BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 7297169.2.1
(545 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|H36083.1|H36083 14605 Lambda-PRL2 Arabidopsis thaliana c... 54 3e-005
gb|T45332.1|T45332 8595 Lambda-PRL2 Arabidopsis thaliana cD... 52 1e-004
gb|R29881.1|R29881 12486 Lambda-PRL2 Arabidopsis thaliana c... 52 1e-004
gb|AI994559.1|AI994559 701498584 A. thaliana, Ohio State cl... 52 1e-004
gb|BE523808.1|BE523808 M41H3STM Arabidopsis developing seed... 52 1e-004
gb|BE525885.1|BE525885 M63H07STM Arabidopsis developing see... 52 1e-004
gb|AV527216.1|AV527216 AV527216 Arabidopsis thaliana aboveg... 52 1e-004
gb|AV550344.1|AV550344 AV550344 Arabidopsis thaliana roots ... 52 1e-004
gb|AV552340.1|AV552340 AV552340 Arabidopsis thaliana roots ... 52 1e-004
gb|AV556662.1|AV556662 AV556662 Arabidopsis thaliana green ... 52 1e-004
gb|AV564442.1|AV564442 AV564442 Arabidopsis thaliana green ... 52 1e-004
gb|Z47391.1|Z47391 ATTS4413 Perp-dry-seedA Arabidopsis thal... 52 1e-004
gb|AF065639.1|AF065639 Arabidopsis thaliana cucumisin-like ... 52 1e-004
gb|AY091773.1| Arabidopsis thaliana AT5g67360/K8K14_8 mRNA,... 52 1e-004
gb|AF360285.1| Arabidopsis thaliana putative subtilisin ser... 52 1e-004
gb|AY142612.1| Arabidopsis thaliana putative subtilisin ser... 52 1e-004
gb|BT001082.1| Arabidopsis thaliana At5g67360/K8K14_8 mRNA,... 52 1e-004
emb|BX831789.1|CNS0A284 Arabidopsis thaliana Full-length cD... 52 1e-004
dbj|AB007645.1| Arabidopsis thaliana genomic DNA, chromosom... 52 1e-004
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 52 1e-004
emb|X85974.1|ATARA12 A.thaliana mRNA for subtilisin-like pr... 52 1e-004
ref|NM_126136.2| Arabidopsis thaliana ARA12; subtilase AT5G... 52 1e-004
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 52 1e-004
emb|BX534646.1| Arabidopsis thaliana T-DNA flanking sequenc... 50 4e-004
emb|BX534647.1| Arabidopsis thaliana T-DNA flanking sequenc... 50 4e-004
gb|BX835871.1|BX835871 BX835871 Arabidopsis thaliana Hormon... 50 4e-004
emb|BX842380.1|CNS0A4W3 Arabidopsis thaliana Full-length cD... 50 4e-004
dbj|AP000600.1| Arabidopsis thaliana genomic DNA, chromosom... 50 4e-004
gb|BT011692.1| Arabidopsis thaliana At3g14067 gene, complet... 50 4e-004
gb|BT012275.1| Arabidopsis thaliana At3g14067 gene, complet... 50 4e-004
emb|CQ805066.1| Sequence 1477 from Patent WO2004035798 50 4e-004
ref|NM_112261.2| Arabidopsis thaliana peptidase/ subtilase ... 50 4e-004
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 50 4e-004
gb|BE529392.1|BE529392 M74I18STM Arabidopsis developing see... 48 0.002
>gb|H36083.1|H36083 14605 Lambda-PRL2 Arabidopsis thaliana cDNA clone 173J17T7, mRNA
sequence
Length = 410
Score = 54.0 bits (27), Expect = 3e-005
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 283 ttcaacatcatctccggcacgtccatgtcctgcccgcacgtgagcggcctcgccgcgctg 342
||||||||||||||||| || || ||||| ||||| ||||| || | ||||||||| ||
Sbjct: 225 ttcaacatcatctccggtacatcgatgtcgtgcccacacgttagngacctcgccgctctn 284
Query: 343 ctccg 347
|||||
Sbjct: 285 ctccg 289
>gb|T45332.1|T45332 8595 Lambda-PRL2 Arabidopsis thaliana cDNA clone 71C11T7, mRNA
sequence
Length = 519
Score = 52.0 bits (26), Expect = 1e-004
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 274 cgcgtggagttcaacatcatctccggcacgtccatgtcctgcccgcacgt 323
|||||||||||||| |||||||| || ||||| ||||| ||||| |||||
Sbjct: 180 cgcgtggagttcaatatcatctctgggacgtcgatgtcttgccctcacgt 229
>gb|R29881.1|R29881 12486 Lambda-PRL2 Arabidopsis thaliana cDNA clone 162I10T7, mRNA
sequence
Length = 525
Score = 52.0 bits (26), Expect = 1e-004
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 274 cgcgtggagttcaacatcatctccggcacgtccatgtcctgcccgcacgt 323
|||||||||||||| |||||||| || ||||| ||||| ||||| |||||
Sbjct: 229 cgcgtggagttcaatatcatctctgggacgtcgatgtcttgccctcacgt 278
>gb|AI994559.1|AI994559 701498584 A. thaliana, Ohio State clone set Arabidopsis thaliana
cDNA clone 701498584, mRNA sequence
Length = 537
Score = 52.0 bits (26), Expect = 1e-004
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 274 cgcgtggagttcaacatcatctccggcacgtccatgtcctgcccgcacgt 323
|||||||||||||| |||||||| || ||||| ||||| ||||| |||||
Sbjct: 229 cgcgtggagttcaatatcatctctgggacgtcgatgtcttgccctcacgt 278
>gb|BE523808.1|BE523808 M41H3STM Arabidopsis developing seed Arabidopsis thaliana cDNA
clone M41H3 5', mRNA sequence
Length = 264
Score = 52.0 bits (26), Expect = 1e-004
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 274 cgcgtggagttcaacatcatctccggcacgtccatgtcctgcccgcacgt 323
|||||||||||||| |||||||| || ||||| ||||| ||||| |||||
Sbjct: 172 cgcgtggagttcaatatcatctctgggacgtcgatgtcttgccctcacgt 221
>gb|BE525885.1|BE525885 M63H07STM Arabidopsis developing seed Arabidopsis thaliana cDNA
clone 600034428R1 5', mRNA sequence
Length = 264
Score = 52.0 bits (26), Expect = 1e-004
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 274 cgcgtggagttcaacatcatctccggcacgtccatgtcctgcccgcacgt 323
|||||||||||||| |||||||| || ||||| ||||| ||||| |||||
Sbjct: 152 cgcgtggagttcaatatcatctctgggacgtcgatgtcttgccctcacgt 201
>gb|AV527216.1|AV527216 AV527216 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APZ31g05R 5', mRNA
sequence
Length = 526
Score = 52.0 bits (26), Expect = 1e-004
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 274 cgcgtggagttcaacatcatctccggcacgtccatgtcctgcccgcacgt 323
|||||||||||||| |||||||| || ||||| ||||| ||||| |||||
Sbjct: 399 cgcgtggagttcaatatcatctctgggacgtcgatgtcttgccctcacgt 448
>gb|AV550344.1|AV550344 AV550344 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ111b03R 5', mRNA sequence
Length = 583
Score = 52.0 bits (26), Expect = 1e-004
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 274 cgcgtggagttcaacatcatctccggcacgtccatgtcctgcccgcacgt 323
|||||||||||||| |||||||| || ||||| ||||| ||||| |||||
Sbjct: 179 cgcgtggagttcaatatcatctctgggacgtcgatgtcttgccctcacgt 228
>gb|AV552340.1|AV552340 AV552340 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ27c05R 5', mRNA sequence
Length = 518
Score = 52.0 bits (26), Expect = 1e-004
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 274 cgcgtggagttcaacatcatctccggcacgtccatgtcctgcccgcacgt 323
|||||||||||||| |||||||| || ||||| ||||| ||||| |||||
Sbjct: 362 cgcgtggagttcaatatcatctctgggacgtcgatgtcttgccctcacgt 411
>gb|AV556662.1|AV556662 AV556662 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ049c08F 3', mRNA sequence
Length = 560
Score = 52.0 bits (26), Expect = 1e-004
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 274 cgcgtggagttcaacatcatctccggcacgtccatgtcctgcccgcacgt 323
|||||||||||||| |||||||| || ||||| ||||| ||||| |||||
Sbjct: 272 cgcgtggagttcaatatcatctctgggacgtcgatgtcttgccctcacgt 223
>gb|AV564442.1|AV564442 AV564442 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ204e08F 3', mRNA sequence
Length = 544
Score = 52.0 bits (26), Expect = 1e-004
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 274 cgcgtggagttcaacatcatctccggcacgtccatgtcctgcccgcacgt 323
|||||||||||||| |||||||| || ||||| ||||| ||||| |||||
Sbjct: 176 cgcgtggagttcaatatcatctctgggacgtcgatgtcttgccctcacgt 225
>gb|Z47391.1|Z47391 ATTS4413 Perp-dry-seedA Arabidopsis thaliana cDNA clone PAP804,
mRNA sequence
Length = 400
Score = 52.0 bits (26), Expect = 1e-004
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 274 cgcgtggagttcaacatcatctccggcacgtccatgtcctgcccgcacgt 323
|||||||||||||| |||||||| || ||||| ||||| ||||| |||||
Sbjct: 121 cgcgtggagttcaatatcatctctgggacgtcgatgtcttgccctcacgt 170
>gb|AF065639.1|AF065639 Arabidopsis thaliana cucumisin-like serine protease (ARA12) gene,
complete cds
Length = 2686
Score = 52.0 bits (26), Expect = 1e-004
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 274 cgcgtggagttcaacatcatctccggcacgtccatgtcctgcccgcacgt 323
|||||||||||||| |||||||| || ||||| ||||| ||||| |||||
Sbjct: 1883 cgcgtggagttcaatatcatctctgggacgtcgatgtcttgccctcacgt 1932
>gb|AY091773.1| Arabidopsis thaliana AT5g67360/K8K14_8 mRNA, complete cds
Length = 2520
Score = 52.0 bits (26), Expect = 1e-004
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 274 cgcgtggagttcaacatcatctccggcacgtccatgtcctgcccgcacgt 323
|||||||||||||| |||||||| || ||||| ||||| ||||| |||||
Sbjct: 1625 cgcgtggagttcaatatcatctctgggacgtcgatgtcttgccctcacgt 1674
>gb|AF360285.1| Arabidopsis thaliana putative subtilisin serine protease ARA12
(At5g67360) mRNA, complete cds
Length = 2618
Score = 52.0 bits (26), Expect = 1e-004
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 274 cgcgtggagttcaacatcatctccggcacgtccatgtcctgcccgcacgt 323
|||||||||||||| |||||||| || ||||| ||||| ||||| |||||
Sbjct: 1708 cgcgtggagttcaatatcatctctgggacgtcgatgtcttgccctcacgt 1757
>gb|AY142612.1| Arabidopsis thaliana putative subtilisin serine protease ARA12
(At5g67360) mRNA, complete cds
Length = 2305
Score = 52.0 bits (26), Expect = 1e-004
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 274 cgcgtggagttcaacatcatctccggcacgtccatgtcctgcccgcacgt 323
|||||||||||||| |||||||| || ||||| ||||| ||||| |||||
Sbjct: 1594 cgcgtggagttcaatatcatctctgggacgtcgatgtcttgccctcacgt 1643
>gb|BT001082.1| Arabidopsis thaliana At5g67360/K8K14_8 mRNA, complete cds
Length = 2274
Score = 52.0 bits (26), Expect = 1e-004
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 274 cgcgtggagttcaacatcatctccggcacgtccatgtcctgcccgcacgt 323
|||||||||||||| |||||||| || ||||| ||||| ||||| |||||
Sbjct: 1594 cgcgtggagttcaatatcatctctgggacgtcgatgtcttgccctcacgt 1643
>emb|BX831789.1|CNS0A284 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH29ZH12 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 2500
Score = 52.0 bits (26), Expect = 1e-004
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 274 cgcgtggagttcaacatcatctccggcacgtccatgtcctgcccgcacgt 323
|||||||||||||| |||||||| || ||||| ||||| ||||| |||||
Sbjct: 1618 cgcgtggagttcaatatcatctctgggacgtcgatgtcttgccctcacgt 1667
>dbj|AB007645.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K8K14
Length = 72698
Score = 52.0 bits (26), Expect = 1e-004
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 274 cgcgtggagttcaacatcatctccggcacgtccatgtcctgcccgcacgt 323
|||||||||||||| |||||||| || ||||| ||||| ||||| |||||
Sbjct: 24736 cgcgtggagttcaatatcatctctgggacgtcgatgtcttgccctcacgt 24687
>dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, complete sequence
Length = 23810767
Score = 52.0 bits (26), Expect = 1e-004
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 274 cgcgtggagttcaacatcatctccggcacgtccatgtcctgcccgcacgt 323
|||||||||||||| |||||||| || ||||| ||||| ||||| |||||
Sbjct: 23720945 cgcgtggagttcaatatcatctctgggacgtcgatgtcttgccctcacgt 23720896
>emb|X85974.1|ATARA12 A.thaliana mRNA for subtilisin-like protein
Length = 2423
Score = 52.0 bits (26), Expect = 1e-004
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 274 cgcgtggagttcaacatcatctccggcacgtccatgtcctgcccgcacgt 323
|||||||||||||| |||||||| || ||||| ||||| ||||| |||||
Sbjct: 1562 cgcgtggagttcaatatcatctctgggacgtcgatgtcttgccctcacgt 1611
>ref|NM_126136.2| Arabidopsis thaliana ARA12; subtilase AT5G67360 (ARA12) mRNA,
complete cds
Length = 2689
Score = 52.0 bits (26), Expect = 1e-004
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 274 cgcgtggagttcaacatcatctccggcacgtccatgtcctgcccgcacgt 323
|||||||||||||| |||||||| || ||||| ||||| ||||| |||||
Sbjct: 1708 cgcgtggagttcaatatcatctctgggacgtcgatgtcttgccctcacgt 1757
>ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complete sequence
Length = 26992728
Score = 52.0 bits (26), Expect = 1e-004
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 274 cgcgtggagttcaacatcatctccggcacgtccatgtcctgcccgcacgt 323
|||||||||||||| |||||||| || ||||| ||||| ||||| |||||
Sbjct: 26890098 cgcgtggagttcaatatcatctctgggacgtcgatgtcttgccctcacgt 26890049
>emb|BX534646.1| Arabidopsis thaliana T-DNA flanking sequence GK-511A11-019921,
genomic survey sequence
Length = 422
Score = 50.1 bits (25), Expect = 4e-004
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 283 ttcaacatcatctccggcacgtccatgtcctgcccgcacgtgagcggcctcgccgcgctg 342
||||||||||||||||| || || ||||| ||||| ||||| || || |||||||| ||
Sbjct: 106 ttcaacatcatctccggtacatcgatgtcgtgcccacacgttagtggactcgccgctctc 165
Query: 343 ctccg 347
|||||
Sbjct: 166 ctccg 170
>emb|BX534647.1| Arabidopsis thaliana T-DNA flanking sequence GK-511A11-019928,
genomic survey sequence
Length = 421
Score = 50.1 bits (25), Expect = 4e-004
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 283 ttcaacatcatctccggcacgtccatgtcctgcccgcacgtgagcggcctcgccgcgctg 342
||||||||||||||||| || || ||||| ||||| ||||| || || |||||||| ||
Sbjct: 105 ttcaacatcatctccggtacatcgatgtcgtgcccacacgttagtggactcgccgctctc 164
Query: 343 ctccg 347
|||||
Sbjct: 165 ctccg 169
>gb|BX835871.1|BX835871 BX835871 Arabidopsis thaliana Hormone Treated Callus Col-0
Arabidopsis thaliana cDNA clone GSLTPGH70ZB02 3PRIM,
mRNA sequence
Length = 1022
Score = 50.1 bits (25), Expect = 4e-004
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 283 ttcaacatcatctccggcacgtccatgtcctgcccgcacgtgagcggcctcgccgcgctg 342
||||||||||||||||| || || ||||| ||||| ||||| || || |||||||| ||
Sbjct: 901 ttcaacatcatctccggtacatcgatgtcgtgcccacacgttagtggactcgccgctctc 842
Query: 343 ctccg 347
|||||
Sbjct: 841 ctccg 837
>emb|BX842380.1|CNS0A4W3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH85ZE01 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 2472
Score = 50.1 bits (25), Expect = 4e-004
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 283 ttcaacatcatctccggcacgtccatgtcctgcccgcacgtgagcggcctcgccgcgctg 342
||||||||||||||||| || || ||||| ||||| ||||| || || |||||||| ||
Sbjct: 1620 ttcaacatcatctccggtacatcgatgtcgtgcccacacgttagtggactcgccgctctc 1679
Query: 343 ctccg 347
|||||
Sbjct: 1680 ctccg 1684
>dbj|AP000600.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MAG2
Length = 73859
Score = 50.1 bits (25), Expect = 4e-004
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 283 ttcaacatcatctccggcacgtccatgtcctgcccgcacgtgagcggcctcgccgcgctg 342
||||||||||||||||| || || ||||| ||||| ||||| || || |||||||| ||
Sbjct: 156 ttcaacatcatctccggtacatcgatgtcgtgcccacacgttagtggactcgccgctctc 97
Query: 343 ctccg 347
|||||
Sbjct: 96 ctccg 92
>gb|BT011692.1| Arabidopsis thaliana At3g14067 gene, complete cds
Length = 2503
Score = 50.1 bits (25), Expect = 4e-004
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 283 ttcaacatcatctccggcacgtccatgtcctgcccgcacgtgagcggcctcgccgcgctg 342
||||||||||||||||| || || ||||| ||||| ||||| || || |||||||| ||
Sbjct: 1643 ttcaacatcatctccggtacatcgatgtcgtgcccacacgttagtggactcgccgctctc 1702
Query: 343 ctccg 347
|||||
Sbjct: 1703 ctccg 1707
>gb|BT012275.1| Arabidopsis thaliana At3g14067 gene, complete cds
Length = 2334
Score = 50.1 bits (25), Expect = 4e-004
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 283 ttcaacatcatctccggcacgtccatgtcctgcccgcacgtgagcggcctcgccgcgctg 342
||||||||||||||||| || || ||||| ||||| ||||| || || |||||||| ||
Sbjct: 1615 ttcaacatcatctccggtacatcgatgtcgtgcccacacgttagtggactcgccgctctc 1674
Query: 343 ctccg 347
|||||
Sbjct: 1675 ctccg 1679
>emb|CQ805066.1| Sequence 1477 from Patent WO2004035798
Length = 2334
Score = 50.1 bits (25), Expect = 4e-004
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 283 ttcaacatcatctccggcacgtccatgtcctgcccgcacgtgagcggcctcgccgcgctg 342
||||||||||||||||| || || ||||| ||||| ||||| || || |||||||| ||
Sbjct: 1615 ttcaacatcatctccggtacatcgatgtcgtgcccacacgttagtggactcgccgctctc 1674
Query: 343 ctccg 347
|||||
Sbjct: 1675 ctccg 1679
>ref|NM_112261.2| Arabidopsis thaliana peptidase/ subtilase AT3G14067 mRNA, complete
cds
Length = 2334
Score = 50.1 bits (25), Expect = 4e-004
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 283 ttcaacatcatctccggcacgtccatgtcctgcccgcacgtgagcggcctcgccgcgctg 342
||||||||||||||||| || || ||||| ||||| ||||| || || |||||||| ||
Sbjct: 1615 ttcaacatcatctccggtacatcgatgtcgtgcccacacgttagtggactcgccgctctc 1674
Query: 343 ctccg 347
|||||
Sbjct: 1675 ctccg 1679
>ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complete sequence
Length = 23470805
Score = 50.1 bits (25), Expect = 4e-004
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 283 ttcaacatcatctccggcacgtccatgtcctgcccgcacgtgagcggcctcgccgcgctg 342
||||||||||||||||| || || ||||| ||||| ||||| || || |||||||| ||
Sbjct: 4659147 ttcaacatcatctccggtacatcgatgtcgtgcccacacgttagtggactcgccgctctc 4659088
Query: 343 ctccg 347
|||||
Sbjct: 4659087 ctccg 4659083
>gb|BE529392.1|BE529392 M74I18STM Arabidopsis developing seed Arabidopsis thaliana cDNA
clone 600038669R1 5', mRNA sequence
Length = 250
Score = 48.1 bits (24), Expect = 0.002
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 283 ttcaacatcatctccggcacgtccatgtcctgcccgcacgtgagcggcctcgccgc 338
||||||||||||||||| || || ||||| ||||| ||||| || || ||||||||
Sbjct: 192 ttcaacatcatctccggtacatcgatgtcgtgcccacacgttagtggactcgccgc 247
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 102,046
Number of Sequences: 1013581
Number of extensions: 102046
Number of successful extensions: 6464
Number of sequences better than 0.5: 34
Number of HSP's better than 0.5 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 6357
Number of HSP's gapped (non-prelim): 107
length of query: 545
length of database: 908,940,872
effective HSP length: 20
effective length of query: 525
effective length of database: 888,669,252
effective search space: 466551357300
effective search space used: 466551357300
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)