BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3748394.2.2
(3527 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AY078949.1| Arabidopsis thaliana At1g04920/F13M7_7 mRNA,... 100 3e-018
gb|BT002210.1| Arabidopsis thaliana At1g04920/F13M7_7 mRNA,... 100 3e-018
ref|NM_100370.2| Arabidopsis thaliana transferase, transfer... 100 3e-018
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 88 1e-014
gb|AC004809.1|F13M7 Arabidopsis thaliana chromosome 1 BAC F... 88 1e-014
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 88 1e-014
gb|AV828637.1|AV828637 AV828637 RAFL9 Arabidopsis thaliana ... 84 2e-013
gb|AY069868.1| Arabidopsis thaliana AT5g11110/T5K6_100 mRNA... 84 2e-013
gb|BT002697.1| Arabidopsis thaliana At5g11110/T5K6_100 gene... 84 2e-013
ref|NM_121149.3| Arabidopsis thaliana unknown protein AT5G1... 84 2e-013
dbj|AK175938.1| Arabidopsis thaliana mRNA for sucrose-phosp... 70 3e-009
dbj|AK220698.1| Arabidopsis thaliana mRNA for sucrose-phosp... 70 3e-009
dbj|AK220923.1| Arabidopsis thaliana mRNA for sucrose-phosp... 70 3e-009
dbj|AK221092.1| Arabidopsis thaliana mRNA for sucrose-phosp... 70 3e-009
ref|NM_001036532.1| Arabidopsis thaliana unknown protein AT... 70 3e-009
ref|NM_117080.4| Arabidopsis thaliana transferase, transfer... 70 3e-009
gb|B61821.1|B61821 T19E10TF TAMU Arabidopsis thaliana genom... 60 3e-006
gb|BP796512.1|BP796512 BP796512 RAFL5 Arabidopsis thaliana ... 60 3e-006
emb|CQ805456.1| Sequence 1867 from Patent WO2004035798 60 3e-006
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 60 3e-006
emb|AL360314.1|ATF2I11 Arabidopsis thaliana DNA chromosome ... 60 3e-006
emb|AL391222.1|ATT5K6 Arabidopsis thaliana DNA chromosome 5... 60 3e-006
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 60 3e-006
gb|AQ955203.1|AQ955203 LERAB94TF LERA Arabidopsis thaliana ... 58 1e-005
gb|BH213651.1|BH213651 SALK_009524 Arabidopsis thaliana TDN... 58 1e-005
gb|CB257846.1|CB257846 44-E011804-014-004-H12-T7R MPIZ-ADIS... 54 2e-004
gb|CB261138.1|CB261138 27-E9407-012-002-E16-t7r MPIZ-ADIS-0... 54 2e-004
gb|AF296825.1|F5O24 Arabidopsis thaliana BAC F5O24 54 2e-004
gb|AY039911.1| Arabidopsis thaliana putative sucrose-phosph... 54 2e-004
gb|AY079334.1| Arabidopsis thaliana putative sucrose-phosph... 54 2e-004
emb|CQ805578.1| Sequence 1989 from Patent WO2004035798 54 2e-004
ref|NM_122035.1| Arabidopsis thaliana transferase, transfer... 54 2e-004
gb|AV827809.1|AV827809 AV827809 RAFL9 Arabidopsis thaliana ... 52 7e-004
gb|AQ955204.1|AQ955204 LERAB94TR LERA Arabidopsis thaliana ... 50 0.003
gb|AV529117.1|AV529117 AV529117 Arabidopsis thaliana aboveg... 50 0.003
gb|CB185840.1|CB185840 EST01031 Arabidopsis virulent Pseudo... 48 0.011
gb|AV528430.1|AV528430 AV528430 Arabidopsis thaliana aboveg... 48 0.011
gb|CK121516.1|CK121516 202n20.p1 AtM1 Arabidopsis thaliana ... 48 0.011
gb|AF096373.1|T9A4 Arabidopsis thaliana BAC T9A4 46 0.042
emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long... 46 0.042
emb|AL049487.1|ATF28M11 Arabidopsis thaliana DNA chromosome... 46 0.042
emb|AL161516.2|ATCHRIV28 Arabidopsis thaliana DNA chromosom... 46 0.042
ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complet... 46 0.042
gb|T41909.1|T41909 5172 Lambda-PRL2 Arabidopsis thaliana cD... 44 0.16
gb|AI992941.1|AI992941 701495092 A. thaliana, Ohio State cl... 44 0.16
>gb|AY078949.1| Arabidopsis thaliana At1g04920/F13M7_7 mRNA, complete cds
Length = 3471
Score = 99.6 bits (50), Expect = 3e-018
Identities = 368/474 (77%)
Strand = Plus / Plus
Query: 965 tccaagagtttgtcgatggagcccttgcgcatatcctgaacatgtccaaggctctgggag 1024
||||||||||||| |||||||| | || || || || |||||||| || | | ||||||
Sbjct: 947 tccaagagtttgttgatggagctttagctcacattctaaacatgtcaaaagttttgggag 1006
Query: 1025 agcaggttggaaatgggaggccagtactgccttacgtgatacatgggcactatgccgatg 1084
||||| |||| || |||| ||| || ||| || ||||| ||||| || || || ||||
Sbjct: 1007 agcagattgggaaggggaagcctgtgtggccatatgtgattcatggacattacgcggatg 1066
Query: 1085 ctggagatgttgctgctctcctttctggtgcgctgaatgtgccaatggtgctcactggcc 1144
| || ||| ||| ||||| |||||||||||| |||| || || ||||| || || || |
Sbjct: 1067 caggggatagtgccgctctgctttctggtgcgttgaacgttcctatggtcctgacgggtc 1126
Query: 1145 actcacttgggaggaacaagctggaacaactgctgaagcaagggcgcatgtccaaggagg 1204
| || || || || |||||||| || || || |||| |||||| | || |||||||
Sbjct: 1127 attctctaggaagaaacaagcttgagcagcttttgaaacaagggaggcaatcaaaggagg 1186
Query: 1205 agatcgattcgacatacaagatcatgaggcgtatcgagggtgaggagctggccctggatg 1264
| || |||| ||||| ||||||| |||| | ||||||| |||||||| | |||||||
Sbjct: 1187 atataaattccacatataagatcaagaggaggatcgaggccgaggagctatctctggatg 1246
Query: 1265 cgtcagagcttgtaatcacgagcacaaggcaggagattgatgagcagtggggattgtacg 1324
| |||||||||| || || ||||| ||||||||||||||||| ||||||||| | || |
Sbjct: 1247 ctgcagagcttgttataacaagcacgaggcaggagattgatgaacagtggggactttatg 1306
Query: 1325 atggatttgatgtcaagcttgagaaagtgctgagggcacgggcgaggcgcggggttagct 1384
|||| || ||||| || || |||||||| |||| || || || || ||||| |||| |
Sbjct: 1307 atgggttcgatgtaaaactcgagaaagtcttgagagctcgtgctagacgcggtgttaatt 1366
Query: 1385 gccatggtcgttacatgcctaggatggtggtgattcctccgggaatggatttca 1438
|||| || | | |||||| || |||| ||| ||||||||||| ||||||||||
Sbjct: 1367 gccacggaaggttcatgccaagaatggcggttattcctccggggatggatttca 1420
Score = 79.8 bits (40), Expect = 3e-012
Identities = 103/124 (83%)
Strand = Plus / Plus
Query: 608 tctggtctgacgacaataaggagaagaagctttacattgtgctcatcagcgtgcatggtc 667
|||||||||| || || |||||||| |||||| |||| |||||||| |||||||
Sbjct: 587 tctggtctgatgataagaaggagaatcgtctttacgttgtcctcatcagtttgcatgggt 646
Query: 668 ttgttcgtggagaaaacatggaactaggtcgtgattctgatacaggtggccaggtgaaat 727
| |||||||||||||||||||| || ||| | ||||| ||||| ||||| ||||||||||
Sbjct: 647 tggttcgtggagaaaacatggagcttggtagcgattccgatactggtggacaggtgaaat 706
Query: 728 atgt 731
||||
Sbjct: 707 atgt 710
Score = 58.0 bits (29), Expect = 1e-005
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 1567 cctcacaagccgatgatcctggcgttatcaagaccagacccgaagaagaacat 1619
|||||||| || |||||| |||| ||||| ||||||||||| |||||||||||
Sbjct: 1552 cctcacaaacctatgatcttggcattatctagaccagacccaaagaagaacat 1604
Score = 58.0 bits (29), Expect = 1e-005
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 112 atggccgggaacgagtggatcaatgggtacctggaggcgatcctcgacagcca 164
||||| |||||||||||||| |||||||| |||||||||| || ||||||||
Sbjct: 109 atggcggggaacgagtggataaatgggtatttggaggcgattcttgacagcca 161
>gb|BT002210.1| Arabidopsis thaliana At1g04920/F13M7_7 mRNA, complete cds
Length = 3189
Score = 99.6 bits (50), Expect = 3e-018
Identities = 368/474 (77%)
Strand = Plus / Plus
Query: 965 tccaagagtttgtcgatggagcccttgcgcatatcctgaacatgtccaaggctctgggag 1024
||||||||||||| |||||||| | || || || || |||||||| || | | ||||||
Sbjct: 839 tccaagagtttgttgatggagctttagctcacattctaaacatgtcaaaagttttgggag 898
Query: 1025 agcaggttggaaatgggaggccagtactgccttacgtgatacatgggcactatgccgatg 1084
||||| |||| || |||| ||| || ||| || ||||| ||||| || || || ||||
Sbjct: 899 agcagattgggaaggggaagcctgtgtggccatatgtgattcatggacattacgcggatg 958
Query: 1085 ctggagatgttgctgctctcctttctggtgcgctgaatgtgccaatggtgctcactggcc 1144
| || ||| ||| ||||| |||||||||||| |||| || || ||||| || || || |
Sbjct: 959 caggggatagtgccgctctgctttctggtgcgttgaacgttcctatggtcctgacgggtc 1018
Query: 1145 actcacttgggaggaacaagctggaacaactgctgaagcaagggcgcatgtccaaggagg 1204
| || || || || |||||||| || || || |||| |||||| | || |||||||
Sbjct: 1019 attctctaggaagaaacaagcttgagcagcttttgaaacaagggaggcaatcaaaggagg 1078
Query: 1205 agatcgattcgacatacaagatcatgaggcgtatcgagggtgaggagctggccctggatg 1264
| || |||| ||||| ||||||| |||| | ||||||| |||||||| | |||||||
Sbjct: 1079 atataaattccacatataagatcaagaggaggatcgaggccgaggagctatctctggatg 1138
Query: 1265 cgtcagagcttgtaatcacgagcacaaggcaggagattgatgagcagtggggattgtacg 1324
| |||||||||| || || ||||| ||||||||||||||||| ||||||||| | || |
Sbjct: 1139 ctgcagagcttgttataacaagcacgaggcaggagattgatgaacagtggggactttatg 1198
Query: 1325 atggatttgatgtcaagcttgagaaagtgctgagggcacgggcgaggcgcggggttagct 1384
|||| || ||||| || || |||||||| |||| || || || || ||||| |||| |
Sbjct: 1199 atgggttcgatgtaaaactcgagaaagtcttgagagctcgtgctagacgcggtgttaatt 1258
Query: 1385 gccatggtcgttacatgcctaggatggtggtgattcctccgggaatggatttca 1438
|||| || | | |||||| || |||| ||| ||||||||||| ||||||||||
Sbjct: 1259 gccacggaaggttcatgccaagaatggcggttattcctccggggatggatttca 1312
Score = 79.8 bits (40), Expect = 3e-012
Identities = 103/124 (83%)
Strand = Plus / Plus
Query: 608 tctggtctgacgacaataaggagaagaagctttacattgtgctcatcagcgtgcatggtc 667
|||||||||| || || |||||||| |||||| |||| |||||||| |||||||
Sbjct: 479 tctggtctgatgataagaaggagaatcgtctttacgttgtcctcatcagtttgcatgggt 538
Query: 668 ttgttcgtggagaaaacatggaactaggtcgtgattctgatacaggtggccaggtgaaat 727
| |||||||||||||||||||| || ||| | ||||| ||||| ||||| ||||||||||
Sbjct: 539 tggttcgtggagaaaacatggagcttggtagcgattccgatactggtggacaggtgaaat 598
Query: 728 atgt 731
||||
Sbjct: 599 atgt 602
Score = 58.0 bits (29), Expect = 1e-005
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 1567 cctcacaagccgatgatcctggcgttatcaagaccagacccgaagaagaacat 1619
|||||||| || |||||| |||| ||||| ||||||||||| |||||||||||
Sbjct: 1444 cctcacaaacctatgatcttggcattatctagaccagacccaaagaagaacat 1496
Score = 58.0 bits (29), Expect = 1e-005
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 112 atggccgggaacgagtggatcaatgggtacctggaggcgatcctcgacagcca 164
||||| |||||||||||||| |||||||| |||||||||| || ||||||||
Sbjct: 1 atggcggggaacgagtggataaatgggtatttggaggcgattcttgacagcca 53
>ref|NM_100370.2| Arabidopsis thaliana transferase, transferring glycosyl groups
AT1G04920 mRNA, complete cds
Length = 3469
Score = 99.6 bits (50), Expect = 3e-018
Identities = 368/474 (77%)
Strand = Plus / Plus
Query: 965 tccaagagtttgtcgatggagcccttgcgcatatcctgaacatgtccaaggctctgggag 1024
||||||||||||| |||||||| | || || || || |||||||| || | | ||||||
Sbjct: 947 tccaagagtttgttgatggagctttagctcacattctaaacatgtcaaaagttttgggag 1006
Query: 1025 agcaggttggaaatgggaggccagtactgccttacgtgatacatgggcactatgccgatg 1084
||||| |||| || |||| ||| || ||| || ||||| ||||| || || || ||||
Sbjct: 1007 agcagattgggaaggggaagcctgtgtggccatatgtgattcatggacattacgcggatg 1066
Query: 1085 ctggagatgttgctgctctcctttctggtgcgctgaatgtgccaatggtgctcactggcc 1144
| || ||| ||| ||||| |||||||||||| |||| || || ||||| || || || |
Sbjct: 1067 caggggatagtgccgctctgctttctggtgcgttgaacgttcctatggtcctgacgggtc 1126
Query: 1145 actcacttgggaggaacaagctggaacaactgctgaagcaagggcgcatgtccaaggagg 1204
| || || || || |||||||| || || || |||| |||||| | || |||||||
Sbjct: 1127 attctctaggaagaaacaagcttgagcagcttttgaaacaagggaggcaatcaaaggagg 1186
Query: 1205 agatcgattcgacatacaagatcatgaggcgtatcgagggtgaggagctggccctggatg 1264
| || |||| ||||| ||||||| |||| | ||||||| |||||||| | |||||||
Sbjct: 1187 atataaattccacatataagatcaagaggaggatcgaggccgaggagctatctctggatg 1246
Query: 1265 cgtcagagcttgtaatcacgagcacaaggcaggagattgatgagcagtggggattgtacg 1324
| |||||||||| || || ||||| ||||||||||||||||| ||||||||| | || |
Sbjct: 1247 ctgcagagcttgttataacaagcacgaggcaggagattgatgaacagtggggactttatg 1306
Query: 1325 atggatttgatgtcaagcttgagaaagtgctgagggcacgggcgaggcgcggggttagct 1384
|||| || ||||| || || |||||||| |||| || || || || ||||| |||| |
Sbjct: 1307 atgggttcgatgtaaaactcgagaaagtcttgagagctcgtgctagacgcggtgttaatt 1366
Query: 1385 gccatggtcgttacatgcctaggatggtggtgattcctccgggaatggatttca 1438
|||| || | | |||||| || |||| ||| ||||||||||| ||||||||||
Sbjct: 1367 gccacggaaggttcatgccaagaatggcggttattcctccggggatggatttca 1420
Score = 79.8 bits (40), Expect = 3e-012
Identities = 103/124 (83%)
Strand = Plus / Plus
Query: 608 tctggtctgacgacaataaggagaagaagctttacattgtgctcatcagcgtgcatggtc 667
|||||||||| || || |||||||| |||||| |||| |||||||| |||||||
Sbjct: 587 tctggtctgatgataagaaggagaatcgtctttacgttgtcctcatcagtttgcatgggt 646
Query: 668 ttgttcgtggagaaaacatggaactaggtcgtgattctgatacaggtggccaggtgaaat 727
| |||||||||||||||||||| || ||| | ||||| ||||| ||||| ||||||||||
Sbjct: 647 tggttcgtggagaaaacatggagcttggtagcgattccgatactggtggacaggtgaaat 706
Query: 728 atgt 731
||||
Sbjct: 707 atgt 710
Score = 58.0 bits (29), Expect = 1e-005
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 1567 cctcacaagccgatgatcctggcgttatcaagaccagacccgaagaagaacat 1619
|||||||| || |||||| |||| ||||| ||||||||||| |||||||||||
Sbjct: 1552 cctcacaaacctatgatcttggcattatctagaccagacccaaagaagaacat 1604
Score = 58.0 bits (29), Expect = 1e-005
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 112 atggccgggaacgagtggatcaatgggtacctggaggcgatcctcgacagcca 164
||||| |||||||||||||| |||||||| |||||||||| || ||||||||
Sbjct: 109 atggcggggaacgagtggataaatgggtatttggaggcgattcttgacagcca 161
>gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm complete sequence
Length = 14221815
Score = 87.7 bits (44), Expect = 1e-014
Identities = 302/388 (77%)
Strand = Plus / Minus
Query: 965 tccaagagtttgtcgatggagcccttgcgcatatcctgaacatgtccaaggctctgggag 1024
||||||||||||| |||||||| | || || || || |||||||| || | | ||||||
Sbjct: 1394754 tccaagagtttgttgatggagctttagctcacattctaaacatgtcaaaagttttgggag 1394695
Query: 1025 agcaggttggaaatgggaggccagtactgccttacgtgatacatgggcactatgccgatg 1084
||||| |||| || |||| ||| || ||| || ||||| ||||| || || || ||||
Sbjct: 1394694 agcagattgggaaggggaagcctgtgtggccatatgtgattcatggacattacgcggatg 1394635
Query: 1085 ctggagatgttgctgctctcctttctggtgcgctgaatgtgccaatggtgctcactggcc 1144
| || ||| ||| ||||| |||||||||||| |||| || || ||||| || || || |
Sbjct: 1394634 caggggatagtgccgctctgctttctggtgcgttgaacgttcctatggtcctgacgggtc 1394575
Query: 1145 actcacttgggaggaacaagctggaacaactgctgaagcaagggcgcatgtccaaggagg 1204
| || || || || |||||||| || || || |||| |||||| | || |||||||
Sbjct: 1394574 attctctaggaagaaacaagcttgagcagcttttgaaacaagggaggcaatcaaaggagg 1394515
Query: 1205 agatcgattcgacatacaagatcatgaggcgtatcgagggtgaggagctggccctggatg 1264
| || |||| ||||| ||||||| |||| | ||||||| |||||||| | |||||||
Sbjct: 1394514 atataaattccacatataagatcaagaggaggatcgaggccgaggagctatctctggatg 1394455
Query: 1265 cgtcagagcttgtaatcacgagcacaaggcaggagattgatgagcagtggggattgtacg 1324
| |||||||||| || || ||||| ||||||||||||||||| ||||||||| | || |
Sbjct: 1394454 ctgcagagcttgttataacaagcacgaggcaggagattgatgaacagtggggactttatg 1394395
Query: 1325 atggatttgatgtcaagcttgagaaagt 1352
|||| || ||||| || || ||||||||
Sbjct: 1394394 atgggttcgatgtaaaactcgagaaagt 1394367
Score = 58.0 bits (29), Expect = 1e-005
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 112 atggccgggaacgagtggatcaatgggtacctggaggcgatcctcgacagcca 164
||||| |||||||||||||| |||||||| |||||||||| || ||||||||
Sbjct: 1395831 atggcggggaacgagtggataaatgggtatttggaggcgattcttgacagcca 1395779
Score = 58.0 bits (29), Expect = 1e-005
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 1567 cctcacaagccgatgatcctggcgttatcaagaccagacccgaagaagaacat 1619
|||||||| || |||||| |||| ||||| ||||||||||| |||||||||||
Sbjct: 1393981 cctcacaaacctatgatcttggcattatctagaccagacccaaagaagaacat 1393929
Score = 50.1 bits (25), Expect = 0.003
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 670 gttcgtggagaaaacatggaactaggtcgtgattctgatacaggtggccaggt 722
|||||||||||||||||||| || ||| | ||||| ||||| ||||| |||||
Sbjct: 1395133 gttcgtggagaaaacatggagcttggtagcgattccgatactggtggacaggt 1395081
>gb|AC004809.1|F13M7 Arabidopsis thaliana chromosome 1 BAC F13M7 sequence, complete sequence
Length = 89713
Score = 87.7 bits (44), Expect = 1e-014
Identities = 302/388 (77%)
Strand = Plus / Plus
Query: 965 tccaagagtttgtcgatggagcccttgcgcatatcctgaacatgtccaaggctctgggag 1024
||||||||||||| |||||||| | || || || || |||||||| || | | ||||||
Sbjct: 27916 tccaagagtttgttgatggagctttagctcacattctaaacatgtcaaaagttttgggag 27975
Query: 1025 agcaggttggaaatgggaggccagtactgccttacgtgatacatgggcactatgccgatg 1084
||||| |||| || |||| ||| || ||| || ||||| ||||| || || || ||||
Sbjct: 27976 agcagattgggaaggggaagcctgtgtggccatatgtgattcatggacattacgcggatg 28035
Query: 1085 ctggagatgttgctgctctcctttctggtgcgctgaatgtgccaatggtgctcactggcc 1144
| || ||| ||| ||||| |||||||||||| |||| || || ||||| || || || |
Sbjct: 28036 caggggatagtgccgctctgctttctggtgcgttgaacgttcctatggtcctgacgggtc 28095
Query: 1145 actcacttgggaggaacaagctggaacaactgctgaagcaagggcgcatgtccaaggagg 1204
| || || || || |||||||| || || || |||| |||||| | || |||||||
Sbjct: 28096 attctctaggaagaaacaagcttgagcagcttttgaaacaagggaggcaatcaaaggagg 28155
Query: 1205 agatcgattcgacatacaagatcatgaggcgtatcgagggtgaggagctggccctggatg 1264
| || |||| ||||| ||||||| |||| | ||||||| |||||||| | |||||||
Sbjct: 28156 atataaattccacatataagatcaagaggaggatcgaggccgaggagctatctctggatg 28215
Query: 1265 cgtcagagcttgtaatcacgagcacaaggcaggagattgatgagcagtggggattgtacg 1324
| |||||||||| || || ||||| ||||||||||||||||| ||||||||| | || |
Sbjct: 28216 ctgcagagcttgttataacaagcacgaggcaggagattgatgaacagtggggactttatg 28275
Query: 1325 atggatttgatgtcaagcttgagaaagt 1352
|||| || ||||| || || ||||||||
Sbjct: 28276 atgggttcgatgtaaaactcgagaaagt 28303
Score = 58.0 bits (29), Expect = 1e-005
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 1567 cctcacaagccgatgatcctggcgttatcaagaccagacccgaagaagaacat 1619
|||||||| || |||||| |||| ||||| ||||||||||| |||||||||||
Sbjct: 28689 cctcacaaacctatgatcttggcattatctagaccagacccaaagaagaacat 28741
Score = 58.0 bits (29), Expect = 1e-005
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 112 atggccgggaacgagtggatcaatgggtacctggaggcgatcctcgacagcca 164
||||| |||||||||||||| |||||||| |||||||||| || ||||||||
Sbjct: 26839 atggcggggaacgagtggataaatgggtatttggaggcgattcttgacagcca 26891
Score = 50.1 bits (25), Expect = 0.003
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 670 gttcgtggagaaaacatggaactaggtcgtgattctgatacaggtggccaggt 722
|||||||||||||||||||| || ||| | ||||| ||||| ||||| |||||
Sbjct: 27537 gttcgtggagaaaacatggagcttggtagcgattccgatactggtggacaggt 27589
>ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complete sequence
Length = 30432563
Score = 87.7 bits (44), Expect = 1e-014
Identities = 302/388 (77%)
Strand = Plus / Minus
Query: 965 tccaagagtttgtcgatggagcccttgcgcatatcctgaacatgtccaaggctctgggag 1024
||||||||||||| |||||||| | || || || || |||||||| || | | ||||||
Sbjct: 1394678 tccaagagtttgttgatggagctttagctcacattctaaacatgtcaaaagttttgggag 1394619
Query: 1025 agcaggttggaaatgggaggccagtactgccttacgtgatacatgggcactatgccgatg 1084
||||| |||| || |||| ||| || ||| || ||||| ||||| || || || ||||
Sbjct: 1394618 agcagattgggaaggggaagcctgtgtggccatatgtgattcatggacattacgcggatg 1394559
Query: 1085 ctggagatgttgctgctctcctttctggtgcgctgaatgtgccaatggtgctcactggcc 1144
| || ||| ||| ||||| |||||||||||| |||| || || ||||| || || || |
Sbjct: 1394558 caggggatagtgccgctctgctttctggtgcgttgaacgttcctatggtcctgacgggtc 1394499
Query: 1145 actcacttgggaggaacaagctggaacaactgctgaagcaagggcgcatgtccaaggagg 1204
| || || || || |||||||| || || || |||| |||||| | || |||||||
Sbjct: 1394498 attctctaggaagaaacaagcttgagcagcttttgaaacaagggaggcaatcaaaggagg 1394439
Query: 1205 agatcgattcgacatacaagatcatgaggcgtatcgagggtgaggagctggccctggatg 1264
| || |||| ||||| ||||||| |||| | ||||||| |||||||| | |||||||
Sbjct: 1394438 atataaattccacatataagatcaagaggaggatcgaggccgaggagctatctctggatg 1394379
Query: 1265 cgtcagagcttgtaatcacgagcacaaggcaggagattgatgagcagtggggattgtacg 1324
| |||||||||| || || ||||| ||||||||||||||||| ||||||||| | || |
Sbjct: 1394378 ctgcagagcttgttataacaagcacgaggcaggagattgatgaacagtggggactttatg 1394319
Query: 1325 atggatttgatgtcaagcttgagaaagt 1352
|||| || ||||| || || ||||||||
Sbjct: 1394318 atgggttcgatgtaaaactcgagaaagt 1394291
Score = 58.0 bits (29), Expect = 1e-005
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 112 atggccgggaacgagtggatcaatgggtacctggaggcgatcctcgacagcca 164
||||| |||||||||||||| |||||||| |||||||||| || ||||||||
Sbjct: 1395755 atggcggggaacgagtggataaatgggtatttggaggcgattcttgacagcca 1395703
Score = 58.0 bits (29), Expect = 1e-005
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 1567 cctcacaagccgatgatcctggcgttatcaagaccagacccgaagaagaacat 1619
|||||||| || |||||| |||| ||||| ||||||||||| |||||||||||
Sbjct: 1393905 cctcacaaacctatgatcttggcattatctagaccagacccaaagaagaacat 1393853
Score = 50.1 bits (25), Expect = 0.003
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 670 gttcgtggagaaaacatggaactaggtcgtgattctgatacaggtggccaggt 722
|||||||||||||||||||| || ||| | ||||| ||||| ||||| |||||
Sbjct: 1395057 gttcgtggagaaaacatggagcttggtagcgattccgatactggtggacaggt 1395005
>gb|AV828637.1|AV828637 AV828637 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-31-D03 5',
mRNA sequence
Length = 386
Score = 83.8 bits (42), Expect = 2e-013
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 673 cgtggagaaaacatggaactaggtcgtgattctgatacaggtggccaggtgaaatatgtg 732
||||| ||||||||||| || ||||| ||||||||||| |||||||||||||| |||||
Sbjct: 115 cgtggtgaaaacatggagcttggtcgcgattctgatactggtggccaggtgaagtatgtt 174
Query: 733 gtcgaacttgcaag 746
|| |||||||||||
Sbjct: 175 gtggaacttgcaag 188
>gb|AY069868.1| Arabidopsis thaliana AT5g11110/T5K6_100 mRNA, complete cds
Length = 2803
Score = 83.8 bits (42), Expect = 2e-013
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 673 cgtggagaaaacatggaactaggtcgtgattctgatacaggtggccaggtgaaatatgtg 732
||||| ||||||||||| || ||||| ||||||||||| |||||||||||||| |||||
Sbjct: 115 cgtggtgaaaacatggagcttggtcgcgattctgatactggtggccaggtgaagtatgtt 174
Query: 733 gtcgaacttgcaag 746
|| |||||||||||
Sbjct: 175 gtggaacttgcaag 188
>gb|BT002697.1| Arabidopsis thaliana At5g11110/T5K6_100 gene, complete cds
Length = 2685
Score = 83.8 bits (42), Expect = 2e-013
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 673 cgtggagaaaacatggaactaggtcgtgattctgatacaggtggccaggtgaaatatgtg 732
||||| ||||||||||| || ||||| ||||||||||| |||||||||||||| |||||
Sbjct: 100 cgtggtgaaaacatggagcttggtcgcgattctgatactggtggccaggtgaagtatgtt 159
Query: 733 gtcgaacttgcaag 746
|| |||||||||||
Sbjct: 160 gtggaacttgcaag 173
>ref|NM_121149.3| Arabidopsis thaliana unknown protein AT5G11110 mRNA, complete cds
Length = 3576
Score = 83.8 bits (42), Expect = 2e-013
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 673 cgtggagaaaacatggaactaggtcgtgattctgatacaggtggccaggtgaaatatgtg 732
||||| ||||||||||| || ||||| ||||||||||| |||||||||||||| |||||
Sbjct: 759 cgtggtgaaaacatggagcttggtcgcgattctgatactggtggccaggtgaagtatgtt 818
Query: 733 gtcgaacttgcaag 746
|| |||||||||||
Sbjct: 819 gtggaacttgcaag 832
>dbj|AK175938.1| Arabidopsis thaliana mRNA for sucrose-phosphate synthase - like
protein, complete cds, clone: RAFL22-62-A14
Length = 3438
Score = 69.9 bits (35), Expect = 3e-009
Identities = 80/95 (84%)
Strand = Plus / Plus
Query: 637 ctttacattgtgctcatcagcgtgcatggtcttgttcgtggagaaaacatggaactaggt 696
||||||||||| | |||||| ||||||| || || ||||||||||||||||| || ||
Sbjct: 736 ctttacattgtcttaatcagcatgcatggactcgtgcgtggagaaaacatggagcttgga 795
Query: 697 cgtgattctgatacaggtggccaggtgaaatatgt 731
| || |||||||| ||||| ||||||||||||||
Sbjct: 796 agagactctgatactggtgggcaggtgaaatatgt 830
Score = 48.1 bits (24), Expect = 0.011
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 1843 gccaaaatgaagggcgtcttcatcaaccctgctctcgttgagccgtttggtctcac 1898
||||||| ||||| || |||||||| || ||||| || |||||||||||||||||
Sbjct: 1930 gccaaaactaagggggttttcatcaatccagctctggtggagccgtttggtctcac 1985
>dbj|AK220698.1| Arabidopsis thaliana mRNA for sucrose-phosphate synthase - like
protein, complete cds, clone: RAFL21-92-G10
Length = 3462
Score = 69.9 bits (35), Expect = 3e-009
Identities = 80/95 (84%)
Strand = Plus / Plus
Query: 637 ctttacattgtgctcatcagcgtgcatggtcttgttcgtggagaaaacatggaactaggt 696
||||||||||| | |||||| ||||||| || || ||||||||||||||||| || ||
Sbjct: 748 ctttacattgtcttaatcagcatgcatggactcgtgcgtggagaaaacatggagcttgga 807
Query: 697 cgtgattctgatacaggtggccaggtgaaatatgt 731
| || |||||||| ||||| ||||||||||||||
Sbjct: 808 agagactctgatactggtgggcaggtgaaatatgt 842
Score = 48.1 bits (24), Expect = 0.011
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 1843 gccaaaatgaagggcgtcttcatcaaccctgctctcgttgagccgtttggtctcac 1898
||||||| ||||| || |||||||| || ||||| || |||||||||||||||||
Sbjct: 1941 gccaaaactaagggggttttcatcaatccagctctggtggagccgtttggtctcac 1996
>dbj|AK220923.1| Arabidopsis thaliana mRNA for sucrose-phosphate synthase - like
protein, complete cds, clone: RAFL22-49-M07
Length = 3438
Score = 69.9 bits (35), Expect = 3e-009
Identities = 80/95 (84%)
Strand = Plus / Plus
Query: 637 ctttacattgtgctcatcagcgtgcatggtcttgttcgtggagaaaacatggaactaggt 696
||||||||||| | |||||| ||||||| || || ||||||||||||||||| || ||
Sbjct: 736 ctttacattgtcttaatcagcatgcatggactcgtgcgtggagaaaacatggagcttgga 795
Query: 697 cgtgattctgatacaggtggccaggtgaaatatgt 731
| || |||||||| ||||| ||||||||||||||
Sbjct: 796 agagactctgatactggtgggcaggtgaaatatgt 830
>dbj|AK221092.1| Arabidopsis thaliana mRNA for sucrose-phosphate synthase - like
protein, complete cds, clone: RAFL22-83-J09
Length = 3438
Score = 69.9 bits (35), Expect = 3e-009
Identities = 80/95 (84%)
Strand = Plus / Plus
Query: 637 ctttacattgtgctcatcagcgtgcatggtcttgttcgtggagaaaacatggaactaggt 696
||||||||||| | |||||| ||||||| || || ||||||||||||||||| || ||
Sbjct: 736 ctttacattgtcttaatcagcatgcatggactcgtgcgtggagaaaacatggagcttgga 795
Query: 697 cgtgattctgatacaggtggccaggtgaaatatgt 731
| || |||||||| ||||| ||||||||||||||
Sbjct: 796 agagactctgatactggtgggcaggtgaaatatgt 830
>ref|NM_001036532.1| Arabidopsis thaliana unknown protein AT4G10120 transcript variant
AT4G10120.2 mRNA, complete cds
Length = 3468
Score = 69.9 bits (35), Expect = 3e-009
Identities = 80/95 (84%)
Strand = Plus / Plus
Query: 637 ctttacattgtgctcatcagcgtgcatggtcttgttcgtggagaaaacatggaactaggt 696
||||||||||| | |||||| ||||||| || || ||||||||||||||||| || ||
Sbjct: 747 ctttacattgtcttaatcagcatgcatggactcgtgcgtggagaaaacatggagcttgga 806
Query: 697 cgtgattctgatacaggtggccaggtgaaatatgt 731
| || |||||||| ||||| ||||||||||||||
Sbjct: 807 agagactctgatactggtgggcaggtgaaatatgt 841
Score = 48.1 bits (24), Expect = 0.011
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 1843 gccaaaatgaagggcgtcttcatcaaccctgctctcgttgagccgtttggtctcac 1898
||||||| ||||| || |||||||| || ||||| || |||||||||||||||||
Sbjct: 1941 gccaaaactaagggggttttcatcaatccagctctggtggagccgtttggtctcac 1996
>ref|NM_117080.4| Arabidopsis thaliana transferase, transferring glycosyl groups
AT4G10120 transcript variant AT4G10120.1 mRNA, complete
cds
Length = 3457
Score = 69.9 bits (35), Expect = 3e-009
Identities = 80/95 (84%)
Strand = Plus / Plus
Query: 637 ctttacattgtgctcatcagcgtgcatggtcttgttcgtggagaaaacatggaactaggt 696
||||||||||| | |||||| ||||||| || || ||||||||||||||||| || ||
Sbjct: 736 ctttacattgtcttaatcagcatgcatggactcgtgcgtggagaaaacatggagcttgga 795
Query: 697 cgtgattctgatacaggtggccaggtgaaatatgt 731
| || |||||||| ||||| ||||||||||||||
Sbjct: 796 agagactctgatactggtgggcaggtgaaatatgt 830
Score = 48.1 bits (24), Expect = 0.011
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 1843 gccaaaatgaagggcgtcttcatcaaccctgctctcgttgagccgtttggtctcac 1898
||||||| ||||| || |||||||| || ||||| || |||||||||||||||||
Sbjct: 1930 gccaaaactaagggggttttcatcaatccagctctggtggagccgtttggtctcac 1985
>gb|B61821.1|B61821 T19E10TF TAMU Arabidopsis thaliana genomic clone T19E10, DNA
sequence
Length = 448
Score = 60.0 bits (30), Expect = 3e-006
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 673 cgtggagaaaacatggaactaggtcgtgattctgatacaggtggccaggt 722
||||| ||||||||||| || ||||| ||||||||||| |||||||||||
Sbjct: 131 cgtggtgaaaacatggagcttggtcgcgattctgatactggtggccaggt 180
>gb|BP796512.1|BP796512 BP796512 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-11-A12 5',
mRNA sequence
Length = 637
Score = 60.0 bits (30), Expect = 3e-006
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 673 cgtggagaaaacatggaactaggtcgtgattctgatacaggtggccaggtgaa 725
||||| ||||||||||| || || || ||||||||||| ||||||||||||||
Sbjct: 541 cgtggtgaaaacatggagcttggncgcgattctgatactggtggccaggtgaa 593
>emb|CQ805456.1| Sequence 1867 from Patent WO2004035798
Length = 3252
Score = 60.0 bits (30), Expect = 3e-006
Identities = 66/78 (84%)
Strand = Plus / Plus
Query: 654 cagcgtgcatggtcttgttcgtggagaaaacatggaactaggtcgtgattctgatacagg 713
|||| ||||||| || || ||||||||||||||||| || || | || |||||||| ||
Sbjct: 699 cagcatgcatggactcgtgcgtggagaaaacatggagcttggaagagactctgatactgg 758
Query: 714 tggccaggtgaaatatgt 731
||| ||||||||||||||
Sbjct: 759 tgggcaggtgaaatatgt 776
Score = 48.1 bits (24), Expect = 0.011
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 1843 gccaaaatgaagggcgtcttcatcaaccctgctctcgttgagccgtttggtctcac 1898
||||||| ||||| || |||||||| || ||||| || |||||||||||||||||
Sbjct: 1876 gccaaaactaagggggttttcatcaatccagctctggtggagccgtttggtctcac 1931
>dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, complete sequence
Length = 23810767
Score = 60.0 bits (30), Expect = 3e-006
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 673 cgtggagaaaacatggaactaggtcgtgattctgatacaggtggccaggt 722
||||| ||||||||||| || ||||| ||||||||||| |||||||||||
Sbjct: 3350258 cgtggtgaaaacatggagcttggtcgcgattctgatactggtggccaggt 3350307
Score = 54.0 bits (27), Expect = 2e-004
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 1747 gttctgaagctgattgacaagtatgatctgtacgg 1781
||||||||||| ||||||||||||||||| |||||
Sbjct: 6561289 gttctgaagctaattgacaagtatgatctctacgg 6561255
Score = 50.1 bits (25), Expect = 0.003
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 1294 caggagattgatgagcagtggggattgtacgatggatttga 1334
||||||||||||||||| ||| || |||| |||||||||||
Sbjct: 6562285 caggagattgatgagcaatggagactgtatgatggatttga 6562245
>emb|AL360314.1|ATF2I11 Arabidopsis thaliana DNA chromosome 5, BAC clone F2I11 (ESSA
project)
Length = 110992
Score = 60.0 bits (30), Expect = 3e-006
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 673 cgtggagaaaacatggaactaggtcgtgattctgatacaggtggccaggt 722
||||| ||||||||||| || ||||| ||||||||||| |||||||||||
Sbjct: 49 cgtggtgaaaacatggagcttggtcgcgattctgatactggtggccaggt 98
>emb|AL391222.1|ATT5K6 Arabidopsis thaliana DNA chromosome 5, BAC clone T5K6 (ESSA project)
Length = 96379
Score = 60.0 bits (30), Expect = 3e-006
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 673 cgtggagaaaacatggaactaggtcgtgattctgatacaggtggccaggt 722
||||| ||||||||||| || ||||| ||||||||||| |||||||||||
Sbjct: 88428 cgtggtgaaaacatggagcttggtcgcgattctgatactggtggccaggt 88477
>ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complete sequence
Length = 26992728
Score = 60.0 bits (30), Expect = 3e-006
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 673 cgtggagaaaacatggaactaggtcgtgattctgatacaggtggccaggt 722
||||| ||||||||||| || ||||| ||||||||||| |||||||||||
Sbjct: 3537289 cgtggtgaaaacatggagcttggtcgcgattctgatactggtggccaggt 3537338
Score = 54.0 bits (27), Expect = 2e-004
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 1747 gttctgaagctgattgacaagtatgatctgtacgg 1781
||||||||||| ||||||||||||||||| |||||
Sbjct: 6846965 gttctgaagctaattgacaagtatgatctctacgg 6846931
Score = 50.1 bits (25), Expect = 0.003
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 1294 caggagattgatgagcagtggggattgtacgatggatttga 1334
||||||||||||||||| ||| || |||| |||||||||||
Sbjct: 6847961 caggagattgatgagcaatggagactgtatgatggatttga 6847921
>gb|AQ955203.1|AQ955203 LERAB94TF LERA Arabidopsis thaliana genomic clone LERAB94, DNA
sequence
Length = 642
Score = 58.0 bits (29), Expect = 1e-005
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 112 atggccgggaacgagtggatcaatgggtacctggaggcgatcctcgacagcca 164
||||| |||||||||||||| |||||||| |||||||||| || ||||||||
Sbjct: 61 atggcggggaacgagtggataaatgggtatttggaggcgattcttgacagcca 113
>gb|BH213651.1|BH213651 SALK_009524 Arabidopsis thaliana TDNA insertion lines Arabidopsis
thaliana genomic clone SALK_009524, DNA sequence
Length = 439
Score = 58.0 bits (29), Expect = 1e-005
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 112 atggccgggaacgagtggatcaatgggtacctggaggcgatcctcgacagcca 164
||||| |||||||||||||| |||||||| |||||||||| || ||||||||
Sbjct: 327 atggcggggaacgagtggataaatgggtatttggaggcgattcttgacagcca 379
>gb|CB257846.1|CB257846 44-E011804-014-004-H12-T7R MPIZ-ADIS-014 Arabidopsis thaliana cDNA
clone MPIZp771H124Q 5-PRIME, mRNA sequence
Length = 625
Score = 54.0 bits (27), Expect = 2e-004
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 1276 gtaatcacgagcacaaggcaggagattgatgagcagtggggattgtacgatggatttga 1334
||||| || |||||| | ||||||||||||||||| ||| || |||| |||||||||||
Sbjct: 271 gtaataactagcacacgacaggagattgatgagcaatggagactgtatgatggatttga 329
>gb|CB261138.1|CB261138 27-E9407-012-002-E16-t7r MPIZ-ADIS-012 Arabidopsis thaliana cDNA
clone MPIZp769E162Q 5-PRIME, mRNA sequence
Length = 571
Score = 54.0 bits (27), Expect = 2e-004
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 1747 gttctgaagctgattgacaagtatgatctgtacgg 1781
||||||||||| ||||||||||||||||| |||||
Sbjct: 1 gttctgaagctaattgacaagtatgatctctacgg 35
>gb|AF296825.1|F5O24 Arabidopsis thaliana BAC F5O24
Length = 101458
Score = 54.0 bits (27), Expect = 2e-004
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 1747 gttctgaagctgattgacaagtatgatctgtacgg 1781
||||||||||| ||||||||||||||||| |||||
Sbjct: 51366 gttctgaagctaattgacaagtatgatctctacgg 51332
Score = 50.1 bits (25), Expect = 0.003
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 1294 caggagattgatgagcagtggggattgtacgatggatttga 1334
||||||||||||||||| ||| || |||| |||||||||||
Sbjct: 52362 caggagattgatgagcaatggagactgtatgatggatttga 52322
>gb|AY039911.1| Arabidopsis thaliana putative sucrose-phosphate synthase (At5g20280)
mRNA, complete cds
Length = 3494
Score = 54.0 bits (27), Expect = 2e-004
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 1747 gttctgaagctgattgacaagtatgatctgtacgg 1781
||||||||||| ||||||||||||||||| |||||
Sbjct: 1666 gttctgaagctaattgacaagtatgatctctacgg 1700
Score = 50.1 bits (25), Expect = 0.003
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 1294 caggagattgatgagcagtggggattgtacgatggatttga 1334
||||||||||||||||| ||| || |||| |||||||||||
Sbjct: 1231 caggagattgatgagcaatggagactgtatgatggatttga 1271
Score = 48.1 bits (24), Expect = 0.011
Identities = 60/72 (83%)
Strand = Plus / Plus
Query: 673 cgtggagaaaacatggaactaggtcgtgattctgatacaggtggccaggtgaaatatgtg 732
||||| ||||||||||| || || || || ||||| || ||||| ||||| ||||||||
Sbjct: 604 cgtggtgaaaacatggagctcggccgcgactctgacaccggtggacaggttaaatatgtt 663
Query: 733 gtcgaacttgca 744
|| |||||||||
Sbjct: 664 gtggaacttgca 675
>gb|AY079334.1| Arabidopsis thaliana putative sucrose-phosphate synthase (At5g20280)
mRNA, complete cds
Length = 3163
Score = 54.0 bits (27), Expect = 2e-004
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 1747 gttctgaagctgattgacaagtatgatctgtacgg 1781
||||||||||| ||||||||||||||||| |||||
Sbjct: 1600 gttctgaagctaattgacaagtatgatctctacgg 1634
Score = 50.1 bits (25), Expect = 0.003
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 1294 caggagattgatgagcagtggggattgtacgatggatttga 1334
||||||||||||||||| ||| || |||| |||||||||||
Sbjct: 1165 caggagattgatgagcaatggagactgtatgatggatttga 1205
Score = 48.1 bits (24), Expect = 0.011
Identities = 60/72 (83%)
Strand = Plus / Plus
Query: 673 cgtggagaaaacatggaactaggtcgtgattctgatacaggtggccaggtgaaatatgtg 732
||||| ||||||||||| || || || || ||||| || ||||| ||||| ||||||||
Sbjct: 538 cgtggtgaaaacatggagctcggccgcgactctgacaccggtggacaggttaaatatgtt 597
Query: 733 gtcgaacttgca 744
|| |||||||||
Sbjct: 598 gtggaacttgca 609
>emb|CQ805578.1| Sequence 1989 from Patent WO2004035798
Length = 3132
Score = 54.0 bits (27), Expect = 2e-004
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 1747 gttctgaagctgattgacaagtatgatctgtacgg 1781
||||||||||| ||||||||||||||||| |||||
Sbjct: 1600 gttctgaagctaattgacaagtatgatctctacgg 1634
Score = 50.1 bits (25), Expect = 0.003
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 1294 caggagattgatgagcagtggggattgtacgatggatttga 1334
||||||||||||||||| ||| || |||| |||||||||||
Sbjct: 1165 caggagattgatgagcaatggagactgtatgatggatttga 1205
Score = 48.1 bits (24), Expect = 0.011
Identities = 60/72 (83%)
Strand = Plus / Plus
Query: 673 cgtggagaaaacatggaactaggtcgtgattctgatacaggtggccaggtgaaatatgtg 732
||||| ||||||||||| || || || || ||||| || ||||| ||||| ||||||||
Sbjct: 538 cgtggtgaaaacatggagctcggccgcgactctgacaccggtggacaggttaaatatgtt 597
Query: 733 gtcgaacttgca 744
|| |||||||||
Sbjct: 598 gtggaacttgca 609
>ref|NM_122035.1| Arabidopsis thaliana transferase, transferring glycosyl groups
AT5G20280 mRNA, complete cds
Length = 3478
Score = 54.0 bits (27), Expect = 2e-004
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 1747 gttctgaagctgattgacaagtatgatctgtacgg 1781
||||||||||| ||||||||||||||||| |||||
Sbjct: 1666 gttctgaagctaattgacaagtatgatctctacgg 1700
Score = 50.1 bits (25), Expect = 0.003
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 1294 caggagattgatgagcagtggggattgtacgatggatttga 1334
||||||||||||||||| ||| || |||| |||||||||||
Sbjct: 1231 caggagattgatgagcaatggagactgtatgatggatttga 1271
Score = 48.1 bits (24), Expect = 0.011
Identities = 60/72 (83%)
Strand = Plus / Plus
Query: 673 cgtggagaaaacatggaactaggtcgtgattctgatacaggtggccaggtgaaatatgtg 732
||||| ||||||||||| || || || || ||||| || ||||| ||||| ||||||||
Sbjct: 604 cgtggtgaaaacatggagctcggccgcgactctgacaccggtggacaggttaaatatgtt 663
Query: 733 gtcgaacttgca 744
|| |||||||||
Sbjct: 664 gtggaacttgca 675
>gb|AV827809.1|AV827809 AV827809 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-20-D09 5',
mRNA sequence
Length = 202
Score = 52.0 bits (26), Expect = 7e-004
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 112 atggccgggaacgagtggatcaatgggtacctggaggcgatcctcgacagcca 164
||||| |||||||||||||| ||||||| |||||||||| || ||||||||
Sbjct: 110 atggcggggaacgagtggataaatgggtntttggaggcgattcttgacagcca 162
>gb|AQ955204.1|AQ955204 LERAB94TR LERA Arabidopsis thaliana genomic clone LERAB94, DNA
sequence
Length = 800
Score = 50.1 bits (25), Expect = 0.003
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 670 gttcgtggagaaaacatggaactaggtcgtgattctgatacaggtggccaggt 722
|||||||||||||||||||| || ||| | ||||| ||||| ||||| |||||
Sbjct: 145 gttcgtggagaaaacatggagcttggtagcgattccgatactggtggacaggt 93
>gb|AV529117.1|AV529117 AV529117 Arabidopsis thaliana aboveground organs two to six-week old
Arabidopsis thaliana cDNA clone APZL27g06R 5', mRNA
sequence
Length = 539
Score = 50.1 bits (25), Expect = 0.003
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 1294 caggagattgatgagcagtggggattgtacgatggatttga 1334
||||||||||||||||| ||| || |||| |||||||||||
Sbjct: 461 caggagattgatgagcaatggagactgtatgatggatttga 501
>gb|CB185840.1|CB185840 EST01031 Arabidopsis virulent Pseudomonas syringae subtracted library
Arabidopsis thaliana cDNA clone DC2-F4 similar to
sucrose-phosphate synthase-like protein, mRNA sequence
Length = 530
Score = 48.1 bits (24), Expect = 0.011
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 1843 gccaaaatgaagggcgtcttcatcaaccctgctctcgttgagccgtttggtctcac 1898
||||||| ||||| || |||||||| || ||||| || |||||||||||||||||
Sbjct: 452 gccaaaactaagggggttttcatcaatccagctctggtggagccgtttggtctcac 397
>gb|AV528430.1|AV528430 AV528430 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APZL08g12R 5', mRNA
sequence
Length = 573
Score = 48.1 bits (24), Expect = 0.011
Identities = 60/72 (83%)
Strand = Plus / Plus
Query: 673 cgtggagaaaacatggaactaggtcgtgattctgatacaggtggccaggtgaaatatgtg 732
||||| ||||||||||| || || || || ||||| || ||||| ||||| ||||||||
Sbjct: 249 cgtggtgaaaacatggagctcggccgcgactctgacaccggtggacaggttaaatatgtt 308
Query: 733 gtcgaacttgca 744
|| |||||||||
Sbjct: 309 gtggaacttgca 320
>gb|CK121516.1|CK121516 202n20.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011N20202
5-PRIME, mRNA sequence
Length = 791
Score = 48.1 bits (24), Expect = 0.011
Identities = 60/72 (83%)
Strand = Plus / Plus
Query: 673 cgtggagaaaacatggaactaggtcgtgattctgatacaggtggccaggtgaaatatgtg 732
||||| ||||||||||| || || || || ||||| || ||||| ||||| ||||||||
Sbjct: 635 cgtggtgaaaacatggagctcggccgcgactctgacaccggtggacaggttaaatatgtt 694
Query: 733 gtcgaacttgca 744
|| |||||||||
Sbjct: 695 gtggaacttgca 706
>gb|AF096373.1|T9A4 Arabidopsis thaliana BAC T9A4
Length = 83922
Score = 46.1 bits (23), Expect = 0.042
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 1852 aagggcgtcttcatcaaccctgctctcgttgagccgtttggtctcac 1898
||||| || |||||||| || ||||| || |||||||||||||||||
Sbjct: 83329 aagggggttttcatcaatccagctctggtggagccgtttggtctcac 83283
>emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long arm
Length = 14497843
Score = 46.1 bits (23), Expect = 0.042
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 1852 aagggcgtcttcatcaaccctgctctcgttgagccgtttggtctcac 1898
||||| || |||||||| || ||||| || |||||||||||||||||
Sbjct: 2230777 aagggggttttcatcaatccagctctggtggagccgtttggtctcac 2230823
>emb|AL049487.1|ATF28M11 Arabidopsis thaliana DNA chromosome 4, BAC clone F28M11 (ESSA project)
Length = 85907
Score = 46.1 bits (23), Expect = 0.042
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 1852 aagggcgtcttcatcaaccctgctctcgttgagccgtttggtctcac 1898
||||| || |||||||| || ||||| || |||||||||||||||||
Sbjct: 44923 aagggggttttcatcaatccagctctggtggagccgtttggtctcac 44969
>emb|AL161516.2|ATCHRIV28 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 28
Length = 198005
Score = 46.1 bits (23), Expect = 0.042
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 1852 aagggcgtcttcatcaaccctgctctcgttgagccgtttggtctcac 1898
||||| || |||||||| || ||||| || |||||||||||||||||
Sbjct: 143284 aagggggttttcatcaatccagctctggtggagccgtttggtctcac 143330
>ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complete sequence
Length = 18585042
Score = 46.1 bits (23), Expect = 0.042
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 1852 aagggcgtcttcatcaaccctgctctcgttgagccgtttggtctcac 1898
||||| || |||||||| || ||||| || |||||||||||||||||
Sbjct: 6318046 aagggggttttcatcaatccagctctggtggagccgtttggtctcac 6318092
>gb|T41909.1|T41909 5172 Lambda-PRL2 Arabidopsis thaliana cDNA clone 109I5T7, mRNA
sequence
Length = 432
Score = 44.1 bits (22), Expect = 0.16
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 1752 gaagctgattgacaagtatgatctgtacgg 1781
|||||| ||||||||||||||||| |||||
Sbjct: 1 gaagctaattgacaagtatgatctctacgg 30
>gb|AI992941.1|AI992941 701495092 A. thaliana, Ohio State clone set Arabidopsis thaliana cDNA
clone 701495092, mRNA sequence
Length = 482
Score = 44.1 bits (22), Expect = 0.16
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 1752 gaagctgattgacaagtatgatctgtacgg 1781
|||||| ||||||||||||||||| |||||
Sbjct: 1 gaagctaattgacaagtatgatctctacgg 30
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,553,140
Number of Sequences: 1013581
Number of extensions: 1553140
Number of successful extensions: 101494
Number of sequences better than 0.5: 45
Number of HSP's better than 0.5 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 97161
Number of HSP's gapped (non-prelim): 4319
length of query: 3527
length of database: 908,940,872
effective HSP length: 21
effective length of query: 3506
effective length of database: 887,655,671
effective search space: 3112120782526
effective search space used: 3112120782526
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)