BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QCK13d03.yg.3.1
(2611 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AU237815.1|AU237815 AU237815 RAFL16 Arabidopsis thaliana... 137 1e-029
gb|CK119999.1|CK119999 219b07.p AtM1 Arabidopsis thaliana c... 137 1e-029
dbj|AK118082.1| Arabidopsis thaliana At5g04885 mRNA for unk... 137 1e-029
ref|NM_147836.2| Arabidopsis thaliana hydrolase, hydrolyzin... 137 1e-029
gb|AV823723.1|AV823723 AV823723 RAFL6 Arabidopsis thaliana ... 123 2e-025
gb|AY092999.1| Arabidopsis thaliana beta-glucosidase-like p... 123 2e-025
emb|BX830026.1|CNS0A1C4 Arabidopsis thaliana Full-length cD... 123 2e-025
ref|NM_122103.3| Arabidopsis thaliana hydrolase, hydrolyzin... 123 2e-025
gb|CK119277.1|CK119277 218f19.p1 AtM1 Arabidopsis thaliana ... 121 6e-025
gb|AF462808.1|AF462808 Arabidopsis thaliana beta-D-glucan e... 121 6e-025
gb|AY091027.1| Arabidopsis thaliana putative beta-D-glucan ... 121 6e-025
gb|AY142679.1| Arabidopsis thaliana putative beta-D-glucan ... 121 6e-025
ref|NM_180717.1| Arabidopsis thaliana hydrolase, hydrolyzin... 121 6e-025
ref|NM_122104.3| Arabidopsis thaliana hydrolase, hydrolyzin... 121 6e-025
gb|BU635545.1|BU635545 025B02 Infected Arabidopsis Leaf Ara... 74 1e-010
gb|AV552137.1|AV552137 AV552137 Arabidopsis thaliana roots ... 74 1e-010
gb|BP561029.2|BP561029 BP561029 RAFL5 Arabidopsis thaliana ... 74 1e-010
gb|AF296834.1|F22D1 Arabidopsis thaliana BAC F22D1 62 5e-007
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 62 5e-007
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 62 5e-007
emb|AL083552.1|CNS00OQQ Arabidopsis thaliana genome survey ... 56 3e-005
gb|CL470312.1|CL470312 SAIL_13_H10.v1 SAIL Collection Arabi... 56 3e-005
gb|CL475513.1|CL475513 SAIL_23_E08.v1 SAIL Collection Arabi... 56 3e-005
dbj|AB008271.1| Arabidopsis thaliana genomic DNA, chromosom... 56 3e-005
gb|CL516794.1|CL516794 SAIL_95_B10.v1 SAIL Collection Arabi... 54 1e-004
gb|CF651771.1|CF651771 01-L020578-066-004-A02-SP6P MPIZ-ADI... 52 5e-004
gb|CF652906.1|CF652906 83-L020833-066-004-A02q-SP6P MPIZ-AD... 52 5e-004
gb|BP646984.1|BP646984 BP646984 RAFL19 Arabidopsis thaliana... 52 5e-004
emb|BX002044.1| Arabidopsis thaliana T-DNA flanking sequenc... 50 0.002
gb|T21523.1|T21523 3531 Lambda-PRL2 Arabidopsis thaliana cD... 50 0.002
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 50 0.002
emb|AL133292.3|ATF13I12 Arabidopsis thaliana DNA chromosome... 50 0.002
ref|NM_114571.1| Arabidopsis thaliana hydrolase, hydrolyzin... 50 0.002
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 50 0.002
gb|CW842057.1|CW842057 ET11912.Ds3.04.23.2003.jw99.800 Arab... 48 0.008
gb|AU236096.1|AU236096 AU236096 RAFL14 Arabidopsis thaliana... 48 0.008
gb|BP798349.1|BP798349 BP798349 RAFL14 Arabidopsis thaliana... 48 0.008
ref|NM_114572.2| Arabidopsis thaliana hydrolase, hydrolyzin... 48 0.008
gb|Z26115.1|Z26115 ATTS1387 Grenoble-B Arabidopsis thaliana... 46 0.031
gb|AA395613.1|AA395613 28001 Lambda-PRL2 Arabidopsis thalia... 46 0.031
gb|BE525356.1|BE525356 M7G1STM Arabidopsis developing seed ... 46 0.031
gb|AV784755.1|AV784755 AV784755 RAFL6 Arabidopsis thaliana ... 46 0.031
gb|AV822340.1|AV822340 AV822340 RAFL5 Arabidopsis thaliana ... 46 0.031
gb|AV829152.1|AV829152 AV829152 RAFL9 Arabidopsis thaliana ... 46 0.031
gb|AV830791.1|AV830791 AV830791 RAFL9 Arabidopsis thaliana ... 46 0.031
gb|BP801280.1|BP801280 BP801280 RAFL14 Arabidopsis thaliana... 46 0.031
gb|BP805418.1|BP805418 BP805418 RAFL16 Arabidopsis thaliana... 46 0.031
gb|BP809333.1|BP809333 BP809333 RAFL16 Arabidopsis thaliana... 46 0.031
gb|BP813583.1|BP813583 BP813583 RAFL19 Arabidopsis thaliana... 46 0.031
gb|BP825255.1|BP825255 BP825255 RAFL19 Arabidopsis thaliana... 46 0.031
gb|BP837435.1|BP837435 BP837435 RAFL19 Arabidopsis thaliana... 46 0.031
gb|AV783076.1|AV783076 AV783076 RAFL5 Arabidopsis thaliana ... 44 0.12
gb|AV784514.1|AV784514 AV784514 RAFL5 Arabidopsis thaliana ... 44 0.12
gb|AV794844.1|AV794844 AV794844 RAFL8 Arabidopsis thaliana ... 44 0.12
gb|AV798147.1|AV798147 AV798147 RAFL9 Arabidopsis thaliana ... 44 0.12
gb|AV799272.1|AV799272 AV799272 RAFL9 Arabidopsis thaliana ... 44 0.12
gb|AV805245.1|AV805245 AV805245 RAFL9 Arabidopsis thaliana ... 44 0.12
gb|AV816720.1|AV816720 AV816720 RAFL9 Arabidopsis thaliana ... 44 0.12
gb|BU636687.1|BU636687 010C07 Infected Arabidopsis Leaf Ara... 44 0.12
gb|AV543737.1|AV543737 AV543737 Arabidopsis thaliana roots ... 44 0.12
gb|AV566057.1|AV566057 AV566057 Arabidopsis thaliana green ... 44 0.12
gb|CK121760.1|CK121760 201b14.p1 AtM1 Arabidopsis thaliana ... 44 0.12
gb|BP579031.1|BP579031 BP579031 RAFL14 Arabidopsis thaliana... 44 0.12
gb|BP586699.1|BP586699 BP586699 RAFL15 Arabidopsis thaliana... 44 0.12
gb|BP588500.1|BP588500 BP588500 RAFL15 Arabidopsis thaliana... 44 0.12
gb|BP595889.1|BP595889 BP595889 RAFL15 Arabidopsis thaliana... 44 0.12
gb|BP596364.1|BP596364 BP596364 RAFL15 Arabidopsis thaliana... 44 0.12
gb|BP601838.1|BP601838 BP601838 RAFL16 Arabidopsis thaliana... 44 0.12
gb|BP643756.1|BP643756 BP643756 RAFL19 Arabidopsis thaliana... 44 0.12
gb|BP644922.1|BP644922 BP644922 RAFL19 Arabidopsis thaliana... 44 0.12
gb|BP659455.1|BP659455 BP659455 RAFL19 Arabidopsis thaliana... 44 0.12
gb|BP784023.1|BP784023 BP784023 RAFL7 Arabidopsis thaliana ... 44 0.12
gb|BP786546.1|BP786546 BP786546 RAFL7 Arabidopsis thaliana ... 44 0.12
gb|BP814948.1|BP814948 BP814948 RAFL19 Arabidopsis thaliana... 44 0.12
dbj|AK221104.1| Arabidopsis thaliana mRNA for beta-D-glucan... 44 0.12
>gb|AU237815.1|AU237815 AU237815 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-58-F12 5',
mRNA sequence
Length = 670
Score = 137 bits (69), Expect = 1e-029
Identities = 171/205 (83%)
Strand = Plus / Plus
Query: 746 gggcacaacaacgtctacaaagctactattttccctcacaacgtcgggcttggagctacc 805
||||| ||||| ||||| || |||||||||||||||||||| || || |||||||| ||
Sbjct: 422 gggcataacaatgtctataacgctactattttccctcacaatgttggtcttggagccact 481
Query: 806 agggaccctgacctcgttaagagaattggagaagcaactgctcttgaagttagagctact 865
||||| ||||| || |||||||| ||||||| ||||||||| | ||||| ||||| |||
Sbjct: 482 agggatcctgatcttgttaagaggattggagcagcaactgcagtcgaagtcagagccact 541
Query: 866 ggaattccttacgcctttgctccctgtatagcggtctgtagagatccaagatggggacgc 925
||||| || ||| | |||||||| || || || || ||||||||||| |||||||| |
Sbjct: 542 ggaatcccatacacatttgctccttgcattgcagtttgtagagatcccagatggggtaga 601
Query: 926 tgctatgagagctacagtgaggatc 950
|| |||||||||||||| |||||||
Sbjct: 602 tgttatgagagctacagcgaggatc 626
>gb|CK119999.1|CK119999 219b07.p AtM1 Arabidopsis thaliana cDNA clone MPMGp2011B07219
5-PRIME, mRNA sequence
Length = 708
Score = 137 bits (69), Expect = 1e-029
Identities = 171/205 (83%)
Strand = Plus / Plus
Query: 746 gggcacaacaacgtctacaaagctactattttccctcacaacgtcgggcttggagctacc 805
||||| ||||| ||||| || |||||||||||||||||||| || || |||||||| ||
Sbjct: 388 gggcataacaatgtctataacgctactattttccctcacaatgttggtcttggagccact 447
Query: 806 agggaccctgacctcgttaagagaattggagaagcaactgctcttgaagttagagctact 865
||||| ||||| || |||||||| ||||||| ||||||||| | ||||| ||||| |||
Sbjct: 448 agggatcctgatcttgttaagaggattggagcagcaactgcagtcgaagtcagagccact 507
Query: 866 ggaattccttacgcctttgctccctgtatagcggtctgtagagatccaagatggggacgc 925
||||| || ||| | |||||||| || || || || ||||||||||| |||||||| |
Sbjct: 508 ggaatcccatacacatttgctccttgcattgcagtttgtagagatcccagatggggtaga 567
Query: 926 tgctatgagagctacagtgaggatc 950
|| |||||||||||||| |||||||
Sbjct: 568 tgttatgagagctacagcgaggatc 592
>dbj|AK118082.1| Arabidopsis thaliana At5g04885 mRNA for unknown protein, complete
cds, clone: RAFL19-33-I17
Length = 2344
Score = 137 bits (69), Expect = 1e-029
Identities = 171/205 (83%)
Strand = Plus / Plus
Query: 746 gggcacaacaacgtctacaaagctactattttccctcacaacgtcgggcttggagctacc 805
||||| ||||| ||||| || |||||||||||||||||||| || || |||||||| ||
Sbjct: 504 gggcataacaatgtctataacgctactattttccctcacaatgttggtcttggagccact 563
Query: 806 agggaccctgacctcgttaagagaattggagaagcaactgctcttgaagttagagctact 865
||||| ||||| || |||||||| ||||||| ||||||||| | ||||| ||||| |||
Sbjct: 564 agggatcctgatcttgttaagaggattggagcagcaactgcagtcgaagtcagagccact 623
Query: 866 ggaattccttacgcctttgctccctgtatagcggtctgtagagatccaagatggggacgc 925
||||| || ||| | |||||||| || || || || ||||||||||| |||||||| |
Sbjct: 624 ggaatcccatacacatttgctccttgcattgcagtttgtagagatcccagatggggtaga 683
Query: 926 tgctatgagagctacagtgaggatc 950
|| |||||||||||||| |||||||
Sbjct: 684 tgttatgagagctacagcgaggatc 708
Score = 46.1 bits (23), Expect = 0.031
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 1501 tgtcaagttcaccatgggcctgttcgagaaccctt 1535
|||||||||||||||||| || || ||||||||||
Sbjct: 1262 tgtcaagttcaccatgggtctttttgagaaccctt 1296
>ref|NM_147836.2| Arabidopsis thaliana hydrolase, hydrolyzing O-glycosyl compounds
AT5G04885 mRNA, complete cds
Length = 2349
Score = 137 bits (69), Expect = 1e-029
Identities = 171/205 (83%)
Strand = Plus / Plus
Query: 746 gggcacaacaacgtctacaaagctactattttccctcacaacgtcgggcttggagctacc 805
||||| ||||| ||||| || |||||||||||||||||||| || || |||||||| ||
Sbjct: 505 gggcataacaatgtctataacgctactattttccctcacaatgttggtcttggagccact 564
Query: 806 agggaccctgacctcgttaagagaattggagaagcaactgctcttgaagttagagctact 865
||||| ||||| || |||||||| ||||||| ||||||||| | ||||| ||||| |||
Sbjct: 565 agggatcctgatcttgttaagaggattggagcagcaactgcagtcgaagtcagagccact 624
Query: 866 ggaattccttacgcctttgctccctgtatagcggtctgtagagatccaagatggggacgc 925
||||| || ||| | |||||||| || || || || ||||||||||| |||||||| |
Sbjct: 625 ggaatcccatacacatttgctccttgcattgcagtttgtagagatcccagatggggtaga 684
Query: 926 tgctatgagagctacagtgaggatc 950
|| |||||||||||||| |||||||
Sbjct: 685 tgttatgagagctacagcgaggatc 709
Score = 46.1 bits (23), Expect = 0.031
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 1501 tgtcaagttcaccatgggcctgttcgagaaccctt 1535
|||||||||||||||||| || || ||||||||||
Sbjct: 1263 tgtcaagttcaccatgggtctttttgagaaccctt 1297
>gb|AV823723.1|AV823723 AV823723 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-07-P20 5',
mRNA sequence
Length = 666
Score = 123 bits (62), Expect = 2e-025
Identities = 185/226 (81%)
Strand = Plus / Plus
Query: 725 tacggtatcgatgcagtgcatgggcacaacaacgtctacaaagctactattttccctcac 784
||||| |||||||| || ||||| ||||||| ||| ||||| || || |||||||| ||
Sbjct: 404 tacgggatcgatgctgttcatggtcacaacaccgtgtacaacgccaccattttcccgcat 463
Query: 785 aacgtcgggcttggagctaccagggaccctgacctcgttaagagaattggagaagcaact 844
||||| || || |||| |||||||| |||| || || ||||||||||| |||||||||
Sbjct: 464 aacgtaggcctcggagtcaccagggatcctggtcttgtgaagagaattggtgaagcaact 523
Query: 845 gctcttgaagttagagctactggaattccttacgcctttgctccctgtatagcggtctgt 904
|| |||||||||||||| || ||||| | || | ||||||||| || || || || |||
Sbjct: 524 gcgcttgaagttagagcaacaggaatccaatatgtctttgctccatgcattgcagtgtgt 583
Query: 905 agagatccaagatggggacgctgctatgagagctacagtgaggatc 950
|| || || ||||||||| | |||||||||||||| ||||||||||
Sbjct: 584 agggaccctagatggggaagatgctatgagagctatagtgaggatc 629
>gb|AY092999.1| Arabidopsis thaliana beta-glucosidase-like protein (At5g20940)
mRNA, complete cds
Length = 2078
Score = 123 bits (62), Expect = 2e-025
Identities = 185/226 (81%)
Strand = Plus / Plus
Query: 725 tacggtatcgatgcagtgcatgggcacaacaacgtctacaaagctactattttccctcac 784
||||| |||||||| || ||||| ||||||| ||| ||||| || || |||||||| ||
Sbjct: 403 tacgggatcgatgctgttcatggtcacaacaccgtgtacaacgccaccattttcccgcat 462
Query: 785 aacgtcgggcttggagctaccagggaccctgacctcgttaagagaattggagaagcaact 844
||||| || || |||| |||||||| |||| || || ||||||||||| |||||||||
Sbjct: 463 aacgtaggcctcggagtcaccagggatcctggtcttgtgaagagaattggtgaagcaact 522
Query: 845 gctcttgaagttagagctactggaattccttacgcctttgctccctgtatagcggtctgt 904
|| |||||||||||||| || ||||| | || | ||||||||| || || || || |||
Sbjct: 523 gcgcttgaagttagagcaacaggaatccaatatgtctttgctccatgcattgcagtgtgt 582
Query: 905 agagatccaagatggggacgctgctatgagagctacagtgaggatc 950
|| || || ||||||||| | |||||||||||||| ||||||||||
Sbjct: 583 agggaccctagatggggaagatgctatgagagctatagtgaggatc 628
Score = 46.1 bits (23), Expect = 0.031
Identities = 116/147 (78%)
Strand = Plus / Plus
Query: 2063 gtggcggcgtggctgccagggtcggaggggcagggcgtggcggacgtgctgttcggcgac 2122
|||||||||||||| || || |||| || || || ||||| || || ||||||| ||
Sbjct: 1741 gtggcggcgtggcttccgggaacggaaggtcaaggagtggctgatgttttgttcggagat 1800
Query: 2123 tacgggttcacggggaagctgccgcggacgtggttcaagtcggtggaccagctgcccatg 2182
|| || ||||| ||||| || | ||||||||||| ||| | ||||| ||| |||| |||
Sbjct: 1801 tatggattcaccgggaaattggctcggacgtggtttaagacagtggatcagttgccgatg 1860
Query: 2183 aacgtgggcgacgcgcactacgacccg 2209
||||| || ||| |||| |||||||||
Sbjct: 1861 aacgttggtgacccgcattacgacccg 1887
Score = 44.1 bits (22), Expect = 0.12
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 1251 tcacggattttctcaagaacaagctcaagtttaggggttttgtgatttccgact 1304
|||||| ||| ||||||||||| |||||||| ||||| |||| || |||||||
Sbjct: 929 tcacgggtttcctcaagaacaaactcaagttcaggggcattgtcatctccgact 982
Score = 42.1 bits (21), Expect = 0.48
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1455 tcatccccatgagcagaatcgacga 1479
||||||| |||||||||||||||||
Sbjct: 1133 tcatcccgatgagcagaatcgacga 1157
>emb|BX830026.1|CNS0A1C4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB54ZB07 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1734
Score = 123 bits (62), Expect = 2e-025
Identities = 185/226 (81%)
Strand = Plus / Plus
Query: 725 tacggtatcgatgcagtgcatgggcacaacaacgtctacaaagctactattttccctcac 784
||||| |||||||| || ||||| ||||||| ||| ||||| || || |||||||| ||
Sbjct: 321 tacgggatcgatgctgttcatggtcacaacaccgtgtacaacgccaccattttcccgcat 380
Query: 785 aacgtcgggcttggagctaccagggaccctgacctcgttaagagaattggagaagcaact 844
||||| || || |||| |||||||| |||| || || ||||||||||| |||||||||
Sbjct: 381 aacgtaggcctcggagtcaccagggatcctggtcttgtgaagagaattggtgaagcaact 440
Query: 845 gctcttgaagttagagctactggaattccttacgcctttgctccctgtatagcggtctgt 904
|| |||||||||||||| || ||||| | || | ||||||||| || || || || |||
Sbjct: 441 gcgcttgaagttagagcaacaggaatccaatatgtctttgctccatgcattgcagtttgt 500
Query: 905 agagatccaagatggggacgctgctatgagagctacagtgaggatc 950
|| || || ||||||||| | |||||||||||||| ||||||||||
Sbjct: 501 agggaccctagatggggaagatgctatgagagctatagtgaggatc 546
Score = 42.1 bits (21), Expect = 0.48
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1455 tcatccccatgagcagaatcgacga 1479
||||||| |||||||||||||||||
Sbjct: 1047 tcatcccgatgagcagaatcgacga 1071
>ref|NM_122103.3| Arabidopsis thaliana hydrolase, hydrolyzing O-glycosyl compounds
AT5G20940 mRNA, complete cds
Length = 2078
Score = 123 bits (62), Expect = 2e-025
Identities = 185/226 (81%)
Strand = Plus / Plus
Query: 725 tacggtatcgatgcagtgcatgggcacaacaacgtctacaaagctactattttccctcac 784
||||| |||||||| || ||||| ||||||| ||| ||||| || || |||||||| ||
Sbjct: 403 tacgggatcgatgctgttcatggtcacaacaccgtgtacaacgccaccattttcccgcat 462
Query: 785 aacgtcgggcttggagctaccagggaccctgacctcgttaagagaattggagaagcaact 844
||||| || || |||| |||||||| |||| || || ||||||||||| |||||||||
Sbjct: 463 aacgtaggcctcggagtcaccagggatcctggtcttgtgaagagaattggtgaagcaact 522
Query: 845 gctcttgaagttagagctactggaattccttacgcctttgctccctgtatagcggtctgt 904
|| |||||||||||||| || ||||| | || | ||||||||| || || || || |||
Sbjct: 523 gcgcttgaagttagagcaacaggaatccaatatgtctttgctccatgcattgcagtgtgt 582
Query: 905 agagatccaagatggggacgctgctatgagagctacagtgaggatc 950
|| || || ||||||||| | |||||||||||||| ||||||||||
Sbjct: 583 agggaccctagatggggaagatgctatgagagctatagtgaggatc 628
Score = 46.1 bits (23), Expect = 0.031
Identities = 116/147 (78%)
Strand = Plus / Plus
Query: 2063 gtggcggcgtggctgccagggtcggaggggcagggcgtggcggacgtgctgttcggcgac 2122
|||||||||||||| || || |||| || || || ||||| || || ||||||| ||
Sbjct: 1741 gtggcggcgtggcttccgggaacggaaggtcaaggagtggctgatgttttgttcggagat 1800
Query: 2123 tacgggttcacggggaagctgccgcggacgtggttcaagtcggtggaccagctgcccatg 2182
|| || ||||| ||||| || | ||||||||||| ||| | ||||| ||| |||| |||
Sbjct: 1801 tatggattcaccgggaaattggctcggacgtggtttaagacagtggatcagttgccgatg 1860
Query: 2183 aacgtgggcgacgcgcactacgacccg 2209
||||| || ||| |||| |||||||||
Sbjct: 1861 aacgttggtgacccgcattacgacccg 1887
Score = 44.1 bits (22), Expect = 0.12
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 1251 tcacggattttctcaagaacaagctcaagtttaggggttttgtgatttccgact 1304
|||||| ||| ||||||||||| |||||||| ||||| |||| || |||||||
Sbjct: 929 tcacgggtttcctcaagaacaaactcaagttcaggggcattgtcatctccgact 982
Score = 42.1 bits (21), Expect = 0.48
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1455 tcatccccatgagcagaatcgacga 1479
||||||| |||||||||||||||||
Sbjct: 1133 tcatcccgatgagcagaatcgacga 1157
>gb|CK119277.1|CK119277 218f19.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011F19218
5-PRIME, mRNA sequence
Length = 730
Score = 121 bits (61), Expect = 6e-025
Identities = 148/177 (83%)
Strand = Plus / Plus
Query: 773 attttccctcacaacgtcgggcttggagctaccagggaccctgacctcgttaagagaatt 832
|||||||| ||||| || || ||||||| |||||||| ||| |||| |||||||| |||
Sbjct: 511 attttcccgcacaatgtaggccttggagtcaccagggatcctaaccttgttaagaggatt 570
Query: 833 ggagaagcaactgctcttgaagttagagctactggaattccttacgcctttgctccctgt 892
|| | |||||| || |||||||| ||||| |||||||| || || |||||||| || |||
Sbjct: 571 ggggcagcaaccgcgcttgaagtcagagcgactggaatcccatatgcctttgccccgtgt 630
Query: 893 atagcggtctgtagagatccaagatggggacgctgctatgagagctacagtgaggat 949
|| || || ||||| ||||||||||||||| | ||||| ||||||||||| ||||||
Sbjct: 631 attgcagtttgtagggatccaagatggggaagatgctacgagagctacagcgaggat 687
Score = 46.1 bits (23), Expect = 0.031
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 461 aagtacaaggacccaaagcagcc 483
|||||||||||||||||||||||
Sbjct: 199 aagtacaaggacccaaagcagcc 221
>gb|AF462808.1|AF462808 Arabidopsis thaliana beta-D-glucan exohydrolase-like protein mRNA,
complete cds
Length = 2194
Score = 121 bits (61), Expect = 6e-025
Identities = 148/177 (83%)
Strand = Plus / Plus
Query: 773 attttccctcacaacgtcgggcttggagctaccagggaccctgacctcgttaagagaatt 832
|||||||| ||||| || || ||||||| |||||||| ||| |||| |||||||| |||
Sbjct: 523 attttcccgcacaatgtaggccttggagtcaccagggatcctaaccttgttaagaggatt 582
Query: 833 ggagaagcaactgctcttgaagttagagctactggaattccttacgcctttgctccctgt 892
|| | |||||| || |||||||| ||||| |||||||| || || |||||||| || |||
Sbjct: 583 ggggcagcaaccgcgcttgaagtcagagcgactggaatcccatatgcctttgccccgtgt 642
Query: 893 atagcggtctgtagagatccaagatggggacgctgctatgagagctacagtgaggat 949
|| || || ||||| ||||||||||||||| | ||||| ||||||||||| ||||||
Sbjct: 643 attgcagtttgtagggatccaagatggggaagatgctacgagagctacagcgaggat 699
Score = 73.8 bits (37), Expect = 1e-010
Identities = 76/89 (85%)
Strand = Plus / Plus
Query: 1250 gtcacggattttctcaagaacaagctcaagtttaggggttttgtgatttccgactgggag 1309
||||||| ||| |||||||||||| | ||||| ||||||||||| || || || ||| ||
Sbjct: 1000 gtcacgggtttcctcaagaacaagttgaagttcaggggttttgtcatctctgattggcag 1059
Query: 1310 ggcattgatcggatcactactcctcctca 1338
|| |||||| ||||||| |||||||||||
Sbjct: 1060 gggattgataggatcacgactcctcctca 1088
Score = 46.1 bits (23), Expect = 0.031
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 461 aagtacaaggacccaaagcagcc 483
|||||||||||||||||||||||
Sbjct: 211 aagtacaaggacccaaagcagcc 233
Score = 44.1 bits (22), Expect = 0.12
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 2123 tacgggttcacggggaagctgccgcggacgtggttcaagtcggtggaccagctgcccatg 2182
||||||||||| || ||| || | ||||||||||| ||||||||| | ||||| || |||
Sbjct: 1879 tacgggttcacaggaaagttggcccggacgtggtttaagtcggtgaagcagctaccgatg 1938
Query: 2183 aa 2184
||
Sbjct: 1939 aa 1940
>gb|AY091027.1| Arabidopsis thaliana putative beta-D-glucan exohydrolase
(At5g20950) mRNA, complete cds
Length = 2220
Score = 121 bits (61), Expect = 6e-025
Identities = 148/177 (83%)
Strand = Plus / Plus
Query: 773 attttccctcacaacgtcgggcttggagctaccagggaccctgacctcgttaagagaatt 832
|||||||| ||||| || || ||||||| |||||||| ||| |||| |||||||| |||
Sbjct: 543 attttcccgcacaatgtaggccttggagtcaccagggatcctaaccttgttaagaggatt 602
Query: 833 ggagaagcaactgctcttgaagttagagctactggaattccttacgcctttgctccctgt 892
|| | |||||| || |||||||| ||||| |||||||| || || |||||||| || |||
Sbjct: 603 ggggcagcaaccgcgcttgaagtcagagcgactggaatcccatatgcctttgccccgtgt 662
Query: 893 atagcggtctgtagagatccaagatggggacgctgctatgagagctacagtgaggat 949
|| || || ||||| ||||||||||||||| | ||||| ||||||||||| ||||||
Sbjct: 663 attgcagtttgtagggatccaagatggggaagatgctacgagagctacagcgaggat 719
Score = 73.8 bits (37), Expect = 1e-010
Identities = 76/89 (85%)
Strand = Plus / Plus
Query: 1250 gtcacggattttctcaagaacaagctcaagtttaggggttttgtgatttccgactgggag 1309
||||||| ||| |||||||||||| | ||||| ||||||||||| || || || ||| ||
Sbjct: 1020 gtcacgggtttcctcaagaacaagttgaagttcaggggttttgtcatctctgattggcag 1079
Query: 1310 ggcattgatcggatcactactcctcctca 1338
|| |||||| ||||||| |||||||||||
Sbjct: 1080 gggattgataggatcacgactcctcctca 1108
Score = 46.1 bits (23), Expect = 0.031
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 461 aagtacaaggacccaaagcagcc 483
|||||||||||||||||||||||
Sbjct: 231 aagtacaaggacccaaagcagcc 253
Score = 44.1 bits (22), Expect = 0.12
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 2123 tacgggttcacggggaagctgccgcggacgtggttcaagtcggtggaccagctgcccatg 2182
||||||||||| || ||| || | ||||||||||| ||||||||| | ||||| || |||
Sbjct: 1899 tacgggttcacaggaaagttggcccggacgtggtttaagtcggtgaagcagctaccgatg 1958
Query: 2183 aa 2184
||
Sbjct: 1959 aa 1960
>gb|AY142679.1| Arabidopsis thaliana putative beta-D-glucan exohydrolase
(At5g20950) mRNA, complete cds
Length = 1906
Score = 121 bits (61), Expect = 6e-025
Identities = 148/177 (83%)
Strand = Plus / Plus
Query: 773 attttccctcacaacgtcgggcttggagctaccagggaccctgacctcgttaagagaatt 832
|||||||| ||||| || || ||||||| |||||||| ||| |||| |||||||| |||
Sbjct: 385 attttcccgcacaatgtaggccttggagtcaccagggatcctaaccttgttaagaggatt 444
Query: 833 ggagaagcaactgctcttgaagttagagctactggaattccttacgcctttgctccctgt 892
|| | |||||| || |||||||| ||||| |||||||| || || |||||||| || |||
Sbjct: 445 ggggcagcaaccgcgcttgaagtcagagcgactggaatcccatatgcctttgccccgtgt 504
Query: 893 atagcggtctgtagagatccaagatggggacgctgctatgagagctacagtgaggat 949
|| || || ||||| ||||||||||||||| | ||||| ||||||||||| ||||||
Sbjct: 505 attgcagtttgtagggatccaagatggggaagatgctacgagagctacagcgaggat 561
Score = 73.8 bits (37), Expect = 1e-010
Identities = 76/89 (85%)
Strand = Plus / Plus
Query: 1250 gtcacggattttctcaagaacaagctcaagtttaggggttttgtgatttccgactgggag 1309
||||||| ||| |||||||||||| | ||||| ||||||||||| || || || ||| ||
Sbjct: 862 gtcacgggtttcctcaagaacaagttgaagttcaggggttttgtcatctctgattggcag 921
Query: 1310 ggcattgatcggatcactactcctcctca 1338
|| |||||| ||||||| |||||||||||
Sbjct: 922 gggattgataggatcacgactcctcctca 950
Score = 46.1 bits (23), Expect = 0.031
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 461 aagtacaaggacccaaagcagcc 483
|||||||||||||||||||||||
Sbjct: 73 aagtacaaggacccaaagcagcc 95
Score = 44.1 bits (22), Expect = 0.12
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 2123 tacgggttcacggggaagctgccgcggacgtggttcaagtcggtggaccagctgcccatg 2182
||||||||||| || ||| || | ||||||||||| ||||||||| | ||||| || |||
Sbjct: 1741 tacgggttcacaggaaagttggcccggacgtggtttaagtcggtgaagcagctaccgatg 1800
Query: 2183 aa 2184
||
Sbjct: 1801 aa 1802
>ref|NM_180717.1| Arabidopsis thaliana hydrolase, hydrolyzing O-glycosyl compounds
AT5G20950 transcript variant AT5G20950.1 mRNA, complete
cds
Length = 2247
Score = 121 bits (61), Expect = 6e-025
Identities = 148/177 (83%)
Strand = Plus / Plus
Query: 773 attttccctcacaacgtcgggcttggagctaccagggaccctgacctcgttaagagaatt 832
|||||||| ||||| || || ||||||| |||||||| ||| |||| |||||||| |||
Sbjct: 524 attttcccgcacaatgtaggccttggagtcaccagggatcctaaccttgttaagaggatt 583
Query: 833 ggagaagcaactgctcttgaagttagagctactggaattccttacgcctttgctccctgt 892
|| | |||||| || |||||||| ||||| |||||||| || || |||||||| || |||
Sbjct: 584 ggggcagcaaccgcgcttgaagtcagagcgactggaatcccatatgcctttgccccgtgt 643
Query: 893 atagcggtctgtagagatccaagatggggacgctgctatgagagctacagtgaggat 949
|| || || ||||| ||||||||||||||| | ||||| ||||||||||| ||||||
Sbjct: 644 attgcagtttgtagggatccaagatggggaagatgctacgagagctacagcgaggat 700
Score = 73.8 bits (37), Expect = 1e-010
Identities = 76/89 (85%)
Strand = Plus / Plus
Query: 1250 gtcacggattttctcaagaacaagctcaagtttaggggttttgtgatttccgactgggag 1309
||||||| ||| |||||||||||| | ||||| ||||||||||| || || || ||| ||
Sbjct: 1001 gtcacgggtttcctcaagaacaagttgaagttcaggggttttgtcatctctgattggcag 1060
Query: 1310 ggcattgatcggatcactactcctcctca 1338
|| |||||| ||||||| |||||||||||
Sbjct: 1061 gggattgataggatcacgactcctcctca 1089
Score = 46.1 bits (23), Expect = 0.031
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 461 aagtacaaggacccaaagcagcc 483
|||||||||||||||||||||||
Sbjct: 212 aagtacaaggacccaaagcagcc 234
Score = 44.1 bits (22), Expect = 0.12
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 2123 tacgggttcacggggaagctgccgcggacgtggttcaagtcggtggaccagctgcccatg 2182
||||||||||| || ||| || | ||||||||||| ||||||||| | ||||| || |||
Sbjct: 1880 tacgggttcacaggaaagttggcccggacgtggtttaagtcggtgaagcagctaccgatg 1939
Query: 2183 aa 2184
||
Sbjct: 1940 aa 1941
>ref|NM_122104.3| Arabidopsis thaliana hydrolase, hydrolyzing O-glycosyl compounds
AT5G20950 transcript variant AT5G20950.2 mRNA, complete
cds
Length = 2266
Score = 121 bits (61), Expect = 6e-025
Identities = 148/177 (83%)
Strand = Plus / Plus
Query: 773 attttccctcacaacgtcgggcttggagctaccagggaccctgacctcgttaagagaatt 832
|||||||| ||||| || || ||||||| |||||||| ||| |||| |||||||| |||
Sbjct: 543 attttcccgcacaatgtaggccttggagtcaccagggatcctaaccttgttaagaggatt 602
Query: 833 ggagaagcaactgctcttgaagttagagctactggaattccttacgcctttgctccctgt 892
|| | |||||| || |||||||| ||||| |||||||| || || |||||||| || |||
Sbjct: 603 ggggcagcaaccgcgcttgaagtcagagcgactggaatcccatatgcctttgccccgtgt 662
Query: 893 atagcggtctgtagagatccaagatggggacgctgctatgagagctacagtgaggat 949
|| || || ||||| ||||||||||||||| | ||||| ||||||||||| ||||||
Sbjct: 663 attgcagtttgtagggatccaagatggggaagatgctacgagagctacagcgaggat 719
Score = 73.8 bits (37), Expect = 1e-010
Identities = 76/89 (85%)
Strand = Plus / Plus
Query: 1250 gtcacggattttctcaagaacaagctcaagtttaggggttttgtgatttccgactgggag 1309
||||||| ||| |||||||||||| | ||||| ||||||||||| || || || ||| ||
Sbjct: 1020 gtcacgggtttcctcaagaacaagttgaagttcaggggttttgtcatctctgattggcag 1079
Query: 1310 ggcattgatcggatcactactcctcctca 1338
|| |||||| ||||||| |||||||||||
Sbjct: 1080 gggattgataggatcacgactcctcctca 1108
Score = 46.1 bits (23), Expect = 0.031
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 461 aagtacaaggacccaaagcagcc 483
|||||||||||||||||||||||
Sbjct: 231 aagtacaaggacccaaagcagcc 253
Score = 44.1 bits (22), Expect = 0.12
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 2123 tacgggttcacggggaagctgccgcggacgtggttcaagtcggtggaccagctgcccatg 2182
||||||||||| || ||| || | ||||||||||| ||||||||| | ||||| || |||
Sbjct: 1899 tacgggttcacaggaaagttggcccggacgtggtttaagtcggtgaagcagctaccgatg 1958
Query: 2183 aa 2184
||
Sbjct: 1959 aa 1960
>gb|BU635545.1|BU635545 025B02 Infected Arabidopsis Leaf Arabidopsis thaliana cDNA, mRNA
sequence
Length = 642
Score = 73.8 bits (37), Expect = 1e-010
Identities = 76/89 (85%)
Strand = Plus / Plus
Query: 1250 gtcacggattttctcaagaacaagctcaagtttaggggttttgtgatttccgactgggag 1309
||||||| ||| |||||||||||| | ||||| ||||||||||| || || || ||| ||
Sbjct: 345 gtcacgggtttcctcaagaacaagttgaagttcaggggttttgtcatctctgattggcag 404
Query: 1310 ggcattgatcggatcactactcctcctca 1338
|| |||||| ||||||| |||||||||||
Sbjct: 405 gggattgataggatcacgactcctcctca 433
>gb|AV552137.1|AV552137 AV552137 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ21h03R 5', mRNA sequence
Length = 352
Score = 73.8 bits (37), Expect = 1e-010
Identities = 76/89 (85%)
Strand = Plus / Plus
Query: 1250 gtcacggattttctcaagaacaagctcaagtttaggggttttgtgatttccgactgggag 1309
||||||| ||| |||||||||||| | ||||| ||||||||||| || || || ||| ||
Sbjct: 133 gtcacgggtttcctcaagaacaagttgaagttcaggggttttgtcatctctgattggcag 192
Query: 1310 ggcattgatcggatcactactcctcctca 1338
|| |||||| ||||||| |||||||||||
Sbjct: 193 gggattgataggatcacgactcctcctca 221
>gb|BP561029.2|BP561029 BP561029 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-20-L23 5', mRNA
sequence
Length = 615
Score = 73.8 bits (37), Expect = 1e-010
Identities = 76/89 (85%)
Strand = Plus / Plus
Query: 1250 gtcacggattttctcaagaacaagctcaagtttaggggttttgtgatttccgactgggag 1309
||||||| ||| |||||||||||| | ||||| ||||||||||| || || || ||| ||
Sbjct: 293 gtcacgggtttcctcaagaacaagttgaagttcaggggttttgtcatctctgattggcag 352
Query: 1310 ggcattgatcggatcactactcctcctca 1338
|| |||||| ||||||| |||||||||||
Sbjct: 353 gggattgataggatcacgactcctcctca 381
>gb|AF296834.1|F22D1 Arabidopsis thaliana BAC F22D1
Length = 96102
Score = 61.9 bits (31), Expect = 5e-007
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 824 aagagaattggagaagcaactgctcttgaagttagagctactggaat 870
||||||||||| ||||||||||| |||||||||||||| || |||||
Sbjct: 49737 aagagaattggtgaagcaactgcgcttgaagttagagcaacaggaat 49691
Score = 56.0 bits (28), Expect = 3e-005
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 902 tgtagagatccaagatggggacgctgctatgagagctacagtgaggat 949
||||| ||||||||||||||| | ||||| ||||||||||| ||||||
Sbjct: 53628 tgtagggatccaagatggggaagatgctacgagagctacagcgaggat 53581
Score = 50.1 bits (25), Expect = 0.002
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 914 agatggggacgctgctatgagagctacagtgaggatc 950
||||||||| | |||||||||||||| ||||||||||
Sbjct: 49582 agatggggaagatgctatgagagctatagtgaggatc 49546
Score = 46.1 bits (23), Expect = 0.031
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 461 aagtacaaggacccaaagcagcc 483
|||||||||||||||||||||||
Sbjct: 54395 aagtacaaggacccaaagcagcc 54373
Score = 46.1 bits (23), Expect = 0.031
Identities = 116/147 (78%)
Strand = Plus / Minus
Query: 2063 gtggcggcgtggctgccagggtcggaggggcagggcgtggcggacgtgctgttcggcgac 2122
|||||||||||||| || || |||| || || || ||||| || || ||||||| ||
Sbjct: 47956 gtggcggcgtggcttccgggaacggaaggtcaaggagtggctgatgttttgttcggagat 47897
Query: 2123 tacgggttcacggggaagctgccgcggacgtggttcaagtcggtggaccagctgcccatg 2182
|| || ||||| ||||| || | ||||||||||| ||| | ||||| ||| |||| |||
Sbjct: 47896 tatggattcaccgggaaattggctcggacgtggtttaagacagtggatcagttgccgatg 47837
Query: 2183 aacgtgggcgacgcgcactacgacccg 2209
||||| || ||| |||| |||||||||
Sbjct: 47836 aacgttggtgacccgcattacgacccg 47810
Score = 44.1 bits (22), Expect = 0.12
Identities = 46/54 (85%)
Strand = Plus / Minus
Query: 1285 gggttttgtgatttccgactgggagggcattgatcggatcactactcctcctca 1338
||||||||| || || || ||| |||| |||||| ||||||| |||||||||||
Sbjct: 52609 gggttttgtcatctctgattggcaggggattgataggatcacgactcctcctca 52556
Score = 44.1 bits (22), Expect = 0.12
Identities = 52/62 (83%)
Strand = Plus / Minus
Query: 2123 tacgggttcacggggaagctgccgcggacgtggttcaagtcggtggaccagctgcccatg 2182
||||||||||| || ||| || | ||||||||||| ||||||||| | ||||| || |||
Sbjct: 51435 tacgggttcacaggaaagttggcccggacgtggtttaagtcggtgaagcagctaccgatg 51376
Query: 2183 aa 2184
||
Sbjct: 51375 aa 51374
Score = 42.1 bits (21), Expect = 0.48
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 1455 tcatccccatgagcagaatcgacga 1479
||||||| |||||||||||||||||
Sbjct: 48809 tcatcccgatgagcagaatcgacga 48785
>dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, complete sequence
Length = 23810767
Score = 61.9 bits (31), Expect = 5e-007
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 824 aagagaattggagaagcaactgctcttgaagttagagctactggaat 870
||||||||||| ||||||||||| |||||||||||||| || |||||
Sbjct: 6818577 aagagaattggtgaagcaactgcgcttgaagttagagcaacaggaat 6818531
Score = 56.0 bits (28), Expect = 3e-005
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 902 tgtagagatccaagatggggacgctgctatgagagctacagtgaggat 949
||||| ||||||||||||||| | ||||| ||||||||||| ||||||
Sbjct: 6822468 tgtagggatccaagatggggaagatgctacgagagctacagcgaggat 6822421
Score = 56.0 bits (28), Expect = 3e-005
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 746 gggcacaacaacgtctacaaagctactattttccctcacaacgtcgggcttggagc 801
||||| ||||| ||||| || |||||||||||||||||||| || || ||||||||
Sbjct: 1374304 gggcataacaatgtctataacgctactattttccctcacaatgttggtcttggagc 1374359
Score = 50.1 bits (25), Expect = 0.002
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 914 agatggggacgctgctatgagagctacagtgaggatc 950
||||||||| | |||||||||||||| ||||||||||
Sbjct: 6818422 agatggggaagatgctatgagagctatagtgaggatc 6818386
Score = 50.1 bits (25), Expect = 0.002
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 902 tgtagagatccaagatggggacgctgctatgagagctacagtgaggatc 950
||||||||||| |||||||| | || |||||||||||||| |||||||
Sbjct: 1374665 tgtagagatcccagatggggtagatgttatgagagctacagcgaggatc 1374713
Score = 46.1 bits (23), Expect = 0.031
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 461 aagtacaaggacccaaagcagcc 483
|||||||||||||||||||||||
Sbjct: 6823235 aagtacaaggacccaaagcagcc 6823213
Score = 46.1 bits (23), Expect = 0.031
Identities = 116/147 (78%)
Strand = Plus / Minus
Query: 2063 gtggcggcgtggctgccagggtcggaggggcagggcgtggcggacgtgctgttcggcgac 2122
|||||||||||||| || || |||| || || || ||||| || || ||||||| ||
Sbjct: 6816796 gtggcggcgtggcttccgggaacggaaggtcaaggagtggctgatgttttgttcggagat 6816737
Query: 2123 tacgggttcacggggaagctgccgcggacgtggttcaagtcggtggaccagctgcccatg 2182
|| || ||||| ||||| || | ||||||||||| ||| | ||||| ||| |||| |||
Sbjct: 6816736 tatggattcaccgggaaattggctcggacgtggtttaagacagtggatcagttgccgatg 6816677
Query: 2183 aacgtgggcgacgcgcactacgacccg 2209
||||| || ||| |||| |||||||||
Sbjct: 6816676 aacgttggtgacccgcattacgacccg 6816650
Score = 46.1 bits (23), Expect = 0.031
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 1501 tgtcaagttcaccatgggcctgttcgagaaccctt 1535
|||||||||||||||||| || || ||||||||||
Sbjct: 1375627 tgtcaagttcaccatgggtctttttgagaaccctt 1375661
Score = 44.1 bits (22), Expect = 0.12
Identities = 46/54 (85%)
Strand = Plus / Minus
Query: 1285 gggttttgtgatttccgactgggagggcattgatcggatcactactcctcctca 1338
||||||||| || || || ||| |||| |||||| ||||||| |||||||||||
Sbjct: 6821449 gggttttgtcatctctgattggcaggggattgataggatcacgactcctcctca 6821396
Score = 44.1 bits (22), Expect = 0.12
Identities = 52/62 (83%)
Strand = Plus / Minus
Query: 2123 tacgggttcacggggaagctgccgcggacgtggttcaagtcggtggaccagctgcccatg 2182
||||||||||| || ||| || | ||||||||||| ||||||||| | ||||| || |||
Sbjct: 6820275 tacgggttcacaggaaagttggcccggacgtggtttaagtcggtgaagcagctaccgatg 6820216
Query: 2183 aa 2184
||
Sbjct: 6820215 aa 6820214
Score = 42.1 bits (21), Expect = 0.48
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 1455 tcatccccatgagcagaatcgacga 1479
||||||| |||||||||||||||||
Sbjct: 6817649 tcatcccgatgagcagaatcgacga 6817625
>ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complete sequence
Length = 26992728
Score = 61.9 bits (31), Expect = 5e-007
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 824 aagagaattggagaagcaactgctcttgaagttagagctactggaat 870
||||||||||| ||||||||||| |||||||||||||| || |||||
Sbjct: 7106047 aagagaattggtgaagcaactgcgcttgaagttagagcaacaggaat 7106001
Score = 56.0 bits (28), Expect = 3e-005
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 902 tgtagagatccaagatggggacgctgctatgagagctacagtgaggat 949
||||| ||||||||||||||| | ||||| ||||||||||| ||||||
Sbjct: 7109938 tgtagggatccaagatggggaagatgctacgagagctacagcgaggat 7109891
Score = 56.0 bits (28), Expect = 3e-005
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 746 gggcacaacaacgtctacaaagctactattttccctcacaacgtcgggcttggagc 801
||||| ||||| ||||| || |||||||||||||||||||| || || ||||||||
Sbjct: 1424042 gggcataacaatgtctataacgctactattttccctcacaatgttggtcttggagc 1424097
Score = 50.1 bits (25), Expect = 0.002
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 914 agatggggacgctgctatgagagctacagtgaggatc 950
||||||||| | |||||||||||||| ||||||||||
Sbjct: 7105892 agatggggaagatgctatgagagctatagtgaggatc 7105856
Score = 50.1 bits (25), Expect = 0.002
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 902 tgtagagatccaagatggggacgctgctatgagagctacagtgaggatc 950
||||||||||| |||||||| | || |||||||||||||| |||||||
Sbjct: 1424403 tgtagagatcccagatggggtagatgttatgagagctacagcgaggatc 1424451
Score = 46.1 bits (23), Expect = 0.031
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 461 aagtacaaggacccaaagcagcc 483
|||||||||||||||||||||||
Sbjct: 7110705 aagtacaaggacccaaagcagcc 7110683
Score = 46.1 bits (23), Expect = 0.031
Identities = 116/147 (78%)
Strand = Plus / Minus
Query: 2063 gtggcggcgtggctgccagggtcggaggggcagggcgtggcggacgtgctgttcggcgac 2122
|||||||||||||| || || |||| || || || ||||| || || ||||||| ||
Sbjct: 7104266 gtggcggcgtggcttccgggaacggaaggtcaaggagtggctgatgttttgttcggagat 7104207
Query: 2123 tacgggttcacggggaagctgccgcggacgtggttcaagtcggtggaccagctgcccatg 2182
|| || ||||| ||||| || | ||||||||||| ||| | ||||| ||| |||| |||
Sbjct: 7104206 tatggattcaccgggaaattggctcggacgtggtttaagacagtggatcagttgccgatg 7104147
Query: 2183 aacgtgggcgacgcgcactacgacccg 2209
||||| || ||| |||| |||||||||
Sbjct: 7104146 aacgttggtgacccgcattacgacccg 7104120
Score = 46.1 bits (23), Expect = 0.031
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 1501 tgtcaagttcaccatgggcctgttcgagaaccctt 1535
|||||||||||||||||| || || ||||||||||
Sbjct: 1425365 tgtcaagttcaccatgggtctttttgagaaccctt 1425399
Score = 44.1 bits (22), Expect = 0.12
Identities = 46/54 (85%)
Strand = Plus / Minus
Query: 1285 gggttttgtgatttccgactgggagggcattgatcggatcactactcctcctca 1338
||||||||| || || || ||| |||| |||||| ||||||| |||||||||||
Sbjct: 7108919 gggttttgtcatctctgattggcaggggattgataggatcacgactcctcctca 7108866
Score = 44.1 bits (22), Expect = 0.12
Identities = 52/62 (83%)
Strand = Plus / Minus
Query: 2123 tacgggttcacggggaagctgccgcggacgtggttcaagtcggtggaccagctgcccatg 2182
||||||||||| || ||| || | ||||||||||| ||||||||| | ||||| || |||
Sbjct: 7107745 tacgggttcacaggaaagttggcccggacgtggtttaagtcggtgaagcagctaccgatg 7107686
Query: 2183 aa 2184
||
Sbjct: 7107685 aa 7107684
Score = 42.1 bits (21), Expect = 0.48
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 1455 tcatccccatgagcagaatcgacga 1479
||||||| |||||||||||||||||
Sbjct: 7105119 tcatcccgatgagcagaatcgacga 7105095
>emb|AL083552.1|CNS00OQQ Arabidopsis thaliana genome survey sequence T7 end of BAC F7C5 of
IGF library from strain Columbia of Arabidopsis
thaliana, genomic survey sequence
Length = 464
Score = 56.0 bits (28), Expect = 3e-005
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 746 gggcacaacaacgtctacaaagctactattttccctcacaacgtcgggcttggagc 801
||||| ||||| ||||| || |||||||||||||||||||| || || ||||||||
Sbjct: 15 gggcataacaatgtctataacgctactattttccctcacaatgttggtcttggagc 70
Score = 50.1 bits (25), Expect = 0.002
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 902 tgtagagatccaagatggggacgctgctatgagagctacagtgaggatc 950
||||||||||| |||||||| | || |||||||||||||| |||||||
Sbjct: 376 tgtagagatcccagatggggtagatgttatgagagctacagcgaggatc 424
>gb|CL470312.1|CL470312 SAIL_13_H10.v1 SAIL Collection Arabidopsis thaliana genomic clone
SAIL_13_H10.v1, DNA sequence
Length = 935
Score = 56.0 bits (28), Expect = 3e-005
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 746 gggcacaacaacgtctacaaagctactattttccctcacaacgtcgggcttggagc 801
||||| ||||| ||||| || |||||||||||||||||||| || || ||||||||
Sbjct: 210 gggcataacaatgtctataacgctactattttccctcacaatgttggtcttggagc 265
>gb|CL475513.1|CL475513 SAIL_23_E08.v1 SAIL Collection Arabidopsis thaliana genomic clone
SAIL_23_E08.v1, DNA sequence
Length = 929
Score = 56.0 bits (28), Expect = 3e-005
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 746 gggcacaacaacgtctacaaagctactattttccctcacaacgtcgggcttggagc 801
||||| ||||| ||||| || |||||||||||||||||||| || || ||||||||
Sbjct: 204 gggcataacaatgtctataacgctactattttccctcacaatgttggtcttggagc 259
>dbj|AB008271.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUK11
Length = 79073
Score = 56.0 bits (28), Expect = 3e-005
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 746 gggcacaacaacgtctacaaagctactattttccctcacaacgtcgggcttggagc 801
||||| ||||| ||||| || |||||||||||||||||||| || || ||||||||
Sbjct: 71567 gggcataacaatgtctataacgctactattttccctcacaatgttggtcttggagc 71622
Score = 50.1 bits (25), Expect = 0.002
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 902 tgtagagatccaagatggggacgctgctatgagagctacagtgaggatc 950
||||||||||| |||||||| | || |||||||||||||| |||||||
Sbjct: 71928 tgtagagatcccagatggggtagatgttatgagagctacagcgaggatc 71976
Score = 46.1 bits (23), Expect = 0.031
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 1501 tgtcaagttcaccatgggcctgttcgagaaccctt 1535
|||||||||||||||||| || || ||||||||||
Sbjct: 72890 tgtcaagttcaccatgggtctttttgagaaccctt 72924
>gb|CL516794.1|CL516794 SAIL_95_B10.v1 SAIL Collection Arabidopsis thaliana genomic clone
SAIL_95_B10.v1, DNA sequence
Length = 749
Score = 54.0 bits (27), Expect = 1e-004
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 828 gaattggagaagcaactgctcttgaagttagagctactggaat 870
||||||| ||||||||||| |||||||||||||| || |||||
Sbjct: 145 gaattggtgaagcaactgcgcttgaagttagagcaacaggaat 103
Score = 50.1 bits (25), Expect = 0.002
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 914 agatggggacgctgctatgagagctacagtgaggatc 950
||||||||| | |||||||||||||| ||||||||||
Sbjct: 180 agatggggaagatgctatgagagctatagtgaggatc 216
>gb|CF651771.1|CF651771 01-L020578-066-004-A02-SP6P MPIZ-ADIS-066 Arabidopsis thaliana cDNA
clone MPIZp2001A024Q 5-PRIME, mRNA sequence
Length = 844
Score = 52.0 bits (26), Expect = 5e-004
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 881 tttgctccctgtatagcggtctgtagagatccaagatggggacgctgctatgagagctac 940
|||||||| || || || || ||||||||||| |||||||| | || ||||||||||||
Sbjct: 5 tttgctccttgcattgcagtttgtagagatcccagatggggtagatgttatgagagctac 64
Query: 941 agtgaggatc 950
|| |||||||
Sbjct: 65 agcgaggatc 74
Score = 46.1 bits (23), Expect = 0.031
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 1501 tgtcaagttcaccatgggcctgttcgagaaccctt 1535
|||||||||||||||||| || || ||||||||||
Sbjct: 628 tgtcaagttcaccatgggtctttttgagaaccctt 662
>gb|CF652906.1|CF652906 83-L020833-066-004-A02q-SP6P MPIZ-ADIS-066 Arabidopsis thaliana
cDNA clone MPIZp2001A024Q 5-PRIME, mRNA sequence
Length = 927
Score = 52.0 bits (26), Expect = 5e-004
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 881 tttgctccctgtatagcggtctgtagagatccaagatggggacgctgctatgagagctac 940
|||||||| || || || || ||||||||||| |||||||| | || ||||||||||||
Sbjct: 5 tttgctccttgcattgcagtttgtagagatcccagatggggtagatgttatgagagctac 64
Query: 941 agtgaggatc 950
|| |||||||
Sbjct: 65 agcgaggatc 74
Score = 46.1 bits (23), Expect = 0.031
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 1501 tgtcaagttcaccatgggcctgttcgagaaccctt 1535
|||||||||||||||||| || || ||||||||||
Sbjct: 628 tgtcaagttcaccatgggtctttttgagaaccctt 662
>gb|BP646984.1|BP646984 BP646984 RAFL19 Arabidopsis thaliana cDNA clone RAFL19-73-P05 3',
mRNA sequence
Length = 401
Score = 52.0 bits (26), Expect = 5e-004
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 2123 tacgggttcacggggaagctgccgcggacgtggttcaagtcggtggaccagctgcccatg 2182
||||||||||| || ||| || | ||||||||||| ||||||||| ||||||| || |||
Sbjct: 340 tacgggttcacaggaaagttggcccggacgtggtttaagtcggtgaaccagctaccgatg 281
Query: 2183 aa 2184
||
Sbjct: 280 aa 279
>emb|BX002044.1| Arabidopsis thaliana T-DNA flanking sequence GK-361A04-016997,
genomic survey sequence
Length = 464
Score = 50.1 bits (25), Expect = 0.002
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 902 tgtagagatccaagatggggacgctgctatgagagctacagtgaggatc 950
||||||||||| |||||||| | || |||||||||||||| |||||||
Sbjct: 159 tgtagagatcccagatggggtagatgttatgagagctacagcgaggatc 111
>gb|T21523.1|T21523 3531 Lambda-PRL2 Arabidopsis thaliana cDNA clone 93O21T7, mRNA
sequence
Length = 428
Score = 50.1 bits (25), Expect = 0.002
Identities = 117/149 (78%)
Strand = Plus / Plus
Query: 1253 acggattttctcaagaacaagctcaagtttaggggttttgtgatttccgactgggagggc 1312
|||| ||| |||||||||||| | ||||| ||||||||| | || || | ||| ||||
Sbjct: 47 acgggtttcctcaagaacaagttgaagttcaggggttttntnatctctnattggcagggg 106
Query: 1313 attgatcggatcactactcctcctcacgccaactactcttactcaattgaggctggtgtt 1372
|||||| || |||| ||||||||||| ||||| || ||||| || | || || |
Sbjct: 107 attgataggntcacgactcctcctcatcttaactattcatactctgtttacgcgggaatc 166
Query: 1373 ggtgctggaattgacatgatcatggttcc 1401
||||||||||||||||||| ||||||||
Sbjct: 167 agtgctggaattgacatgattatggttcc 195
>dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complete sequence
Length = 23403063
Score = 50.1 bits (25), Expect = 0.002
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 530 gaaaagatcggccagatgacgcagatcga 558
|||||||||||||||||||| ||||||||
Sbjct: 17291059 gaaaagatcggccagatgactcagatcga 17291031
Score = 48.1 bits (24), Expect = 0.008
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 514 tcggatgactctcgccgaaaagatcggccagatgac 549
|||||||||||| || ||||| ||||||||||||||
Sbjct: 17294827 tcggatgactctggctgaaaaaatcggccagatgac 17294792
Score = 42.1 bits (21), Expect = 0.48
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 907 agatccaagatggggacgctgctatgagagcta 939
|||||| ||||||||| | ||||||||||||||
Sbjct: 17293948 agatccgagatggggaagatgctatgagagcta 17293916
>emb|AL133292.3|ATF13I12 Arabidopsis thaliana DNA chromosome 3, BAC clone F13I12
Length = 140680
Score = 50.1 bits (25), Expect = 0.002
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 530 gaaaagatcggccagatgacgcagatcga 558
|||||||||||||||||||| ||||||||
Sbjct: 44440 gaaaagatcggccagatgactcagatcga 44412
Score = 48.1 bits (24), Expect = 0.008
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 514 tcggatgactctcgccgaaaagatcggccagatgac 549
|||||||||||| || ||||| ||||||||||||||
Sbjct: 48208 tcggatgactctggctgaaaaaatcggccagatgac 48173
Score = 42.1 bits (21), Expect = 0.48
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 907 agatccaagatggggacgctgctatgagagcta 939
|||||| ||||||||| | ||||||||||||||
Sbjct: 47329 agatccgagatggggaagatgctatgagagcta 47297
>ref|NM_114571.1| Arabidopsis thaliana hydrolase, hydrolyzing O-glycosyl compounds
AT3G47040 mRNA, complete cds
Length = 1911
Score = 50.1 bits (25), Expect = 0.002
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 530 gaaaagatcggccagatgacgcagatcga 558
|||||||||||||||||||| ||||||||
Sbjct: 94 gaaaagatcggccagatgactcagatcga 122
>ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complete sequence
Length = 23470805
Score = 50.1 bits (25), Expect = 0.002
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 530 gaaaagatcggccagatgacgcagatcga 558
|||||||||||||||||||| ||||||||
Sbjct: 17337997 gaaaagatcggccagatgactcagatcga 17337969
Score = 48.1 bits (24), Expect = 0.008
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 514 tcggatgactctcgccgaaaagatcggccagatgac 549
|||||||||||| || ||||| ||||||||||||||
Sbjct: 17341765 tcggatgactctggctgaaaaaatcggccagatgac 17341730
Score = 42.1 bits (21), Expect = 0.48
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 907 agatccaagatggggacgctgctatgagagcta 939
|||||| ||||||||| | ||||||||||||||
Sbjct: 17340886 agatccgagatggggaagatgctatgagagcta 17340854
>gb|CW842057.1|CW842057 ET11912.Ds3.04.23.2003.jw99.800 Arabidopsis thaliana Landsberg Ds
insertion lines Arabidopsis thaliana genomic clone
ET11912, DNA sequence
Length = 800
Score = 48.1 bits (24), Expect = 0.008
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 514 tcggatgactctcgccgaaaagatcggccagatgac 549
|||||||||||| || ||||| ||||||||||||||
Sbjct: 279 tcggatgactctggctgaaaaaatcggccagatgac 314
>gb|AU236096.1|AU236096 AU236096 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-65-H16 5',
mRNA sequence
Length = 496
Score = 48.1 bits (24), Expect = 0.008
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 514 tcggatgactctcgccgaaaagatcggccagatgac 549
|||||||||||| || ||||| ||||||||||||||
Sbjct: 110 tcggatgactctggctgaaaaaatcggccagatgac 145
>gb|BP798349.1|BP798349 BP798349 RAFL14 Arabidopsis thaliana cDNA clone RAFL23-06-P12 5',
mRNA sequence
Length = 388
Score = 48.1 bits (24), Expect = 0.008
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 514 tcggatgactctcgccgaaaagatcggccagatgac 549
|||||||||||| || ||||| ||||||||||||||
Sbjct: 109 tcggatgactctggctgaaaaaatcggccagatgac 144
>ref|NM_114572.2| Arabidopsis thaliana hydrolase, hydrolyzing O-glycosyl compounds
AT3G47050 mRNA, complete cds
Length = 1928
Score = 48.1 bits (24), Expect = 0.008
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 514 tcggatgactctcgccgaaaagatcggccagatgac 549
|||||||||||| || ||||| ||||||||||||||
Sbjct: 110 tcggatgactctggctgaaaaaatcggccagatgac 145
Score = 42.1 bits (21), Expect = 0.48
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 907 agatccaagatggggacgctgctatgagagcta 939
|||||| ||||||||| | ||||||||||||||
Sbjct: 503 agatccgagatggggaagatgctatgagagcta 535
>gb|Z26115.1|Z26115 ATTS1387 Grenoble-B Arabidopsis thaliana cDNA clone GBGe53, mRNA
sequence
Length = 465
Score = 46.1 bits (23), Expect = 0.031
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 1501 tgtcaagttcaccatgggcctgttcgagaaccctt 1535
|||||||||||||||||| || || ||||||||||
Sbjct: 55 tgtcaagttcaccatgggtctttttgagaaccctt 89
>gb|AA395613.1|AA395613 28001 Lambda-PRL2 Arabidopsis thaliana cDNA clone 93O21XP 3', mRNA
sequence
Length = 500
Score = 46.1 bits (23), Expect = 0.031
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 2123 tacgggttcacggggaagctgccgcggacgtggttcaagtcggtggaccagctgcccatg 2182
||||||||||| || ||| || | ||||||||||| ||||||||| | ||||| || |||
Sbjct: 195 tacgggttcacaggaaagttggcccggacgtggtttaagtcggtgaagcagctnccgatg 254
Query: 2183 aa 2184
||
Sbjct: 255 aa 256
>gb|BE525356.1|BE525356 M7G1STM Arabidopsis developing seed Arabidopsis thaliana cDNA clone
M7G1 5', mRNA sequence
Length = 211
Score = 46.1 bits (23), Expect = 0.031
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 1501 tgtcaagttcaccatgggcctgttcgagaaccctt 1535
|||||||||||||||||| || || ||||||||||
Sbjct: 6 tgtcaagttcaccatgggtctttttgagaaccctt 40
>gb|AV784755.1|AV784755 AV784755 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-07-P20 3', mRNA
sequence
Length = 619
Score = 46.1 bits (23), Expect = 0.031
Identities = 116/147 (78%)
Strand = Plus / Minus
Query: 2063 gtggcggcgtggctgccagggtcggaggggcagggcgtggcggacgtgctgttcggcgac 2122
|||||||||||||| || || |||| || || || ||||| || || ||||||| ||
Sbjct: 338 gtggcggcgtggcttccgggaacggaaggtcaaggagtggctgatgttttgttcggagat 279
Query: 2123 tacgggttcacggggaagctgccgcggacgtggttcaagtcggtggaccagctgcccatg 2182
|| || ||||| ||||| || | ||||||||||| ||| | ||||| ||| |||| |||
Sbjct: 278 tatggattcaccgggaaattggctcggacgtggtttaagacagtggatcagttgccgatg 219
Query: 2183 aacgtgggcgacgcgcactacgacccg 2209
||||| || ||| |||| |||||||||
Sbjct: 218 aacgttggtgacccgcattacgacccg 192
>gb|AV822340.1|AV822340 AV822340 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-05-B18 5',
mRNA sequence
Length = 608
Score = 46.1 bits (23), Expect = 0.031
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 461 aagtacaaggacccaaagcagcc 483
|||||||||||||||||||||||
Sbjct: 214 aagtacaaggacccaaagcagcc 236
>gb|AV829152.1|AV829152 AV829152 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-40-A02 5',
mRNA sequence
Length = 572
Score = 46.1 bits (23), Expect = 0.031
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 461 aagtacaaggacccaaagcagcc 483
|||||||||||||||||||||||
Sbjct: 232 aagtacaaggacccaaagcagcc 254
>gb|AV830791.1|AV830791 AV830791 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-76-L24 5',
mRNA sequence
Length = 294
Score = 46.1 bits (23), Expect = 0.031
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 461 aagtacaaggacccaaagcagcc 483
|||||||||||||||||||||||
Sbjct: 213 aagtacaaggacccaaagcagcc 235
>gb|BP801280.1|BP801280 BP801280 RAFL14 Arabidopsis thaliana cDNA clone RAFL23-19-C23 5',
mRNA sequence
Length = 375
Score = 46.1 bits (23), Expect = 0.031
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 461 aagtacaaggacccaaagcagcc 483
|||||||||||||||||||||||
Sbjct: 213 aagtacaaggacccaaagcagcc 235
>gb|BP805418.1|BP805418 BP805418 RAFL16 Arabidopsis thaliana cDNA clone RAFL24-05-N10 5',
mRNA sequence
Length = 412
Score = 46.1 bits (23), Expect = 0.031
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 461 aagtacaaggacccaaagcagcc 483
|||||||||||||||||||||||
Sbjct: 244 aagtacaaggacccaaagcagcc 266
>gb|BP809333.1|BP809333 BP809333 RAFL16 Arabidopsis thaliana cDNA clone RAFL24-21-D04 5',
mRNA sequence
Length = 398
Score = 46.1 bits (23), Expect = 0.031
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 461 aagtacaaggacccaaagcagcc 483
|||||||||||||||||||||||
Sbjct: 249 aagtacaaggacccaaagcagcc 271
>gb|BP813583.1|BP813583 BP813583 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-06-N24 5',
mRNA sequence
Length = 383
Score = 46.1 bits (23), Expect = 0.031
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 461 aagtacaaggacccaaagcagcc 483
|||||||||||||||||||||||
Sbjct: 233 aagtacaaggacccaaagcagcc 255
>gb|BP825255.1|BP825255 BP825255 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-68-A01 5',
mRNA sequence
Length = 378
Score = 46.1 bits (23), Expect = 0.031
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 461 aagtacaaggacccaaagcagcc 483
|||||||||||||||||||||||
Sbjct: 235 aagtacaaggacccaaagcagcc 257
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 763,618
Number of Sequences: 1013581
Number of extensions: 763618
Number of successful extensions: 54005
Number of sequences better than 0.5: 75
Number of HSP's better than 0.5 without gapping: 77
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 52309
Number of HSP's gapped (non-prelim): 1695
length of query: 2611
length of database: 908,940,872
effective HSP length: 21
effective length of query: 2590
effective length of database: 887,655,671
effective search space: 2299028187890
effective search space used: 2299028187890
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)