BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 11001390.3.1
(588 letters)
Database: Avena_nucl_with_EST.fasta
8143 sequences; 4,702,463 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN818301.1|CN818301 HRO4460_A01_A02ZS5 Lib AA070E1X Aven... 34 0.13
gb|CN819383.1|CN819383 HRO4405_D02_G03ZS5 Lib AA069E1X Aven... 34 0.13
gb|CN820813.1|CN820813 HRO4420_B08_D16ZS5 Lib AA069E1X Aven... 34 0.13
gb|CN819557.1|CN819557 HRO4401_E09_I17ZS5 Lib AA069E1X Aven... 32 0.53
gb|CN814966.1|CN814966 HRO4504_D08_H16ZS5 Lib AA071E1X Aven... 30 2.1
gb|CN815032.1|CN815032 HRO4505_B04_C07ZS5 Lib AA071E1X Aven... 30 2.1
gb|CN816732.1|CN816732 HRO4524_B06_D12ZS5 Lib AA071E1X Aven... 30 2.1
gb|CN816814.1|CN816814 HRO4525_B02_C03ZS5 Lib AA071E1X Aven... 30 2.1
gb|CN817313.1|CN817313 HRO4465_A02_B03ZS5 Lib AA070E1X Aven... 30 2.1
gb|CN819857.1|CN819857 HRO4404_H05_P10ZS5 Lib AA069E1X Aven... 30 2.1
gb|CN820951.1|CN820951 HRO4421_G12_M23ZS5 Lib AA069E1X Aven... 30 2.1
gb|BE439344.1|BE439344 CDO949_WHE05E05R ITEC CDO Oat cDNA L... 28 8.2
gb|BE439346.1|BE439346 CDO959_WHE05E07R ITEC CDO Oat cDNA L... 28 8.2
gb|CN180780.1|CN180780 As03_isu1146_R ISU cDNA from oat Ave... 28 8.2
gb|CN815086.1|CN815086 HRO4505_G01_M01ZS5 Lib AA071E1X Aven... 28 8.2
gb|CN815274.1|CN815274 HRO4507_H03_P05ZS5 Lib AA071E1X Aven... 28 8.2
gb|CN815540.1|CN815540 HRO4512_G08_N16ZS5 Lib AA071E1X Aven... 28 8.2
gb|CN815923.1|CN815923 HRO4515_A01_B01ZS5 Lib AA071E1X Aven... 28 8.2
gb|CN816129.1|CN816129 HRO4517_C10_E19ZS5 Lib AA071E1X Aven... 28 8.2
gb|CN816171.1|CN816171 HRO4517_G05_M09ZS5 Lib AA071E1X Aven... 28 8.2
gb|CN816604.1|CN816604 HRO4522_G01_M02ZS5 Lib AA071E1X Aven... 28 8.2
gb|CN816714.1|CN816714 HRO4523_H10_P19ZS5 Lib AA071E1X Aven... 28 8.2
gb|CN816926.1|CN816926 HRO4526_C11_E22ZS5 Lib AA071E1X Aven... 28 8.2
gb|CN817958.1|CN817958 HRO4460_G09_M18ZS5 Lib AA070E1X Aven... 28 8.2
gb|CN818426.1|CN818426 HRO4460_F03_K06ZS5 Lib AA070E1X Aven... 28 8.2
gb|CN818734.1|CN818734 HRO4468_B03_C06ZS5 Lib AA070E1X Aven... 28 8.2
gb|CN819645.1|CN819645 HRO4402_E09_I18ZS5 Lib AA069E1X Aven... 28 8.2
gb|CN819691.1|CN819691 HRO4403_A07_B13ZS5 Lib AA069E1X Aven... 28 8.2
gb|CN819799.1|CN819799 HRO4404_B11_D22ZS5 Lib AA069E1X Aven... 28 8.2
gb|CN819858.1|CN819858 HRO4404_H06_P12ZS5 Lib AA069E1X Aven... 28 8.2
gb|CN820016.1|CN820016 HRO4410_B02_C04ZS5 Lib AA069E1X Aven... 28 8.2
gb|CN820827.1|CN820827 HRO4420_C12_F24ZS5 Lib AA069E1X Aven... 28 8.2
gb|CN820953.1|CN820953 HRO4421_H02_O03ZS5 Lib AA069E1X Aven... 28 8.2
gb|CN821198.1|CN821198 HRO4428_F01_L02ZS5 Lib AA069E1X Aven... 28 8.2
gb|CN821353.1|CN821353 HRO4424_D02_H04ZS5 Lib AA069E1X Aven... 28 8.2
gb|CN821374.1|CN821374 HRO4424_F02_L04ZS5 Lib AA069E1X Aven... 28 8.2
gb|CN821412.1|CN821412 HRO4425_A05_A09ZS5 Lib AA069E1X Aven... 28 8.2
gb|CN821500.1|CN821500 HRO4426_A07_A14ZS5 Lib AA069E1X Aven... 28 8.2
gb|CN821509.1|CN821509 HRO4426_B05_C10ZS5 Lib AA069E1X Aven... 28 8.2
emb|AX180459.1| Sequence 37 from Patent WO0146391 28 8.2
emb|AJ629311.1| Avena strigosa partial s5.11 gene for recep... 28 8.2
>gb|CN818301.1|CN818301 HRO4460_A01_A02ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4460_A01_A02, mRNA sequence
Length = 602
Score = 34.2 bits (17), Expect = 0.13
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 547 ccccagctattcaagta 563
|||||||||||||||||
Sbjct: 186 ccccagctattcaagta 202
>gb|CN819383.1|CN819383 HRO4405_D02_G03ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4405_D02_G03, mRNA
sequence
Length = 137
Score = 34.2 bits (17), Expect = 0.13
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 547 ccccagctattcaagta 563
|||||||||||||||||
Sbjct: 70 ccccagctattcaagta 86
>gb|CN820813.1|CN820813 HRO4420_B08_D16ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4420_B08_D16, mRNA
sequence
Length = 676
Score = 34.2 bits (17), Expect = 0.13
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 547 ccccagctattcaagta 563
|||||||||||||||||
Sbjct: 232 ccccagctattcaagta 248
>gb|CN819557.1|CN819557 HRO4401_E09_I17ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4401_E09_I17, mRNA
sequence
Length = 869
Score = 32.2 bits (16), Expect = 0.53
Identities = 16/16 (100%)
Strand = Plus / Plus
Query: 387 ccaacattgatgaaca 402
||||||||||||||||
Sbjct: 238 ccaacattgatgaaca 253
>gb|CN814966.1|CN814966 HRO4504_D08_H16ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4504_D08_H16, mRNA sequence
Length = 778
Score = 30.2 bits (15), Expect = 2.1
Identities = 15/15 (100%)
Strand = Plus / Plus
Query: 446 ccaccatggtctgtg 460
|||||||||||||||
Sbjct: 497 ccaccatggtctgtg 511
>gb|CN815032.1|CN815032 HRO4505_B04_C07ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4505_B04_C07, mRNA sequence
Length = 446
Score = 30.2 bits (15), Expect = 2.1
Identities = 15/15 (100%)
Strand = Plus / Plus
Query: 234 ttaaactttgtgaat 248
|||||||||||||||
Sbjct: 127 ttaaactttgtgaat 141
>gb|CN816732.1|CN816732 HRO4524_B06_D12ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4524_B06_D12, mRNA sequence
Length = 855
Score = 30.2 bits (15), Expect = 2.1
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 89 tacatgtattttggt 103
|||||||||||||||
Sbjct: 850 tacatgtattttggt 836
>gb|CN816814.1|CN816814 HRO4525_B02_C03ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4525_B02_C03, mRNA sequence
Length = 633
Score = 30.2 bits (15), Expect = 2.1
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 77 ttacaaaattattac 91
|||||||||||||||
Sbjct: 236 ttacaaaattattac 222
>gb|CN817313.1|CN817313 HRO4465_A02_B03ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4465_A02_B03, mRNA sequence
Length = 638
Score = 30.2 bits (15), Expect = 2.1
Identities = 15/15 (100%)
Strand = Plus / Plus
Query: 441 gtctaccaccatggt 455
|||||||||||||||
Sbjct: 84 gtctaccaccatggt 98
>gb|CN819857.1|CN819857 HRO4404_H05_P10ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4404_H05_P10, mRNA
sequence
Length = 853
Score = 30.2 bits (15), Expect = 2.1
Identities = 18/19 (94%)
Strand = Plus / Plus
Query: 350 atttcaggaaattcacagt 368
|||||| ||||||||||||
Sbjct: 602 atttcaagaaattcacagt 620
>gb|CN820951.1|CN820951 HRO4421_G12_M23ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4421_G12_M23, mRNA
sequence
Length = 589
Score = 30.2 bits (15), Expect = 2.1
Identities = 15/15 (100%)
Strand = Plus / Plus
Query: 72 gaagcttacaaaatt 86
|||||||||||||||
Sbjct: 195 gaagcttacaaaatt 209
>gb|BE439344.1|BE439344 CDO949_WHE05E05R ITEC CDO Oat cDNA Library Avena sativa cDNA clone
CDO949_WHE05E05, mRNA sequence
Length = 318
Score = 28.2 bits (14), Expect = 8.2
Identities = 14/14 (100%)
Strand = Plus / Minus
Query: 374 tcagcttttcttgc 387
||||||||||||||
Sbjct: 127 tcagcttttcttgc 114
>gb|BE439346.1|BE439346 CDO959_WHE05E07R ITEC CDO Oat cDNA Library Avena sativa cDNA clone
CDO959_WHE05E07, mRNA sequence
Length = 491
Score = 28.2 bits (14), Expect = 8.2
Identities = 14/14 (100%)
Strand = Plus / Minus
Query: 374 tcagcttttcttgc 387
||||||||||||||
Sbjct: 127 tcagcttttcttgc 114
>gb|CN180780.1|CN180780 As03_isu1146_R ISU cDNA from oat Avena sativa cDNA clone
As03_isu1146, mRNA sequence
Length = 746
Score = 28.2 bits (14), Expect = 8.2
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 334 ccacacaaatggaa 347
||||||||||||||
Sbjct: 85 ccacacaaatggaa 98
>gb|CN815086.1|CN815086 HRO4505_G01_M01ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4505_G01_M01, mRNA sequence
Length = 478
Score = 28.2 bits (14), Expect = 8.2
Identities = 14/14 (100%)
Strand = Plus / Minus
Query: 414 cagtctggattttt 427
||||||||||||||
Sbjct: 200 cagtctggattttt 187
>gb|CN815274.1|CN815274 HRO4507_H03_P05ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4507_H03_P05, mRNA sequence
Length = 645
Score = 28.2 bits (14), Expect = 8.2
Identities = 14/14 (100%)
Strand = Plus / Minus
Query: 402 ataaatatgcttca 415
||||||||||||||
Sbjct: 626 ataaatatgcttca 613
>gb|CN815540.1|CN815540 HRO4512_G08_N16ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4512_G08_N16, mRNA sequence
Length = 647
Score = 28.2 bits (14), Expect = 8.2
Identities = 14/14 (100%)
Strand = Plus / Minus
Query: 287 aaattagggcccat 300
||||||||||||||
Sbjct: 540 aaattagggcccat 527
>gb|CN815923.1|CN815923 HRO4515_A01_B01ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4515_A01_B01, mRNA sequence
Length = 566
Score = 28.2 bits (14), Expect = 8.2
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 449 ccatggtctgtgag 462
||||||||||||||
Sbjct: 318 ccatggtctgtgag 331
>gb|CN816129.1|CN816129 HRO4517_C10_E19ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4517_C10_E19, mRNA sequence
Length = 826
Score = 28.2 bits (14), Expect = 8.2
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 389 aacattgatgaaca 402
||||||||||||||
Sbjct: 53 aacattgatgaaca 66
>gb|CN816171.1|CN816171 HRO4517_G05_M09ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4517_G05_M09, mRNA sequence
Length = 828
Score = 28.2 bits (14), Expect = 8.2
Identities = 14/14 (100%)
Strand = Plus / Minus
Query: 406 atatgcttcagtct 419
||||||||||||||
Sbjct: 284 atatgcttcagtct 271
>gb|CN816604.1|CN816604 HRO4522_G01_M02ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4522_G01_M02, mRNA sequence
Length = 636
Score = 28.2 bits (14), Expect = 8.2
Identities = 17/18 (94%)
Strand = Plus / Plus
Query: 385 tgccaacattgatgaaca 402
||||||||||| ||||||
Sbjct: 69 tgccaacattgttgaaca 86
>gb|CN816714.1|CN816714 HRO4523_H10_P19ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4523_H10_P19, mRNA sequence
Length = 500
Score = 28.2 bits (14), Expect = 8.2
Identities = 14/14 (100%)
Strand = Plus / Minus
Query: 407 tatgcttcagtctg 420
||||||||||||||
Sbjct: 339 tatgcttcagtctg 326
>gb|CN816926.1|CN816926 HRO4526_C11_E22ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4526_C11_E22, mRNA sequence
Length = 601
Score = 28.2 bits (14), Expect = 8.2
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 342 atggaagcatttca 355
||||||||||||||
Sbjct: 440 atggaagcatttca 453
>gb|CN817958.1|CN817958 HRO4460_G09_M18ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4460_G09_M18, mRNA sequence
Length = 758
Score = 28.2 bits (14), Expect = 8.2
Identities = 14/14 (100%)
Strand = Plus / Minus
Query: 402 ataaatatgcttca 415
||||||||||||||
Sbjct: 758 ataaatatgcttca 745
>gb|CN818426.1|CN818426 HRO4460_F03_K06ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4460_F03_K06, mRNA sequence
Length = 376
Score = 28.2 bits (14), Expect = 8.2
Identities = 14/14 (100%)
Strand = Plus / Minus
Query: 402 ataaatatgcttca 415
||||||||||||||
Sbjct: 374 ataaatatgcttca 361
>gb|CN818734.1|CN818734 HRO4468_B03_C06ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4468_B03_C06, mRNA sequence
Length = 686
Score = 28.2 bits (14), Expect = 8.2
Identities = 14/14 (100%)
Strand = Plus / Minus
Query: 572 cctagaattctatc 585
||||||||||||||
Sbjct: 662 cctagaattctatc 649
>gb|CN819645.1|CN819645 HRO4402_E09_I18ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4402_E09_I18, mRNA
sequence
Length = 822
Score = 28.2 bits (14), Expect = 8.2
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 478 tgaaactgtggctt 491
||||||||||||||
Sbjct: 447 tgaaactgtggctt 460
>gb|CN819691.1|CN819691 HRO4403_A07_B13ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4403_A07_B13, mRNA
sequence
Length = 619
Score = 28.2 bits (14), Expect = 8.2
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 117 agcggacagctggt 130
||||||||||||||
Sbjct: 360 agcggacagctggt 373
>gb|CN819799.1|CN819799 HRO4404_B11_D22ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4404_B11_D22, mRNA
sequence
Length = 634
Score = 28.2 bits (14), Expect = 8.2
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 555 attcaagtaggcat 568
||||||||||||||
Sbjct: 251 attcaagtaggcat 264
>gb|CN819858.1|CN819858 HRO4404_H06_P12ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4404_H06_P12, mRNA
sequence
Length = 476
Score = 28.2 bits (14), Expect = 8.2
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 365 cagttttgctcagc 378
||||||||||||||
Sbjct: 48 cagttttgctcagc 61
>gb|CN820016.1|CN820016 HRO4410_B02_C04ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4410_B02_C04, mRNA
sequence
Length = 525
Score = 28.2 bits (14), Expect = 8.2
Identities = 14/14 (100%)
Strand = Plus / Minus
Query: 14 gccacataggcctg 27
||||||||||||||
Sbjct: 300 gccacataggcctg 287
>gb|CN820827.1|CN820827 HRO4420_C12_F24ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4420_C12_F24, mRNA
sequence
Length = 522
Score = 28.2 bits (14), Expect = 8.2
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 43 ttgctgttgctcgt 56
||||||||||||||
Sbjct: 168 ttgctgttgctcgt 181
>gb|CN820953.1|CN820953 HRO4421_H02_O03ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4421_H02_O03, mRNA
sequence
Length = 706
Score = 28.2 bits (14), Expect = 8.2
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 426 ttggaaaatcttat 439
||||||||||||||
Sbjct: 206 ttggaaaatcttat 219
>gb|CN821198.1|CN821198 HRO4428_F01_L02ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4428_F01_L02, mRNA
sequence
Length = 728
Score = 28.2 bits (14), Expect = 8.2
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 41 ttttgctgttgctc 54
||||||||||||||
Sbjct: 533 ttttgctgttgctc 546
>gb|CN821353.1|CN821353 HRO4424_D02_H04ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4424_D02_H04, mRNA
sequence
Length = 645
Score = 28.2 bits (14), Expect = 8.2
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 331 tgtccacacaaatg 344
||||||||||||||
Sbjct: 202 tgtccacacaaatg 215
>gb|CN821374.1|CN821374 HRO4424_F02_L04ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4424_F02_L04, mRNA
sequence
Length = 838
Score = 28.2 bits (14), Expect = 8.2
Identities = 14/14 (100%)
Strand = Plus / Minus
Query: 414 cagtctggattttt 427
||||||||||||||
Sbjct: 259 cagtctggattttt 246
>gb|CN821412.1|CN821412 HRO4425_A05_A09ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4425_A05_A09, mRNA
sequence
Length = 518
Score = 28.2 bits (14), Expect = 8.2
Identities = 14/14 (100%)
Strand = Plus / Minus
Query: 88 ttacatgtattttg 101
||||||||||||||
Sbjct: 434 ttacatgtattttg 421
>gb|CN821500.1|CN821500 HRO4426_A07_A14ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4426_A07_A14, mRNA
sequence
Length = 575
Score = 28.2 bits (14), Expect = 8.2
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 309 cacatgtgtattcc 322
||||||||||||||
Sbjct: 512 cacatgtgtattcc 525
>gb|CN821509.1|CN821509 HRO4426_B05_C10ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4426_B05_C10, mRNA
sequence
Length = 580
Score = 28.2 bits (14), Expect = 8.2
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 309 cacatgtgtattcc 322
||||||||||||||
Sbjct: 564 cacatgtgtattcc 577
>emb|AX180459.1| Sequence 37 from Patent WO0146391
Length = 1944
Score = 28.2 bits (14), Expect = 8.2
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 142 gataactagctatg 155
||||||||||||||
Sbjct: 1336 gataactagctatg 1349
>emb|AJ629311.1| Avena strigosa partial s5.11 gene for receptor-like-kinase
Length = 968
Score = 28.2 bits (14), Expect = 8.2
Identities = 14/14 (100%)
Strand = Plus / Minus
Query: 361 ttcacagttttgct 374
||||||||||||||
Sbjct: 677 ttcacagttttgct 664
Database: Avena_nucl_with_EST.fasta
Posted date: May 2, 2006 2:37 PM
Number of letters in database: 4,702,463
Number of sequences in database: 8143
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1499
Number of Sequences: 8143
Number of extensions: 1499
Number of successful extensions: 378
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 328
Number of HSP's gapped (non-prelim): 50
length of query: 588
length of database: 4,702,463
effective HSP length: 16
effective length of query: 572
effective length of database: 4,572,175
effective search space: 2615284100
effective search space used: 2615284100
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 14 (28.2 bits)