccaatgatcaggtcagggttggcctgcagctctccggcgatctcatgtgccacatcatcg 104
Query: 1790 gtgtaagtctccaggtacggccagacttcaaatcgcgagatccacttgcgaacgattccg 1849
||||||| |||||||| |||||||||||||| || |||||||| || ||||| || ||
Sbjct: 103 gtgtaagcttccaggtaaggccagacttcaaaacgggagatccatttccgaacaatacca 44
Query: 1850 ttttctgttctgaatggcacgcgaaggatatggc 1883
| ||||||| |||||||||| || ||||| ||||
Sbjct: 43 tcttctgttttgaatggcacacgcaggatgtggc 10
Score = 75.8 bits (38), Expect = 8e-012
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 3145 ccaggagacacgatgttgaacttggggtcgaacacatcaatgccgtggac 3194
|||||||||||||||||||||||||||||||| |||||||| || |||||
Sbjct: 505 ccaggagacacgatgttgaacttggggtcgaagacatcaataccatggac 456
>gb|BU968793.1|BU968793 HB08J17r BC Hordeum vulgare subsp. vulgare cDNA clone HB08J17
5-PRIME, mRNA sequence
Length = 654
Score = 583 bits (294), Expect = e-164
Identities = 504/574 (87%)
Strand = Plus / Minus
Query: 1310 agctcctcaatctccgggtgaagggaggtcagcctcttgtgcgactcggtgtacgggaag 1369
|||||||||||||| | || |||||||| |||||||| ||| || ||||| ||||||
Sbjct: 607 agctcctcaatctcagtatggagggaggtaagcctcttctgctgttcagtgtatgggaag 548
Query: 1370 tagatggacaggtccgcgccaggagacacgatgttgaacttggggtcgaacacatcaatg 1429
|||||||||| ||| || |||||||||||||||||||||||||||||||| ||||||||
Sbjct: 547 tagatggacatgtcagcaccaggagacacgatgttgaacttggggtcgaagacatcaata 488
Query: 1430 ccgtggacaacgcggtacaggccaggcattgtgaacgccatgtgtgactcgtactggccg 1489
|| |||||||| || || ||||| ||||||||||| |||||||| ||||||||||| ||
Sbjct: 487 ccatggacaacacgatagaggcctggcattgtgaatgccatgtgcgactcgtactgccct 428
Query: 1490 acggtgtccttgtttccggcgatctcttggaaggtactggtgatgatgaagtcggcatgg 1549
|||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct: 427 acggtgtccttgtttccggcaatctcttggaaggtactggtgatgatgaagtcagcatgg 368
Query: 1550 ttcattgcaatcaagtcagtggtgaactggcacgagaagtggtagtgatcctcaaacttc 1609
||||||||||||| ||| | |||||||||||| ||||||||||||||||||||||| |||
Sbjct: 367 ttcattgcaatcaggtcggcggtgaactggcatgagaagtggtagtgatcctcaaatttc 308
Query: 1610 ttccagtagaggtcggagttagggtacttagttttctcaagcgcatgggcaatggtacag 1669
|||||||| |||||||| || || ||||| |||||||| |||||||| |||||||||||
Sbjct: 307 ttccagtaaaggtcggaattgggatacttggttttctcgagcgcatgagcaatggtacaa 248
Query: 1670 tgagtaacacccatcttgtgggcgagcaaacacgcaacaaggtttccgtcactgtagttt 1729
|||||||| |||| |||||| || | ||||||||| |||||||| |||||||||||||||
Sbjct: 247 tgagtaactcccaacttgtgtgccaacaaacacgcgacaaggttaccgtcactgtagttt 188
Query: 1730 ccgatgatcaggtcaggattggcctgaagctctccagcaatctcatgcgccacgtcatca 1789
|| |||||||||||||| |||||||| |||||||| || |||||||| ||||| |||||
Sbjct: 187 ccaatgatcaggtcagggttggcctgcagctctccggcgatctcatgtgccacatcatcg 128
Query: 1790 gtgtaagtctccaggtacggccagacttcaaatcgcgagatccacttgcgaacgattccg 1849
||||||| |||||||| |||||||||||||| || |||||||| || ||||| || ||
Sbjct: 127 gtgtaagcttccaggtaaggccagacttcaaaacgggagatccatttccgaacaatacca 68
Query: 1850 ttttctgttctgaatggcacgcgaaggatatggc 1883
| ||||||| |||||||||| || ||||| ||||
Sbjct: 67 tcttctgttttgaatggcacacgcaggatgtggc 34
Score = 75.8 bits (38), Expect = 8e-012
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 3145 ccaggagacacgatgttgaacttggggtcgaacacatcaatgccgtggac 3194
|||||||||||||||||||||||||||||||| |||||||| || |||||
Sbjct: 529 ccaggagacacgatgttgaacttggggtcgaagacatcaataccatggac 480
>gb|BQ459992.1|BQ459992 HA07I08r HA Hordeum vulgare subsp. vulgare cDNA clone HA07I08
5-PRIME, mRNA sequence
Length = 629
Score = 581 bits (293), Expect = e-164
Identities = 500/569 (87%)
Strand = Plus / Minus
Query: 1310 agctcctcaatctccgggtgaagggaggtcagcctcttgtgcgactcggtgtacgggaag 1369
|||||||||||||| | || |||||||| |||||||| ||| || ||||| ||||||
Sbjct: 582 agctcctcaatctcagtatggagggaggtaagcctcttctgctgttcagtgtatgggaag 523
Query: 1370 tagatggacaggtccgcgccaggagacacgatgttgaacttggggtcgaacacatcaatg 1429
|||||||||| ||| || |||||||||||||||||||||||||||||||| ||||||||
Sbjct: 522 tagatggacatgtcagcaccaggagacacgatgttgaacttggggtcgaagacatcaata 463
Query: 1430 ccgtggacaacgcggtacaggccaggcattgtgaacgccatgtgtgactcgtactggccg 1489
|| |||||||| || || ||||| ||||||||||| |||||||| ||||||||||| ||
Sbjct: 462 ccatggacaacacgatagaggcctggcattgtgaatgccatgtgcgactcgtactgccct 403
Query: 1490 acggtgtccttgtttccggcgatctcttggaaggtactggtgatgatgaagtcggcatgg 1549
|||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct: 402 acggtgtccttgtttccggcaatctcttggaaggtactggtgatgatgaagtcagcatgg 343
Query: 1550 ttcattgcaatcaagtcagtggtgaactggcacgagaagtggtagtgatcctcaaacttc 1609
||||||||||||| ||| | |||||||||||| ||||||||||||||||||||||| |||
Sbjct: 342 ttcattgcaatcaggtcggcggtgaactggcatgagaagtggtagtgatcctcaaatttc 283
Query: 1610 ttccagtagaggtcggagttagggtacttagttttctcaagcgcatgggcaatggtacag 1669
|||||||| |||||||| || || ||||| |||||||| |||||||| |||||||||||
Sbjct: 282 ttccagtaaaggtcggaattgggatacttggttttctcgagcgcatgagcaatggtacaa 223
Query: 1670 tgagtaacacccatcttgtgggcgagcaaacacgcaacaaggtttccgtcactgtagttt 1729
|||||||| |||| |||||| || | ||||||||| |||||||| |||||||||||||||
Sbjct: 222 tgagtaactcccaacttgtgtgccaacaaacacgcgacaaggttaccgtcactgtagttt 163
Query: 1730 ccgatgatcaggtcaggattggcctgaagctctccagcaatctcatgcgccacgtcatca 1789
|| |||||||||||||| |||||||| |||||||| || |||||||| ||||| |||||
Sbjct: 162 ccaatgatcaggtcagggttggcctgcagctctccggcgatctcatgtgccacatcatcg 103
Query: 1790 gtgtaagtctccaggtacggccagacttcaaatcgcgagatccacttgcgaacgattccg 1849
||||||| |||||||| |||||||||||||| || |||||||| || ||||| || ||
Sbjct: 102 gtgtaagcttccaggtaaggccagacttcaaaacgggagatccatttccgaacaatacca 43
Query: 1850 ttttctgttctgaatggcacgcgaaggat 1878
| ||||||| |||||||||| || |||||
Sbjct: 42 tcttctgttttgaatggcacacgcaggat 14
Score = 75.8 bits (38), Expect = 8e-012
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 3145 ccaggagacacgatgttgaacttggggtcgaacacatcaatgccgtggac 3194
|||||||||||||||||||||||||||||||| |||||||| || |||||
Sbjct: 504 ccaggagacacgatgttgaacttggggtcgaagacatcaataccatggac 455
>gb|AL508802.1|AL508802 AL508802 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY09N15V 5',
mRNA sequence
Length = 692
Score = 579 bits (292), Expect = e-163
Identities = 493/560 (88%)
Strand = Plus / Minus
Query: 1310 agctcctcaatctccgggtgaagggaggtcagcctcttgtgcgactcggtgtacgggaag 1369
|||||||||||||| | || |||||||| |||||||| ||| || ||||| ||||||
Sbjct: 577 agctcctcaatctcagtatggagggaggtaagcctcttctgctgttcagtgtatgggaag 518
Query: 1370 tagatggacaggtccgcgccaggagacacgatgttgaacttggggtcgaacacatcaatg 1429
|||||||||| ||| || |||||||||||||||||||||||||||||||| ||||||||
Sbjct: 517 tagatggacatgtcagcaccaggagacacgatgttgaacttggggtcgaagacatcaata 458
Query: 1430 ccgtggacaacgcggtacaggccaggcattgtgaacgccatgtgtgactcgtactggccg 1489
|| |||||||| || || ||||| ||||||||||| |||||||| ||||||||||| ||
Sbjct: 457 ccatggacaacacgatagaggcctggcattgtgaatgccatgtgcgactcgtactgccct 398
Query: 1490 acggtgtccttgtttccggcgatctcttggaaggtactggtgatgatgaagtcggcatgg 1549
|||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct: 397 acggtgtccttgtttccggcaatctcttggaaggtactggtgatgatgaagtcagcatgg 338
Query: 1550 ttcattgcaatcaagtcagtggtgaactggcacgagaagtggtagtgatcctcaaacttc 1609
||||||||||||| ||| | |||||||||||| ||||||||||||||||||||||| |||
Sbjct: 337 ttcattgcaatcaggtcggcggtgaactggcatgagaagtggtagtgatcctcaaatttc 278
Query: 1610 ttccagtagaggtcggagttagggtacttagttttctcaagcgcatgggcaatggtacag 1669
|||||||| |||||||| || || ||||| |||||||| |||||||| |||||||||||
Sbjct: 277 ttccagtaaaggtcggaattgggatacttggttttctcgagcgcatgagcaatggtacaa 218
Query: 1670 tgagtaacacccatcttgtgggcgagcaaacacgcaacaaggtttccgtcactgtagttt 1729
|||||||| |||| |||||| || | ||||||||| |||||||| |||||||||||||||
Sbjct: 217 tgagtaactcccaacttgtgtgccaacaaacacgcgacaaggttaccgtcactgtagttt 158
Query: 1730 ccgatgatcaggtcaggattggcctgaagctctccagcaatctcatgcgccacgtcatca 1789
|| |||||||||||||| |||||||| |||||||| || |||||||| ||||| |||||
Sbjct: 157 ccaatgatcaggtcagggttggcctgcagctctccggcgatctcatgtgccacatcatcg 98
Query: 1790 gtgtaagtctccaggtacggccagacttcaaatcgcgagatccacttgcgaacgattccg 1849
||||||| |||||||| |||||||||||||| || |||||||| || ||||| || ||
Sbjct: 97 gtgtaagcttccaggtaaggccagacttcaaaacgggagatccatttccgaacaatacca 38
Query: 1850 ttttctgttctgaatggcac 1869
| ||||||| ||||||||||
Sbjct: 37 tcttctgttttgaatggcac 18
Score = 75.8 bits (38), Expect = 8e-012
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 3145 ccaggagacacgatgttgaacttggggtcgaacacatcaatgccgtggac 3194
|||||||||||||||||||||||||||||||| |||||||| || |||||
Sbjct: 499 ccaggagacacgatgttgaacttggggtcgaagacatcaataccatggac 450
>gb|AL510063.1|AL510063 AL510063 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY03M07u 3',
mRNA sequence
Length = 700
Score = 579 bits (292), Expect = e-163
Identities = 565/652 (86%), Gaps = 3/652 (0%)
Strand = Plus / Minus
Query: 1536 tgaagtcggcatggttcattgcaatcaagtcagtggtgaactggcacgagaagtggtagt 1595
||||||| ||||||||||||||||||| ||| | |||||||||||| |||||||||||||
Sbjct: 652 tgaagtcagcatggttcattgcaatcaggtcggcggtgaactggcatgagaagtggtagt 593
Query: 1596 gatcctcaaacttctt-ccagtagaggtc-ggagttagggtacttagttttctcaagcgc 1653
||||||||| ||||| |||||| ||||| ||| || || ||||| |||||||| |||||
Sbjct: 592 aatcctcaaatttcttnccagtaaaggtccggaattgggatacttggttttctcgagcgc 533
Query: 1654 atgggcaatggtacagtgagtaacaccc-atcttgtgggcgagcaaacacgcaacaaggt 1712
||| ||||||||||| |||||||| ||| | |||||| || | ||||||||| |||||||
Sbjct: 532 atgagcaatggtacaatgagtaactccccaacttgtgtgccaacaaacacgcgacaaggt 473
Query: 1713 ttccgtcactgtagtttccgatgatcaggtcaggattggcctgaagctctccagcaatct 1772
| ||||||||||||||||| |||||||||||||| |||||||| |||||||| || ||||
Sbjct: 472 taccgtcactgtagtttccaatgatcaggtcagggttggcctgcagctctccggcgatct 413
Query: 1773 catgcgccacgtcatcagtgtaagtctccaggtacggccagacttcaaatcgcgagatcc 1832
|||| ||||| ||||| ||||||| |||||||| |||||||||||||| || |||||||
Sbjct: 412 catgtgccacatcatcggtgtaagcttccaggtaaggccagacttcaaaacgggagatcc 353
Query: 1833 acttgcgaacgattccgttttctgttctgaatggcacgcgaaggatatggcagtgctcgg 1892
| || ||||| || || | ||||||| |||||||||| || ||||| ||| ||||||||
Sbjct: 352 atttccgaacaataccatcttctgttttgaatggcacacgcaggatgtgggtgtgctcgg 293
Query: 1893 tgccaaggaccttctcaaggcgctggccacaggtggtgccagttgcatcagggagcaacc 1952
||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||
Sbjct: 292 tgccaaggaccttctcaaggcgctggccacaggtggtgccatgtgcatcagggagcatcc 233
Query: 1953 tggtgacaataaggatcttcggcgtgatgtcaagaccacactgcttgatcctcagcagca 2012
||||||| || || ||||| || || ||||| ||||| ||||||||| |||| |||||
Sbjct: 232 tggtgactattagaatctttggtgtaatgtcgagaccttgctgcttgattctcaacagca 173
Query: 2013 tttcgttctccatagcgcgcacttgatccaagatgtagacaacctggcctccggtgtcag 2072
| || ||||||||||| || ||||| ||||| |||||||||||||| || || || ||||
Sbjct: 172 tctcattctccatagcacggacttggtccaaaatgtagacaacctgtccgccagtatcag 113
Query: 2073 ggtaacccaagacattagcttgagcgaagtaaccatgaggggagaggataacgacattga 2132
|||| ||||||||||| || |||||||||||||||||||| ||||||||||| |||||||
Sbjct: 112 ggtaccccaagacattggcctgagcgaagtaaccatgaggagagaggataacaacattga 53
Query: 2133 acaccatggggatcgttccaaggaacttctccagggtggacggatctggggc 2184
||||||| ||||| ||||| ||||||||||||| || ||| ||||| |||||
Sbjct: 52 acaccattgggattgttccgaggaacttctccaaggaggatggatcaggggc 1
>gb|BI950121.1|BI950121 HVSMEl0018N18f Hordeum vulgare spike EST library HVcDNA0012 (Fusarium
infected) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEl0018N18f, mRNA sequence
Length = 881
Score = 579 bits (292), Expect = e-163
Identities = 585/683 (85%)
Strand = Plus / Minus
Query: 1196 accagcccagtcaagttcttcacacggtcgagacgagccatggagaagatgattggcttg 1255
||||| ||||||| ||||| |||||||| || | |||||| ||||||||||| |||||
Sbjct: 694 accaggccagtcatattcttaacacggtccagtctagccatcgagaagatgatcggcttc 635
Query: 1256 ttcctgtcgttcagaacgaacttgtgctccgtgttctcggtttggctgtacaggagctcc 1315
||| |||| |||| || || |||||||| | ||||| | ||| | || ||||||
Sbjct: 634 ttcttgtccttcaacacaaatttgtgctcagcattctcaacatcactgaatagtagctcc 575
Query: 1316 tcaatctccgggtgaagggaggtcagcctcttgtgcgactcggtgtacgggaagtagatg 1375
|||||||| | || |||||||| |||||||| ||| || ||||| || |||||||||
Sbjct: 574 tcaatctcagtatggagggaggtaagcctcttctgctgttcagtgtatggnaagtagatg 515
Query: 1376 gacaggtccgcgccaggagacacgatgttgaacttggggtcgaacacatcaatgccgtgg 1435
|||| ||| || |||||||||||||||||||||||||||||||| |||||||| || |||
Sbjct: 514 gacatgtcagcaccaggagacacgatgttgaacttggggtcgaagacatcaataccatgg 455
Query: 1436 acaacgcggtacaggccaggcattgtgaacgccatgtgtgactcgtactggccgacggtg 1495
||||| || || ||||| ||||||||||| |||||||| ||||||||||| || ||||||
Sbjct: 454 acaacacgatagaggcctggcattgtgaatgccatgtgcgactcgtactgccctacggtg 395
Query: 1496 tccttgtttccggcgatctcttggaaggtactggtgatgatgaagtcggcatggttcatt 1555
|||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 394 tccttgtttccggcaatctcttggaaggtactggtgatgatgaagtcagcatggttcatt 335
Query: 1556 gcaatcaagtcagtggtgaactggcacgagaagtggtagtgatcctcaaacttcttccag 1615
||||||| ||| | |||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 334 gcaatcaggtcggcggtgaactggcatgagaagtggtagtgatcctcaaatttcttccag 275
Query: 1616 tagaggtcggagttagggtacttagttttctcaagcgcatgggcaatggtacagtgagta 1675
|| |||||||| || || ||||| |||||||| |||||||| ||||||||||| ||||||
Sbjct: 274 taaaggtcggaattgggatacttggttttctcgagcgcatgagcaatggtacaatgagta 215
Query: 1676 acacccatcttgtgggcgagcaaacacgcaacaaggtttccgtcactgtagtttccgatg 1735
|| |||| |||||| || | ||||||||| |||||||| ||||||||||||||||| |||
Sbjct: 214 actcccaacttgtgtgccaacaaacacgcgacaaggttaccgtcactgtagtttccaatg 155
Query: 1736 atcaggtcaggattggcctgaagctctccagcaatctcatgcgccacgtcatcagtgtaa 1795
||||||||||| |||||||| |||||||| || |||||||| ||||| ||||| ||||||
Sbjct: 154 atcaggtcagggttggcctgcagctctccggcgatctcatgtgccacatcatcggtgtaa 95
Query: 1796 gtctccaggtacggccagacttcaaatcgcgagatccacttgcgaacgattccgttttct 1855
| |||||||| |||||||||||||| || |||||||| || ||||| || || | ||||
Sbjct: 94 gcttccaggtaaggccagacttcaaaacgggagatccatttccgaacaataccatcttct 35
Query: 1856 gttctgaatggcacgcgaaggat 1878
||| |||||||||| || |||||
Sbjct: 34 gttttgaatggcacacgcaggat 12
Score = 75.8 bits (38), Expect = 8e-012
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 3145 ccaggagacacgatgttgaacttggggtcgaacacatcaatgccgtggac 3194
|||||||||||||||||||||||||||||||| |||||||| || |||||
Sbjct: 502 ccaggagacacgatgttgaacttggggtcgaagacatcaataccatggac 453
>gb|BU973694.1|BU973694 HB25K18r BC Hordeum vulgare subsp. vulgare cDNA clone HB25K18
5-PRIME, mRNA sequence
Length = 602
Score = 579 bits (292), Expect = e-163
Identities = 493/560 (88%)
Strand = Plus / Minus
Query: 1310 agctcctcaatctccgggtgaagggaggtcagcctcttgtgcgactcggtgtacgggaag 1369
|||||||||||||| | || |||||||| |||||||| ||| || ||||| ||||||
Sbjct: 577 agctcctcaatctcagtatggagggaggtaagcctcttctgctgttcagtgtatgggaag 518
Query: 1370 tagatggacaggtccgcgccaggagacacgatgttgaacttggggtcgaacacatcaatg 1429
|||||||||| ||| || |||||||||||||||||||||||||||||||| ||||||||
Sbjct: 517 tagatggacatgtcagcaccaggagacacgatgttgaacttggggtcgaagacatcaata 458
Query: 1430 ccgtggacaacgcggtacaggccaggcattgtgaacgccatgtgtgactcgtactggccg 1489
|| |||||||| || || ||||| ||||||||||| |||||||| ||||||||||| ||
Sbjct: 457 ccatggacaacacgatagaggcctggcattgtgaatgccatgtgcgactcgtactgccct 398
Query: 1490 acggtgtccttgtttccggcgatctcttggaaggtactggtgatgatgaagtcggcatgg 1549
|||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct: 397 acggtgtccttgtttccggcaatctcttggaaggtactggtgatgatgaagtcagcatgg 338
Query: 1550 ttcattgcaatcaagtcagtggtgaactggcacgagaagtggtagtgatcctcaaacttc 1609
||||||||||||| ||| | |||||||||||| ||||||||||||||||||||||| |||
Sbjct: 337 ttcattgcaatcaggtcggcggtgaactggcatgagaagtggtagtgatcctcaaatttc 278
Query: 1610 ttccagtagaggtcggagttagggtacttagttttctcaagcgcatgggcaatggtacag 1669
|||||||| |||||||| || || ||||| |||||||| |||||||| |||||||||||
Sbjct: 277 ttccagtaaaggtcggaattgggatacttggttttctcgagcgcatgagcaatggtacaa 218
Query: 1670 tgagtaacacccatcttgtgggcgagcaaacacgcaacaaggtttccgtcactgtagttt 1729
|||||||| |||| |||||| || | ||||||||| |||||||| |||||||||||||||
Sbjct: 217 tgagtaactcccaacttgtgtgccaacaaacacgcgacaaggttaccgtcactgtagttt 158
Query: 1730 ccgatgatcaggtcaggattggcctgaagctctccagcaatctcatgcgccacgtcatca 1789
|| |||||||||||||| |||||||| |||||||| || |||||||| ||||| |||||
Sbjct: 157 ccaatgatcaggtcagggttggcctgcagctctccggcgatctcatgtgccacatcatcg 98
Query: 1790 gtgtaagtctccaggtacggccagacttcaaatcgcgagatccacttgcgaacgattccg 1849
||||||| |||||||| |||||||||||||| || |||||||| || ||||| || ||
Sbjct: 97 gtgtaagcttccaggtaaggccagacttcaaaacgggagatccatttccgaacaatacca 38
Query: 1850 ttttctgttctgaatggcac 1869
| ||||||| ||||||||||
Sbjct: 37 tcttctgttttgaatggcac 18
Score = 75.8 bits (38), Expect = 8e-012
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 3145 ccaggagacacgatgttgaacttggggtcgaacacatcaatgccgtggac 3194
|||||||||||||||||||||||||||||||| |||||||| || |||||
Sbjct: 499 ccaggagacacgatgttgaacttggggtcgaagacatcaataccatggac 450
>gb|BU987212.1|BU987212 HF14B23r HF Hordeum vulgare subsp. vulgare cDNA clone HF14B23
5-PRIME, mRNA sequence
Length = 596
Score = 579 bits (292), Expect = e-163
Identities = 493/560 (88%)
Strand = Plus / Minus
Query: 1310 agctcctcaatctccgggtgaagggaggtcagcctcttgtgcgactcggtgtacgggaag 1369
|||||||||||||| | || |||||||| |||||||| ||| || ||||| ||||||
Sbjct: 560 agctcctcaatctcagtatggagggaggtaagcctcttctgctgttcagtgtatgggaag 501
Query: 1370 tagatggacaggtccgcgccaggagacacgatgttgaacttggggtcgaacacatcaatg 1429
|||||||||| ||| || |||||||||||||||||||||||||||||||| ||||||||
Sbjct: 500 tagatggacatgtcagcaccaggagacacgatgttgaacttggggtcgaagacatcaata 441
Query: 1430 ccgtggacaacgcggtacaggccaggcattgtgaacgccatgtgtgactcgtactggccg 1489
|| |||||||| || || ||||| ||||||||||| |||||||| ||||||||||| ||
Sbjct: 440 ccatggacaacacgatagaggcctggcattgtgaatgccatgtgcgactcgtactgccct 381
Query: 1490 acggtgtccttgtttccggcgatctcttggaaggtactggtgatgatgaagtcggcatgg 1549
|||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct: 380 acggtgtccttgtttccggcaatctcttggaaggtactggtgatgatgaagtcagcatgg 321
Query: 1550 ttcattgcaatcaagtcagtggtgaactggcacgagaagtggtagtgatcctcaaacttc 1609
||||||||||||| ||| | |||||||||||| ||||||||||||||||||||||| |||
Sbjct: 320 ttcattgcaatcaggtcggcggtgaactggcatgagaagtggtagtgatcctcaaatttc 261
Query: 1610 ttccagtagaggtcggagttagggtacttagttttctcaagcgcatgggcaatggtacag 1669
|||||||| |||||||| || || ||||| |||||||| |||||||| |||||||||||
Sbjct: 260 ttccagtaaaggtcggaattgggatacttggttttctcgagcgcatgagcaatggtacaa 201
Query: 1670 tgagtaacacccatcttgtgggcgagcaaacacgcaacaaggtttccgtcactgtagttt 1729
|||||||| |||| |||||| || | ||||||||| |||||||| |||||||||||||||
Sbjct: 200 tgagtaactcccaacttgtgtgccaacaaacacgcgacaaggttaccgtcactgtagttt 141
Query: 1730 ccgatgatcaggtcaggattggcctgaagctctccagcaatctcatgcgccacgtcatca 1789
|| |||||||||||||| |||||||| |||||||| || |||||||| ||||| |||||
Sbjct: 140 ccaatgatcaggtcagggttggcctgcagctctccggcgatctcatgtgccacatcatcg 81
Query: 1790 gtgtaagtctccaggtacggccagacttcaaatcgcgagatccacttgcgaacgattccg 1849
||||||| |||||||| |||||||||||||| || |||||||| || ||||| || ||
Sbjct: 80 gtgtaagcttccaggtaaggccagacttcaaaacgggagatccatttccgaacaatacca 21
Query: 1850 ttttctgttctgaatggcac 1869
| ||||||| ||||||||||
Sbjct: 20 tcttctgttttgaatggcac 1
Score = 75.8 bits (38), Expect = 8e-012
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 3145 ccaggagacacgatgttgaacttggggtcgaacacatcaatgccgtggac 3194
|||||||||||||||||||||||||||||||| |||||||| || |||||
Sbjct: 482 ccaggagacacgatgttgaacttggggtcgaagacatcaataccatggac 433
>gb|CK122773.1|CK122773 BES1824105l14 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010L145 5-PRIME, mRNA sequence
Length = 720
Score = 573 bits (289), Expect = e-161
Identities = 499/569 (87%)
Strand = Plus / Minus
Query: 1310 agctcctcaatctccgggtgaagggaggtcagcctcttgtgcgactcggtgtacgggaag 1369
|||||||||||||| | || |||||||| |||||||| ||| || ||||| ||||||
Sbjct: 574 agctcctcaatctcagtatggagggaggtaagcctcttctgctgttcagtgtatgggaag 515
Query: 1370 tagatggacaggtccgcgccaggagacacgatgttgaacttggggtcgaacacatcaatg 1429
|||||||||| ||| || |||||||||||||||||||||||||||||||| ||||||||
Sbjct: 514 tagatggacatgtcagcaccaggagacacgatgttgaacttggggtcgaagacatcaata 455
Query: 1430 ccgtggacaacgcggtacaggccaggcattgtgaacgccatgtgtgactcgtactggccg 1489
|| |||||||| || || ||||| ||||||||||| |||||||| ||||||||||| ||
Sbjct: 454 ccatggacaacacgatagaggcctggcattgtgaatgccatgtgcgactcgtactgccct 395
Query: 1490 acggtgtccttgtttccggcgatctcttggaaggtactggtgatgatgaagtcggcatgg 1549
|||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct: 394 acggtgtccttgtttccggcaatctcttggaaggtactggtgatgatgaagtcagcatgg 335
Query: 1550 ttcattgcaatcaagtcagtggtgaactggcacgagaagtggtagtgatcctcaaacttc 1609
||||||||||||| || | |||||||||||| ||||||||||||||||||||||| |||
Sbjct: 334 ttcattgcaatcagatcggcggtgaactggcatgagaagtggtagtgatcctcaaatttc 275
Query: 1610 ttccagtagaggtcggagttagggtacttagttttctcaagcgcatgggcaatggtacag 1669
|||||||| |||||||| || || ||||| |||||||| |||||||| |||||||||||
Sbjct: 274 ttccagtaaaggtcggaattgggatacttggttttctcgagcgcatgagcaatggtacaa 215
Query: 1670 tgagtaacacccatcttgtgggcgagcaaacacgcaacaaggtttccgtcactgtagttt 1729
|||||||| |||| |||||| || | ||||||||| |||||||| |||||||||||||||
Sbjct: 214 tgagtaactcccaacttgtgtgccaacaaacacgcgacaaggttaccgtcactgtagttt 155
Query: 1730 ccgatgatcaggtcaggattggcctgaagctctccagcaatctcatgcgccacgtcatca 1789
|| |||||||||||||| |||||||| |||||||| || |||||||| ||||| |||||
Sbjct: 154 ccaatgatcaggtcagggttggcctgcagctctccggcgatctcatgtgccacatcatcg 95
Query: 1790 gtgtaagtctccaggtacggccagacttcaaatcgcgagatccacttgcgaacgattccg 1849
||||||| |||||||| |||||||||||||| || |||||||| || ||||| || ||
Sbjct: 94 gtgtaagcttccaggtaaggccagacttcaaaacgggagatccatttccgaacaatacca 35
Query: 1850 ttttctgttctgaatggcacgcgaaggat 1878
| ||||||| |||||||||| || |||||
Sbjct: 34 tcttctgttttgaatggcacacgcaggat 6
Score = 75.8 bits (38), Expect = 8e-012
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 3145 ccaggagacacgatgttgaacttggggtcgaacacatcaatgccgtggac 3194
|||||||||||||||||||||||||||||||| |||||||| || |||||
Sbjct: 496 ccaggagacacgatgttgaacttggggtcgaagacatcaataccatggac 447
>gb|BG415722.2|BG415722 HVSMEk0007J09f Hordeum vulgare testa/pericarp EST library HVcDNA0013
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEk0007J09f, mRNA sequence
Length = 651
Score = 569 bits (287), Expect = e-160
Identities = 496/566 (87%)
Strand = Plus / Minus
Query: 1313 tcctcaatctccgggtgaagggaggtcagcctcttgtgcgactcggtgtacgggaagtag 1372
||||||||||| | || |||||||| |||||||| ||| || ||||| |||||||||
Sbjct: 569 tcctcaatctcagtatggagggaggtaagcctcttctgctgttcagtgtatgggaagtag 510
Query: 1373 atggacaggtccgcgccaggagacacgatgttgaacttggggtcgaacacatcaatgccg 1432
||||||| ||| || |||||||||||||||||||||||||||||||| |||||||| ||
Sbjct: 509 atggacatgtcagcaccaggagacacgatgttgaacttggggtcgaagacatcaatacca 450
Query: 1433 tggacaacgcggtacaggccaggcattgtgaacgccatgtgtgactcgtactggccgacg 1492
|||||||| || || ||||| ||||||||||| |||||||| ||||||||||| | |||
Sbjct: 449 tggacaacacgatagaggcctggcattgtgaatgccatgtgcgactcgtactgccntacg 390
Query: 1493 gtgtccttgtttccggcgatctcttggaaggtactggtgatgatgaagtcggcatggttc 1552
||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 389 gtgtccttgtttccggcaatctcttggaaggtactggtgatgatgaagtcagcatggttc 330
Query: 1553 attgcaatcaagtcagtggtgaactggcacgagaagtggtagtgatcctcaaacttcttc 1612
|||||||||| ||| | |||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 329 attgcaatcaggtcggcggtgaactggcatgagaagtggtagtgatcctcaaatttcttc 270
Query: 1613 cagtagaggtcggagttagggtacttagttttctcaagcgcatgggcaatggtacagtga 1672
||||| |||||||| || || ||||| |||||||| |||||||| ||||||||||| |||
Sbjct: 269 cagtaaaggtcggaattgggatacttggttttctcgagcgcatgagcaatggtacaatga 210
Query: 1673 gtaacacccatcttgtgggcgagcaaacacgcaacaaggtttccgtcactgtagtttccg 1732
||||| |||| |||||| || | ||||||||| |||||||| |||||||||||||||||
Sbjct: 209 gtaactcccaacttgtgtgccaacaaacacgcgacaaggttaccgtcactgtagtttcca 150
Query: 1733 atgatcaggtcaggattggcctgaagctctccagcaatctcatgcgccacgtcatcagtg 1792
|||||||||||||| |||||||| |||||||| || |||||||| ||||| ||||| |||
Sbjct: 149 atgatcaggtcagggttggcctgcagctctccggcgatctcatgtgccacatcatcggtg 90
Query: 1793 taagtctccaggtacggccagacttcaaatcgcgagatccacttgcgaacgattccgttt 1852
|||| |||||||| |||||||||||||| || |||||||| || ||||| || || | |
Sbjct: 89 taagcttccaggtaaggccagacttcaaaacgggagatccatttccgaacaataccatct 30
Query: 1853 tctgttctgaatggcacgcgaaggat 1878
|||||| |||||||||| || |||||
Sbjct: 29 tctgttttgaatggcacacgcaggat 4
Score = 75.8 bits (38), Expect = 8e-012
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 3145 ccaggagacacgatgttgaacttggggtcgaacacatcaatgccgtggac 3194
|||||||||||||||||||||||||||||||| |||||||| || |||||
Sbjct: 494 ccaggagacacgatgttgaacttggggtcgaagacatcaataccatggac 445
>gb|BU969810.1|BU969810 HB12K17r BC Hordeum vulgare subsp. vulgare cDNA clone HB12K17
5-PRIME, mRNA sequence
Length = 543
Score = 567 bits (286), Expect = e-160
Identities = 466/526 (88%)
Strand = Plus / Minus
Query: 1358 gtgtacgggaagtagatggacaggtccgcgccaggagacacgatgttgaacttggggtcg 1417
||||| |||||||||||||||| ||| || ||||||||||||||||||||||||||||||
Sbjct: 535 gtgtatgggaagtagatggacatgtcagcaccaggagacacgatgttgaacttggggtcg 476
Query: 1418 aacacatcaatgccgtggacaacgcggtacaggccaggcattgtgaacgccatgtgtgac 1477
|| |||||||| || |||||||| || || ||||| ||||||||||| |||||||| |||
Sbjct: 475 aagacatcaataccatggacaacacgatagaggcctggcattgtgaatgccatgtgcgac 416
Query: 1478 tcgtactggccgacggtgtccttgtttccggcgatctcttggaaggtactggtgatgatg 1537
|||||||| || |||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 415 tcgtactgccctacggtgtccttgtttccggcaatctcttggaaggtactggtgatgatg 356
Query: 1538 aagtcggcatggttcattgcaatcaagtcagtggtgaactggcacgagaagtggtagtga 1597
||||| ||||||||||||||||||| ||| | |||||||||||| |||||||||||||||
Sbjct: 355 aagtcagcatggttcattgcaatcaggtcggcggtgaactggcatgagaagtggtagtga 296
Query: 1598 tcctcaaacttcttccagtagaggtcggagttagggtacttagttttctcaagcgcatgg 1657
|||||||| ||||||||||| |||||||| || || ||||| |||||||| ||||||||
Sbjct: 295 tcctcaaatttcttccagtaaaggtcggaattgggatacttggttttctcgagcgcatga 236
Query: 1658 gcaatggtacagtgagtaacacccatcttgtgggcgagcaaacacgcaacaaggtttccg 1717
||||||||||| |||||||| |||| |||||| || | ||||||||| |||||||| |||
Sbjct: 235 gcaatggtacaatgagtaactcccaacttgtgtgccaacaaacacgcgacaaggttaccg 176
Query: 1718 tcactgtagtttccgatgatcaggtcaggattggcctgaagctctccagcaatctcatgc 1777
|||||||||||||| |||||||||||||| |||||||| |||||||| || ||||||||
Sbjct: 175 tcactgtagtttccaatgatcaggtcagggttggcctgcagctctccggcgatctcatgt 116
Query: 1778 gccacgtcatcagtgtaagtctccaggtacggccagacttcaaatcgcgagatccacttg 1837
||||| ||||| ||||||| |||||||| |||||||||||||| || |||||||| ||
Sbjct: 115 gccacatcatcggtgtaagcttccaggtaaggccagacttcaaaacgggagatccatttc 56
Query: 1838 cgaacgattccgttttctgttctgaatggcacgcgaaggatatggc 1883
||||| || || | ||||||| |||||||||| || ||||| ||||
Sbjct: 55 cgaacaataccatcttctgttttgaatggcacacgcaggatgtggc 10
Score = 75.8 bits (38), Expect = 8e-012
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 3145 ccaggagacacgatgttgaacttggggtcgaacacatcaatgccgtggac 3194
|||||||||||||||||||||||||||||||| |||||||| || |||||
Sbjct: 505 ccaggagacacgatgttgaacttggggtcgaagacatcaataccatggac 456
>gb|BU966933.1|BU966933 HB02M23r BC Hordeum vulgare subsp. vulgare cDNA clone HB02M23
5-PRIME, mRNA sequence
Length = 555
Score = 565 bits (285), Expect = e-159
Identities = 462/521 (88%)
Strand = Plus / Minus
Query: 1358 gtgtacgggaagtagatggacaggtccgcgccaggagacacgatgttgaacttggggtcg 1417
||||| |||||||||||||||| ||| || ||||||||||||||||||||||||||||||
Sbjct: 536 gtgtatgggaagtagatggacatgtcagcaccaggagacacgatgttgaacttggggtcg 477
Query: 1418 aacacatcaatgccgtggacaacgcggtacaggccaggcattgtgaacgccatgtgtgac 1477
|| |||||||| || |||||||| || || ||||| ||||||||||| |||||||| |||
Sbjct: 476 aagacatcaataccatggacaacacgatagaggcctggcattgtgaatgccatgtgcgac 417
Query: 1478 tcgtactggccgacggtgtccttgtttccggcgatctcttggaaggtactggtgatgatg 1537
|||||||| || |||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 416 tcgtactgccctacggtgtccttgtttccggcaatctcttggaaggtactggtgatgatg 357
Query: 1538 aagtcggcatggttcattgcaatcaagtcagtggtgaactggcacgagaagtggtagtga 1597
||||| ||||||||||||||||||| ||| | |||||||||||| |||||||||||||||
Sbjct: 356 aagtcagcatggttcattgcaatcaggtcggcggtgaactggcatgagaagtggtagtga 297
Query: 1598 tcctcaaacttcttccagtagaggtcggagttagggtacttagttttctcaagcgcatgg 1657
|||||||| ||||||||||| |||||||| || || ||||| |||||||| ||||||||
Sbjct: 296 tcctcaaatttcttccagtaaaggtcggaattgggatacttggttttctcgagcgcatga 237
Query: 1658 gcaatggtacagtgagtaacacccatcttgtgggcgagcaaacacgcaacaaggtttccg 1717
||||||||||| |||||||| |||| |||||| || | ||||||||| |||||||| |||
Sbjct: 236 gcaatggtacaatgagtaactcccaacttgtgtgccaacaaacacgcgacaaggttaccg 177
Query: 1718 tcactgtagtttccgatgatcaggtcaggattggcctgaagctctccagcaatctcatgc 1777
|||||||||||||| |||||||||||||| |||||||| |||||||| || ||||||||
Sbjct: 176 tcactgtagtttccaatgatcaggtcagggttggcctgcagctctccggcgatctcatgt 117
Query: 1778 gccacgtcatcagtgtaagtctccaggtacggccagacttcaaatcgcgagatccacttg 1837
||||| ||||| ||||||| |||||||| |||||||||||||| || |||||||| ||
Sbjct: 116 gccacatcatcggtgtaagcttccaggtaaggccagacttcaaaacgggagatccatttc 57
Query: 1838 cgaacgattccgttttctgttctgaatggcacgcgaaggat 1878
||||| || || | ||||||| |||||||||| || |||||
Sbjct: 56 cgaacaataccatcttctgttttgaatggcacacgcaggat 16
Score = 75.8 bits (38), Expect = 8e-012
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 3145 ccaggagacacgatgttgaacttggggtcgaacacatcaatgccgtggac 3194
|||||||||||||||||||||||||||||||| |||||||| || |||||
Sbjct: 506 ccaggagacacgatgttgaacttggggtcgaagacatcaataccatggac 457
>gb|BI958492.1|BI958492 HVSMEn0015E21f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0015E21f,
mRNA sequence
Length = 645
Score = 561 bits (283), Expect = e-158
Identities = 494/564 (87%), Gaps = 3/564 (0%)
Strand = Plus / Minus
Query: 2413 gcgaaggaagttgagcaaggggtacatgctctccttgtcatggaagagctttgatgacag 2472
||| ||||||||||||| ||||| |||||| |||||||||||||||||||| || |||||
Sbjct: 645 gcgnaggaagttgagcagggggttcatgctttccttgtcatggaagagcttcgacgacag 586
Query: 2473 gtgcctgttgaggaactgcacgccattgccaatggactttgacagagaaggacgggggaa 2532
|||||||||||||||||||||||| ||||| |||||||| ||||| ||||| || |||||
Sbjct: 585 gtgcctgttgaggaactgcacgccgttgccgatggacttggacagggaagggcgagggaa 526
Query: 2533 ggaggcattgaatggctcaaagtccagctcaagaacaaagttgttgttggggccttcttc 2592
|||||| |||||||||||||||||||| ||||| ||||||| |||||| | | ||||
Sbjct: 525 ggaggcgttgaatggctcaaagtccagttcaagcacaaagtccttgttg---cttccttc 469
Query: 2593 cacaagctgttccttgaactgcaggtactcaggaactctcagctcctcaacagcgagctc 2652
||||||||||||||||||||||||||||||||| || ||| |||||| || ||||||||
Sbjct: 468 cacaagctgttccttgaactgcaggtactcagggacagtcaactcctcgacggcgagctc 409
Query: 2653 actgacgttgaccctcacatactcccagacaccaggcctagggcggatggcaagtgcaac 2712
|| ||||||||||||||||||||||||||||||||||| || ||||||||||| || ||
Sbjct: 408 gctcacgttgaccctcacatactcccagacaccaggccttggacggatggcaagcgcgac 349
Query: 2713 ccatggggggatgacaatcgcctcctgagctgccctcaggacatcctcaaaagcaccatc 2772
|||||| | |||||| ||||||||||| |||||||| || ||||||||||| || |||||
Sbjct: 348 ccatggcgagatgacgatcgcctcctgcgctgccctgagcacatcctcaaaggcgccatc 289
Query: 2773 cttgagcttctcgcgctcagcctcagggatcgcattgttgtactcggcaatgatctggtg 2832
|||||||||||||||||| ||||| ||||| || ||||||||| || |||||||||||
Sbjct: 288 cttgagcttctcgcgctctgcctcggggatggccgcgttgtactcagcgatgatctggtg 229
Query: 2833 gggctgcagcataccctttccaaggtttttcagcctggtgaagacggcgacaagctcatt 2892
|| ||||||||| || ||||||||||| || |||||||||||||||||| ||||| ||
Sbjct: 228 ggactgcagcattccatttccaaggttgaccaacctggtgaagacggcgacgagctcgtt 169
Query: 2893 ggggtgggcagagagtgagtcgccaatgcgctccctgacgctgtggaggcggctcaggac 2952
|||||| || ||||| |||||||| ||||||||||| ||||||||||||||||| |||||
Sbjct: 168 ggggtgcgcggagagggagtcgccgatgcgctccctaacgctgtggaggcggctgaggac 109
Query: 2953 acggtcacctgcaccttcccccat 2976
||||| || || ||||||||||
Sbjct: 108 gcggtcgccggcggcttcccccat 85
>gb|BE193575.3|BE193575 HVSMEh0081M04f Hordeum vulgare 5-45 DAP spike EST library HVcDNA0009
(5 to 45 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEh0081M04f, mRNA sequence
Length = 744
Score = 557 bits (281), Expect = e-157
Identities = 498/569 (87%), Gaps = 1/569 (0%)
Strand = Plus / Minus
Query: 1310 agctcctcaatctccgggtgaagggaggtcagcctcttgtgcgactcggtgtacgggaag 1369
|||||||||||||| | || ||| |||| |||||||| ||| || ||||| ||||||
Sbjct: 571 agctcctcaatctcagtatggaggaaggt-agcctcttctgctgttcagtgtatgggaag 513
Query: 1370 tagatggacaggtccgcgccaggagacacgatgttgaacttggggtcgaacacatcaatg 1429
|||||| ||| ||| || |||||||||||||||||||||||||||||||| ||||||||
Sbjct: 512 tagatgaacatgtcagcaccaggagacacgatgttgaacttggggtcgaagacatcaata 453
Query: 1430 ccgtggacaacgcggtacaggccaggcattgtgaacgccatgtgtgactcgtactggccg 1489
|| |||||||| || || ||||| ||||||||||| |||||||| ||||||||||| ||
Sbjct: 452 ccatggacaacacgatagaggcctggcattgtgaatgccatgtgcgactcgtactgccct 393
Query: 1490 acggtgtccttgtttccggcgatctcttggaaggtactggtgatgatgaagtcggcatgg 1549
|||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct: 392 acggtgtccttgtttccggcaatctcttggaaggtactggtgatgatgaagtcagcatgg 333
Query: 1550 ttcattgcaatcaagtcagtggtgaactggcacgagaagtggtagtgatcctcaaacttc 1609
||||||||||||| ||| | |||||||||||| ||||||||||||||||||||||| |||
Sbjct: 332 ttcattgcaatcaggtcggcggtgaactggcatgagaagtggtagtgatcctcaaatttc 273
Query: 1610 ttccagtagaggtcggagttagggtacttagttttctcaagcgcatgggcaatggtacag 1669
|||||||| |||||||| || || ||||| |||||||| |||||||| |||||||||||
Sbjct: 272 ttccagtaaaggtcggaattgggatacttggttttctcgagcgcatgagcaatggtacaa 213
Query: 1670 tgagtaacacccatcttgtgggcgagcaaacacgcaacaaggtttccgtcactgtagttt 1729
|||||||| |||| |||||| || | ||||||||| |||||||| |||||||||||||||
Sbjct: 212 tgagtaactcccaacttgtgtgccaacaaacacgcgacaaggttaccgtcactgtagttt 153
Query: 1730 ccgatgatcaggtcaggattggcctgaagctctccagcaatctcatgcgccacgtcatca 1789
|| |||||||||||||| |||||||| |||||||| || |||||||| ||||| |||||
Sbjct: 152 ccaatgatcaggtcagggttggcctgcagctctccggcgatctcatgtgccacatcatcg 93
Query: 1790 gtgtaagtctccaggtacggccagacttcaaatcgcgagatccacttgcgaacgattccg 1849
||||||| |||||||| |||||||||||||| || |||||||| || ||||| || ||
Sbjct: 92 gtgtaagcttccaggtaaggccagacttcaaaacgggagatccatttccgaacaatacca 33
Query: 1850 ttttctgttctgaatggcacgcgaaggat 1878
| ||||||| |||||||||| || |||||
Sbjct: 32 tcttctgttttgaatggcacacgcaggat 4
Score = 75.8 bits (38), Expect = 8e-012
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 3145 ccaggagacacgatgttgaacttggggtcgaacacatcaatgccgtggac 3194
|||||||||||||||||||||||||||||||| |||||||| || |||||
Sbjct: 494 ccaggagacacgatgttgaacttggggtcgaagacatcaataccatggac 445
Score = 48.1 bits (24), Expect = 0.002
Identities = 60/72 (83%)
Strand = Plus / Minus
Query: 1197 ccagcccagtcaagttcttcacacggtcgagacgagccatggagaagatgattggcttgt 1256
|||| ||||||| ||||| |||||||| || | |||||| ||||||||||| ||||| |
Sbjct: 684 ccaggccagtcatattcttgacacggtccagcctagccatcgagaagatgatcggcttct 625
Query: 1257 tcctgtcgttca 1268
|| |||| ||||
Sbjct: 624 tcttgtccttca 613
>gb|BU984072.1|BU984072 HA31O14r HA Hordeum vulgare subsp. vulgare cDNA clone HA31O14
5-PRIME, mRNA sequence
Length = 519
Score = 549 bits (277), Expect = e-154
Identities = 433/485 (89%)
Strand = Plus / Minus
Query: 1358 gtgtacgggaagtagatggacaggtccgcgccaggagacacgatgttgaacttggggtcg 1417
||||| |||||||||||||||| ||| || ||||||||||||||||||||||||||||||
Sbjct: 514 gtgtatgggaagtagatggacatgtcagcaccaggagacacgatgttgaacttggggtcg 455
Query: 1418 aacacatcaatgccgtggacaacgcggtacaggccaggcattgtgaacgccatgtgtgac 1477
|| |||||||| || |||||||| || || ||||| ||||||||||| |||||||| |||
Sbjct: 454 aagacatcaataccatggacaacacgatagaggcctggcattgtgaatgccatgtgcgac 395
Query: 1478 tcgtactggccgacggtgtccttgtttccggcgatctcttggaaggtactggtgatgatg 1537
|||||||| || |||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 394 tcgtactgccctacggtgtccttgtttccggcaatctcttggaaggtactggtgatgatg 335
Query: 1538 aagtcggcatggttcattgcaatcaagtcagtggtgaactggcacgagaagtggtagtga 1597
||||| ||||||||||||||||||| ||| | |||||||||||| |||||||||||||||
Sbjct: 334 aagtcagcatggttcattgcaatcaggtcggcggtgaactggcatgagaagtggtagtga 275
Query: 1598 tcctcaaacttcttccagtagaggtcggagttagggtacttagttttctcaagcgcatgg 1657
|||||||| ||||||||||| |||||||| || || ||||| |||||||| ||||||||
Sbjct: 274 tcctcaaatttcttccagtaaaggtcggaattgggatacttggttttctcgagcgcatga 215
Query: 1658 gcaatggtacagtgagtaacacccatcttgtgggcgagcaaacacgcaacaaggtttccg 1717
||||||||||| |||||||| |||| |||||| || | ||||||||| |||||||| |||
Sbjct: 214 gcaatggtacaatgagtaactcccaacttgtgtgccaacaaacacgcgacaaggttaccg 155
Query: 1718 tcactgtagtttccgatgatcaggtcaggattggcctgaagctctccagcaatctcatgc 1777
|||||||||||||| |||||||||||||| |||||||| |||||||| || ||||||||
Sbjct: 154 tcactgtagtttccaatgatcaggtcagggttggcctgcagctctccggcgatctcatgt 95
Query: 1778 gccacgtcatcagtgtaagtctccaggtacggccagacttcaaatcgcgagatccacttg 1837
||||| ||||| ||||||| |||||||| |||||||||||||| || |||||||| ||
Sbjct: 94 gccacatcatcggtgtaagcttccaggtaaggccagacttcaaaacgggagatccatttc 35
Query: 1838 cgaac 1842
|||||
Sbjct: 34 cgaac 30
Score = 75.8 bits (38), Expect = 8e-012
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 3145 ccaggagacacgatgttgaacttggggtcgaacacatcaatgccgtggac 3194
|||||||||||||||||||||||||||||||| |||||||| || |||||
Sbjct: 484 ccaggagacacgatgttgaacttggggtcgaagacatcaataccatggac 435
>gb|BE060290.2|BE060290 HVSMEg0011O01f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0011O01f, mRNA sequence
Length = 631
Score = 547 bits (276), Expect = e-154
Identities = 500/574 (87%), Gaps = 1/574 (0%)
Strand = Plus / Minus
Query: 1191 gctccaccagcccagtcaagttcttcacacggtcgagacgagccatggagaagatgattg 1250
|||| |||||||||||||||||||| |||||||| | |||||||||||||||||||||||
Sbjct: 573 gctcaaccagcccagtcaagttcttgacacggtccaaacgagccatggagaagatgattg 514
Query: 1251 gcttgttcctgtcgttcagaacgaacttgtgctccgtgttctcggtttggctgtacagga 1310
||||||||||||| || || || |||||||||| |||| ||| | ||||| || |
Sbjct: 513 gcttgttcctgtccttgagcacatacttgtgctcattgttgtcgacattactgtagagca 454
Query: 1311 gctcctcaatctccgggtgaagggaggtcagcctcttgtgcgactcggtgtacgggaagt 1370
||||||||||||| || || |||||||| |||||| | || || |||| ||| || ||||
Sbjct: 453 gctcctcaatctctgg-tggagggaggtgagcctcctctgtgattcggagtatggnaagt 395
Query: 1371 agatggacaggtccgcgccaggagacacgatgttgaacttggggtcgaacacatcaatgc 1430
||||| ||| |||||| ||||| || || ||||| |||||||||||||| ||||| || |
Sbjct: 394 agatgnacatgtccgcaccaggtgagactatgttaaacttggggtcgaaaacatcgatac 335
Query: 1431 cgtggacaacgcggtacaggccaggcattgtgaacgccatgtgtgactcgtactggccga 1490
| |||||||| ||||||| |||||||||||||| |||||||| ||||||||||| ||||
Sbjct: 334 catggacaacacggtacattccaggcattgtgaatgccatgtgagactcgtactgaccga 275
Query: 1491 cggtgtccttgtttccggcgatctcttggaaggtactggtgatgatgaagtcggcatggt 1550
|||||||||||||||| || |||||||||||||| || ||||||||||||||||||||||
Sbjct: 274 cggtgtccttgtttccagcaatctcttggaaggtgcttgtgatgatgaagtcggcatggt 215
Query: 1551 tcattgcaatcaagtcagtggtgaactggcacgagaagtggtagtgatcctcaaacttct 1610
|||| ||||||| ||| || ||||||||||| |||||||||||||| |||||||||||||
Sbjct: 214 tcatggcaatcaggtccgtagtgaactggcatgagaagtggtagtggtcctcaaacttct 155
Query: 1611 tccagtagaggtcggagttagggtacttagttttctcaagcgcatgggcaatggtacagt 1670
||||||||||||| ||||| |||||||| |||||||||||||| || ||||||||||| |
Sbjct: 154 tccagtagaggtcagagttggggtacttggttttctcaagcgcgtgcgcaatggtacaat 95
Query: 1671 gagtaacacccatcttgtgggcgagcaaacacgcaacaaggtttccgtcactgtagtttc 1730
||||||||||||||||||| || |||| || |||||||||||||| || ||||||||||
Sbjct: 94 gagtaacacccatcttgtgcgcaagcaggcaagcaacaaggtttccatcgctgtagtttc 35
Query: 1731 cgatgatcaggtcaggattggcctgaagctctcc 1764
||||||| || || ||||||||||| ||||||||
Sbjct: 34 cgatgatgagatcgggattggcctggagctctcc 1
>gb|CK124492.1|CK124492 BES1824109f19 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010F199 5-PRIME, mRNA sequence
Length = 610
Score = 543 bits (274), Expect = e-152
Identities = 522/599 (87%), Gaps = 5/599 (0%)
Strand = Plus / Minus
Query: 1396 cacgatgttgaacttgggg-tcgaacacatcaatgccgtggacaacgcggtacaggcca- 1453
||||||||||||||||||| ||||| |||||||| || ||| || | || || | |||
Sbjct: 609 cacgatgttgaacttggggntcgaagacatcaataccatggncancacgatagaagccct 550
Query: 1454 ggcattgtgaacgccatgtgtga-ctcgtactggccgacggtgtccttgttt-ccggcga 1511
||||||||||| |||||||| || ||||||||| || ||||||||||||||| ||| | |
Sbjct: 549 ggcattgtgaatgccatgtgcganctcgtactgccctacggtgtccttgttttccgncaa 490
Query: 1512 tctcttgg-aaggtactggtgatgatgaagtcggcatggttcattgcaatcaagtcagtg 1570
|||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||| | |
Sbjct: 489 tctcttggnaaggtactggtgatgatgaagtcagcatggttcattgcaatcaggtcggcg 430
Query: 1571 gtgaactggcacgagaagtggtagtgatcctcaaacttcttccagtagaggtcggagtta 1630
||||||||||| ||||||||||||||||||||||| ||||||||||| |||||||| ||
Sbjct: 429 gtgaactggcatgagaagtggtagtgatcctcaaatttcttccagtaaaggtcggaattg 370
Query: 1631 gggtacttagttttctcaagcgcatgggcaatggtacagtgagtaacacccatcttgtgg 1690
|| ||||| |||||||| |||||||| ||||||||||| |||||||| |||| ||||||
Sbjct: 369 ggatacttggttttctcgagcgcatgagcaatggtacaatgagtaactcccaacttgtgt 310
Query: 1691 gcgagcaaacacgcaacaaggtttccgtcactgtagtttccgatgatcaggtcaggattg 1750
|| | ||||||||| |||||||| ||||||||||||||||| |||||||||||||| |||
Sbjct: 309 gccaacaaacacgcgacaaggttaccgtcactgtagtttccaatgatcaggtcagggttg 250
Query: 1751 gcctgaagctctccagcaatctcatgcgccacgtcatcagtgtaagtctccaggtacggc 1810
||||| |||||||| || |||||||| ||||| ||||| ||||||| |||||||| |||
Sbjct: 249 gcctgcagctctccggcgatctcatgtgccacatcatcggtgtaagcttccaggtaaggc 190
Query: 1811 cagacttcaaatcgcgagatccacttgcgaacgattccgttttctgttctgaatggcacg 1870
||||||||||| || |||||||| || ||||| || || | ||||||| ||||||||||
Sbjct: 189 cagacttcaaaacgggagatccatttccgaacaataccatcttctgttttgaatggcaca 130
Query: 1871 cgaaggatatggcagtgctcggtgccaaggaccttctcaaggcgctggccacaggtggtg 1930
|| ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 cgcaggatgtgggtgtgctcggtgccaaggaccttctcaaggcgctggccacaggtggtg 70
Query: 1931 ccagttgcatcagggagcaacctggtgacaataaggatcttcggcgtgatgtcaagacc 1989
||| |||||||||||||| ||||||||| || || ||||| || || ||||| |||||
Sbjct: 69 ccatgtgcatcagggagcatcctggtgactattagaatctttggtgtaatgtcgagacc 11
Score = 44.1 bits (22), Expect = 0.028
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Minus
Query: 3153 cacgatgttgaacttgggg-tcgaacacatcaat 3185
||||||||||||||||||| ||||| ||||||||
Sbjct: 609 cacgatgttgaacttggggntcgaagacatcaat 576
>gb|CB883099.1|CB883099 HQ01D05w HQ Hordeum vulgare subsp. vulgare cDNA clone HQ01D05
3-PRIME, mRNA sequence
Length = 669
Score = 541 bits (273), Expect = e-152
Identities = 479/547 (87%), Gaps = 3/547 (0%)
Strand = Plus / Minus
Query: 2430 aggggtacatgctctccttgtcatggaagagctttgatgacaggtgcctgttgaggaact 2489
|||||| |||||| |||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 652 aggggttcatgctttccttgtcatggaagagcttcgacgacaggtgcctgttgaggaact 593
Query: 2490 gcacgccattgccaatggactttgacagagaaggacgggggaaggaggcattgaatggct 2549
||||||| ||||| |||||||| ||||| ||||| || ||||||||||| ||||||||||
Sbjct: 592 gcacgccgttgccgatggacttggacagggaagggcgagggaaggaggcgttgaatggct 533
Query: 2550 caaagtccagctcaagaacaaagttgttgttggggccttcttccacaagctgttccttga 2609
|||||||||| ||||| ||||||| |||||| | | |||||||||||||||||||||
Sbjct: 532 caaagtccagttcaagcacaaagtccttgttg---cttccttccacaagctgttccttga 476
Query: 2610 actgcaggtactcaggaactctcagctcctcaacagcgagctcactgacgttgaccctca 2669
|||||||||||||||| || ||| |||||| || |||||||| || |||||||||||||
Sbjct: 475 actgcaggtactcagggacagtcaactcctcgacggcgagctcgctcacgttgaccctca 416
Query: 2670 catactcccagacaccaggcctagggcggatggcaagtgcaacccatggggggatgacaa 2729
|||||||||||||||||||||| || ||||||||||| || |||||||| | |||||| |
Sbjct: 415 catactcccagacaccaggccttggacggatggcaagcgcgacccatggcgagatgacga 356
Query: 2730 tcgcctcctgagctgccctcaggacatcctcaaaagcaccatccttgagcttctcgcgct 2789
|||||||||| |||||||| || ||||||||||| || ||||||||||||||||||||||
Sbjct: 355 tcgcctcctgcgctgccctgagcacatcctcaaaggcgccatccttgagcttctcgcgct 296
Query: 2790 cagcctcagggatcgcattgttgtactcggcaatgatctggtggggctgcagcataccct 2849
| ||||| ||||| || ||||||||| || ||||||||||||| ||||||||| || |
Sbjct: 295 ctgcctcggggatggccgcgttgtactcagcgatgatctggtgggactgcagcattccat 236
Query: 2850 ttccaaggtttttcagcctggtgaagacggcgacaagctcattggggtgggcagagagtg 2909
|||||||||| || |||||||||||||||||| ||||| |||||||| || ||||| |
Sbjct: 235 ttccaaggttgaccaacctggtgaagacggcgacgagctcgttggggtgcgcggagaggg 176
Query: 2910 agtcgccaatgcgctccctgacgctgtggaggcggctcaggacacggtcacctgcacctt 2969
||||||| ||||||||||| ||||||||||||||||| ||||| ||||| || || |||
Sbjct: 175 agtcgccgatgcgctccctaacgctgtggaggcggctgaggacgcggtcgccggcggctt 116
Query: 2970 cccccat 2976
|||||||
Sbjct: 115 cccccat 109
>gb|BG415200.1|BG415200 HVSMEk0005I13f Hordeum vulgare testa/pericarp EST library HVcDNA0013
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEk0005I13f, mRNA sequence
Length = 928
Score = 533 bits (269), Expect = e-149
Identities = 548/641 (85%)
Strand = Plus / Minus
Query: 1202 ccagtcaagttcttcacacggtcgagacgagccatggagaagatgattggcttgttcctg 1261
||||||| ||||| |||||||| || | |||||| ||||||||||| ||||| |||||
Sbjct: 675 ccagtcatattcttgacacggtccagcctagccatcgagaagatgatcggcttcgtcctg 616
Query: 1262 tcgttcagaacgaacttgtgctccgtgttctcggtttggctgtacaggagctcctcaatc 1321
|| |||| || || |||||||| | ||||| | ||| | || ||||||||||||
Sbjct: 615 tccttcaacacaaatttgtgctcagcattctcaacatcactgaatagtagctcctcaatc 556
Query: 1322 tccgggtgaagggaggtcagcctcttgtgcgactcggtgtacgggaagtagatggacagg 1381
|| | || |||||||| |||||||||||| || ||||| |||||||||||||||| |
Sbjct: 555 tcagtatggagggaggtaagcctcttgtgctgttcagtgtatgggaagtagatggacatg 496
Query: 1382 tccgcgccaggagacacgatgttgaacttggggtcgaacacatcaatgccgtggacaacg 1441
|| || |||||||||||||||||||||||||||||||| |||||||| || ||||||||
Sbjct: 495 tcagcaccaggagacacgatgttgaacttggggtcgaagacatcaataccatggacaaca 436
Query: 1442 cggtacaggccaggcattgtgaacgccatgtgtgactcgtactggccgacggtgtccttg 1501
|| || ||||| ||||||||||| |||||||| ||||||||||| || ||||||||||||
Sbjct: 435 cgatagaggcctggcattgtgaatgccatgtgcgactcgtactgccctacggtgtccttg 376
Query: 1502 tttccggcgatctcttggaaggtactggtgatgatgaagtcggcatggttcattgcaatc 1561
|||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 375 tttccggcaatctcttggaaggtactggtgatgattaagtcagcatggttcattgcaatc 316
Query: 1562 aagtcagtggtgaactggcacgagaagtggtagtgatcctcaaacttcttccagtagagg 1621
| ||| | |||||||||||| ||||||||||||||||||||||| ||||||||||| |||
Sbjct: 315 aggtcggcggtgaactggcatgagaagtggtagtgatcctcaaatttcttccagtaaagg 256
Query: 1622 tcggagttagggtacttagttttctcaagcgcatgggcaatggtacagtgagtaacaccc 1681
||||| || | ||||| | |||||| |||||||| ||||||||||| |||||||| |||
Sbjct: 255 tcggaattggcatacttggctttctcgagcgcatgagcaatggtacaatgagtaactccc 196
Query: 1682 atcttgtgggcgagcaaacacgcaacaaggtttccgtcactgtagtttccgatgatcagg 1741
| |||||| || | ||||||||| |||||||| ||||||||||||||||| |||||||||
Sbjct: 195 aacttgtgtgccaacaaacacgcgacaaggttaccgtcactgtagtttccaatgatcagg 136
Query: 1742 tcaggattggcctgaagctctccagcaatctcatgcgccacgtcatcagtgtaagtctcc 1801
||||| |||||||| |||||||| || || ||||| ||||| ||||| |||| || |||
Sbjct: 135 tcagggttggcctgcagctctccggcgatgtcatgtgccacatcatcggtgtcagcttcc 76
Query: 1802 aggtacggccagacttcaaatcgcgagatccacttgcgaac 1842
||||| |||||||||||||| || |||||||| || |||||
Sbjct: 75 aggtaaggccagacttcaaaacgggagatccatttccgaac 35
Score = 75.8 bits (38), Expect = 8e-012
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 3145 ccaggagacacgatgttgaacttggggtcgaacacatcaatgccgtggac 3194
|||||||||||||||||||||||||||||||| |||||||| || |||||
Sbjct: 489 ccaggagacacgatgttgaacttggggtcgaagacatcaataccatggac 440
>gb|BI959550.1|BI959550 HVSMEn0020C12f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0020C12f,
mRNA sequence
Length = 653
Score = 527 bits (266), Expect = e-148
Identities = 531/618 (85%), Gaps = 1/618 (0%)
Strand = Plus / Minus
Query: 668 ccggtgagggtcatcagcctctccgagtacagcttcc-aggtgtacttctcctcgatacg 726
||||||||||||||||||||||| ||||| ||||||| ||||||| |||||||| |||||
Sbjct: 634 ccggtgagggtcatcagcctctcggagtaaagcttcccaggtgtatttctcctcaatacg 575
Query: 727 ctggagcccgccctgggagatcttgctccagtggctcggctccgcctggcacttgtcgaa 786
||| ||||| ||||| ||||||||| |||||||||| || || ||| |||||| || ||
Sbjct: 574 ctgaagccctccctgtgagatcttggtccagtggctggggtcgacctcgcacttctcaaa 515
Query: 787 gaagtccacgagcagggccgacgccttgtcgccctggtaagggtcgatgtggtagccaga 846
||| || || ||||| || || ||||||||||||||||||||||| ||||||||||| ||
Sbjct: 514 gaactcgacaagcagagcggaggccttgtcgccctggtaagggtcaatgtggtagccgga 455
Query: 847 cacgccgtgcacgatgatctcggccggaccgccgtaggctgtggcaaacgtgggcaggcc 906
||| |||| |||||||||||| || ||||| || || || || ||||| || || || ||
Sbjct: 454 cacaccgttcacgatgatctcagcaggaccaccatatgcagttgcaaaggtaggaagacc 395
Query: 907 gcaggtcatggcctcaaccaccgtcagcccgaaagcctcgtagaaagcaggctgcacgaa 966
||||||||||||||| | || || |||||||||||||| ||||||||||||||||| ||
Sbjct: 394 gcaggtcatggcctcgatgacagtaagcccgaaagcctcatagaaagcaggctgcacaaa 335
Query: 967 ggcgcccttggtgtcgcagatgtagcggtacagctcgccgttgcggacgcggttcatctg 1026
||| |||||||||||||||||||| ||||| ||||| | || ||||| |||||||||||
Sbjct: 334 ggcacccttggtgtcgcagatgtaacggtagagctcagcattacggacacggttcatctg 275
Query: 1027 ggcggagatccagcggatgtgcccgttcaggttgtactgctcgatgaggtcaaacatctt 1086
||||||||||||||||| || || ||||||||||||||||| || ||||| ||||||||
Sbjct: 274 ggcggagatccagcggacatggccattcaggttgtactgctcaataaggtcgaacatctt 215
Query: 1087 cttgaactcggcctgctcctccttgtccttggaagggttgccatggtcgccgcagacgac 1146
||||||||| |||||||||||||||||||| || || ||||||||||| || ||||| ||
Sbjct: 214 cttgaactcagcctgctcctccttgtcctttgatggattgccatggtcaccacagacaac 155
Query: 1147 cacgaggttcaccagctcctgcagccgcttgttccggccgtacagctccaccagcccagt 1206
||| ||||| || |||||||||| || |||| ||| |||||||| ||||| |||||
Sbjct: 154 cacaaggttaacaagctcctgcaagcgagggttcttgccatacagctcaaccagaccagt 95
Query: 1207 caagttcttcacacggtcgagacgagccatggagaagatgattggcttgttcctgtcgtt 1266
||||||||| |||||||| | |||||||||||||||||||||||||||||||||||| ||
Sbjct: 94 caagttcttgacacggtccaaacgagccatggagaagatgattggcttgttcctgtcctt 35
Query: 1267 cagaacgaacttgtgctc 1284
|| || ||||||||||
Sbjct: 34 gagcacatacttgtgctc 17
>gb|BQ464339.1|BQ464339 HF02A01r HF Hordeum vulgare subsp. vulgare cDNA clone HF02A01
5-PRIME, mRNA sequence
Length = 511
Score = 525 bits (265), Expect = e-147
Identities = 430/485 (88%)
Strand = Plus / Minus
Query: 1310 agctcctcaatctccgggtgaagggaggtcagcctcttgtgcgactcggtgtacgggaag 1369
|||||||||||||| | || |||||||| |||||||| ||| || ||||| ||||||
Sbjct: 495 agctcctcaatctcagtatggagggaggtaagcctcttctgctgttcagtgtatgggaag 436
Query: 1370 tagatggacaggtccgcgccaggagacacgatgttgaacttggggtcgaacacatcaatg 1429
|||||||||| ||| || |||||||||||||||||||||||||||||||| ||||||||
Sbjct: 435 tagatggacatgtcagcaccaggagacacgatgttgaacttggggtcgaagacatcaata 376
Query: 1430 ccgtggacaacgcggtacaggccaggcattgtgaacgccatgtgtgactcgtactggccg 1489
|| |||||||| || || ||||| ||||||||||| |||||||| ||||||||||| ||
Sbjct: 375 ccatggacaacacgatagaggcctggcattgtgaatgccatgtgcgactcgtactgccct 316
Query: 1490 acggtgtccttgtttccggcgatctcttggaaggtactggtgatgatgaagtcggcatgg 1549
|||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct: 315 acggtgtccttgtttccggcaatctcttggaaggtactggtgatgatgaagtcagcatgg 256
Query: 1550 ttcattgcaatcaagtcagtggtgaactggcacgagaagtggtagtgatcctcaaacttc 1609
||||||||||||| ||| | |||||||||||| ||||||||||||||||||||||| |||
Sbjct: 255 ttcattgcaatcaggtcggcggtgaactggcatgagaagtggtagtgatcctcaaatttc 196
Query: 1610 ttccagtagaggtcggagttagggtacttagttttctcaagcgcatgggcaatggtacag 1669
|||||||| |||||||| || || ||||| |||||||| |||||||| |||||||||||
Sbjct: 195 ttccagtaaaggtcggaattgggatacttggttttctcgagcgcatgagcaatggtacaa 136
Query: 1670 tgagtaacacccatcttgtgggcgagcaaacacgcaacaaggtttccgtcactgtagttt 1729
|||||||| |||| |||||| || | ||||||||| |||||||| |||||||||||||||
Sbjct: 135 tgagtaactcccaacttgtgtgccaacaaacacgcgacaaggttaccgtcactgtagttt 76
Query: 1730 ccgatgatcaggtcaggattggcctgaagctctccagcaatctcatgcgccacgtcatca 1789
|| |||||||||||||| |||||||| |||||||| || |||||||| ||||| |||||
Sbjct: 75 ccaatgatcaggtcagggttggcctgcagctctccggcgatctcatgtgccacatcatcg 16
Query: 1790 gtgta 1794
|||||
Sbjct: 15 gtgta 11
Score = 75.8 bits (38), Expect = 8e-012
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 3145 ccaggagacacgatgttgaacttggggtcgaacacatcaatgccgtggac 3194
|||||||||||||||||||||||||||||||| |||||||| || |||||
Sbjct: 417 ccaggagacacgatgttgaacttggggtcgaagacatcaataccatggac 368
>gb|BQ472643.1|BQ472643 HB01N19r BC Hordeum vulgare subsp. vulgare cDNA clone HB01N19
5-PRIME, mRNA sequence
Length = 572
Score = 521 bits (263), Expect = e-146
Identities = 487/562 (86%)
Strand = Plus / Minus
Query: 1650 gcgcatgggcaatggtacagtgagtaacacccatcttgtgggcgagcaaacacgcaacaa 1709
||||||| ||||||||||| |||||||| | || |||||| || | ||||||||| ||||
Sbjct: 572 gcgcatgagcaatggtacaatgagtaactcncaacttgtgtgccaacaaacacgcgacaa 513
Query: 1710 ggtttccgtcactgtagtttccgatgatcaggtcaggattggcctgaagctctccagcaa 1769
|||| ||||||||||||||||| |||||||||||||| |||||||| |||||||| || |
Sbjct: 512 ggttaccgtcactgtagtttccaatgatcaggtcagggttggcctgcagctctccggcga 453
Query: 1770 tctcatgcgccacgtcatcagtgtaagtctccaggtacggccagacttcaaatcgcgaga 1829
||||||| ||||| ||||| ||||||| |||||||| |||||||||||||| || ||||
Sbjct: 452 tctcatgtgccacatcatcggtgtaagcttccaggtaaggccagacttcaaaacgggaga 393
Query: 1830 tccacttgcgaacgattccgttttctgttctgaatggcacgcgaaggatatggcagtgct 1889
|||| || ||||| || || | ||||||| |||||||||| || ||||| ||| |||||
Sbjct: 392 tccatttccgaacaataccatcttctgttttgaatggcacacgcaggatgtgggtgtgct 333
Query: 1890 cggtgccaaggaccttctcaaggcgctggccacaggtggtgccagttgcatcagggagca 1949
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 332 cggtgccaaggaccttctcaaggcgctggccacaggtggtgccatgtgcatcagggagca 273
Query: 1950 acctggtgacaataaggatcttcggcgtgatgtcaagaccacactgcttgatcctcagca 2009
||||||||| || || ||||| || || ||||| ||||| ||||||||| |||| ||
Sbjct: 272 tcctggtgactattagaatctttggtgtaatgtcgagaccttgctgcttgattctcaaca 213
Query: 2010 gcatttcgttctccatagcgcgcacttgatccaagatgtagacaacctggcctccggtgt 2069
|||| || ||||||||||| || ||||| ||||| |||||||||||||| || || || |
Sbjct: 212 gcatctcattctccatagcacggacttggtccaaaatgtagacaacctgtccgccagtat 153
Query: 2070 cagggtaacccaagacattagcttgagcgaagtaaccatgaggggagaggataacgacat 2129
||||||| ||||||||||| || |||||||||||||||||||| ||||||||||| ||||
Sbjct: 152 cagggtaccccaagacattggcctgagcgaagtaaccatgaggagagaggataacaacat 93
Query: 2130 tgaacaccatggggatcgttccaaggaacttctccagggtggacggatctggggcctcca 2189
|||||||||| ||||| ||||| ||||||||||||| || ||| ||||| |||||||| |
Sbjct: 92 tgaacaccattgggattgttccgaggaacttctccaaggaggatggatcaggggcctcga 33
Query: 2190 ggaggtccaagaggaggtggat 2211
| ||||||||||| ||||||||
Sbjct: 32 gaaggtccaagagaaggtggat 11
>gb|AW983411.2|AW983411 HVSMEg0010I18f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0010I18f, mRNA sequence
Length = 799
Score = 513 bits (259), Expect = e-143
Identities = 476/547 (87%), Gaps = 1/547 (0%)
Strand = Plus / Minus
Query: 1187 tacagctccaccagcccagtcaagttcttcacacggtcgagacga-gccatggagaagat 1245
||||| || ||||| |||||||||||||| |||||||| | ||| |||| |||||||||
Sbjct: 627 tacaggtcaaccagaccagtcaagttcttgacacggtccaaccgaagccagggagaagat 568
Query: 1246 gattggcttgttcctgtcgttcagaacgaacttgtgctccgtgttctcggtttggctgta 1305
|||||||||||||||||| || || || |||||||||| |||| ||| | |||||
Sbjct: 567 gattggcttgttcctgtccttgagcacatacttgtgctcattgttgtcgacattactgta 508
Query: 1306 caggagctcctcaatctccgggtgaagggaggtcagcctcttgtgcgactcggtgtacgg 1365
|| |||||||||||||| ||||| |||||||| |||||| | || ||||||| ||| ||
Sbjct: 507 gagcagctcctcaatctctgggtggagggaggtgagcctcctctgtgactcggagtatgg 448
Query: 1366 gaagtagatggacaggtccgcgccaggagacacgatgttgaacttggggtcgaacacatc 1425
|||||||||||||| |||||| ||||| || || ||||| |||||||||||||| |||||
Sbjct: 447 gaagtagatggacatgtccgcaccaggtgagactatgttaaacttggggtcgaaaacatc 388
Query: 1426 aatgccgtggacaacgcggtacaggccaggcattgtgaacgccatgtgtgactcgtactg 1485
|| || |||||||| ||||||| |||||||||||||| |||||||| |||||||||||
Sbjct: 387 gataccatggacaacacggtacattccaggcattgtgaatgccatgtgagactcgtactg 328
Query: 1486 gccgacggtgtccttgtttccggcgatctcttggaaggtactggtgatgatgaagtcggc 1545
|||||||||||||||||||| || |||||||||||||| || |||||||||||||||||
Sbjct: 327 accgacggtgtccttgtttccagcaatctcttggaaggtgcttgtgatgatgaagtcggc 268
Query: 1546 atggttcattgcaatcaagtcagtggtgaactggcacgagaagtggtagtgatcctcaaa 1605
||||||||| ||||||| ||| || ||||||||||| |||||||||||||| ||||||||
Sbjct: 267 atggttcatggcaatcaggtccgtagtgaactggcatgagaagtggtagtggtcctcaaa 208
Query: 1606 cttcttccagtagaggtcggagttagggtacttagttttctcaagcgcatgggcaatggt 1665
|||||||||||||||||| ||||| |||||||| |||||||||||||| || ||||||||
Sbjct: 207 cttcttccagtagaggtcagagttggggtacttggttttctcaagcgcgtgcgcaatggt 148
Query: 1666 acagtgagtaacacccatcttgtgggcgagcaaacacgcaacaaggtttccgtcactgta 1725
||| |||||||||||||||||||| || |||| || |||||||||||||| || |||||
Sbjct: 147 acaatgagtaacacccatcttgtgcgcaagcaggcaagcaacaaggtttccatcgctgta 88
Query: 1726 gtttccg 1732
|||||||
Sbjct: 87 gtttccg 81
>gb|BU972845.1|BU972845 HB22O08r BC Hordeum vulgare subsp. vulgare cDNA clone HB22O08
5-PRIME, mRNA sequence
Length = 494
Score = 513 bits (259), Expect = e-143
Identities = 424/479 (88%)
Strand = Plus / Minus
Query: 1400 atgttgaacttggggtcgaacacatcaatgccgtggacaacgcggtacaggccaggcatt 1459
|||||||||||||||||||| |||||||| || |||||||| || || ||||| ||||||
Sbjct: 494 atgttgaacttggggtcgaagacatcaataccatggacaacacgatagaggcctggcatt 435
Query: 1460 gtgaacgccatgtgtgactcgtactggccgacggtgtccttgtttccggcgatctcttgg 1519
||||| |||||||| ||||||||||| || |||||||||||||||||||| |||||||||
Sbjct: 434 gtgaatgccatgtgcgactcgtactgccctacggtgtccttgtttccggcaatctcttgg 375
Query: 1520 aaggtactggtgatgatgaagtcggcatggttcattgcaatcaagtcagtggtgaactgg 1579
||||||||||||||||||||||| ||||||||||||||||||| ||| | ||||||||||
Sbjct: 374 aaggtactggtgatgatgaagtcagcatggttcattgcaatcaggtcggcggtgaactgg 315
Query: 1580 cacgagaagtggtagtgatcctcaaacttcttccagtagaggtcggagttagggtactta 1639
|| ||||||||||||||||||||||| ||||||||||| |||||||| || || |||||
Sbjct: 314 catgagaagtggtagtgatcctcaaatttcttccagtaaaggtcggaattgggatacttg 255
Query: 1640 gttttctcaagcgcatgggcaatggtacagtgagtaacacccatcttgtgggcgagcaaa 1699
|||||||| |||||||| ||||||||||| |||||||| |||| |||||| || | ||||
Sbjct: 254 gttttctcgagcgcatgagcaatggtacaatgagtaactcccaacttgtgtgccaacaaa 195
Query: 1700 cacgcaacaaggtttccgtcactgtagtttccgatgatcaggtcaggattggcctgaagc 1759
||||| |||||||| ||||||||||||||||| |||||||||||||| |||||||| |||
Sbjct: 194 cacgcgacaaggttaccgtcactgtagtttccaatgatcaggtcagggttggcctgcagc 135
Query: 1760 tctccagcaatctcatgcgccacgtcatcagtgtaagtctccaggtacggccagacttca 1819
||||| || |||||||| ||||| ||||| ||||||| |||||||| ||||||||||||
Sbjct: 134 tctccggcgatctcatgtgccacatcatcggtgtaagcttccaggtaaggccagacttca 75
Query: 1820 aatcgcgagatccacttgcgaacgattccgttttctgttctgaatggcacgcgaaggat 1878
|| || |||||||| || ||||| || || | ||||||| |||||||||| || |||||
Sbjct: 74 aaacgggagatccatttccgaacaataccatcttctgttttgaatggcacacgcaggat 16
Score = 52.0 bits (26), Expect = 1e-004
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 3157 atgttgaacttggggtcgaacacatcaatgccgtggac 3194
|||||||||||||||||||| |||||||| || |||||
Sbjct: 494 atgttgaacttggggtcgaagacatcaataccatggac 457
>gb|AL506883.1|AL506883 AL506883 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY04I11T 5',
mRNA sequence
Length = 548
Score = 502 bits (253), Expect = e-140
Identities = 463/533 (86%)
Strand = Plus / Minus
Query: 637 gttggacacgtacttccagaacccgtacacgccggtgagggtcatcagcctctccgagta 696
|||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct: 548 gttggagacgtacttccagaacccgtacacaccggtgagggtcatcagcctctcggagta 489
Query: 697 cagcttccaggtgtacttctcctcgatacgctggagcccgccctgggagatcttgctcca 756
|||||||||||||| |||||||| |||||||| ||||| ||||| ||||||||| ||||
Sbjct: 488 aagcttccaggtgtatttctcctcaatacgctgaagccctccctgtgagatcttggtcca 429
Query: 757 gtggctcggctccgcctggcacttgtcgaagaagtccacgagcagggccgacgccttgtc 816
|||||| || || ||| |||||| || ||||| || || ||||| || || ||||||||
Sbjct: 428 gtggctggggtcgacctcgcacttctcaaagaactcgacaagcagagcggaggccttgtc 369
Query: 817 gccctggtaagggtcgatgtggtagccagacacgccgtgcacgatgatctcggccggacc 876
||||||||||||||| ||||||||||| ||||| |||| |||||||||||| || |||||
Sbjct: 368 gccctggtaagggtcaatgtggtagccggacacaccgttcacgatgatctcagcaggacc 309
Query: 877 gccgtaggctgtggcaaacgtgggcaggccgcaggtcatggcctcaaccaccgtcagccc 936
|| || || || ||||| || || || ||||||||||||||||| | || || |||||
Sbjct: 308 accatatgcagttgcaaaggtaggaagaccgcaggtcatggcctcgatgacagtaagccc 249
Query: 937 gaaagcctcgtagaaagcaggctgcacgaaggcgcccttggtgtcgcagatgtagcggta 996
||||||||| ||||||||||||||||| ||||| |||||||||||||||||||| |||||
Sbjct: 248 gaaagcctcatagaaagcaggctgcacaaaggcacccttggtgtcgcagatgtaacggta 189
Query: 997 cagctcgccgttgcggacgcggttcatctgggcggagatccagcggatgtgcccgttcag 1056
||||| | || ||||| |||||||||||||||||||||||||||| || || |||||
Sbjct: 188 gagctcagcattacggacacggttcatctgggcggagatccagcggacatggccattcag 129
Query: 1057 gttgtactgctcgatgaggtcaaacatcttcttgaactcggcctgctcctccttgtcctt 1116
|||||||||||| || ||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 128 gttgtactgctcaataaggtcgaacatcttcttgaactcagcctgctcctccttgtcctt 69
Query: 1117 ggaagggttgccatggtcgccgcagacgaccacgaggttcaccagctcctgca 1169
|| || ||||||||||| || ||||| ||||| ||||| || ||||||||||
Sbjct: 68 tgatggattgccatggtcaccacagacaaccacaaggttaacaagctcctgca 16
>gb|AL510305.1|AL510305 AL510305 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY04I11u 3',
mRNA sequence
Length = 547
Score = 502 bits (253), Expect = e-140
Identities = 463/533 (86%)
Strand = Plus / Plus
Query: 637 gttggacacgtacttccagaacccgtacacgccggtgagggtcatcagcctctccgagta 696
|||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct: 1 gttggagacgtacttccagaacccgtacacaccggtgagggtcatcagcctctcggagta 60
Query: 697 cagcttccaggtgtacttctcctcgatacgctggagcccgccctgggagatcttgctcca 756
|||||||||||||| |||||||| |||||||| ||||| ||||| ||||||||| ||||
Sbjct: 61 aagcttccaggtgtatttctcctcaatacgctgaagccctccctgtgagatcttggtcca 120
Query: 757 gtggctcggctccgcctggcacttgtcgaagaagtccacgagcagggccgacgccttgtc 816
|||||| || || ||| |||||| || ||||| || || ||||| || || ||||||||
Sbjct: 121 gtggctggggtcgacctcgcacttctcaaagaactcgacaagcagagcggaggccttgtc 180
Query: 817 gccctggtaagggtcgatgtggtagccagacacgccgtgcacgatgatctcggccggacc 876
||||||||||||||| ||||||||||| ||||| |||| |||||||||||| || |||||
Sbjct: 181 gccctggtaagggtcaatgtggtagccggacacaccgttcacgatgatctcagcaggacc 240
Query: 877 gccgtaggctgtggcaaacgtgggcaggccgcaggtcatggcctcaaccaccgtcagccc 936
|| || || || ||||| || || || ||||||||||||||||| | || || |||||
Sbjct: 241 accatatgcagttgcaaaggtaggaagaccgcaggtcatggcctcgatgacagtaagccc 300
Query: 937 gaaagcctcgtagaaagcaggctgcacgaaggcgcccttggtgtcgcagatgtagcggta 996
||||||||| ||||||||||||||||| ||||| |||||||||||||||||||| |||||
Sbjct: 301 gaaagcctcatagaaagcaggctgcacaaaggcacccttggtgtcgcagatgtaacggta 360
Query: 997 cagctcgccgttgcggacgcggttcatctgggcggagatccagcggatgtgcccgttcag 1056
||||| | || ||||| |||||||||||||||||||||||||||| || || |||||
Sbjct: 361 gagctcagcattacggacacggttcatctgggcggagatccagcggacatggccattcag 420
Query: 1057 gttgtactgctcgatgaggtcaaacatcttcttgaactcggcctgctcctccttgtcctt 1116
|||||||||||| || ||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 421 gttgtactgctcaataaggtcgaacatcttcttgaactcagcctgctcctccttgtcctt 480
Query: 1117 ggaagggttgccatggtcgccgcagacgaccacgaggttcaccagctcctgca 1169
|| || ||||||||||| || ||||| ||||| ||||| || ||||||||||
Sbjct: 481 tgatggattgccatggtcaccacagacaaccacaaggttaacaagctcctgca 533
>gb|BU974376.1|BU974376 HB27L21r BC Hordeum vulgare subsp. vulgare cDNA clone HB27L21
5-PRIME, mRNA sequence
Length = 493
Score = 500 bits (252), Expect = e-139
Identities = 426/484 (88%)
Strand = Plus / Minus
Query: 1400 atgttgaacttggggtcgaacacatcaatgccgtggacaacgcggtacaggccaggcatt 1459
|||||||||||||||||||| |||||||| || ||| ||| || || ||||| ||||||
Sbjct: 493 atgttgaacttggggtcgaagacatcaataccatggcaaacacgatagaggcctggcatt 434
Query: 1460 gtgaacgccatgtgtgactcgtactggccgacggtgtccttgtttccggcgatctcttgg 1519
||||| |||||||| ||||||||||| || |||||||||||||||||||| |||||||||
Sbjct: 433 gtgaatgccatgtgcgactcgtactgccctacggtgtccttgtttccggcaatctcttgg 374
Query: 1520 aaggtactggtgatgatgaagtcggcatggttcattgcaatcaagtcagtggtgaactgg 1579
||||||||||||||||||||||| ||||||||||||||||||| ||| | ||||||||||
Sbjct: 373 aaggtactggtgatgatgaagtcagcatggttcattgcaatcaggtcggcggtgaactgg 314
Query: 1580 cacgagaagtggtagtgatcctcaaacttcttccagtagaggtcggagttagggtactta 1639
|| ||||||||||||||||||||||| ||||||||||| |||||||| || || |||||
Sbjct: 313 catgagaagtggtagtgatcctcaaatttcttccagtaaaggtcggaattgggatacttg 254
Query: 1640 gttttctcaagcgcatgggcaatggtacagtgagtaacacccatcttgtgggcgagcaaa 1699
|||||||| |||||||| ||||||||||| |||||||| |||| |||||| || | ||||
Sbjct: 253 gttttctcgagcgcatgagcaatggtacaatgagtaactcccaacttgtgtgccaacaaa 194
Query: 1700 cacgcaacaaggtttccgtcactgtagtttccgatgatcaggtcaggattggcctgaagc 1759
||||| |||||||| ||||||||||||||||| |||||||||||||| |||||||| |||
Sbjct: 193 cacgcgacaaggttaccgtcactgtagtttccaatgatcaggtcagggttggcctgcagc 134
Query: 1760 tctccagcaatctcatgcgccacgtcatcagtgtaagtctccaggtacggccagacttca 1819
||||| || |||||||| ||||| ||||| ||||||| |||||||| ||||||||||||
Sbjct: 133 tctccggcgatctcatgtgccacatcatcggtgtaagcttccaggtaaggccagacttca 74
Query: 1820 aatcgcgagatccacttgcgaacgattccgttttctgttctgaatggcacgcgaaggata 1879
|| || |||||||| || ||||| || || | ||||||| |||||||||| || |||||
Sbjct: 73 aaacgggagatccatttccgaacaataccatcttctgttttgaatggcacacgcaggatg 14
Query: 1880 tggc 1883
||||
Sbjct: 13 tggc 10
Score = 50.1 bits (25), Expect = 5e-004
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 3157 atgttgaacttggggtcgaacacatcaat 3185
|||||||||||||||||||| ||||||||
Sbjct: 493 atgttgaacttggggtcgaagacatcaat 465
>gb|BI960050.1|BI960050 HVSMEn0023A04f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0023A04f,
mRNA sequence
Length = 534
Score = 498 bits (251), Expect = e-139
Identities = 461/531 (86%)
Strand = Plus / Minus
Query: 639 tggacacgtacttccagaacccgtacacgccggtgagggtcatcagcctctccgagtaca 698
|||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |
Sbjct: 534 tggagacgtacttccagaacccgtacacaccggtgagggtcatcagcctctcggagtaaa 475
Query: 699 gcttccaggtgtacttctcctcgatacgctggagcccgccctgggagatcttgctccagt 758
||||||||||||| |||||||| |||||||| ||||| ||||| ||||||||| ||||||
Sbjct: 474 gcttccaggtgtatttctcctcaatacgctgaagccctccctgtgagatcttggtccagt 415
Query: 759 ggctcggctccgcctggcacttgtcgaagaagtccacgagcagggccgacgccttgtcgc 818
|||| || || ||| |||||| || ||||| || || ||||| || || ||||||||||
Sbjct: 414 ggctggggtcgacctcgcacttctcaaagaactcgacaagcagagcggaggccttgtcgc 355
Query: 819 cctggtaagggtcgatgtggtagccagacacgccgtgcacgatgatctcggccggaccgc 878
||||||||||||| ||||||||||| ||||| |||| |||||||||||| || ||||| |
Sbjct: 354 cctggtaagggtcaatgtggtagccggacacaccgttcacgatgatctcagcaggaccac 295
Query: 879 cgtaggctgtggcaaacgtgggcaggccgcaggtcatggcctcaaccaccgtcagcccga 938
| || || || ||||| || || || ||||||||||||||||| | || || |||||||
Sbjct: 294 catatgcagttgcaaaggtaggaagaccgcaggtcatggcctcgatgacagtaagcccga 235
Query: 939 aagcctcgtagaaagcaggctgcacgaaggcgcccttggtgtcgcagatgtagcggtaca 998
||||||| ||||||||||||||||| ||||| |||||||||||||||||||| ||||| |
Sbjct: 234 aagcctcatagaaagcaggctgcacaaaggcacccttggtgtcgcagatgtaacggtaga 175
Query: 999 gctcgccgttgcggacgcggttcatctgggcggagatccagcggatgtgcccgttcaggt 1058
|||| | || ||||| |||||||||||||||||||||||||||| || || |||||||
Sbjct: 174 gctcagcattacggacacggttcatctgggcggagatccagcggacatggccattcaggt 115
Query: 1059 tgtactgctcgatgaggtcaaacatcttcttgaactcggcctgctcctccttgtccttgg 1118
|||||||||| || ||||| ||||||||||||||||| |||||||||||||||||||| |
Sbjct: 114 tgtactgctcaataaggtcgaacatcttcttgaactcagcctgctcctccttgtcctttg 55
Query: 1119 aagggttgccatggtcgccgcagacgaccacgaggttcaccagctcctgca 1169
| || ||||||||||| || ||||| ||||| ||||| || ||||||||||
Sbjct: 54 atggattgccatggtcaccacagacaaccacaaggttaacaagctcctgca 4
>gb|BU971939.1|BU971939 HB20C02r BC Hordeum vulgare subsp. vulgare cDNA clone HB20C02
5-PRIME, mRNA sequence
Length = 485
Score = 498 bits (251), Expect = e-139
Identities = 417/471 (88%), Gaps = 1/471 (0%)
Strand = Plus / Minus
Query: 1400 atgttgaacttgggg-tcgaacacatcaatgccgtggacaacgcggtacaggccaggcat 1458
||||||||||||||| ||||| |||||||| || |||||||| || || ||||| |||||
Sbjct: 485 atgttgaacttgggggtcgaagacatcaataccatggacaacacgatagaggcctggcat 426
Query: 1459 tgtgaacgccatgtgtgactcgtactggccgacggtgtccttgtttccggcgatctcttg 1518
|||||| |||||||| ||||||||||| || |||||||||||||||||||| ||||||||
Sbjct: 425 tgtgaatgccatgtgcgactcgtactgccctacggtgtccttgtttccggcaatctcttg 366
Query: 1519 gaaggtactggtgatgatgaagtcggcatggttcattgcaatcaagtcagtggtgaactg 1578
|||||||||||||||||||||||| ||||||||||||||||||| ||| | |||||||||
Sbjct: 365 gaaggtactggtgatgatgaagtcagcatggttcattgcaatcaggtcggcggtgaactg 306
Query: 1579 gcacgagaagtggtagtgatcctcaaacttcttccagtagaggtcggagttagggtactt 1638
||| ||||||||||||||||||||||| ||||||||||| |||||||| || || |||||
Sbjct: 305 gcatgagaagtggtagtgatcctcaaatttcttccagtaaaggtcggaattgggatactt 246
Query: 1639 agttttctcaagcgcatgggcaatggtacagtgagtaacacccatcttgtgggcgagcaa 1698
|||||||| |||||||| ||||||||||| |||||||| |||| |||||| || | |||
Sbjct: 245 ggttttctcgagcgcatgagcaatggtacaatgagtaactcccaacttgtgtgccaacaa 186
Query: 1699 acacgcaacaaggtttccgtcactgtagtttccgatgatcaggtcaggattggcctgaag 1758
|||||| |||||||| ||||||||||||||||| |||||||||||||| |||||||| ||
Sbjct: 185 acacgcgacaaggttaccgtcactgtagtttccaatgatcaggtcagggttggcctgcag 126
Query: 1759 ctctccagcaatctcatgcgccacgtcatcagtgtaagtctccaggtacggccagacttc 1818
|||||| || |||||||| ||||| ||||| ||||||| |||||||| |||||||||||
Sbjct: 125 ctctccggcgatctcatgtgccacatcatcggtgtaagcttccaggtaaggccagacttc 66
Query: 1819 aaatcgcgagatccacttgcgaacgattccgttttctgttctgaatggcac 1869
||| || |||||||| || ||||| || || | ||||||| ||||||||||
Sbjct: 65 aaaacgggagatccatttccgaacaataccatcttctgttttgaatggcac 15
>gb|AL508931.1|AL508931 AL508931 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY10D14V 5',
mRNA sequence
Length = 700
Score = 490 bits (247), Expect = e-136
Identities = 580/686 (84%), Gaps = 4/686 (0%)
Strand = Plus / Minus
Query: 2081 aagacattagcttgagcgaagtaacc-atgaggggagaggataacgac-attgaacacc- 2137
|||||||| || |||||||||||||| ||||| | |||||||| | || ||||||||||
Sbjct: 687 aagacattggcctgagcgaagtaacccatgagag-agaggatancaaccattgaacaccc 629
Query: 2138 atggggatcgttccaaggaacttctccagggtggacggatctggggcctccaggaggtcc 2197
|| ||||| ||||| ||||||||||||| || ||| ||||| |||||||| || ||||||
Sbjct: 628 attgggattgttccgaggaacttctccaaggaggatggatcaggggcctcgagaaggtcc 569
Query: 2198 aagaggaggtggatagtctcctgtgcacgcttagcgcaatcaccccaacccttctccaga 2257
||||| |||||||||||||| ||||||| ||| || || ||||| || ||||||| |
Sbjct: 568 aagagaaggtggatagtctcgctcgcacgctgagcacagtcgccccagcctttctccaaa 509
Query: 2258 ccaagttcctggaacctgtggtgaaattcagagtatggggtatcagcttgtagggtggac 2317
|||||||||||||||| |||||| || || ||||| ||||| |||||| | ||| |||
Sbjct: 508 ccaagttcctggaaccggtggtggaactcggagtaaggggtgtcagctggaaggcctgac 449
Query: 2318 aggtgctcctcagccttcctcagcgcaccttgcagagcactgagactgcggattctgtcg 2377
|| || ||| |||||||| || |||||||| || | || ||||||||| ||||||||
Sbjct: 448 agatgtgtctctgccttcctgagtgcaccttggagggtaccgagactgcgaattctgtca 389
Query: 2378 ttcaacatcatggtcatccccttgtagttgtgggcgcgaaggaagttgagcaaggggtac 2437
|||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||
Sbjct: 388 ttcaacatcatggtcatccccttgtagttgtgcgcgcgaaggaagttaagcaatgggtac 329
Query: 2438 atgctctccttgtcatggaagagctttgatgacaggtgcctgttgaggaactgcacgcca 2497
||||||||||| |||||||| ||||| || |||| ||||||||| || |||||||| ||
Sbjct: 328 atgctctccttatcatggaacagcttcgacgacaagtgcctgttcagaaactgcacaccg 269
Query: 2498 ttgccaatggactttgacagagaaggacgggggaaggaggcattgaatggctcaaagtcc 2557
|||||||||||||| ||||| || || || ||||||||||| ||||||||| ||||||||
Sbjct: 268 ttgccaatggacttcgacagcgatgggcgtgggaaggaggcgttgaatggcccaaagtcc 209
Query: 2558 agctcaagaacaaagttgttgttggggccttcttccacaagctgttccttgaactgcagg 2617
|||||||| ||||||||||| | || || | | | | | || |||||||||||||||||
Sbjct: 208 agctcaagcacaaagttgttatcggtgcttccattcgccagttgttccttgaactgcaga 149
Query: 2618 tactcaggaactctcagctcctcaacagcgagctcactgacgttgaccctcacatactcc 2677
|||||||| || || | |||||||||| | ||||| || || ||||||||||||||||||
Sbjct: 148 tactcagggacgcttaactcctcaacaccaagctcgctcacattgaccctcacatactcc 89
Query: 2678 cagacaccaggcctagggcggatggcaagtgcaacccatggggggatgacaatcgcctcc 2737
||||| |||||||| || |||||||| || ||||||||||| ||||||||||| ||||||
Sbjct: 88 cagacgccaggccttggccggatggcgagagcaacccatggagggatgacaattgcctcc 29
Query: 2738 tgagctgccctcaggacatcctcaaa 2763
|| || |||| |||| |||||||||
Sbjct: 28 tgtgcgccccttaggagatcctcaaa 3
>gb|BU973029.1|BU973029 HB23I05r BC Hordeum vulgare subsp. vulgare cDNA clone HB23I05
5-PRIME, mRNA sequence
Length = 601
Score = 490 bits (247), Expect = e-136
Identities = 475/551 (86%)
Strand = Plus / Minus
Query: 1196 accagcccagtcaagttcttcacacggtcgagacgagccatggagaagatgattggcttg 1255
||||| ||||||| ||||| |||||||| || | |||||| ||||||||||| |||||
Sbjct: 562 accaggccagtcatattcttgacacggtccagcctagccatcgagaagatgatcggcttc 503
Query: 1256 ttcctgtcgttcagaacgaacttgtgctccgtgttctcggtttggctgtacaggagctcc 1315
||| |||| |||| || || |||||||| | ||||| | ||| | || ||||||
Sbjct: 502 ttcttgtccttcaacacaaatttgtgctcagcattctcaacatcactgaatagtagctcc 443
Query: 1316 tcaatctccgggtgaagggaggtcagcctcttgtgcgactcggtgtacgggaagtagatg 1375
|||||||| | || |||||||| |||||||| ||| || ||||| ||||||||||||
Sbjct: 442 tcaatctcagtatggagggaggtaagcctcttctgctgttcagtgtatgggaagtagatg 383
Query: 1376 gacaggtccgcgccaggagacacgatgttgaacttggggtcgaacacatcaatgccgtgg 1435
|||| ||| || |||||||||||||||||||||||||||||||| |||||||| || |||
Sbjct: 382 gacatgtcagcaccaggagacacgatgttgaacttggggtcgaagacatcaataccatgg 323
Query: 1436 acaacgcggtacaggccaggcattgtgaacgccatgtgtgactcgtactggccgacggtg 1495
||||| || || ||||| ||||||||||| |||||||| ||||||||||| || ||||||
Sbjct: 322 acaacacgatagaggcctggcattgtgaatgccatgtgcgactcgtactgccctacggtg 263
Query: 1496 tccttgtttccggcgatctcttggaaggtactggtgatgatgaagtcggcatggttcatt 1555
|||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 262 tccttgtttccggcaatctcttggaaggtactggtgatgatgaagtcagcatggttcatt 203
Query: 1556 gcaatcaagtcagtggtgaactggcacgagaagtggtagtgatcctcaaacttcttccag 1615
||||||| ||| | |||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 202 gcaatcaggtcggcggtgaactggcatgagaagtggtagtgatcctcaaatttcttccag 143
Query: 1616 tagaggtcggagttagggtacttagttttctcaagcgcatgggcaatggtacagtgagta 1675
|| |||||||| || || ||||| |||||||| |||||||| ||||||||||| ||||||
Sbjct: 142 taaaggtcggaattgggatacttggttttctcgagcgcatgagcaatggtacaatgagta 83
Query: 1676 acacccatcttgtgggcgagcaaacacgcaacaaggtttccgtcactgtagtttccgatg 1735
|| |||| |||||| || | ||||||||| |||||||| ||||||||||||||||| |||
Sbjct: 82 actcccaacttgtgtgccaacaaacacgcgacaaggttaccgtcactgtagtttccaatg 23
Query: 1736 atcaggtcagg 1746
|||||||||||
Sbjct: 22 atcaggtcagg 12
Score = 75.8 bits (38), Expect = 8e-012
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 3145 ccaggagacacgatgttgaacttggggtcgaacacatcaatgccgtggac 3194
|||||||||||||||||||||||||||||||| |||||||| || |||||
Sbjct: 370 ccaggagacacgatgttgaacttggggtcgaagacatcaataccatggac 321
>gb|BI949981.1|BI949981 HVSMEl0017H20f Hordeum vulgare spike EST library HVcDNA0012 (Fusarium
infected) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEl0017H20f, mRNA sequence
Length = 476
Score = 486 bits (245), Expect = e-135
Identities = 416/473 (87%)
Strand = Plus / Minus
Query: 1406 aacttggggtcgaacacatcaatgccgtggacaacgcggtacaggccaggcattgtgaac 1465
|||||||||||||| |||||||| || |||||||| || || ||||| |||||||||||
Sbjct: 476 aacttggggtcgaagacatcaataccatggacaacacgatagaggcctggcattgtgaat 417
Query: 1466 gccatgtgtgactcgtactggccgacggtgtccttgtttccggcgatctcttggaaggta 1525
|||||||| ||||||||||| || |||||||||||||||||||| |||||||||||||||
Sbjct: 416 gccatgtgcgactcgtactgccctacggtgtccttgtttccggcaatctcttggaaggta 357
Query: 1526 ctggtgatgatgaagtcggcatggttcattgcaatcaagtcagtggtgaactggcacgag 1585
||||||||||||||||| ||||||||||||||||||| ||| | |||||||||||| |||
Sbjct: 356 ctggtgatgatgaagtcagcatggttcattgcaatcaggtcggcggtgaactggcatgag 297
Query: 1586 aagtggtagtgatcctcaaacttcttccagtagaggtcggagttagggtacttagttttc 1645
|||||||||||||||||||| ||||||||||| |||||||| || || ||||| ||||||
Sbjct: 296 aagtggtagtgatcctcaaatttcttccagtaaaggtcggaattgggatacttggttttc 237
Query: 1646 tcaagcgcatgggcaatggtacagtgagtaacacccatcttgtgggcgagcaaacacgca 1705
|| |||||||| ||||||||||| |||||||| |||| |||||| || | |||||||||
Sbjct: 236 tcgagcgcatgagcaatggtacaatgagtaactcccaacttgtgtgccaacaaacacgcg 177
Query: 1706 acaaggtttccgtcactgtagtttccgatgatcaggtcaggattggcctgaagctctcca 1765
|||||||| ||||||||||||||||| |||||||||||||| |||||||| ||||||||
Sbjct: 176 acaaggttaccgtcactgtagtttccaatgatcaggtcagggttggcctgcagctctccg 117
Query: 1766 gcaatctcatgcgccacgtcatcagtgtaagtctccaggtacggccagacttcaaatcgc 1825
|| |||||||| ||||| ||||| ||||||| |||||||| |||||||||||||| ||
Sbjct: 116 gcgatctcatgtgccacatcatcggtgtaagcttccaggtaaggccagacttcaaaacgg 57
Query: 1826 gagatccacttgcgaacgattccgttttctgttctgaatggcacgcgaaggat 1878
|||||||| || || | || || | ||||||| |||||||||| || |||||
Sbjct: 56 gagatccatttccgcccaataccatcttctgttttgaatggcacacgcaggat 4
Score = 40.1 bits (20), Expect = 0.44
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 3163 aacttggggtcgaacacatcaatgccgtggac 3194
|||||||||||||| |||||||| || |||||
Sbjct: 476 aacttggggtcgaagacatcaataccatggac 445
>gb|BI958671.1|BI958671 HVSMEn0016C08f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0016C08f,
mRNA sequence
Length = 683
Score = 486 bits (245), Expect = e-135
Identities = 422/481 (87%)
Strand = Plus / Minus
Query: 563 acggtgctcgccatggtgcggtacttgagcgcgtacagcatctccaggtaccgccgggtc 622
|||||||| |||||||||||||||||||| |||||||||||||| ||||| || ||||||
Sbjct: 494 acggtgctggccatggtgcggtacttgagggcgtacagcatctcaaggtagcggcgggtc 435
Query: 623 tcgcgcctctccaggttggacacgtacttccagaacccgtacacgccggtgagggtcatc 682
||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 434 tcgcgcctctcgaggttggagacgtacttccagaacccgtacacaccggtgagggtcatc 375
Query: 683 agcctctccgagtacagcttccaggtgtacttctcctcgatacgctggagcccgccctgg 742
|||||||| ||||| |||||||||||||| |||||||| |||||||| ||||| |||||
Sbjct: 374 agcctctcggagtaaagcttccaggtgtatttctcctcaatacgctgaagccctccctgt 315
Query: 743 gagatcttgctccagtggctcggctccgcctggcacttgtcgaagaagtccacgagcagg 802
||||||||| |||||||||| || || ||| |||||| || ||||| || || |||||
Sbjct: 314 gagatcttggtccagtggctggggtcgacctcgcacttctcaaagaactcgacaagcaga 255
Query: 803 gccgacgccttgtcgccctggtaagggtcgatgtggtagccagacacgccgtgcacgatg 862
|| || ||||||||||||||||||||||| ||||||||||| ||||| |||| |||||||
Sbjct: 254 gcggaggccttgtcgccctggtaagggtcaatgtggtagccggacacaccgttcacgatg 195
Query: 863 atctcggccggaccgccgtaggctgtggcaaacgtgggcaggccgcaggtcatggcctca 922
||||| || ||||| || || || || ||||| || || || |||||||||||||||||
Sbjct: 194 atctcagcaggaccaccatatgcagttgcaaaggtaggaagaccgcaggtcatggcctcg 135
Query: 923 accaccgtcagcccgaaagcctcgtagaaagcaggctgcacgaaggcgcccttggtgtcg 982
| || || |||||||||||||| ||||||||||||||||| ||||| ||||||||||||
Sbjct: 134 atgacagtaagcccgaaagcctcatagaaagcaggctgcacaaaggcacccttggtgtcg 75
Query: 983 cagatgtagcggtacagctcgccgttgcggacgcggttcatctgggcggagatccagcgg 1042
|||||||| ||||| ||||| | || ||||| |||||||||||||||||||||||||||
Sbjct: 74 cagatgtaacggtagagctcagcattacggacacggttcatctgggcggagatccagcgg 15
Query: 1043 a 1043
|
Sbjct: 14 a 14
>gb|BE195797.3|BE195797 HVSMEh0090H19f Hordeum vulgare 5-45 DAP spike EST library HVcDNA0009
(5 to 45 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEh0090H19f, mRNA sequence
Length = 630
Score = 474 bits (239), Expect = e-132
Identities = 464/539 (86%)
Strand = Plus / Minus
Query: 1202 ccagtcaagttcttcacacggtcgagacgagccatggagaagatgattggcttgttcctg 1261
||||||| ||||| |||||||| || | |||||| ||||||||||| ||||| ||| ||
Sbjct: 539 ccagtcatattcttgacacggtccagcctagccatcgagaagatgatcggcttcttcttg 480
Query: 1262 tcgttcagaacgaacttgtgctccgtgttctcggtttggctgtacaggagctcctcaatc 1321
|| |||| || || |||||||| | ||||| | ||| | || ||||||||||||
Sbjct: 479 tccttcaacacaaatttgtgctcagcattctcaacatcactgaatagtagctcctcaatc 420
Query: 1322 tccgggtgaagggaggtcagcctcttgtgcgactcggtgtacgggaagtagatggacagg 1381
|| | || |||||||| |||||||| ||| || ||||| |||||||||||||||| |
Sbjct: 419 tcagtatggagggaggtaagcctcttctgctgttcagtgtatgggaagtagatggacatg 360
Query: 1382 tccgcgccaggagacacgatgttgaacttggggtcgaacacatcaatgccgtggacaacg 1441
|| || |||||||||||||||||||||||||||||||| |||||||| || ||||||||
Sbjct: 359 tcagcaccaggagacacgatgttgaacttggggtcgaagacatcaataccatggacaaca 300
Query: 1442 cggtacaggccaggcattgtgaacgccatgtgtgactcgtactggccgacggtgtccttg 1501
|| || ||||| ||||||||||| |||||||| ||||||||||| || ||||||||||||
Sbjct: 299 cgatagaggcctggcattgtgaatgccatgtgcgactcgtactgccctacggtgtccttg 240
Query: 1502 tttccggcgatctcttggaaggtactggtgatgatgaagtcggcatggttcattgcaatc 1561
|||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 239 tttccggcaatctcttggaaggtactggtgatgatgaagtcagcatggttcattgcaatc 180
Query: 1562 aagtcagtggtgaactggcacgagaagtggtagtgatcctcaaacttcttccagtagagg 1621
| ||| | |||||||||||| ||||||||||||||||||||||| ||||||||||| |||
Sbjct: 179 aggtcggcggtgaactggcatgagaagtggtagtgatcctcaaatttcttccagtaaagg 120
Query: 1622 tcggagttagggtacttagttttctcaagcgcatgggcaatggtacagtgagtaacaccc 1681
||||| || || ||||| |||||||| |||||||| ||||||||||| |||||||| |||
Sbjct: 119 tcggaattgggatacttggttttctcgagcgcatgagcaatggtacaatgagtaactccc 60
Query: 1682 atcttgtgggcgagcaaacacgcaacaaggtttccgtcactgtagtttccgatgatcag 1740
| |||||| || | ||||||||| |||||||| ||||||||||||||||| ||||||||
Sbjct: 59 aacttgtgtgccaacaaacacgcgacaaggttaccgtcactgtagtttccaatgatcag 1
Score = 75.8 bits (38), Expect = 8e-012
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 3145 ccaggagacacgatgttgaacttggggtcgaacacatcaatgccgtggac 3194
|||||||||||||||||||||||||||||||| |||||||| || |||||
Sbjct: 353 ccaggagacacgatgttgaacttggggtcgaagacatcaataccatggac 304
>gb|BU989940.1|BU989940 HF23E03r HF Hordeum vulgare subsp. vulgare cDNA clone HF23E03
5-PRIME, mRNA sequence
Length = 476
Score = 474 bits (239), Expect = e-132
Identities = 404/459 (88%)
Strand = Plus / Minus
Query: 1411 ggggtcgaacacatcaatgccgtggacaacgcggtacaggccaggcattgtgaacgccat 1470
||||||||| |||||||| || |||||||| || || ||||| ||||||||||| |||||
Sbjct: 476 ggggtcgaagacatcaataccatggacaacacgatagaggcctggcattgtgaatgccat 417
Query: 1471 gtgtgactcgtactggccgacggtgtccttgtttccggcgatctcttggaaggtactggt 1530
||| ||||||||||| || |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 416 gtgcgactcgtactgccctacggtgtccttgtttccggcaatctcttggaaggtactggt 357
Query: 1531 gatgatgaagtcggcatggttcattgcaatcaagtcagtggtgaactggcacgagaagtg 1590
|||||||||||| ||||||||||||||||||| ||| | |||||||||||| ||||||||
Sbjct: 356 gatgatgaagtcagcatggttcattgcaatcaggtcggcggtgaactggcatgagaagtg 297
Query: 1591 gtagtgatcctcaaacttcttccagtagaggtcggagttagggtacttagttttctcaag 1650
||||||||||||||| ||||||||||| |||||||| || || ||||| |||||||| ||
Sbjct: 296 gtagtgatcctcaaatttcttccagtaaaggtcggaattgggatacttggttttctcgag 237
Query: 1651 cgcatgggcaatggtacagtgagtaacacccatcttgtgggcgagcaaacacgcaacaag 1710
|||||| ||||||||||| |||||||| |||| |||||| || | ||||||||| |||||
Sbjct: 236 cgcatgagcaatggtacaatgagtaactcccaacttgtgtgccaacaaacacgcgacaag 177
Query: 1711 gtttccgtcactgtagtttccgatgatcaggtcaggattggcctgaagctctccagcaat 1770
||| ||||||||||||||||| |||| | ||||||| |||||||| |||||||| || ||
Sbjct: 176 gttaccgtcactgtagtttccaatgaacgggtcagggttggcctgcagctctccggcgat 117
Query: 1771 ctcatgcgccacgtcatcagtgtaagtctccaggtacggccagacttcaaatcgcgagat 1830
|||||| ||||| ||||| ||||||| |||||||| |||||||||||||| || |||||
Sbjct: 116 ctcatgtgccacatcatcggtgtaagcttccaggtaaggccagacttcaaaacgggagat 57
Query: 1831 ccacttgcgaacgattccgttttctgttctgaatggcac 1869
||| || ||||| || || | ||||||| ||||||||||
Sbjct: 56 ccatttccgaacaataccatcttctgttttgaatggcac 18
>gb|BE194218.3|BE194218 HVSMEh0084K16f Hordeum vulgare 5-45 DAP spike EST library HVcDNA0009
(5 to 45 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEh0084K16f, mRNA sequence
Length = 632
Score = 470 bits (237), Expect = e-130
Identities = 451/521 (86%), Gaps = 2/521 (0%)
Strand = Plus / Minus
Query: 1358 gtgtacgggaagtagatggacaggtccgcgccaggagacacgatgttgaacttggggtcg 1417
||||| || ||||||||| ||| ||| || |||| ||||||||||||||||||||| |||
Sbjct: 522 gtgtatggaaagtagatgnacatgtcagcaccagaagacacgatgttgaacttggg-tcg 464
Query: 1418 aacacatcaatgccgtggacaacgcggtacaggccaggcattgtgaacgccatgtgtgac 1477
|| |||||||| || ||| || | || ||||| ||||| |||| |||||||| |||
Sbjct: 463 aagacatcaataccatggcacacn-gatagaggcctggcatgntgaatgccatgtgcgac 405
Query: 1478 tcgtactggccgacggtgtccttgtttccggcgatctcttggaaggtactggtgatgatg 1537
|||||||| || ||||||||||||| |||||| |||||||||||||||||||||||||||
Sbjct: 404 tcgtactgccctacggtgtccttgtntccggcaatctcttggaaggtactggtgatgatg 345
Query: 1538 aagtcggcatggttcattgcaatcaagtcagtggtgaactggcacgagaagtggtagtga 1597
||||| ||||||||||||||||||| ||| | |||||||||||| |||||||||||||||
Sbjct: 344 aagtcagcatggttcattgcaatcaggtcggcggtgaactggcatgagaagtggtagtga 285
Query: 1598 tcctcaaacttcttccagtagaggtcggagttagggtacttagttttctcaagcgcatgg 1657
|||||||| ||||||||||| |||||||| || || ||||| |||||||| ||||||||
Sbjct: 284 tcctcaaatttcttccagtaaaggtcggaattgggatacttggttttctcgagcgcatga 225
Query: 1658 gcaatggtacagtgagtaacacccatcttgtgggcgagcaaacacgcaacaaggtttccg 1717
||||||||||| |||||||| |||| |||||| || | ||||||||| |||||||| |||
Sbjct: 224 gcaatggtacaatgagtaactcccaacttgtgtgccaacaaacacgcgacaaggttaccg 165
Query: 1718 tcactgtagtttccgatgatcaggtcaggattggcctgaagctctccagcaatctcatgc 1777
|||||||||||||| |||||||||||||| |||||||| |||||||| || ||||||||
Sbjct: 164 tcactgtagtttccaatgatcaggtcagggttggcctgcagctctccggcgatctcatgt 105
Query: 1778 gccacgtcatcagtgtaagtctccaggtacggccagacttcaaatcgcgagatccacttg 1837
||||| ||||| ||||||| |||||||| |||||||||||||| || |||||||| ||
Sbjct: 104 gccacatcatcggtgtaagcttccaggtaaggccagacttcaaaacgggagatccatttc 45
Query: 1838 cgaacgattccgttttctgttctgaatggcacgcgaaggat 1878
||||| || || | ||||||| |||||||||| || |||||
Sbjct: 44 cgaacaataccatcttctgttttgaatggcacacgcaggat 4
Score = 50.1 bits (25), Expect = 5e-004
Identities = 38/41 (92%), Gaps = 1/41 (2%)
Strand = Plus / Minus
Query: 3145 ccaggagacacgatgttgaacttggggtcgaacacatcaat 3185
|||| |||||||||||||||||| |||||||| ||||||||
Sbjct: 492 ccagaagacacgatgttgaactt-gggtcgaagacatcaat 453
>gb|BQ472946.1|BQ472946 HB01A03r BC Hordeum vulgare subsp. vulgare cDNA clone HB01A03
5-PRIME, mRNA sequence
Length = 622
Score = 464 bits (234), Expect = e-129
Identities = 507/598 (84%)
Strand = Plus / Minus
Query: 1076 tcaaacatcttcttgaactcggcctgctcctccttgtccttggaagggttgccatggtcg 1135
|||||||||||||||||||| || |||||||||||||||||||| || ||||||||
Sbjct: 608 tcaaacatcttcttgaactctgcttgctcctccttgtccttggacacctttccatggtca 549
Query: 1136 ccgcagacgaccacgaggttcaccagctcctgcagccgcttgttccggccgtacagctcc 1195
|| ||||| ||||| ||||| ||||||||||| || || ||||| || |||| ||
Sbjct: 548 ccacagacaaccaccaggtttaccagctcctgtaggcgaggattccgcccatacatttct 489
Query: 1196 accagcccagtcaagttcttcacacggtcgagacgagccatggagaagatgattggcttg 1255
||||| ||||||| ||||| |||||||| || | |||||| ||||||||||| |||||
Sbjct: 488 accaggccagtcatattcttgacacggtccagcctagccatcgagaagatgatcggcttc 429
Query: 1256 ttcctgtcgttcagaacgaacttgtgctccgtgttctcggtttggctgtacaggagctcc 1315
||| |||| |||| || || |||||||| | ||||| | ||| | || ||||||
Sbjct: 428 ttcttgtccttcaacacaaatttgtgctcagcattctcaacatcactgaatagtagctcc 369
Query: 1316 tcaatctccgggtgaagggaggtcagcctcttgtgcgactcggtgtacgggaagtagatg 1375
|||||||| | || |||||||| |||||||| ||| || ||||| ||||||||||||
Sbjct: 368 tcaatctcagtatggagggaggtaagcctcttctgctgttcagtgtatgggaagtagatg 309
Query: 1376 gacaggtccgcgccaggagacacgatgttgaacttggggtcgaacacatcaatgccgtgg 1435
|||| ||| || |||||||||||||||||||||||||||||||| |||||||| || |||
Sbjct: 308 gacatgtcagcaccaggagacacgatgttgaacttggggtcgaagacatcaataccatgg 249
Query: 1436 acaacgcggtacaggccaggcattgtgaacgccatgtgtgactcgtactggccgacggtg 1495
||||| || || ||||| ||||||||||| |||||||| ||||||||||| || ||||||
Sbjct: 248 acaacacgatagaggcctggcattgtgaatgccatgtgcgactcgtactgccctacggtg 189
Query: 1496 tccttgtttccggcgatctcttggaaggtactggtgatgatgaagtcggcatggttcatt 1555
|||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 188 tccttgtttccggcaatctcttggaaggtactggtgatgatgaagtcagcatggttcatt 129
Query: 1556 gcaatcaagtcagtggtgaactggcacgagaagtggtagtgatcctcaaacttcttccag 1615
||||||| ||| | |||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 128 gcaatcaggtcggcggtgaactggcatgagaagtggtagtgatcctcaaatttcttccag 69
Query: 1616 tagaggtcggagttagggtacttagttttctcaagcgcatgggcaatggtacagtgag 1673
|| |||||||| || || ||||| |||||||| |||||||| ||||||||||| ||||
Sbjct: 68 taaaggtcggaattgggatacttggttttctcgagcgcatgagcaatggtacaatgag 11
Score = 75.8 bits (38), Expect = 8e-012
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 3145 ccaggagacacgatgttgaacttggggtcgaacacatcaatgccgtggac 3194
|||||||||||||||||||||||||||||||| |||||||| || |||||
Sbjct: 296 ccaggagacacgatgttgaacttggggtcgaagacatcaataccatggac 247
>gb|BU979768.1|BU979768 HA17D17r HA Hordeum vulgare subsp. vulgare cDNA clone HA17D17
5-PRIME, mRNA sequence
Length = 443
Score = 464 bits (234), Expect = e-129
Identities = 381/430 (88%)
Strand = Plus / Minus
Query: 1454 ggcattgtgaacgccatgtgtgactcgtactggccgacggtgtccttgtttccggcgatc 1513
||||||||||| |||||||| ||||||||||| || |||||||||||||||||||| |||
Sbjct: 439 ggcattgtgaatgccatgtgcgactcgtactgccctacggtgtccttgtttccggcaatc 380
Query: 1514 tcttggaaggtactggtgatgatgaagtcggcatggttcattgcaatcaagtcagtggtg 1573
||||||||||||||||||||||||||||| ||||||||||||||||||| ||| | ||||
Sbjct: 379 tcttggaaggtactggtgatgatgaagtcagcatggttcattgcaatcaggtcggcggtg 320
Query: 1574 aactggcacgagaagtggtagtgatcctcaaacttcttccagtagaggtcggagttaggg 1633
|||||||| ||||||||||||||||||||||| ||||||||||| |||||||| || ||
Sbjct: 319 aactggcatgagaagtggtagtgatcctcaaatttcttccagtaaaggtcggaattggga 260
Query: 1634 tacttagttttctcaagcgcatgggcaatggtacagtgagtaacacccatcttgtgggcg 1693
||||| |||||||| |||||||| ||||||||||| |||||||| |||| |||||| ||
Sbjct: 259 tacttggttttctcgagcgcatgagcaatggtacaatgagtaactcccaacttgtgtgcc 200
Query: 1694 agcaaacacgcaacaaggtttccgtcactgtagtttccgatgatcaggtcaggattggcc 1753
| ||||||||| |||||||| ||||||||||||||||| |||||||||||||| ||||||
Sbjct: 199 aacaaacacgcgacaaggttaccgtcactgtagtttccaatgatcaggtcagggttggcc 140
Query: 1754 tgaagctctccagcaatctcatgcgccacgtcatcagtgtaagtctccaggtacggccag 1813
|| |||||||| || |||||||| ||||| ||||| ||||||| |||||||| ||||||
Sbjct: 139 tgcagctctccggcgatctcatgtgccacatcatcggtgtaagcttccaggtaaggccag 80
Query: 1814 acttcaaatcgcgagatccacttgcgaacgattccgttttctgttctgaatggcacgcga 1873
|||||||| || |||||||| || ||||| || || | ||||||| |||||||||| ||
Sbjct: 79 acttcaaaacgggagatccatttccgaacaataccatcttctgttttgaatggcacacgc 20
Query: 1874 aggatatggc 1883
||||| ||||
Sbjct: 19 aggatgtggc 10
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 385,375
Number of Sequences: 312970
Number of extensions: 385375
Number of successful extensions: 110960
Number of sequences better than 0.5: 422
Number of HSP's better than 0.5 without gapping: 422
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 109161
Number of HSP's gapped (non-prelim): 1441
length of query: 3202
length of database: 175,134,539
effective HSP length: 20
effective length of query: 3182
effective length of database: 168,875,139
effective search space: 537360692298
effective search space used: 537360692298
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)