BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= L18925.2.1
(1221 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DR750029.1|DR750029 78-L022529-065-010-F10-SeLA MPIZ-ADI... 111 3e-022
gb|DR750030.1|DR750030 78-L022530-065-010-F10-SeLB MPIZ-ADI... 111 3e-022
emb|X53579.1|ATAGAMSG A.thaliana agamous (AG) gene 111 3e-022
ref|NM_118013.2| Arabidopsis thaliana AG (AGAMOUS); transcr... 103 7e-020
emb|AX380953.1| Sequence 7 from Patent WO0210415 76 2e-011
emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long... 76 2e-011
emb|AL021711.2|ATF13C5 Arabidopsis thaliana DNA chromosome ... 76 2e-011
emb|AL161549.2|ATCHRIV49 Arabidopsis thaliana DNA chromosom... 76 2e-011
ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complet... 76 2e-011
gb|CF773945.1|CF773945 AG_FSL_25A05 Arabidopsis ag-1 35S:AG... 74 6e-011
gb|DR751298.1|DR751298 13-L022242-065-008-E02-SeLA MPIZ-ADI... 70 1e-009
gb|M55553.1|ATHAGL5A Arabidopsis thaliana transcription fac... 70 1e-009
ref|NM_180046.1| Arabidopsis thaliana SHP2 (SHATTERPROOF 2)... 70 1e-009
ref|NM_129844.3| Arabidopsis thaliana SHP2 (SHATTERPROOF 2)... 70 1e-009
gb|DR751299.1|DR751299 13-L022243-065-008-E02-SeLB MPIZ-ADI... 66 2e-008
emb|AX320930.1| Sequence 6 from Patent WO0179517 64 6e-008
gb|AC006931.6| Arabidopsis thaliana chromosome 2 clone F7D1... 64 6e-008
gb|AY727646.1| Arabidopsis thaliana ecotype Ler-0 SHATTERPR... 64 6e-008
gb|AY727647.1| Arabidopsis thaliana ecotype Wassilewskija S... 64 6e-008
gb|AY727648.1| Arabidopsis thaliana ecotype Co-1 SHATTERPRO... 64 6e-008
gb|AY727649.1| Arabidopsis thaliana ecotype Es-0 SHATTERPRO... 64 6e-008
gb|AY727650.1| Arabidopsis thaliana ecotype Ita-0 SHATTERPR... 64 6e-008
gb|AY727651.1| Arabidopsis thaliana ecotype Kas-1 SHATTERPR... 64 6e-008
gb|AY727652.1| Arabidopsis thaliana ecotype Li-3 SHATTERPRO... 64 6e-008
gb|AY727653.1| Arabidopsis thaliana ecotype Lu-1 SHATTERPRO... 64 6e-008
gb|AY727654.1| Arabidopsis thaliana ecotype Mt-0 SHATTERPRO... 64 6e-008
gb|AY727655.1| Arabidopsis thaliana ecotype PLA-0 SHATTERPR... 64 6e-008
gb|AY727656.1| Arabidopsis thaliana ecotype Pog-0 SHATTERPR... 64 6e-008
gb|AY727657.1| Arabidopsis thaliana ecotype Tsu-1 SHATTERPR... 64 6e-008
gb|AY727658.1| Arabidopsis thaliana ecotype PHW-1 SHATTERPR... 64 6e-008
gb|AY727659.1| Arabidopsis thaliana ecotype PHW-33 SHATTERP... 64 6e-008
gb|AY727660.1| Arabidopsis thaliana ecotype Kondara SHATTER... 64 6e-008
gb|AY727661.1| Arabidopsis thaliana ecotype An-2 SHATTERPRO... 64 6e-008
gb|AY727662.1| Arabidopsis thaliana ecotype Br-0 SHATTERPRO... 64 6e-008
gb|AY727663.1| Arabidopsis thaliana ecotype Cha-0 SHATTERPR... 64 6e-008
gb|AY727664.1| Arabidopsis thaliana ecotype Di-0 SHATTERPRO... 64 6e-008
gb|AY727665.1| Arabidopsis thaliana ecotype Est-1 SHATTERPR... 64 6e-008
gb|AY727666.1| Arabidopsis thaliana ecotype Kl-5 SHATTERPRO... 64 6e-008
gb|AY727667.1| Arabidopsis thaliana ecotype Ko-2 SHATTERPRO... 64 6e-008
gb|AY727668.1| Arabidopsis thaliana ecotype Lip-0 SHATTERPR... 64 6e-008
gb|AY727669.1| Arabidopsis thaliana ecotype 9481B SHATTERPR... 64 6e-008
ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complet... 64 6e-008
gb|M55550.1|ATHAGL1A Arabidopsis thaliana transcription fac... 56 1e-005
gb|AY086196.1| Arabidopsis thaliana clone 22339 mRNA, compl... 56 1e-005
ref|NM_115740.2| Arabidopsis thaliana SHP1 (SHATTERPROOF 1)... 56 1e-005
emb|BX323641.1| Arabidopsis thaliana transposon insertion S... 52 2e-004
emb|BX323649.1| Arabidopsis thaliana transposon insertion S... 52 2e-004
emb|BX323659.1| Arabidopsis thaliana transposon insertion S... 52 2e-004
emb|AL772917.1| Arabidopsis thaliana transposon insertion S... 52 2e-004
emb|AL772966.1| Arabidopsis thaliana transposon insertion S... 52 2e-004
emb|AL824144.1| Arabidopsis thaliana transposon insertion S... 52 2e-004
emb|AL824175.1| Arabidopsis thaliana transposon insertion S... 52 2e-004
emb|AL772844.1| Arabidopsis thaliana transposon insertion S... 52 2e-004
emb|AL772848.1| Arabidopsis thaliana transposon insertion S... 52 2e-004
emb|AL772854.1| Arabidopsis thaliana transposon insertion S... 52 2e-004
emb|AL772964.1| Arabidopsis thaliana transposon insertion S... 52 2e-004
gb|AY026995.1|AY026995 AY026995 Arabidopsis thaliana Landsb... 48 0.004
gb|AV822813.1|AV822813 AV822813 RAFL5 Arabidopsis thaliana ... 48 0.004
gb|CA781729.1|CA781729 047B06AF Infected Arabidopsis Leaf A... 48 0.004
gb|CB258385.1|CB258385 30-E011801-014-004-K07-T7R MPIZ-ADIS... 48 0.004
gb|CB258393.1|CB258393 30-E011797-014-004-K07-T7R MPIZ-ADIS... 48 0.004
gb|BP827217.1|BP827217 BP827217 RAFL19 Arabidopsis thaliana... 48 0.004
gb|DR749737.1|DR749737 94-L022529-065-010-F12-SeLA MPIZ-ADI... 48 0.004
gb|DR749738.1|DR749738 94-L022530-065-010-F12-SeLB MPIZ-ADI... 48 0.004
gb|DR750025.1|DR750025 78-L022242-065-008-F10-SeLA MPIZ-ADI... 48 0.004
gb|U33473.1|ATU33473 Arabidopsis thaliana agamous-like 8 (A... 48 0.004
gb|AF386929.1|AF386929 Arabidopsis thaliana floral homeotic... 48 0.004
gb|AY072463.1| Arabidopsis thaliana floral homeotic protein... 48 0.004
emb|AX590063.1| Sequence 245 from Patent WO02081695 48 0.004
emb|BX833510.1|CNS0A0IS Arabidopsis thaliana Full-length cD... 48 0.004
dbj|AB008269.1| Arabidopsis thaliana genomic DNA, chromosom... 48 0.004
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 48 0.004
ref|NM_125484.2| Arabidopsis thaliana AGL8 (AGAMOUS-LIKE 8)... 48 0.004
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 48 0.004
gb|AA728430.1|AA728430 33609 CD4-6 Arabidopsis thaliana cDN... 46 0.014
gb|BP796605.1|BP796605 BP796605 RAFL5 Arabidopsis thaliana ... 46 0.014
gb|DR750758.1|DR750758 41-L020098-065-001-A06-SeLA MPIZ-ADI... 46 0.014
gb|AF115815.1|AF115815 Arabidopsis thaliana cultivar Co-1 f... 46 0.014
gb|AF115816.1|AF115816 Arabidopsis thaliana cultivar Bu-2 f... 46 0.014
gb|AF115817.1|AF115817 Arabidopsis thaliana cultivar Chi-1 ... 46 0.014
gb|AF115818.1|AF115818 Arabidopsis thaliana cultivar Bu-0 f... 46 0.014
gb|AF115819.1|AF115819 Arabidopsis thaliana cultivar Corsca... 46 0.014
gb|AF115820.1|AF115820 Arabidopsis thaliana cultivar J1-1 f... 46 0.014
gb|AF115821.1|AF115821 Arabidopsis thaliana cultivar Li-3 f... 46 0.014
gb|AF115822.1|AF115822 Arabidopsis thaliana cultivar Gr-3 f... 46 0.014
gb|AF115823.1|AF115823 Arabidopsis thaliana cultivar Lisse ... 46 0.014
gb|AF115824.1|AF115824 Arabidopsis thaliana cultivar Kent f... 46 0.014
gb|AF115825.1|AF115825 Arabidopsis thaliana cultivar Lisse ... 46 0.014
gb|AF115826.1|AF115826 Arabidopsis thaliana cultivar Kent,U... 46 0.014
gb|AF115827.1|AF115827 Arabidopsis thaliana cultivar Ler fl... 46 0.014
gb|AF115828.1|AF115828 Arabidopsis thaliana cultivar Cvi-0 ... 46 0.014
gb|AF115829.1|AF115829 Arabidopsis thaliana cultivar Col fl... 46 0.014
gb|AF115830.1|AF115830 Arabidopsis thaliana cultivar Bretag... 46 0.014
dbj|AB035137.1| Arabidopsis thaliana genes for blue copper ... 46 0.014
gb|AF296825.1|F5O24 Arabidopsis thaliana BAC F5O24 46 0.014
gb|AY089002.1| Arabidopsis thaliana clone 1480 mRNA, comple... 46 0.014
emb|BX465236.1| Arabidopsis thaliana transposon insertion S... 46 0.014
dbj|D30807.1|ATHMADSBOX Arabidopsis thaliana mRNA (homeotic... 46 0.014
ref|NM_122031.2| Arabidopsis thaliana PI (PISTILLATA); DNA ... 46 0.014
gb|F14228.1|F14228 ATTS5150 Ors-B Arabidopsis thaliana cDNA... 44 0.056
gb|F14178.1|F14178 ATTS5100 Ors-B Arabidopsis thaliana cDNA... 44 0.056
gb|AI993585.1|AI993585 701496687 A. thaliana, Ohio State cl... 44 0.056
gb|BE524598.1|BE524598 M51H6STM Arabidopsis developing seed... 44 0.056
gb|BG459170.1|BG459170 M64G03STM Arabidopsis developing see... 44 0.056
gb|BP868458.1|BP868458 BP868458 RAFL21 Arabidopsis thaliana... 44 0.056
gb|AF312663.1|AF312663 Arabidopsis thaliana MADS-box protei... 44 0.056
emb|AX320929.1| Sequence 5 from Patent WO0179517 44 0.056
gb|BT003841.1| Arabidopsis thaliana clone RAFL15-25-E19 (R2... 44 0.056
gb|AY087639.1| Arabidopsis thaliana clone 37288 mRNA, compl... 44 0.056
emb|BX825810.1|CNS0A537 Arabidopsis thaliana Full-length cD... 44 0.056
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 44 0.056
gb|AY727622.1| Arabidopsis thaliana ecotype Ler-0 SHATTERPR... 44 0.056
gb|AY727623.1| Arabidopsis thaliana ecotype Wassilewskija S... 44 0.056
gb|AY727624.1| Arabidopsis thaliana ecotype Co-1 SHATTERPRO... 44 0.056
gb|AY727625.1| Arabidopsis thaliana ecotype Es-0 SHATTERPRO... 44 0.056
gb|AY727626.1| Arabidopsis thaliana ecotype Ita-0 SHATTERPR... 44 0.056
gb|AY727627.1| Arabidopsis thaliana ecotype Kas-1 SHATTERPR... 44 0.056
gb|AY727628.1| Arabidopsis thaliana ecotype Li-3 SHATTERPRO... 44 0.056
gb|AY727629.1| Arabidopsis thaliana ecotype Lu-1 SHATTERPRO... 44 0.056
gb|AY727630.1| Arabidopsis thaliana ecotype Mt-0 SHATTERPRO... 44 0.056
gb|AY727631.1| Arabidopsis thaliana ecotype PLA-0 SHATTERPR... 44 0.056
gb|AY727632.1| Arabidopsis thaliana ecotype Pog-0 SHATTERPR... 44 0.056
gb|AY727633.1| Arabidopsis thaliana ecotype Tsu-1 SHATTERPR... 44 0.056
gb|AY727634.1| Arabidopsis thaliana ecotype PHW-1 SHATTERPR... 44 0.056
gb|AY727635.1| Arabidopsis thaliana ecotype PHW-33 SHATTERP... 44 0.056
gb|AY727636.1| Arabidopsis thaliana ecotype Kondara SHATTER... 44 0.056
gb|AY727637.1| Arabidopsis thaliana ecotype An-2 SHATTERPRO... 44 0.056
gb|AY727638.1| Arabidopsis thaliana ecotype Br-0 SHATTERPRO... 44 0.056
gb|AY727639.1| Arabidopsis thaliana ecotype Di-0 SHATTERPRO... 44 0.056
gb|AY727640.1| Arabidopsis thaliana ecotype Est-1 SHATTERPR... 44 0.056
gb|AY727641.1| Arabidopsis thaliana ecotype Kl-5 SHATTERPRO... 44 0.056
gb|AY727642.1| Arabidopsis thaliana ecotype Ko-2 SHATTERPRO... 44 0.056
gb|AY727643.1| Arabidopsis thaliana ecotype Lip-0 SHATTERPR... 44 0.056
gb|AY727644.1| Arabidopsis thaliana ecotype 9481B SHATTERPR... 44 0.056
emb|AL137080.2|ATF28O9 Arabidopsis thaliana DNA chromosome ... 44 0.056
emb|AL353032.1|ATT20N10 Arabidopsis thaliana DNA chromosome... 44 0.056
dbj|AK220679.1| Arabidopsis thaliana mRNA for MADS transcri... 44 0.056
dbj|AK222220.1| Arabidopsis thaliana mRNA for MADS transcri... 44 0.056
ref|NM_115599.2| Arabidopsis thaliana AGL18; transcription ... 44 0.056
ref|NM_202721.1| Arabidopsis thaliana AGL18; transcription ... 44 0.056
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 44 0.056
gb|BZ663057.1|BZ663057 SALK_026551.47.05.x Arabidopsis thal... 42 0.22
gb|BE038223.1|BE038223 AA10E11 AA Arabidopsis thaliana cDNA... 42 0.22
gb|DR750275.1|DR750275 65-L020098-065-001-A09-SeLA MPIZ-ADI... 42 0.22
gb|DR750276.1|DR750276 65-L020099-065-001-A09-SeLB MPIZ-ADI... 42 0.22
gb|AF211171.1|AF211171 Arabidopsis thaliana short vegetativ... 42 0.22
emb|AX052687.1| Sequence 1 from Patent WO0070053 42 0.22
emb|AX052689.1| Sequence 3 from Patent WO0070053 42 0.22
emb|AX052691.1| Sequence 5 from Patent WO0070053 42 0.22
emb|AX052692.1| Sequence 6 from Patent WO0070053 42 0.22
emb|AX052693.1| Sequence 7 from Patent WO0070053 42 0.22
emb|AX506507.1| Sequence 1202 from Patent WO0216655 42 0.22
gb|AC006592.6| Arabidopsis thaliana chromosome 2 clone F14M... 42 0.22
emb|BX842431.1|CNS0A8GM Arabidopsis thaliana Full-length cD... 42 0.22
emb|BX842440.1|CNS0A8OH Arabidopsis thaliana Full-length cD... 42 0.22
emb|BX842447.1|CNS0A8UX Arabidopsis thaliana Full-length cD... 42 0.22
emb|BX842456.1|CNS0A915 Arabidopsis thaliana Full-length cD... 42 0.22
ref|NM_127820.2| Arabidopsis thaliana SVP (SHORT VEGETATIVE... 42 0.22
>gb|DR750029.1|DR750029 78-L022529-065-010-F10-SeLA MPIZ-ADIS-065d Arabidopsis thaliana cDNA
clone 010-F10, mRNA sequence
Length = 910
Score = 111 bits (56), Expect = 3e-022
Identities = 113/132 (85%)
Strand = Plus / Minus
Query: 889 tgccttcttgtacctctcaacagtagccttgacactgttgttggcatactcgtagaggcg 948
|||||||||||||||||||| |||| | || ||||||||||| | ||||| ||||| ||
Sbjct: 367 tgccttcttgtacctctcaatagtaccttttacactgttgttagagtactcatagagacg 308
Query: 949 accacggctagagaagacgatgagggccacctcagcgtcgcagaggacggagagctcgta 1008
||||||||||||||| |||||||| || || ||||| || ||||| || |||||||||||
Sbjct: 307 accacggctagagaaaacgatgagtgcgacttcagcatcacagagaacagagagctcgta 248
Query: 1009 cgccttcttgag 1020
|| ||||||||
Sbjct: 247 agctttcttgag 236
>gb|DR750030.1|DR750030 78-L022530-065-010-F10-SeLB MPIZ-ADIS-065d Arabidopsis thaliana cDNA
clone 010-F10, mRNA sequence
Length = 838
Score = 111 bits (56), Expect = 3e-022
Identities = 113/132 (85%)
Strand = Plus / Plus
Query: 889 tgccttcttgtacctctcaacagtagccttgacactgttgttggcatactcgtagaggcg 948
|||||||||||||||||||| |||| | || ||||||||||| | ||||| ||||| ||
Sbjct: 616 tgccttcttgtacctctcaatagtaccttttacactgttgttagagtactcatagagacg 675
Query: 949 accacggctagagaagacgatgagggccacctcagcgtcgcagaggacggagagctcgta 1008
||||||||||||||| |||||||| || || ||||| || ||||| || |||||||||||
Sbjct: 676 accacggctagagaaaacgatgagtgcgacttcagcatcacagagaacagagagctcgta 735
Query: 1009 cgccttcttgag 1020
|| ||||||||
Sbjct: 736 agctttcttgag 747
>emb|X53579.1|ATAGAMSG A.thaliana agamous (AG) gene
Length = 1458
Score = 111 bits (56), Expect = 3e-022
Identities = 113/132 (85%)
Strand = Plus / Minus
Query: 889 tgccttcttgtacctctcaacagtagccttgacactgttgttggcatactcgtagaggcg 948
|||||||||||||||||||| |||| | || ||||||||||| | ||||| ||||| ||
Sbjct: 778 tgccttcttgtacctctcaatagtaccttttacactgttgttagagtactcatagagacg 719
Query: 949 accacggctagagaagacgatgagggccacctcagcgtcgcagaggacggagagctcgta 1008
||||||||||||||| |||||||| || || ||||| || ||||| || |||||||||||
Sbjct: 718 accacggctagagaaaacgatgagtgcgacttcagcatcacagagaacagagagctcgta 659
Query: 1009 cgccttcttgag 1020
|| ||||||||
Sbjct: 658 agctttcttgag 647
>ref|NM_118013.2| Arabidopsis thaliana AG (AGAMOUS); transcription factor AT4G18960
(AG) mRNA, partial cds
Length = 1532
Score = 103 bits (52), Expect = 7e-020
Identities = 112/132 (84%)
Strand = Plus / Minus
Query: 889 tgccttcttgtacctctcaacagtagccttgacactgttgttggcatactcgtagaggcg 948
|||||||||||||||||||| ||| | || ||||||||||| | ||||| ||||| ||
Sbjct: 770 tgccttcttgtacctctcaatagtcccttttacactgttgttagagtactcatagagacg 711
Query: 949 accacggctagagaagacgatgagggccacctcagcgtcgcagaggacggagagctcgta 1008
|||||||||||||||||||||||| || || ||||| || || || || |||||||||||
Sbjct: 710 accacggctagagaagacgatgagtgcgacttcagcatcacaaagaacagagagctcgta 651
Query: 1009 cgccttcttgag 1020
|| ||||||||
Sbjct: 650 agctttcttgag 639
>emb|AX380953.1| Sequence 7 from Patent WO0210415
Length = 5497
Score = 75.8 bits (38), Expect = 2e-011
Identities = 74/86 (86%)
Strand = Plus / Minus
Query: 935 tactcgtagaggcgaccacggctagagaagacgatgagggccacctcagcgtcgcagagg 994
||||| ||||| |||||||||||||||||||||||||| || || ||||| || || ||
Sbjct: 2285 tactcatagagacgaccacggctagagaagacgatgagtgcgacttcagcatcacaaaga 2226
Query: 995 acggagagctcgtacgccttcttgag 1020
|| ||||||||||| || ||||||||
Sbjct: 2225 acagagagctcgtaagctttcttgag 2200
>emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long arm
Length = 14497843
Score = 75.8 bits (38), Expect = 2e-011
Identities = 74/86 (86%)
Strand = Plus / Minus
Query: 935 tactcgtagaggcgaccacggctagagaagacgatgagggccacctcagcgtcgcagagg 994
||||| ||||| |||||||||||||||||||||||||| || || ||||| || || ||
Sbjct: 6296890 tactcatagagacgaccacggctagagaagacgatgagtgcgacttcagcatcacaaaga 6296831
Query: 995 acggagagctcgtacgccttcttgag 1020
|| ||||||||||| || ||||||||
Sbjct: 6296830 acagagagctcgtaagctttcttgag 6296805
>emb|AL021711.2|ATF13C5 Arabidopsis thaliana DNA chromosome 4, BAC clone F13C5 (ESSA project)
Length = 119111
Score = 75.8 bits (38), Expect = 2e-011
Identities = 74/86 (86%)
Strand = Plus / Minus
Query: 935 tactcgtagaggcgaccacggctagagaagacgatgagggccacctcagcgtcgcagagg 994
||||| ||||| |||||||||||||||||||||||||| || || ||||| || || ||
Sbjct: 48903 tactcatagagacgaccacggctagagaagacgatgagtgcgacttcagcatcacaaaga 48844
Query: 995 acggagagctcgtacgccttcttgag 1020
|| ||||||||||| || ||||||||
Sbjct: 48843 acagagagctcgtaagctttcttgag 48818
>emb|AL161549.2|ATCHRIV49 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 49
Length = 199075
Score = 75.8 bits (38), Expect = 2e-011
Identities = 74/86 (86%)
Strand = Plus / Minus
Query: 935 tactcgtagaggcgaccacggctagagaagacgatgagggccacctcagcgtcgcagagg 994
||||| ||||| |||||||||||||||||||||||||| || || ||||| || || ||
Sbjct: 162273 tactcatagagacgaccacggctagagaagacgatgagtgcgacttcagcatcacaaaga 162214
Query: 995 acggagagctcgtacgccttcttgag 1020
|| ||||||||||| || ||||||||
Sbjct: 162213 acagagagctcgtaagctttcttgag 162188
>ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complete sequence
Length = 18585042
Score = 75.8 bits (38), Expect = 2e-011
Identities = 74/86 (86%)
Strand = Plus / Minus
Query: 935 tactcgtagaggcgaccacggctagagaagacgatgagggccacctcagcgtcgcagagg 994
||||| ||||| |||||||||||||||||||||||||| || || ||||| || || ||
Sbjct: 10384145 tactcatagagacgaccacggctagagaagacgatgagtgcgacttcagcatcacaaaga 10384086
Query: 995 acggagagctcgtacgccttcttgag 1020
|| ||||||||||| || ||||||||
Sbjct: 10384085 acagagagctcgtaagctttcttgag 10384060
>gb|CF773945.1|CF773945 AG_FSL_25A05 Arabidopsis ag-1 35S:AG-GR forward subtraction library
Arabidopsis thaliana cDNA clone 25A05, mRNA sequence
Length = 210
Score = 73.8 bits (37), Expect = 6e-011
Identities = 73/85 (85%)
Strand = Plus / Plus
Query: 936 actcgtagaggcgaccacggctagagaagacgatgagggccacctcagcgtcgcagagga 995
|||| ||||| ||||||||||||||||| |||||||| || || ||||| || ||||| |
Sbjct: 1 actcatagagacgaccacggctagagaaaacgatgagtgcgacttcagcatcacagagaa 60
Query: 996 cggagagctcgtacgccttcttgag 1020
| ||||||||||| || ||||||||
Sbjct: 61 cagagagctcgtaagctttcttgag 85
>gb|DR751298.1|DR751298 13-L022242-065-008-E02-SeLA MPIZ-ADIS-065d Arabidopsis thaliana cDNA
clone 008-E02, mRNA sequence
Length = 779
Score = 69.9 bits (35), Expect = 1e-009
Identities = 134/167 (80%)
Strand = Plus / Minus
Query: 920 acactgttgttggcatactcgtagaggcgaccacggctagagaagacgatgagggccacc 979
|||||||||||||| ||||||||||| || || || | ||||||| || || || |||
Sbjct: 331 acactgttgttggcgtactcgtagagacggcctcgagtggagaagatgacaagagcaacc 272
Query: 980 tcagcgtcgcagaggacggagagctcgtacgccttcttgaggagcccattgcggcgcttg 1039
|||||||| || | ||| |||||||| || || |||||||| | |||||||| || |||
Sbjct: 271 tcagcgtcacacaagacagagagctcataagctttcttgagtaaaccattgcgtcgtttg 212
Query: 1040 cagaaggtgacctgccggctcgtgttgttctcgatcctcttgatctc 1086
||||| ||||| || || |||| ||||||| |||||||| |||||
Sbjct: 211 cagaaagtgacttgacgattcgtagtgttctctatcctctttatctc 165
>gb|M55553.1|ATHAGL5A Arabidopsis thaliana transcription factor (AGL5) mRNA, complete cds
Length = 963
Score = 69.9 bits (35), Expect = 1e-009
Identities = 134/167 (80%)
Strand = Plus / Minus
Query: 920 acactgttgttggcatactcgtagaggcgaccacggctagagaagacgatgagggccacc 979
|||||||||||||| ||||||||||| || || || | ||||||| || || || |||
Sbjct: 307 acactgttgttggcgtactcgtagagacggcctcgagtggagaagatgacaagagcaacc 248
Query: 980 tcagcgtcgcagaggacggagagctcgtacgccttcttgaggagcccattgcggcgcttg 1039
|||||||| || | ||| |||||||| || || |||||||| | |||||||| || |||
Sbjct: 247 tcagcgtcacacaagacagagagctcataagctttcttgagtaaaccattgcgtcgtttg 188
Query: 1040 cagaaggtgacctgccggctcgtgttgttctcgatcctcttgatctc 1086
||||| ||||| || || |||| ||||||| |||||||| |||||
Sbjct: 187 cagaaagtgacttgacgattcgtagtgttctctatcctctttatctc 141
>ref|NM_180046.1| Arabidopsis thaliana SHP2 (SHATTERPROOF 2); transcription factor
AT2G42830 (SHP2) transcript variant AT2G42830.2 mRNA,
complete cds
Length = 1030
Score = 69.9 bits (35), Expect = 1e-009
Identities = 134/167 (80%)
Strand = Plus / Minus
Query: 920 acactgttgttggcatactcgtagaggcgaccacggctagagaagacgatgagggccacc 979
|||||||||||||| ||||||||||| || || || | ||||||| || || || |||
Sbjct: 306 acactgttgttggcgtactcgtagagacggcctcgagtggagaagatgacaagagcaacc 247
Query: 980 tcagcgtcgcagaggacggagagctcgtacgccttcttgaggagcccattgcggcgcttg 1039
|||||||| || | ||| |||||||| || || |||||||| | |||||||| || |||
Sbjct: 246 tcagcgtcacacaagacagagagctcataagctttcttgagtaaaccattgcgtcgtttg 187
Query: 1040 cagaaggtgacctgccggctcgtgttgttctcgatcctcttgatctc 1086
||||| ||||| || || |||| ||||||| |||||||| |||||
Sbjct: 186 cagaaagtgacttgacgattcgtagtgttctctatcctctttatctc 140
>ref|NM_129844.3| Arabidopsis thaliana SHP2 (SHATTERPROOF 2); transcription factor
AT2G42830 (SHP2) transcript variant AT2G42830.1 mRNA,
complete cds
Length = 1025
Score = 69.9 bits (35), Expect = 1e-009
Identities = 134/167 (80%)
Strand = Plus / Minus
Query: 920 acactgttgttggcatactcgtagaggcgaccacggctagagaagacgatgagggccacc 979
|||||||||||||| ||||||||||| || || || | ||||||| || || || |||
Sbjct: 307 acactgttgttggcgtactcgtagagacggcctcgagtggagaagatgacaagagcaacc 248
Query: 980 tcagcgtcgcagaggacggagagctcgtacgccttcttgaggagcccattgcggcgcttg 1039
|||||||| || | ||| |||||||| || || |||||||| | |||||||| || |||
Sbjct: 247 tcagcgtcacacaagacagagagctcataagctttcttgagtaaaccattgcgtcgtttg 188
Query: 1040 cagaaggtgacctgccggctcgtgttgttctcgatcctcttgatctc 1086
||||| ||||| || || |||| ||||||| |||||||| |||||
Sbjct: 187 cagaaagtgacttgacgattcgtagtgttctctatcctctttatctc 141
>gb|DR751299.1|DR751299 13-L022243-065-008-E02-SeLB MPIZ-ADIS-065d Arabidopsis thaliana cDNA
clone 008-E02, mRNA sequence
Length = 834
Score = 65.9 bits (33), Expect = 2e-008
Identities = 129/161 (80%)
Strand = Plus / Plus
Query: 920 acactgttgttggcatactcgtagaggcgaccacggctagagaagacgatgagggccacc 979
|||||||||||||| ||||||||||| || || || | ||||||| || || || |||
Sbjct: 625 acactgttgttggcgtactcgtagagacggcctcgagtggagaagatgacaagagcaacc 684
Query: 980 tcagcgtcgcagaggacggagagctcgtacgccttcttgaggagcccattgcggcgcttg 1039
|||||||| || | ||| |||||||| || || |||||||| | |||||||| || |||
Sbjct: 685 tcagcgtcacacaagacagagagctcataagctttcttgagtaaaccattgcgtcgtttg 744
Query: 1040 cagaaggtgacctgccggctcgtgttgttctcgatcctctt 1080
||||| ||||| || || || | |||||||| ||||||||
Sbjct: 745 cagaaagtgacttgacgattcctattgttctctatcctctt 785
>emb|AX320930.1| Sequence 6 from Patent WO0179517
Length = 6138
Score = 63.9 bits (32), Expect = 6e-008
Identities = 131/164 (79%)
Strand = Plus / Minus
Query: 923 ctgttgttggcatactcgtagaggcgaccacggctagagaagacgatgagggccacctca 982
||||||||||| ||||||||||| || || || | ||||||| || || || ||||||
Sbjct: 2927 ctgttgttggcgtactcgtagagacggcctcgagtggagaagatgacaagagcaacctca 2868
Query: 983 gcgtcgcagaggacggagagctcgtacgccttcttgaggagcccattgcggcgcttgcag 1042
||||| || | ||| |||||||| || || |||||||| | |||||||| || ||||||
Sbjct: 2867 gcgtcacacaagacagagagctcataagctttcttgagtaaaccattgcgtcgtttgcag 2808
Query: 1043 aaggtgacctgccggctcgtgttgttctcgatcctcttgatctc 1086
|| ||||| || || |||| ||||||| |||||||| |||||
Sbjct: 2807 aaagtgacttgacgattcgtagtgttctctatcctctttatctc 2764
>gb|AC006931.6| Arabidopsis thaliana chromosome 2 clone F7D19 map m551, complete
sequence
Length = 115310
Score = 63.9 bits (32), Expect = 6e-008
Identities = 131/164 (79%)
Strand = Plus / Plus
Query: 923 ctgttgttggcatactcgtagaggcgaccacggctagagaagacgatgagggccacctca 982
||||||||||| ||||||||||| || || || | ||||||| || || || ||||||
Sbjct: 60918 ctgttgttggcgtactcgtagagacggcctcgagtggagaagatgacaagagcaacctca 60977
Query: 983 gcgtcgcagaggacggagagctcgtacgccttcttgaggagcccattgcggcgcttgcag 1042
||||| || | ||| |||||||| || || |||||||| | |||||||| || ||||||
Sbjct: 60978 gcgtcacacaagacagagagctcataagctttcttgagtaaaccattgcgtcgtttgcag 61037
Query: 1043 aaggtgacctgccggctcgtgttgttctcgatcctcttgatctc 1086
|| ||||| || || |||| ||||||| |||||||| |||||
Sbjct: 61038 aaagtgacttgacgattcgtagtgttctctatcctctttatctc 61081
>gb|AY727646.1| Arabidopsis thaliana ecotype Ler-0 SHATTERPROOF2 (SHP2) gene,
complete cds
Length = 4829
Score = 63.9 bits (32), Expect = 6e-008
Identities = 131/164 (79%)
Strand = Plus / Minus
Query: 923 ctgttgttggcatactcgtagaggcgaccacggctagagaagacgatgagggccacctca 982
||||||||||| ||||||||||| || || || | ||||||| || || || ||||||
Sbjct: 1731 ctgttgttggcgtactcgtagagacggcctcgagtggagaagatgacaagagcaacctca 1672
Query: 983 gcgtcgcagaggacggagagctcgtacgccttcttgaggagcccattgcggcgcttgcag 1042
||||| || | ||| |||||||| || || |||||||| | |||||||| || ||||||
Sbjct: 1671 gcgtcacacaagacagagagctcataagctttcttgagtaaaccattgcgtcgtttgcag 1612
Query: 1043 aaggtgacctgccggctcgtgttgttctcgatcctcttgatctc 1086
|| ||||| || || |||| ||||||| |||||||| |||||
Sbjct: 1611 aaagtgacttgacgattcgtagtgttctctatcctctttatctc 1568
>gb|AY727647.1| Arabidopsis thaliana ecotype Wassilewskija SHATTERPROOF2 (SHP2) gene,
complete cds
Length = 4749
Score = 63.9 bits (32), Expect = 6e-008
Identities = 131/164 (79%)
Strand = Plus / Minus
Query: 923 ctgttgttggcatactcgtagaggcgaccacggctagagaagacgatgagggccacctca 982
||||||||||| ||||||||||| || || || | ||||||| || || || ||||||
Sbjct: 1731 ctgttgttggcgtactcgtagagacggcctcgagtggagaagatgacaagagcaacctca 1672
Query: 983 gcgtcgcagaggacggagagctcgtacgccttcttgaggagcccattgcggcgcttgcag 1042
||||| || | ||| |||||||| || || |||||||| | |||||||| || ||||||
Sbjct: 1671 gcgtcacacaagacagagagctcataagctttcttgagtaaaccattgcgtcgtttgcag 1612
Query: 1043 aaggtgacctgccggctcgtgttgttctcgatcctcttgatctc 1086
|| ||||| || || |||| ||||||| |||||||| |||||
Sbjct: 1611 aaagtgacttgacgattcgtagtgttctctatcctctttatctc 1568
>gb|AY727648.1| Arabidopsis thaliana ecotype Co-1 SHATTERPROOF2 (SHP2) gene, complete
cds
Length = 4815
Score = 63.9 bits (32), Expect = 6e-008
Identities = 131/164 (79%)
Strand = Plus / Minus
Query: 923 ctgttgttggcatactcgtagaggcgaccacggctagagaagacgatgagggccacctca 982
||||||||||| ||||||||||| || || || | ||||||| || || || ||||||
Sbjct: 1731 ctgttgttggcgtactcgtagagacggcctcgagtggagaagatgacaagagcaacctca 1672
Query: 983 gcgtcgcagaggacggagagctcgtacgccttcttgaggagcccattgcggcgcttgcag 1042
||||| || | ||| |||||||| || || |||||||| | |||||||| || ||||||
Sbjct: 1671 gcgtcacacaagacagagagctcataagctttcttgagtaaaccattgcgtcgtttgcag 1612
Query: 1043 aaggtgacctgccggctcgtgttgttctcgatcctcttgatctc 1086
|| ||||| || || |||| ||||||| |||||||| |||||
Sbjct: 1611 aaagtgacttgacgattcgtagtgttctctatcctctttatctc 1568
>gb|AY727649.1| Arabidopsis thaliana ecotype Es-0 SHATTERPROOF2 (SHP2) gene, complete
cds
Length = 4781
Score = 63.9 bits (32), Expect = 6e-008
Identities = 131/164 (79%)
Strand = Plus / Minus
Query: 923 ctgttgttggcatactcgtagaggcgaccacggctagagaagacgatgagggccacctca 982
||||||||||| ||||||||||| || || || | ||||||| || || || ||||||
Sbjct: 1731 ctgttgttggcgtactcgtagagacggcctcgagtggagaagatgacaagagcaacctca 1672
Query: 983 gcgtcgcagaggacggagagctcgtacgccttcttgaggagcccattgcggcgcttgcag 1042
||||| || | ||| |||||||| || || |||||||| | |||||||| || ||||||
Sbjct: 1671 gcgtcacacaagacagagagctcataagctttcttgagtaaaccattgcgtcgtttgcag 1612
Query: 1043 aaggtgacctgccggctcgtgttgttctcgatcctcttgatctc 1086
|| ||||| || || |||| ||||||| |||||||| |||||
Sbjct: 1611 aaagtgacttgacgattcgtagtgttctctatcctctttatctc 1568
>gb|AY727650.1| Arabidopsis thaliana ecotype Ita-0 SHATTERPROOF2 (SHP2) gene,
complete cds
Length = 4820
Score = 63.9 bits (32), Expect = 6e-008
Identities = 131/164 (79%)
Strand = Plus / Minus
Query: 923 ctgttgttggcatactcgtagaggcgaccacggctagagaagacgatgagggccacctca 982
||||||||||| ||||||||||| || || || | ||||||| || || || ||||||
Sbjct: 1730 ctgttgttggcgtactcgtagagacggcctcgagtggagaagatgacaagagcaacctca 1671
Query: 983 gcgtcgcagaggacggagagctcgtacgccttcttgaggagcccattgcggcgcttgcag 1042
||||| || | ||| |||||||| || || |||||||| | |||||||| || ||||||
Sbjct: 1670 gcgtcacacaagacagagagctcataagctttcttgagtaaaccattgcgtcgtttgcag 1611
Query: 1043 aaggtgacctgccggctcgtgttgttctcgatcctcttgatctc 1086
|| ||||| || || |||| ||||||| |||||||| |||||
Sbjct: 1610 aaagtgacttgacgattcgtagtgttctctatcctctttatctc 1567
>gb|AY727651.1| Arabidopsis thaliana ecotype Kas-1 SHATTERPROOF2 (SHP2) gene,
complete cds
Length = 4819
Score = 63.9 bits (32), Expect = 6e-008
Identities = 131/164 (79%)
Strand = Plus / Minus
Query: 923 ctgttgttggcatactcgtagaggcgaccacggctagagaagacgatgagggccacctca 982
||||||||||| ||||||||||| || || || | ||||||| || || || ||||||
Sbjct: 1731 ctgttgttggcgtactcgtagagacggcctcgagtggagaagatgacaagagcaacctca 1672
Query: 983 gcgtcgcagaggacggagagctcgtacgccttcttgaggagcccattgcggcgcttgcag 1042
||||| || | ||| |||||||| || || |||||||| | |||||||| || ||||||
Sbjct: 1671 gcgtcacacaagacagagagctcataagctttcttgagtaaaccattgcgtcgtttgcag 1612
Query: 1043 aaggtgacctgccggctcgtgttgttctcgatcctcttgatctc 1086
|| ||||| || || |||| ||||||| |||||||| |||||
Sbjct: 1611 aaagtgacttgacgattcgtagtgttctctatcctctttatctc 1568
>gb|AY727652.1| Arabidopsis thaliana ecotype Li-3 SHATTERPROOF2 (SHP2) gene, complete
cds
Length = 4805
Score = 63.9 bits (32), Expect = 6e-008
Identities = 131/164 (79%)
Strand = Plus / Minus
Query: 923 ctgttgttggcatactcgtagaggcgaccacggctagagaagacgatgagggccacctca 982
||||||||||| ||||||||||| || || || | ||||||| || || || ||||||
Sbjct: 1731 ctgttgttggcgtactcgtagagacggcctcgagtggagaagatgacaagagcaacctca 1672
Query: 983 gcgtcgcagaggacggagagctcgtacgccttcttgaggagcccattgcggcgcttgcag 1042
||||| || | ||| |||||||| || || |||||||| | |||||||| || ||||||
Sbjct: 1671 gcgtcacacaagacagagagctcataagctttcttgagtaaaccattgcgtcgtttgcag 1612
Query: 1043 aaggtgacctgccggctcgtgttgttctcgatcctcttgatctc 1086
|| ||||| || || |||| ||||||| |||||||| |||||
Sbjct: 1611 aaagtgacttgacgattcgtagtgttctctatcctctttatctc 1568
>gb|AY727653.1| Arabidopsis thaliana ecotype Lu-1 SHATTERPROOF2 (SHP2) gene, complete
cds
Length = 4832
Score = 63.9 bits (32), Expect = 6e-008
Identities = 131/164 (79%)
Strand = Plus / Minus
Query: 923 ctgttgttggcatactcgtagaggcgaccacggctagagaagacgatgagggccacctca 982
||||||||||| ||||||||||| || || || | ||||||| || || || ||||||
Sbjct: 1730 ctgttgttggcgtactcgtagagacggcctcgagtggagaagatgacaagagcaacctca 1671
Query: 983 gcgtcgcagaggacggagagctcgtacgccttcttgaggagcccattgcggcgcttgcag 1042
||||| || | ||| |||||||| || || |||||||| | |||||||| || ||||||
Sbjct: 1670 gcgtcacacaagacagagagctcataagctttcttgagtaaaccattgcgtcgtttgcag 1611
Query: 1043 aaggtgacctgccggctcgtgttgttctcgatcctcttgatctc 1086
|| ||||| || || |||| ||||||| |||||||| |||||
Sbjct: 1610 aaagtgacttgacgattcgtagtgttctctatcctctttatctc 1567
>gb|AY727654.1| Arabidopsis thaliana ecotype Mt-0 SHATTERPROOF2 (SHP2) gene, complete
cds
Length = 4807
Score = 63.9 bits (32), Expect = 6e-008
Identities = 131/164 (79%)
Strand = Plus / Minus
Query: 923 ctgttgttggcatactcgtagaggcgaccacggctagagaagacgatgagggccacctca 982
||||||||||| ||||||||||| || || || | ||||||| || || || ||||||
Sbjct: 1731 ctgttgttggcgtactcgtagagacggcctcgagtggagaagatgacaagagcaacctca 1672
Query: 983 gcgtcgcagaggacggagagctcgtacgccttcttgaggagcccattgcggcgcttgcag 1042
||||| || | ||| |||||||| || || |||||||| | |||||||| || ||||||
Sbjct: 1671 gcgtcacacaagacagagagctcataagctttcttgagtaaaccattgcgtcgtttgcag 1612
Query: 1043 aaggtgacctgccggctcgtgttgttctcgatcctcttgatctc 1086
|| ||||| || || |||| ||||||| |||||||| |||||
Sbjct: 1611 aaagtgacttgacgattcgtagtgttctctatcctctttatctc 1568
>gb|AY727655.1| Arabidopsis thaliana ecotype PLA-0 SHATTERPROOF2 (SHP2) gene,
complete cds
Length = 4822
Score = 63.9 bits (32), Expect = 6e-008
Identities = 131/164 (79%)
Strand = Plus / Minus
Query: 923 ctgttgttggcatactcgtagaggcgaccacggctagagaagacgatgagggccacctca 982
||||||||||| ||||||||||| || || || | ||||||| || || || ||||||
Sbjct: 1731 ctgttgttggcgtactcgtagagacggcctcgagtggagaagatgacaagagcaacctca 1672
Query: 983 gcgtcgcagaggacggagagctcgtacgccttcttgaggagcccattgcggcgcttgcag 1042
||||| || | ||| |||||||| || || |||||||| | |||||||| || ||||||
Sbjct: 1671 gcgtcacacaagacagagagctcataagctttcttgagtaaaccattgcgtcgtttgcag 1612
Query: 1043 aaggtgacctgccggctcgtgttgttctcgatcctcttgatctc 1086
|| ||||| || || |||| ||||||| |||||||| |||||
Sbjct: 1611 aaagtgacttgacgattcgtagtgttctctatcctctttatctc 1568
>gb|AY727656.1| Arabidopsis thaliana ecotype Pog-0 SHATTERPROOF2 (SHP2) gene,
complete cds
Length = 4805
Score = 63.9 bits (32), Expect = 6e-008
Identities = 131/164 (79%)
Strand = Plus / Minus
Query: 923 ctgttgttggcatactcgtagaggcgaccacggctagagaagacgatgagggccacctca 982
||||||||||| ||||||||||| || || || | ||||||| || || || ||||||
Sbjct: 1731 ctgttgttggcgtactcgtagagacggcctcgagtggagaagatgacaagagcaacctca 1672
Query: 983 gcgtcgcagaggacggagagctcgtacgccttcttgaggagcccattgcggcgcttgcag 1042
||||| || | ||| |||||||| || || |||||||| | |||||||| || ||||||
Sbjct: 1671 gcgtcacacaagacagagagctcataagctttcttgagtaaaccattgcgtcgtttgcag 1612
Query: 1043 aaggtgacctgccggctcgtgttgttctcgatcctcttgatctc 1086
|| ||||| || || |||| ||||||| |||||||| |||||
Sbjct: 1611 aaagtgacttgacgattcgtagtgttctctatcctctttatctc 1568
>gb|AY727657.1| Arabidopsis thaliana ecotype Tsu-1 SHATTERPROOF2 (SHP2) gene,
complete cds
Length = 4749
Score = 63.9 bits (32), Expect = 6e-008
Identities = 131/164 (79%)
Strand = Plus / Minus
Query: 923 ctgttgttggcatactcgtagaggcgaccacggctagagaagacgatgagggccacctca 982
||||||||||| ||||||||||| || || || | ||||||| || || || ||||||
Sbjct: 1731 ctgttgttggcgtactcgtagagacggcctcgagtggagaagatgacaagagcaacctca 1672
Query: 983 gcgtcgcagaggacggagagctcgtacgccttcttgaggagcccattgcggcgcttgcag 1042
||||| || | ||| |||||||| || || |||||||| | |||||||| || ||||||
Sbjct: 1671 gcgtcacacaagacagagagctcataagctttcttgagtaaaccattgcgtcgtttgcag 1612
Query: 1043 aaggtgacctgccggctcgtgttgttctcgatcctcttgatctc 1086
|| ||||| || || |||| ||||||| |||||||| |||||
Sbjct: 1611 aaagtgacttgacgattcgtagtgttctctatcctctttatctc 1568
>gb|AY727658.1| Arabidopsis thaliana ecotype PHW-1 SHATTERPROOF2 (SHP2) gene,
complete cds
Length = 4803
Score = 63.9 bits (32), Expect = 6e-008
Identities = 131/164 (79%)
Strand = Plus / Minus
Query: 923 ctgttgttggcatactcgtagaggcgaccacggctagagaagacgatgagggccacctca 982
||||||||||| ||||||||||| || || || | ||||||| || || || ||||||
Sbjct: 1731 ctgttgttggcgtactcgtagagacggcctcgagtggagaagatgacaagagcaacctca 1672
Query: 983 gcgtcgcagaggacggagagctcgtacgccttcttgaggagcccattgcggcgcttgcag 1042
||||| || | ||| |||||||| || || |||||||| | |||||||| || ||||||
Sbjct: 1671 gcgtcacacaagacagagagctcataagctttcttgagtaaaccattgcgtcgtttgcag 1612
Query: 1043 aaggtgacctgccggctcgtgttgttctcgatcctcttgatctc 1086
|| ||||| || || |||| ||||||| |||||||| |||||
Sbjct: 1611 aaagtgacttgacgattcgtagtgttctctatcctctttatctc 1568
>gb|AY727659.1| Arabidopsis thaliana ecotype PHW-33 SHATTERPROOF2 (SHP2) gene,
complete cds
Length = 4803
Score = 63.9 bits (32), Expect = 6e-008
Identities = 131/164 (79%)
Strand = Plus / Minus
Query: 923 ctgttgttggcatactcgtagaggcgaccacggctagagaagacgatgagggccacctca 982
||||||||||| ||||||||||| || || || | ||||||| || || || ||||||
Sbjct: 1731 ctgttgttggcgtactcgtagagacggcctcgagtggagaagatgacaagagcaacctca 1672
Query: 983 gcgtcgcagaggacggagagctcgtacgccttcttgaggagcccattgcggcgcttgcag 1042
||||| || | ||| |||||||| || || |||||||| | |||||||| || ||||||
Sbjct: 1671 gcgtcacacaagacagagagctcataagctttcttgagtaaaccattgcgtcgtttgcag 1612
Query: 1043 aaggtgacctgccggctcgtgttgttctcgatcctcttgatctc 1086
|| ||||| || || |||| ||||||| |||||||| |||||
Sbjct: 1611 aaagtgacttgacgattcgtagtgttctctatcctctttatctc 1568
>gb|AY727660.1| Arabidopsis thaliana ecotype Kondara SHATTERPROOF2 (SHP2) gene,
complete cds
Length = 4805
Score = 63.9 bits (32), Expect = 6e-008
Identities = 131/164 (79%)
Strand = Plus / Minus
Query: 923 ctgttgttggcatactcgtagaggcgaccacggctagagaagacgatgagggccacctca 982
||||||||||| ||||||||||| || || || | ||||||| || || || ||||||
Sbjct: 1731 ctgttgttggcgtactcgtagagacggcctcgagtggagaagatgacaagagcaacctca 1672
Query: 983 gcgtcgcagaggacggagagctcgtacgccttcttgaggagcccattgcggcgcttgcag 1042
||||| || | ||| |||||||| || || |||||||| | |||||||| || ||||||
Sbjct: 1671 gcgtcacacaagacagagagctcataagctttcttgagtaaaccattgcgtcgtttgcag 1612
Query: 1043 aaggtgacctgccggctcgtgttgttctcgatcctcttgatctc 1086
|| ||||| || || |||| ||||||| |||||||| |||||
Sbjct: 1611 aaagtgacttgacgattcgtagtgttctctatcctctttatctc 1568
>gb|AY727661.1| Arabidopsis thaliana ecotype An-2 SHATTERPROOF2 (SHP2) gene, complete
cds
Length = 4803
Score = 63.9 bits (32), Expect = 6e-008
Identities = 131/164 (79%)
Strand = Plus / Minus
Query: 923 ctgttgttggcatactcgtagaggcgaccacggctagagaagacgatgagggccacctca 982
||||||||||| ||||||||||| || || || | ||||||| || || || ||||||
Sbjct: 1731 ctgttgttggcgtactcgtagagacggcctcgagtggagaagatgacaagagcaacctca 1672
Query: 983 gcgtcgcagaggacggagagctcgtacgccttcttgaggagcccattgcggcgcttgcag 1042
||||| || | ||| |||||||| || || |||||||| | |||||||| || ||||||
Sbjct: 1671 gcgtcacacaagacagagagctcataagctttcttgagtaaaccattgcgtcgtttgcag 1612
Query: 1043 aaggtgacctgccggctcgtgttgttctcgatcctcttgatctc 1086
|| ||||| || || |||| ||||||| |||||||| |||||
Sbjct: 1611 aaagtgacttgacgattcgtagtgttctctatcctctttatctc 1568
>gb|AY727662.1| Arabidopsis thaliana ecotype Br-0 SHATTERPROOF2 (SHP2) gene, complete
cds
Length = 4834
Score = 63.9 bits (32), Expect = 6e-008
Identities = 131/164 (79%)
Strand = Plus / Minus
Query: 923 ctgttgttggcatactcgtagaggcgaccacggctagagaagacgatgagggccacctca 982
||||||||||| ||||||||||| || || || | ||||||| || || || ||||||
Sbjct: 1730 ctgttgttggcgtactcgtagagacggcctcgagtggagaagatgacaagagcaacctca 1671
Query: 983 gcgtcgcagaggacggagagctcgtacgccttcttgaggagcccattgcggcgcttgcag 1042
||||| || | ||| |||||||| || || |||||||| | |||||||| || ||||||
Sbjct: 1670 gcgtcacacaagacagagagctcataagctttcttgagtaaaccattgcgtcgtttgcag 1611
Query: 1043 aaggtgacctgccggctcgtgttgttctcgatcctcttgatctc 1086
|| ||||| || || |||| ||||||| |||||||| |||||
Sbjct: 1610 aaagtgacttgacgattcgtagtgttctctatcctctttatctc 1567
>gb|AY727663.1| Arabidopsis thaliana ecotype Cha-0 SHATTERPROOF2 (SHP2) gene,
complete cds
Length = 4814
Score = 63.9 bits (32), Expect = 6e-008
Identities = 131/164 (79%)
Strand = Plus / Minus
Query: 923 ctgttgttggcatactcgtagaggcgaccacggctagagaagacgatgagggccacctca 982
||||||||||| ||||||||||| || || || | ||||||| || || || ||||||
Sbjct: 1730 ctgttgttggcgtactcgtagagacggcctcgagtggagaagatgacaagagcaacctca 1671
Query: 983 gcgtcgcagaggacggagagctcgtacgccttcttgaggagcccattgcggcgcttgcag 1042
||||| || | ||| |||||||| || || |||||||| | |||||||| || ||||||
Sbjct: 1670 gcgtcacacaagacagagagctcataagctttcttgagtaaaccattgcgtcgtttgcag 1611
Query: 1043 aaggtgacctgccggctcgtgttgttctcgatcctcttgatctc 1086
|| ||||| || || |||| ||||||| |||||||| |||||
Sbjct: 1610 aaagtgacttgacgattcgtagtgttctctatcctctttatctc 1567
>gb|AY727664.1| Arabidopsis thaliana ecotype Di-0 SHATTERPROOF2 (SHP2) gene, complete
cds
Length = 4829
Score = 63.9 bits (32), Expect = 6e-008
Identities = 131/164 (79%)
Strand = Plus / Minus
Query: 923 ctgttgttggcatactcgtagaggcgaccacggctagagaagacgatgagggccacctca 982
||||||||||| ||||||||||| || || || | ||||||| || || || ||||||
Sbjct: 1731 ctgttgttggcgtactcgtagagacggcctcgagtggagaagatgacaagagcaacctca 1672
Query: 983 gcgtcgcagaggacggagagctcgtacgccttcttgaggagcccattgcggcgcttgcag 1042
||||| || | ||| |||||||| || || |||||||| | |||||||| || ||||||
Sbjct: 1671 gcgtcacacaagacagagagctcataagctttcttgagtaaaccattgcgtcgtttgcag 1612
Query: 1043 aaggtgacctgccggctcgtgttgttctcgatcctcttgatctc 1086
|| ||||| || || |||| ||||||| |||||||| |||||
Sbjct: 1611 aaagtgacttgacgattcgtagtgttctctatcctctttatctc 1568
>gb|AY727665.1| Arabidopsis thaliana ecotype Est-1 SHATTERPROOF2 (SHP2) gene,
complete cds
Length = 4749
Score = 63.9 bits (32), Expect = 6e-008
Identities = 131/164 (79%)
Strand = Plus / Minus
Query: 923 ctgttgttggcatactcgtagaggcgaccacggctagagaagacgatgagggccacctca 982
||||||||||| ||||||||||| || || || | ||||||| || || || ||||||
Sbjct: 1731 ctgttgttggcgtactcgtagagacggcctcgagtggagaagatgacaagagcaacctca 1672
Query: 983 gcgtcgcagaggacggagagctcgtacgccttcttgaggagcccattgcggcgcttgcag 1042
||||| || | ||| |||||||| || || |||||||| | |||||||| || ||||||
Sbjct: 1671 gcgtcacacaagacagagagctcataagctttcttgagtaaaccattgcgtcgtttgcag 1612
Query: 1043 aaggtgacctgccggctcgtgttgttctcgatcctcttgatctc 1086
|| ||||| || || |||| ||||||| |||||||| |||||
Sbjct: 1611 aaagtgacttgacgattcgtagtgttctctatcctctttatctc 1568
>gb|AY727666.1| Arabidopsis thaliana ecotype Kl-5 SHATTERPROOF2 (SHP2) gene, complete
cds
Length = 4805
Score = 63.9 bits (32), Expect = 6e-008
Identities = 131/164 (79%)
Strand = Plus / Minus
Query: 923 ctgttgttggcatactcgtagaggcgaccacggctagagaagacgatgagggccacctca 982
||||||||||| ||||||||||| || || || | ||||||| || || || ||||||
Sbjct: 1731 ctgttgttggcgtactcgtagagacggcctcgagtggagaagatgacaagagcaacctca 1672
Query: 983 gcgtcgcagaggacggagagctcgtacgccttcttgaggagcccattgcggcgcttgcag 1042
||||| || | ||| |||||||| || || |||||||| | |||||||| || ||||||
Sbjct: 1671 gcgtcacacaagacagagagctcataagctttcttgagtaaaccattgcgtcgtttgcag 1612
Query: 1043 aaggtgacctgccggctcgtgttgttctcgatcctcttgatctc 1086
|| ||||| || || |||| ||||||| |||||||| |||||
Sbjct: 1611 aaagtgacttgacgattcgtagtgttctctatcctctttatctc 1568
>gb|AY727667.1| Arabidopsis thaliana ecotype Ko-2 SHATTERPROOF2 (SHP2) gene, complete
cds
Length = 4803
Score = 63.9 bits (32), Expect = 6e-008
Identities = 131/164 (79%)
Strand = Plus / Minus
Query: 923 ctgttgttggcatactcgtagaggcgaccacggctagagaagacgatgagggccacctca 982
||||||||||| ||||||||||| || || || | ||||||| || || || ||||||
Sbjct: 1731 ctgttgttggcgtactcgtagagacggcctcgagtggagaagatgacaagagcaacctca 1672
Query: 983 gcgtcgcagaggacggagagctcgtacgccttcttgaggagcccattgcggcgcttgcag 1042
||||| || | ||| |||||||| || || |||||||| | |||||||| || ||||||
Sbjct: 1671 gcgtcacacaagacagagagctcataagctttcttgagtaaaccattgcgtcgtttgcag 1612
Query: 1043 aaggtgacctgccggctcgtgttgttctcgatcctcttgatctc 1086
|| ||||| || || |||| ||||||| |||||||| |||||
Sbjct: 1611 aaagtgacttgacgattcgtagtgttctctatcctctttatctc 1568
>gb|AY727668.1| Arabidopsis thaliana ecotype Lip-0 SHATTERPROOF2 (SHP2) gene,
complete cds
Length = 4838
Score = 63.9 bits (32), Expect = 6e-008
Identities = 131/164 (79%)
Strand = Plus / Minus
Query: 923 ctgttgttggcatactcgtagaggcgaccacggctagagaagacgatgagggccacctca 982
||||||||||| ||||||||||| || || || | ||||||| || || || ||||||
Sbjct: 1731 ctgttgttggcgtactcgtagagacggcctcgagtggagaagatgacaagagcaacctca 1672
Query: 983 gcgtcgcagaggacggagagctcgtacgccttcttgaggagcccattgcggcgcttgcag 1042
||||| || | ||| |||||||| || || |||||||| | |||||||| || ||||||
Sbjct: 1671 gcgtcacacaagacagagagctcataagctttcttgagtaaaccattgcgtcgtttgcag 1612
Query: 1043 aaggtgacctgccggctcgtgttgttctcgatcctcttgatctc 1086
|| ||||| || || |||| ||||||| |||||||| |||||
Sbjct: 1611 aaagtgacttgacgattcgtagtgttctctatcctctttatctc 1568
>gb|AY727669.1| Arabidopsis thaliana ecotype 9481B SHATTERPROOF2 (SHP2) gene,
complete cds
Length = 4834
Score = 63.9 bits (32), Expect = 6e-008
Identities = 131/164 (79%)
Strand = Plus / Minus
Query: 923 ctgttgttggcatactcgtagaggcgaccacggctagagaagacgatgagggccacctca 982
||||||||||| ||||||||||| || || || | ||||||| || || || ||||||
Sbjct: 1733 ctgttgttggcgtactcgtagagacggcctcgagtggagaagatgacaagagcaacctca 1674
Query: 983 gcgtcgcagaggacggagagctcgtacgccttcttgaggagcccattgcggcgcttgcag 1042
||||| || | ||| |||||||| || || |||||||| | |||||||| || ||||||
Sbjct: 1673 gcgtcacacaagacagagagctcataagctttcttgagtaaaccattgcgtcgtttgcag 1614
Query: 1043 aaggtgacctgccggctcgtgttgttctcgatcctcttgatctc 1086
|| ||||| || || |||| ||||||| |||||||| |||||
Sbjct: 1613 aaagtgacttgacgattcgtagtgttctctatcctctttatctc 1570
>ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complete sequence
Length = 19705359
Score = 63.9 bits (32), Expect = 6e-008
Identities = 131/164 (79%)
Strand = Plus / Minus
Query: 923 ctgttgttggcatactcgtagaggcgaccacggctagagaagacgatgagggccacctca 982
||||||||||| ||||||||||| || || || | ||||||| || || || ||||||
Sbjct: 17827905 ctgttgttggcgtactcgtagagacggcctcgagtggagaagatgacaagagcaacctca 17827846
Query: 983 gcgtcgcagaggacggagagctcgtacgccttcttgaggagcccattgcggcgcttgcag 1042
||||| || | ||| |||||||| || || |||||||| | |||||||| || ||||||
Sbjct: 17827845 gcgtcacacaagacagagagctcataagctttcttgagtaaaccattgcgtcgtttgcag 17827786
Query: 1043 aaggtgacctgccggctcgtgttgttctcgatcctcttgatctc 1086
|| ||||| || || |||| ||||||| |||||||| |||||
Sbjct: 17827785 aaagtgacttgacgattcgtagtgttctctatcctctttatctc 17827742
Score = 42.1 bits (21), Expect = 0.22
Identities = 39/45 (86%)
Strand = Plus / Minus
Query: 958 agagaagacgatgagggccacctcagcgtcgcagaggacggagag 1002
|||||||| |||||| || || || ||||||||||| ||||||||
Sbjct: 9587643 agagaagatgatgagagcgacatcggcgtcgcagagaacggagag 9587599
>gb|M55550.1|ATHAGL1A Arabidopsis thaliana transcription factor (AGL1), complete cds
Length = 895
Score = 56.0 bits (28), Expect = 1e-005
Identities = 121/152 (79%)
Strand = Plus / Minus
Query: 893 ttcttgtacctctcaacagtagccttgacactgttgttggcatactcgtagaggcgacca 952
||||||||||| |||| ||| || | |||||||||||||| ||||| ||||| || |||
Sbjct: 263 ttcttgtacctttcaattgtacccctcacactgttgttggcgtactcatagagacggcca 204
Query: 953 cggctagagaagacgatgagggccacctcagcgtcgcagaggacggagagctcgtacgcc 1012
|| | ||||||| || |||||| || || || || || | ||| ||||| || || ||
Sbjct: 203 cgagtggagaagatgacgagggcaacttcggcatcacacaagacagagagttcataagct 144
Query: 1013 ttcttgaggagcccattgcggcgcttgcagaa 1044
|||||||| || |||||||| || ||||||||
Sbjct: 143 ttcttgagaagaccattgcgtcgtttgcagaa 112
>gb|AY086196.1| Arabidopsis thaliana clone 22339 mRNA, complete sequence
Length = 1202
Score = 56.0 bits (28), Expect = 1e-005
Identities = 121/152 (79%)
Strand = Plus / Minus
Query: 893 ttcttgtacctctcaacagtagccttgacactgttgttggcatactcgtagaggcgacca 952
||||||||||| |||| ||| || | |||||||||||||| ||||| ||||| || |||
Sbjct: 578 ttcttgtacctttcaattgtacccctcacactgttgttggcgtactcatagagacggcca 519
Query: 953 cggctagagaagacgatgagggccacctcagcgtcgcagaggacggagagctcgtacgcc 1012
|| | ||||||| || |||||| || || || || || | ||| ||||| || || ||
Sbjct: 518 cgagtggagaagatgacgagggcaacttcggcatcacacaagacagagagttcataagct 459
Query: 1013 ttcttgaggagcccattgcggcgcttgcagaa 1044
|||||||| || |||||||| || ||||||||
Sbjct: 458 ttcttgagaagaccattgcgtcgtttgcagaa 427
>ref|NM_115740.2| Arabidopsis thaliana SHP1 (SHATTERPROOF 1); DNA binding /
transcription factor AT3G58780 (SHP1) mRNA, complete cds
Length = 1209
Score = 56.0 bits (28), Expect = 1e-005
Identities = 121/152 (79%)
Strand = Plus / Minus
Query: 893 ttcttgtacctctcaacagtagccttgacactgttgttggcatactcgtagaggcgacca 952
||||||||||| |||| ||| || | |||||||||||||| ||||| ||||| || |||
Sbjct: 578 ttcttgtacctttcaattgtacccctcacactgttgttggcgtactcatagagacggcca 519
Query: 953 cggctagagaagacgatgagggccacctcagcgtcgcagaggacggagagctcgtacgcc 1012
|| | ||||||| || |||||| || || || || || | ||| ||||| || || ||
Sbjct: 518 cgagtggagaagatgacgagggcaacttcggcatcacacaagacagagagttcataagct 459
Query: 1013 ttcttgaggagcccattgcggcgcttgcagaa 1044
|||||||| || |||||||| || ||||||||
Sbjct: 458 ttcttgagaagaccattgcgtcgtttgcagaa 427
>emb|BX323641.1| Arabidopsis thaliana transposon insertion STS SM_3.37226, sequence
tagged site
Length = 342
Score = 52.0 bits (26), Expect = 2e-004
Identities = 89/110 (80%)
Strand = Plus / Plus
Query: 977 acctcagcgtcgcagaggacggagagctcgtacgccttcttgaggagcccattgcggcgc 1036
||||||||||| || | ||| |||||||| || || |||||||| | |||||||| ||
Sbjct: 20 acctcagcgtcacacaagacagagagctcataagctttcttgagtaaaccattgcgtcgt 79
Query: 1037 ttgcagaaggtgacctgccggctcgtgttgttctcgatcctcttgatctc 1086
|||||||| ||||| || || |||| ||||||| |||||||| |||||
Sbjct: 80 ttgcagaaagtgacttgacgattcgtagtgttctctatcctctttatctc 129
>emb|BX323649.1| Arabidopsis thaliana transposon insertion STS SM_3.37219, sequence
tagged site
Length = 429
Score = 52.0 bits (26), Expect = 2e-004
Identities = 89/110 (80%)
Strand = Plus / Plus
Query: 977 acctcagcgtcgcagaggacggagagctcgtacgccttcttgaggagcccattgcggcgc 1036
||||||||||| || | ||| |||||||| || || |||||||| | |||||||| ||
Sbjct: 20 acctcagcgtcacacaagacagagagctcataagctttcttgagtaaaccattgcgtcgt 79
Query: 1037 ttgcagaaggtgacctgccggctcgtgttgttctcgatcctcttgatctc 1086
|||||||| ||||| || || |||| ||||||| |||||||| |||||
Sbjct: 80 ttgcagaaagtgacttgacgattcgtagtgttctctatcctctttatctc 129
>emb|BX323659.1| Arabidopsis thaliana transposon insertion STS SM_3.37228, sequence
tagged site
Length = 420
Score = 52.0 bits (26), Expect = 2e-004
Identities = 89/110 (80%)
Strand = Plus / Plus
Query: 977 acctcagcgtcgcagaggacggagagctcgtacgccttcttgaggagcccattgcggcgc 1036
||||||||||| || | ||| |||||||| || || |||||||| | |||||||| ||
Sbjct: 20 acctcagcgtcacacaagacagagagctcataagctttcttgagtaaaccattgcgtcgt 79
Query: 1037 ttgcagaaggtgacctgccggctcgtgttgttctcgatcctcttgatctc 1086
|||||||| ||||| || || |||| ||||||| |||||||| |||||
Sbjct: 80 ttgcagaaagtgacttgacgattcgtagtgttctctatcctctttatctc 129
>emb|AL772917.1| Arabidopsis thaliana transposon insertion STS SM_3.467, sequence
tagged site
Length = 514
Score = 52.0 bits (26), Expect = 2e-004
Identities = 89/110 (80%)
Strand = Plus / Plus
Query: 977 acctcagcgtcgcagaggacggagagctcgtacgccttcttgaggagcccattgcggcgc 1036
||||||||||| || | ||| |||||||| || || |||||||| | |||||||| ||
Sbjct: 20 acctcagcgtcacacaagacagagagctcataagctttcttgagtaaaccattgcgtcgt 79
Query: 1037 ttgcagaaggtgacctgccggctcgtgttgttctcgatcctcttgatctc 1086
|||||||| ||||| || || |||| ||||||| |||||||| |||||
Sbjct: 80 ttgcagaaagtgacttgacgattcgtagtgttctctatcctctttatctc 129
>emb|AL772966.1| Arabidopsis thaliana transposon insertion STS SM_3.567, sequence
tagged site
Length = 498
Score = 52.0 bits (26), Expect = 2e-004
Identities = 89/110 (80%)
Strand = Plus / Plus
Query: 977 acctcagcgtcgcagaggacggagagctcgtacgccttcttgaggagcccattgcggcgc 1036
||||||||||| || | ||| |||||||| || || |||||||| | |||||||| ||
Sbjct: 20 acctcagcgtcacacaagacagagagctcataagctttcttgagtaaaccattgcgtcgt 79
Query: 1037 ttgcagaaggtgacctgccggctcgtgttgttctcgatcctcttgatctc 1086
|||||||| ||||| || || |||| ||||||| |||||||| |||||
Sbjct: 80 ttgcagaaagtgacttgacgattcgtagtgttctctatcctctttatctc 129
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 556,920
Number of Sequences: 1013581
Number of extensions: 556920
Number of successful extensions: 43507
Number of sequences better than 0.5: 158
Number of HSP's better than 0.5 without gapping: 161
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 41346
Number of HSP's gapped (non-prelim): 2129
length of query: 1221
length of database: 908,940,872
effective HSP length: 20
effective length of query: 1201
effective length of database: 888,669,252
effective search space: 1067291771652
effective search space used: 1067291771652
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)